Psyllid ID: psy5568
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 685 | 2.2.26 [Sep-21-2011] | |||||||
| Q54JC8 | 1355 | Phosphoribosylformylglyci | yes | N/A | 0.524 | 0.264 | 0.48 | 2e-99 | |
| O15067 | 1338 | Phosphoribosylformylglyci | yes | N/A | 0.521 | 0.266 | 0.468 | 1e-96 | |
| P35421 | 1354 | Phosphoribosylformylglyci | yes | N/A | 0.617 | 0.312 | 0.398 | 2e-96 | |
| Q5SUR0 | 1337 | Phosphoribosylformylglyci | yes | N/A | 0.521 | 0.267 | 0.470 | 8e-96 | |
| Q9M8D3 | 1407 | Probable phosphoribosylfo | yes | N/A | 0.522 | 0.254 | 0.449 | 7e-95 | |
| Q19311 | 1324 | Probable phosphoribosylfo | yes | N/A | 0.483 | 0.25 | 0.429 | 3e-75 | |
| Q6D238 | 1294 | Phosphoribosylformylglyci | yes | N/A | 0.468 | 0.248 | 0.326 | 2e-46 | |
| Q12PR7 | 1293 | Phosphoribosylformylglyci | yes | N/A | 0.356 | 0.188 | 0.393 | 3e-45 | |
| Q8ZCQ2 | 1296 | Phosphoribosylformylglyci | yes | N/A | 0.506 | 0.267 | 0.319 | 8e-45 | |
| Q1C5E7 | 1296 | Phosphoribosylformylglyci | yes | N/A | 0.506 | 0.267 | 0.319 | 8e-45 |
| >sp|Q54JC8|PUR4_DICDI Phosphoribosylformylglycinamidine synthase OS=Dictyostelium discoideum GN=purL PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 363 bits (933), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 192/400 (48%), Positives = 256/400 (64%), Gaps = 41/400 (10%)
Query: 88 MAIIRYYSKPGIGAGEKTKKLKAVPKV-----ISDIESELCYNIEI--SRELTPVELDKL 140
M I ++Y KP I E K LK K I IE+E C+N++ + +L E L
Sbjct: 1 MTIQQFYRKPAISEYE-IKLLKNNLKKQHNIDIESIETEYCFNVQYPDNHKLNESEQSTL 59
Query: 141 HWILNSSFECRKLSSHTNF-------KDNSNVIEVGPRLNFSTPFCSNVLSICQSI---- 189
W+L+ +FE + S +F +N +IEVGPR+NF+T + SN SIC+S
Sbjct: 60 VWLLSETFEPKNFSIDKSFLKTTTTTTENEIIIEVGPRMNFTTTYSSNATSICKSCNLSI 119
Query: 190 ---------------------QLHSCAESFYDRMTECVYSSPLTSFNHGIKPDPWFYVDV 228
Q+ E +DRMTEC+Y +P+ SF+ GI P Y+ V
Sbjct: 120 IDRIERSRRYLVKSVSKLSEKQIDQFLELIHDRMTECLYPTPIKSFDTGIIPKAVVYIPV 179
Query: 229 MGKGKVALQEVNQKLGLAFDEWDLEYYTDIFRNKLKRNPTSVECFDLAQSNSEHSRHWFF 288
+ +G+ AL+ VN+++GLAFDE DL YTD+F+N+LKRNP+ VECFD+ QSNSEHSRHWFF
Sbjct: 180 VEEGRAALERVNKEMGLAFDEQDLALYTDLFQNQLKRNPSDVECFDIGQSNSEHSRHWFF 239
Query: 289 KGKMIVDGIESDKCLFEMIMDTTKHSNQNNVIKFNDNSSAIQGYRDLPAITPTNPGAPGP 348
GK+IVDG SDK LF+++ +T K + QN++I F+DNSS+I+G++ + P +
Sbjct: 240 NGKLIVDGNMSDKTLFQIVKNTLKANPQNSLIAFSDNSSSIKGFK-TKVLIPKSQIEASE 298
Query: 349 YTITNQDLDIIFTAETHNFPTGVSPFSGATTGTGGRIRDVQAVGRGGNCIAGTAGYCVGN 408
Y ++ IIFTAETHNFPTG++PF GA TGTGGR+RD A GRG +AGT GYCVGN
Sbjct: 299 YLEGEREQPIIFTAETHNFPTGIAPFEGAETGTGGRLRDTHATGRGSLVVAGTVGYCVGN 358
Query: 409 LNIPGYKLPWEDEQYGYPNNFATPLNILIEASNGASDYGN 448
LNIPGY+LPWE+++Y YP+N A PL I IEASNGASDYGN
Sbjct: 359 LNIPGYELPWENKEYNYPDNMANPLKIEIEASNGASDYGN 398
|
Dictyostelium discoideum (taxid: 44689) EC: 6EC: .EC: 3EC: .EC: 5EC: .EC: 3 |
| >sp|O15067|PUR4_HUMAN Phosphoribosylformylglycinamidine synthase OS=Homo sapiens GN=PFAS PE=1 SV=4 | Back alignment and function description |
|---|
| >sp|P35421|PUR4_DROME Phosphoribosylformylglycinamidine synthase OS=Drosophila melanogaster GN=ade2 PE=1 SV=2 | Back alignment and function description |
|---|
| >sp|Q5SUR0|PUR4_MOUSE Phosphoribosylformylglycinamidine synthase OS=Mus musculus GN=Pfas PE=2 SV=1 | Back alignment and function description |
|---|
| >sp|Q9M8D3|PUR4_ARATH Probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=At1g74260 PE=1 SV=3 | Back alignment and function description |
|---|
| >sp|Q19311|PUR4_CAEEL Probable phosphoribosylformylglycinamidine synthase OS=Caenorhabditis elegans GN=F10F2.2 PE=3 SV=3 | Back alignment and function description |
|---|
| >sp|Q6D238|PUR4_ERWCT Phosphoribosylformylglycinamidine synthase OS=Erwinia carotovora subsp. atroseptica (strain SCRI 1043 / ATCC BAA-672) GN=purL PE=3 SV=1 | Back alignment and function description |
|---|
| >sp|Q12PR7|PUR4_SHEDO Phosphoribosylformylglycinamidine synthase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=purL PE=3 SV=1 | Back alignment and function description |
|---|
| >sp|Q8ZCQ2|PUR4_YERPE Phosphoribosylformylglycinamidine synthase OS=Yersinia pestis GN=purL PE=3 SV=1 | Back alignment and function description |
|---|
| >sp|Q1C5E7|PUR4_YERPA Phosphoribosylformylglycinamidine synthase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=purL PE=3 SV=2 | Back alignment and function description |
|---|
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 685 | ||||||
| 345490285 | 1324 | PREDICTED: phosphoribosylformylglycinami | 0.614 | 0.317 | 0.467 | 1e-123 | |
| 350424352 | 1325 | PREDICTED: phosphoribosylformylglycinami | 0.525 | 0.271 | 0.545 | 1e-121 | |
| 340722703 | 1325 | PREDICTED: phosphoribosylformylglycinami | 0.525 | 0.271 | 0.545 | 1e-120 | |
| 383857210 | 1325 | PREDICTED: phosphoribosylformylglycinami | 0.525 | 0.271 | 0.545 | 1e-120 | |
| 328791126 | 1325 | PREDICTED: phosphoribosylformylglycinami | 0.525 | 0.271 | 0.538 | 1e-119 | |
| 380025190 | 1326 | PREDICTED: phosphoribosylformylglycinami | 0.525 | 0.271 | 0.530 | 1e-118 | |
| 322798297 | 1269 | hypothetical protein SINV_11838 [Solenop | 0.528 | 0.285 | 0.528 | 1e-116 | |
| 307180855 | 440 | Phosphoribosylformylglycinamidine syntha | 0.525 | 0.818 | 0.538 | 1e-116 | |
| 242003452 | 1316 | Phosphoribosylformylglycinamidine syntha | 0.525 | 0.273 | 0.541 | 1e-115 | |
| 260832808 | 1337 | hypothetical protein BRAFLDRAFT_278091 [ | 0.525 | 0.269 | 0.520 | 1e-113 |
| >gi|345490285|ref|XP_001605732.2| PREDICTED: phosphoribosylformylglycinamidine synthase-like [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 243/520 (46%), Positives = 311/520 (59%), Gaps = 99/520 (19%)
Query: 88 MAIIRYYSKPGIGAGEKTKKLKAVPKV---ISDIESELCYNIEISRELTPVELDKLHWIL 144
M I+++Y PG+ + + KL+ + K+ I+DIE+ELCY IE L +++ L WIL
Sbjct: 1 MVILKFYKNPGLKSSQLKSKLENLVKISTSINDIEAELCYYIESKNALDKKQIEILKWIL 60
Query: 145 NSSFECRKLSSHTNFKDNSNVIEVGPRLNFSTPFCSNVLSICQSIQL------------- 191
+S FE +L + FK V+E+GPRLNFST F SN +SIC+S+QL
Sbjct: 61 SSPFEPSQLVDCSLFKSEKLVVEIGPRLNFSTAFSSNAVSICKSVQLDNVTRVEVSTRYL 120
Query: 192 -HS-----------CAESFYDRMTECVYSSPLTSFNHGIKPDPWFYVDVMGKGKVALQEV 239
HS + +DRMTEC Y+ P+ +F+HG +P+ WF VDV+ G+ AL++V
Sbjct: 121 IHSTKPLDKKTENEVVNALHDRMTECRYTKPIETFDHGFRPEEWFEVDVLKHGRKALEDV 180
Query: 240 NQKLGLAFDEWDLEYYTDIFRNKLKRNPTSVECFDLAQSNSEHSRHWFFKGKMIVDGIES 299
N KLGLAFDEWDL++YT++F+N+LKRNPTSVECFDLAQSNSEHSRHWFFKG+M++DG E
Sbjct: 181 NSKLGLAFDEWDLDFYTNMFKNQLKRNPTSVECFDLAQSNSEHSRHWFFKGRMVIDGEEK 240
Query: 300 DKCLFEMIMDTTKHSNQNNVIKFNDNSSAIQGYRDLPAITPTNPGAPGPYTITNQDLDII 359
DK L +MI+DT K SN NNVIKF+DNSSAI+G+ + + PT A + + N +I
Sbjct: 241 DKSLIDMIIDTQKSSNPNNVIKFSDNSSAIKGF-EAKTLRPTRTDAASSFQVENSKQHLI 299
Query: 360 FTAETHNFPTGVSPFSGATTGTGGRIRDVQAVGRGGNCIAGTAGYCVGNLNIPGYKLPWE 419
FTAETHNFPTGV+PFSGATTGTGGR+RDVQ VGRGG IAGTAGY VGNL+IPGYKLPWE
Sbjct: 300 FTAETHNFPTGVAPFSGATTGTGGRLRDVQGVGRGGYYIAGTAGYSVGNLHIPGYKLPWE 359
Query: 420 DEQ----YGYPNNFATPLNILIEASNGASDYGNIEPCSNDRAIATSIGEQPIKGLVDPKR 475
+EQ YP+N A PL I++EASNGASDYGN GE + G
Sbjct: 360 EEQGEKNSVYPSNMAQPLEIIVEASNGASDYGN------------KFGEPVVSG------ 401
Query: 476 GARMAVAEALTNLVFAKISDLKDVKCSGNWMWAAKLPGEGAALFDACQAMSWVLPARMGN 535
FA+ + D Q W+ P
Sbjct: 402 --------------FARSFGMVDA---------------------VGQRREWIKP----- 421
Query: 536 TRREWIKPIMFSGGIGTMKHELKEKASPNVGSLVISTYAP 575
IMFSGGIG+M+ + EK G V+ P
Sbjct: 422 --------IMFSGGIGSMEANMTEKLPAEPGMQVVKIGGP 453
|
Source: Nasonia vitripennis Species: Nasonia vitripennis Genus: Nasonia Family: Pteromalidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|350424352|ref|XP_003493767.1| PREDICTED: phosphoribosylformylglycinamidine synthase-like [Bombus impatiens] | Back alignment and taxonomy information |
|---|
| >gi|340722703|ref|XP_003399743.1| PREDICTED: phosphoribosylformylglycinamidine synthase-like [Bombus terrestris] | Back alignment and taxonomy information |
|---|
| >gi|383857210|ref|XP_003704098.1| PREDICTED: phosphoribosylformylglycinamidine synthase-like [Megachile rotundata] | Back alignment and taxonomy information |
|---|
| >gi|328791126|ref|XP_625036.3| PREDICTED: phosphoribosylformylglycinamidine synthase [Apis mellifera] | Back alignment and taxonomy information |
|---|
| >gi|380025190|ref|XP_003696360.1| PREDICTED: phosphoribosylformylglycinamidine synthase-like [Apis florea] | Back alignment and taxonomy information |
|---|
| >gi|322798297|gb|EFZ20043.1| hypothetical protein SINV_11838 [Solenopsis invicta] | Back alignment and taxonomy information |
|---|
| >gi|307180855|gb|EFN68691.1| Phosphoribosylformylglycinamidine synthase [Camponotus floridanus] | Back alignment and taxonomy information |
|---|
| >gi|242003452|ref|XP_002422737.1| Phosphoribosylformylglycinamidine synthase, putative [Pediculus humanus corporis] gi|212505570|gb|EEB09999.1| Phosphoribosylformylglycinamidine synthase, putative [Pediculus humanus corporis] | Back alignment and taxonomy information |
|---|
| >gi|260832808|ref|XP_002611349.1| hypothetical protein BRAFLDRAFT_278091 [Branchiostoma floridae] gi|229296720|gb|EEN67359.1| hypothetical protein BRAFLDRAFT_278091 [Branchiostoma floridae] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 685 | ||||||
| ZFIN|ZDB-GENE-030131-4420 | 1314 | pfas "phosphoribosylformylglyc | 0.375 | 0.195 | 0.633 | 1.1e-159 | |
| UNIPROTKB|O15067 | 1338 | PFAS "Phosphoribosylformylglyc | 0.389 | 0.199 | 0.564 | 1.6e-145 | |
| FB|FBgn0000052 | 1354 | ade2 "adenosine 2" [Drosophila | 0.362 | 0.183 | 0.594 | 6.2e-145 | |
| UNIPROTKB|I3L712 | 1338 | PFAS "Uncharacterized protein" | 0.376 | 0.192 | 0.571 | 5.2e-144 | |
| MGI|MGI:2684864 | 1337 | Pfas "phosphoribosylformylglyc | 0.363 | 0.186 | 0.586 | 8.5e-144 | |
| UNIPROTKB|F1N4K1 | 1338 | PFAS "Uncharacterized protein" | 0.378 | 0.193 | 0.581 | 3.2e-143 | |
| UNIPROTKB|E2QYQ9 | 1341 | PFAS "Uncharacterized protein" | 0.378 | 0.193 | 0.566 | 3.9e-143 | |
| DICTYBASE|DDB_G0288145 | 1355 | purL "PFAS" [Dictyostelium dis | 0.427 | 0.216 | 0.528 | 1.6e-137 | |
| RGD|1304926 | 1271 | Pfas "phosphoribosylformylglyc | 0.364 | 0.196 | 0.581 | 9.7e-134 | |
| TAIR|locus:2019637 | 1407 | PUR4 "purine biosynthesis 4" [ | 0.376 | 0.183 | 0.555 | 2.2e-131 |
| ZFIN|ZDB-GENE-030131-4420 pfas "phosphoribosylformylglycinamidine synthase" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 907 (324.3 bits), Expect = 1.1e-159, Sum P(3) = 1.1e-159
Identities = 164/259 (63%), Positives = 204/259 (78%)
Query: 190 QLHSCAESFYDRMTECVYSSPLTSFNHGIKPDPWFYVDVMGKGKVALQEVNQKLGLAFDE 249
++ S YD MTEC+Y+ P+TSF I+P F VD++GKG+ AL++ N +LGLAFD
Sbjct: 134 EMESLISCLYDSMTECIYAQPITSFAVDIRPQDVFEVDILGKGRAALEKANDELGLAFDS 193
Query: 250 WDLEYYTDIFRNKLKRNPTSVECFDLAQSNSEHSRHWFFKGKMIVDGIESDKCLFEMIMD 309
WDL+YYT +F+ K+KRNPTSVECFDLAQSNSEHSRHWFF+G+M++DG E + LF +IM
Sbjct: 194 WDLDYYTALFQ-KVKRNPTSVECFDLAQSNSEHSRHWFFRGRMVIDGKEQKETLFSLIMG 252
Query: 310 TTKHSNQNNVIKFNDNSSAIQGYRDLPAITPTNPGAPGPYTITNQDLDIIFTAETHNFPT 369
T +HSNQNNVIKF DNSS I+G +L + PTNP PY + +IFTAETHNFPT
Sbjct: 253 TQQHSNQNNVIKFCDNSSGIKGM-ELRCMYPTNPAQASPYESRDTTRHVIFTAETHNFPT 311
Query: 370 GVSPFSGATTGTGGRIRDVQAVGRGGNCIAGTAGYCVGNLNIPGYKLPWEDEQYGYPNNF 429
GV+PFSGATTGTGGRIRDVQ+ G+GG+ IAGTAGYC GNL+IPG+ LPWE+E + YP++F
Sbjct: 312 GVAPFSGATTGTGGRIRDVQSAGKGGHVIAGTAGYCFGNLHIPGFVLPWEEEGWEYPSSF 371
Query: 430 ATPLNILIEASNGASDYGN 448
A PL + IEAS+GASDYGN
Sbjct: 372 APPLQVAIEASDGASDYGN 390
|
|
| UNIPROTKB|O15067 PFAS "Phosphoribosylformylglycinamidine synthase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| FB|FBgn0000052 ade2 "adenosine 2" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|I3L712 PFAS "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:2684864 Pfas "phosphoribosylformylglycinamidine synthase (FGAR amidotransferase)" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1N4K1 PFAS "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E2QYQ9 PFAS "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| DICTYBASE|DDB_G0288145 purL "PFAS" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
| RGD|1304926 Pfas "phosphoribosylformylglycinamidine synthase" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2019637 PUR4 "purine biosynthesis 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 6.3.5 | LOW CONFIDENCE prediction! |
| 3rd Layer | 6.3.5.3 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 685 | |||
| PLN03206 | 1307 | PLN03206, PLN03206, phosphoribosylformylglycinamid | 1e-145 | |
| TIGR01735 | 1310 | TIGR01735, FGAM_synt, phosphoribosylformylglycinam | 1e-115 | |
| PRK05297 | 1290 | PRK05297, PRK05297, phosphoribosylformylglycinamid | 1e-101 | |
| PRK05297 | 1290 | PRK05297, PRK05297, phosphoribosylformylglycinamid | 3e-70 | |
| PLN03206 | 1307 | PLN03206, PLN03206, phosphoribosylformylglycinamid | 8e-69 | |
| TIGR01735 | 1310 | TIGR01735, FGAM_synt, phosphoribosylformylglycinam | 2e-68 | |
| cd02204 | 264 | cd02204, PurL_repeat2, PurL subunit of the formylg | 7e-51 | |
| PLN03206 | 1307 | PLN03206, PLN03206, phosphoribosylformylglycinamid | 3e-36 | |
| PHA03366 | 1304 | PHA03366, PHA03366, FGAM-synthase; Provisional | 3e-32 | |
| TIGR01735 | 1310 | TIGR01735, FGAM_synt, phosphoribosylformylglycinam | 4e-29 | |
| COG0046 | 743 | COG0046, PurL, Phosphoribosylformylglycinamidine ( | 5e-29 | |
| cd02203 | 313 | cd02203, PurL_repeat1, PurL subunit of the formylg | 1e-28 | |
| PRK05297 | 1290 | PRK05297, PRK05297, phosphoribosylformylglycinamid | 2e-25 | |
| TIGR01739 | 1202 | TIGR01739, tegu_FGAM_synt, herpesvirus tegument pr | 2e-25 | |
| COG0046 | 743 | COG0046, PurL, Phosphoribosylformylglycinamidine ( | 1e-20 | |
| cd02193 | 272 | cd02193, PurL, Formylglycinamide ribonucleotide am | 7e-17 | |
| cd02203 | 313 | cd02203, PurL_repeat1, PurL subunit of the formylg | 2e-15 | |
| PRK01213 | 724 | PRK01213, PRK01213, phosphoribosylformylglycinamid | 7e-11 | |
| pfam02769 | 150 | pfam02769, AIRS_C, AIR synthase related protein, C | 2e-09 | |
| TIGR01736 | 715 | TIGR01736, FGAM_synth_II, phosphoribosylformylglyc | 4e-09 | |
| PLN03206 | 1307 | PLN03206, PLN03206, phosphoribosylformylglycinamid | 1e-08 | |
| cd02193 | 272 | cd02193, PurL, Formylglycinamide ribonucleotide am | 3e-08 | |
| TIGR01735 | 1310 | TIGR01735, FGAM_synt, phosphoribosylformylglycinam | 1e-06 | |
| pfam00586 | 96 | pfam00586, AIRS, AIR synthase related protein, N-t | 3e-06 | |
| PRK14090 | 601 | PRK14090, PRK14090, phosphoribosylformylglycinamid | 4e-06 | |
| TIGR01857 | 1239 | TIGR01857, FGAM-synthase, phosphoribosylformylglyc | 7e-06 | |
| TIGR01736 | 715 | TIGR01736, FGAM_synth_II, phosphoribosylformylglyc | 1e-05 | |
| PRK05297 | 1290 | PRK05297, PRK05297, phosphoribosylformylglycinamid | 8e-05 | |
| PRK01213 | 724 | PRK01213, PRK01213, phosphoribosylformylglycinamid | 5e-04 | |
| cd02193 | 272 | cd02193, PurL, Formylglycinamide ribonucleotide am | 7e-04 | |
| COG0046 | 743 | COG0046, PurL, Phosphoribosylformylglycinamidine ( | 0.003 |
| >gnl|CDD|178745 PLN03206, PLN03206, phosphoribosylformylglycinamidine synthase; Provisional | Back alignment and domain information |
|---|
Score = 454 bits (1170), Expect = e-145
Identities = 183/378 (48%), Positives = 249/378 (65%), Gaps = 33/378 (8%)
Query: 103 EKTKKLKA-VPKVISDIESELCYNIEISRELTPVELDKLHWILNSSFECRKLSSHTNFKD 161
E +K++ V I IE+E C+N+ + L+ +L+ L W+L +FE L + + +
Sbjct: 2 ELLRKVQTKVSNDIVSIETEQCFNVGLESPLSAEKLETLKWLLRETFEPENLGTESFLEA 61
Query: 162 ------NSNVIEVGPRLNFSTPFCSNVLSICQSI-------------------------Q 190
N+ V+EVGPRL+F+T + +N +SIC + Q
Sbjct: 62 KKSEGLNAVVVEVGPRLSFTTAWSTNAVSICSACGLTEVTRLERSRRYLLFSSSPLDESQ 121
Query: 191 LHSCAESFYDRMTECVYSSPLTSFNHGIKPDPWFYVDVMGKGKVALQEVNQKLGLAFDEW 250
+++ A +DRMTECVY PLTSF G+ P+P + V VM +G+ AL+E+N+++GLAFDE
Sbjct: 122 INAFAAMVHDRMTECVYPQPLTSFESGVVPEPVYTVPVMEEGRAALEEINKEMGLAFDEQ 181
Query: 251 DLEYYTDIFRNKLKRNPTSVECFDLAQSNSEHSRHWFFKGKMIVDGIESDKCLFEMIMDT 310
DL+YYT +FR+ +KR+PT+VE FD+AQSNSEHSRHWFF GK+++DG K LF+M+ DT
Sbjct: 182 DLDYYTRLFRDDIKRDPTNVELFDIAQSNSEHSRHWFFSGKLVIDGQPMPKTLFQMVKDT 241
Query: 311 TKHSNQNNVIKFNDNSSAIQGYRDLPAITPTNPGAPGPYTITNQDLDIIFTAETHNFPTG 370
K + N+VI F DNSSAI+G+ P + P +PG+P P ++DLDI+ TAETHNFP
Sbjct: 242 LKANPNNSVIGFKDNSSAIRGFVVQP-LRPVSPGSPSPLAPVDRDLDILLTAETHNFPCA 300
Query: 371 VSPFSGATTGTGGRIRDVQAVGRGGNCIAGTAGYCVGNLNIPGYKLPWEDEQYGYPNNFA 430
V+P+ GA TG GGRIRD A GRG +AGTAGYCVGNL I G PWED + YP+N A
Sbjct: 301 VAPYPGAETGAGGRIRDTHATGRGSFVVAGTAGYCVGNLRIEGSYAPWEDSSFVYPSNLA 360
Query: 431 TPLNILIEASNGASDYGN 448
+PL ILI+ASNGASDYGN
Sbjct: 361 SPLQILIDASNGASDYGN 378
|
Length = 1307 |
| >gnl|CDD|188163 TIGR01735, FGAM_synt, phosphoribosylformylglycinamidine synthase, single chain form | Back alignment and domain information |
|---|
| >gnl|CDD|235394 PRK05297, PRK05297, phosphoribosylformylglycinamidine synthase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|235394 PRK05297, PRK05297, phosphoribosylformylglycinamidine synthase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|178745 PLN03206, PLN03206, phosphoribosylformylglycinamidine synthase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|188163 TIGR01735, FGAM_synt, phosphoribosylformylglycinamidine synthase, single chain form | Back alignment and domain information |
|---|
| >gnl|CDD|100035 cd02204, PurL_repeat2, PurL subunit of the formylglycinamide ribonucleotide amidotransferase (FGAR-AT), second repeat | Back alignment and domain information |
|---|
| >gnl|CDD|178745 PLN03206, PLN03206, phosphoribosylformylglycinamidine synthase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223058 PHA03366, PHA03366, FGAM-synthase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|188163 TIGR01735, FGAM_synt, phosphoribosylformylglycinamidine synthase, single chain form | Back alignment and domain information |
|---|
| >gnl|CDD|223124 COG0046, PurL, Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|100034 cd02203, PurL_repeat1, PurL subunit of the formylglycinamide ribonucleotide amidotransferase (FGAR-AT), first repeat | Back alignment and domain information |
|---|
| >gnl|CDD|235394 PRK05297, PRK05297, phosphoribosylformylglycinamidine synthase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|233554 TIGR01739, tegu_FGAM_synt, herpesvirus tegument protein/v-FGAM-synthase | Back alignment and domain information |
|---|
| >gnl|CDD|223124 COG0046, PurL, Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|100029 cd02193, PurL, Formylglycinamide ribonucleotide amidotransferase (FGAR-AT) catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to formylglycinamidine ribonucleotide (FGAM), ADP, phosphate, and glutamate in the fourth step of the purine biosynthetic pathway | Back alignment and domain information |
|---|
| >gnl|CDD|100034 cd02203, PurL_repeat1, PurL subunit of the formylglycinamide ribonucleotide amidotransferase (FGAR-AT), first repeat | Back alignment and domain information |
|---|
| >gnl|CDD|234921 PRK01213, PRK01213, phosphoribosylformylglycinamidine synthase II; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|217219 pfam02769, AIRS_C, AIR synthase related protein, C-terminal domain | Back alignment and domain information |
|---|
| >gnl|CDD|233552 TIGR01736, FGAM_synth_II, phosphoribosylformylglycinamidine synthase II | Back alignment and domain information |
|---|
| >gnl|CDD|178745 PLN03206, PLN03206, phosphoribosylformylglycinamidine synthase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|100029 cd02193, PurL, Formylglycinamide ribonucleotide amidotransferase (FGAR-AT) catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to formylglycinamidine ribonucleotide (FGAM), ADP, phosphate, and glutamate in the fourth step of the purine biosynthetic pathway | Back alignment and domain information |
|---|
| >gnl|CDD|188163 TIGR01735, FGAM_synt, phosphoribosylformylglycinamidine synthase, single chain form | Back alignment and domain information |
|---|
| >gnl|CDD|216008 pfam00586, AIRS, AIR synthase related protein, N-terminal domain | Back alignment and domain information |
|---|
| >gnl|CDD|184499 PRK14090, PRK14090, phosphoribosylformylglycinamidine synthase II; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|130916 TIGR01857, FGAM-synthase, phosphoribosylformylglycinamidine synthase, clade II | Back alignment and domain information |
|---|
| >gnl|CDD|233552 TIGR01736, FGAM_synth_II, phosphoribosylformylglycinamidine synthase II | Back alignment and domain information |
|---|
| >gnl|CDD|235394 PRK05297, PRK05297, phosphoribosylformylglycinamidine synthase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|234921 PRK01213, PRK01213, phosphoribosylformylglycinamidine synthase II; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|100029 cd02193, PurL, Formylglycinamide ribonucleotide amidotransferase (FGAR-AT) catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to formylglycinamidine ribonucleotide (FGAM), ADP, phosphate, and glutamate in the fourth step of the purine biosynthetic pathway | Back alignment and domain information |
|---|
| >gnl|CDD|223124 COG0046, PurL, Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 685 | |||
| PLN03206 | 1307 | phosphoribosylformylglycinamidine synthase; Provis | 100.0 | |
| KOG1907|consensus | 1320 | 100.0 | ||
| PRK05297 | 1290 | phosphoribosylformylglycinamidine synthase; Provis | 100.0 | |
| TIGR01735 | 1310 | FGAM_synt phosphoribosylformylglycinamidine syntha | 100.0 | |
| TIGR01857 | 1239 | FGAM-synthase phosphoribosylformylglycinamidine sy | 100.0 | |
| COG0046 | 743 | PurL Phosphoribosylformylglycinamidine (FGAM) synt | 100.0 | |
| PRK01213 | 724 | phosphoribosylformylglycinamidine synthase II; Pro | 100.0 | |
| TIGR01736 | 715 | FGAM_synth_II phosphoribosylformylglycinamidine sy | 100.0 | |
| PRK14090 | 601 | phosphoribosylformylglycinamidine synthase II; Pro | 100.0 | |
| PHA03366 | 1304 | FGAM-synthase; Provisional | 100.0 | |
| TIGR01739 | 1202 | tegu_FGAM_synt herpesvirus tegument protein/v-FGAM | 100.0 | |
| cd02203 | 313 | PurL_repeat1 PurL subunit of the formylglycinamide | 100.0 | |
| cd02193 | 272 | PurL Formylglycinamide ribonucleotide amidotransfe | 100.0 | |
| cd02204 | 264 | PurL_repeat2 PurL subunit of the formylglycinamide | 99.97 | |
| KOG1907|consensus | 1320 | 99.97 | ||
| TIGR01735 | 1310 | FGAM_synt phosphoribosylformylglycinamidine syntha | 99.91 | |
| PRK14090 | 601 | phosphoribosylformylglycinamidine synthase II; Pro | 99.89 | |
| cd00396 | 222 | PurM-like AIR (aminoimidazole ribonucleotide) synt | 99.87 | |
| cd02192 | 283 | PurM-like3 AIR synthase (PurM) related protein, su | 99.82 | |
| cd02195 | 287 | SelD Selenophosphate synthetase (SelD) catalyzes t | 99.81 | |
| TIGR03267 | 323 | methan_mark_2 putative methanogenesis marker prote | 99.8 | |
| PRK05297 | 1290 | phosphoribosylformylglycinamidine synthase; Provis | 99.79 | |
| cd02196 | 297 | PurM PurM (Aminoimidazole Ribonucleotide [AIR] syn | 99.77 | |
| PLN03206 | 1307 | phosphoribosylformylglycinamidine synthase; Provis | 99.77 | |
| cd02197 | 293 | HypE HypE (Hydrogenase expression/formation protei | 99.77 | |
| cd02194 | 291 | ThiL ThiL (Thiamine-monophosphate kinase) plays a | 99.75 | |
| TIGR01379 | 317 | thiL thiamine-monophosphate kinase. Proteins scori | 99.75 | |
| TIGR01736 | 715 | FGAM_synth_II phosphoribosylformylglycinamidine sy | 99.75 | |
| TIGR02124 | 320 | hypE hydrogenase expression/formation protein HypE | 99.74 | |
| TIGR00878 | 332 | purM phosphoribosylaminoimidazole synthetase. This | 99.73 | |
| PRK05731 | 318 | thiamine monophosphate kinase; Provisional | 99.72 | |
| PRK01213 | 724 | phosphoribosylformylglycinamidine synthase II; Pro | 99.72 | |
| cd06061 | 298 | PurM-like1 AIR synthase (PurM) related protein, su | 99.71 | |
| PRK05385 | 327 | phosphoribosylaminoimidazole synthetase; Provision | 99.67 | |
| cd02691 | 346 | PurM-like2 AIR synthase (PurM) related protein, ar | 99.57 | |
| COG2144 | 324 | Selenophosphate synthetase-related proteins [Gener | 99.56 | |
| PRK00943 | 347 | selenophosphate synthetase; Provisional | 99.55 | |
| TIGR00476 | 347 | selD selenium donor protein. In prokaryotes, the i | 99.55 | |
| COG0046 | 743 | PurL Phosphoribosylformylglycinamidine (FGAM) synt | 99.54 | |
| PRK14105 | 345 | selenophosphate synthetase; Provisional | 99.45 | |
| COG0309 | 339 | HypE Hydrogenase maturation factor [Posttranslatio | 99.39 | |
| TIGR01857 | 1239 | FGAM-synthase phosphoribosylformylglycinamidine sy | 99.32 | |
| PLN02557 | 379 | phosphoribosylformylglycinamidine cyclo-ligase | 99.21 | |
| COG0611 | 317 | ThiL Thiamine monophosphate kinase [Coenzyme metab | 98.95 | |
| PF02769 | 153 | AIRS_C: AIR synthase related protein, C-terminal d | 98.92 | |
| PF00586 | 96 | AIRS: AIR synthase related protein, N-terminal dom | 98.78 | |
| cd02193 | 272 | PurL Formylglycinamide ribonucleotide amidotransfe | 98.57 | |
| COG0150 | 345 | PurM Phosphoribosylaminoimidazole (AIR) synthetase | 97.63 | |
| COG1973 | 449 | HypE Hydrogenase maturation factor [Posttranslatio | 97.5 | |
| PF00586 | 96 | AIRS: AIR synthase related protein, N-terminal dom | 97.21 | |
| COG0709 | 346 | SelD Selenophosphate synthase [Amino acid transpor | 97.18 | |
| cd02203 | 313 | PurL_repeat1 PurL subunit of the formylglycinamide | 96.48 | |
| cd00396 | 222 | PurM-like AIR (aminoimidazole ribonucleotide) synt | 95.94 | |
| TIGR01379 | 317 | thiL thiamine-monophosphate kinase. Proteins scori | 95.7 | |
| PRK05731 | 318 | thiamine monophosphate kinase; Provisional | 95.19 | |
| PRK06423 | 73 | phosphoribosylformylglycinamidine synthase; Provis | 94.89 | |
| TIGR03267 | 323 | methan_mark_2 putative methanogenesis marker prote | 94.79 | |
| TIGR01739 | 1202 | tegu_FGAM_synt herpesvirus tegument protein/v-FGAM | 93.91 | |
| PRK05974 | 80 | phosphoribosylformylglycinamidine synthase subunit | 93.73 | |
| KOG3939|consensus | 312 | 93.72 | ||
| KOG0237|consensus | 788 | 93.7 | ||
| TIGR00302 | 80 | phosphoribosylformylglycinamidine synthase, purS p | 93.44 | |
| cd02195 | 287 | SelD Selenophosphate synthetase (SelD) catalyzes t | 92.97 | |
| cd02194 | 291 | ThiL ThiL (Thiamine-monophosphate kinase) plays a | 92.35 | |
| PF02700 | 80 | PurS: Phosphoribosylformylglycinamidine (FGAM) syn | 92.14 | |
| cd02192 | 283 | PurM-like3 AIR synthase (PurM) related protein, su | 88.35 | |
| PRK00943 | 347 | selenophosphate synthetase; Provisional | 85.55 | |
| PRK06423 | 73 | phosphoribosylformylglycinamidine synthase; Provis | 83.85 | |
| PRK05974 | 80 | phosphoribosylformylglycinamidine synthase subunit | 83.82 | |
| cd02204 | 264 | PurL_repeat2 PurL subunit of the formylglycinamide | 82.07 |
| >PLN03206 phosphoribosylformylglycinamidine synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-140 Score=1265.47 Aligned_cols=562 Identities=51% Similarity=0.873 Sum_probs=518.7
Q ss_pred HHHHhc-CCCCcceEEEEEEEEEecCCCCCHHHHHHHHhhccccccccccCCCCcc---C--C-CCcEEEEecCCCcCCh
Q psy5568 105 TKKLKA-VPKVISDIESELCYNIEISRELTPVELDKLHWILNSSFECRKLSSHTNF---K--D-NSNVIEVGPRLNFSTP 177 (685)
Q Consensus 105 l~~l~~-~~~~V~~Vrte~vY~Vel~~~Ls~ee~~~L~~LLs~~~~~~~~~~~s~l---~--~-~~~~ieV~PR~G~~sp 177 (685)
+++|++ ..+.|.+|+++|||+|++...|++++.++|.|||.+++........+++ . . +..+++|+||+||+||
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~pr~~~~sp 83 (1307)
T PLN03206 4 LRKVQTKVSNDIVSIETEQCFNVGLESPLSAEKLETLKWLLRETFEPENLGTESFLEAKKSEGLNAVVVEVGPRLSFTTA 83 (1307)
T ss_pred HHHHhhhcCCCceEEEEEEEEEEEcCCCCCHHHHHHHHHHhccccCcccccccccccccccCCCceeEEEEeCCCCCCCc
Confidence 567774 6778999999999999998899999999999999955322111111112 1 1 2268999999999999
Q ss_pred hhhhHHHHHHHcCcch-------------------------hhhhhcccccceeecCcccccCCCCCCCCceEeeccCCC
Q psy5568 178 FCSNVLSICQSIQLHS-------------------------CAESFYDRMTECVYSSPLTSFNHGIKPDPWFYVDVMGKG 232 (685)
Q Consensus 178 wss~a~~i~~~~gl~~-------------------------~~~~L~d~mte~~~~~~~~~f~~~~~p~~~~~v~l~~~~ 232 (685)
||||||+|||+|||.. +.++|||||||++|..+...|....+|+|+.+||+++.+
T Consensus 84 wss~a~~i~~~~gl~~i~rier~~~~~~~~~~~~~~~~~~~~~~~~~drmte~~~~~~~~~~~~~~~p~~~~~v~~~~~~ 163 (1307)
T PLN03206 84 WSTNAVSICSACGLTEVTRLERSRRYLLFSSSPLDESQINAFAAMVHDRMTECVYPQPLTSFESGVVPEPVYTVPVMEEG 163 (1307)
T ss_pred chhHHHHHHHHcCCcceEEEEeeEEEEEecCCCCCHHHHHHHHHhcCCCCcceecCCchHhhcCCCCCCCceEECCCCCC
Confidence 9999999999999974 456899999999999866555555489999999999999
Q ss_pred HHHHHHHHHhcCCCCChhhHHHHHHHHHhhcCCCCcHHHHHhhhhhhcccccccccceeEEECCccChHhHHHHhhhhcc
Q psy5568 233 KVALQEVNQKLGLAFDEWDLEYYTDIFRNKLKRNPTSVECFDLAQSNSEHSRHWFFKGKMIVDGIESDKCLFEMIMDTTK 312 (685)
Q Consensus 233 ~~~L~~~~~~~gLal~~~e~~~i~~~f~~~l~R~PtdvEl~~~aq~wSEHCrhk~F~~~~~idg~~~~~sL~~~i~~t~~ 312 (685)
+++|+++|+++|||||++||+||++||++.|+|||||+|||||||+||||||||||||+|+|||+++++|||+|||.|++
T Consensus 164 ~~~L~~~~~~~gLAl~~~ei~~~~~~F~~~~~R~PTd~El~~~aq~~SEHCRHk~F~~~~~id~~~~~~sL~~mi~~t~~ 243 (1307)
T PLN03206 164 RAALEEINKEMGLAFDEQDLDYYTRLFRDDIKRDPTNVELFDIAQSNSEHSRHWFFSGKLVIDGQPMPKTLFQMVKDTLK 243 (1307)
T ss_pred HHHHHHHHHhcCCcCCHHHHHHHHHHHhhhcCCCCcHHHHHHHHhhhhhccCcceeeeEEEEcCCcCCccHHHHHHHHHH
Confidence 99999999999999999999999999986699999999999999999999999999999999999999999999999999
Q ss_pred ccCCCceeecccccceeeccccCCccccCCCCCCCCceecccceeEEEeeCCCCCCccccCCCCccccccceeeeecccC
Q psy5568 313 HSNQNNVIKFNDNSSAIQGYRDLPAITPTNPGAPGPYTITNQDLDIIFTAETHNFPTGVSPFSGATTGTGGRIRDVQAVG 392 (685)
Q Consensus 313 ~~~~~~v~~~~dna~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~k~ETHNhPsai~Pf~GAaTG~GG~iRD~~~~G 392 (685)
..+++++|+|+|||++|+|+. ..+|+|++++.++.|+.++++|+++|||||||||||||||+|||||+||+|||+++||
T Consensus 244 ~~~~~~~~~~~Dns~~i~g~~-~~~~~~~~~~~~~~~~~~~e~~~i~fK~ETHNHPTaIePf~GAATGvGG~IRD~~a~G 322 (1307)
T PLN03206 244 ANPNNSVIGFKDNSSAIRGFV-VQPLRPVSPGSPSPLAPVDRDLDILLTAETHNFPCAVAPYPGAETGAGGRIRDTHATG 322 (1307)
T ss_pred HCCCCceEEeeehhhhhccce-eeEEeccCCCCCcceeEecCceEEEEEeccCCCCCccCCCCcccccCCceeecccccC
Confidence 889999999999999999987 8999999877888999999999999999999999999999999999999999999999
Q ss_pred CCCeeeecccceEeccCCCCCCCCCCCcccCCCCCCCcchHHHHHHhcccccCCCCC--CC-----------CC------
Q psy5568 393 RGGNCIAGTAGYCVGNLNIPGYKLPWEDEQYGYPNNFATPLNILIEASNGASDYGNI--EP-----------CS------ 453 (685)
Q Consensus 393 rGa~pia~~~~~~~g~l~ip~~~~pwe~~~~~~p~~~~~~~~i~~~~~~G~s~YgN~--~P-----------c~------ 453 (685)
|||||||+|++||||+|++|++.+|||+.++++|+++++|++||+++++|+|+|||+ +| |.
T Consensus 323 rGa~PiA~l~~~~~g~l~~~g~~~p~e~~~~~~p~~l~~~~~I~~~~~~G~s~YGN~~G~P~v~G~~~~F~~~~~~g~~~ 402 (1307)
T PLN03206 323 RGSFVVAGTAGYCVGNLRIEGSYAPWEDSSFVYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYTRTFGMRLPNGERR 402 (1307)
T ss_pred CCceeeecceeEEecCCCCCCCcCccccccccCcccCCCHhHHhhccCCccccCCcccCCcccCcEEEEecccccccccc
Confidence 999999999999999999999999999889999999999999999999999999999 77 00
Q ss_pred --------------------------------------------------------------------------------
Q psy5568 454 -------------------------------------------------------------------------------- 453 (685)
Q Consensus 454 -------------------------------------------------------------------------------- 453 (685)
T Consensus 403 ~~~kPim~ag~vG~~~~~~v~k~~~~~G~~vv~lGG~tgRdGigGat~SS~~~~~~s~~~d~~aVQ~GnP~~Ekklq~vi 482 (1307)
T PLN03206 403 EWLKPIMFSGGIGQIDHTHLTKGEPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDAELDFNAVQRGDAEMSQKLYRVV 482 (1307)
T ss_pred ccCCCceEEEEEEEEcHHHcccCCCCCCCEEEEECCCcccccccchhhhhhhhCCccccccCCccccCCHHHHHHHHHHH
Confidence
Q ss_pred ----C---------------------------------------------------------------------------
Q psy5568 454 ----N--------------------------------------------------------------------------- 454 (685)
Q Consensus 454 ----~--------------------------------------------------------------------------- 454 (685)
+
T Consensus 483 ~ac~e~~~~~~I~~i~D~GAGGls~a~~Ela~~~G~~i~Ld~Vp~~e~gmsp~EI~~SESQERm~l~V~p~~~~~f~~i~ 562 (1307)
T PLN03206 483 RACVEMGEDNPIVSIHDQGAGGNCNVVKEIIYPKGAEIDIRAVVVGDHTLSVLEIWGAEYQEQDALLIKPESRDLLQSIC 562 (1307)
T ss_pred HHHHHhhcCCCEEEEEecCCchHHHhHHHHhhcCceEEEhhhCcCCCCCCCHHHHHHhHHhhhheeeECcccHHHHHHHH
Confidence 0
Q ss_pred --------------------------------------------------------------------------------
Q psy5568 455 -------------------------------------------------------------------------------- 454 (685)
Q Consensus 455 -------------------------------------------------------------------------------- 454 (685)
T Consensus 563 ~re~~~~~vVG~vT~~~rl~v~~~~~~~~~~~~g~~~~~~~~dlp~~~l~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (1307)
T PLN03206 563 DRERCSMAVIGTIDGSGRVVLVDSAAPEKCEANGLPPPPPAVDLDLEKVLGDMPQKTFEFKRVANKLEPLDIPPGITVMD 642 (1307)
T ss_pred HHcCCCeEEEEEEecCCeEEEEECCccccccccccccCceeEEEEhHHhcCCCCccccccccccccccccccCCCcCHHH
Confidence
Q ss_pred -------------------------------------------C-----------ceeEEecccCCceeecCHHHHHHHH
Q psy5568 455 -------------------------------------------D-----------RAIATSIGEQPIKGLVDPKRGARMA 480 (685)
Q Consensus 455 -------------------------------------------D-----------~G~A~s~G~~p~~~~~DP~~ga~~A 480 (685)
| +|+|||+|+||+++++|||+||++|
T Consensus 643 ~l~~vL~~pnVaSK~~l~~~~D~~V~g~vv~~~~vGp~q~p~aD~aV~~~~~~~~~g~a~s~G~~p~~~~~dp~~ga~~A 722 (1307)
T PLN03206 643 ALKRVLRLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQIPLADVAVIAQTHTGLTGGACAIGEQPIKGLVDPKAMARLA 722 (1307)
T ss_pred HHHHHhcCCccccccchhhhcccccCceEcccCccCCccCCCcceeEEEEeCCCCeEEEEEecCCCceeeeCHHHHHHHH
Confidence 1 6999999999999999999999999
Q ss_pred HHHHHhhhhccCCccccccccccccccCCCCCchHHHHHHHHHHHHHHhhhhhcCCCccccCCeeeeeeeceeecccc--
Q psy5568 481 VAEALTNLVFAKISDLKDVKCSGNWMWAAKLPGEGAALFDACQAMSWVLPARMGNTRREWIKPIMFSGGIGTMKHELK-- 558 (685)
Q Consensus 481 V~EAl~Nl~a~Ga~pl~~v~~s~N~~~p~~~p~~~~~L~~av~g~~d~c~~L~~~~~~~~~~gipivgGkdSm~~~~~-- 558 (685)
|+||+|||+++++..+.++.+|+||||++++|++.++|++||+||+|+|++| ||||+||||||||++.
T Consensus 723 V~Ea~~Nlvaa~~~~l~di~~s~nw~~~~~~p~~~~~l~~av~g~~~~~~~L----------gipii~GKdSls~~~~~~ 792 (1307)
T PLN03206 723 VGEALTNLVWAKVTALSDVKASGNWMYAAKLDGEGADMYDAAVALRDAMIEL----------GVAIDGGKDSLSMAAQAG 792 (1307)
T ss_pred HHHHHhHhhccCCCcHHHeEEEcChhHhhcCCCCHHHHHHHHHHHHHHHHHc----------CCCcccCeecCCCCCCCC
Confidence 9999999999988779999999999999999999999999999999999999 9999999999999863
Q ss_pred CCcccCCcceEEEEEeeeCCCCcccCCCCcCCCCCCcceEEEEEcCCCcCccchhHHHHHhhhhcCCCCCcCCHHHHHHH
Q psy5568 559 EKASPNVGSLVISTYAPCPDIRQVVTPDIKSPRLGYSSSLLWIDLSCGQHRVGGSALSQVLAEVRGPSPDVEDAAALVRA 638 (685)
Q Consensus 559 ~~~v~ippTlvisa~g~v~d~~~~vtp~~k~~G~d~~s~lv~i~lg~~~~~lGGS~la~~~~~~g~~~P~v~d~~~~k~~ 638 (685)
++.+++||||+||++|+|+|+++++||+||.+| | +.++|||||.++.+||||+|+|+++++++.+|+++|++.+|++
T Consensus 793 ~~~~~~P~TLvIs~~~~v~Dv~~~vtp~lK~~G-~--~vlL~idlG~~~~~LGGS~~~q~~~~~g~~~Pdv~d~~~lK~~ 869 (1307)
T PLN03206 793 GEVVKAPGNLVISAYVTCPDITKTVTPDLKLGD-D--GVLLHVDLGKGKRRLGGSALAQAYDQIGDDCPDLDDVAYLKKA 869 (1307)
T ss_pred CCCcCCCCCEEEEEEEEcCCcccCcChhhcCCC-C--EEEEEEecCCCCcCccccHHHHHhCccCCCCCCCCCHHHHHHH
Confidence 356899999999999999999999999999988 4 5667799999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCcEEEEcCCcchHHHHHHHHHhcCCCCeEEE
Q psy5568 639 FNVTQRLIQDGQVLSGHDISDGGLLICLLEMDVGANSPKGWV 680 (685)
Q Consensus 639 ~~~v~~li~~glv~A~HDvSdGGL~~aLaEMa~ag~~G~~I~ 680 (685)
|+++++|+++|+|+|+||+|+|||++||+||||++++|++|+
T Consensus 870 f~av~~Li~~glV~A~HDvSdGGL~~ALaEMAfag~~G~~Id 911 (1307)
T PLN03206 870 FEATQDLIAKRLISAGHDISDGGLVVTLLEMAFAGNCGINVD 911 (1307)
T ss_pred HHHHHHHHHCCCeeEEEeCCcCHHHHHHHHHHhhcCCcEEEE
Confidence 999999999999999999999999999999999999999997
|
|
| >KOG1907|consensus | Back alignment and domain information |
|---|
| >PRK05297 phosphoribosylformylglycinamidine synthase; Provisional | Back alignment and domain information |
|---|
| >TIGR01735 FGAM_synt phosphoribosylformylglycinamidine synthase, single chain form | Back alignment and domain information |
|---|
| >TIGR01857 FGAM-synthase phosphoribosylformylglycinamidine synthase, clade II | Back alignment and domain information |
|---|
| >COG0046 PurL Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >PRK01213 phosphoribosylformylglycinamidine synthase II; Provisional | Back alignment and domain information |
|---|
| >TIGR01736 FGAM_synth_II phosphoribosylformylglycinamidine synthase II | Back alignment and domain information |
|---|
| >PRK14090 phosphoribosylformylglycinamidine synthase II; Provisional | Back alignment and domain information |
|---|
| >PHA03366 FGAM-synthase; Provisional | Back alignment and domain information |
|---|
| >TIGR01739 tegu_FGAM_synt herpesvirus tegument protein/v-FGAM-synthase | Back alignment and domain information |
|---|
| >cd02203 PurL_repeat1 PurL subunit of the formylglycinamide ribonucleotide amidotransferase (FGAR-AT), first repeat | Back alignment and domain information |
|---|
| >cd02193 PurL Formylglycinamide ribonucleotide amidotransferase (FGAR-AT) catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to formylglycinamidine ribonucleotide (FGAM), ADP, phosphate, and glutamate in the fourth step of the purine biosynthetic pathway | Back alignment and domain information |
|---|
| >cd02204 PurL_repeat2 PurL subunit of the formylglycinamide ribonucleotide amidotransferase (FGAR-AT), second repeat | Back alignment and domain information |
|---|
| >KOG1907|consensus | Back alignment and domain information |
|---|
| >TIGR01735 FGAM_synt phosphoribosylformylglycinamidine synthase, single chain form | Back alignment and domain information |
|---|
| >PRK14090 phosphoribosylformylglycinamidine synthase II; Provisional | Back alignment and domain information |
|---|
| >cd00396 PurM-like AIR (aminoimidazole ribonucleotide) synthase related protein | Back alignment and domain information |
|---|
| >cd02192 PurM-like3 AIR synthase (PurM) related protein, subgroup 3 of unknown function | Back alignment and domain information |
|---|
| >cd02195 SelD Selenophosphate synthetase (SelD) catalyzes the conversion of selenium to selenophosphate which is required by a number of bacterial, archaeal and eukaryotic organisms for synthesis of Secys-tRNA, the precursor of selenocysteine in selenoenzymes | Back alignment and domain information |
|---|
| >TIGR03267 methan_mark_2 putative methanogenesis marker protein 2 | Back alignment and domain information |
|---|
| >PRK05297 phosphoribosylformylglycinamidine synthase; Provisional | Back alignment and domain information |
|---|
| >cd02196 PurM PurM (Aminoimidazole Ribonucleotide [AIR] synthetase), one of eleven enzymes required for purine biosynthesis, catalyzes the conversion of formylglycinamide ribonucleotide (FGAM) and ATP to AIR, ADP, and Pi, the fifth step in de novo purine biosynthesis | Back alignment and domain information |
|---|
| >PLN03206 phosphoribosylformylglycinamidine synthase; Provisional | Back alignment and domain information |
|---|
| >cd02197 HypE HypE (Hydrogenase expression/formation protein) | Back alignment and domain information |
|---|
| >cd02194 ThiL ThiL (Thiamine-monophosphate kinase) plays a dual role in de novo biosynthesis and in salvage of exogenous thiamine | Back alignment and domain information |
|---|
| >TIGR01379 thiL thiamine-monophosphate kinase | Back alignment and domain information |
|---|
| >TIGR01736 FGAM_synth_II phosphoribosylformylglycinamidine synthase II | Back alignment and domain information |
|---|
| >TIGR02124 hypE hydrogenase expression/formation protein HypE | Back alignment and domain information |
|---|
| >TIGR00878 purM phosphoribosylaminoimidazole synthetase | Back alignment and domain information |
|---|
| >PRK05731 thiamine monophosphate kinase; Provisional | Back alignment and domain information |
|---|
| >PRK01213 phosphoribosylformylglycinamidine synthase II; Provisional | Back alignment and domain information |
|---|
| >cd06061 PurM-like1 AIR synthase (PurM) related protein, subgroup 1 of unknown function | Back alignment and domain information |
|---|
| >PRK05385 phosphoribosylaminoimidazole synthetase; Provisional | Back alignment and domain information |
|---|
| >cd02691 PurM-like2 AIR synthase (PurM) related protein, archaeal subgroup 2 of unknown function | Back alignment and domain information |
|---|
| >COG2144 Selenophosphate synthetase-related proteins [General function prediction only] | Back alignment and domain information |
|---|
| >PRK00943 selenophosphate synthetase; Provisional | Back alignment and domain information |
|---|
| >TIGR00476 selD selenium donor protein | Back alignment and domain information |
|---|
| >COG0046 PurL Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >PRK14105 selenophosphate synthetase; Provisional | Back alignment and domain information |
|---|
| >COG0309 HypE Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >TIGR01857 FGAM-synthase phosphoribosylformylglycinamidine synthase, clade II | Back alignment and domain information |
|---|
| >PLN02557 phosphoribosylformylglycinamidine cyclo-ligase | Back alignment and domain information |
|---|
| >COG0611 ThiL Thiamine monophosphate kinase [Coenzyme metabolism] | Back alignment and domain information |
|---|
| >PF02769 AIRS_C: AIR synthase related protein, C-terminal domain; InterPro: IPR010918 This entry includes Hydrogen expression/formation protein, HypE, which may be involved in the maturation of NifE hydrogenase; AIR synthase and FGAM synthase, which are involved in de novo purine biosynthesis; and selenide, water dikinase, an enzyme which synthesizes selenophosphate from selenide and ATP | Back alignment and domain information |
|---|
| >PF00586 AIRS: AIR synthase related protein, N-terminal domain; InterPro: IPR000728 This family includes Hydrogen expression/formation protein, HypE, which may be involved in the maturation of NifE hydrogenase; AIR synthase and FGAM synthase, which are involved in de novo purine biosynthesis; and selenide, water dikinase, an enzyme which synthesizes selenophosphate from selenide and ATP | Back alignment and domain information |
|---|
| >cd02193 PurL Formylglycinamide ribonucleotide amidotransferase (FGAR-AT) catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to formylglycinamidine ribonucleotide (FGAM), ADP, phosphate, and glutamate in the fourth step of the purine biosynthetic pathway | Back alignment and domain information |
|---|
| >COG0150 PurM Phosphoribosylaminoimidazole (AIR) synthetase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >COG1973 HypE Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF00586 AIRS: AIR synthase related protein, N-terminal domain; InterPro: IPR000728 This family includes Hydrogen expression/formation protein, HypE, which may be involved in the maturation of NifE hydrogenase; AIR synthase and FGAM synthase, which are involved in de novo purine biosynthesis; and selenide, water dikinase, an enzyme which synthesizes selenophosphate from selenide and ATP | Back alignment and domain information |
|---|
| >COG0709 SelD Selenophosphate synthase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >cd02203 PurL_repeat1 PurL subunit of the formylglycinamide ribonucleotide amidotransferase (FGAR-AT), first repeat | Back alignment and domain information |
|---|
| >cd00396 PurM-like AIR (aminoimidazole ribonucleotide) synthase related protein | Back alignment and domain information |
|---|
| >TIGR01379 thiL thiamine-monophosphate kinase | Back alignment and domain information |
|---|
| >PRK05731 thiamine monophosphate kinase; Provisional | Back alignment and domain information |
|---|
| >PRK06423 phosphoribosylformylglycinamidine synthase; Provisional | Back alignment and domain information |
|---|
| >TIGR03267 methan_mark_2 putative methanogenesis marker protein 2 | Back alignment and domain information |
|---|
| >TIGR01739 tegu_FGAM_synt herpesvirus tegument protein/v-FGAM-synthase | Back alignment and domain information |
|---|
| >PRK05974 phosphoribosylformylglycinamidine synthase subunit PurS; Reviewed | Back alignment and domain information |
|---|
| >KOG3939|consensus | Back alignment and domain information |
|---|
| >KOG0237|consensus | Back alignment and domain information |
|---|
| >TIGR00302 phosphoribosylformylglycinamidine synthase, purS protein | Back alignment and domain information |
|---|
| >cd02195 SelD Selenophosphate synthetase (SelD) catalyzes the conversion of selenium to selenophosphate which is required by a number of bacterial, archaeal and eukaryotic organisms for synthesis of Secys-tRNA, the precursor of selenocysteine in selenoenzymes | Back alignment and domain information |
|---|
| >cd02194 ThiL ThiL (Thiamine-monophosphate kinase) plays a dual role in de novo biosynthesis and in salvage of exogenous thiamine | Back alignment and domain information |
|---|
| >PF02700 PurS: Phosphoribosylformylglycinamidine (FGAM) synthase; InterPro: IPR003850 Phosphoribosylformylglycinamidine(FGAM) synthetase, 6 | Back alignment and domain information |
|---|
| >cd02192 PurM-like3 AIR synthase (PurM) related protein, subgroup 3 of unknown function | Back alignment and domain information |
|---|
| >PRK00943 selenophosphate synthetase; Provisional | Back alignment and domain information |
|---|
| >PRK06423 phosphoribosylformylglycinamidine synthase; Provisional | Back alignment and domain information |
|---|
| >PRK05974 phosphoribosylformylglycinamidine synthase subunit PurS; Reviewed | Back alignment and domain information |
|---|
| >cd02204 PurL_repeat2 PurL subunit of the formylglycinamide ribonucleotide amidotransferase (FGAR-AT), second repeat | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 685 | ||||
| 1t3t_A | 1303 | Structure Of Formylglycinamide Synthetase Length = | 5e-44 | ||
| 1t3t_A | 1303 | Structure Of Formylglycinamide Synthetase Length = | 5e-29 | ||
| 3ugj_A | 1303 | Formyl Glycinamide Ribonucletide Amidotransferase F | 5e-44 | ||
| 3ugj_A | 1303 | Formyl Glycinamide Ribonucletide Amidotransferase F | 5e-29 | ||
| 3d54_A | 629 | Stucture Of Purlqs From Thermotoga Maritima Length | 1e-04 | ||
| 2hs0_A | 603 | T. Maritima Purl Complexed With Atp Length = 603 | 1e-04 | ||
| 1vk3_A | 615 | Crystal Structure Of Phosphoribosylformylglycinamid | 2e-04 | ||
| 3viu_A | 725 | Crystal Structure Of Purl From Thermus Thermophilus | 3e-04 |
| >pdb|1T3T|A Chain A, Structure Of Formylglycinamide Synthetase Length = 1303 | Back alignment and structure |
|
| >pdb|1T3T|A Chain A, Structure Of Formylglycinamide Synthetase Length = 1303 | Back alignment and structure |
| >pdb|3UGJ|A Chain A, Formyl Glycinamide Ribonucletide Amidotransferase From Salmonella Typhimurum: Role Of The Atp Complexation And Glutaminase Domain In Catalytic Coupling Length = 1303 | Back alignment and structure |
| >pdb|3UGJ|A Chain A, Formyl Glycinamide Ribonucletide Amidotransferase From Salmonella Typhimurum: Role Of The Atp Complexation And Glutaminase Domain In Catalytic Coupling Length = 1303 | Back alignment and structure |
| >pdb|3D54|A Chain A, Stucture Of Purlqs From Thermotoga Maritima Length = 629 | Back alignment and structure |
| >pdb|2HS0|A Chain A, T. Maritima Purl Complexed With Atp Length = 603 | Back alignment and structure |
| >pdb|1VK3|A Chain A, Crystal Structure Of Phosphoribosylformylglycinamidine Synthase Ii (Tm1246) From Thermotoga Maritima At 2.15 A Resolution Length = 615 | Back alignment and structure |
| >pdb|3VIU|A Chain A, Crystal Structure Of Purl From Thermus Thermophilus Length = 725 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3ugj_A Phosphoribosylformylglycinamidine synthase; amidotransferase, glutaminase, thioester intermediate, ligas; HET: ADP; 1.78A {Salmonella enterica subsp} PDB: 1t3t_A* 3ujn_A* 3umm_A* Length = 1303 | Back alignment and structure |
|---|
Score = 368 bits (946), Expect = e-113
Identities = 109/369 (29%), Positives = 172/369 (46%), Gaps = 37/369 (10%)
Query: 106 KKLKAVPKVISDIESELCYNIEISRELTPVELDKLHWILNSSFECRKLSSHTNFKDNSNV 165
+ +A + +I +E + +++ L E +L +L + ++ +
Sbjct: 29 ARFQAANLQVHNIYAEYVHFADLNAPLNDSEQAQLTRLLQYG------PALSSHTPAGKL 82
Query: 166 IEVGPRLNFSTPFCSNVLSICQSI------------------------QLHSCAESFYDR 201
+ V PR +P+ S I + Q A +DR
Sbjct: 83 LLVTPRPGTISPWSSKATDIAHNCGLQQVDRLERGVAYYIEASTLTAEQWRQVAAELHDR 142
Query: 202 MTECVYSSP--LTSFNHGIKPDPWFYVDVMGKGKVALQEVNQKLGLAFDEWDLEYYTDIF 259
M E V+SS +P P VD++G+G+ AL + N +LGLA E +++Y + F
Sbjct: 143 MMETVFSSLTDAEKLFIHHQPAPVSSVDLLGEGRQALIDANLRLGLALAEDEIDYLQEAF 202
Query: 260 RNKLKRNPTSVECFDLAQSNSEHSRHWFFKGKMIVDGIESDKCLFEMIMDTTKHSNQNNV 319
KL RNP +E + AQ+NSEH RH F I+DG K LF+MI +T + + +
Sbjct: 203 -TKLGRNPNDIELYMFAQANSEHCRHKIFNADWIIDGKPQPKSLFKMIKNTFETTPDYVL 261
Query: 320 IKFNDNSSAIQGYRDLPAITPTNPGAPGPYTITNQDLDIIFTAETHNFPTGVSPFSGATT 379
+ DN++ ++G + + G Y + I+ ETHN PT +SP+ GA T
Sbjct: 262 SAYKDNAAVMEGSA-VGRYFADHN--TGRYDFHQEPAHILMKVETHNHPTAISPWPGAAT 318
Query: 380 GTGGRIRDVQAVGRGGNCIAGTAGYCVGNLNIPGYKLPWEDEQYGYPNNFATPLNILIEA 439
G+GG IRD A GRG AG G+ V NL IPG++ PWE++ +G P T L+I+ E
Sbjct: 319 GSGGEIRDEGATGRGAKPKAGLVGFSVSNLRIPGFEQPWEED-FGKPERIVTALDIMTEG 377
Query: 440 SNGASDYGN 448
G + + N
Sbjct: 378 PLGGAAFNN 386
|
| >3ugj_A Phosphoribosylformylglycinamidine synthase; amidotransferase, glutaminase, thioester intermediate, ligas; HET: ADP; 1.78A {Salmonella enterica subsp} PDB: 1t3t_A* 3ujn_A* 3umm_A* Length = 1303 | Back alignment and structure |
|---|
| >3ugj_A Phosphoribosylformylglycinamidine synthase; amidotransferase, glutaminase, thioester intermediate, ligas; HET: ADP; 1.78A {Salmonella enterica subsp} PDB: 1t3t_A* 3ujn_A* 3umm_A* Length = 1303 | Back alignment and structure |
|---|
| >3ugj_A Phosphoribosylformylglycinamidine synthase; amidotransferase, glutaminase, thioester intermediate, ligas; HET: ADP; 1.78A {Salmonella enterica subsp} PDB: 1t3t_A* 3ujn_A* 3umm_A* Length = 1303 | Back alignment and structure |
|---|
| >1vk3_A Phosphoribosylformylglycinamidine synthase II; TM1246, structural genomics, JCSG, PSI, protein structure initiative; 2.15A {Thermotoga maritima} SCOP: d.79.4.1 d.79.4.1 d.139.1.1 d.139.1.1 PDB: 3d54_A* 2hs3_A* 2hs0_A* 2hs4_A* 2hru_A* 2hry_A* Length = 615 | Back alignment and structure |
|---|
| >1vk3_A Phosphoribosylformylglycinamidine synthase II; TM1246, structural genomics, JCSG, PSI, protein structure initiative; 2.15A {Thermotoga maritima} SCOP: d.79.4.1 d.79.4.1 d.139.1.1 d.139.1.1 PDB: 3d54_A* 2hs3_A* 2hs0_A* 2hs4_A* 2hru_A* 2hry_A* Length = 615 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 685 | |||
| 3ugj_A | 1303 | Phosphoribosylformylglycinamidine synthase; amidot | 100.0 | |
| 3ac6_A | 725 | Phosphoribosylformylglycinamidine synthase 2; puri | 100.0 | |
| 1vk3_A | 615 | Phosphoribosylformylglycinamidine synthase II; TM1 | 100.0 | |
| 1vk3_A | 615 | Phosphoribosylformylglycinamidine synthase II; TM1 | 99.81 | |
| 3vti_C | 314 | Hydrogenase maturation factor; transferase, carbam | 99.8 | |
| 2rb9_A | 334 | HYPE protein; hydrogenase maturation, dimer, enzym | 99.79 | |
| 2yxz_A | 311 | Thiamin-monophosphate kinase; alpha/beta structure | 99.79 | |
| 3fd5_A | 394 | Selenide, water dikinase 1; selenophosphate synthe | 99.78 | |
| 2z1u_A | 343 | Hydrogenase expression/formation protein HYPE; alp | 99.78 | |
| 2z01_A | 348 | Phosphoribosylformylglycinamidine cyclo-ligase; al | 99.78 | |
| 2yyd_A | 345 | Selenide, water dikinase; FULL-length selenophosph | 99.78 | |
| 2z1e_A | 338 | Hydrogenase expression/formation protein HYPE; [NI | 99.77 | |
| 3u0o_A | 347 | Selenide, water dikinase; ATP binding protein, sel | 99.76 | |
| 3ac6_A | 725 | Phosphoribosylformylglycinamidine synthase 2; puri | 99.76 | |
| 2btu_A | 346 | Phosphoribosyl-aminoimidazole synthetase; synthase | 99.74 | |
| 3mcq_A | 319 | Thiamine-monophosphate kinase; structural genomics | 99.73 | |
| 2zod_A | 345 | Selenide, water dikinase; FULL-length selenophosph | 99.7 | |
| 2v9y_A | 334 | Phosphoribosylformylglycinamidine cyclo-ligase; mu | 99.7 | |
| 3c9u_A | 342 | Thiamine monophosphate kinase; beta barrel, alpha- | 99.68 | |
| 3m84_A | 350 | Phosphoribosylformylglycinamidine cyclo-ligase; al | 99.65 | |
| 3p4e_A | 349 | Phosphoribosylformylglycinamidine cyclo-ligase; st | 99.61 | |
| 3ugj_A | 1303 | Phosphoribosylformylglycinamidine synthase; amidot | 99.58 | |
| 3kiz_A | 394 | Phosphoribosylformylglycinamidine cyclo-ligase; ST | 98.16 | |
| 3mdo_A | 389 | Putative phosphoribosylformylglycinamidine cyclo-; | 97.97 | |
| 3u0o_A | 347 | Selenide, water dikinase; ATP binding protein, sel | 96.56 | |
| 3mcq_A | 319 | Thiamine-monophosphate kinase; structural genomics | 96.02 | |
| 2yyd_A | 345 | Selenide, water dikinase; FULL-length selenophosph | 95.43 | |
| 2yxz_A | 311 | Thiamin-monophosphate kinase; alpha/beta structure | 93.56 | |
| 2zod_A | 345 | Selenide, water dikinase; FULL-length selenophosph | 93.48 | |
| 3c9u_A | 342 | Thiamine monophosphate kinase; beta barrel, alpha- | 91.82 | |
| 3fd5_A | 394 | Selenide, water dikinase 1; selenophosphate synthe | 90.85 | |
| 1vq3_A | 94 | Phosphoribosylformylglycinamidine synthase, PURS; | 89.96 | |
| 2yx5_A | 83 | UPF0062 protein MJ1593; anti parallel beta sheet, | 89.58 | |
| 2z1e_A | 338 | Hydrogenase expression/formation protein HYPE; [NI | 89.21 | |
| 1t4a_A | 84 | PURS; tetramer, complex formyl glycinamide synthet | 89.09 | |
| 1gtd_A | 85 | MTH169; synthetase, FGAM synthetase, purine synthe | 87.84 | |
| 2zw2_A | 92 | Putative uncharacterized protein STS178; purine me | 86.2 | |
| 2rb9_A | 334 | HYPE protein; hydrogenase maturation, dimer, enzym | 85.76 | |
| 2dgb_A | 84 | Hypothetical protein PURS; purine, structural geno | 84.88 | |
| 3vti_C | 314 | Hydrogenase maturation factor; transferase, carbam | 83.6 |
| >3ugj_A Phosphoribosylformylglycinamidine synthase; amidotransferase, glutaminase, thioester intermediate, ligas; HET: ADP; 1.78A {Salmonella enterica subsp} PDB: 1t3t_A* 3ujn_A* 3umm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-130 Score=1185.06 Aligned_cols=567 Identities=34% Similarity=0.552 Sum_probs=521.5
Q ss_pred EEEEEccCCCCChHHH---HHHHhcCCCCcceEEEEEEEEEecCCCCCHHHHHHHHhhccccccccccCCCCccCCCCcE
Q psy5568 89 AIIRYYSKPGIGAGEK---TKKLKAVPKVISDIESELCYNIEISRELTPVELDKLHWILNSSFECRKLSSHTNFKDNSNV 165 (685)
Q Consensus 89 ~ml~l~G~~als~fr~---l~~l~~~~~~V~~Vrte~vY~Vel~~~Ls~ee~~~L~~LLs~~~~~~~~~~~s~l~~~~~~ 165 (685)
.|++|+|.+|||+||. +++|++..+.|.+|+++|||+|+++++|++++.++|.|||++..... .. ...+.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~---~~---~~~~~~ 82 (1303)
T 3ugj_A 9 MMEILRGSPALSAFRINKLLARFQAANLQVHNIYAEYVHFADLNAPLNDSEQAQLTRLLQYGPALS---SH---TPAGKL 82 (1303)
T ss_dssp EEEEEEEEECCCHHHHHHHHHHHHHTTCCCCEEEEEEEEEEEESSCCCHHHHHHHHHHTCCSCCCC---CC---CCCSEE
T ss_pred eEEEeCCCccCCHHHHHHHHHHHHhcCCCccEEEEEEEEEEecCCCCCHHHHHHHHHHhcCCcccc---cc---CCCcce
Confidence 4889999999999998 88899988999999999999999888999999999999999753221 00 112467
Q ss_pred EEEecCCCcCChhhhhHHHHHHHcCcch------------------------hhhhhcccccceeecC---cccccCCCC
Q psy5568 166 IEVGPRLNFSTPFCSNVLSICQSIQLHS------------------------CAESFYDRMTECVYSS---PLTSFNHGI 218 (685)
Q Consensus 166 ieV~PR~G~~spwss~a~~i~~~~gl~~------------------------~~~~L~d~mte~~~~~---~~~~f~~~~ 218 (685)
++|+||+||+|||||||++|+|+|||.. +..+|||||||+++.. +..+|.+.
T Consensus 83 ~~v~pr~g~~spwss~a~~i~~~~gl~~v~rie~~~~~~~~~~~~~~~~~~~~~~~l~d~m~e~~~~~~~~~~~lf~~~- 161 (1303)
T 3ugj_A 83 LLVTPRPGTISPWSSKATDIAHNCGLQQVDRLERGVAYYIEASTLTAEQWRQVAAELHDRMMETVFSSLTDAEKLFIHH- 161 (1303)
T ss_dssp EEEEECTTCCCHHHHHHHHHHHHTTCTTEEEEEEEEEEEEECTTCCHHHHHHHHHHTSCTTTEEEESSGGGGGGGGCCC-
T ss_pred EEEEcCCCcCChhHHHHHHHHHHcCCcccceEEEEEEEEEecCCCCHHHHHHHHHhcCCCCccEEecCchhhhhhcccC-
Confidence 9999999999999999999999999953 4468999999999876 57889865
Q ss_pred CCCCceEeeccCCCHHHHHHHHHhcCCCCChhhHHHHHHHHHhhcCCCCcHHHHHhhhhhhcccccccccceeEEECCcc
Q psy5568 219 KPDPWFYVDVMGKGKVALQEVNQKLGLAFDEWDLEYYTDIFRNKLKRNPTSVECFDLAQSNSEHSRHWFFKGKMIVDGIE 298 (685)
Q Consensus 219 ~p~~~~~v~l~~~~~~~L~~~~~~~gLal~~~e~~~i~~~f~~~l~R~PtdvEl~~~aq~wSEHCrhk~F~~~~~idg~~ 298 (685)
+|+|+.+||+++.++++|+++|+++||||+++||+||++|| +.|||+|||+||+||+|+||||||||+||++|+|||++
T Consensus 162 ~p~~~~~v~~~~~~~~~L~~~~~~~gLaL~~~e~~~i~~~f-~~lgR~Pt~~El~~~~~~wSEHCrhk~f~~~~~id~~~ 240 (1303)
T 3ugj_A 162 QPAPVSSVDLLGEGRQALIDANLRLGLALAEDEIDYLQEAF-TKLGRNPNDIELYMFAQANSEHCRHKIFNADWIIDGKP 240 (1303)
T ss_dssp CCCCCCBCCHHHHTTHHHHHHHHHTTCCCCHHHHHHHHHHH-HHHTSCCBHHHHHHHHHHTSHHHHCHHHHSEEEETTEE
T ss_pred CCCceeEEeCCCCCHHHHHHHHhcCCCCCCHHHHHHHHHHH-HhcCCCCCHHHHHHHHHHhhhhccccccCCceEEcCcc
Confidence 89999999999999999999999999999999999999999 58999999999999999999999999999999999999
Q ss_pred ChHhHHHHhhhhccccCCCceeecccccceeeccccCCccccCCCCCCCCceecccceeEEEeeCCCCCCccccCCCCcc
Q psy5568 299 SDKCLFEMIMDTTKHSNQNNVIKFNDNSSAIQGYRDLPAITPTNPGAPGPYTITNQDLDIIFTAETHNFPTGVSPFSGAT 378 (685)
Q Consensus 299 ~~~sL~~~i~~t~~~~~~~~v~~~~dna~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~k~ETHNhPsai~Pf~GAa 378 (685)
++++||+||++|++..++++|++|+||||||++.. ..+|.|+.. ...|+.++++|+++||||||||||+||||+|||
T Consensus 241 ~~~~l~~~i~~t~~~~~~~~~~~~~dna~vi~~~~-~~~~~~~~~--~~~~~~~~e~~~v~fK~ETHNHPsaIePf~GAa 317 (1303)
T 3ugj_A 241 QPKSLFKMIKNTFETTPDYVLSAYKDNAAVMEGSA-VGRYFADHN--TGRYDFHQEPAHILMKVETHNHPTAISPWPGAA 317 (1303)
T ss_dssp ESSCHHHHHHHHHHHCCTTEEECSSSSSEEEEEEE-EEEEEECTT--TCBEEEEEEEEEEEEEEEECHHHHHHCHHHHHH
T ss_pred cchhHHHHHHHHHHhCCCcEEEEecCccEEeeecc-cccccccCC--ccccccccceeEEEEEEeccCCCCccCCcCccc
Confidence 99999999999999889999999999999999865 677887532 236888999999999999999999999999999
Q ss_pred ccccceeeeecccCCCCeeeecccceEeccCCCCCCCCCCCcccCCCCCCCcchHHHHHHhcccccCCCCC--CC-----
Q psy5568 379 TGTGGRIRDVQAVGRGGNCIAGTAGYCVGNLNIPGYKLPWEDEQYGYPNNFATPLNILIEASNGASDYGNI--EP----- 451 (685)
Q Consensus 379 TG~GG~iRD~~~~GrGa~pia~~~~~~~g~l~ip~~~~pwe~~~~~~p~~~~~~~~i~~~~~~G~s~YgN~--~P----- 451 (685)
||+||+|||+++|||||||||++++||||+|++|++.+|||+ .+++|.++++|++||++++.|+++|||+ +|
T Consensus 318 TGvGG~iRD~~~~G~GarPiA~~~~~~~~~lr~~~~~~p~e~-~~g~p~~~~~~~~i~~~g~~G~s~ygN~~Gvp~V~G~ 396 (1303)
T 3ugj_A 318 TGSGGEIRDEGATGRGAKPKAGLVGFSVSNLRIPGFEQPWEE-DFGKPERIVTALDIMTEGPLGGAAFNNEFGRPALTGY 396 (1303)
T ss_dssp HHHHHHHHHHHTSTTCCEEEEEEEEEEESCCCCTTCCCTTCC-CCCCCTTSCCHHHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred ceeEEEEEchhccCCCCEeeeeeeeeeeccccCCCCCCcccc-ccCCchhccChhhhhhcccchHHHHHHhcCCCCcceE
Confidence 999999999999999999999999999999999999999985 5899999999999999999999999988 54
Q ss_pred --------------------------------------------------------------------------------
Q psy5568 452 -------------------------------------------------------------------------------- 451 (685)
Q Consensus 452 -------------------------------------------------------------------------------- 451 (685)
T Consensus 397 ~~~~~~~~~~~~~~~~~g~~kp~v~~~gvG~i~~~~~~~~~~~~Gd~Iiv~Gg~tgr~G~gGaa~sS~~~~~~~~~~~~~ 476 (1303)
T 3ugj_A 397 FRTYEEKVNSHNGEELRGYHKPIMLAGGIGNIRADHVQKGEIVVGAKLIVLGGPAMNIGLGGGAASSMASGQSDADLDFA 476 (1303)
T ss_dssp EEECEEEEEETTEEEEEECSSCEEEEEEEEEECGGGSSCCCCCTTCEEEEEECCBCTTCC-----------------CGG
T ss_pred EEEEeeeccccccccccccCCceeEEEEEEEEehHHcccccCCCCCEEEEECCCCCcccCcHHHHhHHhhcccccccCch
Confidence
Q ss_pred -------------------CCC----------------------------------------------------------
Q psy5568 452 -------------------CSN---------------------------------------------------------- 454 (685)
Q Consensus 452 -------------------c~~---------------------------------------------------------- 454 (685)
|.+
T Consensus 477 ~VQ~g~p~~ek~~~~li~~~lel~~~~~V~a~~D~t~GGL~~~l~Ema~~sgvG~~Idld~vP~~~~gl~p~ei~~sesq 556 (1303)
T 3ugj_A 477 SVQRDNPEMERRCQEVIDRCWQLGDANPILFIHDVGAGGLSNAMPELVSDGGRGGKFELRDILSDEPGMSPLEIWCNESQ 556 (1303)
T ss_dssp GCCCCCHHHHHHHHHHHHHHHTTGGGCCEEEEEECCTTTHHHHHHHHHHHTTCEEEEEGGGSCBSCTTCCHHHHHHCCCS
T ss_pred hhccCCHHHHHHHHHHHHHHHHHhccCCeeEEEECCCcHHHHHHHHHHHHcCCeEEEEhhhCCCCccCCCHHHHHhCcCc
Confidence 000
Q ss_pred --------------------------------------------------------------------------------
Q psy5568 455 -------------------------------------------------------------------------------- 454 (685)
Q Consensus 455 -------------------------------------------------------------------------------- 454 (685)
T Consensus 557 erml~~V~pe~~~~~~~~~~~~g~~a~vIG~Vt~~~~v~l~~~~~g~~v~dlp~~~L~~~~p~~~~~~~~~~~~~~~~~~ 636 (1303)
T 3ugj_A 557 ERYVLAVAADQLPLFDELCKRERAPYAVIGDATEEQHLSLHDNHFDNQPIDLPLDVLLGKTPKMTRDVQTLKAKGDALNR 636 (1303)
T ss_dssp SEEEEEECGGGHHHHHHHHHHHTCCEEEEEEEESSCEEEEEETTTTEEEEEEEHHHHTCCCCCCEEEECCCCCCCCCCCC
T ss_pred ceEEEEECHHHHHHHHHHHHHcCCCeEEEEEEecCCeEEEEECCCCeEEEecchhhhcCCCCceeccccccCccccccCc
Confidence
Q ss_pred --------------------------------------------------C-----------ceeEEecccCCceeecCH
Q psy5568 455 --------------------------------------------------D-----------RAIATSIGEQPIKGLVDP 473 (685)
Q Consensus 455 --------------------------------------------------D-----------~G~A~s~G~~p~~~~~DP 473 (685)
| +|+|||+|++|+++.+||
T Consensus 637 ~~~~~~~~l~~vL~~pnvaSK~~l~~~~D~~V~g~tv~~~~vGp~q~p~~DaAVi~~~~~~~~gla~s~g~~p~~~~~dP 716 (1303)
T 3ugj_A 637 ADITIADAVKRVLHLPTVAEKTFLVTIGDRTVTGMVARDQMVGPWQVPVADCAVTTASLDSYYGEAMSIGERAPVALLDF 716 (1303)
T ss_dssp TTCCHHHHHHHHTTSTTTSCCHHHHTTSCSCTTSCEEECSEETTTTEECCSSEEEESSTTCSCEEEEEEEECGGGGGTCH
T ss_pred CcCCHHHHHHHHhcCCcccchhhHHHhcCcccCcceeeeccccCCCCCCCCeEEEEEeCCCCeEEEEEEecCCCccccCH
Confidence 1 689999999999999999
Q ss_pred HHHHHHHHHHHHhhhhccCCccccccccccccccCCCCCchHHHHHHHHHHHH-HHhhhhhcCCCccccCCeeeeeeece
Q psy5568 474 KRGARMAVAEALTNLVFAKISDLKDVKCSGNWMWAAKLPGEGAALFDACQAMS-WVLPARMGNTRREWIKPIMFSGGIGT 552 (685)
Q Consensus 474 ~~ga~~AV~EAl~Nl~a~Ga~pl~~v~~s~N~~~p~~~p~~~~~L~~av~g~~-d~c~~L~~~~~~~~~~gipivgGkdS 552 (685)
|+||++||+||++||+|+|+.|+..+++++|||||.++|++.++|+++++||+ |+|++| ||||+|||||
T Consensus 717 ~~ga~~AVaealsnlaA~Ga~pl~~v~lsln~~~~~g~P~~~~~L~~a~~g~~~d~c~~l----------gvpiiGGkdS 786 (1303)
T 3ugj_A 717 AASARLAVGEALTNIAATQIGDIKRIKLSANWMAAAGHPGEDAGLYDAVKAVGEELCPQL----------GLTIPVGKDS 786 (1303)
T ss_dssp HHHHHHHHHHHHHHHTTSCCCSGGGCEEEEEEECBTTSTTHHHHHHHHHHHHHTTHHHHH----------TCEEEEEEEE
T ss_pred HHHHHHHHHHHHHHhhcCCCccHHHeEeecccccccCCCchHHHHHHHHHHHHHHHHHHc----------CCCeeecccc
Confidence 99999999999999999999999999999999999888999999999999999 999999 9999999999
Q ss_pred eeccc--c--C--CcccCCcceEEEEEeeeCCCCcccCCCCcCCCCCCcceEEEEEcCCCcCccchhHHHHHhhhhcCCC
Q psy5568 553 MKHEL--K--E--KASPNVGSLVISTYAPCPDIRQVVTPDIKSPRLGYSSSLLWIDLSCGQHRVGGSALSQVLAEVRGPS 626 (685)
Q Consensus 553 m~~~~--~--~--~~v~ippTlvisa~g~v~d~~~~vtp~~k~~G~d~~s~lv~i~lg~~~~~lGGS~la~~~~~~g~~~ 626 (685)
|||++ + | +.++.||||+|+++|.|+|+++++||++|++| +.|||||+|.++.+||||+|+|+++++++.+
T Consensus 787 lsn~t~~~~~g~~~~v~~P~TlvitavG~v~dv~~~vt~~~k~~G----d~LilV~lg~~~~~LGGS~la~~~g~~g~~~ 862 (1303)
T 3ugj_A 787 MSMKTRWQEGNEQREMTSPLSLVISAFARVEDVRHTLTPQLSTED----NALLLIDLGKGHNALGATALAQVYRQLGDKP 862 (1303)
T ss_dssp CBCEEEECCC--CEEEECCCEEEEEEEEEESCGGGCCCSCCCCSS----EEEEEEETTTTCCCCTTSHHHHHTTCCCSCC
T ss_pred CccceecccCCCcCccCCCCceEEEEEEECCCcCcccCcccCCCC----CEEEEEECCCCCCCccHHHHHHHhCcccCCC
Confidence 99864 2 2 24678999999999999999999999999998 3788999999999999999999999999999
Q ss_pred CCcCCHHHHHHHHHHHHHHHHcCCcEEEEcCCcchHHHHHHHHHhcCCCCeEEEe
Q psy5568 627 PDVEDAAALVRAFNVTQRLIQDGQVLSGHDISDGGLLICLLEMDVGANSPKGWVK 681 (685)
Q Consensus 627 P~v~d~~~~k~~~~~v~~li~~glv~A~HDvSdGGL~~aLaEMa~ag~~G~~I~~ 681 (685)
|++++++.++++++++++|+++|+|+|+||+|+|||++||+|||+++++|++|+.
T Consensus 863 P~vd~~~~lk~~~~~v~~li~~G~v~AahDvSdGGLa~aL~Ema~as~vG~~Idl 917 (1303)
T 3ugj_A 863 ADVRDVAQLKGFYDAMQALVAARKLLAWHDRSDGGLLVTLAEMAFAGHCGVQVDI 917 (1303)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHTTCCSEEEECCTTHHHHHHHHHHHHHTSEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHHHHcCCeEEEEeCCCChHHHHHHHHHHhCCceEEEEe
Confidence 9996699999999999999999999999999999999999999999999999863
|
| >1vk3_A Phosphoribosylformylglycinamidine synthase II; TM1246, structural genomics, JCSG, PSI, protein structure initiative; 2.15A {Thermotoga maritima} SCOP: d.79.4.1 d.79.4.1 d.139.1.1 d.139.1.1 PDB: 3d54_A* 2hs3_A* 2hs0_A* 2hs4_A* 2hru_A* 2hry_A* | Back alignment and structure |
|---|
| >1vk3_A Phosphoribosylformylglycinamidine synthase II; TM1246, structural genomics, JCSG, PSI, protein structure initiative; 2.15A {Thermotoga maritima} SCOP: d.79.4.1 d.79.4.1 d.139.1.1 d.139.1.1 PDB: 3d54_A* 2hs3_A* 2hs0_A* 2hs4_A* 2hru_A* 2hry_A* | Back alignment and structure |
|---|
| >3vti_C Hydrogenase maturation factor; transferase, carbamoyltransfer, maturation of [NIFE]-hydroge nitrIle synthesis, iron; 2.56A {Thermoanaerobacter tengcongensis} | Back alignment and structure |
|---|
| >2rb9_A HYPE protein; hydrogenase maturation, dimer, enzyme, X- RAY crystallography, structural genomics, BSGI; 2.00A {Escherichia coli O157} PDB: 2i6r_A | Back alignment and structure |
|---|
| >2yxz_A Thiamin-monophosphate kinase; alpha/beta structure, transferase; 1.90A {Thermus thermophilus} | Back alignment and structure |
|---|
| >3fd5_A Selenide, water dikinase 1; selenophosphate synthetase, SELD, ATP-binding, nucleotide-binding, selenium, transferase; HET: AP2; 1.90A {Homo sapiens} PDB: 3fd6_A* | Back alignment and structure |
|---|
| >2z1u_A Hydrogenase expression/formation protein HYPE; alpha-beta fold, beta barrel, lyase; HET: ATP; 2.00A {Desulfovibrio vulgaris subsp} PDB: 2z1t_A* | Back alignment and structure |
|---|
| >2z01_A Phosphoribosylformylglycinamidine cyclo-ligase; alpha and beta proteins, cytoplasm, purine biosynthesis, structural genomics, NPPSFA; 2.20A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
| >2z1e_A Hydrogenase expression/formation protein HYPE; [NIFE] hydrogenase maturation, ATPase, transferase; 1.55A {Thermococcus kodakarensis} SCOP: d.79.4.1 d.139.1.1 PDB: 2z1f_A | Back alignment and structure |
|---|
| >3u0o_A Selenide, water dikinase; ATP binding protein, selenophosphate synthesis, transferase; 2.25A {Escherichia coli} | Back alignment and structure |
|---|
| >2btu_A Phosphoribosyl-aminoimidazole synthetase; synthase, PURM, de novo purine biosynthesis, AIR synthase family, spine, FGAR amidotransferase; 2.31A {Bacillus anthracis} | Back alignment and structure |
|---|
| >3mcq_A Thiamine-monophosphate kinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE PGE PG4 1PE; 1.91A {Methylobacillus flagellatus} | Back alignment and structure |
|---|
| >2zod_A Selenide, water dikinase; FULL-length selenophosphate synthetase, transferase, ATP- binding, magnesium, nucleotide-binding, selenium; 1.98A {Aquifex aeolicus} SCOP: d.79.4.1 d.139.1.1 PDB: 2yye_A 2zau_A | Back alignment and structure |
|---|
| >2v9y_A Phosphoribosylformylglycinamidine cyclo-ligase; multifunctional enzyme, structural genomics consortium, nucleotide-binding, purine biosynthesis; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
| >3c9u_A Thiamine monophosphate kinase; beta barrel, alpha-beta structure, transferase; HET: TPP ADP; 1.48A {Aquifex aeolicus} SCOP: d.79.4.1 d.139.1.1 PDB: 3c9r_A* 3c9t_A* 3c9s_A* 1vqv_A | Back alignment and structure |
|---|
| >3m84_A Phosphoribosylformylglycinamidine cyclo-ligase; alpha-beta fold, csgid, ATP-binding, nucleotide-BIND purine biosynthesis; HET: MSE AMP TRS; 1.70A {Francisella tularensis subsp} PDB: 3qty_A* | Back alignment and structure |
|---|
| >3p4e_A Phosphoribosylformylglycinamidine cyclo-ligase; structural genomics, center for structural genomics of infec diseases, csgid; HET: AMP CIT; 1.77A {Vibrio cholerae} PDB: 1cli_A | Back alignment and structure |
|---|
| >3ugj_A Phosphoribosylformylglycinamidine synthase; amidotransferase, glutaminase, thioester intermediate, ligas; HET: ADP; 1.78A {Salmonella enterica subsp} PDB: 1t3t_A* 3ujn_A* 3umm_A* | Back alignment and structure |
|---|
| >3kiz_A Phosphoribosylformylglycinamidine cyclo-ligase; STR genomics, joint center for structural genomics, JCSG; 1.50A {Cytophaga hutchinsonii atcc 33406} | Back alignment and structure |
|---|
| >3mdo_A Putative phosphoribosylformylglycinamidine cyclo-; structural genomics, joint center for structural genomics; HET: MSE PGE P6G PG4; 1.91A {Parabacteroides distasonis} | Back alignment and structure |
|---|
| >3u0o_A Selenide, water dikinase; ATP binding protein, selenophosphate synthesis, transferase; 2.25A {Escherichia coli} | Back alignment and structure |
|---|
| >3mcq_A Thiamine-monophosphate kinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE PGE PG4 1PE; 1.91A {Methylobacillus flagellatus} | Back alignment and structure |
|---|
| >2yxz_A Thiamin-monophosphate kinase; alpha/beta structure, transferase; 1.90A {Thermus thermophilus} | Back alignment and structure |
|---|
| >2zod_A Selenide, water dikinase; FULL-length selenophosphate synthetase, transferase, ATP- binding, magnesium, nucleotide-binding, selenium; 1.98A {Aquifex aeolicus} SCOP: d.79.4.1 d.139.1.1 PDB: 2yye_A 2zau_A | Back alignment and structure |
|---|
| >3c9u_A Thiamine monophosphate kinase; beta barrel, alpha-beta structure, transferase; HET: TPP ADP; 1.48A {Aquifex aeolicus} SCOP: d.79.4.1 d.139.1.1 PDB: 3c9r_A* 3c9t_A* 3c9s_A* 1vqv_A | Back alignment and structure |
|---|
| >3fd5_A Selenide, water dikinase 1; selenophosphate synthetase, SELD, ATP-binding, nucleotide-binding, selenium, transferase; HET: AP2; 1.90A {Homo sapiens} PDB: 3fd6_A* | Back alignment and structure |
|---|
| >1vq3_A Phosphoribosylformylglycinamidine synthase, PURS; TM1244, PURS SUB 6.3.5.3), structural genomics, joint center for structural JCSG; 1.90A {Thermotoga maritima} SCOP: d.284.1.1 PDB: 3d54_B* | Back alignment and structure |
|---|
| >2yx5_A UPF0062 protein MJ1593; anti parallel beta sheet, NPPSFA, national project on protei structural and functional analyses; 2.30A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
| >2z1e_A Hydrogenase expression/formation protein HYPE; [NIFE] hydrogenase maturation, ATPase, transferase; 1.55A {Thermococcus kodakarensis} SCOP: d.79.4.1 d.139.1.1 PDB: 2z1f_A | Back alignment and structure |
|---|
| >1t4a_A PURS; tetramer, complex formyl glycinamide synthetase, FGAR, structural protein; 2.00A {Bacillus subtilis} SCOP: d.284.1.1 PDB: 1twj_A | Back alignment and structure |
|---|
| >1gtd_A MTH169; synthetase, FGAM synthetase, purine synthesis pathway, PSI, protein structure initiative, NESG; 2.56A {Methanobacterium thermoautotrophicum} SCOP: d.284.1.1 | Back alignment and structure |
|---|
| >2zw2_A Putative uncharacterized protein STS178; purine metabolism, ligase; 1.55A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
| >2rb9_A HYPE protein; hydrogenase maturation, dimer, enzyme, X- RAY crystallography, structural genomics, BSGI; 2.00A {Escherichia coli O157} PDB: 2i6r_A | Back alignment and structure |
|---|
| >2dgb_A Hypothetical protein PURS; purine, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.10A {Thermus thermophilus} PDB: 2cuw_A | Back alignment and structure |
|---|
| >3vti_C Hydrogenase maturation factor; transferase, carbamoyltransfer, maturation of [NIFE]-hydroge nitrIle synthesis, iron; 2.56A {Thermoanaerobacter tengcongensis} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 685 | ||||
| d1t3ta4 | 209 | d.79.4.1 (A:221-429) FGAM synthase PurL, PurM-like | 1e-42 | |
| d1t3ta4 | 209 | d.79.4.1 (A:221-429) FGAM synthase PurL, PurM-like | 5e-14 | |
| d1t3ta4 | 209 | d.79.4.1 (A:221-429) FGAM synthase PurL, PurM-like | 0.003 | |
| d1t3ta1 | 68 | a.5.10.1 (A:153-220) FGAM synthase PurL, linker do | 8e-26 | |
| d1t3ta5 | 200 | d.79.4.1 (A:617-816) FGAM synthase PurL, PurM-like | 4e-21 | |
| d1vk3a1 | 165 | d.79.4.1 (A:2-166) Phosphoribosylformylglycinamidi | 2e-16 | |
| d1vk3a1 | 165 | d.79.4.1 (A:2-166) Phosphoribosylformylglycinamidi | 1e-04 | |
| d1vk3a1 | 165 | d.79.4.1 (A:2-166) Phosphoribosylformylglycinamidi | 2e-04 | |
| d1t3ta7 | 217 | d.139.1.1 (A:817-1033) FGAM synthase PurL, PurM-li | 2e-15 | |
| d1t3ta3 | 152 | d.284.1.2 (A:1-152) FGAM synthase PurL, PurS-like | 3e-15 |
| >d1t3ta4 d.79.4.1 (A:221-429) FGAM synthase PurL, PurM-like module, N1 and N2 domains {Salmonella typhimurium [TaxId: 90371]} Length = 209 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Bacillus chorismate mutase-like superfamily: PurM N-terminal domain-like family: PurM N-terminal domain-like domain: FGAM synthase PurL, PurM-like module, N1 and N2 domains species: Salmonella typhimurium [TaxId: 90371]
Score = 151 bits (382), Expect = 1e-42
Identities = 57/162 (35%), Positives = 83/162 (51%), Gaps = 4/162 (2%)
Query: 288 FKGKMIVDGIESDKCLFEMIMDTTKHSNQNNVIKFNDNSSAIQGYRDLPAITPTNPGAPG 347
F I+DG K LF+MI +T + + + + DN++ ++G G
Sbjct: 2 FNADWIIDGKPQPKSLFKMIKNTFETTPDYVLSAYKDNAAVMEGS---AVGRYFADHNTG 58
Query: 348 PYTITNQDLDIIFTAETHNFPTGVSPFSGATTGTGGRIRDVQAVGRGGNCIAGTAGYCVG 407
Y + I+ ETHN PT +SP+ GA TG+GG IRD A GRG AG G+ V
Sbjct: 59 RYDFHQEPAHILMKVETHNHPTAISPWPGAATGSGGEIRDEGATGRGAKPKAGLVGFSVS 118
Query: 408 NLNIPGYKLPWEDEQYGYPNNFATPLNILIEASNGASDYGNI 449
NL IPG++ PWE++ +G P T L+I+ E G + + N
Sbjct: 119 NLRIPGFEQPWEED-FGKPERIVTALDIMTEGPLGGAAFNNE 159
|
| >d1t3ta4 d.79.4.1 (A:221-429) FGAM synthase PurL, PurM-like module, N1 and N2 domains {Salmonella typhimurium [TaxId: 90371]} Length = 209 | Back information, alignment and structure |
|---|
| >d1t3ta4 d.79.4.1 (A:221-429) FGAM synthase PurL, PurM-like module, N1 and N2 domains {Salmonella typhimurium [TaxId: 90371]} Length = 209 | Back information, alignment and structure |
|---|
| >d1t3ta1 a.5.10.1 (A:153-220) FGAM synthase PurL, linker domain {Salmonella typhimurium [TaxId: 90371]} Length = 68 | Back information, alignment and structure |
|---|
| >d1t3ta5 d.79.4.1 (A:617-816) FGAM synthase PurL, PurM-like module, N1 and N2 domains {Salmonella typhimurium [TaxId: 90371]} Length = 200 | Back information, alignment and structure |
|---|
| >d1vk3a1 d.79.4.1 (A:2-166) Phosphoribosylformylglycinamidine synthase II, domains 1 and 3 {Thermotoga maritima [TaxId: 2336]} Length = 165 | Back information, alignment and structure |
|---|
| >d1vk3a1 d.79.4.1 (A:2-166) Phosphoribosylformylglycinamidine synthase II, domains 1 and 3 {Thermotoga maritima [TaxId: 2336]} Length = 165 | Back information, alignment and structure |
|---|
| >d1vk3a1 d.79.4.1 (A:2-166) Phosphoribosylformylglycinamidine synthase II, domains 1 and 3 {Thermotoga maritima [TaxId: 2336]} Length = 165 | Back information, alignment and structure |
|---|
| >d1t3ta7 d.139.1.1 (A:817-1033) FGAM synthase PurL, PurM-like module, C1 and C2 domains {Salmonella typhimurium [TaxId: 90371]} Length = 217 | Back information, alignment and structure |
|---|
| >d1t3ta3 d.284.1.2 (A:1-152) FGAM synthase PurL, PurS-like domain {Salmonella typhimurium [TaxId: 90371]} Length = 152 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 685 | |||
| d1t3ta4 | 209 | FGAM synthase PurL, PurM-like module, N1 and N2 do | 100.0 | |
| d1vk3a1 | 165 | Phosphoribosylformylglycinamidine synthase II, dom | 100.0 | |
| d1t3ta1 | 68 | FGAM synthase PurL, linker domain {Salmonella typh | 99.95 | |
| d1t3ta5 | 200 | FGAM synthase PurL, PurM-like module, N1 and N2 do | 99.93 | |
| d1t3ta3 | 152 | FGAM synthase PurL, PurS-like domain {Salmonella t | 99.92 | |
| d1vk3a2 | 162 | Phosphoribosylformylglycinamidine synthase II, dom | 99.91 | |
| d1t3ta7 | 217 | FGAM synthase PurL, PurM-like module, C1 and C2 do | 99.87 | |
| d1t3ta4 | 209 | FGAM synthase PurL, PurM-like module, N1 and N2 do | 99.79 | |
| d1vk3a3 | 179 | Phosphoribosylformylglycinamidine synthase II, dom | 99.45 | |
| d1vk3a1 | 165 | Phosphoribosylformylglycinamidine synthase II, dom | 98.72 | |
| d2z1ea1 | 113 | Hydrogenase expression/formation protein HypE {The | 98.63 | |
| d2z1ea2 | 179 | Hydrogenase expression/formation protein HypE {The | 98.57 | |
| d2zoda1 | 152 | Selenide, water dikinase SelD {Aquifex aeolicus [T | 98.39 | |
| d3c9ua1 | 137 | Thiamine monophosphate kinase (ThiL) N-terminal do | 98.3 | |
| d1vk3a2 | 162 | Phosphoribosylformylglycinamidine synthase II, dom | 98.22 | |
| d1t3ta6 | 187 | FGAM synthase PurL, PurM-like module, C1 and C2 do | 98.16 | |
| d3c9ua2 | 163 | Thiamine monophosphate kinase (ThiL) C-terminal do | 96.66 | |
| d1clia1 | 166 | Aminoimidazole ribonucleotide synthetase (PurM) N- | 95.71 | |
| d1vq3a_ | 86 | PurS subunit of FGAM synthetase {Thermotoga mariti | 93.97 | |
| d2zoda2 | 182 | Selenide, water dikinase SelD {Aquifex aeolicus [T | 93.83 | |
| d1gtda_ | 82 | PurS subunit of FGAM synthetase {Archaeon Methanob | 92.25 | |
| d1t4aa_ | 80 | PurS subunit of FGAM synthetase {Bacillus subtilis | 91.2 |
| >d1t3ta4 d.79.4.1 (A:221-429) FGAM synthase PurL, PurM-like module, N1 and N2 domains {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Bacillus chorismate mutase-like superfamily: PurM N-terminal domain-like family: PurM N-terminal domain-like domain: FGAM synthase PurL, PurM-like module, N1 and N2 domains species: Salmonella typhimurium [TaxId: 90371]
Probab=100.00 E-value=2.8e-50 Score=399.48 Aligned_cols=163 Identities=36% Similarity=0.696 Sum_probs=154.5
Q ss_pred ccceeEEECCccChHhHHHHhhhhccccCCCceeecccccceeeccccCCccccCCCCCCCCceecccceeEEEeeCCCC
Q psy5568 287 FFKGKMIVDGIESDKCLFEMIMDTTKHSNQNNVIKFNDNSSAIQGYRDLPAITPTNPGAPGPYTITNQDLDIIFTAETHN 366 (685)
Q Consensus 287 ~F~~~~~idg~~~~~sL~~~i~~t~~~~~~~~v~~~~dna~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~k~ETHN 366 (685)
||||+|+|||+++++|||+|||+|++..++++++||+|||++|++++ ..++.|.. ..+.|..++++++++||+||||
T Consensus 1 IFNa~~~IDG~~~~~SLF~mIk~T~~~~~~~~~~ay~DNa~vI~g~~-~~~l~~~~--~~~~~~~~~~~~~~~~k~EtHN 77 (209)
T d1t3ta4 1 IFNADWIIDGKPQPKSLFKMIKNTFETTPDYVLSAYKDNAAVMEGSA-VGRYFADH--NTGRYDFHQEPAHILMKVETHN 77 (209)
T ss_dssp HHHCEEEETTEEESSCHHHHHHHHHHHCCTTEEECSSSSSEEEEEEE-EEEEEECT--TTCBEEEEEEEEEEEEEEEECH
T ss_pred CcceEEEEcCcCcCcCHHHHHHHHHhhCCCceEEEecCchhhhcccc-cceEEeec--CcccccccccceEEEEEeecCC
Confidence 79999999999999999999999999899999999999999999987 78888864 4567888899999999999999
Q ss_pred CCccccCCCCccccccceeeeecccCCCCeeeecccceEeccCCCCCCCCCCCcccCCCCCCCcchHHHHHHhcccccCC
Q psy5568 367 FPTGVSPFSGATTGTGGRIRDVQAVGRGGNCIAGTAGYCVGNLNIPGYKLPWEDEQYGYPNNFATPLNILIEASNGASDY 446 (685)
Q Consensus 367 hPsai~Pf~GAaTG~GG~iRD~~~~GrGa~pia~~~~~~~g~l~ip~~~~pwe~~~~~~p~~~~~~~~i~~~~~~G~s~Y 446 (685)
||||||||+|||||+||+|||+++|||||+|||++++||||+|++|+..+|||+. ..+|.++++|++|+++++.|+++|
T Consensus 78 hPsai~Pf~GAaTGvGG~iRD~~~~g~Ga~piA~~~~~~~g~l~~~~~~~~~e~~-~~~~~~~~~~~~I~~~~~~G~~~y 156 (209)
T d1t3ta4 78 HPTAISPWPGAATGSGGEIRDEGATGRGAKPKAGLVGFSVSNLRIPGFEQPWEED-FGKPERIVTALDIMTEGPLGGAAF 156 (209)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHTSTTCCEEEEEEEEEEESCCCCTTCCCTTCCC-CCCCTTSCCHHHHHHHHHHHHHHH
T ss_pred CCceecCcCCcccccccceEehhhcccccEEEeeeeEEEEecccCcccccccccc-cCCcccccCcceecccccccceec
Confidence 9999999999999999999999999999999999999999999999999999964 789999999999999999999999
Q ss_pred CCC--CCCC
Q psy5568 447 GNI--EPCS 453 (685)
Q Consensus 447 gN~--~Pc~ 453 (685)
||+ +||.
T Consensus 157 gN~~G~P~i 165 (209)
T d1t3ta4 157 NNEFGRPAL 165 (209)
T ss_dssp HHHHTCCEE
T ss_pred cCccCCCCc
Confidence 999 9976
|
| >d1vk3a1 d.79.4.1 (A:2-166) Phosphoribosylformylglycinamidine synthase II, domains 1 and 3 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1t3ta1 a.5.10.1 (A:153-220) FGAM synthase PurL, linker domain {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
| >d1t3ta5 d.79.4.1 (A:617-816) FGAM synthase PurL, PurM-like module, N1 and N2 domains {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
| >d1t3ta3 d.284.1.2 (A:1-152) FGAM synthase PurL, PurS-like domain {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
| >d1vk3a2 d.79.4.1 (A:346-507) Phosphoribosylformylglycinamidine synthase II, domains 1 and 3 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1t3ta7 d.139.1.1 (A:817-1033) FGAM synthase PurL, PurM-like module, C1 and C2 domains {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
| >d1t3ta4 d.79.4.1 (A:221-429) FGAM synthase PurL, PurM-like module, N1 and N2 domains {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
| >d1vk3a3 d.139.1.1 (A:167-345) Phosphoribosylformylglycinamidine synthase II, domains 2 and 4 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1vk3a1 d.79.4.1 (A:2-166) Phosphoribosylformylglycinamidine synthase II, domains 1 and 3 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d2z1ea1 d.79.4.1 (A:43-155) Hydrogenase expression/formation protein HypE {Thermococcus kodakaraensis [TaxId: 311400]} | Back information, alignment and structure |
|---|
| >d2z1ea2 d.139.1.1 (A:156-334) Hydrogenase expression/formation protein HypE {Thermococcus kodakaraensis [TaxId: 311400]} | Back information, alignment and structure |
|---|
| >d2zoda1 d.79.4.1 (A:3-154) Selenide, water dikinase SelD {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
| >d3c9ua1 d.79.4.1 (A:1-137) Thiamine monophosphate kinase (ThiL) N-terminal domain {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
| >d1vk3a2 d.79.4.1 (A:346-507) Phosphoribosylformylglycinamidine synthase II, domains 1 and 3 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1t3ta6 d.139.1.1 (A:430-616) FGAM synthase PurL, PurM-like module, C1 and C2 domains {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
| >d3c9ua2 d.139.1.1 (A:138-300) Thiamine monophosphate kinase (ThiL) C-terminal domain {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
| >d1clia1 d.79.4.1 (A:5-170) Aminoimidazole ribonucleotide synthetase (PurM) N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1vq3a_ d.284.1.1 (A:) PurS subunit of FGAM synthetase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d2zoda2 d.139.1.1 (A:155-336) Selenide, water dikinase SelD {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
| >d1gtda_ d.284.1.1 (A:) PurS subunit of FGAM synthetase {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
| >d1t4aa_ d.284.1.1 (A:) PurS subunit of FGAM synthetase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|