Psyllid ID: psy5613
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 1010 | 2.2.26 [Sep-21-2011] | |||||||
| P46530 | 2437 | Neurogenic locus notch ho | yes | N/A | 0.663 | 0.274 | 0.248 | 2e-16 | |
| Q99466 | 2003 | Neurogenic locus notch ho | yes | N/A | 0.668 | 0.336 | 0.231 | 8e-14 | |
| Q9R172 | 2319 | Neurogenic locus notch ho | yes | N/A | 0.555 | 0.241 | 0.251 | 9e-14 | |
| Q01705 | 2531 | Neurogenic locus notch ho | yes | N/A | 0.612 | 0.244 | 0.246 | 1e-12 | |
| P10079 | 1064 | Fibropellin-1 OS=Strongyl | no | N/A | 0.617 | 0.586 | 0.237 | 9e-12 | |
| P46531 | 2555 | Neurogenic locus notch ho | no | N/A | 0.612 | 0.242 | 0.246 | 1e-11 | |
| Q07008 | 2531 | Neurogenic locus notch ho | no | N/A | 0.744 | 0.297 | 0.244 | 4e-11 | |
| Q9UM47 | 2321 | Neurogenic locus notch ho | no | N/A | 0.390 | 0.169 | 0.254 | 5e-11 | |
| Q61982 | 2318 | Neurogenic locus notch ho | no | N/A | 0.620 | 0.270 | 0.236 | 2e-10 | |
| P21783 | 2524 | Neurogenic locus notch pr | N/A | N/A | 0.387 | 0.154 | 0.258 | 9e-10 |
| >sp|P46530|NOTC1_DANRE Neurogenic locus notch homolog protein 1 OS=Danio rerio GN=notch1a PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 228/917 (24%), Positives = 335/917 (36%), Gaps = 247/917 (26%)
Query: 96 CGEGAICDVV-NHAVMCTCPPGTTGSPFIQCKPIQNEPVYTNPCQPSPCGPNSQCREINH 154
C G IC+ + C CP G+ QC+ + NPC PSPC CR
Sbjct: 29 CQNGGICEYKPSGEASCRCPADFVGA---QCQ-------FPNPCNPSPCRNGGVCR---- 74
Query: 155 QAVCSCLPNYFGSPPGCRPECTVN-SD----CPLDRACQNQKCVDPCPGSCGYRARCQVY 209
P G+ G + +C + SD P++ AC N C + G+C +
Sbjct: 75 -------PQMQGNEVGVKCDCVLGFSDRLCLTPVNHACMNSPCRNG--GTCSL-----LT 120
Query: 210 NHNPVCSCPPGYTGNPFSQCLLPPTPTPTQATPTDPCFPSPCGSNARCRVQNEHALCECL 269
C C PG++G C L DPC +PC + +C H +C C
Sbjct: 121 LDTFTCRCQPGWSG---KTCQL-----------ADPCASNPCANGGQCSAFESHYICTCP 166
Query: 270 PDYYGNPYEGCRPECLINSDCPLSLACIKNHCRDPCPGTCGVQAICSVSNHIPICYCPAG 329
P+++G + CR + ++C +S P P G I V ++ +C CP
Sbjct: 167 PNFHG---QTCRQDV---NECAVS----------PSPCRNGGTCINEVGSY--LCRCPPE 208
Query: 330 FTGDAFRQCSPIPQREPEYRDPCSTTQCGLNAICTVINGAAQ-CACL--LLLQHHIHKNQ 386
+TG P QR PC + C C + C+CL Q H
Sbjct: 209 YTG-------PHCQR---LYQPCLPSPCRSGGTCVQTSDTTHTCSCLPGFTGQTCEHNVD 258
Query: 387 DMDQYI---------SLGYMLCHMDILSSEYIQVYTVQPVIQEDTCNCVPNAECRDGV-- 435
D Q+ + CH D + Y + V D C PNA C++G
Sbjct: 259 DCTQHACENGGPCIDGINTYNCHCD---KHWTGQYCTEDV---DECELSPNA-CQNGGTC 311
Query: 436 --------CVCLPDYYGDGYVSCRPECVQNS----------------DCPRNKACIRNKC 471
CVC+ + GD +C + +CP + +
Sbjct: 312 HNTIGGFHCVCVNGWTGDDCSENIDDCASAACSHGATCHDRVASFFCECPHGRTGLLCHL 371
Query: 472 KNPCVPGTCGEGAICDV--INHAVMCTCPPGTTGSP------------------------ 505
+ C+ C +G+ CD ++ +CTCPPG TGS
Sbjct: 372 DDACISNPCQKGSNCDTNPVSGKAICTCPPGYTGSACNQDIDECSLGANPCEHGGRCLNT 431
Query: 506 --FIQCKPVQNE-----PVYTNPCQPSPCGPNSQCREVHKQAVCSCLPNYFGSPPNCRPE 558
QCK +Q + N C+ +PC ++ C + C C+P Y G
Sbjct: 432 KGSFQCKCLQGYEGPRCEMDVNECKSNPCQNDATCLDQIGGFHCICMPGYEGV------F 485
Query: 559 CTVNSDCPLDKACFNQKCVDP-------CP-GTCGQNANCRV-INHNPSCTCKAGF--TG 607
C +NSD + C N KC+D CP G G + C+V ++ S CK G T
Sbjct: 486 CQINSDDCASQPCLNGKCIDKINSFHCECPKGFSG--SLCQVDVDECASTPCKNGAKCTD 543
Query: 608 DPRVFCSRIPPPPPQESPPEYVNPCIPSPCGPYSQCRDINGSPSCSCLPNYIGAPPNCRP 667
P + P +N C SPC Y CRD S +C C P Y G
Sbjct: 544 GPNKYTCECTPGFSGIHCELDINECASSPC-HYGVCRDGVASFTCDCRPGYTGRL----- 597
Query: 668 ECVQNTECPYDKACINEKCRDPCPGSCGQGAQCRVINHSPVCYCPDGFIG----DAFSSC 723
C N C+++ CR+ G C+ ++ +C CP G G C
Sbjct: 598 -CETNI-----NECLSQPCRN--------GGTCQDRENAYICTCPKGTTGVNCEINIDDC 643
Query: 724 YPKP------IEPIQAPEQQADPCICAP---NAVCRDNV--CVCLPDYYG----DG---Y 765
KP I+ I E C+C P ++C N+ C P + G DG +
Sbjct: 644 KRKPCDYGKCIDKINGYE-----CVCEPGYSGSMCNINIDDCALNPCHNGGTCIDGVNSF 698
Query: 766 TVCRPECVRNSDCANNKACIRNKC-KNPCVPGTCGEGAICDVINHSVVCSCPPGTTGSPF 824
T P+ R++ C + N+C NPC+ G+C D IN S C C G G
Sbjct: 699 TCLCPDGFRDATCLSQ----HNECSSNPCIHGSC-----LDQIN-SYRCVCEAGWMGR-- 746
Query: 825 IQCKPVIQEPVYTNPCQPSPCGPNSQCREVNKQAVCSCLPNYFGSPPNCRPECTVNTDCP 884
C + N C +PC C+++ +C+C + G P C +N +
Sbjct: 747 -NCD------ININECLSNPCVNGGTCKDMTSGYLCTCRAGFSG------PNCQMNINEC 793
Query: 885 LDKACVNQ-KCVDPCPG 900
C+NQ C+D G
Sbjct: 794 ASNPCLNQGSCIDDVAG 810
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Implicated in cell fate specifications during embryo development. May be involved in the formation of the neural plate, notochord and brain vesicles. Danio rerio (taxid: 7955) |
| >sp|Q99466|NOTC4_HUMAN Neurogenic locus notch homolog protein 4 OS=Homo sapiens GN=NOTCH4 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q9R172|NOTC3_RAT Neurogenic locus notch homolog protein 3 OS=Rattus norvegicus GN=Notch3 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q01705|NOTC1_MOUSE Neurogenic locus notch homolog protein 1 OS=Mus musculus GN=Notch1 PE=1 SV=3 | Back alignment and function description |
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| >sp|P10079|FBP1_STRPU Fibropellin-1 OS=Strongylocentrotus purpuratus GN=EGF1 PE=1 SV=2 | Back alignment and function description |
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| >sp|P46531|NOTC1_HUMAN Neurogenic locus notch homolog protein 1 OS=Homo sapiens GN=NOTCH1 PE=1 SV=4 | Back alignment and function description |
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| >sp|Q07008|NOTC1_RAT Neurogenic locus notch homolog protein 1 OS=Rattus norvegicus GN=Notch1 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q9UM47|NOTC3_HUMAN Neurogenic locus notch homolog protein 3 OS=Homo sapiens GN=NOTCH3 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q61982|NOTC3_MOUSE Neurogenic locus notch homolog protein 3 OS=Mus musculus GN=Notch3 PE=1 SV=1 | Back alignment and function description |
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| >sp|P21783|NOTCH_XENLA Neurogenic locus notch protein homolog OS=Xenopus laevis GN=notch1 PE=1 SV=3 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1010 | ||||||
| 170059510 | 6860 | dumpy [Culex quinquefasciatus] gi|167878 | 0.894 | 0.131 | 0.540 | 0.0 | |
| 270013391 | 21117 | hypothetical protein TcasGA2_TC011986 [T | 0.858 | 0.041 | 0.553 | 0.0 | |
| 442625920 | 18014 | dumpy, isoform W [Drosophila melanogaste | 0.862 | 0.048 | 0.521 | 0.0 | |
| 442625928 | 19560 | dumpy, isoform AA [Drosophila melanogast | 0.862 | 0.044 | 0.521 | 0.0 | |
| 442625918 | 20404 | dumpy, isoform V [Drosophila melanogaste | 0.862 | 0.042 | 0.521 | 0.0 | |
| 442625916 | 21657 | dumpy, isoform U [Drosophila melanogaste | 0.862 | 0.040 | 0.521 | 0.0 | |
| 442625914 | 22300 | dumpy, isoform T [Drosophila melanogaste | 0.862 | 0.039 | 0.521 | 0.0 | |
| 157133857 | 5429 | hypothetical protein AaeL_AAEL012905 [Ae | 0.868 | 0.161 | 0.528 | 0.0 | |
| 442625908 | 22949 | dumpy, isoform Q [Drosophila melanogaste | 0.862 | 0.037 | 0.521 | 0.0 | |
| 442625910 | 22830 | dumpy, isoform R [Drosophila melanogaste | 0.862 | 0.038 | 0.521 | 0.0 |
| >gi|170059510|ref|XP_001865394.1| dumpy [Culex quinquefasciatus] gi|167878260|gb|EDS41643.1| dumpy [Culex quinquefasciatus] | Back alignment and taxonomy information |
|---|
Score = 930 bits (2403), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 533/987 (54%), Positives = 657/987 (66%), Gaps = 84/987 (8%)
Query: 34 VQQDTCN---CVPNAVCKDEVCVCLPDFYGDGYVSCRPECVLNSDCPSNKACIRNKCKNP 90
V+ D CN C PNA C + +C CLP++ GD Y CRPECVLNSDCP +KACIR+KC +P
Sbjct: 2595 VRDDPCNPSPCGPNAQCNNGICSCLPEYQGDPYQGCRPECVLNSDCPRDKACIRSKCIDP 2654
Query: 91 CVPGTCGEGAICDVVNHAVMCTCPPGTTGSPFIQCKPIQNEPVYTNPCQPSPCGPNSQCR 150
C PGTCG+ AIC+V+NH MC+CP G G+ F+QC+P Q PV TNPC PSPCGPNSQCR
Sbjct: 2655 C-PGTCGQDAICEVINHIPMCSCPNGMAGNAFVQCRPQQAPPV-TNPCNPSPCGPNSQCR 2712
Query: 151 EINHQAVCSCLPNYFGSPPGCRPECTVNSDCPLDRACQNQKCVDPCPGSCGYRARCQVYN 210
EIN QAVCSC+P + GSPP CRPEC V+S+CP ++AC NQKC DPCPG+CG ARC V N
Sbjct: 2713 EINGQAVCSCVPGFIGSPPTCRPECVVSSECPQNQACNNQKCRDPCPGTCGVGARCSVVN 2772
Query: 211 HNPVCSCPPGYTGNPFSQCLLPPTPTPTQATPTDPCFPSPCGSNA--------------- 255
HNP+CSCP +TG+PF +C P TP Q TP +PC P+PCG NA
Sbjct: 2773 HNPICSCPERFTGDPFVRCQ-PIIETPVQMTPVNPCQPNPCGPNAECRPVAEPVYKNPCQ 2831
Query: 256 --------RCRVQNEHALCECLPDYYGNPYEGCRPECLINSDCPLSLACIKNHCRDPCPG 307
+CR N A+C CLP Y G+P GCRPEC+ +S+CPL AC+ C DPCPG
Sbjct: 2832 PNPCGPNSQCREINGQAVCSCLPTYIGSP-PGCRPECVTSSECPLDRACVNQKCVDPCPG 2890
Query: 308 TCGVQAICSVSNHIPICYCPAGFTGDAFRQCSPIP----QREPEYRDPCSTTQCGLNAIC 363
TCG A C+V+NH PIC C +G+TGD F +C P P + RDPC + CG N+ C
Sbjct: 2891 TCGTNARCNVNNHSPICSCQSGYTGDPFTRCYPNPPPPQDTQVVVRDPCVPSPCGPNSQC 2950
Query: 364 TVINGAAQCACLL-------------LLQHHIHKNQD-MDQYI--------SLGY---ML 398
ING C+CL+ + NQ M++ +G ++
Sbjct: 2951 RNINGVPSCSCLVNYIGSPPNCRPECTINAECPSNQACMNEKCRDPCPGSCGIGARCNVI 3010
Query: 399 CHMDILSSE-----------YIQVYTVQPVIQEDTCN---CVPNAECRDGVCVCLPDYYG 444
H I + E Y + + +++D CN C PNA+C +G+C CLP+Y G
Sbjct: 3011 NHTPICTCESGYTGDPFTNCYPEPPPPREPVRDDPCNPSPCGPNAQCNNGICTCLPEYQG 3070
Query: 445 DGYVSCRPECVQNSDCPRNKACIRNKCKNPCVPGTCGEGAICDVINHAVMCTCPPGTTGS 504
D Y CRPECV NSDCPR+KACIR+KC +PC PGTCG+ AIC+VINH MC+CP G G+
Sbjct: 3071 DPYQGCRPECVLNSDCPRDKACIRSKCIDPC-PGTCGQDAICEVINHIPMCSCPNGMAGN 3129
Query: 505 PFIQCKPVQNEPVYTNPCQPSPCGPNSQCREVHKQAVCSCLPNYFGSPPNCRPECTVNSD 564
F+QC+P Q PV TNPC PSPCGPNSQCRE++ QAVCSC+P + GSPP CRPEC V+S+
Sbjct: 3130 AFVQCRPQQAPPV-TNPCNPSPCGPNSQCREINGQAVCSCVPGFIGSPPTCRPECVVSSE 3188
Query: 565 CPLDKACFNQKCVDPCPGTCGQNANCRVINHNPSCTCKAGFTGDPRVFCSRIPPPPPQES 624
CP ++AC NQKC DPCPGTCG A C V+NHNP C+C FTGDP V C I P Q +
Sbjct: 3189 CPQNQACNNQKCRDPCPGTCGVGARCSVVNHNPICSCPERFTGDPFVRCQPIIETPVQMT 3248
Query: 625 PPEYVNPCIPSPCGPYSQCRDINGSPSCSCLPNYIGAPPNCRPECVQNTECPYDKACINE 684
P VNPC P+PCGP ++CR + SPSC+CL N IG+PPNCRPEC+ N+EC + ACI +
Sbjct: 3249 P---VNPCQPNPCGPNAECRPVGDSPSCTCLDNMIGSPPNCRPECISNSECASNLACIRQ 3305
Query: 685 KCRDPCPGSCGQGAQCRVINHSPVCYCPDGFIGDAFSSCYPKPIEPIQAPEQQADPCICA 744
KC+DPC G+CG A+CRV++H+P+C C GF GD F+ C P + + P P C
Sbjct: 3306 KCQDPCTGACGANAECRVVSHTPMCICSIGFTGDPFTQCLPVQQDVPREPSSPCTPSPCG 3365
Query: 745 PNAVCRD----NVCVCLPDYYGDGYTVCRPECVRNSDCANNKACIRNKCKNPCVPGTCGE 800
NA CR+ C C+ D++G+ Y CRPECV NSDC +N+AC+RNKC++PC PGTCG+
Sbjct: 3366 ANANCREQNGAGSCTCIEDHFGNPYEGCRPECVLNSDCPSNRACVRNKCQDPC-PGTCGQ 3424
Query: 801 GAICDVINHSVVCSCPPGTTGSPFIQCKPVIQEP-VYTNPCQPSPCGPNSQCREVNKQAV 859
A C V+NH C+C PG G PF C +EP Y NPCQP+PCGPNSQCREVN Q V
Sbjct: 3425 NANCQVVNHLPSCTCIPGYEGDPFRFCNIQQREPPAYQNPCQPNPCGPNSQCREVNGQGV 3484
Query: 860 CSCLPNYFGSPPNCRPECTVNTDCPLDKACVNQKCVDPCPGSCGQNANCRVINHSPICTC 919
CSCLP Y GSPP CRPEC +++C LDKACVNQKCVDPCPG+CG NA C V NHSPIC+C
Sbjct: 3485 CSCLPTYIGSPPGCRPECVTSSECSLDKACVNQKCVDPCPGTCGANARCNVNNHSPICSC 3544
Query: 920 RPGFTGEPRIRCSPIPRKLFVPADQAS 946
+ G+TG+P RC P PRK F D S
Sbjct: 3545 QSGYTGDPFTRCYPNPRKTFKFIDDES 3571
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Source: Culex quinquefasciatus Species: Culex quinquefasciatus Genus: Culex Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|270013391|gb|EFA09839.1| hypothetical protein TcasGA2_TC011986 [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
| >gi|442625920|ref|NP_001260038.1| dumpy, isoform W [Drosophila melanogaster] gi|440213323|gb|AGB92574.1| dumpy, isoform W [Drosophila melanogaster] | Back alignment and taxonomy information |
|---|
| >gi|442625928|ref|NP_001260042.1| dumpy, isoform AA [Drosophila melanogaster] gi|440213327|gb|AGB92578.1| dumpy, isoform AA [Drosophila melanogaster] | Back alignment and taxonomy information |
|---|
| >gi|442625918|ref|NP_001260037.1| dumpy, isoform V [Drosophila melanogaster] gi|440213322|gb|AGB92573.1| dumpy, isoform V [Drosophila melanogaster] | Back alignment and taxonomy information |
|---|
| >gi|442625916|ref|NP_001260036.1| dumpy, isoform U [Drosophila melanogaster] gi|440213321|gb|AGB92572.1| dumpy, isoform U [Drosophila melanogaster] | Back alignment and taxonomy information |
|---|
| >gi|442625914|ref|NP_001260035.1| dumpy, isoform T [Drosophila melanogaster] gi|440213320|gb|AGB92571.1| dumpy, isoform T [Drosophila melanogaster] | Back alignment and taxonomy information |
|---|
| >gi|157133857|ref|XP_001663043.1| hypothetical protein AaeL_AAEL012905 [Aedes aegypti] gi|108870667|gb|EAT34892.1| AAEL012905-PA [Aedes aegypti] | Back alignment and taxonomy information |
|---|
| >gi|442625908|ref|NP_001260032.1| dumpy, isoform Q [Drosophila melanogaster] gi|440213317|gb|AGB92568.1| dumpy, isoform Q [Drosophila melanogaster] | Back alignment and taxonomy information |
|---|
| >gi|442625910|ref|NP_001260033.1| dumpy, isoform R [Drosophila melanogaster] gi|440213318|gb|AGB92569.1| dumpy, isoform R [Drosophila melanogaster] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1010 | ||||||
| FB|FBgn0053196 | 22 | dp "dumpy" [Drosophila melanog | 0.858 | 39.40 | 0.437 | 6.3e-215 | |
| MGI|MGI:99460 | 2318 | Notch3 "notch 3" [Mus musculus | 0.811 | 0.353 | 0.257 | 5.2e-36 | |
| ZFIN|ZDB-GENE-041001-184 | 8328 | si:dkey-30j22.1 "si:dkey-30j22 | 0.784 | 0.095 | 0.245 | 5.3e-36 | |
| ZFIN|ZDB-GENE-000329-5 | 2468 | notch3 "notch homolog 3" [Dani | 0.8 | 0.327 | 0.263 | 7.3e-36 | |
| RGD|620761 | 2319 | Notch3 "notch 3" [Rattus norve | 0.811 | 0.353 | 0.261 | 1.8e-35 | |
| UNIPROTKB|Q9R172 | 2319 | Notch3 "Neurogenic locus notch | 0.811 | 0.353 | 0.261 | 1.8e-35 | |
| UNIPROTKB|I3L9D5 | 1175 | NOTCH3 "Uncharacterized protei | 0.799 | 0.686 | 0.256 | 4.6e-35 | |
| UNIPROTKB|E1BGE0 | 1572 | E1BGE0 "Uncharacterized protei | 0.456 | 0.293 | 0.273 | 6.8e-35 | |
| UNIPROTKB|Q04721 | 2471 | NOTCH2 "Neurogenic locus notch | 0.774 | 0.316 | 0.253 | 2.3e-34 | |
| UNIPROTKB|F1NXF9 | 1371 | Gga.18391 "Uncharacterized pro | 0.444 | 0.327 | 0.265 | 2.5e-34 |
| FB|FBgn0053196 dp "dumpy" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 2103 (745.4 bits), Expect = 6.3e-215, P = 6.3e-215
Identities = 416/951 (43%), Positives = 540/951 (56%)
Query: 32 PPVQQDTC----NCVPNAVCKDEVCV--CLPDFYGDGYVSCR-----PECVLNSDCPSN- 79
PP + C C N C ++ CV C P G + CR C+ + +
Sbjct: 13992 PPNCRPECISNSECPTNQACINQKCVDPC-PGLCGQNAI-CRVFSHSAMCLCDGGFTGDP 14049
Query: 80 -KAC--IRN---KCKNPCVPGTCGEGAICDVVNHAVMCTCPPGTTGSPFIQCKPIQNEPV 133
C IR+ + PC P CG A C+ A C C P G+P+ C+P E V
Sbjct: 14050 FSQCSPIRDSPPEVLQPCNPSPCGVNAKCEERGGAGSCQCLPDYFGNPYDGCRP---ECV 14106
Query: 134 YTNPCQPSPCGPNSQCRE-----INHQAVCSCLPNYFGSPPGCRPECTVN--SDCPLD-R 185
+ C + N +CR+ A C + N+ + C T + S C +
Sbjct: 14107 LNSDCPSNQACVNQKCRDPCPGTCGQNAECQVV-NHLATC-NCLVGYTGDPYSICRITVN 14164
Query: 186 ACQNQKCVDPC-PGSCGYRARCQVYNHNPVCSCPPGYTGNPFS---QCLLXXXXXXXXXX 241
+ V+PC P CG ++C+ N VCSC P + G+P + +C
Sbjct: 14165 EPPERVYVNPCQPSPCGPNSQCREVNEQGVCSCLPEFIGSPPACRPECTSSSECAADKAC 14224
Query: 242 XXXXCF---PSPCGSNARCRVQNEHALCECLPDYYGNPYEGCRPECLINSDCPLSLACIK 298
C P+ CG A CRV+N + +C CL + G+P+ C + P ++
Sbjct: 14225 VNRKCVDPCPNVCGQQAECRVRNHNPICTCLSGFTGDPFTRCYRQ-------PPPPPVVE 14277
Query: 299 NHCRDPC-PGTCGVQAICSVSNHIPICYCPAGFTGDAFRQCSPIPQREPEYRDPCSTTQC 357
DPC P CG + C + P C C + G C P E C + Q
Sbjct: 14278 REPLDPCVPSPCGANSQCREIHGTPSCSCLPQYLGTP-PNCRP----ECSINAECPSHQA 14332
Query: 358 GLNAICT-VINGXXXXXXXXXXXHHIHKNQDMDQYISLGYMLCHMDILSSEYIQVYTVQP 416
+N C G +H + YI + +C+ + + E I+ P
Sbjct: 14333 CINQKCRDPCPGSCGLNTQCSVINHTPICSCLAGYIGDPFSVCNPEPIP-EKIR----DP 14387
Query: 417 VIQEDTCN---CVPNAECRDGVCVCLPDYYGDGYVSCRPECVQNSDCPRNKACIRNKCKN 473
+ ED CN C N +C +GVC CLP+Y+GD Y CRPECV ++DC R++AC+R+KC +
Sbjct: 14388 LPPEDPCNPSPCGSNTQCNNGVCSCLPEYHGDPYTGCRPECVLHTDCDRSRACVRHKCVD 14447
Query: 474 PCVPGTCGEGAICDVINHAVMCTCPPGTTGSPFIQCKPVQNEPVYTNPCQPSPCGPNSQC 533
PC PGTCG AIC+V+NH C C G G+ FIQC PV V NPCQPSPCGPNSQC
Sbjct: 14448 PC-PGTCGTNAICEVLNHIPNCRCLEGMQGNAFIQCSPVPKLDVVQNPCQPSPCGPNSQC 14506
Query: 534 REVHKQAVCSCLPNYFGSPPNCRPECTVNSDCPLDKACFNQKCVDPCPGTCGQNANCRVI 593
R V++QA+CSC+ ++ GSPP CRPECT NS+CPL+ AC NQKC DPCPG CG+ A C V
Sbjct: 14507 RVVNQQAICSCITSFIGSPPFCRPECTTNSECPLNLACRNQKCSDPCPGVCGRGAQCHVT 14566
Query: 594 NHNPSCTCKAGFTGDPRVFCSRIXXXXXXXXXXXYVNPCIPSPCGPYSQCRDINGSPSCS 653
NH+P C C +TG+P V C +I C+PSPCGPYSQCR++N SPSC+
Sbjct: 14567 NHSPFCRCLERYTGNPFVSCQQIIEPPVPPPRQT----CLPSPCGPYSQCREVNESPSCT 14622
Query: 654 CLPNYIGAPPNCRPECVQNTECPYDKACINEKCRDPCPGSCGQGAQCRVINHSPVCYCPD 713
CLP YIGAPPNCRPECV ++ECP ++ACI +KCRDPCPG CGQ A+CRV++H+P C CP+
Sbjct: 14623 CLPEYIGAPPNCRPECVTSSECPTNQACIQQKCRDPCPGLCGQSAECRVLSHTPSCVCPE 14682
Query: 714 GFIGDAFSSCYPKPIEPIQAPEQQADPCI---CAPNAVC--RDNV--CVCLPDYYGDGYT 766
G GD F+ C K I+ + Q DPC C NA C R + C CLPDY+G+ Y
Sbjct: 14683 GMEGDPFTLCKEKRIQELD----QLDPCSPSPCGINARCTSRQDAGSCQCLPDYFGNPYE 14738
Query: 767 VCRPECVRNSDCANNKACIRNKCKNPCVPGTCGEGAICDVINHSVVCSCPPGTTGSPFIQ 826
CRPECV NSDC +NKAC + KC++PC PGTCG+ A+C+V+NH CSC G +G P+
Sbjct: 14739 GCRPECVLNSDCPSNKACQQQKCQDPC-PGTCGQNALCNVLNHIPSCSCISGYSGDPYRS 14797
Query: 827 CKPVIQEPV--YTNPCQPSPCGPNSQCREVNKQAVCSCLPNYFGSPPNCRPECTVNTDCP 884
C P EPV Y NPCQPSPCGPNSQCREVN+QA+CSCLP Y G+PP CRPECT++++CP
Sbjct: 14798 CVP---EPVKEYVNPCQPSPCGPNSQCREVNEQAICSCLPEYVGAPPVCRPECTISSECP 14854
Query: 885 LDKACVNQKCVDPCPGSCGQNANCRVINHSPICTCRPGFTGEPRIRCSPIP 935
DKACVNQKCVDPCP +CG A CRV+NHSPIC+CR G+TG+ RC P P
Sbjct: 14855 ADKACVNQKCVDPCPNTCGDQAICRVVNHSPICSCRAGYTGDAFFRCFPKP 14905
|
|
| MGI|MGI:99460 Notch3 "notch 3" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-041001-184 si:dkey-30j22.1 "si:dkey-30j22.1" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-000329-5 notch3 "notch homolog 3" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| RGD|620761 Notch3 "notch 3" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q9R172 Notch3 "Neurogenic locus notch homolog protein 3" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|I3L9D5 NOTCH3 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E1BGE0 E1BGE0 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q04721 NOTCH2 "Neurogenic locus notch homolog protein 2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1NXF9 Gga.18391 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
No hit with e-value below 0.005
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1010 | |||
| KOG4289|consensus | 2531 | 99.81 | ||
| KOG4289|consensus | 2531 | 99.68 | ||
| KOG1217|consensus | 487 | 99.63 | ||
| KOG1217|consensus | 487 | 99.63 | ||
| KOG1214|consensus | 1289 | 99.61 | ||
| KOG1214|consensus | 1289 | 99.53 | ||
| KOG0994|consensus | 1758 | 99.53 | ||
| KOG1219|consensus | 4289 | 99.31 | ||
| KOG1219|consensus | 4289 | 99.24 | ||
| KOG1225|consensus | 525 | 99.18 | ||
| KOG0994|consensus | 1758 | 99.08 | ||
| KOG1225|consensus | 525 | 99.03 | ||
| KOG4260|consensus | 350 | 98.6 | ||
| KOG1836|consensus | 1705 | 98.56 | ||
| KOG1836|consensus | 1705 | 98.54 | ||
| KOG4260|consensus | 350 | 98.47 | ||
| KOG1226|consensus | 783 | 98.06 | ||
| KOG1226|consensus | 783 | 97.89 | ||
| PF00008 | 32 | EGF: EGF-like domain This is a sub-family of the P | 97.74 | |
| PF07645 | 42 | EGF_CA: Calcium-binding EGF domain; InterPro: IPR0 | 97.63 | |
| PF07645 | 42 | EGF_CA: Calcium-binding EGF domain; InterPro: IPR0 | 97.62 | |
| PF00008 | 32 | EGF: EGF-like domain This is a sub-family of the P | 97.6 | |
| smart00179 | 39 | EGF_CA Calcium-binding EGF-like domain. | 97.51 | |
| smart00179 | 39 | EGF_CA Calcium-binding EGF-like domain. | 97.31 | |
| PF06247 | 197 | Plasmod_Pvs28: Plasmodium ookinete surface protein | 97.28 | |
| cd00054 | 38 | EGF_CA Calcium-binding EGF-like domain, present in | 97.08 | |
| PF12947 | 36 | EGF_3: EGF domain; InterPro: IPR024731 This entry | 96.89 | |
| PF12947 | 36 | EGF_3: EGF domain; InterPro: IPR024731 This entry | 96.83 | |
| PF06247 | 197 | Plasmod_Pvs28: Plasmodium ookinete surface protein | 96.83 | |
| cd00054 | 38 | EGF_CA Calcium-binding EGF-like domain, present in | 96.82 | |
| cd00053 | 36 | EGF Epidermal growth factor domain, found in epide | 96.34 | |
| cd00053 | 36 | EGF Epidermal growth factor domain, found in epide | 96.28 | |
| smart00181 | 35 | EGF Epidermal growth factor-like domain. | 96.21 | |
| smart00181 | 35 | EGF Epidermal growth factor-like domain. | 96.11 | |
| KOG1218|consensus | 316 | 96.07 | ||
| PF07974 | 32 | EGF_2: EGF-like domain; InterPro: IPR013111 A sequ | 95.43 | |
| KOG1218|consensus | 316 | 95.16 | ||
| PF07974 | 32 | EGF_2: EGF-like domain; InterPro: IPR013111 A sequ | 94.8 | |
| PF12662 | 24 | cEGF: Complement Clr-like EGF-like | 94.23 | |
| PF12662 | 24 | cEGF: Complement Clr-like EGF-like | 94.14 | |
| PF12661 | 13 | hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E | 92.85 | |
| PF12661 | 13 | hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E | 92.79 | |
| smart00051 | 63 | DSL delta serrate ligand. | 90.87 | |
| PF14670 | 36 | FXa_inhibition: Coagulation Factor Xa inhibitory s | 90.1 | |
| PF12946 | 37 | EGF_MSP1_1: MSP1 EGF domain 1; InterPro: IPR024730 | 88.78 | |
| PF14670 | 36 | FXa_inhibition: Coagulation Factor Xa inhibitory s | 87.76 | |
| smart00051 | 63 | DSL delta serrate ligand. | 83.43 | |
| PF12946 | 37 | EGF_MSP1_1: MSP1 EGF domain 1; InterPro: IPR024730 | 82.41 | |
| PF00053 | 49 | Laminin_EGF: Laminin EGF-like (Domains III and V); | 81.97 |
| >KOG4289|consensus | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.5e-19 Score=209.59 Aligned_cols=112 Identities=31% Similarity=0.774 Sum_probs=89.7
Q ss_pred CCCCCCCCCCCCeee----------------------ecCCceeeeCCCCCccCCCCCcccCCCCCCCCCCCCCCCCCCC
Q psy5613 89 NPCVPGTCGEGAICD----------------------VVNHAVMCTCPPGTTGSPFIQCKPIQNEPVYTNPCQPSPCGPN 146 (1010)
Q Consensus 89 ~~C~~~~C~~~~~C~----------------------~~~g~~~C~C~~G~~g~~~~~C~~~~~~~~~~d~C~~~~C~~~ 146 (1010)
+.|...||.|...|+ +..++++|+|||||+|+. |+ ..+|+|.+.||+++
T Consensus 1180 niClrEPCenymkCvsvlrFdssapf~~s~s~lfRpi~pvnglrCrCPpGFTgd~---Ce------TeiDlCYs~pC~nn 1250 (2531)
T KOG4289|consen 1180 NICLREPCENYMKCVSVLRFDSSAPFLASDSVLFRPIHPVNGLRCRCPPGFTGDY---CE------TEIDLCYSGPCGNN 1250 (2531)
T ss_pred chhhcchhHHHHhhhhheeecccCccccccceeeeeccccCceeEeCCCCCCccc---cc------chhHhhhcCCCCCC
Confidence 345556777777772 344789999999999998 98 67899999999999
Q ss_pred CcceecCCCeeeecCCCCcCCCCCCCCCCccCCCCCCCCcccCCcccCCCCCCCCCCceEeec-CCCccccCCCC-CccC
Q psy5613 147 SQCREINHQAVCSCLPNYFGSPPGCRPECTVNSDCPLDRACQNQKCVDPCPGSCGYRARCQVY-NHNPVCSCPPG-YTGN 224 (1010)
Q Consensus 147 g~C~~~~g~~~C~C~~G~~g~~~~C~~~C~~~~~C~~~~~C~~~~C~~~C~~~C~~~~~C~~~-~g~~~C~C~~G-y~g~ 224 (1010)
|+|....|+|+|+|.+||+|. .||.... ...|. |+.|.++++|++. .|.|.|.|+.| |++.
T Consensus 1251 g~C~srEggYtCeCrpg~tGe------hCEvs~~---agrCv--------pGvC~nggtC~~~~nggf~c~Cp~ge~e~p 1313 (2531)
T KOG4289|consen 1251 GRCRSREGGYTCECRPGFTGE------HCEVSAR---AGRCV--------PGVCKNGGTCVNLLNGGFCCHCPYGEFEDP 1313 (2531)
T ss_pred CceEEecCceeEEecCCcccc------ceeeecc---cCccc--------cceecCCCEEeecCCCceeccCCCcccCCC
Confidence 999999999999999999999 8886532 12334 4578889999995 47899999998 4455
Q ss_pred CC
Q psy5613 225 PF 226 (1010)
Q Consensus 225 ~c 226 (1010)
.|
T Consensus 1314 rC 1315 (2531)
T KOG4289|consen 1314 RC 1315 (2531)
T ss_pred ce
Confidence 54
|
|
| >KOG4289|consensus | Back alignment and domain information |
|---|
| >KOG1217|consensus | Back alignment and domain information |
|---|
| >KOG1217|consensus | Back alignment and domain information |
|---|
| >KOG1214|consensus | Back alignment and domain information |
|---|
| >KOG1214|consensus | Back alignment and domain information |
|---|
| >KOG0994|consensus | Back alignment and domain information |
|---|
| >KOG1219|consensus | Back alignment and domain information |
|---|
| >KOG1219|consensus | Back alignment and domain information |
|---|
| >KOG1225|consensus | Back alignment and domain information |
|---|
| >KOG0994|consensus | Back alignment and domain information |
|---|
| >KOG1225|consensus | Back alignment and domain information |
|---|
| >KOG4260|consensus | Back alignment and domain information |
|---|
| >KOG1836|consensus | Back alignment and domain information |
|---|
| >KOG1836|consensus | Back alignment and domain information |
|---|
| >KOG4260|consensus | Back alignment and domain information |
|---|
| >KOG1226|consensus | Back alignment and domain information |
|---|
| >KOG1226|consensus | Back alignment and domain information |
|---|
| >PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins | Back alignment and domain information |
|---|
| >PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins | Back alignment and domain information |
|---|
| >PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins | Back alignment and domain information |
|---|
| >PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins | Back alignment and domain information |
|---|
| >smart00179 EGF_CA Calcium-binding EGF-like domain | Back alignment and domain information |
|---|
| >smart00179 EGF_CA Calcium-binding EGF-like domain | Back alignment and domain information |
|---|
| >PF06247 Plasmod_Pvs28: Plasmodium ookinete surface protein Pvs28; InterPro: IPR010423 This family consists of several ookinete surface protein (Pvs28) from several species of Plasmodium | Back alignment and domain information |
|---|
| >cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins | Back alignment and domain information |
|---|
| >PF12947 EGF_3: EGF domain; InterPro: IPR024731 This entry represents an EGF domain found in the the C terminus of malarial parasite merozoite surface protein 1 [], as well as other proteins | Back alignment and domain information |
|---|
| >PF12947 EGF_3: EGF domain; InterPro: IPR024731 This entry represents an EGF domain found in the the C terminus of malarial parasite merozoite surface protein 1 [], as well as other proteins | Back alignment and domain information |
|---|
| >PF06247 Plasmod_Pvs28: Plasmodium ookinete surface protein Pvs28; InterPro: IPR010423 This family consists of several ookinete surface protein (Pvs28) from several species of Plasmodium | Back alignment and domain information |
|---|
| >cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins | Back alignment and domain information |
|---|
| >cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium | Back alignment and domain information |
|---|
| >cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium | Back alignment and domain information |
|---|
| >smart00181 EGF Epidermal growth factor-like domain | Back alignment and domain information |
|---|
| >smart00181 EGF Epidermal growth factor-like domain | Back alignment and domain information |
|---|
| >KOG1218|consensus | Back alignment and domain information |
|---|
| >PF07974 EGF_2: EGF-like domain; InterPro: IPR013111 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins | Back alignment and domain information |
|---|
| >KOG1218|consensus | Back alignment and domain information |
|---|
| >PF07974 EGF_2: EGF-like domain; InterPro: IPR013111 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins | Back alignment and domain information |
|---|
| >PF12662 cEGF: Complement Clr-like EGF-like | Back alignment and domain information |
|---|
| >PF12662 cEGF: Complement Clr-like EGF-like | Back alignment and domain information |
|---|
| >PF12661 hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E26_A 3A7Q_A 2YGP_A 2YGO_A 1HRE_A 1HAE_A 1HAF_A 1HRF_A | Back alignment and domain information |
|---|
| >PF12661 hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E26_A 3A7Q_A 2YGP_A 2YGO_A 1HRE_A 1HAE_A 1HAF_A 1HRF_A | Back alignment and domain information |
|---|
| >smart00051 DSL delta serrate ligand | Back alignment and domain information |
|---|
| >PF14670 FXa_inhibition: Coagulation Factor Xa inhibitory site; PDB: 3Q3K_B 1NFY_B 1LQD_A 1G2L_B 1IQF_L 2UWP_B 2VH6_B 3KQC_L 2P93_L 2BQW_A | Back alignment and domain information |
|---|
| >PF12946 EGF_MSP1_1: MSP1 EGF domain 1; InterPro: IPR024730 This EGF-like domain is found at the C terminus of the malaria parasite MSP1 protein | Back alignment and domain information |
|---|
| >PF14670 FXa_inhibition: Coagulation Factor Xa inhibitory site; PDB: 3Q3K_B 1NFY_B 1LQD_A 1G2L_B 1IQF_L 2UWP_B 2VH6_B 3KQC_L 2P93_L 2BQW_A | Back alignment and domain information |
|---|
| >smart00051 DSL delta serrate ligand | Back alignment and domain information |
|---|
| >PF12946 EGF_MSP1_1: MSP1 EGF domain 1; InterPro: IPR024730 This EGF-like domain is found at the C terminus of the malaria parasite MSP1 protein | Back alignment and domain information |
|---|
| >PF00053 Laminin_EGF: Laminin EGF-like (Domains III and V); InterPro: IPR002049 Laminins [] are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B* Length = 687 | Back alignment and structure |
|---|
Score = 54.3 bits (130), Expect = 2e-07
Identities = 48/323 (14%), Positives = 66/323 (20%), Gaps = 45/323 (13%)
Query: 518 YTNPCQPSPCGPNSQCREVHKQAVCSCLPNYFGSPPNCRPECTVNSDCPL---DKACFNQ 574
Y + C N + + + + L D
Sbjct: 360 YDSFCSNGVTHRNQPRGDCDGVQINVPITFQVKVTATECIQEQSFVIRALGFTDIVTVQV 419
Query: 575 KCVDPCPGTCGQNANCRVINHNP----SCTCKAGFTGDPRVFCSRIPPPPPQESPPEYVN 630
C C C G+ G C
Sbjct: 420 LPQCECRCRDQSRDRSLCHGKGFLECGICRCDTGYIGK---NCE--------------CQ 462
Query: 631 PCIPSPCGPYSQCRDINGSPSCSCLPNYIGAPPNCRPECVQNTECPYDKACINEKCRDPC 690
S CR N S CS L + + C + Y + C +
Sbjct: 463 TQGRSSQELEGSCRKDNNSIICSGLGDCVCGQCLCHTSD-VPGKLIYGQYCECDTINCER 521
Query: 691 PGSCGQGAQCRVINHSPVCYCPDGFIGDAFSSCYPKPIEPIQAPEQQADPCICAPNAVCR 750
G R + C C GF G A E C+ CR
Sbjct: 522 YNGQVCGGPGRGLCFCGKCRCHPGFEGSACQ------CERTTEGCLNPRRVECSGRGRCR 575
Query: 751 DNVCVCLPDYYGDG---YTVCRPECVRNSDCANNKACIRN--------KCKNPCVPGTCG 799
NVC C Y C C + CA + C +
Sbjct: 576 CNVCECHSGYQLPLCQECPGCPSPCGKYISCAECLKFEKGPFGKNCSAACPGLQLSNNPV 635
Query: 800 EGAICDVINHSVVCSCPPGTTGS 822
+G C + C T
Sbjct: 636 KGRTCKERD---SEGCWVAYTLE 655
|
| >3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B* Length = 687 | Back alignment and structure |
|---|
| >3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B* Length = 687 | Back alignment and structure |
|---|
| >3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B* Length = 687 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L* Length = 195 | Back alignment and structure |
|---|
| >1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L* Length = 195 | Back alignment and structure |
|---|
| >1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L* Length = 195 | Back alignment and structure |
|---|
| >1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L* Length = 195 | Back alignment and structure |
|---|
| >1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A* Length = 634 | Back alignment and structure |
|---|
| >1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A* Length = 634 | Back alignment and structure |
|---|
| >1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A* Length = 634 | Back alignment and structure |
|---|
| >1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A Length = 162 | Back alignment and structure |
|---|
| >2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E Length = 897 | Back alignment and structure |
|---|
| >3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 3ije_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B* Length = 690 | Back alignment and structure |
|---|
| >3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 3ije_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B* Length = 690 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1010 | |||
| 4fbr_A | 267 | Lectin, myxobacterial hemagglutinin; beta-barrel, | 99.85 | |
| 4fbr_A | 267 | Lectin, myxobacterial hemagglutinin; beta-barrel, | 99.84 | |
| 2vj3_A | 135 | Neurogenic locus notch homolog protein 1; transcri | 99.79 | |
| 1z1y_A | 186 | Ookinete surface protein PVS25; four EGF-like doma | 99.79 | |
| 1z1y_A | 186 | Ookinete surface protein PVS25; four EGF-like doma | 99.78 | |
| 2vj3_A | 135 | Neurogenic locus notch homolog protein 1; transcri | 99.77 | |
| 2ygq_A | 324 | WIF-1, WNT inhibitory factor 1; signaling protein, | 99.72 | |
| 2ygq_A | 324 | WIF-1, WNT inhibitory factor 1; signaling protein, | 99.71 | |
| 4d90_A | 143 | EGF-like repeat and discoidin I-like domain-conta | 99.69 | |
| 2vj2_A | 169 | Jagged-1; signalling, polymorphism, glycoprotein, | 99.69 | |
| 4d90_A | 143 | EGF-like repeat and discoidin I-like domain-conta | 99.68 | |
| 2vj2_A | 169 | Jagged-1; signalling, polymorphism, glycoprotein, | 99.61 | |
| 3fcs_B | 690 | Integrin beta-3; beta propeller, rossmann fold, EG | 99.59 | |
| 3fcs_B | 690 | Integrin beta-3; beta propeller, rossmann fold, EG | 99.58 | |
| 1yo8_A | 634 | Thrombospondin-2; EGF, Ca(2+)-binding domains, lec | 99.58 | |
| 1yo8_A | 634 | Thrombospondin-2; EGF, Ca(2+)-binding domains, lec | 99.58 | |
| 1uzk_A | 162 | Fibrillin-1; glycoprotein, extra-cellular matrix, | 99.57 | |
| 2bou_A | 143 | EGF-like module containing mucin-like hormone rece | 99.57 | |
| 1uzk_A | 162 | Fibrillin-1; glycoprotein, extra-cellular matrix, | 99.53 | |
| 2bou_A | 143 | EGF-like module containing mucin-like hormone rece | 99.51 | |
| 1dx5_I | 118 | Thrombomodulin; serine proteinase, EGF-like domain | 99.45 | |
| 1dx5_I | 118 | Thrombomodulin; serine proteinase, EGF-like domain | 99.42 | |
| 2w86_A | 147 | Fibrillin-1, fibrillin1; phosphoprotein, EGF-like | 99.39 | |
| 2w86_A | 147 | Fibrillin-1, fibrillin1; phosphoprotein, EGF-like | 99.38 | |
| 2gy5_A | 423 | Angiopoietin-1 receptor; ligand-binding domain, tr | 99.34 | |
| 3k6s_B | 687 | Integrin beta-2; cell receptor, adhesion molecule, | 99.34 | |
| 2gy5_A | 423 | Angiopoietin-1 receptor; ligand-binding domain, tr | 99.3 | |
| 1tpg_A | 91 | T-plasminogen activator F1-G; plasminogen activati | 99.28 | |
| 3k6s_B | 687 | Integrin beta-2; cell receptor, adhesion molecule, | 99.28 | |
| 1tpg_A | 91 | T-plasminogen activator F1-G; plasminogen activati | 99.27 | |
| 4aqs_A | 525 | Laminin subunit beta-1; cell adhesion; HET: NAG BM | 99.15 | |
| 1aut_L | 114 | Activated protein C; serine proteinase, plasma cal | 99.1 | |
| 1emn_A | 82 | Fibrillin; extracellular matrix, calcium-binding, | 99.1 | |
| 1emn_A | 82 | Fibrillin; extracellular matrix, calcium-binding, | 99.09 | |
| 1lmj_A | 86 | Fibrillin 1; EGF, calcium, microfibril, neonatal, | 99.04 | |
| 4aqs_A | 525 | Laminin subunit beta-1; cell adhesion; HET: NAG BM | 99.03 | |
| 1lmj_A | 86 | Fibrillin 1; EGF, calcium, microfibril, neonatal, | 99.02 | |
| 1x7a_L | 146 | Coagulation factor IX, light chain; inhibition, bl | 99.01 | |
| 1aut_L | 114 | Activated protein C; serine proteinase, plasma cal | 99.0 | |
| 1nfu_B | 195 | Coagulation factor XA, light chain; hydrolase; HET | 98.96 | |
| 1z6c_A | 87 | Vitamin K-dependent protein S; EGF module, blood c | 98.96 | |
| 2vh0_B | 134 | Activated factor XA light chain; serine protease, | 98.93 | |
| 1x7a_L | 146 | Coagulation factor IX, light chain; inhibition, bl | 98.93 | |
| 2c4f_L | 142 | Coagulation factor VII precursor; blood coagulatio | 98.92 | |
| 2c4f_L | 142 | Coagulation factor VII precursor; blood coagulatio | 98.89 | |
| 1n7d_A | 699 | LDL receptor, low-density lipoprotein receptor; fa | 98.88 | |
| 1z6c_A | 87 | Vitamin K-dependent protein S; EGF module, blood c | 98.86 | |
| 1nfu_B | 195 | Coagulation factor XA, light chain; hydrolase; HET | 98.83 | |
| 2vh0_B | 134 | Activated factor XA light chain; serine protease, | 98.78 | |
| 2w2n_E | 107 | LDL receptor, low-density lipoprotein receptor; hy | 98.77 | |
| 2w2n_E | 107 | LDL receptor, low-density lipoprotein receptor; hy | 98.77 | |
| 1klo_A | 162 | Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: | 98.71 | |
| 3h5c_B | 317 | Vitamin K-dependent protein Z; protein Z-protein Z | 98.7 | |
| 3h5c_B | 317 | Vitamin K-dependent protein Z; protein Z-protein Z | 98.69 | |
| 1n7d_A | 699 | LDL receptor, low-density lipoprotein receptor; fa | 98.67 | |
| 2p28_B | 217 | Integrin beta-2; hybrid domain, PSI domain, I-EGF | 98.61 | |
| 3m0c_C | 791 | LDL receptor, low-density lipoprotein receptor; pr | 98.57 | |
| 1klo_A | 162 | Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: | 98.54 | |
| 3m0c_C | 791 | LDL receptor, low-density lipoprotein receptor; pr | 98.46 | |
| 2p28_B | 217 | Integrin beta-2; hybrid domain, PSI domain, I-EGF | 98.45 | |
| 1edm_B | 39 | Factor IX; epidermal growth factor, EGF, calcium- | 98.36 | |
| 3u7u_G | 55 | Neuregulin 1; signaling protein, transferase-trans | 98.34 | |
| 3u7u_G | 55 | Neuregulin 1; signaling protein, transferase-trans | 98.24 | |
| 1edm_B | 39 | Factor IX; epidermal growth factor, EGF, calcium- | 98.21 | |
| 3p5b_L | 400 | Low density lipoprotein receptor variant; B-propel | 98.2 | |
| 3p5b_L | 400 | Low density lipoprotein receptor variant; B-propel | 98.09 | |
| 3v65_B | 386 | Low-density lipoprotein receptor-related protein; | 98.02 | |
| 1egf_A | 53 | Epidermal growth factor; NMR {Mus musculus} SCOP: | 97.98 | |
| 3v65_B | 386 | Low-density lipoprotein receptor-related protein; | 97.92 | |
| 1a3p_A | 45 | Epidermal growth factor; disulfide connectivities, | 97.92 | |
| 2k2s_B | 61 | Micronemal protein 6; microneme protein complex, c | 97.81 | |
| 1a3p_A | 45 | Epidermal growth factor; disulfide connectivities, | 97.78 | |
| 2k2s_B | 61 | Micronemal protein 6; microneme protein complex, c | 97.75 | |
| 1hae_A | 63 | Heregulin-alpha; growth factor; NMR {Homo sapiens} | 97.74 | |
| 1egf_A | 53 | Epidermal growth factor; NMR {Mus musculus} SCOP: | 97.74 | |
| 1k36_A | 46 | Epiregulin; EGF-like fold, hormone/growth factor c | 97.68 | |
| 1hae_A | 63 | Heregulin-alpha; growth factor; NMR {Homo sapiens} | 97.68 | |
| 2wg3_C | 463 | Hedgehog-interacting protein; lipoprotein, develop | 97.55 | |
| 1k36_A | 46 | Epiregulin; EGF-like fold, hormone/growth factor c | 97.54 | |
| 3zyj_B | 426 | Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA | 97.51 | |
| 3zyj_B | 426 | Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA | 97.45 | |
| 2wg3_C | 463 | Hedgehog-interacting protein; lipoprotein, develop | 97.44 | |
| 3ca7_A | 52 | Protein spitz; argos, EGF, developmental protein, | 97.25 | |
| 3ca7_A | 52 | Protein spitz; argos, EGF, developmental protein, | 97.17 | |
| 1nql_B | 53 | Epidermal growth factor; cell surface receptor, ty | 96.87 | |
| 2kl7_A | 71 | Fibulin-4; secreted, calcium, disease mutation, di | 96.81 | |
| 1apq_A | 53 | Complement protease C1R; EGF, calcium binding, ser | 96.79 | |
| 1nql_B | 53 | Epidermal growth factor; cell surface receptor, ty | 96.78 | |
| 1apq_A | 53 | Complement protease C1R; EGF, calcium binding, ser | 96.64 | |
| 1gl4_A | 285 | Nidogen-1, entactin; immunoglobulin-like domain, e | 96.57 | |
| 2jkh_L | 55 | Factor X light chain; plasma, calcium, zymogen, se | 96.44 | |
| 2kl7_A | 71 | Fibulin-4; secreted, calcium, disease mutation, di | 96.42 | |
| 2fd6_A | 122 | Urokinase-type plasminogen activator; UPAR, ATF, A | 96.33 | |
| 1ob1_C | 99 | Major merozoite surface protein; immune system, im | 96.17 | |
| 1kli_L | 69 | Factor VIIA; extrinsic coagulation pathway, serine | 96.07 | |
| 1g1s_A | 162 | P-selectin; selectin, lectin, EGF, sulphated, SLEX | 96.01 | |
| 1ob1_C | 99 | Major merozoite surface protein; immune system, im | 95.93 | |
| 2fd6_A | 122 | Urokinase-type plasminogen activator; UPAR, ATF, A | 95.87 | |
| 1g1s_A | 162 | P-selectin; selectin, lectin, EGF, sulphated, SLEX | 95.74 | |
| 3ltf_D | 58 | Protein spitz; receptor-ligand complex ectodomain | 95.54 | |
| 1gl4_A | 285 | Nidogen-1, entactin; immunoglobulin-like domain, e | 95.37 | |
| 1n1i_A | 105 | Merozoite surface protein-1; MSP1, malaria, surfac | 95.25 | |
| 2jkh_L | 55 | Factor X light chain; plasma, calcium, zymogen, se | 95.2 | |
| 3ltf_D | 58 | Protein spitz; receptor-ligand complex ectodomain | 95.19 | |
| 1kli_L | 69 | Factor VIIA; extrinsic coagulation pathway, serine | 94.76 | |
| 1n1i_A | 105 | Merozoite surface protein-1; MSP1, malaria, surfac | 94.62 | |
| 1kig_L | 51 | Factor XA; glycoprotein, serine protease, plasma, | 94.54 | |
| 1q4g_A | 553 | Prostaglandin G/H synthase 1; cyclooxygenase, non- | 94.48 | |
| 1q4g_A | 553 | Prostaglandin G/H synthase 1; cyclooxygenase, non- | 94.16 | |
| 3nt1_A | 587 | Prostaglandin-endoperoxide synthase 2; prostagland | 94.11 | |
| 3nt1_A | 587 | Prostaglandin-endoperoxide synthase 2; prostagland | 93.91 | |
| 2bz6_L | 53 | Blood coagulation factor VIIA; serine protease, en | 93.04 | |
| 1kig_L | 51 | Factor XA; glycoprotein, serine protease, plasma, | 92.43 | |
| 3cfw_A | 164 | L-selectin; EGF, cell adhesion, EGF-like domain, g | 92.35 | |
| 1g1t_A | 157 | E-selectin; EGF, adhesion molecule, SLEX, immune s | 92.1 | |
| 3cfw_A | 164 | L-selectin; EGF, cell adhesion, EGF-like domain, g | 91.77 | |
| 1szb_A | 170 | Mannose binding lectin-associated serine protease- | 91.6 | |
| 1xdt_R | 79 | Hbegf, heparin-binding epidermal growth factor; co | 91.14 | |
| 3e50_C | 50 | Protransforming growth factor alpha; IDE, TGF-alph | 91.01 | |
| 1xdt_R | 79 | Hbegf, heparin-binding epidermal growth factor; co | 90.83 | |
| 2i9a_A | 145 | Urokinase-type plasminogen activator; growth facto | 90.78 | |
| 2i9a_A | 145 | Urokinase-type plasminogen activator; growth facto | 90.53 | |
| 1iox_A | 50 | Betacellulin; EGF-like fold, hormone/growth factor | 90.5 | |
| 2rnl_A | 50 | Amphiregulin; AR, colorectum cell-derived growth f | 90.45 | |
| 1oig_A | 26 | Dumpy, CG33196-PB; structural protein; NMR {Drosop | 90.43 | |
| 3e50_C | 50 | Protransforming growth factor alpha; IDE, TGF-alph | 89.81 | |
| 2bz6_L | 53 | Blood coagulation factor VIIA; serine protease, en | 89.23 | |
| 1iox_A | 50 | Betacellulin; EGF-like fold, hormone/growth factor | 89.23 | |
| 1g1t_A | 157 | E-selectin; EGF, adhesion molecule, SLEX, immune s | 89.03 | |
| 2rnl_A | 50 | Amphiregulin; AR, colorectum cell-derived growth f | 88.89 | |
| 1szb_A | 170 | Mannose binding lectin-associated serine protease- | 88.84 | |
| 2y38_A | 403 | Laminin subunit alpha-5; structural protein, cell | 87.98 | |
| 2ygo_A | 188 | WIF-1, WNT inhibitory factor 1; signaling protein, | 87.72 | |
| 2ygo_A | 188 | WIF-1, WNT inhibitory factor 1; signaling protein, | 87.71 | |
| 4aqt_A | 375 | Laminin subunit gamma-1; cell adhesion; HET: NAG B | 87.27 | |
| 2wph_E | 59 | Coagulation factor IXA light chain; serine proteas | 86.01 | |
| 4aqt_A | 375 | Laminin subunit gamma-1; cell adhesion; HET: NAG B | 85.99 | |
| 3asi_A | 410 | Neurexin-1-alpha; beta-sandwich, cell adhesion, sy | 85.23 | |
| 2y38_A | 403 | Laminin subunit alpha-5; structural protein, cell | 84.21 | |
| 3asi_A | 410 | Neurexin-1-alpha; beta-sandwich, cell adhesion, sy | 83.51 | |
| 2wph_E | 59 | Coagulation factor IXA light chain; serine proteas | 81.8 | |
| 2p26_A | 280 | Integrin beta-2; hybrid domain, PSI domain, I-EGF | 81.32 | |
| 2p26_A | 280 | Integrin beta-2; hybrid domain, PSI domain, I-EGF | 81.1 |
| >4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=3.5e-25 Score=232.03 Aligned_cols=252 Identities=11% Similarity=-0.023 Sum_probs=177.8
Q ss_pred cccccCCCeeeecCCC---ccCCCCCCcCCCccCCCCCCCccccCCcccCCCCCCCCCCceeeccCCCceeecCCCCccC
Q psy5613 532 QCREVHKQAVCSCLPN---YFGSPPNCRPECTVNSDCPLDKACFNQKCVDPCPGTCGQNANCRVINHNPSCTCKAGFTGD 608 (1010)
Q Consensus 532 ~C~~~~g~~~C~C~~G---~~G~~~~C~~~C~~~~~C~~~~~C~~~~C~~~C~~~C~~~~~C~~~~~~~~C~C~~Gy~G~ 608 (1010)
++.+..|+|++.+.+| |+|. +++. +. ..+...|.++++|++..++|+|.|++||+|.
T Consensus 5 ~~~n~~Gg~s~~~~pgg~~~~g~--~~~~----n~--------------~~~~~~c~ngG~C~~g~~~y~C~Cp~Gf~G~ 64 (267)
T 4fbr_A 5 LVQNQWGGSQATWNPGGLWLIGA--RDKQ----NV--------------VALDIKSDDGGKTLKGTMTYNGEGPIGFRGT 64 (267)
T ss_dssp EEEEECSSTTSCCEEEEEEECCC--CSSC----CE--------------EEEEEECSSTTSEEEEEEEETTSCCEEEEEE
T ss_pred eEeecCCcccCCcCCCCceeecc--cccc----cc--------------ccCCCCcCCCCeecCCCCCeEEeCCCCcccc
Confidence 3557788999999988 4454 3321 11 1112367889999999999999999999999
Q ss_pred CccccccCCCCCCCCCCCCCCCC------CCCCCCCCCCccccCCCCceeeCCCCcccCCCCCccCCcCCCCCCCCcccc
Q psy5613 609 PRVFCSRIPPPPPQESPPEYVNP------CIPSPCGPYSQCRDINGSPSCSCLPNYIGAPPNCRPECVQNTECPYDKACI 682 (1010)
Q Consensus 609 ~~~~C~~~~~~~~~~~~~~~id~------C~~~~C~~~g~C~~~~g~y~C~C~~G~~g~~~~C~~~C~~~~~C~~~~~C~ 682 (1010)
. |+ ++|++ |.+.||+++++| |.|. +|+ ..++|.
T Consensus 65 ~---Ce------------~ni~ec~~~~~c~s~pC~nggtc--------------~~G~--~c~----~~~eC~------ 103 (267)
T 4fbr_A 65 L---SS------------ANNYTVENQWGGTSAPWQPGGVW--------------VLGA--RDK----QNIVAV------ 103 (267)
T ss_dssp E---CS------------TTEEEEEEESSSTTSCEEEEEEE--------------ECCC--CSS----CCEEEE------
T ss_pred c---cc------------ccccccccccCcCCCcccCCCee--------------eccC--ccc----cccccC------
Confidence 6 87 68888 666677776654 3455 443 333443
Q ss_pred CCccCCCCCCCCCCCCeeeeeCCcceeeCCCCCccCCCccCCCCCCCCCCCCCCCCCCCCCCCCCcccCceeecCCCccC
Q psy5613 683 NEKCRDPCPGSCGQGAQCRVINHSPVCYCPDGFIGDAFSSCYPKPIEPIQAPEQQADPCICAPNAVCRDNVCVCLPDYYG 762 (1010)
Q Consensus 683 ~~~C~~~C~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~C~~~~~~~~~~~~c~~~~c~C~~~g~C~~~~C~C~~G~~G 762 (1010)
+.+|.++++|++...+|+|+|++||+|..|+ +++++|...+ +.+.+.|.+ +..+|.|
T Consensus 104 --------s~pC~ngG~C~~~~~sy~C~C~~Gf~G~~Ce---------~~~d~C~n~~--~c~s~pC~n----gg~c~~G 160 (267)
T 4fbr_A 104 --------SIKSNDGGKTLTGTTTYNGEGPIGFKSEVTD---------GDTYSVENQW--GGSAAPWHS----GGVWVLG 160 (267)
T ss_dssp --------EEECSSTTSEEEEEEEETTSCCEEEEEEECC---------CCEEEEEEEC--SSTTSCCEE----EEEEECC
T ss_pred --------CCCCCCCCEEecCCccEEeeCCCCccccCCC---------CCcccccccC--CcCCccccC----Ccceecc
Confidence 3478999999999999999999999999998 4666644333 222222322 1112456
Q ss_pred CCCcccCCCCCCCCCCCCCcccccCCccCCCCCCCCCCCCeeeecCCeeeeeCCCCCccCCCccccCCccCCCCCCCCCC
Q psy5613 763 DGYTVCRPECVRNSDCANNKACIRNKCKNPCVPGTCGEGAICDVINHSVVCSCPPGTTGSPFIQCKPVIQEPVYTNPCQP 842 (1010)
Q Consensus 763 ~~c~~~~~~C~~~~~C~~~~~C~~~~C~~~C~~~~C~~~~~C~~~~g~y~C~C~~G~~G~~~~~C~~~~~~~~~~~~C~~ 842 (1010)
..++..++ |.+.+|.++++|++..++|+|.|++||+|. +|+..+ ++|..
T Consensus 161 ~~c~~~i~----------------------c~~~~c~ngg~C~dg~~~y~C~Cp~Gf~G~---~c~~~i------~ec~~ 209 (267)
T 4fbr_A 161 TRGKQNVI----------------------NVDAKSNDGGKTLSGTMTYNGEGPIGFRGT---LTSPDT------YTVEN 209 (267)
T ss_dssp SSTTSCEE----------------------EEEEECSSTTSEEEEEEEETTSCCEEEEEE---EEETTE------EEEEE
T ss_pred cccccccc----------------------cCCCCCCCCCEeeCCCCCeEEeCCCCcccc---cccccc------ceecc
Confidence 66654321 115678999999999999999999999999 598754 66544
Q ss_pred CCCCCCCceeecCCceeeecCCCCcCCCCCCCCCCccCCCCCCcccccCCcccCCCCCCCCCCCeeeecCCCceeeCCCC
Q psy5613 843 SPCGPNSQCREVNKQAVCSCLPNYFGSPPNCRPECTVNTDCPLDKACVNQKCVDPCPGSCGQNANCRVINHSPICTCRPG 922 (1010)
Q Consensus 843 ~~C~~~~~C~~~~g~~~C~C~~G~~g~~~~C~~~C~~~~~C~~~~~C~~~~C~~~C~~~C~~~~~C~~~~g~~~C~C~~G 922 (1010)
.++...+.|.+. |.|.+.|..|+... .|+ .+|.++|+|++.+.+|+|.||+|
T Consensus 210 ~~~c~~~~c~~g-G~~~~~C~~g~n~~------~c~---------------------~~c~ngGtC~dg~~sy~CeCp~G 261 (267)
T 4fbr_A 210 QWGGSTAPWNPG-GFWMIGARNGQNVV------ALN---------------------VASSDGGKTLAGTMIYNGEGPIG 261 (267)
T ss_dssp ECSCTTSCCEEE-EEEECCCCTTCCEE------EEE---------------------EECSSTTSEEEEEEEETTSCCEE
T ss_pred CCCccCCcccCC-CeEEEecCCCCccc------cCC---------------------cCCCCCCEeeCCCcceeecCCCC
Confidence 433344555554 45667788888766 222 25778999999999999999999
Q ss_pred CcCC
Q psy5613 923 FTGE 926 (1010)
Q Consensus 923 ~~G~ 926 (1010)
|+|.
T Consensus 262 F~G~ 265 (267)
T 4fbr_A 262 FRAR 265 (267)
T ss_dssp EEEE
T ss_pred cccc
Confidence 9985
|
| >4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A* | Back alignment and structure |
|---|
| >2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A* | Back alignment and structure |
|---|
| >1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A | Back alignment and structure |
|---|
| >1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A | Back alignment and structure |
|---|
| >2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A* | Back alignment and structure |
|---|
| >2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens} | Back alignment and structure |
|---|
| >2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens} | Back alignment and structure |
|---|
| >4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
| >2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A | Back alignment and structure |
|---|
| >4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
| >2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A | Back alignment and structure |
|---|
| >3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B* | Back alignment and structure |
|---|
| >3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B* | Back alignment and structure |
|---|
| >1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A* | Back alignment and structure |
|---|
| >1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A* | Back alignment and structure |
|---|
| >1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A | Back alignment and structure |
|---|
| >2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A | Back alignment and structure |
|---|
| >1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A | Back alignment and structure |
|---|
| >2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A | Back alignment and structure |
|---|
| >1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A | Back alignment and structure |
|---|
| >1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A | Back alignment and structure |
|---|
| >2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
| >2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
| >2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B* | Back alignment and structure |
|---|
| >3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B* | Back alignment and structure |
|---|
| >2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B* | Back alignment and structure |
|---|
| >1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A | Back alignment and structure |
|---|
| >3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B* | Back alignment and structure |
|---|
| >1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A | Back alignment and structure |
|---|
| >4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus} | Back alignment and structure |
|---|
| >1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L* | Back alignment and structure |
|---|
| >1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A | Back alignment and structure |
|---|
| >1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A | Back alignment and structure |
|---|
| >1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 | Back alignment and structure |
|---|
| >4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus} | Back alignment and structure |
|---|
| >1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 | Back alignment and structure |
|---|
| >1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L* | Back alignment and structure |
|---|
| >1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L* | Back alignment and structure |
|---|
| >1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L* | Back alignment and structure |
|---|
| >1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ... | Back alignment and structure |
|---|
| >1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L* | Back alignment and structure |
|---|
| >2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ... | Back alignment and structure |
|---|
| >2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ... | Back alignment and structure |
|---|
| >1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A | Back alignment and structure |
|---|
| >1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L* | Back alignment and structure |
|---|
| >2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ... | Back alignment and structure |
|---|
| >2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A | Back alignment and structure |
|---|
| >2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A | Back alignment and structure |
|---|
| >1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A | Back alignment and structure |
|---|
| >3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens} | Back alignment and structure |
|---|
| >3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens} | Back alignment and structure |
|---|
| >1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A | Back alignment and structure |
|---|
| >2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A | Back alignment and structure |
|---|
| >3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} | Back alignment and structure |
|---|
| >1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A | Back alignment and structure |
|---|
| >3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} | Back alignment and structure |
|---|
| >2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A | Back alignment and structure |
|---|
| >1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A | Back alignment and structure |
|---|
| >3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens} | Back alignment and structure |
|---|
| >3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens} | Back alignment and structure |
|---|
| >1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A | Back alignment and structure |
|---|
| >3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L | Back alignment and structure |
|---|
| >3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L | Back alignment and structure |
|---|
| >3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} | Back alignment and structure |
|---|
| >1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A | Back alignment and structure |
|---|
| >3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} | Back alignment and structure |
|---|
| >1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1 | Back alignment and structure |
|---|
| >2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A | Back alignment and structure |
|---|
| >1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1 | Back alignment and structure |
|---|
| >2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A | Back alignment and structure |
|---|
| >1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A | Back alignment and structure |
|---|
| >1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A | Back alignment and structure |
|---|
| >1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A | Back alignment and structure |
|---|
| >1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A | Back alignment and structure |
|---|
| >2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A | Back alignment and structure |
|---|
| >1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A | Back alignment and structure |
|---|
| >3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} | Back alignment and structure |
|---|
| >3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} | Back alignment and structure |
|---|
| >2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A | Back alignment and structure |
|---|
| >3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D | Back alignment and structure |
|---|
| >3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D | Back alignment and structure |
|---|
| >1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C* | Back alignment and structure |
|---|
| >2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1 | Back alignment and structure |
|---|
| >1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C* | Back alignment and structure |
|---|
| >1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1 | Back alignment and structure |
|---|
| >1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A | Back alignment and structure |
|---|
| >2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ... | Back alignment and structure |
|---|
| >2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A | Back alignment and structure |
|---|
| >1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A | Back alignment and structure |
|---|
| >1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L* | Back alignment and structure |
|---|
| >1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A | Back alignment and structure |
|---|
| >1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A | Back alignment and structure |
|---|
| >2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A | Back alignment and structure |
|---|
| >1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A | Back alignment and structure |
|---|
| >3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster} | Back alignment and structure |
|---|
| >1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A | Back alignment and structure |
|---|
| >1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4 | Back alignment and structure |
|---|
| >2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ... | Back alignment and structure |
|---|
| >3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster} | Back alignment and structure |
|---|
| >1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L* | Back alignment and structure |
|---|
| >1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4 | Back alignment and structure |
|---|
| >1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1 | Back alignment and structure |
|---|
| >1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ... | Back alignment and structure |
|---|
| >1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ... | Back alignment and structure |
|---|
| >3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ... | Back alignment and structure |
|---|
| >3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ... | Back alignment and structure |
|---|
| >2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L* | Back alignment and structure |
|---|
| >1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1 | Back alignment and structure |
|---|
| >3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
| >1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A | Back alignment and structure |
|---|
| >1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1 | Back alignment and structure |
|---|
| >1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1 | Back alignment and structure |
|---|
| >3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A | Back alignment and structure |
|---|
| >1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1 | Back alignment and structure |
|---|
| >2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A* | Back alignment and structure |
|---|
| >2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A* | Back alignment and structure |
|---|
| >1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A | Back alignment and structure |
|---|
| >2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A | Back alignment and structure |
|---|
| >2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L* | Back alignment and structure |
|---|
| >1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A | Back alignment and structure |
|---|
| >1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A | Back alignment and structure |
|---|
| >2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1 | Back alignment and structure |
|---|
| >2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus} | Back alignment and structure |
|---|
| >2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A* | Back alignment and structure |
|---|
| >2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A* | Back alignment and structure |
|---|
| >4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus} | Back alignment and structure |
|---|
| >2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B* | Back alignment and structure |
|---|
| >4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus} | Back alignment and structure |
|---|
| >3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus} | Back alignment and structure |
|---|
| >2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus} | Back alignment and structure |
|---|
| >3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus} | Back alignment and structure |
|---|
| >2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B* | Back alignment and structure |
|---|
| >2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A* | Back alignment and structure |
|---|
| >2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1010 | |||
| d1edmb_ | 39 | Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606 | 98.66 | |
| d2vj3a1 | 42 | Neurogenic locus notch homolog protein 1, Notch1 { | 98.63 | |
| d2c4fl1 | 37 | Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]} | 98.6 | |
| d2vj3a2 | 39 | Neurogenic locus notch homolog protein 1, Notch1 { | 98.59 | |
| d1edmb_ | 39 | Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606 | 98.56 | |
| d2vj3a2 | 39 | Neurogenic locus notch homolog protein 1, Notch1 { | 98.53 | |
| d2vj3a1 | 42 | Neurogenic locus notch homolog protein 1, Notch1 { | 98.46 | |
| d2c4fl1 | 37 | Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]} | 98.45 | |
| d2vj3a3 | 35 | Neurogenic locus notch homolog protein 1, Notch1 { | 98.42 | |
| d1xkba1 | 39 | Factor X, N-terminal module {Human (Homo sapiens) | 98.41 | |
| d2vj3a3 | 35 | Neurogenic locus notch homolog protein 1, Notch1 { | 98.41 | |
| d1xkba1 | 39 | Factor X, N-terminal module {Human (Homo sapiens) | 98.36 | |
| d1emoa1 | 43 | Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} | 98.28 | |
| d1g1ta2 | 39 | E-selectin, EGF-domain {Human (Homo sapiens) [TaxI | 98.25 | |
| d1autl1 | 48 | Activated protein c (autoprothrombin IIa) {Human ( | 98.13 | |
| d1g1ta2 | 39 | E-selectin, EGF-domain {Human (Homo sapiens) [TaxI | 98.12 | |
| d1tpga1 | 41 | Plasminogen activator (tissue-type), t-PA {Human ( | 98.11 | |
| d1g1sa2 | 40 | E-selectin, EGF-domain {Human (Homo sapiens) [TaxI | 98.11 | |
| d1g1sa2 | 40 | E-selectin, EGF-domain {Human (Homo sapiens) [TaxI | 98.1 | |
| d1emoa1 | 43 | Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} | 98.08 | |
| d1tpga1 | 41 | Plasminogen activator (tissue-type), t-PA {Human ( | 98.05 | |
| d1q4ga2 | 42 | Prostaglandin H2 synthase-1, EGF-like module {Shee | 98.01 | |
| d1q4ga2 | 42 | Prostaglandin H2 synthase-1, EGF-like module {Shee | 97.94 | |
| d1autl1 | 48 | Activated protein c (autoprothrombin IIa) {Human ( | 97.93 | |
| d1cvua2 | 41 | Prostaglandin H2 synthase-1, EGF-like module {Mous | 97.88 | |
| d1cvua2 | 41 | Prostaglandin H2 synthase-1, EGF-like module {Mous | 97.87 | |
| d1lmja1 | 44 | Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} | 97.81 | |
| d1lmja1 | 44 | Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} | 97.77 | |
| d1uzka1 | 43 | Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} | 97.67 | |
| d1uzka1 | 43 | Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} | 97.64 | |
| d1lmja2 | 42 | Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} | 97.62 | |
| d1haea_ | 63 | Heregulin-alpha, EGF-like domain {Human (Homo sapi | 97.53 | |
| d1lmja2 | 42 | Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} | 97.49 | |
| d1gl4a2 | 40 | EGF-like domain of nidogen-1 {Mouse (Mus musculus) | 97.49 | |
| d1haea_ | 63 | Heregulin-alpha, EGF-like domain {Human (Homo sapi | 97.41 | |
| d1dx5i3 | 40 | Thrombomodulin, different EGF-like domains {Human | 97.4 | |
| d1uzka2 | 43 | Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} | 97.35 | |
| d1uzka2 | 43 | Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} | 97.34 | |
| d1apqa_ | 53 | Complement protease C1R {Human (Homo sapiens) [Tax | 97.32 | |
| d1dx5i3 | 40 | Thrombomodulin, different EGF-like domains {Human | 97.29 | |
| d1gl4a2 | 40 | EGF-like domain of nidogen-1 {Mouse (Mus musculus) | 97.28 | |
| d1apqa_ | 53 | Complement protease C1R {Human (Homo sapiens) [Tax | 97.23 | |
| d3egfa_ | 53 | Epidermal growth factor, EGF {Mouse (Mus musculus) | 97.17 | |
| d1i0ua2 | 41 | Low density lipoprotein (LDL) receptor, different | 97.14 | |
| d1nt0a3 | 45 | Mannose-binding protein associated serine protease | 97.08 | |
| d3egfa_ | 53 | Epidermal growth factor, EGF {Mouse (Mus musculus) | 97.01 | |
| d1szba2 | 45 | Mannose-binding protein associated serine protease | 96.99 | |
| d1i0ua2 | 41 | Low density lipoprotein (LDL) receptor, different | 96.98 | |
| d1nqlb_ | 48 | Epidermal growth factor, EGF {Human (Homo sapiens) | 96.95 | |
| d1nqlb_ | 48 | Epidermal growth factor, EGF {Human (Homo sapiens) | 96.94 | |
| d1nt0a3 | 45 | Mannose-binding protein associated serine protease | 96.58 | |
| d1szba2 | 45 | Mannose-binding protein associated serine protease | 96.58 | |
| d3bpse1 | 40 | Low density lipoprotein (LDL) receptor, different | 96.48 | |
| d1emoa2 | 39 | Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} | 96.44 | |
| d1emoa2 | 39 | Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} | 96.26 | |
| d1nzia2 | 42 | Complement C1S component {Human (Homo sapiens) [Ta | 96.14 | |
| d1nzia2 | 42 | Complement C1S component {Human (Homo sapiens) [Ta | 95.8 | |
| d3bpse1 | 40 | Low density lipoprotein (LDL) receptor, different | 95.61 | |
| d2i9aa1 | 40 | Plasminogen activator (urokinase-type) {Human (Hom | 95.57 | |
| d2i9aa1 | 40 | Plasminogen activator (urokinase-type) {Human (Hom | 95.01 | |
| d1k36a_ | 46 | Epiregulin, EGF-domain {Human (Homo sapiens) [TaxI | 94.6 | |
| d1k36a_ | 46 | Epiregulin, EGF-domain {Human (Homo sapiens) [TaxI | 94.24 | |
| d1l3ya_ | 41 | Integrin beta EGF-like domains {Human (Homo sapien | 93.64 | |
| d1ioxa_ | 50 | Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606] | 93.53 | |
| d1ioxa_ | 50 | Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606] | 92.79 | |
| d1moxc_ | 49 | Transforming growth factor alpha {Human (Homo sapi | 92.71 | |
| d1jv2b4 | 31 | Integrin beta EGF-like domains {Human (Homo sapien | 92.52 | |
| d1l3ya_ | 41 | Integrin beta EGF-like domains {Human (Homo sapien | 92.23 | |
| d1moxc_ | 49 | Transforming growth factor alpha {Human (Homo sapi | 91.66 | |
| d1jv2b4 | 31 | Integrin beta EGF-like domains {Human (Homo sapien | 91.21 | |
| d1autl2 | 50 | Activated protein c (autoprothrombin IIa) {Human ( | 90.64 | |
| d1kigl_ | 51 | Factor X, N-terminal module {Cow (Bos taurus) [Tax | 90.17 | |
| d2p3ua1 | 51 | Factor X, N-terminal module {Human (Homo sapiens) | 88.65 | |
| d1xdtr_ | 41 | Heparin-binding epidermal growth factor, HBEGF {Hu | 88.12 | |
| d1jv2b5 | 43 | Integrin beta EGF-like domains {Human (Homo sapien | 87.36 | |
| d2p3ua1 | 51 | Factor X, N-terminal module {Human (Homo sapiens) | 86.14 | |
| d1jv2b5 | 43 | Integrin beta EGF-like domains {Human (Homo sapien | 85.98 | |
| d1kigl_ | 51 | Factor X, N-terminal module {Cow (Bos taurus) [Tax | 85.5 | |
| d1xdtr_ | 41 | Heparin-binding epidermal growth factor, HBEGF {Hu | 85.48 | |
| d1autl2 | 50 | Activated protein c (autoprothrombin IIa) {Human ( | 84.9 | |
| d1oiga_ | 26 | Dumpy {Fruit fly (Drosophila melanogaster) [TaxId: | 82.97 |
| >d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Small proteins fold: Knottins (small inhibitors, toxins, lectins) superfamily: EGF/Laminin family: EGF-type module domain: Factor IX (IXa) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.66 E-value=8.6e-09 Score=72.79 Aligned_cols=38 Identities=24% Similarity=0.507 Sum_probs=36.0
Q ss_pred CCCCCCCCCCCCCCCeecccCCceeeeeCCCCccCCCC
Q psy5613 241 TPTDPCFPSPCGSNARCRVQNEHALCECLPDYYGNPYE 278 (1010)
Q Consensus 241 ~~~d~C~~~~C~~~~~C~~~~g~~~C~C~~Gf~G~~c~ 278 (1010)
+|+|+|+++||.++|+|++..++|+|.|++||+|+.|+
T Consensus 1 id~d~C~~~PC~ngg~C~~~~~~y~C~C~~g~~G~~Ce 38 (39)
T d1edmb_ 1 VDGDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCE 38 (39)
T ss_dssp CCCCTTTTCCCCTTCEEEEETTEEEEECCTTCCSTTSC
T ss_pred CccccCCCCCCCCCcEEEcCCCCEEEECCCCCCCCCCC
Confidence 37899999999999999999999999999999999876
|
| >d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
| >d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
| >d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
| >d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
| >d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2i9aa1 g.3.11.1 (A:10-49) Plasminogen activator (urokinase-type) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2i9aa1 g.3.11.1 (A:10-49) Plasminogen activator (urokinase-type) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1l3ya_ g.3.11.6 (A:) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1moxc_ g.3.11.1 (C:) Transforming growth factor alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1jv2b4 g.3.11.6 (B:532-562) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1l3ya_ g.3.11.6 (A:) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1moxc_ g.3.11.1 (C:) Transforming growth factor alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1jv2b4 g.3.11.6 (B:532-562) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
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| >d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1xdtr_ g.3.11.1 (R:) Heparin-binding epidermal growth factor, HBEGF {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1jv2b5 g.3.11.6 (B:563-605) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1jv2b5 g.3.11.6 (B:563-605) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
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| >d1xdtr_ g.3.11.1 (R:) Heparin-binding epidermal growth factor, HBEGF {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1oiga_ g.3.18.1 (A:) Dumpy {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
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