Psyllid ID: psy5614

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------10
Protein Sequence
MSWLMWIQCSMQSNPSCSCLPNYIGAPPNCRPECVMNSECASNLACINEKCRDPCPGSCGYNAQCKVINHTPICTCPEGYIGDPFSSCFPKPPERKCE
Secondary Structure (PSIPRED)
ccccEEEEEccccccEEEcccccccccccccccccccccccccccccccccccccccccccccEEEEEccccEEEccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccEEEEEEEEcccccEEEcccccccccccccccEEEcccccccHHHHHccccccccccccccEEEEEEccccEEEccccccccccccccccccccccc
Coil and Loop (DISEMBL)
MSWLMWIQCsmqsnpscsclpnyigappncrpecvmnsecasnlacinekcrdpcpgscgynaqckvinhtpictcpegyigdpfsscfpkpperkce
Flexible Loop (DISEMBL)
MSWLMWIQCSMQSNPSCSCLPNYIGAPPNCRPECVMNSECASNLACINEKCRDPCPGSCGYNAQCKVINHTPICTCPEGYIGDPFSscfpkpperkce
Low Complexity Region (SEG)
MSWLMWIQCSMQSNPSCSCLPNYIGAPPNCRPECVMNSECASNLACINEKCRDPCPGSCGYNAQCKVINHTPICTCPEGYIGDPFSSCFPKPPERKCE
Disordered region (IsUnstruct)
**WLMWIQCSMQSNPSCSCLPNYIGAPPNCRPECVMNSECASNLACINEKCRDPCPGSCGYNAQCKVINHTPICTCPEGYIGDPFSSC**********
Disordered Region (DISOPRED)
*SWLMWIQCSMQSNPSCSCLPNYIGAPPNCRPECVMNSECASNLACINEKCRDPCPGSCGYNAQCKVINHTPICTCPEGYIGDPFSSCFP*P******
Disordered Region (DISEMBL)
MSWLMWIQCSMQSNPSCSCLPNYIGAPPNCRPECVMNSECASNLACINEKCRDPCPGSCGYNAQCKVINHTPICTCPEGYIGDPFSSCF*********
Disordered Region (DISPRO)
*SWLMWIQCSMQSNPSCSCLPNYIGAPPNCRPECVMNSECASNLACINEKCRDPCPGSCGYNAQCKVINHTPICTCPEGYIGDPFSSCFPKP******
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSWLMWIQCSMQSNPSCSCLPNYIGAPPNCRPECVMNSECASNLACINEKCRDPCPGSCGYNAQCKVINHTPICTCPEGYIGDPFSSCFPKPPERKCE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	98
270013391	21117	hypothetical protein TcasGA2_TC011986 [T	0.877	0.004	0.781	1e-31
195433142	3792	GK23922 [Drosophila willistoni] gi|19416	0.897	0.023	0.719	1e-28
158299050	2257	AGAP010023-PA [Anopheles gambiae str. PE	0.826	0.035	0.75	2e-28
442625920	18014	dumpy, isoform W [Drosophila melanogaste	0.846	0.004	0.690	3e-28
442625928	19560	dumpy, isoform AA [Drosophila melanogast	0.846	0.004	0.690	3e-28
195052558	7303	GH13743 [Drosophila grimshawi] gi|193900	0.846	0.011	0.738	4e-28
442625918	20404	dumpy, isoform V [Drosophila melanogaste	0.846	0.004	0.690	4e-28
442625916	21657	dumpy, isoform U [Drosophila melanogaste	0.846	0.003	0.690	4e-28
442625914	22300	dumpy, isoform T [Drosophila melanogaste	0.846	0.003	0.690	4e-28
442625910	22830	dumpy, isoform R [Drosophila melanogaste	0.846	0.003	0.690	5e-28

>gi|270013391|gb|EFA09839.1| hypothetical protein TcasGA2_TC011986 [Tribolium castaneum]

 Score =  140 bits (353), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 68/87 (78%), Positives = 75/87 (86%)

Query: 10    SMQSNPSCSCLPNYIGAPPNCRPECVMNSECASNLACINEKCRDPCPGSCGYNAQCKVIN 69
             ++  +PSCSCLPNY+G+PPNC+PEC +NSECASNLACI EKCRDPCPGSCG  AQC VIN
Sbjct: 14661 NINGSPSCSCLPNYVGSPPNCKPECTINSECASNLACIREKCRDPCPGSCGSGAQCSVIN 14720

Query: 70    HTPICTCPEGYIGDPFSSCFPKPPERK 96
             HTPICTCPEGY GDPFS C PKP E K
Sbjct: 14721 HTPICTCPEGYTGDPFSYCQPKPQEVK 14747

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195433142|ref|XP_002064574.1| GK23922 [Drosophila willistoni] gi|194160659|gb|EDW75560.1| GK23922 [Drosophila willistoni]

 Score =  130 bits (327), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 64/89 (71%), Positives = 72/89 (80%), Gaps = 1/89 (1%)

Query: 6    WIQC-SMQSNPSCSCLPNYIGAPPNCRPECVMNSECASNLACINEKCRDPCPGSCGYNAQ 64
            + QC  +    SCSCLPNYIGA PNCRPEC +N+EC SNLACINEKCRDPCPG+CG+ A 
Sbjct: 1074 YSQCRQVNGGASCSCLPNYIGAAPNCRPECTINAECPSNLACINEKCRDPCPGACGFAAT 1133

Query: 65   CKVINHTPICTCPEGYIGDPFSSCFPKPP 93
            C VINHTP C+CP GY GDPFSSC P+PP
Sbjct: 1134 CNVINHTPSCSCPVGYTGDPFSSCRPQPP 1162

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158299050|ref|XP_001689174.1| AGAP010023-PA [Anopheles gambiae str. PEST] gi|157014182|gb|EDO63447.1| AGAP010023-PA [Anopheles gambiae str. PEST]

 Score =  129 bits (325), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 63/84 (75%), Positives = 71/84 (84%)

Query: 10   SMQSNPSCSCLPNYIGAPPNCRPECVMNSECASNLACINEKCRDPCPGSCGYNAQCKVIN 69
             +  +PSCSCL NYIG+PPNCRPEC +N+EC SN AC+NEKCRDPCPGSCG NA+C VIN
Sbjct: 2173 DVNGSPSCSCLINYIGSPPNCRPECTINAECPSNQACMNEKCRDPCPGSCGINARCNVIN 2232

Query: 70   HTPICTCPEGYIGDPFSSCFPKPP 93
            HTPICTC EGY GDPF+SC P PP
Sbjct: 2233 HTPICTCEEGYTGDPFTSCRPMPP 2256

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|442625920|ref|NP_001260038.1| dumpy, isoform W [Drosophila melanogaster] gi|440213323|gb|AGB92574.1| dumpy, isoform W [Drosophila melanogaster]

 Score =  129 bits (323), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 58/84 (69%), Positives = 71/84 (84%)

Query: 10    SMQSNPSCSCLPNYIGAPPNCRPECVMNSECASNLACINEKCRDPCPGSCGYNAQCKVIN 69
             ++Q  PSC+CLP+++GAPPNCRPEC +++EC SNLACI E+C DPCPGSCGY A+C V+N
Sbjct: 12744 NVQGVPSCTCLPDFLGAPPNCRPECTISAECPSNLACIRERCIDPCPGSCGYAAECSVVN 12803

Query: 70    HTPICTCPEGYIGDPFSSCFPKPP 93
             HTPIC CP G+ GDPFSSC P PP
Sbjct: 12804 HTPICVCPAGFTGDPFSSCRPAPP 12827

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|442625928|ref|NP_001260042.1| dumpy, isoform AA [Drosophila melanogaster] gi|440213327|gb|AGB92578.1| dumpy, isoform AA [Drosophila melanogaster]

 Score =  129 bits (323), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 58/84 (69%), Positives = 71/84 (84%)

Query: 10    SMQSNPSCSCLPNYIGAPPNCRPECVMNSECASNLACINEKCRDPCPGSCGYNAQCKVIN 69
             ++Q  PSC+CLP+++GAPPNCRPEC +++EC SNLACI E+C DPCPGSCGY A+C V+N
Sbjct: 11732 NVQGVPSCTCLPDFLGAPPNCRPECTISAECPSNLACIRERCIDPCPGSCGYAAECSVVN 11791

Query: 70    HTPICTCPEGYIGDPFSSCFPKPP 93
             HTPIC CP G+ GDPFSSC P PP
Sbjct: 11792 HTPICVCPAGFTGDPFSSCRPAPP 11815

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195052558|ref|XP_001993322.1| GH13743 [Drosophila grimshawi] gi|193900381|gb|EDV99247.1| GH13743 [Drosophila grimshawi]

 Score =  128 bits (322), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 62/84 (73%), Positives = 70/84 (83%), Gaps = 1/84 (1%)

Query: 6    WIQC-SMQSNPSCSCLPNYIGAPPNCRPECVMNSECASNLACINEKCRDPCPGSCGYNAQ 64
            + QC  +    SCSCLPNYIGA PNCRPEC +N+ECASNLACINEKCRDPCPG+CG+ AQ
Sbjct: 4578 YSQCREVNGGASCSCLPNYIGAAPNCRPECTINAECASNLACINEKCRDPCPGACGFAAQ 4637

Query: 65   CKVINHTPICTCPEGYIGDPFSSC 88
            C VINHTP C+CP GY GDPF+SC
Sbjct: 4638 CNVINHTPSCSCPTGYTGDPFTSC 4661

Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|442625918|ref|NP_001260037.1| dumpy, isoform V [Drosophila melanogaster] gi|440213322|gb|AGB92573.1| dumpy, isoform V [Drosophila melanogaster]

 Score =  128 bits (322), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 58/84 (69%), Positives = 71/84 (84%)

Query: 10    SMQSNPSCSCLPNYIGAPPNCRPECVMNSECASNLACINEKCRDPCPGSCGYNAQCKVIN 69
             ++Q  PSC+CLP+++GAPPNCRPEC +++EC SNLACI E+C DPCPGSCGY A+C V+N
Sbjct: 10479 NVQGVPSCTCLPDFLGAPPNCRPECTISAECPSNLACIRERCIDPCPGSCGYAAECSVVN 10538

Query: 70    HTPICTCPEGYIGDPFSSCFPKPP 93
             HTPIC CP G+ GDPFSSC P PP
Sbjct: 10539 HTPICVCPAGFTGDPFSSCRPAPP 10562

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|442625916|ref|NP_001260036.1| dumpy, isoform U [Drosophila melanogaster] gi|440213321|gb|AGB92572.1| dumpy, isoform U [Drosophila melanogaster]

 Score =  128 bits (322), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 58/84 (69%), Positives = 71/84 (84%)

Query: 10    SMQSNPSCSCLPNYIGAPPNCRPECVMNSECASNLACINEKCRDPCPGSCGYNAQCKVIN 69
             ++Q  PSC+CLP+++GAPPNCRPEC +++EC SNLACI E+C DPCPGSCGY A+C V+N
Sbjct: 11732 NVQGVPSCTCLPDFLGAPPNCRPECTISAECPSNLACIRERCIDPCPGSCGYAAECSVVN 11791

Query: 70    HTPICTCPEGYIGDPFSSCFPKPP 93
             HTPIC CP G+ GDPFSSC P PP
Sbjct: 11792 HTPICVCPAGFTGDPFSSCRPAPP 11815

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|442625914|ref|NP_001260035.1| dumpy, isoform T [Drosophila melanogaster] gi|440213320|gb|AGB92571.1| dumpy, isoform T [Drosophila melanogaster]

 Score =  128 bits (322), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 58/84 (69%), Positives = 71/84 (84%)

Query: 10    SMQSNPSCSCLPNYIGAPPNCRPECVMNSECASNLACINEKCRDPCPGSCGYNAQCKVIN 69
             ++Q  PSC+CLP+++GAPPNCRPEC +++EC SNLACI E+C DPCPGSCGY A+C V+N
Sbjct: 12375 NVQGVPSCTCLPDFLGAPPNCRPECTISAECPSNLACIRERCIDPCPGSCGYAAECSVVN 12434

Query: 70    HTPICTCPEGYIGDPFSSCFPKPP 93
             HTPIC CP G+ GDPFSSC P PP
Sbjct: 12435 HTPICVCPAGFTGDPFSSCRPAPP 12458

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|442625910|ref|NP_001260033.1| dumpy, isoform R [Drosophila melanogaster] gi|440213318|gb|AGB92569.1| dumpy, isoform R [Drosophila melanogaster]

 Score =  128 bits (321), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 58/84 (69%), Positives = 71/84 (84%)

Query: 10    SMQSNPSCSCLPNYIGAPPNCRPECVMNSECASNLACINEKCRDPCPGSCGYNAQCKVIN 69
             ++Q  PSC+CLP+++GAPPNCRPEC +++EC SNLACI E+C DPCPGSCGY A+C V+N
Sbjct: 12905 NVQGVPSCTCLPDFLGAPPNCRPECTISAECPSNLACIRERCIDPCPGSCGYAAECSVVN 12964

Query: 70    HTPICTCPEGYIGDPFSSCFPKPP 93
             HTPIC CP G+ GDPFSSC P PP
Sbjct: 12965 HTPICVCPAGFTGDPFSSCRPAPP 12988

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	98
FB|FBgn0053196	22	dp "dumpy" [Drosophila melanog	0.908	4.045	0.695	7.9e-33
WB|WBGene00019066	267	sdz-23 [Caenorhabditis elegans	0.540	0.198	0.333	2.4e-06
ZFIN|ZDB-GENE-050208-554	2553	stab1 "stabilin 1" [Danio reri	0.765	0.029	0.329	0.00051
UNIPROTKB|I3LH42	211	LOC100623198 "Uncharacterized	0.724	0.336	0.333	4.2e-05
RGD|1586373	284	LOC689927 "similar to keratin	0.683	0.235	0.320	8.3e-05
UNIPROTKB|D4A6T7	979	Ltbp1 "Latent-transforming gro	0.581	0.058	0.375	8.5e-05
FB|FBgn0026403	1370	Ndg "Nidogen/entactin" [Drosop	0.459	0.032	0.365	8.8e-05
WB|WBGene00012917	756	Y46G5A.29 [Caenorhabditis eleg	0.642	0.083	0.368	0.0001
UNIPROTKB|B5MEF5	1380	SNED1 "Sushi, nidogen and EGF-	0.5	0.035	0.403	0.00014
UNIPROTKB|Q8TER0	1413	SNED1 "Sushi, nidogen and EGF-	0.5	0.034	0.403	0.00015

FB|FBgn0053196 dp "dumpy" [Drosophila melanogaster (taxid:7227)]

 Score = 385 (140.6 bits), Expect = 7.9e-33, P = 7.9e-33
 Identities = 64/92 (69%), Positives = 72/92 (78%)

Query:     8 QCSM-QSNPSCSCLPNYIGAPPNCRPECVMNSECASNLACINEKCRDPCPGSCGYNAQCK 66
             QC +     SCSCLPNY+GA PNCRPEC +N+EC SNLACINEKCRDPCPG+CG+ AQC 
Sbjct: 20243 QCRVVNGGASCSCLPNYVGAAPNCRPECTINAECPSNLACINEKCRDPCPGACGFAAQCS 20302

Query:    67 VINHTPICTCPEGYIGDPFSSC--FPKPPERK 96
             VINHTP C+CP GY GDPF+SC   P PP  K
Sbjct: 20303 VINHTPSCSCPAGYTGDPFTSCRVLPPPPPPK 20334

GO:0007475 "apposition of dorsal and ventral imaginal disc-derived wing surfaces" evidence=IMP

GO:0005578 "proteinaceous extracellular matrix" evidence=NAS

GO:0007424 "open tracheal system development" evidence=IMP

GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA

GO:0004867 "serine-type endopeptidase inhibitor activity" evidence=IEA

GO:0004519 "endonuclease activity" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0008362 "chitin-based embryonic cuticle biosynthetic process" evidence=IMP

GO:0040005 "chitin-based cuticle attachment to epithelium" evidence=IMP

GO:0031012 "extracellular matrix" evidence=ISM

GO:0005201 "extracellular matrix structural constituent" evidence=ISM

GO:0046331 "lateral inhibition" evidence=IMP

WB|WBGene00019066 sdz-23 [Caenorhabditis elegans (taxid:6239)]

 Score = 96 (38.9 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
 Identities = 22/66 (33%), Positives = 30/66 (45%)

Query:    19 CLPNYIGAPPNCRPECVMNSECASNLACINEKCRDPCPG-SCGYNAQCKVINHTPICTCP 77
             CLP++ G  P C+  C    +C+          RD CP   C  N+QC+       C C 
Sbjct:   131 CLPSFYG--PKCQYYCTSGEKCS----------RDECPKRKCQNNSQCQFDGSESKCVCQ 178

Query:    78 EGYIGD 83
              GYIG+
Sbjct:   179 SGYIGE 184

GO:0016021 "integral to membrane" evidence=IEA

ZFIN|ZDB-GENE-050208-554 stab1 "stabilin 1" [Danio rerio (taxid:7955)]

 Score = 104 (41.7 bits), Expect = 0.00051, P = 0.00051
 Identities = 31/94 (32%), Positives = 39/94 (41%)

Query:    17 CSCLPNYIG-----APPNCRPECVMNSECA----SNLAC-------INEKCRDPCP-GSC 59
             C C P YIG        +C   C + S C     +N  C         + C D CP G+C
Sbjct:   171 CYCQPPYIGPKCDKVSSSCS-SCPLYSYCKGDDDTNAVCECLPGNKFGQACLDVCPEGTC 229

Query:    60 GYNAQCKVINHTPICTCPEGYIGDPFSSCFPKPP 93
             G NA+C   +    C C EG+ GD    C P  P
Sbjct:   230 GINAKCLSKDDKYNCECKEGFEGDG-KHCIPINP 262

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0005540 "hyaluronic acid binding" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

UNIPROTKB|I3LH42 LOC100623198 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 100 (40.3 bits), Expect = 4.2e-05, P = 4.2e-05
 Identities = 27/81 (33%), Positives = 33/81 (40%)

Query:    15 PSCSCLPNYIGAPPNCRPECVMNSECASNLACINEKCRDPCPGSC-----GYNAQCKVIN 69
             P C C P     P  C P C   S C++ L C  + C  PCP SC       +  C+ + 
Sbjct:   103 PVC-CTP-VCCTPVCCTPVCCEASPCSAALCC--QPCPCPCPSSCCRPSSSVSLLCRPVC 158

Query:    70 HTPICTCPEGYIGDPFSSCFP 90
               P C  P    G P S C P
Sbjct:   159 R-PACCVPVSSCGAPASCCQP 178

GO:0045095 "keratin filament" evidence=IEA

RGD|1586373 LOC689927 "similar to keratin associated protein 10-10" [Rattus norvegicus (taxid:10116)]

 Score = 100 (40.3 bits), Expect = 8.3e-05, P = 8.3e-05
 Identities = 25/78 (32%), Positives = 35/78 (44%)

Query:     9 CSMQSN--PSC-SCLP--NYIGAPPNCRPECVMNSECASNLACINEKCR------DPCPG 57
             C  QS+  P+C +C P     G    C+P C +   C ++ +C    C        PC  
Sbjct:    90 CCQQSSCQPACCTCSPCQQSCGVTLCCKPVCCVPVCCGASSSCQQSSCEPSCCTSSPCQQ 149

Query:    58 SCGYNAQCKVINHTPICT 75
             SCG    CK +  TPIC+
Sbjct:   150 SCGVTLCCKPVCCTPICS 167

GO:0045095 "keratin filament" evidence=IEA

UNIPROTKB|D4A6T7 Ltbp1 "Latent-transforming growth factor beta-binding protein 1" [Rattus norvegicus (taxid:10116)]

 Score = 85 (35.0 bits), Expect = 8.5e-05, Sum P(2) = 8.5e-05
 Identities = 24/64 (37%), Positives = 32/64 (50%)

Query:    33 ECVMNSECASNLAC--INEKCRDPCPGSCGYNAQCKVINHTPICTCPEGYIGDP-FSSCF 89
             EC+   +  +N  C  INE C+    G C  N +C     +  C+C  G+  DP FSSC 
Sbjct:   285 ECLQGYKRVNNTFCQDINE-CQ--LQGVCP-NGECLNTMGSYRCSCKMGFGPDPTFSSCV 340

Query:    90 PKPP 93
             P PP
Sbjct:   341 PDPP 344

GO:0005509 "calcium ion binding" evidence=IEA

FB|FBgn0026403 Ndg "Nidogen/entactin" [Drosophila melanogaster (taxid:7227)]

 Score = 73 (30.8 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
 Identities = 19/52 (36%), Positives = 27/52 (51%)

Query:    47 INEKC--RDPCPGS--CGYNAQCKVINHTPI--CTCPEGYIGDPFSSCFPKP 92
             ++++C     C GS  CG NA CK  +   +  C C +GY GD  + C  KP
Sbjct:   926 VSDRCVPAGRC-GSVFCGSNAICKWDSAEGVQYCDCLDGYQGDALTGCTSKP 976

GO:0005604 "basement membrane" evidence=ISS

GO:0007160 "cell-matrix adhesion" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

WB|WBGene00012917 Y46G5A.29 [Caenorhabditis elegans (taxid:6239)]

 Score = 105 (42.0 bits), Expect = 0.00010, P = 0.00010
 Identities = 28/76 (36%), Positives = 39/76 (51%)

Query:     8 QCSMQSNPS-CSCLPNYIGAPPNCRP--ECVMNSECASNLACINEKCRDPCPGSCGYNAQ 64
             +CSM    S C C P Y+GA  NC    +C+ N EC +N  C N+K R P     GY+ +
Sbjct:   380 RCSMSKGKSTCQCNPGYVGA--NCTEIDKCLDN-ECDNNSTCFNDK-RSPV----GYSCK 431

Query:    65 CKVINHTPICT--CPE 78
             C+      +C   CP+
Sbjct:   432 CQNGTVGKLCEIECPK 447

GO:0005509 "calcium ion binding" evidence=IEA

UNIPROTKB|B5MEF5 SNED1 "Sushi, nidogen and EGF-like domain-containing protein 1" [Homo sapiens (taxid:9606)]

 Score = 77 (32.2 bits), Expect = 0.00014, Sum P(2) = 0.00014
 Identities = 21/52 (40%), Positives = 22/52 (42%)

Query:    49 EKCRDPCPGS-CGYNAQCKVINHTPICTCPEGYIG-DPFSSCFPKPPERKCE 98
             E   DPC  S CG    C   N +  CTC  GY G D     FP P   K E
Sbjct:   865 ETVSDPCFSSPCGGRGYCLASNGSHSCTCKVGYTGEDCAKELFP-PTALKME 915

GO:0005509 "calcium ion binding" evidence=IEA

GO:0007160 "cell-matrix adhesion" evidence=IEA

UNIPROTKB|Q8TER0 SNED1 "Sushi, nidogen and EGF-like domain-containing protein 1" [Homo sapiens (taxid:9606)]

 Score = 77 (32.2 bits), Expect = 0.00015, Sum P(2) = 0.00015
 Identities = 21/52 (40%), Positives = 22/52 (42%)

Query:    49 EKCRDPCPGS-CGYNAQCKVINHTPICTCPEGYIG-DPFSSCFPKPPERKCE 98
             E   DPC  S CG    C   N +  CTC  GY G D     FP P   K E
Sbjct:   865 ETVSDPCFSSPCGGRGYCLASNGSHSCTCKVGYTGEDCAKELFP-PTALKME 915

GO:0005509 "calcium ion binding" evidence=IEA

GO:0007160 "cell-matrix adhesion" evidence=IEA

GO:0005576 "extracellular region" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	98
KOG1214|consensus	1289		99.47
PF12947	36	EGF_3: EGF domain; InterPro: IPR024731 This entry	98.98
KOG1214|consensus	1289		98.94
PF12947	36	EGF_3: EGF domain; InterPro: IPR024731 This entry	98.68
KOG1219|consensus	4289		98.54
PF07645	42	EGF_CA: Calcium-binding EGF domain; InterPro: IPR0	98.4
PF00008	32	EGF: EGF-like domain This is a sub-family of the P	98.31
KOG4289|consensus	2531		98.22
smart00179	39	EGF_CA Calcium-binding EGF-like domain.	98.06
KOG4260|consensus	350		97.71
KOG4289|consensus	2531		97.68
cd00053	36	EGF Epidermal growth factor domain, found in epide	97.63
cd00054	38	EGF_CA Calcium-binding EGF-like domain, present in	97.61
PF00008	32	EGF: EGF-like domain This is a sub-family of the P	97.53
smart00181	35	EGF Epidermal growth factor-like domain.	97.47
KOG1225|consensus	525		97.45
PF06247	197	Plasmod_Pvs28: Plasmodium ookinete surface protein	97.37
PF12662	24	cEGF: Complement Clr-like EGF-like	97.29
PF07645	42	EGF_CA: Calcium-binding EGF domain; InterPro: IPR0	97.28
smart00179	39	EGF_CA Calcium-binding EGF-like domain.	97.17
PF12946	37	EGF_MSP1_1: MSP1 EGF domain 1; InterPro: IPR024730	96.95
cd00053	36	EGF Epidermal growth factor domain, found in epide	96.94
KOG1217|consensus	487		96.93
KOG1217|consensus	487		96.91
smart00181	35	EGF Epidermal growth factor-like domain.	96.66
cd00054	38	EGF_CA Calcium-binding EGF-like domain, present in	96.53
PF12946	37	EGF_MSP1_1: MSP1 EGF domain 1; InterPro: IPR024730	96.51
PF12662	24	cEGF: Complement Clr-like EGF-like	96.4
PF14670	36	FXa_inhibition: Coagulation Factor Xa inhibitory s	96.19
KOG1225|consensus	525		96.13
PF07974	32	EGF_2: EGF-like domain; InterPro: IPR013111 A sequ	96.09
KOG1219|consensus	4289		96.08
PF12661	13	hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E	95.53
PF06247	197	Plasmod_Pvs28: Plasmodium ookinete surface protein	95.17
KOG4260|consensus	350		95.01
PF07974	32	EGF_2: EGF-like domain; InterPro: IPR013111 A sequ	94.67
cd01475	224	vWA_Matrilin VWA_Matrilin: In cartilaginous plate,	93.91
PF00954	110	S_locus_glycop: S-locus glycoprotein family; Inter	93.83
PF14670	36	FXa_inhibition: Coagulation Factor Xa inhibitory s	93.16
KOG1226|consensus	783		93.12
PF01683	52	EB: EB module; InterPro: IPR006149 The EB domain h	91.76
PHA02887	126	EGF-like protein; Provisional	88.38
smart00051	63	DSL delta serrate ligand.	87.17
PHA02887	126	EGF-like protein; Provisional	86.89
KOG0994|consensus	1758		82.76

>KOG1214|consensus

Probab=99.47  E-value=4.6e-14  Score=115.13  Aligned_cols=71  Identities=34%  Similarity=0.762  Sum_probs=59.7

Q ss_pred             CcEEe--cCCCCeEEcCCCcEeCCCCCcc--cCcCCCCCCCCceeeCCeecCCCCCCCCCCCeeEecCCccEEeCCCCCe
Q psy5614           6 WIQCS--MQSNPSCSCLPNYIGAPPNCRP--ECVMNSECASNLACINEKCRDPCPGSCGYNAQCKVINHTPICTCPEGYI   81 (98)
Q Consensus         6 ~a~C~--~~g~~~C~C~~Gy~Gdg~~C~~--eC~~~~~C~~~~~C~~~~C~d~C~~~C~~~a~C~~~~g~~~C~C~~Gy~   81 (98)
                      +++|+  ..+.|+|.|+|||.|||..|.+  ||..                    +.|+++|.|+|+.++|.|+|++||.
T Consensus       798 ~a~c~~hGgs~y~C~CLPGfsGDG~~c~dvDeC~p--------------------srChp~A~CyntpgsfsC~C~pGy~  857 (1289)
T KOG1214|consen  798 QARCVHHGGSTYSCACLPGFSGDGHQCTDVDECSP--------------------SRCHPAATCYNTPGSFSCRCQPGYY  857 (1289)
T ss_pred             ceEEEecCCceEEEeecCCccCCccccccccccCc--------------------cccCCCceEecCCCcceeecccCcc
Confidence            34566  6789999999999999998863  4542                    5799999999999999999999999


Q ss_pred             eCCCCCCccC-CCCCCC
Q psy5614          82 GDPFSSCFPK-PPERKC   97 (98)
Q Consensus        82 G~g~~~C~~~-~~~~~c   97 (98)
                      |||+ +|+|. .+-.+|
T Consensus       858 GDGf-~CVP~~~~~T~C  873 (1289)
T KOG1214|consen  858 GDGF-QCVPDTSSLTPC  873 (1289)
T ss_pred             CCCc-eecCCCccCCcc
Confidence            9999 89997 555555

>PF12947 EGF_3: EGF domain; InterPro: IPR024731 This entry represents an EGF domain found in the the C terminus of malarial parasite merozoite surface protein 1 [], as well as other proteins

Probab=98.98  E-value=2.1e-10  Score=60.67  Aligned_cols=31  Identities=45%  Similarity=0.938  Sum_probs=25.9

Q ss_pred             CCCCCCCeeEecCCccEEeCCCCCeeCCCCCC
Q psy5614          57 GSCGYNAQCKVINHTPICTCPEGYIGDPFSSC   88 (98)
Q Consensus        57 ~~C~~~a~C~~~~g~~~C~C~~Gy~G~g~~~C   88 (98)
                      +.|+++|+|+++.++|+|+|++||.|||+ .|
T Consensus         6 ~~C~~nA~C~~~~~~~~C~C~~Gy~GdG~-~C   36 (36)
T PF12947_consen    6 GGCHPNATCTNTGGSYTCTCKPGYEGDGF-FC   36 (36)
T ss_dssp             GGS-TTCEEEE-TTSEEEEE-CEEECCST-CE
T ss_pred             CCCCCCcEeecCCCCEEeECCCCCccCCc-CC
Confidence            57999999999999999999999999998 44

; PDB: 2NPR_A 1N1I_C 1B9W_A 1YO8_A 2RHP_A.

>KOG1214|consensus

Probab=98.94  E-value=2e-09  Score=88.62  Aligned_cols=88  Identities=30%  Similarity=0.696  Sum_probs=68.0

Q ss_pred             ccCCcEEe--cCCCCeEEcCCCcEeCCCCCcc--cCcC-CCCCCCCceeeC-------------------Ceec------
Q psy5614           3 WLMWIQCS--MQSNPSCSCLPNYIGAPPNCRP--ECVM-NSECASNLACIN-------------------EKCR------   52 (98)
Q Consensus         3 ~~~~a~C~--~~g~~~C~C~~Gy~Gdg~~C~~--eC~~-~~~C~~~~~C~~-------------------~~C~------   52 (98)
                      |..++.|.  ..-.|+|.|..||.|+|+.|.+  ||.. ...|.++.+|++                   .+|+      
T Consensus       702 cdt~a~C~pg~~~~~tcecs~g~~gdgr~c~d~~eca~~~~~CGp~s~Cin~pg~~rceC~~gy~F~dd~~tCV~i~~pa  781 (1289)
T KOG1214|consen  702 CDTTARCHPGTGVDYTCECSSGYQGDGRNCVDENECATGFHRCGPNSVCINLPGSYRCECRSGYEFADDRHTCVLITPPA  781 (1289)
T ss_pred             cCCCccccCCCCcceEEEEeeccCCCCCCCCChhhhccCCCCCCCCceeecCCCceeEEEeecceeccCCcceEEecCCC
Confidence            67889999  6678999999999999999985  6664 356777777742                   4666      


Q ss_pred             --CCCC---CCCCCCC--eeEecCC-ccEEeCCCCCeeCCCCCCccC
Q psy5614          53 --DPCP---GSCGYNA--QCKVINH-TPICTCPEGYIGDPFSSCFPK   91 (98)
Q Consensus        53 --d~C~---~~C~~~a--~C~~~~g-~~~C~C~~Gy~G~g~~~C~~~   91 (98)
                        ++|.   +.|+.++  .|+..++ .|+|+|.|||.|||+ .|...
T Consensus       782 p~n~Ce~g~h~C~i~g~a~c~~hGgs~y~C~CLPGfsGDG~-~c~dv  827 (1289)
T KOG1214|consen  782 PANPCEDGSHTCAIAGQARCVHHGGSTYSCACLPGFSGDGH-QCTDV  827 (1289)
T ss_pred             CCCccccCccccCcCCceEEEecCCceEEEeecCCccCCcc-ccccc
Confidence              5673   6888755  5666555 899999999999998 56554

>PF12947 EGF_3: EGF domain; InterPro: IPR024731 This entry represents an EGF domain found in the the C terminus of malarial parasite merozoite surface protein 1 [], as well as other proteins

Probab=98.68  E-value=1.1e-08  Score=54.06  Aligned_cols=29  Identities=24%  Similarity=0.536  Sum_probs=24.0

Q ss_pred             CccCCcEEe-cCCCCeEEcCCCcEeCCCCC
Q psy5614           2 SWLMWIQCS-MQSNPSCSCLPNYIGAPPNC   30 (98)
Q Consensus         2 ~~~~~a~C~-~~g~~~C~C~~Gy~Gdg~~C   30 (98)
                      .|+++|+|+ +.++|+|+|++||.|||+.|
T Consensus         7 ~C~~nA~C~~~~~~~~C~C~~Gy~GdG~~C   36 (36)
T PF12947_consen    7 GCHPNATCTNTGGSYTCTCKPGYEGDGFFC   36 (36)
T ss_dssp             GS-TTCEEEE-TTSEEEEE-CEEECCSTCE
T ss_pred             CCCCCcEeecCCCCEEeECCCCCccCCcCC
Confidence            489999999 88899999999999999875

; PDB: 2NPR_A 1N1I_C 1B9W_A 1YO8_A 2RHP_A.

>KOG1219|consensus

Probab=98.54  E-value=1.2e-07  Score=84.19  Aligned_cols=79  Identities=25%  Similarity=0.665  Sum_probs=65.1

Q ss_pred             ccCCcEEe--cCCCCeEEcCCCcEeCCCCCcc---cCcCCCCCCCCcee---------------eCCeec----CCCC-C
Q psy5614           3 WLMWIQCS--MQSNPSCSCLPNYIGAPPNCRP---ECVMNSECASNLAC---------------INEKCR----DPCP-G   57 (98)
Q Consensus         3 ~~~~a~C~--~~g~~~C~C~~Gy~Gdg~~C~~---eC~~~~~C~~~~~C---------------~~~~C~----d~C~-~   57 (98)
                      |...++|.  ..++|.|.|++-|+|  .+|+.   .|.. .+|..+++|               ++.+|+    ++|+ .
T Consensus      3872 CqhgG~C~~~~~ggy~CkCpsqysG--~~CEi~~epC~s-nPC~~GgtCip~~n~f~CnC~~gyTG~~Ce~~Gi~eCs~n 3948 (4289)
T KOG1219|consen 3872 CQHGGTCISQPKGGYKCKCPSQYSG--NHCEIDLEPCAS-NPCLTGGTCIPFYNGFLCNCPNGYTGKRCEARGISECSKN 3948 (4289)
T ss_pred             ccCCCEecCCCCCceEEeCcccccC--cccccccccccC-CCCCCCCEEEecCCCeeEeCCCCccCceeecccccccccc
Confidence            67889999  778999999999999  78873   3543 356655555               256888    7897 8


Q ss_pred             CCCCCCeeEecCCccEEeCCCCCeeCC
Q psy5614          58 SCGYNAQCKVINHTPICTCPEGYIGDP   84 (98)
Q Consensus        58 ~C~~~a~C~~~~g~~~C~C~~Gy~G~g   84 (98)
                      +|..++.|+|..|+|.|.|-+||.|.+
T Consensus      3949 ~C~~gg~C~n~~gsf~CncT~g~~gr~ 3975 (4289)
T KOG1219|consen 3949 VCGTGGQCINIPGSFHCNCTPGILGRT 3975 (4289)
T ss_pred             cccCCceeeccCCceEeccChhHhccc
Confidence            999999999999999999999999865

>PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins

Probab=98.40  E-value=2.7e-07  Score=49.91  Aligned_cols=29  Identities=34%  Similarity=0.843  Sum_probs=26.0

Q ss_pred             CCCC---CCCCCCCeeEecCCccEEeCCCCCe
Q psy5614          53 DPCP---GSCGYNAQCKVINHTPICTCPEGYI   81 (98)
Q Consensus        53 d~C~---~~C~~~a~C~~~~g~~~C~C~~Gy~   81 (98)
                      |||.   +.|..++.|+|+.|+|+|.|++||.
T Consensus         3 dEC~~~~~~C~~~~~C~N~~Gsy~C~C~~Gy~   34 (42)
T PF07645_consen    3 DECAEGPHNCPENGTCVNTEGSYSCSCPPGYE   34 (42)
T ss_dssp             STTTTTSSSSSTTSEEEEETTEEEEEESTTEE
T ss_pred             cccCCCCCcCCCCCEEEcCCCCEEeeCCCCcE
Confidence            4563   6899999999999999999999998

Many of these proteins require calcium for their biological function and a calcium-binding site has been found at the N terminus of some EGF-like domains []. Calcium-binding may be crucial for numerous protein-protein interactions. For human coagulation factor IX it has been shown [] that the calcium-ligands form a pentagonal bipyramid. The first, third and fourth conserved negatively charged or polar residues are side chain ligands. The latter is possibly hydroxylated (see aspartic acid and asparagine hydroxylation site) []. A conserved aromatic residue, as well as the second conserved negative residue, are thought to be involved in stabilising the calcium-binding site. As in non-calcium binding EGF-like domains, there are six conserved cysteines and the structure of both types is very similar as calcium-binding induces only strictly local structural changes []. +------------------+ +---------+ | | | | nxnnC-x(3,14)-C-x(3,7)-CxxbxxxxaxC-x(1,6)-C-x(8,13)-Cx | | +------------------+ 'n': negatively charged or polar residue [DEQN] 'b': possibly beta-hydroxylated residue [DN] 'a': aromatic amino acid 'C': cysteine, involved in disulphide bond 'x': any amino acid. ; GO: 0005509 calcium ion binding; PDB: 2VJ3_A 1TOZ_A 1LMJ_A 1UZQ_A 1UZK_A 1UZJ_B 1UZP_A 1EMO_A 1EMN_A 2RR0_A ....

>PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=98.31  E-value=3.8e-07  Score=46.74  Aligned_cols=27  Identities=30%  Similarity=0.789  Sum_probs=25.2

Q ss_pred             CCCCCCCeeEecC-CccEEeCCCCCeeC
Q psy5614          57 GSCGYNAQCKVIN-HTPICTCPEGYIGD   83 (98)
Q Consensus        57 ~~C~~~a~C~~~~-g~~~C~C~~Gy~G~   83 (98)
                      .+|.++|+|+... +.|+|+|++||+|+
T Consensus         4 ~~C~n~g~C~~~~~~~y~C~C~~G~~G~   31 (32)
T PF00008_consen    4 NPCQNGGTCIDLPGGGYTCECPPGYTGK   31 (32)
T ss_dssp             TSSTTTEEEEEESTSEEEEEEBTTEEST
T ss_pred             CcCCCCeEEEeCCCCCEEeECCCCCccC
Confidence            5899999999998 89999999999996

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length.; GO: 0005515 protein binding; PDB: 1WHE_A 1CCF_A 1APO_A 1WHF_A 2VJ3_A 1TOZ_A 4D90_B 3CFW_A 1EDM_B 1IXA_A ....

>KOG4289|consensus

Probab=98.22  E-value=1.1e-06  Score=76.02  Aligned_cols=54  Identities=31%  Similarity=0.843  Sum_probs=44.5

Q ss_pred             cCCCCeEEcCCCcEeCCCCCcccCcCCCCCCCCceeeCCeecCCC-CCCCCCCCeeEecCCccEEeCCCCCeeCC
Q psy5614          11 MQSNPSCSCLPNYIGAPPNCRPECVMNSECASNLACINEKCRDPC-PGSCGYNAQCKVINHTPICTCPEGYIGDP   84 (98)
Q Consensus        11 ~~g~~~C~C~~Gy~Gdg~~C~~eC~~~~~C~~~~~C~~~~C~d~C-~~~C~~~a~C~~~~g~~~C~C~~Gy~G~g   84 (98)
                      ..++++|.|++||+||  .|+.|    .              |+| +++|.+|+.|....|.|+|.|++||+|..
T Consensus      1218 pvnglrCrCPpGFTgd--~CeTe----i--------------DlCYs~pC~nng~C~srEggYtCeCrpg~tGeh 1272 (2531)
T KOG4289|consen 1218 PVNGLRCRCPPGFTGD--YCETE----I--------------DLCYSGPCGNNGRCRSREGGYTCECRPGFTGEH 1272 (2531)
T ss_pred             ccCceeEeCCCCCCcc--cccch----h--------------HhhhcCCCCCCCceEEecCceeEEecCCccccc
Confidence            4578999999999995  66532    0              344 37999999999999999999999999965

>smart00179 EGF_CA Calcium-binding EGF-like domain

Probab=98.06  E-value=7.8e-06  Score=42.31  Aligned_cols=32  Identities=31%  Similarity=0.728  Sum_probs=26.5

Q ss_pred             CCCC--CCCCCCCeeEecCCccEEeCCCCCeeCCC
Q psy5614          53 DPCP--GSCGYNAQCKVINHTPICTCPEGYIGDPF   85 (98)
Q Consensus        53 d~C~--~~C~~~a~C~~~~g~~~C~C~~Gy~G~g~   85 (98)
                      |+|.  .+|..++.|+++.++|+|.|++||+ +|.
T Consensus         3 ~~C~~~~~C~~~~~C~~~~g~~~C~C~~g~~-~g~   36 (39)
T smart00179        3 DECASGNPCQNGGTCVNTVGSYRCECPPGYT-DGR   36 (39)
T ss_pred             ccCcCCCCcCCCCEeECCCCCeEeECCCCCc-cCC
Confidence            4553  5799999999999999999999999 443

>KOG4260|consensus

Probab=97.71  E-value=2.7e-05  Score=57.81  Aligned_cols=78  Identities=27%  Similarity=0.606  Sum_probs=54.3

Q ss_pred             ccCCcEEe----cCCCCeEEcCCCcEeCCCCCcc-----------c-------CcCC--CCCCCC--c---eee------
Q psy5614           3 WLMWIQCS----MQSNPSCSCLPNYIGAPPNCRP-----------E-------CVMN--SECASN--L---ACI------   47 (98)
Q Consensus         3 ~~~~a~C~----~~g~~~C~C~~Gy~Gdg~~C~~-----------e-------C~~~--~~C~~~--~---~C~------   47 (98)
                      |.-+++|.    ..|+..|.|.+||+|  ..|.+           +       |...  ..|...  .   .|.      
T Consensus       152 C~GnG~C~GdGsR~GsGkCkC~~GY~G--p~C~~Cg~eyfes~Rne~~lvCt~Ch~~C~~~Csg~~~k~C~kCkkGW~ld  229 (350)
T KOG4260|consen  152 CFGNGSCHGDGSREGSGKCKCETGYTG--PLCRYCGIEYFESSRNEQHLVCTACHEGCLGVCSGESSKGCSKCKKGWKLD  229 (350)
T ss_pred             cCCCCcccCCCCCCCCCcccccCCCCC--ccccccchHHHHhhcccccchhhhhhhhhhcccCCCCCCChhhhcccceec
Confidence            56778887    567889999999999  45541           0       1110  122211  1   121      


Q ss_pred             CCeec--CCCC---CCCCCCCeeEecCCccEEeCCCCCee
Q psy5614          48 NEKCR--DPCP---GSCGYNAQCKVINHTPICTCPEGYIG   82 (98)
Q Consensus        48 ~~~C~--d~C~---~~C~~~a~C~~~~g~~~C~C~~Gy~G   82 (98)
                      -..|+  |+|.   .+|.+...|+|+.|||.|.+++||.+
T Consensus       230 e~gCvDvnEC~~ep~~c~~~qfCvNteGSf~C~dk~Gy~~  269 (350)
T KOG4260|consen  230 EEGCVDVNECQNEPAPCKAHQFCVNTEGSFKCEDKEGYKK  269 (350)
T ss_pred             ccccccHHHHhcCCCCCChhheeecCCCceEecccccccC
Confidence            13566  7883   79999999999999999999999988

>KOG4289|consensus

Probab=97.68  E-value=5e-05  Score=66.21  Aligned_cols=61  Identities=25%  Similarity=0.630  Sum_probs=47.4

Q ss_pred             CccCCcEEe-cCCCCeEEcCCCcEeCCCCCcccCcCCCCCCCCceeeCCeecCCCCCCCCCCCeeEec-CCccEEeCCCC
Q psy5614           2 SWLMWIQCS-MQSNPSCSCLPNYIGAPPNCRPECVMNSECASNLACINEKCRDPCPGSCGYNAQCKVI-NHTPICTCPEG   79 (98)
Q Consensus         2 ~~~~~a~C~-~~g~~~C~C~~Gy~Gdg~~C~~eC~~~~~C~~~~~C~~~~C~d~C~~~C~~~a~C~~~-~g~~~C~C~~G   79 (98)
                      -|.+|++|. ..|+|+|+|++||+|  .+|+-. .....|.+              +.|.+.++|++. +|.|.|.|+.|
T Consensus      1246 pC~nng~C~srEggYtCeCrpg~tG--ehCEvs-~~agrCvp--------------GvC~nggtC~~~~nggf~c~Cp~g 1308 (2531)
T KOG4289|consen 1246 PCGNNGRCRSREGGYTCECRPGFTG--EHCEVS-ARAGRCVP--------------GVCKNGGTCVNLLNGGFCCHCPYG 1308 (2531)
T ss_pred             CCCCCCceEEecCceeEEecCCccc--cceeee-cccCcccc--------------ceecCCCEEeecCCCceeccCCCc
Confidence            378999999 999999999999999  777521 01122222              578999999995 67999999998

>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium

Probab=97.63  E-value=7.1e-05  Score=37.43  Aligned_cols=27  Identities=33%  Similarity=0.840  Sum_probs=25.0

Q ss_pred             CCCCCCCeeEecCCccEEeCCCCCeeC
Q psy5614          57 GSCGYNAQCKVINHTPICTCPEGYIGD   83 (98)
Q Consensus        57 ~~C~~~a~C~~~~g~~~C~C~~Gy~G~   83 (98)
                      .+|.+++.|++..+.|+|.|++||.|+
T Consensus         6 ~~C~~~~~C~~~~~~~~C~C~~g~~g~   32 (36)
T cd00053           6 NPCSNGGTCVNTPGSYRCVCPPGYTGD   32 (36)
T ss_pred             CCCCCCCEEecCCCCeEeECCCCCccc
Confidence            578889999999999999999999997

>cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

Probab=97.61  E-value=8.7e-05  Score=37.68  Aligned_cols=27  Identities=30%  Similarity=0.764  Sum_probs=24.4

Q ss_pred             CCCCCCCeeEecCCccEEeCCCCCeeC
Q psy5614          57 GSCGYNAQCKVINHTPICTCPEGYIGD   83 (98)
Q Consensus        57 ~~C~~~a~C~~~~g~~~C~C~~Gy~G~   83 (98)
                      .+|.+++.|++..+.|+|.|++||.|.
T Consensus         9 ~~C~~~~~C~~~~~~~~C~C~~g~~g~   35 (38)
T cd00054           9 NPCQNGGTCVNTVGSYRCSCPPGYTGR   35 (38)
T ss_pred             CCcCCCCEeECCCCCeEeECCCCCcCC
Confidence            478888999999999999999999883

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.

>PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=97.53  E-value=5.3e-05  Score=38.63  Aligned_cols=25  Identities=24%  Similarity=0.546  Sum_probs=22.4

Q ss_pred             CccCCcEEe-cC-CCCeEEcCCCcEeC
Q psy5614           2 SWLMWIQCS-MQ-SNPSCSCLPNYIGA   26 (98)
Q Consensus         2 ~~~~~a~C~-~~-g~~~C~C~~Gy~Gd   26 (98)
                      .|..+|+|+ .. +.|+|+|++||+|.
T Consensus         5 ~C~n~g~C~~~~~~~y~C~C~~G~~G~   31 (32)
T PF00008_consen    5 PCQNGGTCIDLPGGGYTCECPPGYTGK   31 (32)
T ss_dssp             SSTTTEEEEEESTSEEEEEEBTTEEST
T ss_pred             cCCCCeEEEeCCCCCEEeECCCCCccC
Confidence            488899999 66 99999999999994

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length.; GO: 0005515 protein binding; PDB: 1WHE_A 1CCF_A 1APO_A 1WHF_A 2VJ3_A 1TOZ_A 4D90_B 3CFW_A 1EDM_B 1IXA_A ....

>smart00181 EGF Epidermal growth factor-like domain

Probab=97.47  E-value=0.00018  Score=36.50  Aligned_cols=26  Identities=38%  Similarity=0.982  Sum_probs=23.4

Q ss_pred             CCCCCCCeeEecCCccEEeCCCCCeeC
Q psy5614          57 GSCGYNAQCKVINHTPICTCPEGYIGD   83 (98)
Q Consensus        57 ~~C~~~a~C~~~~g~~~C~C~~Gy~G~   83 (98)
                      .+|..+ .|++..++|+|.|++||.|+
T Consensus         6 ~~C~~~-~C~~~~~~~~C~C~~g~~g~   31 (35)
T smart00181        6 GPCSNG-TCINTPGSYTCSCPPGYTGD   31 (35)
T ss_pred             CCCCCC-EEECCCCCeEeECCCCCccC
Confidence            378888 99999999999999999996

>KOG1225|consensus

Probab=97.45  E-value=0.00026  Score=56.53  Aligned_cols=62  Identities=31%  Similarity=0.962  Sum_probs=37.8

Q ss_pred             CCeEEcCCCcEeCCCCCcc-cCcCCCCCCCCceeeCCeec------------CCCCCCCCCCCeeEecCCccEEeCCCCC
Q psy5614          14 NPSCSCLPNYIGAPPNCRP-ECVMNSECASNLACINEKCR------------DPCPGSCGYNAQCKVINHTPICTCPEGY   80 (98)
Q Consensus        14 ~~~C~C~~Gy~Gdg~~C~~-eC~~~~~C~~~~~C~~~~C~------------d~C~~~C~~~a~C~~~~g~~~C~C~~Gy   80 (98)
                      ..+|.|++||+|  ..|.. .|...  |+.+..+++..|+            ..|+..|..++.|+    .-+|.|.+||
T Consensus       264 ~G~CIC~~Gf~G--~dC~e~~Cp~~--cs~~g~~~~g~CiC~~g~~G~dCs~~~cpadC~g~G~Ci----~G~C~C~~Gy  335 (525)
T KOG1225|consen  264 EGRCICPPGFTG--DDCDELVCPVD--CSGGGVCVDGECICNPGYSGKDCSIRRCPADCSGHGKCI----DGECLCDEGY  335 (525)
T ss_pred             CCeEeCCCCCcC--CCCCcccCCcc--cCCCceecCCEeecCCCccccccccccCCccCCCCCccc----CCceEeCCCC
Confidence            446889999988  56653 34322  5555555555554            22446677777777    2257777777


Q ss_pred             eeC
Q psy5614          81 IGD   83 (98)
Q Consensus        81 ~G~   83 (98)
                      +|+
T Consensus       336 ~G~  338 (525)
T KOG1225|consen  336 TGE  338 (525)
T ss_pred             cCC
Confidence            775

>PF06247 Plasmod_Pvs28: Plasmodium ookinete surface protein Pvs28; InterPro: IPR010423 This family consists of several ookinete surface protein (Pvs28) from several species of Plasmodium

Probab=97.37  E-value=0.00041  Score=48.86  Aligned_cols=82  Identities=30%  Similarity=0.703  Sum_probs=51.0

Q ss_pred             ccCCcEEe-cC-----CCCeEEcCCCcEeCCCCCcc-cCcCCCCCCCC-----------cee---------eCCeec---
Q psy5614           3 WLMWIQCS-MQ-----SNPSCSCLPNYIGAPPNCRP-ECVMNSECASN-----------LAC---------INEKCR---   52 (98)
Q Consensus         3 ~~~~a~C~-~~-----g~~~C~C~~Gy~Gdg~~C~~-eC~~~~~C~~~-----------~~C---------~~~~C~---   52 (98)
                      |...|+|+ ..     ..|.|.|.+||+-....|.+ +|.. ..|...           ..|         .+.+|+   
T Consensus        52 Cgdya~C~~~~~~~~~~~~~C~C~~gY~~~~~vCvp~~C~~-~~Cg~GKCI~d~~~~~~~~CSC~IGkV~~dn~kCtk~G  130 (197)
T PF06247_consen   52 CGDYAKCINQANKGEERAYKCDCINGYILKQGVCVPNKCNN-KDCGSGKCILDPDNPNNPTCSCNIGKVPDDNKKCTKTG  130 (197)
T ss_dssp             EETTEEEEE-SSTTSSTSEEEEE-TTEEESSSSEEEGGGSS----TTEEEEEEEGGGSEEEEEE-TEEETTTTTESEEEE
T ss_pred             ccchhhhhcCCCcccceeEEEecccCceeeCCeEchhhcCc-eecCCCeEEecCCCCCCceeEeeeceEeccCCcccCCC
Confidence            67889998 33     68999999999876567774 5643 345421           123         135666   


Q ss_pred             -CCCCCCCCCCCeeEecCCccEEeCCCCCeeCCC
Q psy5614          53 -DPCPGSCGYNAQCKVINHTPICTCPEGYIGDPF   85 (98)
Q Consensus        53 -d~C~~~C~~~a~C~~~~g~~~C~C~~Gy~G~g~   85 (98)
                       .+|+--|..+..|..+.+-|+|.|++||.+++-
T Consensus       131 ~T~C~LKCk~nE~CK~~~~~Y~C~~~~~~~~~~~  164 (197)
T PF06247_consen  131 ETKCSLKCKENEECKLVDGYYKCVCKEGFPGDGE  164 (197)
T ss_dssp             --------TTTEEEEEETTEEEEEE-TT-EEETT
T ss_pred             ccceeeecCCCcceeeeCcEEEeecCCCCCCCCC
Confidence             567667899999999999999999999987764

Pvs25 and Pvs28 are expressed on the surface of ookinetes. These proteins are potential candidates for vaccine and induce antibodies that block the infectivity of Plasmodium vivax in immunised animals [].; GO: 0009986 cell surface, 0016020 membrane; PDB: 1Z3G_B 1Z1Y_B 1Z27_A.

>PF12662 cEGF: Complement Clr-like EGF-like

Probab=97.29  E-value=0.00022  Score=34.29  Aligned_cols=21  Identities=38%  Similarity=0.738  Sum_probs=17.7

Q ss_pred             ccEEeCCCCCe--eCCCCCCccCC
Q psy5614          71 TPICTCPEGYI--GDPFSSCFPKP   92 (98)
Q Consensus        71 ~~~C~C~~Gy~--G~g~~~C~~~~   92 (98)
                      +|+|+|++||+  .|+. .|+.++
T Consensus         1 sy~C~C~~Gy~l~~d~~-~C~DId   23 (24)
T PF12662_consen    1 SYTCSCPPGYQLSPDGR-SCEDID   23 (24)
T ss_pred             CEEeeCCCCCcCCCCCC-ccccCC
Confidence            69999999998  6776 798875

>PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins

Probab=97.28  E-value=0.00015  Score=38.94  Aligned_cols=24  Identities=29%  Similarity=0.433  Sum_probs=21.7

Q ss_pred             CccCCcEEe-cCCCCeEEcCCCcEe
Q psy5614           2 SWLMWIQCS-MQSNPSCSCLPNYIG   25 (98)
Q Consensus         2 ~~~~~a~C~-~~g~~~C~C~~Gy~G   25 (98)
                      .|..++.|+ +.|+|+|.|++||..
T Consensus        11 ~C~~~~~C~N~~Gsy~C~C~~Gy~~   35 (42)
T PF07645_consen   11 NCPENGTCVNTEGSYSCSCPPGYEL   35 (42)
T ss_dssp             SSSTTSEEEEETTEEEEEESTTEEE
T ss_pred             cCCCCCEEEcCCCCEEeeCCCCcEE
Confidence            377899999 999999999999984

Many of these proteins require calcium for their biological function and a calcium-binding site has been found at the N terminus of some EGF-like domains []. Calcium-binding may be crucial for numerous protein-protein interactions. For human coagulation factor IX it has been shown [] that the calcium-ligands form a pentagonal bipyramid. The first, third and fourth conserved negatively charged or polar residues are side chain ligands. The latter is possibly hydroxylated (see aspartic acid and asparagine hydroxylation site) []. A conserved aromatic residue, as well as the second conserved negative residue, are thought to be involved in stabilising the calcium-binding site. As in non-calcium binding EGF-like domains, there are six conserved cysteines and the structure of both types is very similar as calcium-binding induces only strictly local structural changes []. +------------------+ +---------+ | | | | nxnnC-x(3,14)-C-x(3,7)-CxxbxxxxaxC-x(1,6)-C-x(8,13)-Cx | | +------------------+ 'n': negatively charged or polar residue [DEQN] 'b': possibly beta-hydroxylated residue [DN] 'a': aromatic amino acid 'C': cysteine, involved in disulphide bond 'x': any amino acid. ; GO: 0005509 calcium ion binding; PDB: 2VJ3_A 1TOZ_A 1LMJ_A 1UZQ_A 1UZK_A 1UZJ_B 1UZP_A 1EMO_A 1EMN_A 2RR0_A ....

>smart00179 EGF_CA Calcium-binding EGF-like domain

Probab=97.17  E-value=0.00051  Score=35.25  Aligned_cols=27  Identities=26%  Similarity=0.515  Sum_probs=22.6

Q ss_pred             ccCCcEEe-cCCCCeEEcCCCcEeCCCCC
Q psy5614           3 WLMWIQCS-MQSNPSCSCLPNYIGAPPNC   30 (98)
Q Consensus         3 ~~~~a~C~-~~g~~~C~C~~Gy~Gdg~~C   30 (98)
                      |..++.|+ ..++|.|.|++||+ +|..|
T Consensus        11 C~~~~~C~~~~g~~~C~C~~g~~-~g~~C   38 (39)
T smart00179       11 CQNGGTCVNTVGSYRCECPPGYT-DGRNC   38 (39)
T ss_pred             cCCCCEeECCCCCeEeECCCCCc-cCCcC
Confidence            67788999 99999999999999 33555

>PF12946 EGF_MSP1_1: MSP1 EGF domain 1; InterPro: IPR024730 This EGF-like domain is found at the C terminus of the malaria parasite MSP1 protein

Probab=96.95  E-value=0.00039  Score=36.76  Aligned_cols=29  Identities=21%  Similarity=0.426  Sum_probs=21.6

Q ss_pred             CccCCcEEe--cCCCCeEEcCCCcEeCCCCC
Q psy5614           2 SWLMWIQCS--MQSNPSCSCLPNYIGAPPNC   30 (98)
Q Consensus         2 ~~~~~a~C~--~~g~~~C~C~~Gy~Gdg~~C   30 (98)
                      .|..||.|+  .+|++.|.|+.||..++..|
T Consensus         6 ~cP~NA~C~~~~dG~eecrCllgyk~~~~~C   36 (37)
T PF12946_consen    6 KCPANAGCFRYDDGSEECRCLLGYKKVGGKC   36 (37)
T ss_dssp             ---TTEEEEEETTSEEEEEE-TTEEEETTEE
T ss_pred             cCCCCcccEEcCCCCEEEEeeCCccccCCCc
Confidence            478999999  56999999999998876554

MSP1 is the merozoite surface protein 1. This domain is part of the C-terminal fragment that is proteolytically processed from the the rest of the protein and is left attached to the surface of the invading parasite [].; PDB: 1N1I_C 2FLG_A 1CEJ_A 2NPR_A 1B9W_A 1OB1_F.

>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium

Probab=96.94  E-value=0.001  Score=33.01  Aligned_cols=25  Identities=24%  Similarity=0.474  Sum_probs=21.9

Q ss_pred             CccCCcEEe-cCCCCeEEcCCCcEeC
Q psy5614           2 SWLMWIQCS-MQSNPSCSCLPNYIGA   26 (98)
Q Consensus         2 ~~~~~a~C~-~~g~~~C~C~~Gy~Gd   26 (98)
                      .|..++.|+ ..+.|+|.|+.||.|+
T Consensus         7 ~C~~~~~C~~~~~~~~C~C~~g~~g~   32 (36)
T cd00053           7 PCSNGGTCVNTPGSYRCVCPPGYTGD   32 (36)
T ss_pred             CCCCCCEEecCCCCeEeECCCCCccc
Confidence            366789999 8889999999999985

>KOG1217|consensus

Probab=96.93  E-value=0.0034  Score=47.24  Aligned_cols=81  Identities=26%  Similarity=0.684  Sum_probs=57.3

Q ss_pred             ccCCcEEe-cCCCCeEEcCCCcEeCCC-CCc--ccCc---CCCCCCCCcee-----------------eCCeec---CCC
Q psy5614           3 WLMWIQCS-MQSNPSCSCLPNYIGAPP-NCR--PECV---MNSECASNLAC-----------------INEKCR---DPC   55 (98)
Q Consensus         3 ~~~~a~C~-~~g~~~C~C~~Gy~Gdg~-~C~--~eC~---~~~~C~~~~~C-----------------~~~~C~---d~C   55 (98)
                      |..+++|+ ..+.|.|.|++||.|..- .+.  .+|.   ....|....+|                 .+..|+   ++|
T Consensus       280 c~~~~~C~~~~~~~~C~C~~g~~g~~~~~~~~~~~C~~~~~~~~c~~g~~C~~~~~~~~~~C~c~~~~~g~~C~~~~~~C  359 (487)
T KOG1217|consen  280 CPNGGTCVNVPGSYRCTCPPGFTGRLCTECVDVDECSPRNAGGPCANGGTCNTLGSFGGFRCACGPGFTGRRCEDSNDEC  359 (487)
T ss_pred             cCCCCeeecCCCcceeeCCCCCCCCCCccccccccccccccCCcCCCCcccccCCCCCCCCcCCCCCCCCCccccCCccc
Confidence            67788999 777799999999999553 232  2443   12224443333                 235666   268


Q ss_pred             C-CCCCCCCeeEe-cCCccEEeCCCCCeeC
Q psy5614          56 P-GSCGYNAQCKV-INHTPICTCPEGYIGD   83 (98)
Q Consensus        56 ~-~~C~~~a~C~~-~~g~~~C~C~~Gy~G~   83 (98)
                      . .++..++.|++ ..++|+|.|+.+|.+.
T Consensus       360 ~~~~~~~~~~c~~~~~~~~~c~~~~~~~~~  389 (487)
T KOG1217|consen  360 ASSPCCPGGTCVNETPGSYRCACPAGFAGK  389 (487)
T ss_pred             cCCccccCCEeccCCCCCeEecCCCccccC
Confidence            5 56889999999 7889999999999873

>KOG1217|consensus

Probab=96.91  E-value=0.0015  Score=49.20  Aligned_cols=60  Identities=28%  Similarity=0.658  Sum_probs=41.8

Q ss_pred             cEEe-cCCCCeEEcCCCcEeCC-CCCcccCcCCCCCCCCceeeCCeecCCCC-C-CCCCCCeeEecCCccEEeCCCCCee
Q psy5614           7 IQCS-MQSNPSCSCLPNYIGAP-PNCRPECVMNSECASNLACINEKCRDPCP-G-SCGYNAQCKVINHTPICTCPEGYIG   82 (98)
Q Consensus         7 a~C~-~~g~~~C~C~~Gy~Gdg-~~C~~eC~~~~~C~~~~~C~~~~C~d~C~-~-~C~~~a~C~~~~g~~~C~C~~Gy~G   82 (98)
                      ++|+ ..++|+|.|++||+++. ..+.+    .               ++|. . .|.++++|++..+.|+|.|++||+|
T Consensus       243 ~~c~~~~~~~~C~~~~g~~~~~~~~~~~----~---------------~~C~~~~~c~~~~~C~~~~~~~~C~C~~g~~g  303 (487)
T KOG1217|consen  243 GTCVNTVGSYTCRCPEGYTGDACVTCVD----V---------------DSCALIASCPNGGTCVNVPGSYRCTCPPGFTG  303 (487)
T ss_pred             CcccccCCceeeeCCCCccccccceeee----c---------------cccCCCCccCCCCeeecCCCcceeeCCCCCCC
Confidence            5566 66667777777777743 12211    0               3442 2 3888999999999999999999999


Q ss_pred             CCC
Q psy5614          83 DPF   85 (98)
Q Consensus        83 ~g~   85 (98)
                      ...
T Consensus       304 ~~~  306 (487)
T KOG1217|consen  304 RLC  306 (487)
T ss_pred             CCC
Confidence            764

>smart00181 EGF Epidermal growth factor-like domain

Probab=96.66  E-value=0.0023  Score=32.27  Aligned_cols=24  Identities=29%  Similarity=0.613  Sum_probs=20.9

Q ss_pred             CccCCcEEe-cCCCCeEEcCCCcEeC
Q psy5614           2 SWLMWIQCS-MQSNPSCSCLPNYIGA   26 (98)
Q Consensus         2 ~~~~~a~C~-~~g~~~C~C~~Gy~Gd   26 (98)
                      .|..+ +|+ ..++|+|.|++||.|+
T Consensus         7 ~C~~~-~C~~~~~~~~C~C~~g~~g~   31 (35)
T smart00181        7 PCSNG-TCINTPGSYTCSCPPGYTGD   31 (35)
T ss_pred             CCCCC-EEECCCCCeEeECCCCCccC
Confidence            36677 899 8899999999999985

>cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

Probab=96.53  E-value=0.0029  Score=31.78  Aligned_cols=23  Identities=30%  Similarity=0.548  Sum_probs=20.7

Q ss_pred             ccCCcEEe-cCCCCeEEcCCCcEe
Q psy5614           3 WLMWIQCS-MQSNPSCSCLPNYIG   25 (98)
Q Consensus         3 ~~~~a~C~-~~g~~~C~C~~Gy~G   25 (98)
                      |..++.|+ ..+.|+|.|++||+|
T Consensus        11 C~~~~~C~~~~~~~~C~C~~g~~g   34 (38)
T cd00054          11 CQNGGTCVNTVGSYRCSCPPGYTG   34 (38)
T ss_pred             cCCCCEeECCCCCeEeECCCCCcC
Confidence            66788999 888999999999998

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.

>PF12946 EGF_MSP1_1: MSP1 EGF domain 1; InterPro: IPR024730 This EGF-like domain is found at the C terminus of the malaria parasite MSP1 protein

Probab=96.51  E-value=0.0011  Score=35.10  Aligned_cols=31  Identities=29%  Similarity=0.509  Sum_probs=23.1

Q ss_pred             CCCCCCCeeEecC-CccEEeCCCCCeeCCCCCC
Q psy5614          57 GSCGYNAQCKVIN-HTPICTCPEGYIGDPFSSC   88 (98)
Q Consensus        57 ~~C~~~a~C~~~~-g~~~C~C~~Gy~G~g~~~C   88 (98)
                      ..|..||.|++.. |++.|.|..||..++. .|
T Consensus         5 ~~cP~NA~C~~~~dG~eecrCllgyk~~~~-~C   36 (37)
T PF12946_consen    5 TKCPANAGCFRYDDGSEECRCLLGYKKVGG-KC   36 (37)
T ss_dssp             S---TTEEEEEETTSEEEEEE-TTEEEETT-EE
T ss_pred             ccCCCCcccEEcCCCCEEEEeeCCccccCC-Cc
Confidence            4789999999976 8999999999998875 45

MSP1 is the merozoite surface protein 1. This domain is part of the C-terminal fragment that is proteolytically processed from the the rest of the protein and is left attached to the surface of the invading parasite [].; PDB: 1N1I_C 2FLG_A 1CEJ_A 2NPR_A 1B9W_A 1OB1_F.

>PF12662 cEGF: Complement Clr-like EGF-like

Probab=96.40  E-value=0.0023  Score=30.76  Aligned_cols=19  Identities=32%  Similarity=0.768  Sum_probs=15.1

Q ss_pred             CCeEEcCCCcE--eCCCCCcc
Q psy5614          14 NPSCSCLPNYI--GAPPNCRP   32 (98)
Q Consensus        14 ~~~C~C~~Gy~--Gdg~~C~~   32 (98)
                      +|+|.|++||.  .|+..|.+
T Consensus         1 sy~C~C~~Gy~l~~d~~~C~D   21 (24)
T PF12662_consen    1 SYTCSCPPGYQLSPDGRSCED   21 (24)
T ss_pred             CEEeeCCCCCcCCCCCCcccc
Confidence            58999999997  56667753

>PF14670 FXa_inhibition: Coagulation Factor Xa inhibitory site; PDB: 3Q3K_B 1NFY_B 1LQD_A 1G2L_B 1IQF_L 2UWP_B 2VH6_B 3KQC_L 2P93_L 2BQW_A

Probab=96.19  E-value=0.0045  Score=32.42  Aligned_cols=20  Identities=30%  Similarity=0.625  Sum_probs=17.0

Q ss_pred             CeeEecCCccEEeCCCCCee
Q psy5614          63 AQCKVINHTPICTCPEGYIG   82 (98)
Q Consensus        63 a~C~~~~g~~~C~C~~Gy~G   82 (98)
                      -.|++++++|+|.|++||+-
T Consensus        10 h~C~~~~g~~~C~C~~Gy~L   29 (36)
T PF14670_consen   10 HICVNTPGSYRCSCPPGYKL   29 (36)
T ss_dssp             SEEEEETTSEEEE-STTEEE
T ss_pred             CCCccCCCceEeECCCCCEE
Confidence            37999999999999999974

...

>KOG1225|consensus

Probab=96.13  E-value=0.015  Score=46.62  Aligned_cols=60  Identities=32%  Similarity=0.895  Sum_probs=42.8

Q ss_pred             eEEcCCCcEeCCCCCcc-cCcCCCCCCCCceeeCCeec-------CCCC-CCCCCCCeeEecCCccEEeCCCCCeeCC
Q psy5614          16 SCSCLPNYIGAPPNCRP-ECVMNSECASNLACINEKCR-------DPCP-GSCGYNAQCKVINHTPICTCPEGYIGDP   84 (98)
Q Consensus        16 ~C~C~~Gy~Gdg~~C~~-eC~~~~~C~~~~~C~~~~C~-------d~C~-~~C~~~a~C~~~~g~~~C~C~~Gy~G~g   84 (98)
                      .|.|++||.|  ..|+. +|.  ++|..++.|+..+|.       ..|. ..|..+..|++.     |+|+.||.|..
T Consensus       297 ~CiC~~g~~G--~dCs~~~cp--adC~g~G~Ci~G~C~C~~Gy~G~~C~~~~C~~~g~cv~g-----C~C~~Gw~G~d  365 (525)
T KOG1225|consen  297 ECICNPGYSG--KDCSIRRCP--ADCSGHGKCIDGECLCDEGYTGELCIQRACSGGGQCVNG-----CKCKKGWRGPD  365 (525)
T ss_pred             EeecCCCccc--cccccccCC--ccCCCCCcccCCceEeCCCCcCCcccccccCCCceeccC-----ceeccCccCCC
Confidence            7999999999  66652 343  567777888877776       3353 236666666532     99999999976

>PF07974 EGF_2: EGF-like domain; InterPro: IPR013111 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=96.09  E-value=0.0071  Score=30.83  Aligned_cols=24  Identities=29%  Similarity=0.718  Sum_probs=20.5

Q ss_pred             CCCCCCeeEecCCccEEeCCCCCeeC
Q psy5614          58 SCGYNAQCKVINHTPICTCPEGYIGD   83 (98)
Q Consensus        58 ~C~~~a~C~~~~g~~~C~C~~Gy~G~   83 (98)
                      .|..+++|+..  ..+|+|.+||+|+
T Consensus         7 ~C~~~G~C~~~--~g~C~C~~g~~G~   30 (32)
T PF07974_consen    7 ICSGHGTCVSP--CGRCVCDSGYTGP   30 (32)
T ss_pred             ccCCCCEEeCC--CCEEECCCCCcCC
Confidence            58889999876  4689999999996

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length. This entry contains EGF domains found in a variety of extracellular and membrane proteins

>KOG1219|consensus

Probab=96.08  E-value=0.0088  Score=55.02  Aligned_cols=36  Identities=31%  Similarity=0.944  Sum_probs=32.2

Q ss_pred             CCeec---CCCC-CCCCCCCeeEecCCccEEeCCCCCeeC
Q psy5614          48 NEKCR---DPCP-GSCGYNAQCKVINHTPICTCPEGYIGD   83 (98)
Q Consensus        48 ~~~C~---d~C~-~~C~~~a~C~~~~g~~~C~C~~Gy~G~   83 (98)
                      +..|+   .+|. +||..+++|+...+.|.|.|+.||+|+
T Consensus      3896 G~~CEi~~epC~snPC~~GgtCip~~n~f~CnC~~gyTG~ 3935 (4289)
T KOG1219|consen 3896 GNHCEIDLEPCASNPCLTGGTCIPFYNGFLCNCPNGYTGK 3935 (4289)
T ss_pred             CcccccccccccCCCCCCCCEEEecCCCeeEeCCCCccCc
Confidence            45777   6785 899999999999999999999999995

>PF12661 hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E26_A 3A7Q_A 2YGP_A 2YGO_A 1HRE_A 1HAE_A 1HAF_A 1HRF_A

Probab=95.53  E-value=0.0092  Score=24.57  Aligned_cols=10  Identities=40%  Similarity=1.348  Sum_probs=8.2

Q ss_pred             eEEcCCCcEe
Q psy5614          16 SCSCLPNYIG   25 (98)
Q Consensus        16 ~C~C~~Gy~G   25 (98)
                      +|+|++||+|
T Consensus         1 ~C~C~~G~~G   10 (13)
T PF12661_consen    1 TCQCPPGWTG   10 (13)
T ss_dssp             EEEE-TTEET
T ss_pred             CccCcCCCcC
Confidence            5899999999

>PF06247 Plasmod_Pvs28: Plasmodium ookinete surface protein Pvs28; InterPro: IPR010423 This family consists of several ookinete surface protein (Pvs28) from several species of Plasmodium

Probab=95.17  E-value=0.011  Score=41.80  Aligned_cols=69  Identities=25%  Similarity=0.507  Sum_probs=44.6

Q ss_pred             CcEEe-cCCCCeEEcCCCcEe-CCCCCcc--cCcC-CCCCCCCceeeCCeecCCCCCCCCCCCeeEecC-----CccEEe
Q psy5614           6 WIQCS-MQSNPSCSCLPNYIG-APPNCRP--ECVM-NSECASNLACINEKCRDPCPGSCGYNAQCKVIN-----HTPICT   75 (98)
Q Consensus         6 ~a~C~-~~g~~~C~C~~Gy~G-dg~~C~~--eC~~-~~~C~~~~~C~~~~C~d~C~~~C~~~a~C~~~~-----g~~~C~   75 (98)
                      |+.-+ +.+.|.|.|.+||.= +-..|++  +|.. ..     .           ..+|++.|.|++..     ..|+|.
T Consensus        10 NG~LiQMSNHfEC~Cnegfvl~~EntCE~kv~C~~~e~-----~-----------~K~Cgdya~C~~~~~~~~~~~~~C~   73 (197)
T PF06247_consen   10 NGYLIQMSNHFECKCNEGFVLKNENTCEEKVECDKLEN-----V-----------NKPCGDYAKCINQANKGEERAYKCD   73 (197)
T ss_dssp             TEEEEEESSEEEEEESTTEEEEETTEEEE----SG-GG-----T-----------TSEEETTEEEEE-SSTTSSTSEEEE
T ss_pred             CCEEEEccCceEEEcCCCcEEccccccccceecCcccc-----c-----------CccccchhhhhcCCCcccceeEEEe
Confidence            45556 778999999999964 1123432  2322 00     0           15899999999965     489999


Q ss_pred             CCCCCeeCCCCCCccC
Q psy5614          76 CPEGYIGDPFSSCFPK   91 (98)
Q Consensus        76 C~~Gy~G~g~~~C~~~   91 (98)
                      |.+||+-..- .|+|.
T Consensus        74 C~~gY~~~~~-vCvp~   88 (197)
T PF06247_consen   74 CINGYILKQG-VCVPN   88 (197)
T ss_dssp             E-TTEEESSS-SEEEG
T ss_pred             cccCceeeCC-eEchh
Confidence            9999987654 57653

Pvs25 and Pvs28 are expressed on the surface of ookinetes. These proteins are potential candidates for vaccine and induce antibodies that block the infectivity of Plasmodium vivax in immunised animals [].; GO: 0009986 cell surface, 0016020 membrane; PDB: 1Z3G_B 1Z1Y_B 1Z27_A.

>KOG4260|consensus

Probab=95.01  E-value=0.016  Score=43.32  Aligned_cols=57  Identities=23%  Similarity=0.420  Sum_probs=42.7

Q ss_pred             ccCCcEEe-cCCCCeEEcCCCcEeCCCCCcccCcCCCCCCCCceeeCCeecCCCCCCC-CCCCeeEecCCccEEeCCCCC
Q psy5614           3 WLMWIQCS-MQSNPSCSCLPNYIGAPPNCRPECVMNSECASNLACINEKCRDPCPGSC-GYNAQCKVINHTPICTCPEGY   80 (98)
Q Consensus         3 ~~~~a~C~-~~g~~~C~C~~Gy~Gdg~~C~~eC~~~~~C~~~~~C~~~~C~d~C~~~C-~~~a~C~~~~g~~~C~C~~Gy   80 (98)
                      |.++..|+ +.|+|+|..++||.++    .++|+.-                  ...| ..+..|.++.++|+|+|..|+
T Consensus       246 c~~~qfCvNteGSf~C~dk~Gy~~g----~d~C~~~------------------~d~~~~kn~~c~ni~~~~r~v~f~~~  303 (350)
T KOG4260|consen  246 CKAHQFCVNTEGSFKCEDKEGYKKG----VDECQFC------------------ADVCASKNRPCMNIDGQYRCVCFSGL  303 (350)
T ss_pred             CChhheeecCCCceEecccccccCC----hHHhhhh------------------hhhcccCCCCcccCCccEEEEecccc
Confidence            56778899 9999999999999883    3344320                  0122 356788899999999999987


Q ss_pred             e
Q psy5614          81 I   81 (98)
Q Consensus        81 ~   81 (98)
                      .
T Consensus       304 ~  304 (350)
T KOG4260|consen  304 I  304 (350)
T ss_pred             e
Confidence            4

>PF07974 EGF_2: EGF-like domain; InterPro: IPR013111 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=94.67  E-value=0.043  Score=27.91  Aligned_cols=21  Identities=24%  Similarity=0.401  Sum_probs=18.3

Q ss_pred             ccCCcEEe-cCCCCeEEcCCCcEe
Q psy5614           3 WLMWIQCS-MQSNPSCSCLPNYIG   25 (98)
Q Consensus         3 ~~~~a~C~-~~g~~~C~C~~Gy~G   25 (98)
                      |..+++|+ .  ..+|+|.+||+|
T Consensus         8 C~~~G~C~~~--~g~C~C~~g~~G   29 (32)
T PF07974_consen    8 CSGHGTCVSP--CGRCVCDSGYTG   29 (32)
T ss_pred             cCCCCEEeCC--CCEEECCCCCcC
Confidence            77888897 5  678999999999

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length. This entry contains EGF domains found in a variety of extracellular and membrane proteins

>cd01475 vWA_Matrilin VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and matrix-matrix interactions thereby providing tissue integrity

Probab=93.91  E-value=0.064  Score=37.81  Aligned_cols=32  Identities=31%  Similarity=0.700  Sum_probs=24.5

Q ss_pred             eec--CCCC---CCCCCCCeeEecCCccEEeCCCCCeeC
Q psy5614          50 KCR--DPCP---GSCGYNAQCKVINHTPICTCPEGYIGD   83 (98)
Q Consensus        50 ~C~--d~C~---~~C~~~a~C~~~~g~~~C~C~~Gy~G~   83 (98)
                      .|.  ++|.   +.|.  ..|.++.|+|.|.|++||+..
T Consensus       183 ~C~~~~~C~~~~~~c~--~~C~~~~g~~~c~c~~g~~~~  219 (224)
T cd01475         183 ICVVPDLCATLSHVCQ--QVCISTPGSYLCACTEGYALL  219 (224)
T ss_pred             cCcCchhhcCCCCCcc--ceEEcCCCCEEeECCCCccCC
Confidence            454  5663   4564  579999999999999999753

Some members of the matrilin family are expressed specifically in developing cartilage rudiments. The matrilin family consists of at least four members. All the members of the matrilin family contain VWA domains, EGF-like domains and a heptad repeat coiled-coiled domain at the carboxy terminus which is responsible for the oligomerization of the matrilins. The VWA domains have been shown to be essential for matrilin network formation by interacting with matrix ligands.

>PF00954 S_locus_glycop: S-locus glycoprotein family; InterPro: IPR000858 In Brassicaceae, self-incompatible plants have a self/non-self recognition system, which involves the inability of flowering plants to achieve self-fertilisation

Probab=93.83  E-value=0.061  Score=34.11  Aligned_cols=29  Identities=41%  Similarity=1.012  Sum_probs=23.2

Q ss_pred             CCCC--CCCCCCCeeEecCCccEEeCCCCCee
Q psy5614          53 DPCP--GSCGYNAQCKVINHTPICTCPEGYIG   82 (98)
Q Consensus        53 d~C~--~~C~~~a~C~~~~g~~~C~C~~Gy~G   82 (98)
                      |.|.  +.|++++.|. ...+..|.|.+||.-
T Consensus        78 d~Cd~y~~CG~~g~C~-~~~~~~C~Cl~GF~P  108 (110)
T PF00954_consen   78 DQCDVYGFCGPNGICN-SNNSPKCSCLPGFEP  108 (110)
T ss_pred             cCCCCccccCCccEeC-CCCCCceECCCCcCC
Confidence            5674  7899999995 445778999999964

This is sporophytically controlled by multiple alleles at a single locus (S). There are a total of 50 different S alleles in Brassica oleracea. S-locus glycoproteins, as well as S-receptor kinases, are in linkage with the S-alleles []. Most of the proteins within this family contain apple-like domain (IPR003609 from INTERPRO), which is predicted to possess protein- and/or carbohydrate-binding functions.; GO: 0048544 recognition of pollen

>PF14670 FXa_inhibition: Coagulation Factor Xa inhibitory site; PDB: 3Q3K_B 1NFY_B 1LQD_A 1G2L_B 1IQF_L 2UWP_B 2VH6_B 3KQC_L 2P93_L 2BQW_A

Probab=93.16  E-value=0.083  Score=27.57  Aligned_cols=18  Identities=33%  Similarity=0.704  Sum_probs=14.8

Q ss_pred             EEe-cCCCCeEEcCCCcEe
Q psy5614           8 QCS-MQSNPSCSCLPNYIG   25 (98)
Q Consensus         8 ~C~-~~g~~~C~C~~Gy~G   25 (98)
                      .|+ ..++|+|.|++||+=
T Consensus        11 ~C~~~~g~~~C~C~~Gy~L   29 (36)
T PF14670_consen   11 ICVNTPGSYRCSCPPGYKL   29 (36)
T ss_dssp             EEEEETTSEEEE-STTEEE
T ss_pred             CCccCCCceEeECCCCCEE
Confidence            678 889999999999964

...

>KOG1226|consensus

Probab=93.12  E-value=0.26  Score=41.21  Aligned_cols=72  Identities=26%  Similarity=0.766  Sum_probs=45.5

Q ss_pred             EEecCCCCe---EEcCCCcEeCCCCCc--c----------cCcCC---CCCCCCceee---------------CCeec-C
Q psy5614           8 QCSMQSNPS---CSCLPNYIGAPPNCR--P----------ECVMN---SECASNLACI---------------NEKCR-D   53 (98)
Q Consensus         8 ~C~~~g~~~---C~C~~Gy~Gdg~~C~--~----------eC~~~---~~C~~~~~C~---------------~~~C~-d   53 (98)
                      .|..+|.+.   |.|.+||.|  ..|+  .          .|+..   ..|+..+.|.               +..|+ |
T Consensus       468 ~C~g~G~~~CG~C~C~~G~~G--~~CEC~~~~~ss~~~~~~Cr~~~~~~vCSgrG~C~CGqC~C~~~~~~~i~G~fCECD  545 (783)
T KOG1226|consen  468 LCHGNGTFVCGQCRCDEGWLG--KKCECSTDELSSSEEEDKCRENSDSPVCSGRGDCVCGQCVCHKPDNGKIYGKFCECD  545 (783)
T ss_pred             ccCCCCcEEecceecCCCCCC--CcccCCccccCcHhHHhhccCCCCCCCcCCCCcEeCCceEecCCCCCceeeeeeecc
Confidence            343345554   599999999  5554  1          25431   2577776552               34666 3


Q ss_pred             C--CC----CCCCCCCeeEecCCccEEeCCCCCeeCCC
Q psy5614          54 P--CP----GSCGYNAQCKVINHTPICTCPEGYIGDPF   85 (98)
Q Consensus        54 ~--C~----~~C~~~a~C~~~~g~~~C~C~~Gy~G~g~   85 (98)
                      .  |.    ..|..+++|.=    -+|+|.+||+|.-.
T Consensus       546 nfsC~r~~g~lC~g~G~C~C----G~CvC~~GwtG~~C  579 (783)
T KOG1226|consen  546 NFSCERHKGVLCGGHGRCEC----GRCVCNPGWTGSAC  579 (783)
T ss_pred             CcccccccCcccCCCCeEeC----CcEEcCCCCccCCC
Confidence            3  43    35888888763    36999999999764

>PF01683 EB: EB module; InterPro: IPR006149 The EB domain has no known function

Probab=91.76  E-value=0.77  Score=25.13  Aligned_cols=25  Identities=28%  Similarity=0.575  Sum_probs=18.1

Q ss_pred             CCCCCCCeeEecCCccEEeCCCCCeeCCC
Q psy5614          57 GSCGYNAQCKVINHTPICTCPEGYIGDPF   85 (98)
Q Consensus        57 ~~C~~~a~C~~~~g~~~C~C~~Gy~G~g~   85 (98)
                      ..|..++.|++    -+|+|++||+-.+.
T Consensus        26 ~qC~~~s~C~~----g~C~C~~g~~~~~~   50 (52)
T PF01683_consen   26 EQCIGGSVCVN----GRCQCPPGYVEVGG   50 (52)
T ss_pred             CCCCCcCEEcC----CEeECCCCCEecCC
Confidence            45667888853    37999999976543

It is found in several Caenorhabditis sp. and Drosophila sp. proteins. The domain contains 8 conserved cysteines that probably form four disulphide bridges and is found associated with kunitz domains IPR002223 from INTERPRO

>PHA02887 EGF-like protein; Provisional

Probab=88.38  E-value=0.51  Score=31.09  Aligned_cols=23  Identities=26%  Similarity=0.553  Sum_probs=19.2

Q ss_pred             CcEEe---cCCCCeEEcCCCcEeCCCCC
Q psy5614           6 WIQCS---MQSNPSCSCLPNYIGAPPNC   30 (98)
Q Consensus         6 ~a~C~---~~g~~~C~C~~Gy~Gdg~~C   30 (98)
                      |++|.   ......|.|..||+|  ..|
T Consensus        96 HG~C~yI~dL~epsCrC~~GYtG--~RC  121 (126)
T PHA02887         96 NGECMNIIDLDEKFCICNKGYTG--IRC  121 (126)
T ss_pred             CCEEEccccCCCceeECCCCccc--CCC
Confidence            78998   557899999999999  555

>smart00051 DSL delta serrate ligand

Probab=87.17  E-value=0.82  Score=26.60  Aligned_cols=22  Identities=27%  Similarity=0.406  Sum_probs=14.7

Q ss_pred             CCCCCeeEecCCccEEeCCCCCeeC
Q psy5614          59 CGYNAQCKVINHTPICTCPEGYIGD   83 (98)
Q Consensus        59 C~~~a~C~~~~g~~~C~C~~Gy~G~   83 (98)
                      ...+..|.. .|  .++|.+||+|+
T Consensus        40 ~~~~~~Cd~-~G--~~~C~~Gw~G~   61 (63)
T smart00051       40 FFGHYTCDE-NG--NKGCLEGWMGP   61 (63)
T ss_pred             ccCCccCCc-CC--CEecCCCCcCC
Confidence            345566643 23  47899999985

>PHA02887 EGF-like protein; Provisional

Probab=86.89  E-value=0.72  Score=30.39  Aligned_cols=26  Identities=35%  Similarity=0.761  Sum_probs=20.9

Q ss_pred             CCCCCCCeeEecCC--ccEEeCCCCCeeC
Q psy5614          57 GSCGYNAQCKVINH--TPICTCPEGYIGD   83 (98)
Q Consensus        57 ~~C~~~a~C~~~~g--~~~C~C~~Gy~G~   83 (98)
                      +-|- +++|.....  .+.|.|.+||+|.
T Consensus        92 ~YCi-HG~C~yI~dL~epsCrC~~GYtG~  119 (126)
T PHA02887         92 DFCI-NGECMNIIDLDEKFCICNKGYTGI  119 (126)
T ss_pred             CEee-CCEEEccccCCCceeECCCCcccC
Confidence            5666 679988654  7899999999994

>KOG0994|consensus

Probab=82.76  E-value=1.8  Score=38.48  Aligned_cols=21  Identities=38%  Similarity=0.906  Sum_probs=16.1

Q ss_pred             eEecCCccEE-eCCCCCeeCCC
Q psy5614          65 CKVINHTPIC-TCPEGYIGDPF   85 (98)
Q Consensus        65 C~~~~g~~~C-~C~~Gy~G~g~   85 (98)
                      |.....++.| .|..||.||..
T Consensus       878 CqD~T~G~~CdrCl~GyyGdP~  899 (1758)
T KOG0994|consen  878 CQDSTTGHSCDRCLDGYYGDPR  899 (1758)
T ss_pred             ccccccccchhhhhccccCCcc
Confidence            5555567777 89999999975

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	98
1oig_A	24	The Solution Structure Of The Dpy Module From The D		8e-05

>pdb|1OIG|A Chain A, The Solution Structure Of The Dpy Module From The Dumpy Protein Length = 24

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 18/24 (75%), Positives = 22/24 (91%)
Query: 31 RPECVMNSECASNLACINEKCRDP 54
          RPECV+NS+C SN AC+N+KCRDP
Sbjct: 1  RPECVLNSDCPSNQACVNQKCRDP 24

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	98
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	99.4
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	99.39
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	99.37
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	99.36
2bou_A	143	EGF-like module containing mucin-like hormone rece	99.34
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	99.3
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	99.27
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	99.22
2bou_A	143	EGF-like module containing mucin-like hormone rece	99.13
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	99.11
1aut_L	114	Activated protein C; serine proteinase, plasma cal	99.1
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	99.02
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	99.02
2vh0_B	134	Activated factor XA light chain; serine protease,	99.0
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	99.0
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	98.99
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	98.98
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	98.94
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	98.91
1ob1_C	99	Major merozoite surface protein; immune system, im	98.9
1n1i_A	105	Merozoite surface protein-1; MSP1, malaria, surfac	98.75
1tpg_A	91	T-plasminogen activator F1-G; plasminogen activati	98.73
4fbr_A	267	Lectin, myxobacterial hemagglutinin; beta-barrel,	98.71
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	98.71
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	98.67
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	98.65
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	98.51
1gl4_A	285	Nidogen-1, entactin; immunoglobulin-like domain, e	98.48
4fbr_A	267	Lectin, myxobacterial hemagglutinin; beta-barrel,	98.47
3v65_B	386	Low-density lipoprotein receptor-related protein;	98.46
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	98.44
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	98.37
3u7u_G	55	Neuregulin 1; signaling protein, transferase-trans	98.29
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	98.26
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	98.16
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	98.15
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	98.12
2k2s_B	61	Micronemal protein 6; microneme protein complex, c	98.11
1egf_A	53	Epidermal growth factor; NMR {Mus musculus} SCOP:	98.09
1a3p_A	45	Epidermal growth factor; disulfide connectivities,	98.08
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	98.07
2kl7_A	71	Fibulin-4; secreted, calcium, disease mutation, di	98.04
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	98.03
2jkh_L	55	Factor X light chain; plasma, calcium, zymogen, se	97.98
3ca7_A	52	Protein spitz; argos, EGF, developmental protein,	97.92
1hae_A	63	Heregulin-alpha; growth factor; NMR {Homo sapiens}	97.89
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	97.87
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	97.84
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	97.82
1aut_L	114	Activated protein C; serine proteinase, plasma cal	97.8
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	97.79
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	97.79
1b9w_A	95	Protein (merozoite surface protein 1); MSP-1, cand	97.78
1apq_A	53	Complement protease C1R; EGF, calcium binding, ser	97.75
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	97.73
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	97.71
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	97.66
1k36_A	46	Epiregulin; EGF-like fold, hormone/growth factor c	97.62
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	97.6
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	97.56
1gl4_A	285	Nidogen-1, entactin; immunoglobulin-like domain, e	97.51
2vh0_B	134	Activated factor XA light chain; serine protease,	97.48
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	97.46
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	97.44
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	97.44
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	97.42
1nql_B	53	Epidermal growth factor; cell surface receptor, ty	97.42
1g1s_A	162	P-selectin; selectin, lectin, EGF, sulphated, SLEX	97.39
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	97.23
1kig_L	51	Factor XA; glycoprotein, serine protease, plasma,	97.22
2p28_B	217	Integrin beta-2; hybrid domain, PSI domain, I-EGF	97.15
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	97.07
1ob1_C	99	Major merozoite surface protein; immune system, im	97.07
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	97.06
3u7u_G	55	Neuregulin 1; signaling protein, transferase-trans	97.05
1n1i_A	105	Merozoite surface protein-1; MSP1, malaria, surfac	97.02
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	96.91
2bz6_L	53	Blood coagulation factor VIIA; serine protease, en	96.91
1a3p_A	45	Epidermal growth factor; disulfide connectivities,	96.9
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	96.88
1kli_L	69	Factor VIIA; extrinsic coagulation pathway, serine	96.88
2wph_E	59	Coagulation factor IXA light chain; serine proteas	96.8
2k2s_B	61	Micronemal protein 6; microneme protein complex, c	96.79
3fby_A	551	COMP, cartilage oligomeric matrix protein; signatu	96.69
3ltf_D	58	Protein spitz; receptor-ligand complex ectodomain	96.68
1egf_A	53	Epidermal growth factor; NMR {Mus musculus} SCOP:	96.56
2kl7_A	71	Fibulin-4; secreted, calcium, disease mutation, di	96.55
1g1s_A	162	P-selectin; selectin, lectin, EGF, sulphated, SLEX	96.48
1nql_B	53	Epidermal growth factor; cell surface receptor, ty	96.42
1apq_A	53	Complement protease C1R; EGF, calcium binding, ser	96.41
1szb_A	170	Mannose binding lectin-associated serine protease-	96.37
1k36_A	46	Epiregulin; EGF-like fold, hormone/growth factor c	96.36
3zyj_B	426	Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA	96.35
1hae_A	63	Heregulin-alpha; growth factor; NMR {Homo sapiens}	96.24
1g1t_A	157	E-selectin; EGF, adhesion molecule, SLEX, immune s	96.22
3cfw_A	164	L-selectin; EGF, cell adhesion, EGF-like domain, g	96.21
2jkh_L	55	Factor X light chain; plasma, calcium, zymogen, se	96.2
1oig_A	26	Dumpy, CG33196-PB; structural protein; NMR {Drosop	96.18
1tpg_A	91	T-plasminogen activator F1-G; plasminogen activati	96.16
1q4g_A	553	Prostaglandin G/H synthase 1; cyclooxygenase, non-	96.14
3ca7_A	52	Protein spitz; argos, EGF, developmental protein,	96.04
3nt1_A	587	Prostaglandin-endoperoxide synthase 2; prostagland	95.97
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	95.89
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	95.83
4aqs_A	525	Laminin subunit beta-1; cell adhesion; HET: NAG BM	95.43
3e50_C	50	Protransforming growth factor alpha; IDE, TGF-alph	95.4
3v65_B	386	Low-density lipoprotein receptor-related protein;	95.27
3cfw_A	164	L-selectin; EGF, cell adhesion, EGF-like domain, g	95.02
3ltf_D	58	Protein spitz; receptor-ligand complex ectodomain	95.0
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	94.98
2fd6_A	122	Urokinase-type plasminogen activator; UPAR, ATF, A	94.92
3fby_A	551	COMP, cartilage oligomeric matrix protein; signatu	94.88
2bz6_L	53	Blood coagulation factor VIIA; serine protease, en	94.87
1nzi_A	159	Complement C1S component; calcium, innate immunity	94.86
1kig_L	51	Factor XA; glycoprotein, serine protease, plasma,	94.64
2rnl_A	50	Amphiregulin; AR, colorectum cell-derived growth f	94.6
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	94.58
1xdt_R	79	Hbegf, heparin-binding epidermal growth factor; co	93.79
1iox_A	50	Betacellulin; EGF-like fold, hormone/growth factor	93.68
1klo_A	162	Laminin; glycoprotein; 2.10A {Mus musculus} SCOP:	93.38
3asi_A	410	Neurexin-1-alpha; beta-sandwich, cell adhesion, sy	93.32
3e50_C	50	Protransforming growth factor alpha; IDE, TGF-alph	93.31
2wph_E	59	Coagulation factor IXA light chain; serine proteas	93.19
1kli_L	69	Factor VIIA; extrinsic coagulation pathway, serine	92.81
1iox_A	50	Betacellulin; EGF-like fold, hormone/growth factor	92.77
4aqs_A	525	Laminin subunit beta-1; cell adhesion; HET: NAG BM	92.7
2ygo_A	188	WIF-1, WNT inhibitory factor 1; signaling protein,	92.11
2rnl_A	50	Amphiregulin; AR, colorectum cell-derived growth f	91.95
1szb_A	170	Mannose binding lectin-associated serine protease-	91.82
1klo_A	162	Laminin; glycoprotein; 2.10A {Mus musculus} SCOP:	91.41
2fd6_A	122	Urokinase-type plasminogen activator; UPAR, ATF, A	91.2
2i9a_A	145	Urokinase-type plasminogen activator; growth facto	90.2
1xdt_R	79	Hbegf, heparin-binding epidermal growth factor; co	89.73
3f1s_B	283	Vitamin K-dependent protein Z; PZ, ZPI, complex, s	89.24
1nzi_A	159	Complement C1S component; calcium, innate immunity	88.51
3qcw_A	1245	Neurexin-1-alpha; synaptic adhesion molecule, cell	88.19
3qcw_A	1245	Neurexin-1-alpha; synaptic adhesion molecule, cell	86.99
3nt1_A	587	Prostaglandin-endoperoxide synthase 2; prostagland	86.7
1q4g_A	553	Prostaglandin G/H synthase 1; cyclooxygenase, non-	84.46
3fl7_A	536	Ephrin receptor; ATP-binding, kinase, nucleotide-b	83.35
1b9w_A	95	Protein (merozoite surface protein 1); MSP-1, cand	81.33
2i9a_A	145	Urokinase-type plasminogen activator; growth facto	81.14

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*

Probab=99.40  E-value=1.4e-12  Score=85.03  Aligned_cols=79  Identities=30%  Similarity=0.774  Sum_probs=63.5

Q ss_pred             CccCCcEEe-cCCCCeEEcCCCcEeCCCCCc---ccCcCCCCCCCCceee---------------CCeec---CCCC-CC
Q psy5614           2 SWLMWIQCS-MQSNPSCSCLPNYIGAPPNCR---PECVMNSECASNLACI---------------NEKCR---DPCP-GS   58 (98)
Q Consensus         2 ~~~~~a~C~-~~g~~~C~C~~Gy~Gdg~~C~---~eC~~~~~C~~~~~C~---------------~~~C~---d~C~-~~   58 (98)
                      .|..+++|+ ..++|+|+|++||+|  ..|+   ++|.. .+|..+++|+               +..|+   ++|. .+
T Consensus        14 ~C~~~g~C~~~~g~~~C~C~~Gy~G--~~C~~~~~~C~~-~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~~~C~~~~   90 (135)
T 2vj3_A           14 PCEHAGKCINTLGSFECQCLQGYTG--PRCEIDVNECVS-NPCQNDATCLDQIGEFQCICMPGYEGVHCEVNTDECASSP   90 (135)
T ss_dssp             SSSTTCEEEECSSSEEEECCTTEES--TTSCEECCTTTT-CCCCSSCEEEECSSCEEEECCTTEESSSSCEECCTTTTCC
T ss_pred             CCCCCCEeECCCCCEEEECCCCCcC--CcccccCccCCC-CCCCCCCEEeCCCCCceeeCCCCCcCCcceecCCcccCCC
Confidence            377899999 999999999999998  5675   36653 3566665553               34564   7785 89


Q ss_pred             CCCCCeeEecCCccEEeCCCCCeeC
Q psy5614          59 CGYNAQCKVINHTPICTCPEGYIGD   83 (98)
Q Consensus        59 C~~~a~C~~~~g~~~C~C~~Gy~G~   83 (98)
                      |.++++|+++.++|+|.|++||+|+
T Consensus        91 C~~~g~C~~~~g~~~C~C~~G~~G~  115 (135)
T 2vj3_A           91 CLHNGRCLDKINEFQCECPTGFTGH  115 (135)
T ss_dssp             STTTCEEEECSSCEEEECCTTEESS
T ss_pred             cCCCCEeECCCCCeEEECCCCCcCC
Confidence            9999999999999999999999985

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A

Probab=99.39  E-value=5.2e-13  Score=80.76  Aligned_cols=63  Identities=33%  Similarity=0.713  Sum_probs=51.6

Q ss_pred             CcEEe-cCCCCeEEcCCCcEeCCCCCcc--cCcCCCCCCCCceeeCCeecCCCCCCCCCCCeeEecCCccEEeCCCCCee
Q psy5614           6 WIQCS-MQSNPSCSCLPNYIGAPPNCRP--ECVMNSECASNLACINEKCRDPCPGSCGYNAQCKVINHTPICTCPEGYIG   82 (98)
Q Consensus         6 ~a~C~-~~g~~~C~C~~Gy~Gdg~~C~~--eC~~~~~C~~~~~C~~~~C~d~C~~~C~~~a~C~~~~g~~~C~C~~Gy~G   82 (98)
                      +++|+ +.++|+|.|++||+++|..|++  ||...                   ++|.+ ++|+++.++|+|.|++||+|
T Consensus        16 ~g~C~n~~g~y~C~C~~Gy~~~g~~C~dideC~~~-------------------~~C~~-~~C~n~~g~y~C~C~~G~~g   75 (82)
T 1emn_A           16 HGQCINTDGSYRCECPFGYILAGNECVDTDECSVG-------------------NPCGN-GTCKNVIGGFECTCEEGFEP   75 (82)
T ss_dssp             SSEECCCSSCCCEECCTTEEEETTEEEECCGGGTC-------------------CTTSS-SCEEECSSSEEECCSSSSCC
T ss_pred             CCEEEecCCCEEEECCCCeECCCCccCCcccccCC-------------------CCCCC-CEeECCCCCEEeECCCCeEe
Confidence            68999 9999999999999987788863  55421                   47874 79999999999999999999


Q ss_pred             CCCCCC
Q psy5614          83 DPFSSC   88 (98)
Q Consensus        83 ~g~~~C   88 (98)
                      ++...|
T Consensus        76 ~~~~~C   81 (82)
T 1emn_A           76 GPMMTC   81 (82)
T ss_dssp             CSSSCC
T ss_pred             CCCCcc
Confidence            875344

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}

Probab=99.37  E-value=2.2e-12  Score=84.17  Aligned_cols=81  Identities=22%  Similarity=0.573  Sum_probs=59.9

Q ss_pred             CccCCcEEe-cC--CCCeEEcCCCcEeCCCCCcc---------------cCcCCCCCCCCceee----------------
Q psy5614           2 SWLMWIQCS-MQ--SNPSCSCLPNYIGAPPNCRP---------------ECVMNSECASNLACI----------------   47 (98)
Q Consensus         2 ~~~~~a~C~-~~--g~~~C~C~~Gy~Gdg~~C~~---------------eC~~~~~C~~~~~C~----------------   47 (98)
                      .|..+++|+ ..  ++|+|.|++||+|  ..|+.               +|.. .+|.++++|+                
T Consensus         7 pC~~~g~C~~~~~~g~~~C~C~~G~~G--~~C~~~~~~~~~~~~c~~~~~C~~-~~C~~~g~C~~~~~~~~~~~~~~~C~   83 (143)
T 4d90_A            7 PCENGGICLPGLADGSFSCECPDGFTD--PNCSSVVEVASDEEEPTSAGPCTP-NPCHNGGTCEISEAYRGDTFIGYVCK   83 (143)
T ss_dssp             CCGGGCEEEC-----CCEEECCTTCCT--TTTCSCCCCTTTTTSCCCCCTTSS-CCCCTTCEEEECCCEETTEECCEEEE
T ss_pred             cCCCCCEeeCCCCCCCEEeECCCCCCC--CCCccCccccccccccccCCcCCC-CCCCCCCEecCCCccccCCCCCeEeE
Confidence            377889999 44  6899999999998  45542               2322 2355555554                


Q ss_pred             ------CCeec---CCCC-CCCCCCCeeEecCCccEEeCCCCCeeCCC
Q psy5614          48 ------NEKCR---DPCP-GSCGYNAQCKVINHTPICTCPEGYIGDPF   85 (98)
Q Consensus        48 ------~~~C~---d~C~-~~C~~~a~C~~~~g~~~C~C~~Gy~G~g~   85 (98)
                            +..|+   |+|. .+|.++++|+++.++|+|.|++||+|+..
T Consensus        84 C~~G~~G~~C~~~i~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~c  131 (143)
T 4d90_A           84 CPRGFNGIHCQHNINECEVEPCKNGGICTDLVANYSCECPGEFMGRNC  131 (143)
T ss_dssp             CCTTEESTTSCEECCTTTTCCSCTTCEEEEETTEEEEECCTTCBSTTS
T ss_pred             CcCCCcCCCcccCCCcCCCCCCCCCCEeECCCCCeEeECCCCCccCCc
Confidence                  33564   7885 89999999999999999999999999865

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A

Probab=99.36  E-value=1.4e-12  Score=88.89  Aligned_cols=82  Identities=24%  Similarity=0.545  Sum_probs=64.8

Q ss_pred             ccCCcEEe-cC-----CCCeEEcCCCcEeCCCCCc-ccCcCCCCCCCCceee-------------------C-----Cee
Q psy5614           3 WLMWIQCS-MQ-----SNPSCSCLPNYIGAPPNCR-PECVMNSECASNLACI-------------------N-----EKC   51 (98)
Q Consensus         3 ~~~~a~C~-~~-----g~~~C~C~~Gy~Gdg~~C~-~eC~~~~~C~~~~~C~-------------------~-----~~C   51 (98)
                      |..+++|+ ..     ++|+|.|++||+|++..|+ ++|... +|.++++|+                   +     ..|
T Consensus        56 C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~~~C~~d~C~~~-~C~~~g~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~~C  134 (186)
T 1z1y_A           56 CGEFGQCIENPDPAQVNMYXCGCIEGYTLXEDTCVLDVCQYX-NCGESGECIVEYLSEIQSAGCSCAIGXVPNPEDEXXC  134 (186)
T ss_dssp             EETTEEEEECSSTTSSCSEEEEECTTEEEETTEEEEGGGTTC-CCCTTEEEEEEEETTEEEEEEEECTEEEEETTTTTEE
T ss_pred             CCCCCEeecCCCCcCCCCEECCCCCCCccCCCCCCCCcCcCC-CCCCCCEEeeCCcCCCCCceEECCCCCcccCCCCCcc
Confidence            67789999 77     8999999999999766665 466543 355444443                   1     467


Q ss_pred             c----CCCCCCC-CCCCeeEecCCccEEeCCCCCeeCCC
Q psy5614          52 R----DPCPGSC-GYNAQCKVINHTPICTCPEGYIGDPF   85 (98)
Q Consensus        52 ~----d~C~~~C-~~~a~C~~~~g~~~C~C~~Gy~G~g~   85 (98)
                      +    |+|..+| .++++|+++.++|+|.|++||+|++.
T Consensus       135 ~~~~~~~C~~~C~~~~~~C~n~~g~y~C~C~~G~~g~~~  173 (186)
T 1z1y_A          135 TXTGETACQLXCNTDNEVCXNVEGVYXCQCMEGFTFDXE  173 (186)
T ss_dssp             EEEECCCCCCCCCTTTEEEEEETTEEEEEECTTCEEETT
T ss_pred             eEcCCCcccccccccCcceecCCCCeeeECCCCCccCcc
Confidence            6    5787899 89999999999999999999999875

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A

Probab=99.34  E-value=1.7e-12  Score=85.09  Aligned_cols=80  Identities=18%  Similarity=0.342  Sum_probs=56.8

Q ss_pred             CccCCcEEe-cCCCCeEEcCCCcEeCCCCCcccCcCCCCCCCCceeeCCeec--CCCC---CCCCCCCeeEecCCccEEe
Q psy5614           2 SWLMWIQCS-MQSNPSCSCLPNYIGAPPNCRPECVMNSECASNLACINEKCR--DPCP---GSCGYNAQCKVINHTPICT   75 (98)
Q Consensus         2 ~~~~~a~C~-~~g~~~C~C~~Gy~Gdg~~C~~eC~~~~~C~~~~~C~~~~C~--d~C~---~~C~~~a~C~~~~g~~~C~   75 (98)
                      .|..+++|+ +.++|+|.|++||+|+.  +...+..         ..+..|+  |+|.   ++|+++++|+++.++|+|.
T Consensus        54 ~C~~~~~C~n~~g~y~C~C~~Gy~g~~--~~~~~~~---------~~~~~C~dideC~~~~~~C~~~~~C~n~~g~y~C~  122 (143)
T 2bou_A           54 SCGKFSDCWNTEGSYDCVCSPGYEPVS--GAKTFKN---------ESENTCQDVDECSSGQHQCDSSTVCFNTVGSYSCR  122 (143)
T ss_dssp             CCCTTEEEEECSSCEEEEECTTEEETT--CCSCBSS---------GGGCCEEECCHHHHTCCCCCTTSEEEECSSCEEEE
T ss_pred             CCCCCCEEEcCCCCeEeECCCCcccCc--Ccccccc---------CCCCCcCCccCccCcCCCCCCCCEEECCCCCEEee
Confidence            377789999 99999999999999952  1100000         0011232  4552   6899999999999999999


Q ss_pred             CCCCCeeCCC-CCCccCC
Q psy5614          76 CPEGYIGDPF-SSCFPKP   92 (98)
Q Consensus        76 C~~Gy~G~g~-~~C~~~~   92 (98)
                      |++||+|+.. ..|++++
T Consensus       123 C~~Gy~g~~~~~~C~~~~  140 (143)
T 2bou_A          123 CRPGWKPRHGIPNNQKDT  140 (143)
T ss_dssp             CCSSSCBCTTCCSSBTTC
T ss_pred             CCCCcccCCCCccCccCC
Confidence            9999998642 3576654

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*

Probab=99.30  E-value=4.2e-12  Score=101.17  Aligned_cols=87  Identities=31%  Similarity=0.750  Sum_probs=68.3

Q ss_pred             CccCCcEEe-cC-CCCeE-EcCCCcEeCCCCCcc--cCcCC-CCCCCCc---eeeC------------------------
Q psy5614           2 SWLMWIQCS-MQ-SNPSC-SCLPNYIGAPPNCRP--ECVMN-SECASNL---ACIN------------------------   48 (98)
Q Consensus         2 ~~~~~a~C~-~~-g~~~C-~C~~Gy~Gdg~~C~~--eC~~~-~~C~~~~---~C~~------------------------   48 (98)
                      .|..+++|+ .. ++|+| .|++||+|++..|++  ||... ..|.+++   +|++                        
T Consensus        10 PC~~gg~C~n~~~Gsy~C~~C~~GytGdg~~CeDiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~G~~c~g~g~   89 (634)
T 1yo8_A           10 PCFPGAQCSSFPDGSWSCGFCPVGFLGNGTHCEDLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGNQPVGVGL   89 (634)
T ss_dssp             CSCTTCCEEECTTSCEEECCCCTTBCSCSSSCCBCCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTTEEECCCEESSS
T ss_pred             CCCCCCEEecCCCCCeECCcCCCccCCCCCCccccccccCCCCcccCCccccceeeccCceecccCCCCcccCccccccc
Confidence            478899999 65 46999 999999999999984  77643 2365544   3321                        


Q ss_pred             -------Ceec--CCCC---CCCCCCCeeEecC----CccEEeCCCCCeeCCCCCCc
Q psy5614          49 -------EKCR--DPCP---GSCGYNAQCKVIN----HTPICTCPEGYIGDPFSSCF   89 (98)
Q Consensus        49 -------~~C~--d~C~---~~C~~~a~C~~~~----g~~~C~C~~Gy~G~g~~~C~   89 (98)
                             ..|+  ++|.   ++|+++++|+++.    ++|+|+|++||+|+|. .|.
T Consensus        90 ~~~~~dg~~C~dideC~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~GdG~-~Ce  145 (634)
T 1yo8_A           90 EAAKTEKQVCEPENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGYAGDGL-ICG  145 (634)
T ss_dssp             HHHHSCCCCEEECCTTTTTCCCCCTTEEEEECCTTCSSSEEEEECTTEEESSS-SEE
T ss_pred             cccccCCCcccccccccCCCcccccCccccccccccccceeeeccCCccccCc-ccc
Confidence                   1266  8894   5999999999998    8999999999999987 685

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A

Probab=99.27  E-value=9.4e-13  Score=89.73  Aligned_cols=87  Identities=24%  Similarity=0.570  Sum_probs=66.0

Q ss_pred             ccCCcEEe-cCCCCeEEcCCCcEeC-CCCCc--ccCcC---CCCCCCCceeeCC----------------------eec-
Q psy5614           3 WLMWIQCS-MQSNPSCSCLPNYIGA-PPNCR--PECVM---NSECASNLACINE----------------------KCR-   52 (98)
Q Consensus         3 ~~~~a~C~-~~g~~~C~C~~Gy~Gd-g~~C~--~eC~~---~~~C~~~~~C~~~----------------------~C~-   52 (98)
                      |. |++|+ ..++|+|.|++||+|+ +..|+  +||..   ..+|.++++|++.                      .|+ 
T Consensus        13 C~-ng~C~~~~g~~~C~C~~G~~g~~~~~C~~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~~~C~~   91 (186)
T 1z1y_A           13 CX-NGQLVQMSNHFXCMCNEGLVHLSENTCEEXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXEDTCVL   91 (186)
T ss_dssp             CB-TEEEEECSSCEEEEECTTEEEEETTEEEECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEETTEEEE
T ss_pred             CC-CCEeECCCCCeEeECCCCCccCCCCccCCCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccCCCCCCC
Confidence            55 67999 8899999999999995 45786  47863   3456665555321                      333 


Q ss_pred             CCCC-CCCCCCCeeE----ecCCccEEeCCCCCee---CCCCCCccC
Q psy5614          53 DPCP-GSCGYNAQCK----VINHTPICTCPEGYIG---DPFSSCFPK   91 (98)
Q Consensus        53 d~C~-~~C~~~a~C~----~~~g~~~C~C~~Gy~G---~g~~~C~~~   91 (98)
                      |+|. .+|.++++|+    ++.++|+|.|++||+|   ++. .|..+
T Consensus        92 d~C~~~~C~~~g~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~-~C~~~  137 (186)
T 1z1y_A           92 DVCQYXNCGESGECIVEYLSEIQSAGCSCAIGXVPNPEDEX-XCTXT  137 (186)
T ss_dssp             GGGTTCCCCTTEEEEEEEETTEEEEEEEECTEEEEETTTTT-EEEEE
T ss_pred             CcCcCCCCCCCCEEeeCCcCCCCCceEECCCCCcccCCCCC-cceEc
Confidence            7785 7899999999    7778999999999999   666 67654

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1

Probab=99.22  E-value=6.1e-12  Score=76.48  Aligned_cols=62  Identities=26%  Similarity=0.509  Sum_probs=48.0

Q ss_pred             ccCCcEEe-cCCCCeEEcCCCcEeC---CCCCcc--cCcCCCCCCCCceeeCCeecCCCCCCCCCCCeeEecCCccEEeC
Q psy5614           3 WLMWIQCS-MQSNPSCSCLPNYIGA---PPNCRP--ECVMNSECASNLACINEKCRDPCPGSCGYNAQCKVINHTPICTC   76 (98)
Q Consensus         3 ~~~~a~C~-~~g~~~C~C~~Gy~Gd---g~~C~~--eC~~~~~C~~~~~C~~~~C~d~C~~~C~~~a~C~~~~g~~~C~C   76 (98)
                      | .+++|+ +.++|+|.|++||+++   +..|++  ||....                  ..|. +++|+++.++|+|.|
T Consensus        13 C-~~g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~dideC~~~~------------------~~C~-~~~C~n~~g~y~C~C   72 (86)
T 1lmj_A           13 C-GRGQCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRDP------------------LLCR-GGVCHNTEGSYRCEC   72 (86)
T ss_dssp             T-TTSCEEEETTEEEECCCSSEEECTTTSSSEEECCHHHHCS------------------STTT-TSEEEEETTEEEEES
T ss_pred             C-CCCEEECCCCCEEeeCCCCcCccCCCCCccCCcccccCCC------------------CcCC-CCEeEcCCCCEEEEC
Confidence            5 356999 9999999999999974   456652  443221                  3475 689999999999999


Q ss_pred             CCCCeeCC
Q psy5614          77 PEGYIGDP   84 (98)
Q Consensus        77 ~~Gy~G~g   84 (98)
                      ++||+++.
T Consensus        73 ~~G~~~~~   80 (86)
T 1lmj_A           73 PPGHQLSP   80 (86)
T ss_dssp             CTTSCCCS
T ss_pred             cCCcccCC
Confidence            99999853

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A

Probab=99.13  E-value=5e-11  Score=78.03  Aligned_cols=62  Identities=26%  Similarity=0.500  Sum_probs=47.2

Q ss_pred             CccCCcEEe-cCCCCeEEcCCCcEeCC-------CCCc--ccCcCCCCCCCCceeeCCeecCCCCCCCCCCCeeEecCCc
Q psy5614           2 SWLMWIQCS-MQSNPSCSCLPNYIGAP-------PNCR--PECVMNSECASNLACINEKCRDPCPGSCGYNAQCKVINHT   71 (98)
Q Consensus         2 ~~~~~a~C~-~~g~~~C~C~~Gy~Gdg-------~~C~--~eC~~~~~C~~~~~C~~~~C~d~C~~~C~~~a~C~~~~g~   71 (98)
                      -|..+|+|+ .   |+|.|++||+|+.       ..|+  +||....                 ..+|.++++|+++.++
T Consensus         8 ~C~~~~~C~~~---~~C~C~~G~~g~~~~~~~~~~~C~dideC~~~~-----------------~~~C~~~~~C~n~~g~   67 (143)
T 2bou_A            8 WCPQDSSCVNA---TACRCNPGFSSFSEIITTPMETCDDINECATLS-----------------KVSCGKFSDCWNTEGS   67 (143)
T ss_dssp             TCCTTEEESSS---SCEEECTTEECSSSSBCSTTCCCEECCGGGC---------------------CCCTTEEEEECSSC
T ss_pred             cCCCCCEEcCC---CEEeCCCCCcCccccccCCCCcCCccccccCCC-----------------CCCCCCCCEEEcCCCC
Confidence            377899997 4   8999999999952       3443  1333210                 0379999999999999


Q ss_pred             cEEeCCCCCeeC
Q psy5614          72 PICTCPEGYIGD   83 (98)
Q Consensus        72 ~~C~C~~Gy~G~   83 (98)
                      |+|.|++||+|+
T Consensus        68 y~C~C~~Gy~g~   79 (143)
T 2bou_A           68 YDCVCSPGYEPV   79 (143)
T ss_dssp             EEEEECTTEEET
T ss_pred             eEeECCCCcccC
Confidence            999999999997

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*

Probab=99.11  E-value=5.8e-11  Score=78.81  Aligned_cols=68  Identities=28%  Similarity=0.606  Sum_probs=52.7

Q ss_pred             CccCCcEEe-cCCCCeEEcCCCcEeCCCCCcc--cCcCCCCCCCCceeeCCeecCCCCCCCCCCCee-EecCCccEEeCC
Q psy5614           2 SWLMWIQCS-MQSNPSCSCLPNYIGAPPNCRP--ECVMNSECASNLACINEKCRDPCPGSCGYNAQC-KVINHTPICTCP   77 (98)
Q Consensus         2 ~~~~~a~C~-~~g~~~C~C~~Gy~Gdg~~C~~--eC~~~~~C~~~~~C~~~~C~d~C~~~C~~~a~C-~~~~g~~~C~C~   77 (98)
                      .|..+++|+ ..++|+|.|++||+|  ..|++  +|....                  .+|..  +| +++.++|+|.|+
T Consensus        55 pC~n~g~C~~~~~~y~C~C~~G~~G--~~C~~~deC~~~~------------------~~C~~--~C~~n~~g~y~C~C~  112 (146)
T 1x7a_L           55 PCLNGGLCKDDINSYECWCQVGFEG--KNCELDATCNIKN------------------GRCKQ--FCKTGADSKVLCSCT  112 (146)
T ss_dssp             SSCTTCEEEECSSCEEEECCSSEES--TTTCEECCTTSGG------------------GSCSS--BCCCCSSSCCCCBCC
T ss_pred             CCCCCCEeECCCCCEEEecCCCCcC--CcCCCCccccCCC------------------CCCcC--CCCCCCCCCEEeEcC
Confidence            367789999 999999999999998  67763  443321                  35664  89 899999999999


Q ss_pred             CCCe--eCCCCCCccCC
Q psy5614          78 EGYI--GDPFSSCFPKP   92 (98)
Q Consensus        78 ~Gy~--G~g~~~C~~~~   92 (98)
                      +||+  +||. .|..++
T Consensus       113 ~Gy~l~~dG~-~C~~~~  128 (146)
T 1x7a_L          113 TGYRLAPDQK-SCKPAV  128 (146)
T ss_dssp             TTEEECTTSS-SEEECS
T ss_pred             CCcEeCCCCC-cCCCCC
Confidence            9999  4565 687653

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*

Probab=99.10  E-value=1.4e-10  Score=73.75  Aligned_cols=66  Identities=24%  Similarity=0.531  Sum_probs=50.7

Q ss_pred             ccCCcEEe-cCCCCeEEcCCCcEeCCCCCcc-----cCcCCCCCCCCceeeCCeecCCCCCCCCCCCeeEecCCccEEeC
Q psy5614           3 WLMWIQCS-MQSNPSCSCLPNYIGAPPNCRP-----ECVMNSECASNLACINEKCRDPCPGSCGYNAQCKVINHTPICTC   76 (98)
Q Consensus         3 ~~~~a~C~-~~g~~~C~C~~Gy~Gdg~~C~~-----eC~~~~~C~~~~~C~~~~C~d~C~~~C~~~a~C~~~~g~~~C~C   76 (98)
                      |..+++|+ ..++|+|.|++||+|  ..|++     +|...                  .+.|..  +|+++.++|+|+|
T Consensus        22 C~~~g~C~~~~~~y~C~C~~G~~G--~~C~~~~~~~~C~~~------------------~~~C~~--~C~n~~g~y~C~C   79 (114)
T 1aut_L           22 CCGHGTCIDGIGSFSCDCRSGWEG--RFCQREVSFLNCSLD------------------NGGCTH--YCLEEVGWRRCSC   79 (114)
T ss_dssp             TTTSEEECCCSSCCCEEECTTEES--TTSCEECCSSSSSSG------------------GGGCSS--EEEECSSSEEEEC
T ss_pred             CCCcCCCCCCCCCcEeeCCCCCcC--CCcCcCCcCCcCcCC------------------CCCCCC--EeECCCCCEEeEC
Confidence            77899999 999999999999998  45653     23211                  034543  8999999999999


Q ss_pred             CCCCeeC--CCCCCccC
Q psy5614          77 PEGYIGD--PFSSCFPK   91 (98)
Q Consensus        77 ~~Gy~G~--g~~~C~~~   91 (98)
                      ++||+|.  +. .|.++
T Consensus        80 ~~G~~~~~~g~-~C~~~   95 (114)
T 1aut_L           80 APGYKLGDDLL-QCHPA   95 (114)
T ss_dssp             CTTEEECTTSS-CEEEC
T ss_pred             CCCeeECCCCC-ccCcC
Confidence            9999964  54 67664

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}

Probab=99.02  E-value=5.4e-10  Score=73.47  Aligned_cols=80  Identities=25%  Similarity=0.563  Sum_probs=55.0

Q ss_pred             ccCCcEEe-cCCCCeEEcCCCcEeCC--CCCcc-------------cCcC-------C------------C---------
Q psy5614           3 WLMWIQCS-MQSNPSCSCLPNYIGAP--PNCRP-------------ECVM-------N------------S---------   38 (98)
Q Consensus         3 ~~~~a~C~-~~g~~~C~C~~Gy~Gdg--~~C~~-------------eC~~-------~------------~---------   38 (98)
                      |. |++|+ +.++|+|.|++||+|+.  ..|.+             .|..       .            .         
T Consensus        12 C~-ng~C~n~~g~y~C~C~~G~~g~~~~~~C~~~~~~~C~~~~~g~~C~~~~~~c~~~~~C~~~~g~~~g~~C~~c~~~C   90 (147)
T 2w86_A           12 CI-NGVCKNSPGSFICECSSESTLDPTKTICIETIKGTCWQTVIDGRCEININGATLKSQCCSSLGAAWGSPCTLCQVDP   90 (147)
T ss_dssp             SB-TSEEEEETTEEEEECCTTEEECTTSSBEEECCCEEEEEEEETTEEEEEEEEEECHHHHHTTTCSEETTTTEECCCCT
T ss_pred             CC-CCEeECCCCCEEeECCCCcccCCCCCeecCCCCCcccCCCCCCccccCCCccccCCccccCcCcccCCCcccCCCcc
Confidence            54 68999 99999999999999863  23321             1110       0            0         


Q ss_pred             CCCCCcee-eCCeec--CCCC---CCCCCCCeeEecCCccEEeCCCCCeeCC
Q psy5614          39 ECASNLAC-INEKCR--DPCP---GSCGYNAQCKVINHTPICTCPEGYIGDP   84 (98)
Q Consensus        39 ~C~~~~~C-~~~~C~--d~C~---~~C~~~a~C~~~~g~~~C~C~~Gy~G~g   84 (98)
                      .|...++= .+..|+  |+|.   ++|. +++|+++.++|+|.|++||+|+.
T Consensus        91 ~C~~Gy~~~~g~~C~dideC~~~~~~C~-~g~C~n~~g~y~C~C~~Gy~g~~  141 (147)
T 2w86_A           91 ICGKGYSRIKGTQCEDIDECEVFPGVCK-NGLCVNTRGSFKCQCPSGMTLDA  141 (147)
T ss_dssp             TTCTTEEEEETTEEEECCHHHHSTTCSS-SSEEEEETTEEEEECCTTCCBCT
T ss_pred             cCCCccccCCCCccCccccccCCCCCCC-CCEEECCCCCEEeeCCCCCccCC
Confidence            12221110 256787  8884   5598 56999999999999999999874

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A

Probab=99.02  E-value=1.3e-10  Score=74.36  Aligned_cols=75  Identities=28%  Similarity=0.669  Sum_probs=54.2

Q ss_pred             EEe-c-CCCCeEEcCCCcEeCCC---CCcccCcCC---CCCCCC--cee------e---CCeec--CCCC--CCCCCCCe
Q psy5614           8 QCS-M-QSNPSCSCLPNYIGAPP---NCRPECVMN---SECASN--LAC------I---NEKCR--DPCP--GSCGYNAQ   64 (98)
Q Consensus         8 ~C~-~-~g~~~C~C~~Gy~Gdg~---~C~~eC~~~---~~C~~~--~~C------~---~~~C~--d~C~--~~C~~~a~   64 (98)
                      +|+ . .++|+|.|++||+|+..   .|.++|...   ..|.+.  ++|      .   +..|+  |+|.  ++|  +++
T Consensus        15 ~C~~~~~g~y~C~C~~Gy~g~~~~~~~C~~~C~~~~C~~~C~~~~~y~C~C~~Gy~~~~g~~C~dideC~~~~~C--~~~   92 (118)
T 1dx5_I           15 QCQPLDQTSYLCVCAEGFAPIPHEPHRCQMFCNQTACPADCDPNTQASCECPEGYILDDGFICTDIDECENGGFC--SGV   92 (118)
T ss_dssp             EEEECSSSCEEEECCTTEEEETTEEEEEEECCCSSEEECEECTTSTTCEECCTTEEEETTTEEEECCHHHHCSSC--SSE
T ss_pred             CCCCCCCCCEEeECCCCccccCCCCCccccccCCCCCCCcccCCCCeEeECCCCccCCCCCccccccccCCCCCC--cCe
Confidence            899 8 89999999999999632   343334322   223321  234      1   45787  8883  789  799


Q ss_pred             eEecCCccEEeCCCCCeeCC
Q psy5614          65 CKVINHTPICTCPEGYIGDP   84 (98)
Q Consensus        65 C~~~~g~~~C~C~~Gy~G~g   84 (98)
                      |+++.++|+|.|++||+|++
T Consensus        93 C~n~~g~y~C~C~~G~~g~~  112 (118)
T 1dx5_I           93 CHNLPGTFECICGPDSALAG  112 (118)
T ss_dssp             EEECSSSEEEEECSSSSCEE
T ss_pred             EEeCCCCEEEECCCCCccCC
Confidence            99999999999999998764

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...

Probab=99.00  E-value=1.7e-10  Score=75.39  Aligned_cols=68  Identities=26%  Similarity=0.734  Sum_probs=28.6

Q ss_pred             ccCCcEEe-cCCCCeEEcCCCcEeCCCCCcc----cCcCCCCCCCCceeeCCeecCCCCCCCCCCCeeEecCCccEEeCC
Q psy5614           3 WLMWIQCS-MQSNPSCSCLPNYIGAPPNCRP----ECVMNSECASNLACINEKCRDPCPGSCGYNAQCKVINHTPICTCP   77 (98)
Q Consensus         3 ~~~~a~C~-~~g~~~C~C~~Gy~Gdg~~C~~----eC~~~~~C~~~~~C~~~~C~d~C~~~C~~~a~C~~~~g~~~C~C~   77 (98)
                      |..+++|+ ..++|+|.|++||+|  ..|++    +|....                  .+|..  +|+++.++|+|.|+
T Consensus        50 C~n~g~C~~~~~~y~C~C~~G~~G--~~C~~~i~d~C~~~~------------------~~C~~--~C~~~~g~y~C~C~  107 (134)
T 2vh0_B           50 CQNQGKCKDGLGEYTCTCLEGFEG--KNCELFTRKLCSLDN------------------GDCDQ--FCHEEQNSVVCSCA  107 (134)
T ss_dssp             ---------------------------------CCGGGTGG------------------GGCSS--EEEEETTEEEEECC
T ss_pred             CCCcCCcccCCCCEEeeCCCCccC--CccccCCCCccccCC------------------CCCCC--EeECCCCCEEEECC
Confidence            67789999 889999999999998  56642    233210                  35664  99999999999999


Q ss_pred             CCCe--eCCCCCCccCCC
Q psy5614          78 EGYI--GDPFSSCFPKPP   93 (98)
Q Consensus        78 ~Gy~--G~g~~~C~~~~~   93 (98)
                      +||+  ++|. .|..+++
T Consensus       108 ~Gy~l~~~g~-~C~~~~~  124 (134)
T 2vh0_B          108 RGYTLADNGK-ACIPTGP  124 (134)
T ss_dssp             TTEEECTTSS-CEEESSS
T ss_pred             CCcEECCCCC-ccCcCCC
Confidence            9999  5565 6877643

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*

Probab=99.00  E-value=1.6e-10  Score=80.34  Aligned_cols=67  Identities=25%  Similarity=0.708  Sum_probs=28.8

Q ss_pred             ccCCcEEe-cCCCCeEEcCCCcEeCCCCCcc----cCcCCCCCCCCceeeCCeecCCCCCCCCCCCeeEecCCccEEeCC
Q psy5614           3 WLMWIQCS-MQSNPSCSCLPNYIGAPPNCRP----ECVMNSECASNLACINEKCRDPCPGSCGYNAQCKVINHTPICTCP   77 (98)
Q Consensus         3 ~~~~a~C~-~~g~~~C~C~~Gy~Gdg~~C~~----eC~~~~~C~~~~~C~~~~C~d~C~~~C~~~a~C~~~~g~~~C~C~   77 (98)
                      |..+++|+ ..++|+|.|++||+|  ..|++    +|....                  .+|..  .|+++.++|+|.|+
T Consensus        50 C~ngg~C~n~~g~y~C~C~~Gf~G--~~Ce~~i~deC~~~~------------------~~C~~--~C~n~~gsy~C~C~  107 (195)
T 1nfu_B           50 CQNQGKCKDGLGEYTCTCLEGFEG--KNCELFTRKLCSLDN------------------GDCDQ--FCHEEQNSVVCSCA  107 (195)
T ss_dssp             ---------------------------------CCGGGTGG------------------GGCSS--EEEEETTEEEEECC
T ss_pred             CCCCCEeECCCCCeeEeCCCCcee--ccccccccccccCCC------------------CCCCC--EeECCCCCeEEECC
Confidence            67789999 889999999999998  66752    343211                  35764  99999999999999


Q ss_pred             CCCe--eCCCCCCccCC
Q psy5614          78 EGYI--GDPFSSCFPKP   92 (98)
Q Consensus        78 ~Gy~--G~g~~~C~~~~   92 (98)
                      +||+  ++|. .|..+.
T Consensus       108 ~Gy~l~~dG~-~C~~~~  123 (195)
T 1nfu_B          108 RGYTLADNGK-ACIPTG  123 (195)
T ss_dssp             TTEEECTTSS-CEEESS
T ss_pred             CCceeCCCCC-ccccCC
Confidence            9999  5666 687764

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A

Probab=98.99  E-value=1.4e-10  Score=73.41  Aligned_cols=57  Identities=28%  Similarity=0.687  Sum_probs=21.0

Q ss_pred             cEEe-cCCCCeEEcCCCcEe-CCCCCcc--cCcCCCCCCCCceeeCCeecCCCCCCCCCCCeeEecCCccEEeCCCCCee
Q psy5614           7 IQCS-MQSNPSCSCLPNYIG-APPNCRP--ECVMNSECASNLACINEKCRDPCPGSCGYNAQCKVINHTPICTCPEGYIG   82 (98)
Q Consensus         7 a~C~-~~g~~~C~C~~Gy~G-dg~~C~~--eC~~~~~C~~~~~C~~~~C~d~C~~~C~~~a~C~~~~g~~~C~C~~Gy~G   82 (98)
                      ++|+ ..++|+|.|++||+| ++..|++  ||..                   .++|.  +.|+++.++|+|.|++||++
T Consensus        41 ~~C~n~~g~y~C~C~~Gy~g~~g~~C~dideC~~-------------------~~~C~--~~C~n~~gsy~C~C~~Gy~~   99 (107)
T 2w2n_E           41 YVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQD-------------------PDTCS--QLCVNLEGGYKCQCEEGFQL   99 (107)
T ss_dssp             SEEECCSBSCEEECCTTCEEETTTEEEC----------------------------------------------------
T ss_pred             CEeEeCCCCeEEECCCCccccCCCccccccccCC-------------------CCCcC--CeeecCCCCEEEECCCCceE
Confidence            4899 889999999999998 4456642  3431                   14675  79999999999999999998


Q ss_pred             CC
Q psy5614          83 DP   84 (98)
Q Consensus        83 ~g   84 (98)
                      +.
T Consensus       100 ~~  101 (107)
T 2w2n_E          100 DP  101 (107)
T ss_dssp             --
T ss_pred             CC
Confidence            64

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A

Probab=98.98  E-value=1.8e-10  Score=76.87  Aligned_cols=80  Identities=23%  Similarity=0.599  Sum_probs=55.7

Q ss_pred             ccCCcEEe-cCCCCeEEcCCCcEeC--CCCCcc--c--CcC---------CCCCCCC-------ce--------------
Q psy5614           3 WLMWIQCS-MQSNPSCSCLPNYIGA--PPNCRP--E--CVM---------NSECASN-------LA--------------   45 (98)
Q Consensus         3 ~~~~a~C~-~~g~~~C~C~~Gy~Gd--g~~C~~--e--C~~---------~~~C~~~-------~~--------------   45 (98)
                      |. +++|+ +.++|+|.|++||+++  |..|++  +  |..         ...|.+.       ++              
T Consensus        12 C~-~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C~C~~G~~~~~~C~   90 (162)
T 1uzk_A           12 CI-SGNCVNTPGSYICDCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASCCCSLGKAWGTPCE   90 (162)
T ss_dssp             SB-TSEEEEETTEEEEECCTTCEECTTSSBEECCCCEEEEEEC----------CEEEEEEEECHHHHHTTTCCEETTTTE
T ss_pred             CC-CCEeECCCCCEEEeCCCCCeECCCCCcccCCCCCcccCCCcccCCCCCCcccCCcCCcccCceeeCCCCCCcCCCcc
Confidence            54 78999 9999999999999974  678863  3  542         1223221       01              


Q ss_pred             -------------ee---C-------Ceec--CCCC---CCCCCCCeeEecCCccEEeCCCCCeeCC
Q psy5614          46 -------------CI---N-------EKCR--DPCP---GSCGYNAQCKVINHTPICTCPEGYIGDP   84 (98)
Q Consensus        46 -------------C~---~-------~~C~--d~C~---~~C~~~a~C~~~~g~~~C~C~~Gy~G~g   84 (98)
                                   |.   +       ..|+  |||.   ++|. +++|+++.++|+|.|++||+|+.
T Consensus        91 ~C~~~~~~~y~C~C~~g~G~~~~~~~~~c~dideC~~~~~~C~-~g~C~n~~gsy~C~C~~Gy~g~~  156 (162)
T 1uzk_A           91 MCPAVNTSEYKILCPGGEGFRPNPITVILEDIDECQELPGLCQ-GGKCINTFGSFQCRCPTGYYLNE  156 (162)
T ss_dssp             ECCCTTSHHHHHHCTTCTTEEECTTTCCEEECCHHHHCGGGGB-TSEEEECSSCEEEECCTTCCBCT
T ss_pred             cCCCCCCCCceeECCCCCCcccCCCCCccCccccccCCCCCcC-CCEeEcCCCCEEeeCCCCccCCC
Confidence                         10   1       1345  7883   5697 48999999999999999999953

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...

Probab=98.94  E-value=8.8e-10  Score=72.51  Aligned_cols=71  Identities=30%  Similarity=0.664  Sum_probs=51.2

Q ss_pred             CccCCcEEe-cCCCCeEEcCCCcEeCCCCCcc---cCcCCCCCCCCceeeCCeecCCCCCCCCCCCeeEecCC-ccEEeC
Q psy5614           2 SWLMWIQCS-MQSNPSCSCLPNYIGAPPNCRP---ECVMNSECASNLACINEKCRDPCPGSCGYNAQCKVINH-TPICTC   76 (98)
Q Consensus         2 ~~~~~a~C~-~~g~~~C~C~~Gy~Gdg~~C~~---eC~~~~~C~~~~~C~~~~C~d~C~~~C~~~a~C~~~~g-~~~C~C   76 (98)
                      .|..+++|+ ..++|+|.|++||+|  ..|++   +|..   |...            .+.|..  +|+++.+ +|+|.|
T Consensus        54 pC~n~g~C~~~~g~y~C~C~~G~~G--~~C~~~~~~c~~---c~~~------------~~~C~~--~C~~~~g~~y~C~C  114 (142)
T 2c4f_L           54 PCQNGGSCKDQLQSYICFCLPAFEG--RNCETHKDDQLI---CVNE------------NGGCEQ--YCSDHTGTKRSCRC  114 (142)
T ss_dssp             CCCTTCEEEEETTEEEEECCTTEES--TTSCEEGGGCCS---TTTG------------GGGCSS--EEECCTTSCCEEEC
T ss_pred             CcCCCCEEeCCCCCEEeeCCCCccC--CccccCcccccc---ccCC------------CCCccC--EeECCCCCCEEEEC
Confidence            367789999 999999999999998  67753   2211   1000            023442  8999999 999999


Q ss_pred             CCCCe--eCCCCCCccCC
Q psy5614          77 PEGYI--GDPFSSCFPKP   92 (98)
Q Consensus        77 ~~Gy~--G~g~~~C~~~~   92 (98)
                      ++||+  +||. .|.+++
T Consensus       115 ~~Gy~l~~dG~-~C~~~~  131 (142)
T 2c4f_L          115 HEGYSLLADGV-SCTPTV  131 (142)
T ss_dssp             CTTEEECTTSS-CEEESS
T ss_pred             CCCceECCCCC-CCCCCC
Confidence            99999  5565 677654

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}

Probab=98.91  E-value=3.9e-10  Score=68.56  Aligned_cols=65  Identities=23%  Similarity=0.472  Sum_probs=47.5

Q ss_pred             ccCCcEEe-cCCCCeEEcCCCcEeC--CCCCcc--cCcCCCCCCCCceeeCCeecCCCCCCCCCCCeeEecCCccEEeCC
Q psy5614           3 WLMWIQCS-MQSNPSCSCLPNYIGA--PPNCRP--ECVMNSECASNLACINEKCRDPCPGSCGYNAQCKVINHTPICTCP   77 (98)
Q Consensus         3 ~~~~a~C~-~~g~~~C~C~~Gy~Gd--g~~C~~--eC~~~~~C~~~~~C~~~~C~d~C~~~C~~~a~C~~~~g~~~C~C~   77 (98)
                      | .+++|+ ..++|+|.|++||+++  +..|++  ||..                    ++|.  ++|+++.++|+|.|+
T Consensus        13 C-~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~dideC~~--------------------~~C~--~~C~n~~g~y~C~C~   69 (87)
T 1z6c_A           13 C-GTAVCKNIPGDFECECPEGYRYNLKSKSCEDIDECSE--------------------NMCA--QLCVNYPGGYTCYCD   69 (87)
T ss_dssp             B-TTSSCCCBTTBCCCSSSTTCEEETTTTEEECCCHHHH--------------------SCCS--SEECCCSSSCCEECC
T ss_pred             C-CCCEeECCCCCEEEECCCCceECCCCCcCCCcCeeCC--------------------CCCC--CEEEccCCCEEEECC
Confidence            5 678999 9999999999999974  455642  3321                    5786  799999999999995


Q ss_pred             --CCCee--CCCCCCccC
Q psy5614          78 --EGYIG--DPFSSCFPK   91 (98)
Q Consensus        78 --~Gy~G--~g~~~C~~~   91 (98)
                        +||.-  ++. .|.++
T Consensus        70 g~~G~~~~~~~~-~C~di   86 (87)
T 1z6c_A           70 GKKGFKLAQDQK-SCEVV   86 (87)
T ss_dssp             SSSCCBCCTTSS-SCBCC
T ss_pred             CCcCCcccCCCC-cceEC
Confidence              66652  233 56654

>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A

Probab=98.90  E-value=1.5e-09  Score=68.22  Aligned_cols=66  Identities=24%  Similarity=0.541  Sum_probs=51.5

Q ss_pred             CccCCcEEe--cCCCCeEEcCCCcEeCCCCCcccCcCCCCCCCCceeeCCeecCCCCCCCCCCCeeEecC-----CccEE
Q psy5614           2 SWLMWIQCS--MQSNPSCSCLPNYIGAPPNCRPECVMNSECASNLACINEKCRDPCPGSCGYNAQCKVIN-----HTPIC   74 (98)
Q Consensus         2 ~~~~~a~C~--~~g~~~C~C~~Gy~Gdg~~C~~eC~~~~~C~~~~~C~~~~C~d~C~~~C~~~a~C~~~~-----g~~~C   74 (98)
                      .|.+||.|.  ..+...|+|++||.|||..|.+.  ....|..+            .+.|+++|.|+...     +...|
T Consensus        11 ~C~~NA~C~r~~~g~e~C~C~~gy~gdg~~Cv~~--~~~sC~~n------------NGGCd~nA~C~~~~~~~~~~ki~C   76 (99)
T 1ob1_C           11 QCPQNSGCFRHLDEREECKCLLNYKQEGDKCVEN--PNPTCNEN------------NGGCDADAKCTEEDSGSNGKKITC   76 (99)
T ss_dssp             CCCTTEEEECCTTSCCEEEECTTEEEETTEEEEC--SCCCSTTG------------GGGCCTTEEEECCSCSSSSCCCEE
T ss_pred             CCCCCCCeEEcCCCCEEEEecCCeecCCCeEeeC--CCCChhhc------------CCCcCCCceeEecCCcccCCceEe
Confidence            478999999  88999999999999999988631  01112211            15799999999975     68899


Q ss_pred             eCCCCCe
Q psy5614          75 TCPEGYI   81 (98)
Q Consensus        75 ~C~~Gy~   81 (98)
                      +|++||.
T Consensus        77 ~C~~g~~   83 (99)
T 1ob1_C           77 ECTKPDS   83 (99)
T ss_dssp             EECSTTC
T ss_pred             EeCCCCc
Confidence            9999975

>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4

Probab=98.75  E-value=2.2e-08  Score=63.33  Aligned_cols=73  Identities=19%  Similarity=0.434  Sum_probs=55.9

Q ss_pred             CccCCcEEe--cCCCCeEEcCCCcEeCCCCCcccCcCCCCCCCCceeeCCeecCCCCCCCCCCCeeEecC-CccEEeCCC
Q psy5614           2 SWLMWIQCS--MQSNPSCSCLPNYIGAPPNCRPECVMNSECASNLACINEKCRDPCPGSCGYNAQCKVIN-HTPICTCPE   78 (98)
Q Consensus         2 ~~~~~a~C~--~~g~~~C~C~~Gy~Gdg~~C~~eC~~~~~C~~~~~C~~~~C~d~C~~~C~~~a~C~~~~-g~~~C~C~~   78 (98)
                      .|.+||.|.  .+|...|+|+.||.+||..|.+.   +..|..+            .+.|+.+|.|+.+. ....|.|++
T Consensus        17 ~Cp~NA~C~r~~~G~e~CrCl~gY~~dg~~Cv~~---Np~C~~n------------NGGCd~nAeC~~~~~~ki~C~C~~   81 (105)
T 1n1i_A           17 NVPENAACYRYLDGTEEWRCLLGFKEVGGKCVPA---SITCEEN------------NGGCAPEAECTMDDKKEVECKCTK   81 (105)
T ss_dssp             CCCTTEEEEECTTSCEEEEECTTEEECSSSEEEC---CCCTTSG------------GGGSCTTSEEEECTTSCEEEECCS
T ss_pred             CCCCCCCeEECCCCCEeEEEECCeeccCCEEEEC---Ccchhhc------------CCCcCCCcEeEECCCCEEEeECCC
Confidence            478999999  88999999999999999988741   1112211            15799999999986 789999999


Q ss_pred             CCe---eCCCCCCcc
Q psy5614          79 GYI---GDPFSSCFP   90 (98)
Q Consensus        79 Gy~---G~g~~~C~~   90 (98)
                      +|.   .+|. .|.+
T Consensus        82 ~~~~~~~~Gv-fC~~   95 (105)
T 1n1i_A           82 EGSEPLFEGV-FCSS   95 (105)
T ss_dssp             TTCCEEGGGT-EECC
T ss_pred             CCCccccceE-EECC
Confidence            963   4564 5654

>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A

Probab=98.73  E-value=1e-08  Score=62.87  Aligned_cols=70  Identities=20%  Similarity=0.486  Sum_probs=48.1

Q ss_pred             CCeEEcCCCcEeCCCCCc-ccCcCCCCCCCC---ceee---C-Ceec----CCCC-CCCCCCCeeEecC--CccEEeCCC
Q psy5614          14 NPSCSCLPNYIGAPPNCR-PECVMNSECASN---LACI---N-EKCR----DPCP-GSCGYNAQCKVIN--HTPICTCPE   78 (98)
Q Consensus        14 ~~~C~C~~Gy~Gdg~~C~-~eC~~~~~C~~~---~~C~---~-~~C~----d~C~-~~C~~~a~C~~~~--g~~~C~C~~   78 (98)
                      +|+|.|.+||+|  ..|+ ++|.. .+|.+.   .+|.   + ..|+    |+|. .+|.++++|++..  ++|+|.|++
T Consensus         1 sy~C~C~~g~~g--~~c~~~~c~~-~pC~n~~~~y~C~C~~G~~~C~~~~~~~C~~~pC~ngg~C~~~~~~~~~~C~C~~   77 (91)
T 1tpg_A            1 SYQVICRDEKTQ--MIYQQHQSWL-RPVLRSNRVEYCWCNSGRAQCHSVPVKSCSEPRCFNGGTCQQALYFSDFVCQCPE   77 (91)
T ss_dssp             CCCCCCBCSSSC--CBCCSSCEEE-EECSSSSCEEEEECSSSCCBCCEECEEECSSCCSCTTCEEEEESSSSCEEEECCT
T ss_pred             CeeeECCCCCcC--CeECCCcccC-CccccCCCCcEeECCCCCcccccCcCCcccCCCCCCCCEeecCCCCCCeEeECCC
Confidence            578888888887  4554 34432 234332   2331   1 2563    6785 7999999999987  899999999


Q ss_pred             CCeeCCCCCCc
Q psy5614          79 GYIGDPFSSCF   89 (98)
Q Consensus        79 Gy~G~g~~~C~   89 (98)
                      ||+|.   .|.
T Consensus        78 G~~G~---~Ce   85 (91)
T 1tpg_A           78 GFAGK---SCE   85 (91)
T ss_dssp             TCBSS---SCC
T ss_pred             CCcCC---cCC
Confidence            99984   464

>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*

Probab=98.71  E-value=1.2e-10  Score=84.47  Aligned_cols=80  Identities=5%  Similarity=-0.160  Sum_probs=64.3

Q ss_pred             ccCCcEEe-cCCCCeEEcCCCcEeCCCCCcc---cCc-----CCCCCCCCceee-CCeec--CCCC-CCCCCCCeeEecC
Q psy5614           3 WLMWIQCS-MQSNPSCSCLPNYIGAPPNCRP---ECV-----MNSECASNLACI-NEKCR--DPCP-GSCGYNAQCKVIN   69 (98)
Q Consensus         3 ~~~~a~C~-~~g~~~C~C~~Gy~Gdg~~C~~---eC~-----~~~~C~~~~~C~-~~~C~--d~C~-~~C~~~a~C~~~~   69 (98)
                      |..+++|+ ..++|+|.|++||+|  ..|+.   ||.     ...+|.+.++|+ +..|.  ++|+ .+|.++++|++..
T Consensus        40 c~ngG~C~~g~~~y~C~Cp~Gf~G--~~Ce~ni~ec~~~~~c~s~pC~nggtc~~G~~c~~~~eC~s~pC~ngG~C~~~~  117 (267)
T 4fbr_A           40 SDDGGKTLKGTMTYNGEGPIGFRG--TLSSANNYTVENQWGGTSAPWQPGGVWVLGARDKQNIVAVSIKSNDGGKTLTGT  117 (267)
T ss_dssp             CSSTTSEEEEEEEETTSCCEEEEE--EECSTTEEEEEEESSSTTSCEEEEEEEECCCCSSCCEEEEEEECSSTTSEEEEE
T ss_pred             cCCCCeecCCCCCeEEeCCCCccc--ccccccccccccccCcCCCcccCCCeeeccCccccccccCCCCCCCCCEEecCC
Confidence            56789999 889999999999999  66762   432     235677667774 55666  6785 8999999999999


Q ss_pred             CccEEeCCCCCeeCC
Q psy5614          70 HTPICTCPEGYIGDP   84 (98)
Q Consensus        70 g~~~C~C~~Gy~G~g   84 (98)
                      .+|+|+|++||+|+.
T Consensus       118 ~sy~C~C~~Gf~G~~  132 (267)
T 4fbr_A          118 TTYNGEGPIGFKSEV  132 (267)
T ss_dssp             EEETTSCCEEEEEEE
T ss_pred             ccEEeeCCCCccccC
Confidence            999999999999953

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}

Probab=98.71  E-value=1.3e-08  Score=73.78  Aligned_cols=70  Identities=27%  Similarity=0.616  Sum_probs=53.3

Q ss_pred             CccCCcEEe-cCCCCeEEcCCCcEeCCCCCc-c--cCcCCCCCCCCceeeCCeecCCCCCCCCCCCeeEecCCccEEeCC
Q psy5614           2 SWLMWIQCS-MQSNPSCSCLPNYIGAPPNCR-P--ECVMNSECASNLACINEKCRDPCPGSCGYNAQCKVINHTPICTCP   77 (98)
Q Consensus         2 ~~~~~a~C~-~~g~~~C~C~~Gy~Gdg~~C~-~--eC~~~~~C~~~~~C~~~~C~d~C~~~C~~~a~C~~~~g~~~C~C~   77 (98)
                      .|..+++|+ ..++|+|.|++||+|  ..|+ +  ||....                 .++|.+  .|+++.++|+|.|+
T Consensus        12 pC~~~g~C~~~~~~~~C~C~~g~~g--~~C~~~~~eC~~~~-----------------~~~C~~--~C~~~~g~~~C~C~   70 (317)
T 3h5c_B           12 PCLHNGSCQDSIWGYTCTCSPGYEG--SNCELAKNECHPER-----------------TDGCQH--FCLPGQESYTCSCA   70 (317)
T ss_dssp             CCTTTCCCCCCSSSCCCCCSSSCCS--SSSCCCSSSCCTTC-----------------TTSCSS--EEECCSSSCEEECC
T ss_pred             CCCCCCEeECCCCCeEEECCCCCcC--CccccCcccCCCCC-----------------CCCCcC--ccccCCCeeEEecc
Confidence            377889999 889999999999997  6775 2  454310                 047875  99999999999999


Q ss_pred             CCCeeCC-CCCCccCC
Q psy5614          78 EGYIGDP-FSSCFPKP   92 (98)
Q Consensus        78 ~Gy~G~g-~~~C~~~~   92 (98)
                      +||+|+. ...|.+.+
T Consensus        71 ~g~~~~~~~~~C~~~~   86 (317)
T 3h5c_B           71 QGYRLGEDHKQCVPHD   86 (317)
T ss_dssp             TTEECCTTSSCCEECS
T ss_pred             cccccccccccccccc
Confidence            9999853 23677653

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A

Probab=98.67  E-value=2e-08  Score=67.57  Aligned_cols=75  Identities=25%  Similarity=0.678  Sum_probs=49.7

Q ss_pred             CCcEEecCCCCeEEcCCCcEeCCCCCcccCcCCC-----CCCCCcee------eCCeec---CCCC--CCCCCCCeeEec
Q psy5614           5 MWIQCSMQSNPSCSCLPNYIGAPPNCRPECVMNS-----ECASNLAC------INEKCR---DPCP--GSCGYNAQCKVI   68 (98)
Q Consensus         5 ~~a~C~~~g~~~C~C~~Gy~Gdg~~C~~eC~~~~-----~C~~~~~C------~~~~C~---d~C~--~~C~~~a~C~~~   68 (98)
                      .++.|+.  .++|+|++||+|  ..|+ +|....     .|....+|      .+..|+   ++|.  .+|.++++|+++
T Consensus        75 ~~g~C~~--~~~C~C~~G~~G--~~C~-~C~~~~~C~~g~C~~~~~C~C~~G~~G~~C~~~~~~C~~~~~C~~~g~C~~~  149 (169)
T 2vj2_A           75 KHGSCKL--PGDCRCQYGWQG--LYCD-KCIPHPGCVHGICNEPWQCLCETNWGGQLCDKDLNYCGTHQPCLNGGTCSNT  149 (169)
T ss_dssp             TTEECSS--TTCCEECTTEES--SSSC-EECCCTTCSSEECSSTTCCEECTTEETTTTCEESCHHHHTCCCCTTCEEEEC
T ss_pred             CCcccCC--CCeeECCCCCCC--CCcc-cCCCCCCCCCCCcCCCCEEeCCCCCCCCcccCCCCCCCCCCCCCCCCEEcCC
Confidence            3444531  478888888887  5664 232222     34333333      134565   5673  789999999996


Q ss_pred             -CCccEEeCCCCCeeCC
Q psy5614          69 -NHTPICTCPEGYIGDP   84 (98)
Q Consensus        69 -~g~~~C~C~~Gy~G~g   84 (98)
                       .++|+|+|++||+|+.
T Consensus       150 ~~~~~~C~C~~G~~G~~  166 (169)
T 2vj2_A          150 GPDKYQCSCPEGYSGPN  166 (169)
T ss_dssp             STTCEEEECCTTCCSTT
T ss_pred             CCCCcEeECCCCCcCcC
Confidence             7899999999999863

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=98.65  E-value=3.8e-08  Score=73.44  Aligned_cols=67  Identities=24%  Similarity=0.538  Sum_probs=50.5

Q ss_pred             CCcEEe-cCCCCeEEcCCCcEe-CCCCCcc--cCcCCCCCCCCceeeCCeecCCCCCCCCCCCeeEecCCccEEeCCCCC
Q psy5614           5 MWIQCS-MQSNPSCSCLPNYIG-APPNCRP--ECVMNSECASNLACINEKCRDPCPGSCGYNAQCKVINHTPICTCPEGY   80 (98)
Q Consensus         5 ~~a~C~-~~g~~~C~C~~Gy~G-dg~~C~~--eC~~~~~C~~~~~C~~~~C~d~C~~~C~~~a~C~~~~g~~~C~C~~Gy   80 (98)
                      -.+.|+ ..++|+|.|++||++ ++..|++  ||...                   .+|..  .|+++.|+|+|.|++||
T Consensus        10 c~~~C~~~~~~y~C~C~~G~~~~~~~~C~dideC~~~-------------------~~C~~--~C~n~~g~~~C~C~~g~   68 (400)
T 3p5b_L           10 CSHVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDP-------------------DTCSQ--LCVNLEGGYKCQCEEGF   68 (400)
T ss_dssp             CSSEEEECSSSEEEECCTTEEECSSSCEEECCCCSTT-------------------SSCSS--CCBCCSSSCBCCCCTTC
T ss_pred             CCCEeECCCCCeEEECCCCCCcCCCCcccCchhhhcc-------------------CCCCC--ccCCCccceeeeccccc
Confidence            346899 999999999999986 3456753  45421                   46754  89999999999999999


Q ss_pred             eeCCC-CCCccCC
Q psy5614          81 IGDPF-SSCFPKP   92 (98)
Q Consensus        81 ~G~g~-~~C~~~~   92 (98)
                      +++.. ..|..+.
T Consensus        69 ~~~~~~~~C~~~~   81 (400)
T 3p5b_L           69 QLDPHTKACKAVG   81 (400)
T ss_dssp             CCCTTTSSCCCST
T ss_pred             cccccccceeecc
Confidence            97532 3687654

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A

Probab=98.51  E-value=1.1e-07  Score=49.44  Aligned_cols=31  Identities=32%  Similarity=0.694  Sum_probs=27.6

Q ss_pred             CCCC-CCCCCCCeeEecCCccEEeCCCCCeeC
Q psy5614          53 DPCP-GSCGYNAQCKVINHTPICTCPEGYIGD   83 (98)
Q Consensus        53 d~C~-~~C~~~a~C~~~~g~~~C~C~~Gy~G~   83 (98)
                      |+|. .+|.++++|++..++|+|.|++||+|.
T Consensus         4 d~C~~~pC~ngg~C~~~~~~~~C~C~~G~~G~   35 (39)
T 1edm_B            4 DQCESNPCLNGGSCKDDINSYECWCPFGFEGK   35 (39)
T ss_dssp             CTTTTCCCCTTCEEEEETTEEEEECCTTCCST
T ss_pred             ccCCCCCCCCCCEeEcCCCceEeECCCCCcCC
Confidence            4563 799999999999999999999999985

>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A

Probab=98.48  E-value=2.1e-08  Score=73.34  Aligned_cols=41  Identities=22%  Similarity=0.617  Sum_probs=35.4

Q ss_pred             CCCC---CCCCCCCeeEecCCccEEeCCCCCeeCCCCCCccCCCC
Q psy5614          53 DPCP---GSCGYNAQCKVINHTPICTCPEGYIGDPFSSCFPKPPE   94 (98)
Q Consensus        53 d~C~---~~C~~~a~C~~~~g~~~C~C~~Gy~G~g~~~C~~~~~~   94 (98)
                      |||.   ++|+.+|.|+|+.|+|.|.|++||.|||. .|.+++.+
T Consensus         6 DEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~GnG~-~C~d~d~P   49 (285)
T 1gl4_A            6 QTCANNRHQCSVHAECRDYATGFCCRCVANYTGNGR-QCVAEGSP   49 (285)
T ss_dssp             -CHHHHGGGSCTTEEEEECSSCEEEEECTTEEECSS-SEEETTCE
T ss_pred             hhccCCCCCCCCCCEeEcCCCCeEEEcCCCCCCCCC-cCCCCCCC
Confidence            5562   78999999999999999999999999998 79887543

>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*

Probab=98.47  E-value=2.2e-09  Score=77.91  Aligned_cols=80  Identities=6%  Similarity=-0.153  Sum_probs=61.3

Q ss_pred             CccCCcEEe-cCCCCeEEcCCCcEeCCCCCc---ccCc-----CCCCCCCCceee-CCeec--CCC-CCCCCCCCeeEec
Q psy5614           2 SWLMWIQCS-MQSNPSCSCLPNYIGAPPNCR---PECV-----MNSECASNLACI-NEKCR--DPC-PGSCGYNAQCKVI   68 (98)
Q Consensus         2 ~~~~~a~C~-~~g~~~C~C~~Gy~Gdg~~C~---~eC~-----~~~~C~~~~~C~-~~~C~--d~C-~~~C~~~a~C~~~   68 (98)
                      .|+.+++|+ ...+|+|+|++||+|  ..|+   ++|+     ...+|.+..+|+ +.+|.  ..| ..+|.++++|++.
T Consensus       106 pC~ngG~C~~~~~sy~C~C~~Gf~G--~~Ce~~~d~C~n~~~c~s~pC~ngg~c~~G~~c~~~i~c~~~~c~ngg~C~dg  183 (267)
T 4fbr_A          106 KSNDGGKTLTGTTTYNGEGPIGFKS--EVTDGDTYSVENQWGGSAAPWHSGGVWVLGTRGKQNVINVDAKSNDGGKTLSG  183 (267)
T ss_dssp             ECSSTTSEEEEEEEETTSCCEEEEE--EECCCCEEEEEEECSSTTSCCEEEEEEECCSSTTSCEEEEEEECSSTTSEEEE
T ss_pred             CCCCCCEEecCCccEEeeCCCCccc--cCCCCCcccccccCCcCCccccCCcceecccccccccccCCCCCCCCCEeeCC
Confidence            367889999 888999999999999  6676   2433     233455555664 45565  223 4789999999999


Q ss_pred             CCccEEeCCCCCeeC
Q psy5614          69 NHTPICTCPEGYIGD   83 (98)
Q Consensus        69 ~g~~~C~C~~Gy~G~   83 (98)
                      ..+|+|.|++||+|.
T Consensus       184 ~~~y~C~Cp~Gf~G~  198 (267)
T 4fbr_A          184 TMTYNGEGPIGFRGT  198 (267)
T ss_dssp             EEEETTSCCEEEEEE
T ss_pred             CCCeEEeCCCCcccc
Confidence            999999999999984

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=98.46  E-value=4e-08  Score=72.83  Aligned_cols=64  Identities=28%  Similarity=0.651  Sum_probs=21.3

Q ss_pred             EEe-cCCCCeEEcCCCcE--eCCCCCcc--cCcCCCCCCCCceeeCCeecCCCCCCCCCCCeeEecCCccEEeCCCCCee
Q psy5614           8 QCS-MQSNPSCSCLPNYI--GAPPNCRP--ECVMNSECASNLACINEKCRDPCPGSCGYNAQCKVINHTPICTCPEGYIG   82 (98)
Q Consensus         8 ~C~-~~g~~~C~C~~Gy~--Gdg~~C~~--eC~~~~~C~~~~~C~~~~C~d~C~~~C~~~a~C~~~~g~~~C~C~~Gy~G   82 (98)
                      .|. ..++|+|.|++||+  +++..|++  ||...                   ++|..  .|+++.++|+|.|++||..
T Consensus        16 ~C~~~~g~~~C~C~~G~~l~~~~~~C~d~~eC~~~-------------------~~C~~--~C~~~~g~~~C~C~~g~~l   74 (386)
T 3v65_B           16 KCQMIRGAVQCTCHTGYRLTEDGRTCQDVNECAEE-------------------GYCSQ--GCTNSEGAFQCWCEAGYEL   74 (386)
T ss_dssp             -------------------------------------------------------CCTT--EEC-----CCEECCTTEEE
T ss_pred             CCcCCCCCcEeECCCCceECCCCCccCccceeCCc-------------------CcccC--cCCCCCCCCeEEECCCceE
Confidence            678 88899999999998  44567753  55421                   46764  4999999999999999984


Q ss_pred             --CCCCCCccCCC
Q psy5614          83 --DPFSSCFPKPP   93 (98)
Q Consensus        83 --~g~~~C~~~~~   93 (98)
                        |+. .|.+..+
T Consensus        75 ~~d~~-~C~~~~~   86 (386)
T 3v65_B           75 RPDRR-SCKALGP   86 (386)
T ss_dssp             CTTSS-CEEECSS
T ss_pred             cCCCC-eECCccc
Confidence              455 7877543

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}

Probab=98.44  E-value=2.4e-07  Score=68.36  Aligned_cols=72  Identities=25%  Similarity=0.686  Sum_probs=40.9

Q ss_pred             ccCCcEEecCCCCeEEcCCCcEeCCCCCcc-cCcCCCCCCCCceee------------CCeec-CCCCCCCCCCCeeEec
Q psy5614           3 WLMWIQCSMQSNPSCSCLPNYIGAPPNCRP-ECVMNSECASNLACI------------NEKCR-DPCPGSCGYNAQCKVI   68 (98)
Q Consensus         3 ~~~~a~C~~~g~~~C~C~~Gy~Gdg~~C~~-eC~~~~~C~~~~~C~------------~~~C~-d~C~~~C~~~a~C~~~   68 (98)
                      |..+++|.  ..++|.|++||+|  ..|+. +|.  ..|.++++|+            +..|+ +.|..+|.++++|++ 
T Consensus       155 C~~~G~C~--~~~~C~C~~G~~G--~~C~~~~C~--~~C~~~G~C~~~~~C~C~~G~~G~~C~~~~C~~~C~~~G~C~~-  227 (324)
T 2ygq_A          155 CRNGGFCN--ERRICECPDGFHG--PHCEKALCT--PRCMNGGLCVTPGFCICPPGFYGVNCDKANCSTTCFNGGTCFY-  227 (324)
T ss_dssp             CCSSCEEC--TTSCEECCTTEES--SSSCEESSS--SCCCTTCEECSSCCEECCTTCBTTTTCBCCCSSCCCSSCCBSC-
T ss_pred             CCCCCEEC--CCCeEECCCCCcC--CCCCCCCCC--CCCCCCCEEcCCCEEeCCCCccCCCcccCcCCCCCCCCCeeCC-
Confidence            55566665  1377888888887  45652 332  1343333332            23444 445566666677754 


Q ss_pred             CCccEEeCCCCCeeC
Q psy5614          69 NHTPICTCPEGYIGD   83 (98)
Q Consensus        69 ~g~~~C~C~~Gy~G~   83 (98)
                        .++|.|++||+|+
T Consensus       228 --~~~C~C~~G~~G~  240 (324)
T 2ygq_A          228 --PGKCICPPGLEGE  240 (324)
T ss_dssp             --SSCBCCCTTCCTT
T ss_pred             --CCeeeCCCCccCC
Confidence              2567777777664

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}

Probab=98.37  E-value=2.2e-07  Score=68.58  Aligned_cols=74  Identities=30%  Similarity=0.749  Sum_probs=22.9

Q ss_pred             ccCCcEEecCCCCeEEcCCCcEeCCCCCcc-cC----cCCCCCCCCcee------eCCeec-CCCCCCCCCCCeeEecCC
Q psy5614           3 WLMWIQCSMQSNPSCSCLPNYIGAPPNCRP-EC----VMNSECASNLAC------INEKCR-DPCPGSCGYNAQCKVINH   70 (98)
Q Consensus         3 ~~~~a~C~~~g~~~C~C~~Gy~Gdg~~C~~-eC----~~~~~C~~~~~C------~~~~C~-d~C~~~C~~~a~C~~~~g   70 (98)
                      |..+++|+.  .++|.|++||+|  ..|+. +|    ..+..|....+|      .+..|+ ++|..+|.++++|+.   
T Consensus       187 C~~~G~C~~--~~~C~C~~G~~G--~~C~~~~C~~~C~~~G~C~~~~~C~C~~G~~G~~C~~~~C~~~C~~~g~C~~---  259 (324)
T 2ygq_A          187 CMNGGLCVT--PGFCICPPGFYG--VNCDKANCSTTCFNGGTCFYPGKCICPPGLEGEQCEISKCPQPCRNGGKCIG---  259 (324)
T ss_dssp             CCTTCEECS--SCCEECCTTCBT--TTTCBCCCSSCCCSSCCBSCSSCBCCCTTCCTTTTC-------------------
T ss_pred             CCCCCEEcC--CCEEeCCCCccC--CCcccCcCCCCCCCCCeeCCCCeeeCCCCccCCCCCcCcCCCcCCCCCEECC---
Confidence            455666752  367888888887  45542 23    222333322222      123444 445556666666663   


Q ss_pred             ccEEeCCCCCeeC
Q psy5614          71 TPICTCPEGYIGD   83 (98)
Q Consensus        71 ~~~C~C~~Gy~G~   83 (98)
                      .++|.|++||+|+
T Consensus       260 ~~~C~C~~G~~G~  272 (324)
T 2ygq_A          260 KSKCKCSKGYQGD  272 (324)
T ss_dssp             -------------
T ss_pred             CCEEECCCCCcCC
Confidence            4567777777665

>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}

Probab=98.29  E-value=4e-07  Score=51.39  Aligned_cols=31  Identities=23%  Similarity=0.547  Sum_probs=25.5

Q ss_pred             CCCC-CCCCCCCeeE-----ecCCccEEeCCCCCeeC
Q psy5614          53 DPCP-GSCGYNAQCK-----VINHTPICTCPEGYIGD   83 (98)
Q Consensus        53 d~C~-~~C~~~a~C~-----~~~g~~~C~C~~Gy~G~   83 (98)
                      |+|. ++|.++++|+     +..++|+|.|++||+|.
T Consensus         9 ~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~   45 (55)
T 3u7u_G            9 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGD   45 (55)
T ss_dssp             CSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEEST
T ss_pred             CCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCC
Confidence            6774 8999999995     45679999999999995

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=98.26  E-value=7.6e-07  Score=72.28  Aligned_cols=63  Identities=22%  Similarity=0.534  Sum_probs=47.5

Q ss_pred             EEe-cCCCCeEEcCCCcEe-CCCCCcc--cCcCCCCCCCCceeeCCeecCCCCCCCCCCCeeEecCCccEEeCCCCCee-
Q psy5614           8 QCS-MQSNPSCSCLPNYIG-APPNCRP--ECVMNSECASNLACINEKCRDPCPGSCGYNAQCKVINHTPICTCPEGYIG-   82 (98)
Q Consensus         8 ~C~-~~g~~~C~C~~Gy~G-dg~~C~~--eC~~~~~C~~~~~C~~~~C~d~C~~~C~~~a~C~~~~g~~~C~C~~Gy~G-   82 (98)
                      .|+ +.++|+|.|++||.+ ++..|++  ||...                   .+|.  +.|+++.|+|+|.|++||.+ 
T Consensus       325 ~C~~~~~~y~C~C~~Gy~l~~g~~C~dideC~~~-------------------~~C~--~~C~n~~gsy~C~C~~Gy~l~  383 (791)
T 3m0c_C          325 VCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDP-------------------DTCS--QLCVNLEGGYKCQCEEGFQLD  383 (791)
T ss_dssp             EEEECSBSEEEECCTTCEEETTTEEECCCCCSSS-------------------SSCT--TTCCBCSSCBCCCCCSSEECC
T ss_pred             cccCCCCCcccCCCCCCccCCCCccccCcccCCC-------------------CCCC--CeeecCCCCceeecCCCCEeC
Confidence            788 888999999999976 5566652  44421                   3564  48999999999999999997 


Q ss_pred             -CCCCCCccCC
Q psy5614          83 -DPFSSCFPKP   92 (98)
Q Consensus        83 -~g~~~C~~~~   92 (98)
                       ++. .|++++
T Consensus       384 ~~~~-~C~~~~  393 (791)
T 3m0c_C          384 PHTK-ACKAVG  393 (791)
T ss_dssp             SSCC-CCEETT
T ss_pred             CCCc-eeeecc
Confidence             444 687764

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A

Probab=98.16  E-value=5e-07  Score=60.70  Aligned_cols=17  Identities=24%  Similarity=0.640  Sum_probs=11.2

Q ss_pred             eeEecCCccEEeCCCCCeeC
Q psy5614          64 QCKVINHTPICTCPEGYIGD   83 (98)
Q Consensus        64 ~C~~~~g~~~C~C~~Gy~G~   83 (98)
                      +|+   ++|+|+|++||+|+
T Consensus       109 ~C~---~~~~C~C~~G~~G~  125 (169)
T 2vj2_A          109 ICN---EPWQCLCETNWGGQ  125 (169)
T ss_dssp             ECS---STTCCEECTTEETT
T ss_pred             CcC---CCCEEeCCCCCCCC
Confidence            555   45677777777764

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=98.15  E-value=1.2e-06  Score=69.89  Aligned_cols=63  Identities=25%  Similarity=0.622  Sum_probs=44.3

Q ss_pred             EEe-cCCCCeEEcCCCcEe-CCCCCcc--cCcCCCCCCCCceeeCCeecCCCCCCCCCCCeeEecCCccEEeCCCCCeeC
Q psy5614           8 QCS-MQSNPSCSCLPNYIG-APPNCRP--ECVMNSECASNLACINEKCRDPCPGSCGYNAQCKVINHTPICTCPEGYIGD   83 (98)
Q Consensus         8 ~C~-~~g~~~C~C~~Gy~G-dg~~C~~--eC~~~~~C~~~~~C~~~~C~d~C~~~C~~~a~C~~~~g~~~C~C~~Gy~G~   83 (98)
                      .|+ ..++|+|.|++||++ ++..|++  ||...                   ++|.  +.|+++.++|+|.|++||+++
T Consensus       307 ~C~~~~~~~~C~C~~G~~~~~~~~C~dideC~~~-------------------~~C~--~~C~n~~g~y~C~C~~G~~~~  365 (699)
T 1n7d_A          307 VCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDP-------------------DTCS--QLCVNLEGGYKCQCEEGFQLD  365 (699)
T ss_dssp             TCCCCTTCCCCCCCSSSCCCSSSCCCCCCCCSSS-------------------SSCT--TTCCBCSSCBCCCCCSSCBCC
T ss_pred             CcccCCCCcEEeCCCCeEcCCCCcccCccccCCC-------------------Cccc--cccccCCCCeeeeeecccccC
Confidence            566 777888888888875 3455642  44321                   4674  589999999999999999975


Q ss_pred             CC-CCCccC
Q psy5614          84 PF-SSCFPK   91 (98)
Q Consensus        84 g~-~~C~~~   91 (98)
                      .. ..|.++
T Consensus       366 ~~~~~C~~~  374 (699)
T 1n7d_A          366 PHTKACKAV  374 (699)
T ss_dssp             SSCCCCBCC
T ss_pred             CCCCccccc
Confidence            31 257654

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A

Probab=98.12  E-value=1.1e-06  Score=52.55  Aligned_cols=38  Identities=32%  Similarity=0.689  Sum_probs=30.5

Q ss_pred             CCCC--CCCCCCCeeEecCCccEEeCCCCCeeCCCCCCccCC
Q psy5614          53 DPCP--GSCGYNAQCKVINHTPICTCPEGYIGDPFSSCFPKP   92 (98)
Q Consensus        53 d~C~--~~C~~~a~C~~~~g~~~C~C~~Gy~G~g~~~C~~~~   92 (98)
                      |+|.  ++|. +++|+++.++|+|.|++||+++|. .|..++
T Consensus         6 deC~~~~~C~-~g~C~n~~g~y~C~C~~Gy~~~g~-~C~did   45 (82)
T 1emn_A            6 DECKEPDVCK-HGQCINTDGSYRCECPFGYILAGN-ECVDTD   45 (82)
T ss_dssp             CSSSSTTSCS-SSEECCCSSCCCEECCTTEEEETT-EEEECC
T ss_pred             ccCCCCCCcC-CCEEEecCCCEEEECCCCeECCCC-ccCCcc
Confidence            5563  6886 589999999999999999998776 576543

>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A

Probab=98.11  E-value=7.8e-07  Score=51.16  Aligned_cols=31  Identities=35%  Similarity=0.824  Sum_probs=27.1

Q ss_pred             CCCC-CCCCCC--CeeEecCCccEEeCCCCCe-eC
Q psy5614          53 DPCP-GSCGYN--AQCKVINHTPICTCPEGYI-GD   83 (98)
Q Consensus        53 d~C~-~~C~~~--a~C~~~~g~~~C~C~~Gy~-G~   83 (98)
                      |+|. +||.++  ++|++..++|+|.|++||+ |.
T Consensus        12 d~C~snPC~nga~gtC~~~~g~y~C~C~~Gy~~G~   46 (61)
T 2k2s_B           12 AACSSNPCGPEAAGTCKETNSGYICRCNQGYRISL   46 (61)
T ss_dssp             CHHHHCSSCSSSCCEEEECSSEEEEECCTTEEEEE
T ss_pred             CcCcCCCCcCCCccccccCCCceEeECCCCCccCC
Confidence            4563 799998  7999999999999999999 84

>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A

Probab=98.09  E-value=3e-06  Score=46.98  Aligned_cols=26  Identities=31%  Similarity=0.612  Sum_probs=23.9

Q ss_pred             CCCCCCeeE--ecCCccEEeCCCCCeeC
Q psy5614          58 SCGYNAQCK--VINHTPICTCPEGYIGD   83 (98)
Q Consensus        58 ~C~~~a~C~--~~~g~~~C~C~~Gy~G~   83 (98)
                      +|.++++|+  +..++|+|.|++||+|.
T Consensus        13 pC~ngg~C~~~~~~~~~~C~C~~G~~G~   40 (53)
T 1egf_A           13 YCLNGGVCMHIESLDSYTCNCVIGYSGD   40 (53)
T ss_dssp             SSCSSCEEEEESSSSCEEEECCTTCCSS
T ss_pred             cCCCCcEEEeeCCCCCEEEECCCCCcCC
Confidence            899999999  67889999999999985

>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1

Probab=98.08  E-value=2.9e-06  Score=45.49  Aligned_cols=26  Identities=27%  Similarity=0.462  Sum_probs=23.4

Q ss_pred             CCCCCCeeE--ecCCccEEeCCCCCeeC
Q psy5614          58 SCGYNAQCK--VINHTPICTCPEGYIGD   83 (98)
Q Consensus        58 ~C~~~a~C~--~~~g~~~C~C~~Gy~G~   83 (98)
                      +|.++++|+  +..++|+|.|++||+|.
T Consensus        10 pC~ngg~C~~~~~~~~~~C~C~~G~~G~   37 (45)
T 1a3p_A           10 YCLNGGVXMHIESLDSYTCNCVIGYSGD   37 (45)
T ss_dssp             CCSSSCEEEECTTTSSEEEECCTTEETT
T ss_pred             CCCCCCEEEeecCCCCEEEEcCCCCcCC
Confidence            899999998  56789999999999985

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*

Probab=98.07  E-value=6.7e-06  Score=62.60  Aligned_cols=70  Identities=21%  Similarity=0.649  Sum_probs=41.9

Q ss_pred             ccCCcEEecCCCCeEEcCCCcEeCCCCCcccCcCCCCCCCCceeeCCeecCCCC--CCCCCCCeeEecCCccEEeCCCCC
Q psy5614           3 WLMWIQCSMQSNPSCSCLPNYIGAPPNCRPECVMNSECASNLACINEKCRDPCP--GSCGYNAQCKVINHTPICTCPEGY   80 (98)
Q Consensus         3 ~~~~a~C~~~g~~~C~C~~Gy~Gdg~~C~~eC~~~~~C~~~~~C~~~~C~d~C~--~~C~~~a~C~~~~g~~~C~C~~Gy   80 (98)
                      |..+++|.. +.++|.|++||+|  ..|+..|....        .+..|.++|.  +.|.+++.|.  .+.|+|.|++||
T Consensus       205 C~~~G~C~~-~~g~C~C~~G~~G--~~Ce~~C~~g~--------~g~~C~~~C~~~~~C~~~g~C~--~~~~~C~C~~G~  271 (423)
T 2gy5_A          205 CMNNGVCHE-DTGECICPPGFMG--RTCEKACELHT--------FGRTCKERCSGQEGCKSYVFCL--PDPYGCSCATGW  271 (423)
T ss_dssp             CCTTCEECT-TTCCEECCTTEES--TTSCEECCTTE--------ESTTSCEECCSTTTTTTCCEEE--TTTTEEECCBTC
T ss_pred             CCCCCEEEC-CCCcEeCCCCccC--CCcccccCCCC--------CCCCcCccCCCCCCCCCCCEEC--CCCCeEEeCCCc
Confidence            455666642 3456777777776  55543332210        0112223343  5788888885  568999999999


Q ss_pred             eeCCC
Q psy5614          81 IGDPF   85 (98)
Q Consensus        81 ~G~g~   85 (98)
                      +|..-
T Consensus       272 ~G~~C  276 (423)
T 2gy5_A          272 KGLQC  276 (423)
T ss_dssp             BSGGG
T ss_pred             ccccc
Confidence            98643

>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}

Probab=98.04  E-value=3.5e-06  Score=49.57  Aligned_cols=23  Identities=17%  Similarity=0.440  Sum_probs=19.7

Q ss_pred             CCCC---CCCCCCCeeEecCCccEEe
Q psy5614          53 DPCP---GSCGYNAQCKVINHTPICT   75 (98)
Q Consensus        53 d~C~---~~C~~~a~C~~~~g~~~C~   75 (98)
                      |||.   ++|..++.|+|+.|+|+|.
T Consensus         4 dEC~~~~~~C~~~~~C~Nt~Gsy~C~   29 (71)
T 2kl7_A            4 NECLTIPEACKGEMKCINHYGGYLCL   29 (71)
T ss_dssp             CCTTCCCCSCTTEEEEEETTCCEEEE
T ss_pred             ccccCCCCCCCCCCEeECCCCCeEec
Confidence            4563   5799899999999999998

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*

Probab=98.03  E-value=1.1e-05  Score=52.08  Aligned_cols=32  Identities=28%  Similarity=0.566  Sum_probs=28.8

Q ss_pred             CCCC-CCCCCCCeeEecCCccEEeCCCCCeeCC
Q psy5614          53 DPCP-GSCGYNAQCKVINHTPICTCPEGYIGDP   84 (98)
Q Consensus        53 d~C~-~~C~~~a~C~~~~g~~~C~C~~Gy~G~g   84 (98)
                      ++|. .+|.++++|++..++|+|.|++||+|..
T Consensus        46 ~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~   78 (135)
T 2vj3_A           46 NECVSNPCQNDATCLDQIGEFQCICMPGYEGVH   78 (135)
T ss_dssp             CTTTTCCCCSSCEEEECSSCEEEECCTTEESSS
T ss_pred             ccCCCCCCCCCCEEeCCCCCceeeCCCCCcCCc
Confidence            7785 7899999999999999999999999853

>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...

Probab=97.98  E-value=5e-06  Score=46.36  Aligned_cols=34  Identities=29%  Similarity=0.899  Sum_probs=27.9

Q ss_pred             CCCCCCCeeEecCCccEEeCCCCCe--eCCCCCCccCCC
Q psy5614          57 GSCGYNAQCKVINHTPICTCPEGYI--GDPFSSCFPKPP   93 (98)
Q Consensus        57 ~~C~~~a~C~~~~g~~~C~C~~Gy~--G~g~~~C~~~~~   93 (98)
                      +.|.  ..|+|+.|+|+|.|++||+  .|+. .|++++.
T Consensus         9 ~~C~--~~C~nt~Gsy~C~C~~Gy~L~~d~~-~C~dide   44 (55)
T 2jkh_L            9 GDCD--QFCHEEQNSVVCSCARGYTLADNGK-ACIPTGP   44 (55)
T ss_dssp             GGCS--SEEEEETTEEEEECCTTEEECTTSS-CEEESSS
T ss_pred             CCcC--cEeEcCCCCeEEeCCCCCEECCCCC-eeccCcc
Confidence            4675  4899999999999999998  6676 6887754

>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D

Probab=97.92  E-value=1e-06  Score=48.72  Aligned_cols=27  Identities=26%  Similarity=0.620  Sum_probs=22.9

Q ss_pred             CCCCCCCeeEec----CCccEEeCCCCCeeC
Q psy5614          57 GSCGYNAQCKVI----NHTPICTCPEGYIGD   83 (98)
Q Consensus        57 ~~C~~~a~C~~~----~g~~~C~C~~Gy~G~   83 (98)
                      ++|.++++|++.    .++|+|.|++||+|+
T Consensus        14 ~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~   44 (52)
T 3ca7_A           14 WYCLNDAHCFAVKIADLPVYSCECAIGFMGQ   44 (52)
T ss_dssp             HTSCTTCEEEEEEETTEEEEEEECCTTEEST
T ss_pred             CcCCCCCEEecCccCCCCCEEEECCCCCcCC
Confidence            478999999973    458999999999995

>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A

Probab=97.89  E-value=4.1e-06  Score=47.84  Aligned_cols=27  Identities=22%  Similarity=0.626  Sum_probs=24.2

Q ss_pred             CCCCCCCeeEe-----cCCccEEeCCCCCeeC
Q psy5614          57 GSCGYNAQCKV-----INHTPICTCPEGYIGD   83 (98)
Q Consensus        57 ~~C~~~a~C~~-----~~g~~~C~C~~Gy~G~   83 (98)
                      .+|.++++|++     ..++|+|.|++||+|.
T Consensus        12 ~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~   43 (63)
T 1hae_A           12 TFCVNGGECFMVKDLSNPSRYLCKCQPGFTGA   43 (63)
T ss_dssp             TTSCTTCEEEEEESSSSSCCEEEECCTTEEST
T ss_pred             CcCCCCcEEecCCccCCCCCEEEECCCCCcCC
Confidence            78999999997     5679999999999985

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*

Probab=97.87  E-value=1e-05  Score=53.23  Aligned_cols=34  Identities=26%  Similarity=0.549  Sum_probs=27.9

Q ss_pred             eec--CCCC-CCCCCCCeeEecCCccEEeCCCCCeeC
Q psy5614          50 KCR--DPCP-GSCGYNAQCKVINHTPICTCPEGYIGD   83 (98)
Q Consensus        50 ~C~--d~C~-~~C~~~a~C~~~~g~~~C~C~~Gy~G~   83 (98)
                      +|+  |+|. ++|.++++|++..++|+|.|++||+|.
T Consensus        44 ~c~dideC~~~pC~n~g~C~~~~~~y~C~C~~G~~G~   80 (146)
T 1x7a_L           44 QYVDGDQCEPNPCLNGGLCKDDINSYECWCQVGFEGK   80 (146)
T ss_dssp             ------CCSSCSSCTTCEEEECSSCEEEECCSSEEST
T ss_pred             cCCCcCcCCCCCCCCCCEeECCCCCEEEecCCCCcCC
Confidence            565  7884 899999999999999999999999974

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1

Probab=97.84  E-value=1.2e-05  Score=48.23  Aligned_cols=37  Identities=32%  Similarity=0.688  Sum_probs=28.1

Q ss_pred             CCCC---CCCCCCCeeEecCCccEEeCCCCCeeC---CCCCCccC
Q psy5614          53 DPCP---GSCGYNAQCKVINHTPICTCPEGYIGD---PFSSCFPK   91 (98)
Q Consensus        53 d~C~---~~C~~~a~C~~~~g~~~C~C~~Gy~G~---g~~~C~~~   91 (98)
                      |||.   ++|. +++|+++.++|+|.|++||+++   +. .|..+
T Consensus         4 deC~~~~~~C~-~g~C~n~~g~y~C~C~~Gy~~~~~~g~-~C~di   46 (86)
T 1lmj_A            4 DECRISPDLCG-RGQCVNTPGDFECKCDEGYESGFMMMK-NCMDI   46 (86)
T ss_dssp             CTTTTCSSTTT-TSCEEEETTEEEECCCSSEEECTTTSS-SEEEC
T ss_pred             ccccCCCCCCC-CCEEECCCCCEEeeCCCCcCccCCCCC-ccCCc
Confidence            4563   4585 4699999999999999999965   44 56544

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*

Probab=97.82  E-value=2.1e-05  Score=59.81  Aligned_cols=59  Identities=25%  Similarity=0.656  Sum_probs=36.7

Q ss_pred             CCCCeEEcCCCcEeCCCCCcccCcCCCCCCCCceeeCCeecCCCCCCCCCCCeeEecCCccEEeCCCCCeeCCC
Q psy5614          12 QSNPSCSCLPNYIGAPPNCRPECVMNSECASNLACINEKCRDPCPGSCGYNAQCKVINHTPICTCPEGYIGDPF   85 (98)
Q Consensus        12 ~g~~~C~C~~Gy~Gdg~~C~~eC~~~~~C~~~~~C~~~~C~d~C~~~C~~~a~C~~~~g~~~C~C~~Gy~G~g~   85 (98)
                      .+.|+|.|++||+|  ..|+.+|....        .+..|..+|  +|.+++.|.+..   .|.|++||+|+.-
T Consensus       260 ~~~~~C~C~~G~~G--~~C~~~C~~G~--------~G~~C~~~C--~C~ngg~C~~~~---~C~C~~G~~G~~C  318 (423)
T 2gy5_A          260 PDPYGCSCATGWKG--LQCNEACHPGF--------YGPDCKLRC--SCNNGEMCDRFQ---GCLCSPGWQGLQC  318 (423)
T ss_dssp             TTTTEEECCBTCBS--GGGCBCCCTTB--------CSBTTCCBC--CCTTCCEEETTT---EEECCTTCBSTTS
T ss_pred             CCCCeEEeCCCccc--ccccCccCCCC--------cCCcccccc--cCCCCCEecCCC---ceECCCCCcCCCC
Confidence            34677778778776  56654443321        011122122  688899998764   3999999999653

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*

Probab=97.80  E-value=1e-05  Score=50.98  Aligned_cols=28  Identities=21%  Similarity=0.382  Sum_probs=25.4

Q ss_pred             CCCCCCCeeEecCCccEEeCCCCCeeCC
Q psy5614          57 GSCGYNAQCKVINHTPICTCPEGYIGDP   84 (98)
Q Consensus        57 ~~C~~~a~C~~~~g~~~C~C~~Gy~G~g   84 (98)
                      +.|.++++|+++.++|+|.|++||+|+.
T Consensus        20 ~~C~~~g~C~~~~~~y~C~C~~G~~G~~   47 (114)
T 1aut_L           20 SLCCGHGTCIDGIGSFSCDCRSGWEGRF   47 (114)
T ss_dssp             STTTTSEEECCCSSCCCEEECTTEESTT
T ss_pred             ccCCCcCCCCCCCCCcEeeCCCCCcCCC
Confidence            4499999999999999999999999864

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}

Probab=97.79  E-value=5.2e-06  Score=50.01  Aligned_cols=37  Identities=41%  Similarity=0.724  Sum_probs=28.3

Q ss_pred             CCCC-CC--CCCCCeeEecCCccEEeCCCCCeeC--CCCCCccC
Q psy5614          53 DPCP-GS--CGYNAQCKVINHTPICTCPEGYIGD--PFSSCFPK   91 (98)
Q Consensus        53 d~C~-~~--C~~~a~C~~~~g~~~C~C~~Gy~G~--g~~~C~~~   91 (98)
                      |+|. .+  | ++++|+++.++|+|.|++||+++  +. .|..+
T Consensus         4 deC~~~~~~C-~~~~C~n~~g~y~C~C~~G~~~~~~g~-~C~di   45 (87)
T 1z6c_A            4 DECSLKPSIC-GTAVCKNIPGDFECECPEGYRYNLKSK-SCEDI   45 (87)
T ss_dssp             CSSSSSSSSB-TTSSCCCBTTBCCCSSSTTCEEETTTT-EEECC
T ss_pred             ccccCCCCCC-CCCEeECCCCCEEEECCCCceECCCCC-cCCCc
Confidence            4563 33  8 78999999999999999999975  43 56543

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*

Probab=97.79  E-value=6.3e-06  Score=66.32  Aligned_cols=77  Identities=23%  Similarity=0.579  Sum_probs=46.3

Q ss_pred             ccCCcEEe-cCCCCe---EEcCCCcEeCCCCCc-----------ccCcCC---CCCCCCceeeCC---------------
Q psy5614           3 WLMWIQCS-MQSNPS---CSCLPNYIGAPPNCR-----------PECVMN---SECASNLACINE---------------   49 (98)
Q Consensus         3 ~~~~a~C~-~~g~~~---C~C~~Gy~Gdg~~C~-----------~eC~~~---~~C~~~~~C~~~---------------   49 (98)
                      |..++.|. ..|.+.   |.|.+||+|  ..|+           ++|...   ..|..+++|+..               
T Consensus       442 c~n~~~C~~g~G~~~~G~C~C~~Gy~G--~~Ce~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~g~C~C~~~~~~Gy~G~  519 (690)
T 3fcs_B          442 EPNSHRCNNGNGTFECGVCRCGPGWLG--SQCECSEEDYRPSQQDECSPREGQPVCSQRGECLCGQCVCHSSDFGKITGK  519 (690)
T ss_dssp             CTTCTTTTTTSEEEETTEEEECTTCCS--SSSCCSCC------CCCCSSSSSSCGGGGSEEECSSSEEECCCSSCCCBST
T ss_pred             CCCCCcccCCCCeEeCCceEeCCCccC--CceeeccCccCCccCCcCCCCCCCCCCCCCCEEECCeeEeecCCCCCeeCC
Confidence            44556676 666676   888888887  4553           135432   236555555333               


Q ss_pred             eec---CCCC----CCCCCCCeeEecCCccEEeCCCCCeeCCC
Q psy5614          50 KCR---DPCP----GSCGYNAQCKVINHTPICTCPEGYIGDPF   85 (98)
Q Consensus        50 ~C~---d~C~----~~C~~~a~C~~~~g~~~C~C~~Gy~G~g~   85 (98)
                      .|+   ++|.    .+|..++.|++    ++|.|++||+|+..
T Consensus       520 ~Ce~~~~~C~~~~~~~C~~~G~C~~----g~C~C~~Gy~G~~C  558 (690)
T 3fcs_B          520 YCECDDFSCVRYKGEMCSGHGQCSC----GDCLCDSDWTGYYC  558 (690)
T ss_dssp             TSCBCSSCCCBSSSSBGGGSEEEET----TEEEECTTEESSSS
T ss_pred             CcCcccCcCcCCCCCCCCCCCEecC----CeeECcCCCcCCCC
Confidence            343   3453    25666777764    67888888888654

>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A

Probab=97.78  E-value=4.7e-05  Score=47.09  Aligned_cols=62  Identities=21%  Similarity=0.521  Sum_probs=49.8

Q ss_pred             CccCCcEEe--cCCCCeEEcCCCcEeCCCCCcc----cCcCCCCCCCCceeeCCeecCCCCCCCCCCCeeEecC-CccEE
Q psy5614           2 SWLMWIQCS--MQSNPSCSCLPNYIGAPPNCRP----ECVMNSECASNLACINEKCRDPCPGSCGYNAQCKVIN-HTPIC   74 (98)
Q Consensus         2 ~~~~~a~C~--~~g~~~C~C~~Gy~Gdg~~C~~----eC~~~~~C~~~~~C~~~~C~d~C~~~C~~~a~C~~~~-g~~~C   74 (98)
                      .|..||.|.  .++...|+|+.+|.-++..|..    .|..+.                  +.|+++|.|.... ....|
T Consensus        11 kcp~NA~Cyr~~dg~EecRCllnykk~~~kCV~~~~~~C~~NN------------------GGCd~nA~C~~~~~~kIvC   72 (95)
T 1b9w_A           11 NVPENAACYRYLDGTEEWRCLLYFKEDAGKCVPAPNMTCKDKN------------------GGCAPEAECKMNDKNEIVC   72 (95)
T ss_dssp             CCCTTEEEEECTTSCEEEEECTTEEEETTEEEECTTCCTTTGG------------------GGSCTTSEEEECTTSCEEE
T ss_pred             CCCCCcCeEEEcCCCEEEEEECCeEecCCEEEcCCCCCccccC------------------CCcCCCcceeecCCCcEEE
Confidence            377899999  6789999999999887777762    233221                  6899999999988 68899


Q ss_pred             eCCCCCe
Q psy5614          75 TCPEGYI   81 (98)
Q Consensus        75 ~C~~Gy~   81 (98)
                      +|+..|.
T Consensus        73 ~C~~~~~   79 (95)
T 1b9w_A           73 KCTKEGS   79 (95)
T ss_dssp             ECCSTTE
T ss_pred             ECCCCCC
Confidence            9998864

>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1

Probab=97.75  E-value=2.9e-05  Score=42.30  Aligned_cols=31  Identities=26%  Similarity=0.547  Sum_probs=24.6

Q ss_pred             CCCCCCCeeEecCCccEEeCCCCCeeC--CCCCCcc
Q psy5614          57 GSCGYNAQCKVINHTPICTCPEGYIGD--PFSSCFP   90 (98)
Q Consensus        57 ~~C~~~a~C~~~~g~~~C~C~~Gy~G~--g~~~C~~   90 (98)
                      ++|.  +.|+|+.|+|+|.|++||+++  +. .|.+
T Consensus        20 ~~C~--~~C~n~~Gsy~C~C~~Gy~~~~d~~-~C~~   52 (53)
T 1apq_A           20 PQCQ--HLCHNYVGGYFCSCRPGYELQEDRH-SCQA   52 (53)
T ss_dssp             CTTS--SEEEEETTEEEEECSTTCEECTTSS-CEEC
T ss_pred             CCCC--CEeECCCCCeEEECCCCCeECCCCC-ccCC
Confidence            3575  499999999999999999964  44 5653

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A

Probab=97.73  E-value=1.9e-05  Score=52.19  Aligned_cols=38  Identities=21%  Similarity=0.593  Sum_probs=30.1

Q ss_pred             CCCC--CCCCCCCeeEecCCccEEeCCCCCeeC--CCCCCccCC
Q psy5614          53 DPCP--GSCGYNAQCKVINHTPICTCPEGYIGD--PFSSCFPKP   92 (98)
Q Consensus        53 d~C~--~~C~~~a~C~~~~g~~~C~C~~Gy~G~--g~~~C~~~~   92 (98)
                      |||.  ++|. +++|+++.++|+|+|++||+++  |. .|..++
T Consensus         4 deC~~~~~C~-~~~C~n~~gsy~C~C~~Gy~~~~~g~-~C~d~~   45 (162)
T 1uzk_A            4 NECLDPTTCI-SGNCVNTPGSYICDCPPDFELNPTRV-GCVDTR   45 (162)
T ss_dssp             CGGGSTTSSB-TSEEEEETTEEEEECCTTCEECTTSS-BEECCC
T ss_pred             ccCCCCCCCC-CCEeECCCCCEEEeCCCCCeECCCCC-cccCCC
Confidence            4552  6886 7999999999999999999974  55 676543

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...

Probab=97.71  E-value=1.8e-05  Score=51.64  Aligned_cols=31  Identities=29%  Similarity=0.699  Sum_probs=28.4

Q ss_pred             CCCC-CCCCCCCeeEecCCccEEeCCCCCeeC
Q psy5614          53 DPCP-GSCGYNAQCKVINHTPICTCPEGYIGD   83 (98)
Q Consensus        53 d~C~-~~C~~~a~C~~~~g~~~C~C~~Gy~G~   83 (98)
                      |+|. ++|.++++|+++.++|+|.|++||+|.
T Consensus        48 d~C~~~pC~n~g~C~~~~g~y~C~C~~G~~G~   79 (142)
T 2c4f_L           48 DQCASSPCQNGGSCKDQLQSYICFCLPAFEGR   79 (142)
T ss_dssp             CGGGGCCCCTTCEEEEETTEEEEECCTTEEST
T ss_pred             CcCcCCCcCCCCEEeCCCCCEEeeCCCCccCC
Confidence            6784 899999999999999999999999975

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}

Probab=97.66  E-value=2.2e-05  Score=51.16  Aligned_cols=31  Identities=35%  Similarity=0.688  Sum_probs=26.4

Q ss_pred             CCCC-CCCCCCCeeEecCCccEEeCCCCCeeCC
Q psy5614          53 DPCP-GSCGYNAQCKVINHTPICTCPEGYIGDP   84 (98)
Q Consensus        53 d~C~-~~C~~~a~C~~~~g~~~C~C~~Gy~G~g   84 (98)
                      |+|. ++|. +++|+++.++|+|+|++||+|+.
T Consensus         5 deC~~~pC~-ng~C~n~~g~y~C~C~~G~~g~~   36 (147)
T 2w86_A            5 DECESSPCI-NGVCKNSPGSFICECSSESTLDP   36 (147)
T ss_dssp             CGGGGCCSB-TSEEEEETTEEEEECCTTEEECT
T ss_pred             ccCcCCCCC-CCEeECCCCCEEeECCCCcccCC
Confidence            4563 6897 58999999999999999999874

>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A

Probab=97.62  E-value=2.7e-05  Score=42.04  Aligned_cols=26  Identities=35%  Similarity=0.741  Sum_probs=22.5

Q ss_pred             CCCCCCCeeEecC--CccEEeCCCCCeeC
Q psy5614          57 GSCGYNAQCKVIN--HTPICTCPEGYIGD   83 (98)
Q Consensus        57 ~~C~~~a~C~~~~--g~~~C~C~~Gy~G~   83 (98)
                      ++|.+ ++|++..  ++|+|.|++||+|.
T Consensus        12 ~pC~n-G~C~~~~~~~~~~C~C~~GytG~   39 (46)
T 1k36_A           12 GYCLH-GQCIYLVDMSQNYCRCEVGYTGV   39 (46)
T ss_dssp             SSCSS-EEEEEETTTTEEEEEECTTCSST
T ss_pred             CCCCC-CEeeccCCCCCEEEECCCCCccC
Confidence            68988 7999865  68999999999985

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*

Probab=97.60  E-value=0.00022  Score=57.43  Aligned_cols=75  Identities=25%  Similarity=0.574  Sum_probs=53.6

Q ss_pred             ccCCcEEecCCCCeEEcC----CCcEeCCCCCc---ccCcCC--CCCCCCceeeCCeec----------------CCCC-
Q psy5614           3 WLMWIQCSMQSNPSCSCL----PNYIGAPPNCR---PECVMN--SECASNLACINEKCR----------------DPCP-   56 (98)
Q Consensus         3 ~~~~a~C~~~g~~~C~C~----~Gy~Gdg~~C~---~eC~~~--~~C~~~~~C~~~~C~----------------d~C~-   56 (98)
                      |..+++|+   .++|.|.    +||+|  ..|+   .+|...  ..|..+++|....|.                ++|. 
T Consensus       495 Cs~~G~C~---~g~C~C~~~~~~Gy~G--~~Ce~~~~~C~~~~~~~C~~~G~C~~g~C~C~~Gy~G~~CeC~~~~~~C~~  569 (690)
T 3fcs_B          495 CSQRGECL---CGQCVCHSSDFGKITG--KYCECDDFSCVRYKGEMCSGHGQCSCGDCLCDSDWTGYYCNCTTRTDTCMS  569 (690)
T ss_dssp             GGGSEEEC---SSSEEECCCSSCCCBS--TTSCBCSSCCCBSSSSBGGGSEEEETTEEEECTTEESSSSCEECCCTTTBC
T ss_pred             CCCCCEEE---CCeeEeecCCCCCeeC--CCcCcccCcCcCCCCCCCCCCCEecCCeeECcCCCcCCCCccCCCCCcccC
Confidence            66677775   3689999    99998  6775   357642  467777777544433                4563 


Q ss_pred             ---CCCCCCCeeEecCCccEEeC-CCCCeeCCCC
Q psy5614          57 ---GSCGYNAQCKVINHTPICTC-PEGYIGDPFS   86 (98)
Q Consensus        57 ---~~C~~~a~C~~~~g~~~C~C-~~Gy~G~g~~   86 (98)
                         .+|.++++|++    .+|.| ++||+|+.-.
T Consensus       570 ~~g~~C~~~G~C~~----g~C~C~~~Gy~G~~Ce  599 (690)
T 3fcs_B          570 SNGLLCSGRGKCEC----GSCVCIQPGSYGDTCE  599 (690)
T ss_dssp             TTSSBTSSSCEEET----TEEECCSTTCBSTTSC
T ss_pred             CCCCCCCCCCEEeC----CEEECCCCCccCCCcC
Confidence               46888999975    38999 9999997543

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A

Probab=97.56  E-value=4.1e-05  Score=47.96  Aligned_cols=32  Identities=22%  Similarity=0.523  Sum_probs=24.4

Q ss_pred             CCCCCCeeEecCCccEEeCCCCCee-CCCCCCccCC
Q psy5614          58 SCGYNAQCKVINHTPICTCPEGYIG-DPFSSCFPKP   92 (98)
Q Consensus        58 ~C~~~a~C~~~~g~~~C~C~~Gy~G-~g~~~C~~~~   92 (98)
                      .|.  +.|+++.++|+|.|++||+| ++. .|..++
T Consensus        38 ~C~--~~C~n~~g~y~C~C~~Gy~g~~g~-~C~did   70 (107)
T 2w2n_E           38 GCS--YVCNDLKIGYECLCPDGFQLVAQR-RCEDID   70 (107)
T ss_dssp             GCS--SEEECCSBSCEEECCTTCEEETTT-EEEC--
T ss_pred             CCC--CEeEeCCCCeEEECCCCccccCCC-cccccc
Confidence            564  68999999999999999999 343 576543

>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A

Probab=97.51  E-value=4.5e-05  Score=55.72  Aligned_cols=31  Identities=23%  Similarity=0.625  Sum_probs=28.8

Q ss_pred             CccCCcEEe-cCCCCeEEcCCCcEeCCCCCcc
Q psy5614           2 SWLMWIQCS-MQSNPSCSCLPNYIGAPPNCRP   32 (98)
Q Consensus         2 ~~~~~a~C~-~~g~~~C~C~~Gy~Gdg~~C~~   32 (98)
                      .|+.+|.|+ +.|+|+|.|++||.|||..|.+
T Consensus        14 ~C~~~a~C~Nt~Gsy~C~C~~Gy~GnG~~C~d   45 (285)
T 1gl4_A           14 QCSVHAECRDYATGFCCRCVANYTGNGRQCVA   45 (285)
T ss_dssp             GSCTTEEEEECSSCEEEEECTTEEECSSSEEE
T ss_pred             CCCCCCEeEcCCCCeEEEcCCCCCCCCCcCCC
Confidence            488999999 9999999999999999999975

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...

Probab=97.48  E-value=1.6e-05  Score=51.47  Aligned_cols=34  Identities=35%  Similarity=0.740  Sum_probs=0.0

Q ss_pred             eec--CCCC-CCCCCCCeeEecCCccEEeCCCCCeeC
Q psy5614          50 KCR--DPCP-GSCGYNAQCKVINHTPICTCPEGYIGD   83 (98)
Q Consensus        50 ~C~--d~C~-~~C~~~a~C~~~~g~~~C~C~~Gy~G~   83 (98)
                      .|+  |+|. ++|.++++|+++.++|+|.|++||+|.
T Consensus        38 ~c~d~d~C~~~pC~n~g~C~~~~~~y~C~C~~G~~G~   74 (134)
T 2vh0_B           38 KYKDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGK   74 (134)
T ss_dssp             -------------------------------------
T ss_pred             cCCCcCcCCCCCCCCcCCcccCCCCEEeeCCCCccCC
Confidence            455  7784 799999999999999999999999975

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*

Probab=97.46  E-value=1.7e-05  Score=54.85  Aligned_cols=34  Identities=35%  Similarity=0.740  Sum_probs=0.0

Q ss_pred             eec--CCCC-CCCCCCCeeEecCCccEEeCCCCCeeC
Q psy5614          50 KCR--DPCP-GSCGYNAQCKVINHTPICTCPEGYIGD   83 (98)
Q Consensus        50 ~C~--d~C~-~~C~~~a~C~~~~g~~~C~C~~Gy~G~   83 (98)
                      .|+  |+|. ++|.++++|++..++|+|.|++||+|.
T Consensus        38 ~c~dideC~~~pC~ngg~C~n~~g~y~C~C~~Gf~G~   74 (195)
T 1nfu_B           38 KYKDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGK   74 (195)
T ss_dssp             -------------------------------------
T ss_pred             cCCCCcccCCCCCCCCCEeECCCCCeeEeCCCCceec
Confidence            455  7884 899999999999999999999999975

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*

Probab=97.44  E-value=8.2e-05  Score=59.42  Aligned_cols=39  Identities=31%  Similarity=0.663  Sum_probs=32.2

Q ss_pred             CCCC-CCCCCCCeeEecCC-ccEE-eCCCCCeeCCCCCCccCC
Q psy5614          53 DPCP-GSCGYNAQCKVINH-TPIC-TCPEGYIGDPFSSCFPKP   92 (98)
Q Consensus        53 d~C~-~~C~~~a~C~~~~g-~~~C-~C~~Gy~G~g~~~C~~~~   92 (98)
                      |+|. ++|.++++|+++.+ +|+| .|++||+|++. .|..++
T Consensus         4 DeC~~nPC~~gg~C~n~~~Gsy~C~~C~~GytGdg~-~CeDiD   45 (634)
T 1yo8_A            4 DGCLSNPCFPGAQCSSFPDGSWSCGFCPVGFLGNGT-HCEDLD   45 (634)
T ss_dssp             CGGGGCCSCTTCCEEECTTSCEEECCCCTTBCSCSS-SCCBCC
T ss_pred             cccCCCCCCCCCEEecCCCCCeECCcCCCccCCCCC-Cccccc
Confidence            4563 79999999999875 5999 99999999987 687543

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A

Probab=97.44  E-value=6.3e-05  Score=38.65  Aligned_cols=27  Identities=26%  Similarity=0.448  Sum_probs=23.4

Q ss_pred             CccCCcEEe-cCCCCeEEcCCCcEeCCCCC
Q psy5614           2 SWLMWIQCS-MQSNPSCSCLPNYIGAPPNC   30 (98)
Q Consensus         2 ~~~~~a~C~-~~g~~~C~C~~Gy~Gdg~~C   30 (98)
                      .|..+++|+ ..++|+|.|++||+|  ..|
T Consensus        10 pC~ngg~C~~~~~~~~C~C~~G~~G--~~C   37 (39)
T 1edm_B           10 PCLNGGSCKDDINSYECWCPFGFEG--KNC   37 (39)
T ss_dssp             CCCTTCEEEEETTEEEEECCTTCCS--TTS
T ss_pred             CCCCCCEeEcCCCceEeECCCCCcC--Ccc
Confidence            477889999 999999999999998  455

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}

Probab=97.42  E-value=6.2e-05  Score=48.38  Aligned_cols=32  Identities=25%  Similarity=0.619  Sum_probs=23.9

Q ss_pred             CCCC-CCCCCCCeeEecC--CccEEeCCCCCeeCC
Q psy5614          53 DPCP-GSCGYNAQCKVIN--HTPICTCPEGYIGDP   84 (98)
Q Consensus        53 d~C~-~~C~~~a~C~~~~--g~~~C~C~~Gy~G~g   84 (98)
                      |+|. ++|.++++|++..  ++|+|+|++||+|+.
T Consensus         1 d~C~~~pC~~~g~C~~~~~~g~~~C~C~~G~~G~~   35 (143)
T 4d90_A            1 DICDPNPCENGGICLPGLADGSFSCECPDGFTDPN   35 (143)
T ss_dssp             --CCSCCCGGGCEEEC-----CCEEECCTTCCTTT
T ss_pred             CcCCCCcCCCCCEeeCCCCCCCEEeECCCCCCCCC
Confidence            4564 7899999999865  689999999999864

>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*

Probab=97.42  E-value=3.9e-05  Score=42.61  Aligned_cols=27  Identities=33%  Similarity=0.732  Sum_probs=23.7

Q ss_pred             CCCCCCCeeE--ecCCccEEeCCCCCeeC
Q psy5614          57 GSCGYNAQCK--VINHTPICTCPEGYIGD   83 (98)
Q Consensus        57 ~~C~~~a~C~--~~~g~~~C~C~~Gy~G~   83 (98)
                      ++|.++++|+  +..++|+|.|++||+|.
T Consensus        12 ~pC~nGG~C~~~~~~~~~~C~C~~GytG~   40 (53)
T 1nql_B           12 GYCLHDGVCMYIEALDKYACNCVVGYIGE   40 (53)
T ss_dssp             CEECTTCEEEEETTTTEEEEEECTTEEST
T ss_pred             CCCCCCeEEeeecCCCCEEEecCCCCcCC
Confidence            6899999998  45678999999999995

>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A

Probab=97.39  E-value=5.5e-05  Score=49.51  Aligned_cols=41  Identities=24%  Similarity=0.568  Sum_probs=34.2

Q ss_pred             Ceec-CCCC-CCCCCCCeeEecCCccEEeCCCCCeeCCCCCCccCC
Q psy5614          49 EKCR-DPCP-GSCGYNAQCKVINHTPICTCPEGYIGDPFSSCFPKP   92 (98)
Q Consensus        49 ~~C~-d~C~-~~C~~~a~C~~~~g~~~C~C~~Gy~G~g~~~C~~~~   92 (98)
                      .+|+ ++|. .+|.++++|++..++|+|+|++||.|+   .|..++
T Consensus       115 fICe~~~c~~~~C~~~g~C~~~~~~~~c~C~~g~~G~---~Ce~~~  157 (162)
T 1g1s_A          115 ALCYTASCQDMSCSKQGECLETIGNYTCSCYPGFYGP---ECEYVR  157 (162)
T ss_dssp             EEEEECCCCTTGGGGSEEEEECSSSEEEEECTTEEST---TSCEEC
T ss_pred             EEEEeCCCcCCCCCCCCEEecCCCCceEeCCCCCcCc---ccccCc
Confidence            4677 7784 789999999999999999999999985   476654

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=97.23  E-value=0.00013  Score=55.94  Aligned_cols=33  Identities=27%  Similarity=0.715  Sum_probs=1.4

Q ss_pred             CCCCCCCCCCCeeEecCCccEEeCCCCCeeCCCCCCccC
Q psy5614          53 DPCPGSCGYNAQCKVINHTPICTCPEGYIGDPFSSCFPK   91 (98)
Q Consensus        53 d~C~~~C~~~a~C~~~~g~~~C~C~~Gy~G~g~~~C~~~   91 (98)
                      ++|..+|.++++|++.   ++|.|++||+|.   .|...
T Consensus       424 ~~C~~~C~~~g~C~~~---~~C~C~~G~~G~---~C~~~  456 (463)
T 2wg3_C          424 AKCEPACRHGGVCVRP---NKCLCKKGYLGP---QCEQV  456 (463)
T ss_dssp             ECC------------------------------------
T ss_pred             CcCCCCCCCCCEECCC---CEEECCCCcccC---CCCCC
Confidence            4454578888999865   689999999984   46544

>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1

Probab=97.22  E-value=7.4e-05  Score=40.98  Aligned_cols=34  Identities=29%  Similarity=0.771  Sum_probs=27.1

Q ss_pred             CCCCCCCeeEecCCccEEeCCCCCe--eCCCCCCccCCC
Q psy5614          57 GSCGYNAQCKVINHTPICTCPEGYI--GDPFSSCFPKPP   93 (98)
Q Consensus        57 ~~C~~~a~C~~~~g~~~C~C~~Gy~--G~g~~~C~~~~~   93 (98)
                      +.|.  ..|+++.|+|+|.|++||+  .|+. .|++++.
T Consensus         6 g~C~--~~C~n~~gs~~C~C~~Gy~L~~d~~-tC~dide   41 (51)
T 1kig_L            6 GGCD--QFCREERSEVRCSCAHGYVLGDDSK-SCVSTER   41 (51)
T ss_dssp             TSSS--SCCCEETTEECCCCCTTEEECTTSS-CEEECSS
T ss_pred             CCcC--CEeEcCCCCeEEeCCCCcEECCCCC-ccccCCc
Confidence            3564  3699999999999999998  6776 7887653

>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A

Probab=97.15  E-value=0.00064  Score=47.57  Aligned_cols=73  Identities=26%  Similarity=0.546  Sum_probs=47.6

Q ss_pred             ccCCcEEecCCCCeEEcCCCcEeCCCCCc-c-----------cCcC---CCCCCCCceeeCC-----------------e
Q psy5614           3 WLMWIQCSMQSNPSCSCLPNYIGAPPNCR-P-----------ECVM---NSECASNLACINE-----------------K   50 (98)
Q Consensus         3 ~~~~a~C~~~g~~~C~C~~Gy~Gdg~~C~-~-----------eC~~---~~~C~~~~~C~~~-----------------~   50 (98)
                      |..+++|+   ...|.|.+||+|  ..|+ +           .|..   ...|..+++|+..                 .
T Consensus        98 Csg~G~C~---~g~C~C~~G~~G--~~Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~~g~C~C~~gw~~~~~~~G~~  172 (217)
T 2p28_B           98 CHGKGFLE---CGICRCDTGYIG--KNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCGQCLCHTSDVPGKLIYGQY  172 (217)
T ss_dssp             TTTSEEEE---TTEEEECTTEES--TTSCEECCCCC-GGGGGGGBSSTTSCBGGGTEEEETTEEEECCCCSTTCCEESTT
T ss_pred             cCCCceEE---CCEEECCCCccC--CcccccCcccccccCCCcCCCCCCCCCCCCCCEEeCCceECCCCCCCcccEECCC
Confidence            56677775   258999999999  5664 1           2432   2356666666433                 3


Q ss_pred             ec---CCCCC----CCCCC--CeeEecCCccEEeCCCCCeeCC
Q psy5614          51 CR---DPCPG----SCGYN--AQCKVINHTPICTCPEGYIGDP   84 (98)
Q Consensus        51 C~---d~C~~----~C~~~--a~C~~~~g~~~C~C~~Gy~G~g   84 (98)
                      |+   +.|..    +|..+  ++|+.    .+|.|.+||+|+.
T Consensus       173 Ce~~~~~C~~~~g~~C~~~~~G~C~~----g~C~C~~G~~G~~  211 (217)
T 2p28_B          173 CECDTINCERYNGQVCGGPGRGLCFC----GKCRCHPGFEGSA  211 (217)
T ss_dssp             SCEESSCSCEETTEETTCTTTEEEET----TEEEECTTEESTT
T ss_pred             cccCCccCCCCCCCCCCCCCCcEEeC----CeeECCCCCccCC
Confidence            43   34642    57776  88884    3899999999963

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*

Probab=97.07  E-value=0.00049  Score=55.43  Aligned_cols=76  Identities=21%  Similarity=0.537  Sum_probs=52.2

Q ss_pred             ccCCcEEecCCCCeEEcC------CCcEeCCCCCc---ccCcC--CCCCCC--CceeeCC-----------eec-----C
Q psy5614           3 WLMWIQCSMQSNPSCSCL------PNYIGAPPNCR---PECVM--NSECAS--NLACINE-----------KCR-----D   53 (98)
Q Consensus         3 ~~~~a~C~~~g~~~C~C~------~Gy~Gdg~~C~---~eC~~--~~~C~~--~~~C~~~-----------~C~-----d   53 (98)
                      |..+++|+   ..+|.|.      +||.|  ..|+   .+|..  ...|..  +++|...           .|+     +
T Consensus       484 Cs~~G~C~---~G~C~C~~~~~~~~G~~G--~~Ce~~~~~C~~~~~~~C~~~~~G~C~~g~C~C~~G~~G~~Cec~~~~~  558 (687)
T 3k6s_B          484 CSGLGDCV---CGQCLCHTSDVPGKLIYG--QYCECDTINCERYNGQVCGGPGRGLCFCGKCRCHPGFEGSACQCERTTE  558 (687)
T ss_dssp             GGSSEEEE---TTEEEECCCCSTTCCEES--TTSCEESSCSCEETTEETSHHHHEEEETTEEEECTTCCSTTSCSCCSSC
T ss_pred             CCCCCEEe---CCEEEcCCCCCCCCCccc--cccccccccccCCCCcCcCCCCCCeEECCEEEcCCCCcCCCCccCCCCC
Confidence            66778886   2389999      99999  6775   35653  235776  6666543           343     3


Q ss_pred             CCC----CCCCCCCeeEecCCccEEeCCCCCeeCCCCC
Q psy5614          54 PCP----GSCGYNAQCKVINHTPICTCPEGYIGDPFSS   87 (98)
Q Consensus        54 ~C~----~~C~~~a~C~~~~g~~~C~C~~Gy~G~g~~~   87 (98)
                      .|.    .+|..++.|+.    .+|.|++||+|+.-..
T Consensus       559 ~C~~~~g~~Cs~~G~C~~----g~C~C~~Gy~G~~Ce~  592 (687)
T 3k6s_B          559 GCLNPRRVECSGRGRCRC----NVCECHSGYQLPLCQE  592 (687)
T ss_dssp             TTBCTTCSBTSSSCCBCS----SCBCCSTTCCTTTTCC
T ss_pred             CCCCCCCCCCCCCCcCCC----CEEECCCCCcCCCCCC
Confidence            463    26888888875    5799999999976433

>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A

Probab=97.07  E-value=0.00029  Score=44.01  Aligned_cols=35  Identities=23%  Similarity=0.560  Sum_probs=30.6

Q ss_pred             CCCCCCCeeEe-cCCccEEeCCCCCeeCCCCCCccCC
Q psy5614          57 GSCGYNAQCKV-INHTPICTCPEGYIGDPFSSCFPKP   92 (98)
Q Consensus        57 ~~C~~~a~C~~-~~g~~~C~C~~Gy~G~g~~~C~~~~   92 (98)
                      ..|.+||.|.. ..+.+.|.|.+||.|||+ .|++++
T Consensus        10 ~~C~~NA~C~r~~~g~e~C~C~~gy~gdg~-~Cv~~~   45 (99)
T 1ob1_C           10 KQCPQNSGCFRHLDEREECKCLLNYKQEGD-KCVENP   45 (99)
T ss_dssp             CCCCTTEEEECCTTSCCEEEECTTEEEETT-EEEECS
T ss_pred             CCCCCCCCeEEcCCCCEEEEecCCeecCCC-eEeeCC
Confidence            46889999988 578999999999999998 798874

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A

Probab=97.06  E-value=0.00026  Score=44.69  Aligned_cols=20  Identities=30%  Similarity=0.845  Sum_probs=11.1

Q ss_pred             eeEec-CCccEEeCCCCCeeC
Q psy5614          64 QCKVI-NHTPICTCPEGYIGD   83 (98)
Q Consensus        64 ~C~~~-~g~~~C~C~~Gy~G~   83 (98)
                      +|+++ .++|+|+|++||+|+
T Consensus        15 ~C~~~~~g~y~C~C~~Gy~g~   35 (118)
T 1dx5_I           15 QCQPLDQTSYLCVCAEGFAPI   35 (118)
T ss_dssp             EEEECSSSCEEEECCTTEEEE
T ss_pred             CCCCCCCCCEEeECCCCcccc
Confidence            55555 555555555555554

>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}

Probab=97.05  E-value=0.00041  Score=38.81  Aligned_cols=27  Identities=22%  Similarity=0.502  Sum_probs=22.4

Q ss_pred             ccCCcEE-----e-cCCCCeEEcCCCcEeCCCCCc
Q psy5614           3 WLMWIQC-----S-MQSNPSCSCLPNYIGAPPNCR   31 (98)
Q Consensus         3 ~~~~a~C-----~-~~g~~~C~C~~Gy~Gdg~~C~   31 (98)
                      |+.+++|     + ..++|+|.|++||+|  ..|+
T Consensus        16 C~NgGtC~~~~~~d~~~~y~C~C~~g~~G--~~CE   48 (55)
T 3u7u_G           16 CVNGGECFMVKDLSNPSRYLCKCPNEFTG--DRCQ   48 (55)
T ss_dssp             SCTTCEEEEECCC--CCCEEEEECTTEES--TTSC
T ss_pred             CCCCCCcCCCCccCCCCCEeEeCCCCCcC--CCcC
Confidence            7889999     4 567999999999999  6765

>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4

Probab=97.02  E-value=0.00039  Score=43.82  Aligned_cols=35  Identities=23%  Similarity=0.324  Sum_probs=31.0

Q ss_pred             CCCCCCeeEe-cCCccEEeCCCCCeeCCCCCCccCCC
Q psy5614          58 SCGYNAQCKV-INHTPICTCPEGYIGDPFSSCFPKPP   93 (98)
Q Consensus        58 ~C~~~a~C~~-~~g~~~C~C~~Gy~G~g~~~C~~~~~   93 (98)
                      .|..||.|+. .+|...|.|..||.|||. .|+++.|
T Consensus        17 ~Cp~NA~C~r~~~G~e~CrCl~gY~~dg~-~Cv~~Np   52 (105)
T 1n1i_A           17 NVPENAACYRYLDGTEEWRCLLGFKEVGG-KCVPASI   52 (105)
T ss_dssp             CCCTTEEEEECTTSCEEEEECTTEEECSS-SEEECCC
T ss_pred             CCCCCCCeEECCCCCEeEEEECCeeccCC-EEEECCc
Confidence            5889999998 678999999999999998 7998844

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}

Probab=96.91  E-value=0.0003  Score=50.55  Aligned_cols=31  Identities=35%  Similarity=0.752  Sum_probs=27.6

Q ss_pred             CCCC-CCCCCCCeeEecCCccEEeCCCCCeeC
Q psy5614          53 DPCP-GSCGYNAQCKVINHTPICTCPEGYIGD   83 (98)
Q Consensus        53 d~C~-~~C~~~a~C~~~~g~~~C~C~~Gy~G~   83 (98)
                      |+|. .+|.+++.|++..++|+|.|++||+|+
T Consensus         6 ~~C~~~pC~~~g~C~~~~~~~~C~C~~g~~g~   37 (317)
T 3h5c_B            6 SPCISQPCLHNGSCQDSIWGYTCTCSPGYEGS   37 (317)
T ss_dssp             CCTTSCCCTTTCCCCCCSSSCCCCCSSSCCSS
T ss_pred             CcCCCCCCCCCCEeECCCCCeEEECCCCCcCC
Confidence            5664 789999999999999999999999985

>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*

Probab=96.91  E-value=0.00052  Score=37.83  Aligned_cols=33  Identities=33%  Similarity=0.714  Sum_probs=25.9

Q ss_pred             CCCCCCeeEecCC-ccEEeCCCCCe--eCCCCCCccCCC
Q psy5614          58 SCGYNAQCKVINH-TPICTCPEGYI--GDPFSSCFPKPP   93 (98)
Q Consensus        58 ~C~~~a~C~~~~g-~~~C~C~~Gy~--G~g~~~C~~~~~   93 (98)
                      .|.  ..|+++.+ +|+|.|++||+  .|+. .|++++.
T Consensus         8 gC~--~~C~n~~ggs~~C~C~~Gy~L~~Dg~-tC~d~de   43 (53)
T 2bz6_L            8 GCE--QYCSDHTGTKRSCRCHEGYSLLADGV-SCTPTVE   43 (53)
T ss_dssp             GCS--SEEEEETTTEEEEECCTTEEECTTSS-CEEECSS
T ss_pred             CcC--CEeEcCCCCCEEeeCCCCCEECCCCC-cccCCcc
Confidence            453  37999998 89999999998  5676 7887643

>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1

Probab=96.90  E-value=0.00071  Score=35.82  Aligned_cols=28  Identities=21%  Similarity=0.392  Sum_probs=22.9

Q ss_pred             CccCCcEEe---cCCCCeEEcCCCcEeCCCCCc
Q psy5614           2 SWLMWIQCS---MQSNPSCSCLPNYIGAPPNCR   31 (98)
Q Consensus         2 ~~~~~a~C~---~~g~~~C~C~~Gy~Gdg~~C~   31 (98)
                      .|..+++|+   ..++|+|.|++||+|  ..|+
T Consensus        10 pC~ngg~C~~~~~~~~~~C~C~~G~~G--~~Ce   40 (45)
T 1a3p_A           10 YCLNGGVXMHIESLDSYTCNCVIGYSG--DRCQ   40 (45)
T ss_dssp             CCSSSCEEEECTTTSSEEEECCTTEET--TTTC
T ss_pred             CCCCCCEEEeecCCCCEEEEcCCCCcC--CcCC
Confidence            377889996   557899999999998  5664

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=96.88  E-value=0.00065  Score=50.42  Aligned_cols=39  Identities=21%  Similarity=0.461  Sum_probs=28.9

Q ss_pred             CCCC-CCCCCCCeeEecCCccEEeCCCCCeeC-CCCCCccCC
Q psy5614          53 DPCP-GSCGYNAQCKVINHTPICTCPEGYIGD-PFSSCFPKP   92 (98)
Q Consensus        53 d~C~-~~C~~~a~C~~~~g~~~C~C~~Gy~G~-g~~~C~~~~   92 (98)
                      |||. .++...+.|+++.++|+|.|++||++. +. .|..++
T Consensus         1 ~eC~~~~~~c~~~C~~~~~~y~C~C~~G~~~~~~~-~C~did   41 (400)
T 3p5b_L            1 NECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQR-RCEDID   41 (400)
T ss_dssp             CCTTTTGGGCSSEEEECSSSEEEECCTTEEECSSS-CEEECC
T ss_pred             CcccCCCCCCCCEeECCCCCeEEECCCCCCcCCCC-cccCch
Confidence            4563 455556799999999999999999963 43 576543

>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*

Probab=96.88  E-value=0.00073  Score=39.28  Aligned_cols=34  Identities=35%  Similarity=0.758  Sum_probs=26.6

Q ss_pred             CCCCCCCeeEecCC-ccEEeCCCCCe--eCCCCCCccCCC
Q psy5614          57 GSCGYNAQCKVINH-TPICTCPEGYI--GDPFSSCFPKPP   93 (98)
Q Consensus        57 ~~C~~~a~C~~~~g-~~~C~C~~Gy~--G~g~~~C~~~~~   93 (98)
                      +.|.  ..|+++.+ +|+|.|++||.  .|+. .|.+++.
T Consensus        13 ggC~--h~C~n~~g~s~~C~C~~Gy~L~~D~~-tC~d~de   49 (69)
T 1kli_L           13 GGCE--QYCSDHTGTKRSCRCHEGYSLLADGV-SCTPTVE   49 (69)
T ss_dssp             GGCS--SEEEEETTTEEEEECCTTEEECTTSS-CEEECSS
T ss_pred             CCcC--CEeEcCCCCCEEEeCCCCCeECCCCC-cccCccc
Confidence            4564  47999998 89999999997  5666 7887653

>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*

Probab=96.80  E-value=0.0011  Score=37.31  Aligned_cols=33  Identities=36%  Similarity=0.824  Sum_probs=25.8

Q ss_pred             CCCCCCeeEecC-CccEEeCCCCCe--eCCCCCCccCCC
Q psy5614          58 SCGYNAQCKVIN-HTPICTCPEGYI--GDPFSSCFPKPP   93 (98)
Q Consensus        58 ~C~~~a~C~~~~-g~~~C~C~~Gy~--G~g~~~C~~~~~   93 (98)
                      .|.  ..|+++. |+|+|.|++||.  .|+. .|.++++
T Consensus         8 gC~--~~C~n~~~gs~~C~C~~Gy~L~~D~~-tC~d~~~   43 (59)
T 2wph_E            8 RCE--QFCKNSADNKVVCSCTEGYRLAENQK-SCEPAVP   43 (59)
T ss_dssp             GCS--SEEEECSTTCEEEECCTTEEECTTSS-CEEESSS
T ss_pred             CcC--CEeEeCCCCCEEeeCCCCcEECCCCC-cccCCCC
Confidence            453  3799998 699999999997  5666 7987643

>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A

Probab=96.79  E-value=0.00067  Score=38.68  Aligned_cols=27  Identities=19%  Similarity=0.203  Sum_probs=22.7

Q ss_pred             ccCC--cEEe-cCCCCeEEcCCCcE-eCCCCCc
Q psy5614           3 WLMW--IQCS-MQSNPSCSCLPNYI-GAPPNCR   31 (98)
Q Consensus         3 ~~~~--a~C~-~~g~~~C~C~~Gy~-Gdg~~C~   31 (98)
                      |..+  ++|+ ..++|+|.|++||+ |  ..|+
T Consensus        19 C~nga~gtC~~~~g~y~C~C~~Gy~~G--~~C~   49 (61)
T 2k2s_B           19 CGPEAAGTCKETNSGYICRCNQGYRIS--LDGT   49 (61)
T ss_dssp             SCSSSCCEEEECSSEEEEECCTTEEEE--ECSS
T ss_pred             CcCCCccccccCCCceEeECCCCCccC--CCCC
Confidence            5666  7999 88999999999999 8  5554

>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}

Probab=96.69  E-value=0.00083  Score=52.82  Aligned_cols=32  Identities=25%  Similarity=0.674  Sum_probs=28.4

Q ss_pred             CCCCCCCeeEec-CCccEEeCCCCCeeCCCCCCc
Q psy5614          57 GSCGYNAQCKVI-NHTPICTCPEGYIGDPFSSCF   89 (98)
Q Consensus        57 ~~C~~~a~C~~~-~g~~~C~C~~Gy~G~g~~~C~   89 (98)
                      ++|+.+|.|++. .++|.|+|+.||+|+|. .|-
T Consensus        27 ~~c~~~a~C~~~~~~~~~c~C~~G~ag~G~-~c~   59 (551)
T 3fby_A           27 SECHEHADCVLERDGSRSCVCAVGWAGNGI-LCG   59 (551)
T ss_dssp             CCCCTTEEEEECTTSCEEEEECTTEESSSS-SCE
T ss_pred             CCCCCCCeeEeCCCCCEecCCCCCCCCCCc-ccC
Confidence            699999999995 56889999999999998 675

>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}

Probab=96.68  E-value=0.00092  Score=37.57  Aligned_cols=32  Identities=28%  Similarity=0.638  Sum_probs=24.9

Q ss_pred             CCCCCCeeEec----CCccEEeCCCCCeeCCCCCCccCC
Q psy5614          58 SCGYNAQCKVI----NHTPICTCPEGYIGDPFSSCFPKP   92 (98)
Q Consensus        58 ~C~~~a~C~~~----~g~~~C~C~~Gy~G~g~~~C~~~~   92 (98)
                      +|.++++|+..    ..+|.|.|++||+|.   .|...+
T Consensus        15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~---~Ce~~~   50 (58)
T 3ltf_D           15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQ---RCEYKE   50 (58)
T ss_dssp             TSCSSCEEEEEEETTEEEEEEEECTTEESS---SSCEEC
T ss_pred             cCCCCCEEeCCccCCCCCEEeECCCCCccC---CCcccC
Confidence            89999999843    347899999999984   565433

>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A

Probab=96.56  E-value=0.0015  Score=35.77  Aligned_cols=28  Identities=25%  Similarity=0.530  Sum_probs=23.1

Q ss_pred             CccCCcEEe---cCCCCeEEcCCCcEeCCCCCc
Q psy5614           2 SWLMWIQCS---MQSNPSCSCLPNYIGAPPNCR   31 (98)
Q Consensus         2 ~~~~~a~C~---~~g~~~C~C~~Gy~Gdg~~C~   31 (98)
                      .|..+++|+   ..++|+|.|++||+|  ..|+
T Consensus        13 pC~ngg~C~~~~~~~~~~C~C~~G~~G--~~Ce   43 (53)
T 1egf_A           13 YCLNGGVCMHIESLDSYTCNCVIGYSG--DRCQ   43 (53)
T ss_dssp             SSCSSCEEEEESSSSCEEEECCTTCCS--SSSC
T ss_pred             cCCCCcEEEeeCCCCCEEEECCCCCcC--CcCC
Confidence            377889997   557999999999998  5664

>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}

Probab=96.55  E-value=0.0016  Score=37.91  Aligned_cols=24  Identities=13%  Similarity=0.051  Sum_probs=18.8

Q ss_pred             ccCCcEEe-cCCCCeEE-cCCCcEeC
Q psy5614           3 WLMWIQCS-MQSNPSCS-CLPNYIGA   26 (98)
Q Consensus         3 ~~~~a~C~-~~g~~~C~-C~~Gy~Gd   26 (98)
                      |..+++|+ +.|+|+|. +..||+++
T Consensus        13 C~~~~~C~Nt~Gsy~C~~~~~g~~~~   38 (71)
T 2kl7_A           13 CKGEMKCINHYGGYLCLPRSAAVIND   38 (71)
T ss_dssp             CTTEEEEEETTCCEEEEETTSCCCSC
T ss_pred             CCCCCEeECCCCCeEecccCCccccc
Confidence            66788999 99999997 34577654

>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A

Probab=96.48  E-value=0.0017  Score=42.23  Aligned_cols=28  Identities=36%  Similarity=0.789  Sum_probs=24.4

Q ss_pred             CccCCcEEe-cCCCCeEEcCCCcEeCCCCCc
Q psy5614           2 SWLMWIQCS-MQSNPSCSCLPNYIGAPPNCR   31 (98)
Q Consensus         2 ~~~~~a~C~-~~g~~~C~C~~Gy~Gdg~~C~   31 (98)
                      .|..+++|+ ..++|+|.|++||+|  ..|+
T Consensus       126 ~C~~~g~C~~~~~~~~c~C~~g~~G--~~Ce  154 (162)
T 1g1s_A          126 SCSKQGECLETIGNYTCSCYPGFYG--PECE  154 (162)
T ss_dssp             GGGGSEEEEECSSSEEEEECTTEES--TTSC
T ss_pred             CCCCCCEEecCCCCceEeCCCCCcC--cccc
Confidence            467789999 889999999999999  5676

>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*

Probab=96.42  E-value=0.0017  Score=35.79  Aligned_cols=27  Identities=30%  Similarity=0.656  Sum_probs=22.1

Q ss_pred             ccCCcEEe---cCCCCeEEcCCCcEeCCCCCc
Q psy5614           3 WLMWIQCS---MQSNPSCSCLPNYIGAPPNCR   31 (98)
Q Consensus         3 ~~~~a~C~---~~g~~~C~C~~Gy~Gdg~~C~   31 (98)
                      |+.+++|+   ..++|+|.|++||+|  ..|+
T Consensus        14 C~nGG~C~~~~~~~~~~C~C~~GytG--~~Ce   43 (53)
T 1nql_B           14 CLHDGVCMYIEALDKYACNCVVGYIG--ERCQ   43 (53)
T ss_dssp             ECTTCEEEEETTTTEEEEEECTTEES--TTSC
T ss_pred             CCCCeEEeeecCCCCEEEecCCCCcC--CCCC
Confidence            66788997   456899999999999  6664

>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1

Probab=96.41  E-value=0.0015  Score=35.25  Aligned_cols=25  Identities=28%  Similarity=0.588  Sum_probs=20.3

Q ss_pred             cEEe-cCCCCeEEcCCCcEeC--CCCCc
Q psy5614           7 IQCS-MQSNPSCSCLPNYIGA--PPNCR   31 (98)
Q Consensus         7 a~C~-~~g~~~C~C~~Gy~Gd--g~~C~   31 (98)
                      ..|+ +.|+|+|.|++||+++  +..|.
T Consensus        24 ~~C~n~~Gsy~C~C~~Gy~~~~d~~~C~   51 (53)
T 1apq_A           24 HLCHNYVGGYFCSCRPGYELQEDRHSCQ   51 (53)
T ss_dssp             SEEEEETTEEEEECSTTCEECTTSSCEE
T ss_pred             CEeECCCCCeEEECCCCCeECCCCCccC
Confidence            4899 9999999999999974  44553

>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=96.37  E-value=0.0026  Score=42.01  Aligned_cols=30  Identities=23%  Similarity=0.645  Sum_probs=25.0

Q ss_pred             CCCCCeeEecCCccEEeCCCCCe--eCCCCCCccC
Q psy5614          59 CGYNAQCKVINHTPICTCPEGYI--GDPFSSCFPK   91 (98)
Q Consensus        59 C~~~a~C~~~~g~~~C~C~~Gy~--G~g~~~C~~~   91 (98)
                      |..  .|+++.++|+|.|++||+  +|+. .|+++
T Consensus       137 C~~--~C~n~~g~~~C~C~~Gy~l~~d~~-~C~~~  168 (170)
T 1szb_A          137 CDH--HCHNHLGGFYCSCRAGYVLHRNKR-TCSEQ  168 (170)
T ss_dssp             SSS--EEEEETTEEEEECCTTEEECTTSS-CEEEC
T ss_pred             cCC--ccccCCCCEEEeCCCCcEECCCCC-ccccc
Confidence            764  799999999999999998  5666 68764

>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A

Probab=96.36  E-value=0.0015  Score=34.98  Aligned_cols=26  Identities=35%  Similarity=0.690  Sum_probs=20.5

Q ss_pred             ccCCcEEe-cC--CCCeEEcCCCcEeCCCCCc
Q psy5614           3 WLMWIQCS-MQ--SNPSCSCLPNYIGAPPNCR   31 (98)
Q Consensus         3 ~~~~a~C~-~~--g~~~C~C~~Gy~Gdg~~C~   31 (98)
                      |.. ++|+ ..  ++|+|.|++||+|  ..|+
T Consensus        14 C~n-G~C~~~~~~~~~~C~C~~GytG--~~Ce   42 (46)
T 1k36_A           14 CLH-GQCIYLVDMSQNYCRCEVGYTG--VRCE   42 (46)
T ss_dssp             CSS-EEEEEETTTTEEEEEECTTCSS--TTSC
T ss_pred             CCC-CEeeccCCCCCEEEECCCCCcc--CCCC
Confidence            555 8998 44  6899999999999  5553

>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}

Probab=96.35  E-value=0.0024  Score=48.90  Aligned_cols=76  Identities=28%  Similarity=0.590  Sum_probs=24.1

Q ss_pred             ccCC-cEEe-cCCCCeEEcCCCcEeCCCCCcccCcCC---CCCCCC----------ceeeCCeec---CCC---CCCCCC
Q psy5614           3 WLMW-IQCS-MQSNPSCSCLPNYIGAPPNCRPECVMN---SECASN----------LACINEKCR---DPC---PGSCGY   61 (98)
Q Consensus         3 ~~~~-a~C~-~~g~~~C~C~~Gy~Gdg~~C~~eC~~~---~~C~~~----------~~C~~~~C~---d~C---~~~C~~   61 (98)
                      |..| +.|. ..+.+.|.|+.+++|  ..|+ .|...   .++...          ..|.-=.|-   +.|   .++|.+
T Consensus       299 CnGHas~C~~~~g~~~C~C~~~ttG--~~CE-~C~pgy~~~P~~~gt~~p~~~g~~~~C~pC~Cn~~g~~CD~~t~~C~n  375 (426)
T 3zyj_B          299 CNLHATVCVYDNSKLTCECEHNTTG--PDCG-KCKKNYQGRPWSPGSYLPIPKGAANACIPSISSIGTNVCDNELLHCQN  375 (426)
T ss_dssp             CSSSCSCEEEETTEEEECCCTTEES--SSSC-EECTTCCSSCCCCCBCCSSSSCBCCCCCCCCC----------------
T ss_pred             CCCchhhcCCCCCCceeeCCCCCcC--CCcc-ccccccccCcccCCcccccCCCCCCcccCCCCCCCcCccccCcccCCC
Confidence            4444 4788 777799999999999  6775 23221   112211          112110111   234   268888


Q ss_pred             CCeeEecCCccEEeCCCCCeeCC
Q psy5614          62 NAQCKVINHTPICTCPEGYIGDP   84 (98)
Q Consensus        62 ~a~C~~~~g~~~C~C~~Gy~G~g   84 (98)
                      +++|++..   +|.|++||+|..
T Consensus       376 gg~C~~~~---~C~C~~G~~G~~  395 (426)
T 3zyj_B          376 GGTCHNNV---RCLCPAAYTGIL  395 (426)
T ss_dssp             -----------------------
T ss_pred             CCCcCCCC---CCcCCCCCcCCC
Confidence            99998765   899999999964

>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A

Probab=96.24  E-value=0.0035  Score=35.30  Aligned_cols=28  Identities=25%  Similarity=0.583  Sum_probs=22.9

Q ss_pred             CccCCcEEe-c-----CCCCeEEcCCCcEeCCCCCc
Q psy5614           2 SWLMWIQCS-M-----QSNPSCSCLPNYIGAPPNCR   31 (98)
Q Consensus         2 ~~~~~a~C~-~-----~g~~~C~C~~Gy~Gdg~~C~   31 (98)
                      .|..+++|+ .     .++|+|.|++||+|  ..|+
T Consensus        13 pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G--~~Ce   46 (63)
T 1hae_A           13 FCVNGGECFMVKDLSNPSRYLCKCQPGFTG--ARCT   46 (63)
T ss_dssp             TSCTTCEEEEEESSSSSCCEEEECCTTEES--TTSC
T ss_pred             cCCCCcEEecCCccCCCCCEEEECCCCCcC--CccC
Confidence            377889998 3     47899999999998  6775

>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A

Probab=96.22  E-value=0.0016  Score=42.00  Aligned_cols=36  Identities=25%  Similarity=0.629  Sum_probs=30.8

Q ss_pred             Ceec-CCCC-CCCCCCCeeEecCCccEEeCCCCCeeCC
Q psy5614          49 EKCR-DPCP-GSCGYNAQCKVINHTPICTCPEGYIGDP   84 (98)
Q Consensus        49 ~~C~-d~C~-~~C~~~a~C~~~~g~~~C~C~~Gy~G~g   84 (98)
                      .+|+ ++|. .+|.+++.|.+..++|.|.|.+||+|+.
T Consensus       115 fICe~~~~~~~pc~~~g~C~~~~~~~~c~C~~g~~g~~  152 (157)
T 1g1t_A          115 ALCYTAACTNTSCSGHGECVETINNYTCKCDPGFSGLK  152 (157)
T ss_dssp             EEEEECCCCTTGGGGSEEEEEETTEEEEEECTTEESTT
T ss_pred             eEeCcCCCCCCCCCCCCEeecCCCCeeEECCCCccCcc
Confidence            4666 6774 7899899999999999999999999973

>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}

Probab=96.21  E-value=0.0032  Score=40.96  Aligned_cols=36  Identities=31%  Similarity=0.703  Sum_probs=30.4

Q ss_pred             Ceec-CCCC-CCCCCCCeeEecCCccEEeCCCCCeeCC
Q psy5614          49 EKCR-DPCP-GSCGYNAQCKVINHTPICTCPEGYIGDP   84 (98)
Q Consensus        49 ~~C~-d~C~-~~C~~~a~C~~~~g~~~C~C~~Gy~G~g   84 (98)
                      .+|+ ..|. .+|..++.|++..++|.|.|.+||.|+.
T Consensus       115 fICe~~~~~~~~C~~~g~C~~~~~~~~c~C~~g~~g~~  152 (164)
T 3cfw_A          115 ALCYTASCQPWSCSGHGECVEIINNYTCNCDVGYYGPQ  152 (164)
T ss_dssp             EEEEECCCCTTSSCSSEEEEEETTEEEEEECTTCBSSS
T ss_pred             eEEccCCCCCCcCCCCCeecccCCCceeeeCCCccccc
Confidence            4566 5563 7899999999999999999999999963

>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...

Probab=96.20  E-value=0.0022  Score=35.33  Aligned_cols=26  Identities=31%  Similarity=0.657  Sum_probs=21.6

Q ss_pred             cEEe-cCCCCeEEcCCCcE--eCCCCCcc
Q psy5614           7 IQCS-MQSNPSCSCLPNYI--GAPPNCRP   32 (98)
Q Consensus         7 a~C~-~~g~~~C~C~~Gy~--Gdg~~C~~   32 (98)
                      ..|+ +.|+|+|.|++||+  .|+..|.+
T Consensus        13 ~~C~nt~Gsy~C~C~~Gy~L~~d~~~C~d   41 (55)
T 2jkh_L           13 QFCHEEQNSVVCSCARGYTLADNGKACIP   41 (55)
T ss_dssp             SEEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred             cEeEcCCCCeEEeCCCCCEECCCCCeecc
Confidence            3789 99999999999997  56677763

>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A

Probab=96.16  E-value=0.0031  Score=38.05  Aligned_cols=27  Identities=22%  Similarity=0.534  Sum_probs=22.7

Q ss_pred             ccCCcEEe-cC--CCCeEEcCCCcEeCCCCCc
Q psy5614           3 WLMWIQCS-MQ--SNPSCSCLPNYIGAPPNCR   31 (98)
Q Consensus         3 ~~~~a~C~-~~--g~~~C~C~~Gy~Gdg~~C~   31 (98)
                      |..+++|+ ..  ++|+|.|++||+|  ..|+
T Consensus        56 C~ngg~C~~~~~~~~~~C~C~~G~~G--~~Ce   85 (91)
T 1tpg_A           56 CFNGGTCQQALYFSDFVCQCPEGFAG--KSCE   85 (91)
T ss_dssp             SCTTCEEEEESSSSCEEEECCTTCBS--SSCC
T ss_pred             CCCCCEeecCCCCCCeEeECCCCCcC--CcCC
Confidence            67789999 66  8999999999998  5664

>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...

Probab=96.14  E-value=0.0025  Score=50.07  Aligned_cols=32  Identities=28%  Similarity=0.608  Sum_probs=27.7

Q ss_pred             CCCC-CCCCCCCeeEe-cCCccEEeCC-CCCeeCC
Q psy5614          53 DPCP-GSCGYNAQCKV-INHTPICTCP-EGYIGDP   84 (98)
Q Consensus        53 d~C~-~~C~~~a~C~~-~~g~~~C~C~-~Gy~G~g   84 (98)
                      |+|. ++|.++++|++ ..++|+|.|+ +||+|..
T Consensus         3 d~C~~~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~   37 (553)
T 1q4g_A            3 NPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPN   37 (553)
T ss_dssp             CGGGGCCCCTTCEEEEETTTEEEEECTTSSEETTT
T ss_pred             CcCCCCCCCCCCCcCCCCCCceEeeCCCCCcCCCC
Confidence            4563 79999999999 7889999999 9999953

>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D

Probab=96.04  E-value=0.0023  Score=34.86  Aligned_cols=27  Identities=26%  Similarity=0.593  Sum_probs=21.9

Q ss_pred             ccCCcEEe-c----CCCCeEEcCCCcEeCCCCCc
Q psy5614           3 WLMWIQCS-M----QSNPSCSCLPNYIGAPPNCR   31 (98)
Q Consensus         3 ~~~~a~C~-~----~g~~~C~C~~Gy~Gdg~~C~   31 (98)
                      |..+++|+ .    .++|+|.|++||+|  ..|+
T Consensus        16 C~NGGtC~~~~~~~~~~y~C~C~~Gf~G--~~Ce   47 (52)
T 3ca7_A           16 CLNDAHCFAVKIADLPVYSCECAIGFMG--QRCE   47 (52)
T ss_dssp             SCTTCEEEEEEETTEEEEEEECCTTEES--TTSC
T ss_pred             CCCCCEEecCccCCCCCEEEECCCCCcC--CCCc
Confidence            77889998 4    35799999999999  5664

>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...

Probab=95.97  E-value=0.0039  Score=49.38  Aligned_cols=32  Identities=25%  Similarity=0.726  Sum_probs=27.0

Q ss_pred             CCCC-CCCCCCCeeEe-cCCccEEeCC-CCCeeCC
Q psy5614          53 DPCP-GSCGYNAQCKV-INHTPICTCP-EGYIGDP   84 (98)
Q Consensus        53 d~C~-~~C~~~a~C~~-~~g~~~C~C~-~Gy~G~g   84 (98)
                      |+|. ++|.++++|++ ..++|+|.|+ +||+|..
T Consensus         2 d~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~   36 (587)
T 3nt1_A            2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGEN   36 (587)
T ss_dssp             CTTTTCCCCTTCEEEEEETTEEEEECTTSSEETTT
T ss_pred             CCCCCCCCCCCCEeeCCCCCCeEEecCCCCccCCC
Confidence            5674 89999999996 4589999999 9999853

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=95.89  E-value=0.012  Score=47.86  Aligned_cols=28  Identities=21%  Similarity=0.476  Sum_probs=22.8

Q ss_pred             CeeEecCCccEEeCCCCCee-CCCCCCccC
Q psy5614          63 AQCKVINHTPICTCPEGYIG-DPFSSCFPK   91 (98)
Q Consensus        63 a~C~~~~g~~~C~C~~Gy~G-~g~~~C~~~   91 (98)
                      +.|+++.++|+|.|++||.+ ++. .|..+
T Consensus       324 ~~C~~~~~~y~C~C~~Gy~l~~g~-~C~di  352 (791)
T 3m0c_C          324 HVCNDLKIGYECLCPDGFQLVAQR-RCEDI  352 (791)
T ss_dssp             SEEEECSBSEEEECCTTCEEETTT-EEECC
T ss_pred             ccccCCCCCcccCCCCCCccCCCC-ccccC
Confidence            48999999999999999986 454 56654

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=95.83  E-value=0.0061  Score=48.49  Aligned_cols=36  Identities=25%  Similarity=0.646  Sum_probs=26.8

Q ss_pred             CCCC---CCCCCCCeeEecCCccEEeCCCCCee-CCCCCCccC
Q psy5614          53 DPCP---GSCGYNAQCKVINHTPICTCPEGYIG-DPFSSCFPK   91 (98)
Q Consensus        53 d~C~---~~C~~~a~C~~~~g~~~C~C~~Gy~G-~g~~~C~~~   91 (98)
                      +||.   +.|.  +.|+++.++|+|.|++||++ ++. .|..+
T Consensus       295 ~eC~~~~~~C~--~~C~~~~~~~~C~C~~G~~~~~~~-~C~di  334 (699)
T 1n7d_A          295 NECLDNNGGCS--HVCNDLKIGYECLCPDGFQLVAQR-RCEDI  334 (699)
T ss_dssp             CCTTSSTTTSC--TTCCCCTTCCCCCCCSSSCCCSSS-CCCCC
T ss_pred             ccccccccCcC--CCcccCCCCcEEeCCCCeEcCCCC-cccCc
Confidence            6663   3453  58999999999999999996 343 57654

>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}

Probab=95.43  E-value=0.0041  Score=47.97  Aligned_cols=61  Identities=20%  Similarity=0.430  Sum_probs=13.5

Q ss_pred             CCCeEEcCCCcEeCCCCCcccCcCCCCCCCCceeeCCeecCCCC-CCCCCCCeeEec--CCccEEeCCCCCeeC
Q psy5614          13 SNPSCSCLPNYIGAPPNCRPECVMNSECASNLACINEKCRDPCP-GSCGYNAQCKVI--NHTPICTCPEGYIGD   83 (98)
Q Consensus        13 g~~~C~C~~Gy~Gdg~~C~~eC~~~~~C~~~~~C~~~~C~d~C~-~~C~~~a~C~~~--~g~~~C~C~~Gy~G~   83 (98)
                      ..++|.|++||+|  ..|+ +|.....    ....+   .+.|. -+|.+++.+...  ...++|+|++||+|+
T Consensus       458 ~tg~C~C~~g~~G--~~Ce-~C~~G~~----g~~~~---~~~C~~C~C~~~gs~~~~C~~~tG~C~C~~G~~G~  521 (525)
T 4aqs_A          458 ETGYCYCKRLVTG--QRCD-QCLPQHW----GLSND---LDGCRPCDCDLGGALNNSCSEDSGQCSCLPHMIGR  521 (525)
T ss_dssp             TTCCBCBCTTCCS--TTTC-C-----------------------------------------------------
T ss_pred             CCCEEECCCCCcC--CCcc-cCCCCcc----CCCCC---CCCCcCCCCCCCCccCCccCCCCCeeECCCCCcCC
Confidence            3567999999998  6674 2332110    00000   02232 345555555442  234579999999985

>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A

Probab=95.40  E-value=0.016  Score=31.64  Aligned_cols=26  Identities=31%  Similarity=0.881  Sum_probs=21.2

Q ss_pred             CCCCCCCeeEecC--CccEEeCCCCCeeC
Q psy5614          57 GSCGYNAQCKVIN--HTPICTCPEGYIGD   83 (98)
Q Consensus        57 ~~C~~~a~C~~~~--g~~~C~C~~Gy~G~   83 (98)
                      +.|.++ +|....  ..+.|.|++||+|+
T Consensus        14 ~yC~nG-~C~~~~~~~~~~C~C~~gy~G~   41 (50)
T 3e50_C           14 QFCFHG-TCRFLVQEDKPACVCHSGYVGA   41 (50)
T ss_pred             CcccCC-EEeeccCCCCeEEECCCCCccc
Confidence            578765 998743  58999999999995

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=95.27  E-value=0.0031  Score=46.41  Aligned_cols=39  Identities=28%  Similarity=0.647  Sum_probs=0.0

Q ss_pred             CCCC-CCCCCCCeeEecCCccEEeCCCCCe--eCCCCCCccCC
Q psy5614          53 DPCP-GSCGYNAQCKVINHTPICTCPEGYI--GDPFSSCFPKP   92 (98)
Q Consensus        53 d~C~-~~C~~~a~C~~~~g~~~C~C~~Gy~--G~g~~~C~~~~   92 (98)
                      |+|. .++.-...|.+..++|+|.|++||+  ++|. .|..++
T Consensus         4 ~~C~~~~~~c~~~C~~~~g~~~C~C~~G~~l~~~~~-~C~d~~   45 (386)
T 3v65_B            4 ENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTEDGR-TCQDVN   45 (386)
T ss_dssp             -------------------------------------------
T ss_pred             CcccCCCCCCCCCCcCCCCCcEeECCCCceECCCCC-ccCccc
Confidence            4553 3333334898889999999999998  4454 676543

>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}

Probab=95.02  E-value=0.012  Score=38.21  Aligned_cols=28  Identities=32%  Similarity=0.711  Sum_probs=24.5

Q ss_pred             CccCCcEEe-cCCCCeEEcCCCcEeCCCCCc
Q psy5614           2 SWLMWIQCS-MQSNPSCSCLPNYIGAPPNCR   31 (98)
Q Consensus         2 ~~~~~a~C~-~~g~~~C~C~~Gy~Gdg~~C~   31 (98)
                      .|..++.|. ..++|+|.|.+||.|  ..|+
T Consensus       126 ~C~~~g~C~~~~~~~~c~C~~g~~g--~~C~  154 (164)
T 3cfw_A          126 SCSGHGECVEIINNYTCNCDVGYYG--PQCQ  154 (164)
T ss_dssp             SSCSSEEEEEETTEEEEEECTTCBS--SSSC
T ss_pred             cCCCCCeecccCCCceeeeCCCccc--cccc
Confidence            477899999 888999999999999  5676

>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}

Probab=95.00  E-value=0.0091  Score=33.38  Aligned_cols=27  Identities=26%  Similarity=0.593  Sum_probs=21.9

Q ss_pred             ccCCcEEe-c----CCCCeEEcCCCcEeCCCCCc
Q psy5614           3 WLMWIQCS-M----QSNPSCSCLPNYIGAPPNCR   31 (98)
Q Consensus         3 ~~~~a~C~-~----~g~~~C~C~~Gy~Gdg~~C~   31 (98)
                      |+.+++|+ .    .+.|.|.|++||+|  ..|+
T Consensus        16 C~NGGtC~~~~~~~~~~~~C~C~~Gf~G--~~Ce   47 (58)
T 3ltf_D           16 CLNDAHCFAVKIADLPVYSCECAIGFMG--QRCE   47 (58)
T ss_dssp             SCSSCEEEEEEETTEEEEEEEECTTEES--SSSC
T ss_pred             CCCCCEEeCCccCCCCCEEeECCCCCcc--CCCc
Confidence            77889998 4    34789999999999  6775

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*

Probab=94.98  E-value=0.023  Score=45.80  Aligned_cols=56  Identities=29%  Similarity=0.771  Sum_probs=36.9

Q ss_pred             CcEEecCCCCeEEcCCCcEeCCCCCc-----ccCcCC--CCCCCCceeeCCeec-------------CCCCCCCCCCCee
Q psy5614           6 WIQCSMQSNPSCSCLPNYIGAPPNCR-----PECVMN--SECASNLACINEKCR-------------DPCPGSCGYNAQC   65 (98)
Q Consensus         6 ~a~C~~~g~~~C~C~~Gy~Gdg~~C~-----~eC~~~--~~C~~~~~C~~~~C~-------------d~C~~~C~~~a~C   65 (98)
                      +++|.   ..+|.|.+||+|  ..|+     ++|...  ..|..+++|....|.             ..|..+|.+++.|
T Consensus       532 ~G~C~---~g~C~C~~G~~G--~~Cec~~~~~~C~~~~g~~Cs~~G~C~~g~C~C~~Gy~G~~Ce~c~~C~~~C~~~g~C  606 (687)
T 3k6s_B          532 RGLCF---CGKCRCHPGFEG--SACQCERTTEGCLNPRRVECSGRGRCRCNVCECHSGYQLPLCQECPGCPSPCGKYISC  606 (687)
T ss_dssp             HEEEE---TTEEEECTTCCS--TTSCSCCSSCTTBCTTCSBTSSSCCBCSSCBCCSTTCCTTTTCCCTTSCCCCTTTHHH
T ss_pred             CCeEE---CCEEEcCCCCcC--CCCccCCCCCCCCCCCCCCCCCCCcCCCCEEECCCCCcCCCCCCCCCCCcccCCCCCC
Confidence            67776   137999999999  5665     356532  357777777655444             2355677777777


Q ss_pred             E
Q psy5614          66 K   66 (98)
Q Consensus        66 ~   66 (98)
                      +
T Consensus       607 v  607 (687)
T 3k6s_B          607 A  607 (687)
T ss_dssp             H
T ss_pred             C
Confidence            6

>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A

Probab=94.92  E-value=0.022  Score=36.17  Aligned_cols=26  Identities=23%  Similarity=0.630  Sum_probs=21.7

Q ss_pred             CCCCCCeeEecC--Ccc-EEeCCCCCeeC
Q psy5614          58 SCGYNAQCKVIN--HTP-ICTCPEGYIGD   83 (98)
Q Consensus        58 ~C~~~a~C~~~~--g~~-~C~C~~Gy~G~   83 (98)
                      +|.++++|++..  ..| +|.|++||+|.
T Consensus         2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G~   30 (122)
T 2fd6_A            2 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQ   30 (122)
T ss_dssp             CCCSSCEEEECTTTTTCEEEECCTTEEST
T ss_pred             CCCCcCCcCCCcccCCCCCccCCCCCCCc
Confidence            688999999874  455 99999999984

>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}

Probab=94.88  E-value=0.015  Score=45.77  Aligned_cols=30  Identities=20%  Similarity=0.437  Sum_probs=27.5

Q ss_pred             CccCCcEEe--cCCCCeEEcCCCcEeCCCCCc
Q psy5614           2 SWLMWIQCS--MQSNPSCSCLPNYIGAPPNCR   31 (98)
Q Consensus         2 ~~~~~a~C~--~~g~~~C~C~~Gy~Gdg~~C~   31 (98)
                      .|+.||.|+  ..+.|.|.|+.||.|+|..|.
T Consensus        28 ~c~~~a~C~~~~~~~~~c~C~~G~ag~G~~c~   59 (551)
T 3fby_A           28 ECHEHADCVLERDGSRSCVCAVGWAGNGILCG   59 (551)
T ss_dssp             CCCTTEEEEECTTSCEEEEECTTEESSSSSCE
T ss_pred             CCCCCCeeEeCCCCCEecCCCCCCCCCCcccC
Confidence            589999999  678889999999999999986

>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*

Probab=94.87  E-value=0.013  Score=31.99  Aligned_cols=25  Identities=32%  Similarity=0.755  Sum_probs=20.2

Q ss_pred             EEe-cCC-CCeEEcCCCcE--eCCCCCcc
Q psy5614           8 QCS-MQS-NPSCSCLPNYI--GAPPNCRP   32 (98)
Q Consensus         8 ~C~-~~g-~~~C~C~~Gy~--Gdg~~C~~   32 (98)
                      .|+ +.+ +|+|.|.+||+  .|+..|.+
T Consensus        12 ~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~d   40 (53)
T 2bz6_L           12 YCSDHTGTKRSCRCHEGYSLLADGVSCTP   40 (53)
T ss_dssp             EEEEETTTEEEEECCTTEEECTTSSCEEE
T ss_pred             EeEcCCCCCEEeeCCCCCEECCCCCcccC
Confidence            688 777 79999999997  56777763

>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=94.86  E-value=0.028  Score=36.25  Aligned_cols=35  Identities=26%  Similarity=0.635  Sum_probs=26.4

Q ss_pred             CCCC----CCCCCCCeeEecCCccEEeCCCCCe--eCCCCCCcc
Q psy5614          53 DPCP----GSCGYNAQCKVINHTPICTCPEGYI--GDPFSSCFP   90 (98)
Q Consensus        53 d~C~----~~C~~~a~C~~~~g~~~C~C~~Gy~--G~g~~~C~~   90 (98)
                      |+|.    ..|.  ..|.+..++|+|.|++||+  +|+. .|..
T Consensus       118 ~eC~~~~~~~C~--~~C~n~~g~~~C~C~~Gy~l~~~~~-~C~~  158 (159)
T 1nzi_A          118 NECTDFVDVPCS--HFCNNFIGGYFCSCPPEYFLHDDMK-NCGV  158 (159)
T ss_dssp             CTTTC-CCCCSS--SEEEEETTEEEEECCTTCEECTTSS-CEEC
T ss_pred             cccCCCCCCCCC--CcccCcCCCEEEecCCCcEECCCCC-cccc
Confidence            5673    3564  4799999999999999998  4555 5653

>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1

Probab=94.64  E-value=0.0052  Score=33.34  Aligned_cols=25  Identities=28%  Similarity=0.719  Sum_probs=21.1

Q ss_pred             EEe-cCCCCeEEcCCCcE--eCCCCCcc
Q psy5614           8 QCS-MQSNPSCSCLPNYI--GAPPNCRP   32 (98)
Q Consensus         8 ~C~-~~g~~~C~C~~Gy~--Gdg~~C~~   32 (98)
                      .|+ +.|+|+|.|++||+  .|+..|.+
T Consensus        11 ~C~n~~gs~~C~C~~Gy~L~~d~~tC~d   38 (51)
T 1kig_L           11 FCREERSEVRCSCAHGYVLGDDSKSCVS   38 (51)
T ss_dssp             CCCEETTEECCCCCTTEEECTTSSCEEE
T ss_pred             EeEcCCCCeEEeCCCCcEECCCCCcccc
Confidence            688 88999999999997  67778764

>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}

Probab=94.60  E-value=0.038  Score=30.08  Aligned_cols=26  Identities=31%  Similarity=0.765  Sum_probs=20.5

Q ss_pred             CCCCCCCeeEec--CCccEEeCCCCCeeC
Q psy5614          57 GSCGYNAQCKVI--NHTPICTCPEGYIGD   83 (98)
Q Consensus        57 ~~C~~~a~C~~~--~g~~~C~C~~Gy~G~   83 (98)
                      +.|.+ ++|...  .+.+.|.|++||+|+
T Consensus        18 ~yC~n-G~C~~i~~~~~~~C~C~~gy~G~   45 (50)
T 2rnl_A           18 NFCIH-GECKYIEHLEAVTCKCQQEYFGE   45 (50)
T ss_dssp             GTCSS-SEEEEETTTTEEEEECCSSCCSS
T ss_pred             CcCCC-CEEEEecCCCCeeEECCCCcccc
Confidence            46775 599864  447899999999995

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=94.58  E-value=0.014  Score=42.32  Aligned_cols=34  Identities=32%  Similarity=0.591  Sum_probs=23.3

Q ss_pred             CCCCCCCeeEecCCccEEeCCCCCe--eCCCCCCccCCC
Q psy5614          57 GSCGYNAQCKVINHTPICTCPEGYI--GDPFSSCFPKPP   93 (98)
Q Consensus        57 ~~C~~~a~C~~~~g~~~C~C~~Gy~--G~g~~~C~~~~~   93 (98)
                      +.|..  .|+++.++|+|.|.+||.  .|+. .|.+..+
T Consensus         8 ~~C~~--~C~n~~g~~~C~C~~g~~l~~d~~-~C~~~~~   43 (349)
T 3v64_C            8 GYCSQ--GCTNSEGAFQCWCEAGYELRPDRR-SCKALGP   43 (349)
T ss_dssp             -CCSS--EECCC---CCEECCTTEEECTTSS-CEEESSS
T ss_pred             CCCcC--eeecCCCCeEEECCCCccCCCCCC-ccccccc
Confidence            45653  899999999999999998  4555 7987644

>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1

Probab=93.79  E-value=0.022  Score=34.02  Aligned_cols=26  Identities=35%  Similarity=0.861  Sum_probs=20.5

Q ss_pred             CCCCCCCeeEec--CCccEEeCCCCCeeC
Q psy5614          57 GSCGYNAQCKVI--NHTPICTCPEGYIGD   83 (98)
Q Consensus        57 ~~C~~~a~C~~~--~g~~~C~C~~Gy~G~   83 (98)
                      +.|.++ +|+..  .+.+.|.|.+||+|+
T Consensus        46 ~yClnG-~C~~i~~~~~~~C~C~~GYtG~   73 (79)
T 1xdt_R           46 DFCIHG-ECKYVKELRAPSCICHPGYHGE   73 (79)
T ss_dssp             TCCSSE-EECCBGGGTBCCEEECTTEEST
T ss_pred             CcCCCC-EeeeecCCCCeEEEcCCCcccc
Confidence            578765 89654  358899999999995

>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A

Probab=93.68  E-value=0.045  Score=29.67  Aligned_cols=30  Identities=40%  Similarity=0.982  Sum_probs=22.5

Q ss_pred             CCCCCCCeeEec--CCccEEeCCCCCeeCCCCCCcc
Q psy5614          57 GSCGYNAQCKVI--NHTPICTCPEGYIGDPFSSCFP   90 (98)
Q Consensus        57 ~~C~~~a~C~~~--~g~~~C~C~~Gy~G~g~~~C~~   90 (98)
                      +.|.+ ++|...  .+.+.|.|++||+|+   +|.-
T Consensus        14 ~yC~n-G~C~~~~~~~~~~C~C~~gy~G~---RCe~   45 (50)
T 1iox_A           14 HYCIK-GRCRFVVAEQTPSCVCDEGYIGA---RCER   45 (50)
T ss_dssp             TSCTT-CCEEEETTTTEEEECCCTTEETT---TTCE
T ss_pred             CcccC-CEEEeEcCCCCeEEECCCCcccC---CCCe
Confidence            56776 789753  457899999999995   4543

>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A

Probab=93.38  E-value=0.04  Score=36.38  Aligned_cols=27  Identities=19%  Similarity=0.449  Sum_probs=22.1

Q ss_pred             ccCCcEEe-cC--CCCeE-EcCCCcEeCCCCCc
Q psy5614           3 WLMWIQCS-MQ--SNPSC-SCLPNYIGAPPNCR   31 (98)
Q Consensus         3 ~~~~a~C~-~~--g~~~C-~C~~Gy~Gdg~~C~   31 (98)
                      |..+++|. ..  +.++| .|++||+|  ..|+
T Consensus         3 C~~~g~C~~~~~~g~~~C~~C~~g~~G--~~Ce   33 (162)
T 1klo_A            3 CPGGSSCAIVPKTKEVVCTHCPTGTAG--KRCE   33 (162)
T ss_dssp             SCTTCCEEECSSSCCEEECSCCTTEES--TTSC
T ss_pred             CcCcCcccccCCCCCEEeCCCCCCCcC--CCCc
Confidence            67889998 44  67899 79999999  6775

>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}

Probab=93.32  E-value=0.072  Score=39.41  Aligned_cols=31  Identities=23%  Similarity=0.549  Sum_probs=27.3

Q ss_pred             CCCC-CCCCCCCeeEecCCccEEeCCC-CCeeC
Q psy5614          53 DPCP-GSCGYNAQCKVINHTPICTCPE-GYIGD   83 (98)
Q Consensus        53 d~C~-~~C~~~a~C~~~~g~~~C~C~~-Gy~G~   83 (98)
                      ++|. .+|.++++|+....+|+|.|+. ||.|.
T Consensus       186 ~~C~~~pC~n~g~C~~~~~~~~C~C~~~~~~G~  218 (410)
T 3asi_A          186 TTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGP  218 (410)
T ss_dssp             SCCCTTSSSTTCEEEECSSSEEEECTTTSEEST
T ss_pred             CCcccccCCCCCEecCCCCCceEeccCCcccCC
Confidence            5674 8999999999998999999996 99875

>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A

Probab=93.31  E-value=0.068  Score=29.08  Aligned_cols=24  Identities=29%  Similarity=0.938  Sum_probs=18.8

Q ss_pred             CcEEe---cCCCCeEEcCCCcEeCCCCCc
Q psy5614           6 WIQCS---MQSNPSCSCLPNYIGAPPNCR   31 (98)
Q Consensus         6 ~a~C~---~~g~~~C~C~~Gy~Gdg~~C~   31 (98)
                      |++|.   ..+.+.|.|.+||+|  ..|+
T Consensus        18 nG~C~~~~~~~~~~C~C~~gy~G--~RCe   44 (50)
T 3e50_C           18 HGTCRFLVQEDKPACVCHSGYVG--ARCE   44 (50)
T ss_pred             CCEEeeccCCCCeEEECCCCCcc--cCCC
Confidence            45898   347899999999999  5553

>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*

Probab=93.19  E-value=0.048  Score=30.37  Aligned_cols=25  Identities=28%  Similarity=0.720  Sum_probs=20.0

Q ss_pred             EEe-cC-CCCeEEcCCCcE--eCCCCCcc
Q psy5614           8 QCS-MQ-SNPSCSCLPNYI--GAPPNCRP   32 (98)
Q Consensus         8 ~C~-~~-g~~~C~C~~Gy~--Gdg~~C~~   32 (98)
                      .|+ .. |+|+|.|.+||.  .|+..|.+
T Consensus        12 ~C~n~~~gs~~C~C~~Gy~L~~D~~tC~d   40 (59)
T 2wph_E           12 FCKNSADNKVVCSCTEGYRLAENQKSCEP   40 (59)
T ss_dssp             EEEECSTTCEEEECCTTEEECTTSSCEEE
T ss_pred             EeEeCCCCCEEeeCCCCcEECCCCCcccC
Confidence            677 66 699999999996  56677764

>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*

Probab=92.81  E-value=0.052  Score=31.22  Aligned_cols=25  Identities=32%  Similarity=0.755  Sum_probs=20.0

Q ss_pred             EEe-cCC-CCeEEcCCCcE--eCCCCCcc
Q psy5614           8 QCS-MQS-NPSCSCLPNYI--GAPPNCRP   32 (98)
Q Consensus         8 ~C~-~~g-~~~C~C~~Gy~--Gdg~~C~~   32 (98)
                      .|+ +.+ +|+|.|.+||.  .|+..|.+
T Consensus        18 ~C~n~~g~s~~C~C~~Gy~L~~D~~tC~d   46 (69)
T 1kli_L           18 YCSDHTGTKRSCRCHEGYSLLADGVSCTP   46 (69)
T ss_dssp             EEEEETTTEEEEECCTTEEECTTSSCEEE
T ss_pred             EeEcCCCCCEEEeCCCCCeECCCCCcccC
Confidence            677 777 89999999996  46677764

>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A

Probab=92.77  E-value=0.044  Score=29.74  Aligned_cols=26  Identities=35%  Similarity=0.884  Sum_probs=19.5

Q ss_pred             ccCCcEEe---cCCCCeEEcCCCcEeCCCCCc
Q psy5614           3 WLMWIQCS---MQSNPSCSCLPNYIGAPPNCR   31 (98)
Q Consensus         3 ~~~~a~C~---~~g~~~C~C~~Gy~Gdg~~C~   31 (98)
                      |+. ++|.   ..+.+.|.|.+||+|  ..|+
T Consensus        16 C~n-G~C~~~~~~~~~~C~C~~gy~G--~RCe   44 (50)
T 1iox_A           16 CIK-GRCRFVVAEQTPSCVCDEGYIG--ARCE   44 (50)
T ss_dssp             CTT-CCEEEETTTTEEEECCCTTEET--TTTC
T ss_pred             ccC-CEEEeEcCCCCeEEECCCCccc--CCCC
Confidence            444 7896   456789999999999  5554

>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}

Probab=92.70  E-value=0.048  Score=41.97  Aligned_cols=18  Identities=28%  Similarity=0.611  Sum_probs=12.1

Q ss_pred             ccEEeCCCCCeeCCCCCC
Q psy5614          71 TPICTCPEGYIGDPFSSC   88 (98)
Q Consensus        71 ~~~C~C~~Gy~G~g~~~C   88 (98)
                      .++|.|++||+|..-..|
T Consensus       459 tg~C~C~~g~~G~~Ce~C  476 (525)
T 4aqs_A          459 TGYCYCKRLVTGQRCDQC  476 (525)
T ss_dssp             TCCBCBCTTCCSTTTCC-
T ss_pred             CCEEECCCCCcCCCcccC
Confidence            456889999888654334

>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*

Probab=92.11  E-value=0.13  Score=35.27  Aligned_cols=31  Identities=39%  Similarity=1.157  Sum_probs=24.1

Q ss_pred             eec-CCCCCCCCCCCeeEecCCccEEeCCCCCeeC
Q psy5614          50 KCR-DPCPGSCGYNAQCKVINHTPICTCPEGYIGD   83 (98)
Q Consensus        50 ~C~-d~C~~~C~~~a~C~~~~g~~~C~C~~Gy~G~   83 (98)
                      .|. -.|...|.+++.|+.   -.+|+|++||+|.
T Consensus       145 ~C~~~~C~~~C~ngG~Cv~---P~~C~C~~Gw~G~  176 (188)
T 2ygo_A          145 TCQQAECPGGCRNGGFCNE---RRICECPDGFHGP  176 (188)
T ss_dssp             EECCCCCTTCCCTTCEECT---TSCEECCTTCBTT
T ss_pred             cccCCccCCCCCCCCEeCC---CCcccCcCCCCCC
Confidence            444 456678999999984   3479999999985

>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}

Probab=91.95  E-value=0.075  Score=28.87  Aligned_cols=23  Identities=26%  Similarity=0.777  Sum_probs=18.2

Q ss_pred             CcEEe---cCCCCeEEcCCCcEeCCCCC
Q psy5614           6 WIQCS---MQSNPSCSCLPNYIGAPPNC   30 (98)
Q Consensus         6 ~a~C~---~~g~~~C~C~~Gy~Gdg~~C   30 (98)
                      |++|.   ..+.+.|.|.+||+|  ..|
T Consensus        22 nG~C~~i~~~~~~~C~C~~gy~G--~RC   47 (50)
T 2rnl_A           22 HGECKYIEHLEAVTCKCQQEYFG--ERC   47 (50)
T ss_dssp             SSEEEEETTTTEEEEECCSSCCS--SSC
T ss_pred             CCEEEEecCCCCeeEECCCCccc--ccc
Confidence            57997   445789999999999  454

>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=91.82  E-value=0.081  Score=34.61  Aligned_cols=25  Identities=24%  Similarity=0.638  Sum_probs=20.2

Q ss_pred             EEe-cCCCCeEEcCCCcE--eCCCCCcc
Q psy5614           8 QCS-MQSNPSCSCLPNYI--GAPPNCRP   32 (98)
Q Consensus         8 ~C~-~~g~~~C~C~~Gy~--Gdg~~C~~   32 (98)
                      .|+ ..++|+|.|++||+  +|+..|.+
T Consensus       140 ~C~n~~g~~~C~C~~Gy~l~~d~~~C~~  167 (170)
T 1szb_A          140 HCHNHLGGFYCSCRAGYVLHRNKRTCSE  167 (170)
T ss_dssp             EEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred             ccccCCCCEEEeCCCCcEECCCCCcccc
Confidence            799 88999999999998  45556643

>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A

Probab=91.41  E-value=0.13  Score=33.86  Aligned_cols=33  Identities=24%  Similarity=0.708  Sum_probs=24.7

Q ss_pred             CCCCCCeeEecC--CccEE-eCCCCCeeCCCCCCcc
Q psy5614          58 SCGYNAQCKVIN--HTPIC-TCPEGYIGDPFSSCFP   90 (98)
Q Consensus        58 ~C~~~a~C~~~~--g~~~C-~C~~Gy~G~g~~~C~~   90 (98)
                      +|.+++.|....  +.++| .|++||+|+.-..|.+
T Consensus         2 ~C~~~g~C~~~~~~g~~~C~~C~~g~~G~~Ce~C~~   37 (162)
T 1klo_A            2 PCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCELCDD   37 (162)
T ss_dssp             CSCTTCCEEECSSSCCEEECSCCTTEESTTSCEECT
T ss_pred             cCcCcCcccccCCCCCEEeCCCCCCCcCCCCcCCCC
Confidence            578889998765  57899 7999999876544443

>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A

Probab=91.20  E-value=0.2  Score=31.62  Aligned_cols=27  Identities=30%  Similarity=0.545  Sum_probs=22.3

Q ss_pred             ccCCcEEe-cC--CCC-eEEcCCCcEeCCCCCc
Q psy5614           3 WLMWIQCS-MQ--SNP-SCSCLPNYIGAPPNCR   31 (98)
Q Consensus         3 ~~~~a~C~-~~--g~~-~C~C~~Gy~Gdg~~C~   31 (98)
                      |..+++|+ ..  .+| +|.|++||+|  ..|+
T Consensus         3 C~nggtC~~~~~~~~~~~C~Cp~g~~G--~~Ce   33 (122)
T 2fd6_A            3 CLNGGTCVSNKYFSNIHWCNCPKKFGG--QHCE   33 (122)
T ss_dssp             CCSSCEEEECTTTTTCEEEECCTTEES--TTSC
T ss_pred             CCCcCCcCCCcccCCCCCccCCCCCCC--cccc
Confidence            77889998 53  566 9999999999  6776

>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*

Probab=90.20  E-value=0.26  Score=32.14  Aligned_cols=27  Identities=22%  Similarity=0.545  Sum_probs=21.7

Q ss_pred             CCCCCCeeEec--CCcc-EEeCCCCCeeCC
Q psy5614          58 SCGYNAQCKVI--NHTP-ICTCPEGYIGDP   84 (98)
Q Consensus        58 ~C~~~a~C~~~--~g~~-~C~C~~Gy~G~g   84 (98)
                      +|.++++|+..  ...| +|.|++||+|+-
T Consensus        14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~   43 (145)
T 2i9a_A           14 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQH   43 (145)
T ss_dssp             CCCTTCEEEECSSSTTCEEEECCTTEESTT
T ss_pred             CCCCCCCcCCCccccCCccccCCCCCCCCc
Confidence            79999999875  2455 899999999853

>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1

Probab=89.73  E-value=0.18  Score=30.01  Aligned_cols=23  Identities=39%  Similarity=0.934  Sum_probs=18.1

Q ss_pred             CcEEe---cCCCCeEEcCCCcEeCCCCC
Q psy5614           6 WIQCS---MQSNPSCSCLPNYIGAPPNC   30 (98)
Q Consensus         6 ~a~C~---~~g~~~C~C~~Gy~Gdg~~C   30 (98)
                      |++|+   ..+.+.|.|.+||+|  ..|
T Consensus        50 nG~C~~i~~~~~~~C~C~~GYtG--~RC   75 (79)
T 1xdt_R           50 HGECKYVKELRAPSCICHPGYHG--ERC   75 (79)
T ss_dssp             SEEECCBGGGTBCCEEECTTEES--TTC
T ss_pred             CCEeeeecCCCCeEEEcCCCccc--ccc
Confidence            45896   346899999999999  555

>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}

Probab=89.24  E-value=0.22  Score=35.01  Aligned_cols=34  Identities=24%  Similarity=0.638  Sum_probs=24.6

Q ss_pred             CCCCCCCeeEecCCccEEeCCCCCee-CCCCCCccCC
Q psy5614          57 GSCGYNAQCKVINHTPICTCPEGYIG-DPFSSCFPKP   92 (98)
Q Consensus        57 ~~C~~~a~C~~~~g~~~C~C~~Gy~G-~g~~~C~~~~   92 (98)
                      +.|.  -.|.++.++|+|.|.+||.- .....|.+.+
T Consensus        11 ~~C~--~~C~~~~~~~~C~C~~G~~l~~d~~sC~p~~   45 (283)
T 3f1s_B           11 DGCQ--HFCLPGQESYTCSCAQGYRLGEDHKQCVPHD   45 (283)
T ss_dssp             SSCS--SBCCCCTTSCCCBCCTTEEECTTSSCEEECS
T ss_pred             CCCC--CEeeCCCCCeEecCCCCcccCCCCCcccccc
Confidence            3554  36888999999999999984 2233788753

>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=88.51  E-value=0.22  Score=31.93  Aligned_cols=25  Identities=32%  Similarity=0.654  Sum_probs=19.7

Q ss_pred             cEEe-cCCCCeEEcCCCcEe--CCCCCc
Q psy5614           7 IQCS-MQSNPSCSCLPNYIG--APPNCR   31 (98)
Q Consensus         7 a~C~-~~g~~~C~C~~Gy~G--dg~~C~   31 (98)
                      ..|. ..++|+|.|.+||+.  |+..|.
T Consensus       130 ~~C~n~~g~~~C~C~~Gy~l~~~~~~C~  157 (159)
T 1nzi_A          130 HFCNNFIGGYFCSCPPEYFLHDDMKNCG  157 (159)
T ss_dssp             SEEEEETTEEEEECCTTCEECTTSSCEE
T ss_pred             CcccCcCCCEEEecCCCcEECCCCCccc
Confidence            3688 888999999999984  455554

>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*

Probab=88.19  E-value=0.39  Score=40.59  Aligned_cols=31  Identities=23%  Similarity=0.570  Sum_probs=27.3

Q ss_pred             CCCC-CCCCCCCeeEecCCccEEeCC-CCCeeC
Q psy5614          53 DPCP-GSCGYNAQCKVINHTPICTCP-EGYIGD   83 (98)
Q Consensus        53 d~C~-~~C~~~a~C~~~~g~~~C~C~-~Gy~G~   83 (98)
                      +.|. .+|.++++|+....+|+|.|+ +||+|.
T Consensus      1018 ~~C~~~pC~ngG~C~~~~~~~~C~C~~~g~~G~ 1050 (1245)
T 3qcw_A         1018 TTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGP 1050 (1245)
T ss_dssp             CCCCTTSSSSSCEEEEETTEEEEECTTSSCBST
T ss_pred             CceECCcCCCCCEeCCCCCCCEEECCCCCCCCC
Confidence            5674 799999999999899999999 699985

>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*

Probab=86.99  E-value=0.41  Score=40.45  Aligned_cols=31  Identities=32%  Similarity=0.904  Sum_probs=27.1

Q ss_pred             CCC-CCCCCCCCeeEecCCccEEeCC-CCCeeC
Q psy5614          53 DPC-PGSCGYNAQCKVINHTPICTCP-EGYIGD   83 (98)
Q Consensus        53 d~C-~~~C~~~a~C~~~~g~~~C~C~-~Gy~G~   83 (98)
                      ++| +.+|.+++.|+....+|.|.|+ +||.|.
T Consensus       620 ~~C~~~pC~ngg~C~~~~~~~~C~C~~~g~~G~  652 (1245)
T 3qcw_A          620 KPCLSNPCKNNGMCRDGWNRYVCDCSGTGYLGR  652 (1245)
T ss_dssp             CGGGSCCCCTTCEEEECSSSEEEECTTTTEEST
T ss_pred             CCCCccCCCCCCEEeCCCCCeEEECCCCCcccc
Confidence            456 3799999999998889999999 799985

>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...

Probab=86.70  E-value=0.31  Score=38.59  Aligned_cols=28  Identities=21%  Similarity=0.497  Sum_probs=23.9

Q ss_pred             CccCCcEEe--cCCCCeEEcC-CCcEeCCCCCc
Q psy5614           2 SWLMWIQCS--MQSNPSCSCL-PNYIGAPPNCR   31 (98)
Q Consensus         2 ~~~~~a~C~--~~g~~~C~C~-~Gy~Gdg~~C~   31 (98)
                      -|..+++|+  ..++|+|.|. +||+|  ..|+
T Consensus         8 PC~ngG~C~~~~~~~y~C~C~~~G~~G--~~Ce   38 (587)
T 3nt1_A            8 PCQNRGECMSTGFDQYKCDCTRTGFYG--ENCT   38 (587)
T ss_dssp             CCCTTCEEEEEETTEEEEECTTSSEET--TTTC
T ss_pred             CCCCCCEeeCCCCCCeEEecCCCCccC--CCCC
Confidence            377889999  4589999999 99999  7776

>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...

Probab=84.46  E-value=0.47  Score=37.20  Aligned_cols=28  Identities=29%  Similarity=0.580  Sum_probs=24.1

Q ss_pred             CccCCcEEe--cCCCCeEEcC-CCcEeCCCCCc
Q psy5614           2 SWLMWIQCS--MQSNPSCSCL-PNYIGAPPNCR   31 (98)
Q Consensus         2 ~~~~~a~C~--~~g~~~C~C~-~Gy~Gdg~~C~   31 (98)
                      -|..+++|+  ..++|+|.|. +||+|  ..|+
T Consensus         9 PC~ngG~C~~~~~~~y~C~C~~~G~~G--~~Ce   39 (553)
T 1q4g_A            9 PCQHQGICVRFGLDRYQCDCTRTGYSG--PNCT   39 (553)
T ss_dssp             CCCTTCEEEEETTTEEEEECTTSSEET--TTTC
T ss_pred             CCCCCCCcCCCCCCceEeeCCCCCcCC--CCCC
Confidence            377889998  5789999999 99999  6776

>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*

Probab=83.35  E-value=0.36  Score=37.55  Aligned_cols=59  Identities=19%  Similarity=0.444  Sum_probs=32.8

Q ss_pred             CCeEEcCCCcEeCCCCCcccCcCCCCCCCCceeeCCeecCCCCCCCCCCCeeEecCCccEEeCCCCCee
Q psy5614          14 NPSCSCLPNYIGAPPNCRPECVMNSECASNLACINEKCRDPCPGSCGYNAQCKVINHTPICTCPEGYIG   82 (98)
Q Consensus        14 ~~~C~C~~Gy~Gdg~~C~~eC~~~~~C~~~~~C~~~~C~d~C~~~C~~~a~C~~~~g~~~C~C~~Gy~G   82 (98)
                      ..+|.|.+||...+..|+. |..+..=   ....+..|     .+|..+.. ....|++.|.|..||..
T Consensus       262 ~G~C~C~~G~e~~~~~C~a-C~~g~~k---~~~~~~~C-----~~CP~~S~-s~~~Gs~~C~C~ng~~r  320 (536)
T 3fl7_A          262 IGQCLCQAGYEKVEDACQA-CSPGFFK---FEASESPC-----LECPEHTL-PSPEGATSCECEEGFFR  320 (536)
T ss_dssp             BCCCEECTTEEEETTEEEE-CCTTEEC---CSCCSSCC-----EECCSSEE-CCCTTCSSCEECTTCBC
T ss_pred             cCcEeccCccccCCceeee-cCCCCCc---ccCCCCcc-----ccCCCCCC-CCCCCccEEEEeccccc
Confidence            3579999999876556642 3322100   00011122     24555443 23467999999999864

>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A

Probab=81.33  E-value=0.89  Score=27.86  Aligned_cols=35  Identities=26%  Similarity=0.363  Sum_probs=29.5

Q ss_pred             CCCCCCCeeEec-CCccEEeCCCCCeeCCCCCCccCC
Q psy5614          57 GSCGYNAQCKVI-NHTPICTCPEGYIGDPFSSCFPKP   92 (98)
Q Consensus        57 ~~C~~~a~C~~~-~g~~~C~C~~Gy~G~g~~~C~~~~   92 (98)
                      ..|..||.|... .+...|.|..+|.-++. .|++.+
T Consensus        10 tkcp~NA~Cyr~~dg~EecRCllnykk~~~-kCV~~~   45 (95)
T 1b9w_A           10 TNVPENAACYRYLDGTEEWRCLLYFKEDAG-KCVPAP   45 (95)
T ss_dssp             CCCCTTEEEEECTTSCEEEEECTTEEEETT-EEEECT
T ss_pred             CCCCCCcCeEEEcCCCEEEEEECCeEecCC-EEEcCC
Confidence            368999999985 57899999999998887 688764

>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*

Probab=81.14  E-value=1.4  Score=28.52  Aligned_cols=28  Identities=29%  Similarity=0.483  Sum_probs=22.6

Q ss_pred             CccCCcEEe-c--CCCC-eEEcCCCcEeCCCCCc
Q psy5614           2 SWLMWIQCS-M--QSNP-SCSCLPNYIGAPPNCR   31 (98)
Q Consensus         2 ~~~~~a~C~-~--~g~~-~C~C~~Gy~Gdg~~C~   31 (98)
                      .|+.+++|+ .  ...+ +|.|++||.|  ..|+
T Consensus        14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~G--~~Ce   45 (145)
T 2i9a_A           14 DCLNGGTCVSNKYFSNIHWCNCPKKFGG--QHCE   45 (145)
T ss_dssp             CCCTTCEEEECSSSTTCEEEECCTTEES--TTSC
T ss_pred             CCCCCCCcCCCccccCCccccCCCCCCC--Ccee
Confidence            377889998 4  4566 8999999998  6775

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	98
d1oiga_	26	g.3.18.1 (A:) Dumpy {Fruit fly (Drosophila melanog	0.001

>d1oiga_ g.3.18.1 (A:) Dumpy {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 26

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: DPY module
family: DPY module
domain: Dumpy
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 31.6 bits (71), Expect = 0.001
 Identities = 18/24 (75%), Positives = 22/24 (91%)

Query: 31 RPECVMNSECASNLACINEKCRDP 54
          RPECV+NS+C SN AC+N+KCRDP
Sbjct: 1  RPECVLNSDCPSNQACVNQKCRDP 24

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	98
d1gl4a2	40	EGF-like domain of nidogen-1 {Mouse (Mus musculus)	99.19
d1gl4a2	40	EGF-like domain of nidogen-1 {Mouse (Mus musculus)	98.89
d2vj3a1	42	Neurogenic locus notch homolog protein 1, Notch1 {	98.8
d1emoa1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.76
d1edmb_	39	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	98.7
d2vj3a2	39	Neurogenic locus notch homolog protein 1, Notch1 {	98.69
d2vj3a3	35	Neurogenic locus notch homolog protein 1, Notch1 {	98.66
d2c4fl1	37	Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}	98.63
d1xkba1	39	Factor X, N-terminal module {Human (Homo sapiens)	98.6
d1lmja1	44	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.53
d1g1ta2	39	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	98.41
d1lmja2	42	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.37
d1g1sa2	40	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	98.31
d1apqa_	53	Complement protease C1R {Human (Homo sapiens) [Tax	98.31
d1i0ua2	41	Low density lipoprotein (LDL) receptor, different	98.14
d1nt0a3	45	Mannose-binding protein associated serine protease	98.13
d1cvua2	41	Prostaglandin H2 synthase-1, EGF-like module {Mous	98.06
d1szba2	45	Mannose-binding protein associated serine protease	98.05
d1autl1	48	Activated protein c (autoprothrombin IIa) {Human (	98.02
d1q4ga2	42	Prostaglandin H2 synthase-1, EGF-like module {Shee	98.01
d1uzka1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.0
d2vj3a1	42	Neurogenic locus notch homolog protein 1, Notch1 {	98.0
d1tpga1	41	Plasminogen activator (tissue-type), t-PA {Human (	97.96
d1uzka2	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	97.95
d1dx5i3	40	Thrombomodulin, different EGF-like domains {Human	97.89
d1emoa1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	97.85
d1nzia2	42	Complement C1S component {Human (Homo sapiens) [Ta	97.82
d2vj3a2	39	Neurogenic locus notch homolog protein 1, Notch1 {	97.78
d2c4fl1	37	Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}	97.75
d2vj3a3	35	Neurogenic locus notch homolog protein 1, Notch1 {	97.72
d1xkba1	39	Factor X, N-terminal module {Human (Homo sapiens)	97.69
d1g1ta2	39	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	97.67
d1g1sa2	40	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	97.67
d1edmb_	39	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	97.66
d3egfa_	53	Epidermal growth factor, EGF {Mouse (Mus musculus)	97.64
d1haea_	63	Heregulin-alpha, EGF-like domain {Human (Homo sapi	97.56
d1apqa_	53	Complement protease C1R {Human (Homo sapiens) [Tax	97.3
d1nqlb_	48	Epidermal growth factor, EGF {Human (Homo sapiens)	97.3
d1lmja1	44	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	97.3
d3bpse1	40	Low density lipoprotein (LDL) receptor, different	97.3
d1lmja2	42	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	97.23
d1emoa2	39	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	97.15
d1tpga1	41	Plasminogen activator (tissue-type), t-PA {Human (	97.11
d1autl1	48	Activated protein c (autoprothrombin IIa) {Human (	96.99
d1szba2	45	Mannose-binding protein associated serine protease	96.89
d1uzka2	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	96.84
d1uzka1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	96.78
d1autl2	50	Activated protein c (autoprothrombin IIa) {Human (	96.74
d1cvua2	41	Prostaglandin H2 synthase-1, EGF-like module {Mous	96.69
d1q4ga2	42	Prostaglandin H2 synthase-1, EGF-like module {Shee	96.67
d3egfa_	53	Epidermal growth factor, EGF {Mouse (Mus musculus)	96.67
d1nt0a3	45	Mannose-binding protein associated serine protease	96.63
d2p3ua1	51	Factor X, N-terminal module {Human (Homo sapiens)	96.57
d1nqlb_	48	Epidermal growth factor, EGF {Human (Homo sapiens)	96.56
d1haea_	63	Heregulin-alpha, EGF-like domain {Human (Homo sapi	96.48
d1dx5i3	40	Thrombomodulin, different EGF-like domains {Human	96.46
d1i0ua2	41	Low density lipoprotein (LDL) receptor, different	96.24
d1kigl_	51	Factor X, N-terminal module {Cow (Bos taurus) [Tax	96.01
d1nzia2	42	Complement C1S component {Human (Homo sapiens) [Ta	95.97
d1ioxa_	50	Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]	95.64
d1moxc_	49	Transforming growth factor alpha {Human (Homo sapi	95.41
d1k36a_	46	Epiregulin, EGF-domain {Human (Homo sapiens) [TaxI	95.37
d3bpse1	40	Low density lipoprotein (LDL) receptor, different	95.19
d1ijqa2	50	Low density lipoprotein (LDL) receptor, different	94.63
d1ioxa_	50	Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]	94.23
d1moxc_	49	Transforming growth factor alpha {Human (Homo sapi	94.13
d1rfnb_	57	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	93.85
d1k36a_	46	Epiregulin, EGF-domain {Human (Homo sapiens) [TaxI	93.44
d2i9aa1	40	Plasminogen activator (urokinase-type) {Human (Hom	92.55
d1oiga_	26	Dumpy {Fruit fly (Drosophila melanogaster) [TaxId:	92.4
d1xdtr_	41	Heparin-binding epidermal growth factor, HBEGF {Hu	92.1
d1xdtr_	41	Heparin-binding epidermal growth factor, HBEGF {Hu	91.98
d2bz6l1	53	Coagulation factor VIIa {Human (Homo sapiens) [Tax	91.84
d2i9aa1	40	Plasminogen activator (urokinase-type) {Human (Hom	91.68
d2p3ua1	51	Factor X, N-terminal module {Human (Homo sapiens)	91.13
d1autl2	50	Activated protein c (autoprothrombin IIa) {Human (	90.44
d1emoa2	39	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	89.18
d1kloa1	55	Laminin gamma1 chain {Mouse (Mus musculus) [TaxId:	88.93
d1dx5i1	43	Thrombomodulin, different EGF-like domains {Human	87.7

>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-like domain of nidogen-1
domain: EGF-like domain of nidogen-1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.19  E-value=3e-12  Score=67.14  Aligned_cols=33  Identities=24%  Similarity=0.643  Sum_probs=31.0

Q ss_pred             CCCCCCCeeEecCCccEEeCCCCCeeCCCCCCcc
Q psy5614          57 GSCGYNAQCKVINHTPICTCPEGYIGDPFSSCFP   90 (98)
Q Consensus        57 ~~C~~~a~C~~~~g~~~C~C~~Gy~G~g~~~C~~   90 (98)
                      +.|+.+|.|+|+.|+|+|+|++||+|||+ .|+|
T Consensus         7 ~~C~~~A~C~Nt~Gsy~C~C~~Gy~GdG~-~C~~   39 (40)
T d1gl4a2           7 HQCSVHAECRDYATGFCCRCVANYTGNGR-QCVA   39 (40)
T ss_dssp             GGSCTTEEEEECSSCEEEEECTTEEECSS-SEEE
T ss_pred             CCCCCCCEeecCCCCeEeECCCCCcCCCC-EeeC
Confidence            57999999999999999999999999998 7876

>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-like domain of nidogen-1
domain: EGF-like domain of nidogen-1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.89  E-value=4.1e-10  Score=58.76  Aligned_cols=31  Identities=23%  Similarity=0.625  Sum_probs=28.5

Q ss_pred             CccCCcEEe-cCCCCeEEcCCCcEeCCCCCcc
Q psy5614           2 SWLMWIQCS-MQSNPSCSCLPNYIGAPPNCRP   32 (98)
Q Consensus         2 ~~~~~a~C~-~~g~~~C~C~~Gy~Gdg~~C~~   32 (98)
                      .|+++|+|+ +.|+|+|.|++||+|||..|.+
T Consensus         8 ~C~~~A~C~Nt~Gsy~C~C~~Gy~GdG~~C~~   39 (40)
T d1gl4a2           8 QCSVHAECRDYATGFCCRCVANYTGNGRQCVA   39 (40)
T ss_dssp             GSCTTEEEEECSSCEEEEECTTEEECSSSEEE
T ss_pred             CCCCCCEeecCCCCeEeECCCCCcCCCCEeeC
Confidence            388999999 9999999999999999998864

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.80  E-value=2.1e-09  Score=56.38  Aligned_cols=31  Identities=29%  Similarity=0.714  Sum_probs=27.9

Q ss_pred             CCCC---CCCCCCCeeEecCCccEEeCCCCCeeC
Q psy5614          53 DPCP---GSCGYNAQCKVINHTPICTCPEGYIGD   83 (98)
Q Consensus        53 d~C~---~~C~~~a~C~~~~g~~~C~C~~Gy~G~   83 (98)
                      |||.   ++|.++|+|+++.++|+|.|++||+|+
T Consensus         4 deC~~~~~pC~n~g~C~n~~g~y~C~C~~G~~G~   37 (42)
T d2vj3a1           4 DECSLGANPCEHAGKCINTLGSFECQCLQGYTGP   37 (42)
T ss_dssp             CTTTSSSCSSSTTCEEEECSSSEEEECCTTEEST
T ss_pred             ccccCCCCCCCCCcEeECCCCCEEeECCCCCcCC
Confidence            4553   799999999999999999999999986

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.76  E-value=1.1e-09  Score=57.90  Aligned_cols=36  Identities=31%  Similarity=0.603  Sum_probs=29.9

Q ss_pred             CCCC-CCCCCCCeeEecCCccEEeCCCCCeeCCCCCCc
Q psy5614          53 DPCP-GSCGYNAQCKVINHTPICTCPEGYIGDPFSSCF   89 (98)
Q Consensus        53 d~C~-~~C~~~a~C~~~~g~~~C~C~~Gy~G~g~~~C~   89 (98)
                      |||. ..+..++.|+|+.|+|+|.|++||++++. .|+
T Consensus         6 dEC~~~~~~~~~~C~Nt~Gsy~C~C~~Gy~~~g~-~C~   42 (43)
T d1emoa1           6 DECKEPDVCKHGQCINTDGSYRCECPFGYILAGN-ECV   42 (43)
T ss_dssp             CSSSSTTSCSSSCCCCCSSCCCCCCCTTEEESSS-CEE
T ss_pred             eccCCcCCCCCCEeECCCCCeEeECCCCcccCCC-ccc
Confidence            6674 44556899999999999999999999986 575

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.70  E-value=7.3e-09  Score=53.55  Aligned_cols=32  Identities=31%  Similarity=0.663  Sum_probs=28.8

Q ss_pred             CCCC-CCCCCCCeeEecCCccEEeCCCCCeeCC
Q psy5614          53 DPCP-GSCGYNAQCKVINHTPICTCPEGYIGDP   84 (98)
Q Consensus        53 d~C~-~~C~~~a~C~~~~g~~~C~C~~Gy~G~g   84 (98)
                      |+|. ++|.++|+|++..++|+|.|++||+|+.
T Consensus         4 d~C~~~PC~ngg~C~~~~~~y~C~C~~g~~G~~   36 (39)
T d1edmb_           4 DQCESNPCLNGGSCKDDINSYECWCPFGFEGKN   36 (39)
T ss_dssp             CTTTTCCCCTTCEEEEETTEEEEECCTTCCSTT
T ss_pred             ccCCCCCCCCCcEEEcCCCCEEEECCCCCCCCC
Confidence            6774 8999999999999999999999999963

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.69  E-value=8e-09  Score=53.41  Aligned_cols=31  Identities=29%  Similarity=0.596  Sum_probs=28.4

Q ss_pred             CCCC-CCCCCCCeeEecCCccEEeCCCCCeeC
Q psy5614          53 DPCP-GSCGYNAQCKVINHTPICTCPEGYIGD   83 (98)
Q Consensus        53 d~C~-~~C~~~a~C~~~~g~~~C~C~~Gy~G~   83 (98)
                      |+|. +||.++++|++..++|+|.|++||+|.
T Consensus         2 d~C~~~PC~n~g~C~~~~~~y~C~C~~G~~G~   33 (39)
T d2vj3a2           2 NECVSNPCQNDATCLDQIGEFQCICMPGYEGV   33 (39)
T ss_dssp             CTTTTCCCCSSCEEEECSSCEEEECCTTEESS
T ss_pred             cCCcCCCCCCCCEEECCCCCEEEeCCCCCccC
Confidence            5674 899999999999999999999999995

>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.66  E-value=1.2e-08  Score=51.48  Aligned_cols=31  Identities=32%  Similarity=0.785  Sum_probs=28.2

Q ss_pred             CCCC-CCCCCCCeeEecCCccEEeCCCCCeeC
Q psy5614          53 DPCP-GSCGYNAQCKVINHTPICTCPEGYIGD   83 (98)
Q Consensus        53 d~C~-~~C~~~a~C~~~~g~~~C~C~~Gy~G~   83 (98)
                      |+|. ++|.++++|++..++|+|.|++||+|+
T Consensus         1 d~C~~~PC~ngg~C~~~~~~y~C~C~~g~~G~   32 (35)
T d2vj3a3           1 DECASSPCLHNGRCLDKINEFQCECPTGFTGH   32 (35)
T ss_dssp             CTTTTCCSTTTCEEEECSSCEEEECCTTEESS
T ss_pred             CCCCCCCCCCCcEEECCCCCeEEECCCCCCCC
Confidence            5674 899999999999999999999999995

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.63  E-value=8.5e-09  Score=52.72  Aligned_cols=31  Identities=29%  Similarity=0.699  Sum_probs=28.0

Q ss_pred             CCCC-CCCCCCCeeEecCCccEEeCCCCCeeC
Q psy5614          53 DPCP-GSCGYNAQCKVINHTPICTCPEGYIGD   83 (98)
Q Consensus        53 d~C~-~~C~~~a~C~~~~g~~~C~C~~Gy~G~   83 (98)
                      |+|. +||.++++|++..++|+|+|++||+|+
T Consensus         3 d~C~~~PC~ngg~C~~~~~~y~C~C~~g~~G~   34 (37)
T d2c4fl1           3 DQCASSPCQNGGSCKDQLQSYICFCLPAFEGR   34 (37)
T ss_dssp             CGGGGCCCCTTCEEEEETTEEEEECCTTEEST
T ss_pred             ccCCCCCCCCCCEEECCCCCeEEECCCCCcCC
Confidence            4563 799999999999999999999999996

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.60  E-value=1.3e-08  Score=52.64  Aligned_cols=32  Identities=34%  Similarity=0.721  Sum_probs=28.5

Q ss_pred             CCCC-CCCCCCCeeEecCCccEEeCCCCCeeCC
Q psy5614          53 DPCP-GSCGYNAQCKVINHTPICTCPEGYIGDP   84 (98)
Q Consensus        53 d~C~-~~C~~~a~C~~~~g~~~C~C~~Gy~G~g   84 (98)
                      |+|. +||.++++|++..++|+|.|++||+|..
T Consensus         1 D~C~~~PC~ngg~C~~~~~~y~C~C~~G~~G~~   33 (39)
T d1xkba1           1 DQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKN   33 (39)
T ss_dssp             CTTTTCCCCSSCEECCCSSSCCEECCTTEETTT
T ss_pred             CcCCCCCCCCCcEEECCCCCEEEECCCCCCcCc
Confidence            5674 7999999999999999999999999963

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.53  E-value=2.8e-08  Score=52.53  Aligned_cols=31  Identities=35%  Similarity=0.721  Sum_probs=26.0

Q ss_pred             CCCC---CCCCCCCeeEecCCccEEeCCCCCeeCC
Q psy5614          53 DPCP---GSCGYNAQCKVINHTPICTCPEGYIGDP   84 (98)
Q Consensus        53 d~C~---~~C~~~a~C~~~~g~~~C~C~~Gy~G~g   84 (98)
                      |||.   ..|. +|.|+|+.|+|+|.|++||.++.
T Consensus         4 dEC~~~~~~C~-~~~C~Nt~Gsy~C~C~~Gy~~~~   37 (44)
T d1lmja1           4 DECRISPDLCG-RGQCVNTPGDFECKCDEGYESGF   37 (44)
T ss_dssp             CTTTTCSSTTT-TSCEEEETTEEEECCCSSEEECT
T ss_pred             cccCCCCCCCC-CCEeEcCCCCeEEeCCCCCccCC
Confidence            5563   5675 68999999999999999999974

>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.41  E-value=3.3e-08  Score=50.99  Aligned_cols=31  Identities=26%  Similarity=0.655  Sum_probs=27.7

Q ss_pred             CCCC-CCCCCCCeeEecCCccEEeCCCCCeeC
Q psy5614          53 DPCP-GSCGYNAQCKVINHTPICTCPEGYIGD   83 (98)
Q Consensus        53 d~C~-~~C~~~a~C~~~~g~~~C~C~~Gy~G~   83 (98)
                      +.|. ++|.++++|++..++|+|.|++||+|+
T Consensus         2 ~~C~~~pC~ngg~C~~~~~~~~C~C~~g~~G~   33 (39)
T d1g1ta2           2 AACTNTSCSGHGECVETINNYTCKCDPGFSGL   33 (39)
T ss_dssp             CCCCTTGGGGSEEEEEETTEEEEEECTTEEST
T ss_pred             CcccCCcCCCCcEEECCCCCEEEeCCCCCcCc
Confidence            3563 799999999999999999999999996

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.37  E-value=6.7e-08  Score=50.48  Aligned_cols=25  Identities=24%  Similarity=0.485  Sum_probs=22.1

Q ss_pred             CCCCCCCeeEecCCccEEeCCCCCee
Q psy5614          57 GSCGYNAQCKVINHTPICTCPEGYIG   82 (98)
Q Consensus        57 ~~C~~~a~C~~~~g~~~C~C~~Gy~G   82 (98)
                      ..|. ++.|+|+.|+|+|.|++||+.
T Consensus        10 ~~C~-~~~C~Nt~Gsy~C~C~~Gy~l   34 (42)
T d1lmja2          10 LLCR-GGVCHNTEGSYRCECPPGHQL   34 (42)
T ss_dssp             STTT-TSEEEEETTEEEEESCTTSCC
T ss_pred             CCCC-CCEeECCCCCeEEeCCCCCeE
Confidence            5674 789999999999999999984

>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.31  E-value=8.5e-08  Score=49.63  Aligned_cols=31  Identities=26%  Similarity=0.644  Sum_probs=27.5

Q ss_pred             CCC-CCCCCCCeeEecCCccEEeCCCCCeeCC
Q psy5614          54 PCP-GSCGYNAQCKVINHTPICTCPEGYIGDP   84 (98)
Q Consensus        54 ~C~-~~C~~~a~C~~~~g~~~C~C~~Gy~G~g   84 (98)
                      .|. ++|.++++|+...++|+|.|++||+|+.
T Consensus         3 ~C~~~pC~ngg~C~~~~~~y~C~C~~g~~G~~   34 (40)
T d1g1sa2           3 SCQDMSCSKQGECLETIGNYTCSCYPGFYGPE   34 (40)
T ss_dssp             CCCTTGGGGSEEEEECSSSEEEEECTTEESTT
T ss_pred             cccCCcCCCCcEEECCCCCeEEeCCCCccCCC
Confidence            453 7999999999999999999999999953

>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement protease C1R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.31  E-value=3.4e-07  Score=49.80  Aligned_cols=31  Identities=26%  Similarity=0.487  Sum_probs=25.1

Q ss_pred             CCCCCeeEecCCccEEeCCCCCe--eCCCCCCcc
Q psy5614          59 CGYNAQCKVINHTPICTCPEGYI--GDPFSSCFP   90 (98)
Q Consensus        59 C~~~a~C~~~~g~~~C~C~~Gy~--G~g~~~C~~   90 (98)
                      ++-...|+|++|+|+|.|++||+  +|+. .|++
T Consensus        20 ~~c~~~C~Nt~GsY~C~C~~Gy~l~~d~~-tC~~   52 (53)
T d1apqa_          20 PQCQHLCHNYVGGYFCSCRPGYELQEDRH-SCQA   52 (53)
T ss_dssp             CTTSSEEEEETTEEEEECSTTCEECTTSS-CEEC
T ss_pred             CCccCEeEcCCCCeEeECCCCCeECCCCC-ceec
Confidence            44456899999999999999998  5665 5764

>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.14  E-value=7.9e-07  Score=46.01  Aligned_cols=36  Identities=25%  Similarity=0.629  Sum_probs=27.4

Q ss_pred             CCCC--CCCCCCCeeEecCCccEEeCCCCCee--CCCCCCccC
Q psy5614          53 DPCP--GSCGYNAQCKVINHTPICTCPEGYIG--DPFSSCFPK   91 (98)
Q Consensus        53 d~C~--~~C~~~a~C~~~~g~~~C~C~~Gy~G--~g~~~C~~~   91 (98)
                      |||.  ++|  ...|+|+.|+|+|.|++||+-  |+. .|+++
T Consensus         2 dEC~~~~~C--~~~C~n~~Gsy~C~C~~Gy~L~~d~~-~C~ai   41 (41)
T d1i0ua2           2 DECQDPDTC--SQLCVNLEGGYKCQCEEGFQLDPHTK-ACKAV   41 (41)
T ss_dssp             CTTTTTTSC--SSCEECSSSCCEECCCTTEEECTTTC-CEEEC
T ss_pred             ccCCCCCCC--CCEeECCCCCEEeECCCCCeECCCCC-ccccC
Confidence            4553  456  458999999999999999984  555 67654

>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.13  E-value=9.4e-07  Score=46.54  Aligned_cols=30  Identities=23%  Similarity=0.540  Sum_probs=24.5

Q ss_pred             CCCCeeEecCCccEEeCCCCCe--eCCCCCCcc
Q psy5614          60 GYNAQCKVINHTPICTCPEGYI--GDPFSSCFP   90 (98)
Q Consensus        60 ~~~a~C~~~~g~~~C~C~~Gy~--G~g~~~C~~   90 (98)
                      +-.+.|+|+.|+|+|.|++||.  .|+. .|+.
T Consensus        13 ~C~~~C~Nt~gsy~C~C~~Gy~L~~d~~-tC~~   44 (45)
T d1nt0a3          13 PCDHYCHNYLGGYYCSCRVGYILHQNKH-TCSA   44 (45)
T ss_dssp             CCSSEEEEETTEEEEECCTTEEECTTSS-CEEE
T ss_pred             CCCCEeecCCCCEEEeCCCCCEECCCCC-cccc
Confidence            3367999999999999999996  5665 6764

>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.06  E-value=1.9e-06  Score=44.58  Aligned_cols=31  Identities=26%  Similarity=0.801  Sum_probs=26.2

Q ss_pred             CCCC-CCCCCCCeeEec-CCccEEeCC-CCCeeC
Q psy5614          53 DPCP-GSCGYNAQCKVI-NHTPICTCP-EGYIGD   83 (98)
Q Consensus        53 d~C~-~~C~~~a~C~~~-~g~~~C~C~-~Gy~G~   83 (98)
                      |+|. ++|.++++|++. .++|+|.|+ +||+|.
T Consensus         2 d~C~~~PC~ngG~C~~~~~~~y~C~C~~~gy~G~   35 (41)
T d1cvua2           2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGE   35 (41)
T ss_dssp             CTTTTCCCCTTCEEEEEETTEEEEECTTSSEETT
T ss_pred             CcCcCCCCCCCCEEEECCCCCEEEeCcCCCcCCc
Confidence            5674 899999999985 578999996 699995

>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.05  E-value=2e-06  Score=45.21  Aligned_cols=30  Identities=20%  Similarity=0.522  Sum_probs=24.4

Q ss_pred             CCCCeeEecCCccEEeCCCCCe--eCCCCCCcc
Q psy5614          60 GYNAQCKVINHTPICTCPEGYI--GDPFSSCFP   90 (98)
Q Consensus        60 ~~~a~C~~~~g~~~C~C~~Gy~--G~g~~~C~~   90 (98)
                      +-.+.|+|+.|+|+|.|++||.  .|+. .|+.
T Consensus        13 ~C~~~C~Nt~Gsy~C~C~~Gy~l~~d~~-tC~D   44 (45)
T d1szba2          13 TCDHHCHNHLGGFYCSCRAGYVLHRNKR-TCSE   44 (45)
T ss_dssp             SSSSEEEEETTEEEEECCTTEEECTTSS-CEEE
T ss_pred             CCCCCCccCCCCeEEECCCCCeECCCCC-CccC
Confidence            3467999999999999999998  5555 5754

>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.02  E-value=8e-07  Score=47.57  Aligned_cols=31  Identities=29%  Similarity=0.628  Sum_probs=26.6

Q ss_pred             CCCC-CCCCCCCeeEecCCccEEeCCCCCeeCC
Q psy5614          53 DPCP-GSCGYNAQCKVINHTPICTCPEGYIGDP   84 (98)
Q Consensus        53 d~C~-~~C~~~a~C~~~~g~~~C~C~~Gy~G~g   84 (98)
                      |+|. ++|.+ ++|++..++|+|.|++||+|+.
T Consensus         9 ~~C~~~PC~n-G~C~~~~~~y~C~C~~G~~G~~   40 (48)
T d1autl1           9 HPCASLCCGH-GTCIDGIGSFSCDCRSGWEGRF   40 (48)
T ss_dssp             CSSSSTTTTS-EEECCCSSCCCEEECTTEESTT
T ss_pred             CcccCCCCCC-CEEECCCCCCeEeCCCCCcCCC
Confidence            5674 79975 8999999999999999999853

>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=98.01  E-value=1.6e-06  Score=45.06  Aligned_cols=32  Identities=28%  Similarity=0.670  Sum_probs=26.3

Q ss_pred             CCCC-CCCCCCCeeEec-CCccEEeCCC-CCeeCC
Q psy5614          53 DPCP-GSCGYNAQCKVI-NHTPICTCPE-GYIGDP   84 (98)
Q Consensus        53 d~C~-~~C~~~a~C~~~-~g~~~C~C~~-Gy~G~g   84 (98)
                      |+|. ++|.++++|+.. .++|+|.|++ ||+|.-
T Consensus         3 d~C~~nPC~ngG~C~~~~~~~y~C~C~~~G~~G~~   37 (42)
T d1q4ga2           3 NPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPN   37 (42)
T ss_dssp             CGGGGCCCCTTCEEEEETTTEEEEECTTSSEETTT
T ss_pred             ccCcCCCCCCCCEeeeCCCCCEEEECCCCCcCCcC
Confidence            4563 799999999986 5799999986 999953

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.00  E-value=2e-06  Score=44.77  Aligned_cols=23  Identities=26%  Similarity=0.684  Sum_probs=20.6

Q ss_pred             CCeeEecCCccEEeCCCCCeeCC
Q psy5614          62 NAQCKVINHTPICTCPEGYIGDP   84 (98)
Q Consensus        62 ~a~C~~~~g~~~C~C~~Gy~G~g   84 (98)
                      ++.|+|+.|+|+|.|++||..+.
T Consensus        14 ~~~C~Nt~G~y~C~C~~Gy~l~~   36 (43)
T d1uzka1          14 SGNCVNTPGSYICDCPPDFELNP   36 (43)
T ss_dssp             TSEEEEETTEEEEECCTTCEECT
T ss_pred             CCEeECCCCCEEEecCCCCEECC
Confidence            68999999999999999998653

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.00  E-value=2e-06  Score=44.58  Aligned_cols=28  Identities=29%  Similarity=0.654  Sum_probs=24.7

Q ss_pred             CccCCcEEe-cCCCCeEEcCCCcEeCCCCCc
Q psy5614           2 SWLMWIQCS-MQSNPSCSCLPNYIGAPPNCR   31 (98)
Q Consensus         2 ~~~~~a~C~-~~g~~~C~C~~Gy~Gdg~~C~   31 (98)
                      .|..+|+|+ ..++|+|.|++||+|  ..|+
T Consensus        12 pC~n~g~C~n~~g~y~C~C~~G~~G--~~Ce   40 (42)
T d2vj3a1          12 PCEHAGKCINTLGSFECQCLQGYTG--PRCE   40 (42)
T ss_dssp             SSSTTCEEEECSSSEEEECCTTEES--TTSC
T ss_pred             CCCCCcEeECCCCCEEeECCCCCcC--CCCc
Confidence            488999999 999999999999999  5653

>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (tissue-type), t-PA
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.96  E-value=4.6e-06  Score=43.00  Aligned_cols=27  Identities=30%  Similarity=0.776  Sum_probs=23.9

Q ss_pred             CCCCCCCeeEec--CCccEEeCCCCCeeC
Q psy5614          57 GSCGYNAQCKVI--NHTPICTCPEGYIGD   83 (98)
Q Consensus        57 ~~C~~~a~C~~~--~g~~~C~C~~Gy~G~   83 (98)
                      +||.++++|+..  .++|+|.|++||+|+
T Consensus         4 nPC~ngG~C~~~~~~~~y~C~C~~g~~G~   32 (41)
T d1tpga1           4 PRCFNGGTCQQALYFSDFVCQCPEGFAGK   32 (41)
T ss_dssp             CCSCTTCEEEEESSSSCEEEECCTTCBSS
T ss_pred             CCCCCCCEEecCCCCCCeEECCCCCCCCC
Confidence            699999999985  358999999999995

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.95  E-value=8e-07  Score=46.44  Aligned_cols=26  Identities=31%  Similarity=0.732  Sum_probs=22.1

Q ss_pred             CCCCCCCeeEecCCccEEeCCCCCeeC
Q psy5614          57 GSCGYNAQCKVINHTPICTCPEGYIGD   83 (98)
Q Consensus        57 ~~C~~~a~C~~~~g~~~C~C~~Gy~G~   83 (98)
                      +.|. ++.|+|+.|+|+|.|++||+.+
T Consensus        11 ~~c~-~~~C~Nt~Gsy~C~C~~Gy~l~   36 (43)
T d1uzka2          11 GLCQ-GGKCINTFGSFQCRCPTGYYLN   36 (43)
T ss_dssp             GGGB-TSEEEECSSCEEEECCTTCCBC
T ss_pred             CCcC-CCEEECCCCCeEeECCCCCeEC
Confidence            4564 5799999999999999999854

>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.89  E-value=6.6e-07  Score=46.19  Aligned_cols=26  Identities=23%  Similarity=0.418  Sum_probs=22.6

Q ss_pred             CCCCCCCeeEecCCccEEeCCCCCeeCC
Q psy5614          57 GSCGYNAQCKVINHTPICTCPEGYIGDP   84 (98)
Q Consensus        57 ~~C~~~a~C~~~~g~~~C~C~~Gy~G~g   84 (98)
                      ++|.  +.|+|+.|+|+|.|++||+.++
T Consensus         9 ~~C~--~~C~N~~Gsy~C~C~~Gy~l~g   34 (40)
T d1dx5i3           9 GFCS--GVCHNLPGTFECICGPDSALAG   34 (40)
T ss_dssp             SSCS--SEEEECSSSEEEEECSSSSCEE
T ss_pred             cCcc--CEeeCCCCCeEeECCCCCeeCC
Confidence            5674  6999999999999999998765

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.85  E-value=2.3e-06  Score=44.64  Aligned_cols=28  Identities=29%  Similarity=0.450  Sum_probs=24.4

Q ss_pred             cCCcEEe-cCCCCeEEcCCCcEeCCCCCc
Q psy5614           4 LMWIQCS-MQSNPSCSCLPNYIGAPPNCR   31 (98)
Q Consensus         4 ~~~a~C~-~~g~~~C~C~~Gy~Gdg~~C~   31 (98)
                      ..++.|+ +.|+|.|.|++||++++..|.
T Consensus        14 ~~~~~C~Nt~Gsy~C~C~~Gy~~~g~~C~   42 (43)
T d1emoa1          14 CKHGQCINTDGSYRCECPFGYILAGNECV   42 (43)
T ss_dssp             CSSSCCCCCSSCCCCCCCTTEEESSSCEE
T ss_pred             CCCCEeECCCCCeEeECCCCcccCCCccc
Confidence            3578899 999999999999999887774

>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement C1S component
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.82  E-value=1e-05  Score=41.94  Aligned_cols=31  Identities=26%  Similarity=0.575  Sum_probs=24.9

Q ss_pred             CCCCCCCeeEecCCccEEeCCCCCe--eCCCCCCcc
Q psy5614          57 GSCGYNAQCKVINHTPICTCPEGYI--GDPFSSCFP   90 (98)
Q Consensus        57 ~~C~~~a~C~~~~g~~~C~C~~Gy~--G~g~~~C~~   90 (98)
                      +.|.  ..|+|+.|+|+|.|++||+  .|+. .|++
T Consensus         9 ~~C~--~~C~n~~Gsy~C~C~~Gy~L~~d~~-tC~~   41 (42)
T d1nzia2           9 VPCS--HFCNNFIGGYFCSCPPEYFLHDDMK-NCGV   41 (42)
T ss_dssp             CCSS--SEEEEETTEEEEECCTTCEECTTSS-CEEC
T ss_pred             cCCC--CEeecCCCCEEEeCCCCCEECCCCC-eecC
Confidence            4574  4899999999999999998  4565 6764

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.78  E-value=8.5e-06  Score=41.56  Aligned_cols=28  Identities=25%  Similarity=0.581  Sum_probs=24.7

Q ss_pred             CccCCcEEe-cCCCCeEEcCCCcEeCCCCCc
Q psy5614           2 SWLMWIQCS-MQSNPSCSCLPNYIGAPPNCR   31 (98)
Q Consensus         2 ~~~~~a~C~-~~g~~~C~C~~Gy~Gdg~~C~   31 (98)
                      -|..+++|+ ..++|+|.|++||+|  ..|+
T Consensus         8 PC~n~g~C~~~~~~y~C~C~~G~~G--~~Ce   36 (39)
T d2vj3a2           8 PCQNDATCLDQIGEFQCICMPGYEG--VHCE   36 (39)
T ss_dssp             CCCSSCEEEECSSCEEEECCTTEES--SSSC
T ss_pred             CCCCCCEEECCCCCEEEeCCCCCcc--CcCe
Confidence            478899999 999999999999999  6664

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.75  E-value=7.6e-06  Score=41.28  Aligned_cols=27  Identities=30%  Similarity=0.586  Sum_probs=24.0

Q ss_pred             CccCCcEEe-cCCCCeEEcCCCcEeCCCCC
Q psy5614           2 SWLMWIQCS-MQSNPSCSCLPNYIGAPPNC   30 (98)
Q Consensus         2 ~~~~~a~C~-~~g~~~C~C~~Gy~Gdg~~C   30 (98)
                      -|..+++|+ ..++|+|.|++||+|  ..|
T Consensus         9 PC~ngg~C~~~~~~y~C~C~~g~~G--~~C   36 (37)
T d2c4fl1           9 PCQNGGSCKDQLQSYICFCLPAFEG--RNC   36 (37)
T ss_dssp             CCCTTCEEEEETTEEEEECCTTEES--TTS
T ss_pred             CCCCCCEEECCCCCeEEECCCCCcC--CCC
Confidence            478899999 999999999999999  555

>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.72  E-value=1.2e-05  Score=40.02  Aligned_cols=27  Identities=22%  Similarity=0.491  Sum_probs=23.8

Q ss_pred             CccCCcEEe-cCCCCeEEcCCCcEeCCCCC
Q psy5614           2 SWLMWIQCS-MQSNPSCSCLPNYIGAPPNC   30 (98)
Q Consensus         2 ~~~~~a~C~-~~g~~~C~C~~Gy~Gdg~~C   30 (98)
                      -|..+++|+ ..++|+|.|++||+|  ..|
T Consensus         7 PC~ngg~C~~~~~~y~C~C~~g~~G--~~C   34 (35)
T d2vj3a3           7 PCLHNGRCLDKINEFQCECPTGFTG--HLC   34 (35)
T ss_dssp             CSTTTCEEEECSSCEEEECCTTEES--SSS
T ss_pred             CCCCCcEEECCCCCeEEECCCCCCC--CCc
Confidence            378899999 888999999999999  555

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.69  E-value=1.2e-05  Score=40.92  Aligned_cols=28  Identities=25%  Similarity=0.579  Sum_probs=24.4

Q ss_pred             CccCCcEEe-cCCCCeEEcCCCcEeCCCCCc
Q psy5614           2 SWLMWIQCS-MQSNPSCSCLPNYIGAPPNCR   31 (98)
Q Consensus         2 ~~~~~a~C~-~~g~~~C~C~~Gy~Gdg~~C~   31 (98)
                      -|..+++|+ ..++|+|.|++||+|  ..|+
T Consensus         7 PC~ngg~C~~~~~~y~C~C~~G~~G--~~Ce   35 (39)
T d1xkba1           7 PCQNQGKCKDGLGEYTCTCLEGFEG--KNCE   35 (39)
T ss_dssp             CCCSSCEECCCSSSCCEECCTTEET--TTTC
T ss_pred             CCCCCcEEECCCCCEEEECCCCCCc--CcCe
Confidence            378899999 889999999999999  5664

>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.67  E-value=9.9e-06  Score=41.27  Aligned_cols=28  Identities=29%  Similarity=0.602  Sum_probs=24.5

Q ss_pred             CccCCcEEe-cCCCCeEEcCCCcEeCCCCCc
Q psy5614           2 SWLMWIQCS-MQSNPSCSCLPNYIGAPPNCR   31 (98)
Q Consensus         2 ~~~~~a~C~-~~g~~~C~C~~Gy~Gdg~~C~   31 (98)
                      .|..+++|+ ..++|+|.|++||+|  ..|+
T Consensus         8 pC~ngg~C~~~~~~~~C~C~~g~~G--~~Ce   36 (39)
T d1g1ta2           8 SCSGHGECVETINNYTCKCDPGFSG--LKCE   36 (39)
T ss_dssp             GGGGSEEEEEETTEEEEEECTTEES--TTSC
T ss_pred             cCCCCcEEECCCCCEEEeCCCCCcC--cCcC
Confidence            377899999 999999999999999  5664

>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.67  E-value=1.3e-05  Score=41.05  Aligned_cols=28  Identities=36%  Similarity=0.789  Sum_probs=24.7

Q ss_pred             CccCCcEEe-cCCCCeEEcCCCcEeCCCCCc
Q psy5614           2 SWLMWIQCS-MQSNPSCSCLPNYIGAPPNCR   31 (98)
Q Consensus         2 ~~~~~a~C~-~~g~~~C~C~~Gy~Gdg~~C~   31 (98)
                      .|..+++|+ ..++|+|.|++||+|  ..|+
T Consensus         8 pC~ngg~C~~~~~~y~C~C~~g~~G--~~Ce   36 (40)
T d1g1sa2           8 SCSKQGECLETIGNYTCSCYPGFYG--PECE   36 (40)
T ss_dssp             GGGGSEEEEECSSSEEEEECTTEES--TTSC
T ss_pred             cCCCCcEEECCCCCeEEeCCCCccC--CCCC
Confidence            478899999 889999999999999  6664

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.66  E-value=9.5e-06  Score=41.33  Aligned_cols=27  Identities=26%  Similarity=0.448  Sum_probs=23.9

Q ss_pred             CccCCcEEe-cCCCCeEEcCCCcEeCCCCC
Q psy5614           2 SWLMWIQCS-MQSNPSCSCLPNYIGAPPNC   30 (98)
Q Consensus         2 ~~~~~a~C~-~~g~~~C~C~~Gy~Gdg~~C   30 (98)
                      -|..+++|+ ..++|+|.|++||+|  ..|
T Consensus        10 PC~ngg~C~~~~~~y~C~C~~g~~G--~~C   37 (39)
T d1edmb_          10 PCLNGGSCKDDINSYECWCPFGFEG--KNC   37 (39)
T ss_dssp             CCCTTCEEEEETTEEEEECCTTCCS--TTS
T ss_pred             CCCCCcEEEcCCCCEEEECCCCCCC--CCC
Confidence            378899999 999999999999999  555

>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.64  E-value=2.8e-05  Score=42.00  Aligned_cols=27  Identities=37%  Similarity=0.789  Sum_probs=23.6

Q ss_pred             CCCCCCCeeEecC--CccEEeCCCCCeeC
Q psy5614          57 GSCGYNAQCKVIN--HTPICTCPEGYIGD   83 (98)
Q Consensus        57 ~~C~~~a~C~~~~--g~~~C~C~~Gy~G~   83 (98)
                      ++|.++++|++..  ..|+|.|++||+|+
T Consensus        12 ~~C~NgG~C~~~~~~~~~~C~C~~gy~G~   40 (53)
T d3egfa_          12 GYCLNGGVCMHIESLDSYTCNCVIGYSGD   40 (53)
T ss_dssp             CCSCSSCEEEEESSSSCEEEECCTTCCSS
T ss_pred             CCCCCCcEeeccCCCCCeEeECCCCCcCC
Confidence            6899999998744  48999999999995

>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heregulin-alpha, EGF-like domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.56  E-value=7.7e-06  Score=45.68  Aligned_cols=28  Identities=21%  Similarity=0.593  Sum_probs=23.8

Q ss_pred             CCCCCCCeeEe-----cCCccEEeCCCCCeeCC
Q psy5614          57 GSCGYNAQCKV-----INHTPICTCPEGYIGDP   84 (98)
Q Consensus        57 ~~C~~~a~C~~-----~~g~~~C~C~~Gy~G~g   84 (98)
                      ++|.++++|..     ..++|+|.|++||+|+-
T Consensus        12 ~~C~NgG~C~~~~~~~~~~~y~C~C~~gy~G~~   44 (63)
T d1haea_          12 TFCVNGGECFMVKDLSNPSRYLCKCQPGFTGAR   44 (63)
T ss_dssp             TTSCTTCEEEEEESSSSSCCEEEECCTTEESTT
T ss_pred             CcCCCCCEEeecccccCCCCEEeECCCCCCCCC
Confidence            78999999964     44689999999999963

>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement protease C1R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.30  E-value=5.4e-05  Score=40.66  Aligned_cols=26  Identities=27%  Similarity=0.576  Sum_probs=21.3

Q ss_pred             CcEEe-cCCCCeEEcCCCcE--eCCCCCc
Q psy5614           6 WIQCS-MQSNPSCSCLPNYI--GAPPNCR   31 (98)
Q Consensus         6 ~a~C~-~~g~~~C~C~~Gy~--Gdg~~C~   31 (98)
                      ...|+ +.|+|+|.|++||+  +|+..|+
T Consensus        23 ~~~C~Nt~GsY~C~C~~Gy~l~~d~~tC~   51 (53)
T d1apqa_          23 QHLCHNYVGGYFCSCRPGYELQEDRHSCQ   51 (53)
T ss_dssp             SSEEEEETTEEEEECSTTCEECTTSSCEE
T ss_pred             cCEeEcCCCCeEeECCCCCeECCCCCcee
Confidence            45899 99999999999998  4555664

>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.30  E-value=5.3e-05  Score=40.07  Aligned_cols=31  Identities=35%  Similarity=0.758  Sum_probs=25.4

Q ss_pred             CCCCCCCeeEec--CCccEEeCCCCCeeCCCCCCcc
Q psy5614          57 GSCGYNAQCKVI--NHTPICTCPEGYIGDPFSSCFP   90 (98)
Q Consensus        57 ~~C~~~a~C~~~--~g~~~C~C~~Gy~G~g~~~C~~   90 (98)
                      ++|.++++|++.  ..+|+|.|++||+|.   .|.-
T Consensus        10 ~~C~ngG~C~~~~~~~~~~C~C~~gy~G~---~Ce~   42 (48)
T d1nqlb_          10 GYCLHDGVCMYIEALDKYACNCVVGYIGE---RCQY   42 (48)
T ss_dssp             CEECTTCEEEEETTTTEEEEEECTTEEST---TSCE
T ss_pred             CCCCCCcEEeeeCCCCCeEEeCCCCcccC---CCCc
Confidence            689999999874  358999999999985   4643

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.30  E-value=3.7e-05  Score=40.07  Aligned_cols=23  Identities=22%  Similarity=0.335  Sum_probs=20.5

Q ss_pred             CCcEEe-cCCCCeEEcCCCcEeCC
Q psy5614           5 MWIQCS-MQSNPSCSCLPNYIGAP   27 (98)
Q Consensus         5 ~~a~C~-~~g~~~C~C~~Gy~Gdg   27 (98)
                      .+++|+ +.|+|+|.|++||.++.
T Consensus        14 ~~~~C~Nt~Gsy~C~C~~Gy~~~~   37 (44)
T d1lmja1          14 GRGQCVNTPGDFECKCDEGYESGF   37 (44)
T ss_dssp             TTSCEEEETTEEEECCCSSEEECT
T ss_pred             CCCEeEcCCCCeEEeCCCCCccCC
Confidence            368999 99999999999999863

>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.30  E-value=5.7e-05  Score=38.52  Aligned_cols=23  Identities=30%  Similarity=0.902  Sum_probs=20.2

Q ss_pred             CCCCCCCeeEecCCccEEeCCCCCe
Q psy5614          57 GSCGYNAQCKVINHTPICTCPEGYI   81 (98)
Q Consensus        57 ~~C~~~a~C~~~~g~~~C~C~~Gy~   81 (98)
                      +.|.  ..|++++++|+|.|++||.
T Consensus        10 ggC~--h~C~n~~g~~~C~C~~Gy~   32 (40)
T d3bpse1          10 GGCS--HVCNDLKIGYECLCPDGFQ   32 (40)
T ss_dssp             GGCS--SEEEECSSSEEEECCTTCC
T ss_pred             CCCc--CEEEcCCCCEEEECCCCCE
Confidence            4674  4999999999999999997

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.23  E-value=6.5e-05  Score=38.61  Aligned_cols=21  Identities=19%  Similarity=0.305  Sum_probs=19.0

Q ss_pred             CCcEEe-cCCCCeEEcCCCcEe
Q psy5614           5 MWIQCS-MQSNPSCSCLPNYIG   25 (98)
Q Consensus         5 ~~a~C~-~~g~~~C~C~~Gy~G   25 (98)
                      .++.|+ +.|+|+|.|++||+-
T Consensus        13 ~~~~C~Nt~Gsy~C~C~~Gy~l   34 (42)
T d1lmja2          13 RGGVCHNTEGSYRCECPPGHQL   34 (42)
T ss_dssp             TTSEEEEETTEEEEESCTTSCC
T ss_pred             CCCEeECCCCCeEEeCCCCCeE
Confidence            478999 999999999999974

>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.15  E-value=0.00018  Score=35.77  Aligned_cols=28  Identities=43%  Similarity=0.960  Sum_probs=23.6

Q ss_pred             CCCC--CCCCCCCeeEecCCccEEeCCCCCe
Q psy5614          53 DPCP--GSCGYNAQCKVINHTPICTCPEGYI   81 (98)
Q Consensus        53 d~C~--~~C~~~a~C~~~~g~~~C~C~~Gy~   81 (98)
                      |+|+  ++|+ |++|.|..|.|.|.|..||.
T Consensus         2 dECsignpCG-nGTCtNviGgFec~C~~GFe   31 (39)
T d1emoa2           2 DECSVGNPCG-NGTCKNVIGGFECTCEEGFE   31 (39)
T ss_dssp             CGGGTTCSSS-SSCEEECSSSEEECCSSSSC
T ss_pred             CccccCCccC-CceeeecccceEEeecCCcC
Confidence            4453  6787 68999999999999999996

>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (tissue-type), t-PA
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.11  E-value=0.00015  Score=36.98  Aligned_cols=28  Identities=21%  Similarity=0.501  Sum_probs=23.2

Q ss_pred             CccCCcEEe-c--CCCCeEEcCCCcEeCCCCCc
Q psy5614           2 SWLMWIQCS-M--QSNPSCSCLPNYIGAPPNCR   31 (98)
Q Consensus         2 ~~~~~a~C~-~--~g~~~C~C~~Gy~Gdg~~C~   31 (98)
                      -|..+++|+ .  .++|+|.|++||+|  ..|+
T Consensus         5 PC~ngG~C~~~~~~~~y~C~C~~g~~G--~~Ce   35 (41)
T d1tpga1           5 RCFNGGTCQQALYFSDFVCQCPEGFAG--KSCE   35 (41)
T ss_dssp             CSCTTCEEEEESSSSCEEEECCTTCBS--SSCC
T ss_pred             CCCCCCEEecCCCCCCeEECCCCCCCC--CCcC
Confidence            378899999 3  46899999999999  6665

>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.99  E-value=0.00021  Score=37.71  Aligned_cols=26  Identities=23%  Similarity=0.416  Sum_probs=22.3

Q ss_pred             ccCCcEEe-cCCCCeEEcCCCcEeCCCCCc
Q psy5614           3 WLMWIQCS-MQSNPSCSCLPNYIGAPPNCR   31 (98)
Q Consensus         3 ~~~~a~C~-~~g~~~C~C~~Gy~Gdg~~C~   31 (98)
                      |. |++|+ ..++|+|.|++||+|  ..|+
T Consensus        16 C~-nG~C~~~~~~y~C~C~~G~~G--~~Ce   42 (48)
T d1autl1          16 CG-HGTCIDGIGSFSCDCRSGWEG--RFCQ   42 (48)
T ss_dssp             TT-SEEECCCSSCCCEEECTTEES--TTSC
T ss_pred             CC-CCEEECCCCCCeEeCCCCCcC--CCcc
Confidence            54 58999 889999999999999  6765

>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.89  E-value=0.00018  Score=37.32  Aligned_cols=26  Identities=23%  Similarity=0.525  Sum_probs=21.3

Q ss_pred             CcEEe-cCCCCeEEcCCCcE--eCCCCCc
Q psy5614           6 WIQCS-MQSNPSCSCLPNYI--GAPPNCR   31 (98)
Q Consensus         6 ~a~C~-~~g~~~C~C~~Gy~--Gdg~~C~   31 (98)
                      ...|+ +.|+|+|.|++||+  .|+..|+
T Consensus        15 ~~~C~Nt~Gsy~C~C~~Gy~l~~d~~tC~   43 (45)
T d1szba2          15 DHHCHNHLGGFYCSCRAGYVLHRNKRTCS   43 (45)
T ss_dssp             SSEEEEETTEEEEECCTTEEECTTSSCEE
T ss_pred             CCCCccCCCCeEEECCCCCeECCCCCCcc
Confidence            56899 99999999999997  4555664

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.84  E-value=0.00034  Score=35.94  Aligned_cols=20  Identities=20%  Similarity=0.349  Sum_probs=18.3

Q ss_pred             CcEEe-cCCCCeEEcCCCcEe
Q psy5614           6 WIQCS-MQSNPSCSCLPNYIG   25 (98)
Q Consensus         6 ~a~C~-~~g~~~C~C~~Gy~G   25 (98)
                      +++|+ +.|+|+|.|++||+-
T Consensus        15 ~~~C~Nt~Gsy~C~C~~Gy~l   35 (43)
T d1uzka2          15 GGKCINTFGSFQCRCPTGYYL   35 (43)
T ss_dssp             TSEEEECSSCEEEECCTTCCB
T ss_pred             CCEEECCCCCeEeECCCCCeE
Confidence            57999 999999999999975

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.78  E-value=0.00033  Score=35.90  Aligned_cols=22  Identities=18%  Similarity=0.458  Sum_probs=19.3

Q ss_pred             CCcEEe-cCCCCeEEcCCCcEeC
Q psy5614           5 MWIQCS-MQSNPSCSCLPNYIGA   26 (98)
Q Consensus         5 ~~a~C~-~~g~~~C~C~~Gy~Gd   26 (98)
                      -+++|+ +.|+|+|.|++||..+
T Consensus        13 c~~~C~Nt~G~y~C~C~~Gy~l~   35 (43)
T d1uzka1          13 ISGNCVNTPGSYICDCPPDFELN   35 (43)
T ss_dssp             BTSEEEEETTEEEEECCTTCEEC
T ss_pred             cCCEeECCCCCEEEecCCCCEEC
Confidence            367999 9999999999999764

>d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.74  E-value=0.00047  Score=36.57  Aligned_cols=30  Identities=27%  Similarity=0.500  Sum_probs=25.0

Q ss_pred             CeeEecCCccEEeCCCCCee--CCCCCCccCCC
Q psy5614          63 AQCKVINHTPICTCPEGYIG--DPFSSCFPKPP   93 (98)
Q Consensus        63 a~C~~~~g~~~C~C~~Gy~G--~g~~~C~~~~~   93 (98)
                      ..|+++.++|+|.|++||+-  |+. .|++..+
T Consensus        11 ~~C~~~~g~~~C~C~~Gy~L~~D~~-tC~~~~~   42 (50)
T d1autl2          11 HYCLEEVGWRRCSCAPGYKLGDDLL-QCHPAVK   42 (50)
T ss_dssp             SEEEECSSSEEEECCTTEEECTTSS-CEEECSS
T ss_pred             cEeecCCCCeEEECCCCCEECCCCC-ccccCCC
Confidence            48999999999999999984  565 7987654

>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.69  E-value=0.00045  Score=35.16  Aligned_cols=28  Identities=21%  Similarity=0.532  Sum_probs=22.9

Q ss_pred             CccCCcEEe-c-CCCCeEEcC-CCcEeCCCCCc
Q psy5614           2 SWLMWIQCS-M-QSNPSCSCL-PNYIGAPPNCR   31 (98)
Q Consensus         2 ~~~~~a~C~-~-~g~~~C~C~-~Gy~Gdg~~C~   31 (98)
                      -|..+++|+ . .++|+|.|. +||+|  ..|+
T Consensus         8 PC~ngG~C~~~~~~~y~C~C~~~gy~G--~~Ce   38 (41)
T d1cvua2           8 PCQNRGECMSTGFDQYKCDCTRTGFYG--ENCT   38 (41)
T ss_dssp             CCCTTCEEEEEETTEEEEECTTSSEET--TTTC
T ss_pred             CCCCCCEEEECCCCCEEEeCcCCCcCC--cCcC
Confidence            378899998 4 678999995 79999  6664

>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=96.67  E-value=0.00047  Score=35.24  Aligned_cols=27  Identities=30%  Similarity=0.647  Sum_probs=22.6

Q ss_pred             ccCCcEEe-c-CCCCeEEcCC-CcEeCCCCCc
Q psy5614           3 WLMWIQCS-M-QSNPSCSCLP-NYIGAPPNCR   31 (98)
Q Consensus         3 ~~~~a~C~-~-~g~~~C~C~~-Gy~Gdg~~C~   31 (98)
                      |..+++|+ . .++|+|.|.+ ||+|  .+|+
T Consensus        10 C~ngG~C~~~~~~~y~C~C~~~G~~G--~~Ce   39 (42)
T d1q4ga2          10 CQHQGICVRFGLDRYQCDCTRTGYSG--PNCT   39 (42)
T ss_dssp             CCTTCEEEEETTTEEEEECTTSSEET--TTTC
T ss_pred             CCCCCEeeeCCCCCEEEECCCCCcCC--cCcC
Confidence            77899998 4 6889999986 9999  6664

>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.67  E-value=0.00053  Score=36.72  Aligned_cols=27  Identities=26%  Similarity=0.573  Sum_probs=22.5

Q ss_pred             ccCCcEEe---cCCCCeEEcCCCcEeCCCCCc
Q psy5614           3 WLMWIQCS---MQSNPSCSCLPNYIGAPPNCR   31 (98)
Q Consensus         3 ~~~~a~C~---~~g~~~C~C~~Gy~Gdg~~C~   31 (98)
                      |+.+++|+   ....|+|.|++||+|  ..|+
T Consensus        14 C~NgG~C~~~~~~~~~~C~C~~gy~G--~~Ce   43 (53)
T d3egfa_          14 CLNGGVCMHIESLDSYTCNCVIGYSG--DRCQ   43 (53)
T ss_dssp             SCSSCEEEEESSSSCEEEECCTTCCS--SSSC
T ss_pred             CCCCcEeeccCCCCCeEeECCCCCcC--CCCc
Confidence            77889997   446899999999999  5664

>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.63  E-value=0.00039  Score=36.00  Aligned_cols=25  Identities=28%  Similarity=0.515  Sum_probs=20.6

Q ss_pred             CcEEe-cCCCCeEEcCCCcE--eCCCCC
Q psy5614           6 WIQCS-MQSNPSCSCLPNYI--GAPPNC   30 (98)
Q Consensus         6 ~a~C~-~~g~~~C~C~~Gy~--Gdg~~C   30 (98)
                      .+.|+ +.|+|+|.|++||+  .|+..|
T Consensus        15 ~~~C~Nt~gsy~C~C~~Gy~L~~d~~tC   42 (45)
T d1nt0a3          15 DHYCHNYLGGYYCSCRVGYILHQNKHTC   42 (45)
T ss_dssp             SSEEEEETTEEEEECCTTEEECTTSSCE
T ss_pred             CCEeecCCCCEEEeCCCCCEECCCCCcc
Confidence            56899 99999999999996  455555

>d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.57  E-value=0.00066  Score=36.09  Aligned_cols=30  Identities=27%  Similarity=0.812  Sum_probs=25.0

Q ss_pred             CeeEecCCccEEeCCCCCe--eCCCCCCccCCC
Q psy5614          63 AQCKVINHTPICTCPEGYI--GDPFSSCFPKPP   93 (98)
Q Consensus        63 a~C~~~~g~~~C~C~~Gy~--G~g~~~C~~~~~   93 (98)
                      ..|+++.++|+|.|++||.  -|+. .|.+.++
T Consensus        12 h~C~n~~g~~~C~C~~Gy~L~~D~~-tC~~~~~   43 (51)
T d2p3ua1          12 QFCHEEQNSVVCSCARGYTLADNGK-ACIPTGP   43 (51)
T ss_dssp             SEEEEETTEEEEECCTTEEECTTSS-CEEESSS
T ss_pred             cEeecCCCCeEeEcCCCCEECCCCC-ccccCCc
Confidence            4799999999999999998  4565 7988754

>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.56  E-value=0.0006  Score=35.78  Aligned_cols=27  Identities=30%  Similarity=0.656  Sum_probs=22.1

Q ss_pred             ccCCcEEe---cCCCCeEEcCCCcEeCCCCCc
Q psy5614           3 WLMWIQCS---MQSNPSCSCLPNYIGAPPNCR   31 (98)
Q Consensus         3 ~~~~a~C~---~~g~~~C~C~~Gy~Gdg~~C~   31 (98)
                      |..+++|+   ..++|+|.|.+||+|  ..|+
T Consensus        12 C~ngG~C~~~~~~~~~~C~C~~gy~G--~~Ce   41 (48)
T d1nqlb_          12 CLHDGVCMYIEALDKYACNCVVGYIG--ERCQ   41 (48)
T ss_dssp             ECTTCEEEEETTTTEEEEEECTTEES--TTSC
T ss_pred             CCCCcEEeeeCCCCCeEEeCCCCccc--CCCC
Confidence            67789997   446899999999999  5664

>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heregulin-alpha, EGF-like domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.48  E-value=0.0009  Score=36.83  Aligned_cols=27  Identities=26%  Similarity=0.592  Sum_probs=22.6

Q ss_pred             ccCCcEEe------cCCCCeEEcCCCcEeCCCCCc
Q psy5614           3 WLMWIQCS------MQSNPSCSCLPNYIGAPPNCR   31 (98)
Q Consensus         3 ~~~~a~C~------~~g~~~C~C~~Gy~Gdg~~C~   31 (98)
                      |..+++|.      ..++|+|.|++||+|  ..|+
T Consensus        14 C~NgG~C~~~~~~~~~~~y~C~C~~gy~G--~~Ce   46 (63)
T d1haea_          14 CVNGGECFMVKDLSNPSRYLCKCQPGFTG--ARCT   46 (63)
T ss_dssp             SCTTCEEEEEESSSSSCCEEEECCTTEES--TTSC
T ss_pred             CCCCCEEeecccccCCCCEEeECCCCCCC--CCcC
Confidence            77889994      446899999999999  6776

>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.46  E-value=0.00027  Score=35.94  Aligned_cols=21  Identities=24%  Similarity=0.406  Sum_probs=18.3

Q ss_pred             cEEe-cCCCCeEEcCCCcEeCC
Q psy5614           7 IQCS-MQSNPSCSCLPNYIGAP   27 (98)
Q Consensus         7 a~C~-~~g~~~C~C~~Gy~Gdg   27 (98)
                      ..|+ +.|+|+|.|++||+.++
T Consensus        13 ~~C~N~~Gsy~C~C~~Gy~l~g   34 (40)
T d1dx5i3          13 GVCHNLPGTFECICGPDSALAG   34 (40)
T ss_dssp             SEEEECSSSEEEEECSSSSCEE
T ss_pred             CEeeCCCCCeEeECCCCCeeCC
Confidence            5899 99999999999997643

>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.24  E-value=0.001  Score=33.67  Aligned_cols=25  Identities=16%  Similarity=0.547  Sum_probs=19.7

Q ss_pred             cEEe-cCCCCeEEcCCCcEe--CCCCCc
Q psy5614           7 IQCS-MQSNPSCSCLPNYIG--APPNCR   31 (98)
Q Consensus         7 a~C~-~~g~~~C~C~~Gy~G--dg~~C~   31 (98)
                      ..|+ +.|+|+|.|++||+-  |+..|+
T Consensus        12 ~~C~n~~Gsy~C~C~~Gy~L~~d~~~C~   39 (41)
T d1i0ua2          12 QLCVNLEGGYKCQCEEGFQLDPHTKACK   39 (41)
T ss_dssp             SCEECSSSCCEECCCTTEEECTTTCCEE
T ss_pred             CEeECCCCCEEeECCCCCeECCCCCccc
Confidence            4688 999999999999974  445553

>d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos taurus) [TaxId: 9913]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Cow (Bos taurus) [TaxId: 9913]

Probab=96.01  E-value=0.00069  Score=35.96  Aligned_cols=29  Identities=28%  Similarity=0.693  Sum_probs=24.0

Q ss_pred             eeEecCCccEEeCCCCCe--eCCCCCCccCCC
Q psy5614          64 QCKVINHTPICTCPEGYI--GDPFSSCFPKPP   93 (98)
Q Consensus        64 ~C~~~~g~~~C~C~~Gy~--G~g~~~C~~~~~   93 (98)
                      .|+++.++|+|.|++||.  -|+. .|+++++
T Consensus        11 ~C~~~~~~~~C~C~~Gy~L~~D~~-tC~~~~~   41 (51)
T d1kigl_          11 FCREERSEVRCSCAHGYVLGDDSK-SCVSTER   41 (51)
T ss_dssp             CCCEETTEECCCCCTTEEECTTSS-CEEECSS
T ss_pred             EeEcCCCcEEeEcCCCCEECCCCC-ccccCCc
Confidence            588999999999999997  3555 7988765

>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement C1S component
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.97  E-value=0.0014  Score=33.43  Aligned_cols=24  Identities=33%  Similarity=0.757  Sum_probs=19.4

Q ss_pred             cEEe-cCCCCeEEcCCCcE--eCCCCC
Q psy5614           7 IQCS-MQSNPSCSCLPNYI--GAPPNC   30 (98)
Q Consensus         7 a~C~-~~g~~~C~C~~Gy~--Gdg~~C   30 (98)
                      ..|+ +.|+|+|.|++||+  .|+..|
T Consensus        13 ~~C~n~~Gsy~C~C~~Gy~L~~d~~tC   39 (42)
T d1nzia2          13 HFCNNFIGGYFCSCPPEYFLHDDMKNC   39 (42)
T ss_dssp             SEEEEETTEEEEECCTTCEECTTSSCE
T ss_pred             CEeecCCCCEEEeCCCCCEECCCCCee
Confidence            3788 99999999999997  355555

>d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Betacellulin-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.64  E-value=0.0036  Score=33.01  Aligned_cols=31  Identities=39%  Similarity=0.684  Sum_probs=24.1

Q ss_pred             CCCCCCCeeEe-cCCccEEeCCCCCeeCCCCCCcc
Q psy5614          57 GSCGYNAQCKV-INHTPICTCPEGYIGDPFSSCFP   90 (98)
Q Consensus        57 ~~C~~~a~C~~-~~g~~~C~C~~Gy~G~g~~~C~~   90 (98)
                      +.|.+++.|.. ....++|.|++||+|+   +|.-
T Consensus        14 ~yC~nGgcc~~~~~~~~~C~C~~gy~G~---rCe~   45 (50)
T d1ioxa_          14 HYCIKGRCRFVVAEQTPSCVCDEGYIGA---RCER   45 (50)
T ss_dssp             TSCTTCCEEEETTTTEEEECCCTTEETT---TTCE
T ss_pred             CCccCCeEEEeCCCCCcEeECCCCCeeC---CCcc
Confidence            57888888865 4458999999999995   4543

>d1moxc_ g.3.11.1 (C:) Transforming growth factor alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Transforming growth factor alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.41  E-value=0.0033  Score=33.03  Aligned_cols=33  Identities=24%  Similarity=0.532  Sum_probs=24.1

Q ss_pred             CCCCCCCeeEe-cCCccEEeCCCCCeeCCCCCCccCC
Q psy5614          57 GSCGYNAQCKV-INHTPICTCPEGYIGDPFSSCFPKP   92 (98)
Q Consensus        57 ~~C~~~a~C~~-~~g~~~C~C~~Gy~G~g~~~C~~~~   92 (98)
                      +.|.+++.|.. ....++|.|++||+|+   +|.-.+
T Consensus        13 ~yClnGgcc~~~~~~~~~C~C~~gy~G~---RCe~~~   46 (49)
T d1moxc_          13 QFCFHGTCRFLVQEDKPACVCHSGYVGA---RCEHAD   46 (49)
T ss_dssp             CSSTTEEEEEETTTTEEEEEECTTEEST---TSCEEC
T ss_pred             CEeeCCeEEecCCCCCcEeECCCCCEec---CCcccc
Confidence            57887777754 3458999999999994   565443

>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epiregulin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.37  E-value=0.0052  Score=31.81  Aligned_cols=26  Identities=35%  Similarity=0.741  Sum_probs=20.7

Q ss_pred             CCCCCCCeeEec--CCccEEeCCCCCeeC
Q psy5614          57 GSCGYNAQCKVI--NHTPICTCPEGYIGD   83 (98)
Q Consensus        57 ~~C~~~a~C~~~--~g~~~C~C~~Gy~G~   83 (98)
                      +.|.+ +.|...  ...++|.|++||+|+
T Consensus        12 ~yC~n-G~C~~~~~~~~~~C~C~~gY~G~   39 (46)
T d1k36a_          12 GYCLH-GQCIYLVDMSQNYCRCEVGYTGV   39 (46)
T ss_dssp             SSCSS-EEEEEETTTTEEEEEECTTCSST
T ss_pred             CcCcC-CEEEEeCCCCccEeECCCCceec
Confidence            57876 778653  458999999999996

>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.19  E-value=0.0059  Score=30.60  Aligned_cols=24  Identities=21%  Similarity=0.556  Sum_probs=18.5

Q ss_pred             cEEe-cCCCCeEEcCCCcE-eCCCCC
Q psy5614           7 IQCS-MQSNPSCSCLPNYI-GAPPNC   30 (98)
Q Consensus         7 a~C~-~~g~~~C~C~~Gy~-Gdg~~C   30 (98)
                      -.|+ +.++|+|.|++||+ -|+..|
T Consensus        14 h~C~n~~g~~~C~C~~Gy~L~d~~tC   39 (40)
T d3bpse1          14 HVCNDLKIGYECLCPDGFQLVAQRRC   39 (40)
T ss_dssp             SEEEECSSSEEEECCTTCCEETTTEE
T ss_pred             CEEEcCCCCEEEECCCCCEECCCCcC
Confidence            3788 89999999999995 344443

>d1ijqa2 g.3.11.1 (A:643-692) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.63  E-value=0.014  Score=30.52  Aligned_cols=21  Identities=33%  Similarity=0.743  Sum_probs=15.6

Q ss_pred             cCCccEEeCCCCCee--CCCCCCc
Q psy5614          68 INHTPICTCPEGYIG--DPFSSCF   89 (98)
Q Consensus        68 ~~g~~~C~C~~Gy~G--~g~~~C~   89 (98)
                      +.++|+|.|++||+-  |+. .|+
T Consensus        27 ~~~~y~C~C~~G~~L~~D~~-tCi   49 (50)
T d1ijqa2          27 HSPKFTCACPDGMLLARDMR-SCL   49 (50)
T ss_dssp             TCCSEEEECCTTCEECTTSS-CEE
T ss_pred             CCCCEEEeCCCCCEECCCCC-ccc
Confidence            457999999999983  444 564

>d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Betacellulin-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.23  E-value=0.011  Score=30.96  Aligned_cols=27  Identities=30%  Similarity=0.579  Sum_probs=21.4

Q ss_pred             ccCCcEEe--cCCCCeEEcCCCcEeCCCCCc
Q psy5614           3 WLMWIQCS--MQSNPSCSCLPNYIGAPPNCR   31 (98)
Q Consensus         3 ~~~~a~C~--~~g~~~C~C~~Gy~Gdg~~C~   31 (98)
                      |+..+.|.  ..+.++|.|++||+|  ..|+
T Consensus        16 C~nGgcc~~~~~~~~~C~C~~gy~G--~rCe   44 (50)
T d1ioxa_          16 CIKGRCRFVVAEQTPSCVCDEGYIG--ARCE   44 (50)
T ss_dssp             CTTCCEEEETTTTEEEECCCTTEET--TTTC
T ss_pred             ccCCeEEEeCCCCCcEeECCCCCee--CCCc
Confidence            66777776  667899999999999  4554

>d1moxc_ g.3.11.1 (C:) Transforming growth factor alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Transforming growth factor alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.13  E-value=0.013  Score=30.61  Aligned_cols=27  Identities=22%  Similarity=0.609  Sum_probs=20.5

Q ss_pred             ccCCcEEe--cCCCCeEEcCCCcEeCCCCCc
Q psy5614           3 WLMWIQCS--MQSNPSCSCLPNYIGAPPNCR   31 (98)
Q Consensus         3 ~~~~a~C~--~~g~~~C~C~~Gy~Gdg~~C~   31 (98)
                      |+..+.|.  ....++|.|++||+|  ..|+
T Consensus        15 ClnGgcc~~~~~~~~~C~C~~gy~G--~RCe   43 (49)
T d1moxc_          15 CFHGTCRFLVQEDKPACVCHSGYVG--ARCE   43 (49)
T ss_dssp             STTEEEEEETTTTEEEEEECTTEES--TTSC
T ss_pred             eeCCeEEecCCCCCcEeECCCCCEe--cCCc
Confidence            56666665  667899999999999  5553

>d1rfnb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.85  E-value=0.022  Score=30.55  Aligned_cols=30  Identities=37%  Similarity=0.741  Sum_probs=23.3

Q ss_pred             CeeEecCC-ccEEeCCCCCee--CCCCCCccCCC
Q psy5614          63 AQCKVINH-TPICTCPEGYIG--DPFSSCFPKPP   93 (98)
Q Consensus        63 a~C~~~~g-~~~C~C~~Gy~G--~g~~~C~~~~~   93 (98)
                      -.|+++.+ +|+|.|++||.-  |+. .|.++++
T Consensus        12 h~C~~~~~~~~~C~C~~Gy~L~~D~~-tC~~~~~   44 (57)
T d1rfnb_          12 QFCKNSADNKVVCSCTEGYRLAENQK-SCEPAVP   44 (57)
T ss_dssp             SEEEECTTSCEEEECCTTEEECTTSS-SEEECSS
T ss_pred             cEeeeCCCCCeEeECCCCCEECCCCC-ccccCCC
Confidence            47888864 899999999983  455 7988654

>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epiregulin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.44  E-value=0.017  Score=29.72  Aligned_cols=20  Identities=35%  Similarity=0.594  Sum_probs=16.8

Q ss_pred             CcEEe---cCCCCeEEcCCCcEe
Q psy5614           6 WIQCS---MQSNPSCSCLPNYIG   25 (98)
Q Consensus         6 ~a~C~---~~g~~~C~C~~Gy~G   25 (98)
                      |+.|.   ....++|.|.+||+|
T Consensus        16 nG~C~~~~~~~~~~C~C~~gY~G   38 (46)
T d1k36a_          16 HGQCIYLVDMSQNYCRCEVGYTG   38 (46)
T ss_dssp             SEEEEEETTTTEEEEEECTTCSS
T ss_pred             CCEEEEeCCCCccEeECCCCcee
Confidence            47886   456799999999999

>d2i9aa1 g.3.11.1 (A:10-49) Plasminogen activator (urokinase-type) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (urokinase-type)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.55  E-value=0.067  Score=26.28  Aligned_cols=28  Identities=21%  Similarity=0.485  Sum_probs=22.9

Q ss_pred             CccCCcEEe----cCCCCeEEcCCCcEeCCCCCc
Q psy5614           2 SWLMWIQCS----MQSNPSCSCLPNYIGAPPNCR   31 (98)
Q Consensus         2 ~~~~~a~C~----~~g~~~C~C~~Gy~Gdg~~C~   31 (98)
                      .|+..++|+    ..+-.+|.|+.+|.|  .+|+
T Consensus         3 ~ClNGG~Cvsyk~FS~I~rC~CPk~f~G--~HCE   34 (40)
T d2i9aa1           3 DCLNGGTCVSNKYFSNIHWCNCPKKFGG--QHCE   34 (40)
T ss_dssp             CCCTTCEEEECSSSTTCEEEECCTTEES--TTSC
T ss_pred             ccccCCEEEEEehhcCCEEecCCcccCc--eeEE
Confidence            478889998    556778999999999  6664

>d1oiga_ g.3.18.1 (A:) Dumpy {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: DPY module
family: DPY module
domain: Dumpy
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=92.40  E-value=0.058  Score=23.85  Aligned_cols=23  Identities=74%  Similarity=1.562  Sum_probs=18.3

Q ss_pred             ccCcCCCCCCCCceeeCCeecCC
Q psy5614          32 PECVMNSECASNLACINEKCRDP   54 (98)
Q Consensus        32 ~eC~~~~~C~~~~~C~~~~C~d~   54 (98)
                      +||.-+++|+.+..|++.+|.|+
T Consensus         2 pecvl~sdcpsn~acvnqkcrdp   24 (26)
T d1oiga_           2 PECVLNSDCPSNQACVNQKCRDP   24 (26)
T ss_dssp             CSCCSSTTSSTTCEECSSSEECC
T ss_pred             CceeEcCCCCccHhHhcccccCC
Confidence            46777888999989988888643

>d1xdtr_ g.3.11.1 (R:) Heparin-binding epidermal growth factor, HBEGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heparin-binding epidermal growth factor, HBEGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.10  E-value=0.024  Score=28.48  Aligned_cols=26  Identities=35%  Similarity=0.862  Sum_probs=20.1

Q ss_pred             CCCCCCCeeEec--CCccEEeCCCCCeeC
Q psy5614          57 GSCGYNAQCKVI--NHTPICTCPEGYIGD   83 (98)
Q Consensus        57 ~~C~~~a~C~~~--~g~~~C~C~~Gy~G~   83 (98)
                      +-|-+ ++|...  ...+.|.|..||+|.
T Consensus         8 ~yCih-G~C~~i~~l~~~~C~C~~gY~G~   35 (41)
T d1xdtr_           8 DFCIH-GECKYVKELRAPSCICHPGYHGE   35 (41)
T ss_dssp             TCCSS-EEECCBGGGTBCCEEECTTEEST
T ss_pred             CEeEC-cEEeecCcCCCceeECCCCCeec
Confidence            35664 889764  458899999999995

>d1xdtr_ g.3.11.1 (R:) Heparin-binding epidermal growth factor, HBEGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heparin-binding epidermal growth factor, HBEGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.98  E-value=0.049  Score=27.28  Aligned_cols=20  Identities=40%  Similarity=0.886  Sum_probs=17.5

Q ss_pred             CcEEe---cCCCCeEEcCCCcEe
Q psy5614           6 WIQCS---MQSNPSCSCLPNYIG   25 (98)
Q Consensus         6 ~a~C~---~~g~~~C~C~~Gy~G   25 (98)
                      |++|.   ....+.|.|..||+|
T Consensus        12 hG~C~~i~~l~~~~C~C~~gY~G   34 (41)
T d1xdtr_          12 HGECKYVKELRAPSCICHPGYHG   34 (41)
T ss_dssp             SEEECCBGGGTBCCEEECTTEES
T ss_pred             CcEEeecCcCCCceeECCCCCee
Confidence            58997   557889999999999

>d2bz6l1 g.3.11.1 (L:90-142) Coagulation factor VIIa {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Coagulation factor VIIa
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.84  E-value=0.055  Score=28.46  Aligned_cols=29  Identities=34%  Similarity=0.635  Sum_probs=22.0

Q ss_pred             CeeEecCC-ccEEeCCCCCee--CCCCCCccCC
Q psy5614          63 AQCKVINH-TPICTCPEGYIG--DPFSSCFPKP   92 (98)
Q Consensus        63 a~C~~~~g-~~~C~C~~Gy~G--~g~~~C~~~~   92 (98)
                      -.|+++.+ +|+|.|+.||+-  |+. .|.+..
T Consensus        11 h~C~~~~~~~~~C~C~~Gy~L~~D~~-tC~~~~   42 (53)
T d2bz6l1          11 QYCSDHTGTKRSCRCHEGYSLLADGV-SCTPTV   42 (53)
T ss_dssp             SEEEEETTTEEEEECCTTEEECTTSS-CEEECS
T ss_pred             CEeeeCCCCCEEeECCCCCEECCCCC-cccCCC
Confidence            36888865 689999999974  555 788753

>d2i9aa1 g.3.11.1 (A:10-49) Plasminogen activator (urokinase-type) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (urokinase-type)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.68  E-value=0.11  Score=25.41  Aligned_cols=27  Identities=22%  Similarity=0.617  Sum_probs=21.7

Q ss_pred             CCCCCCeeEec---CCccEEeCCCCCeeCC
Q psy5614          58 SCGYNAQCKVI---NHTPICTCPEGYIGDP   84 (98)
Q Consensus        58 ~C~~~a~C~~~---~g~~~C~C~~Gy~G~g   84 (98)
                      .|.++++|+..   .+..+|.|+.+|.|..
T Consensus         3 ~ClNGG~Cvsyk~FS~I~rC~CPk~f~G~H   32 (40)
T d2i9aa1           3 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQH   32 (40)
T ss_dssp             CCCTTCEEEECSSSTTCEEEECCTTEESTT
T ss_pred             ccccCCEEEEEehhcCCEEecCCcccCcee
Confidence            47888999873   4577899999999954

>d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.13  E-value=0.045  Score=28.54  Aligned_cols=25  Identities=32%  Similarity=0.708  Sum_probs=20.1

Q ss_pred             EEe-cCCCCeEEcCCCcE--eCCCCCcc
Q psy5614           8 QCS-MQSNPSCSCLPNYI--GAPPNCRP   32 (98)
Q Consensus         8 ~C~-~~g~~~C~C~~Gy~--Gdg~~C~~   32 (98)
                      .|+ +.++|+|.|++||+  .|+..|.+
T Consensus        13 ~C~n~~g~~~C~C~~Gy~L~~D~~tC~~   40 (51)
T d2p3ua1          13 FCHEEQNSVVCSCARGYTLADNGKACIP   40 (51)
T ss_dssp             EEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred             EeecCCCCeEeEcCCCCEECCCCCcccc
Confidence            678 88999999999997  35667753

>d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.44  E-value=0.074  Score=27.54  Aligned_cols=24  Identities=29%  Similarity=0.571  Sum_probs=19.6

Q ss_pred             EEe-cCCCCeEEcCCCcEe--CCCCCc
Q psy5614           8 QCS-MQSNPSCSCLPNYIG--APPNCR   31 (98)
Q Consensus         8 ~C~-~~g~~~C~C~~Gy~G--dg~~C~   31 (98)
                      .|+ +.++|+|.|++||+=  |+..|.
T Consensus        12 ~C~~~~g~~~C~C~~Gy~L~~D~~tC~   38 (50)
T d1autl2          12 YCLEEVGWRRCSCAPGYKLGDDLLQCH   38 (50)
T ss_dssp             EEEECSSSEEEECCTTEEECTTSSCEE
T ss_pred             EeecCCCCeEEECCCCCEECCCCCccc
Confidence            688 889999999999964  566765

>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.18  E-value=0.067  Score=26.08  Aligned_cols=20  Identities=15%  Similarity=0.381  Sum_probs=17.7

Q ss_pred             CcEEe-cCCCCeEEcCCCcEe
Q psy5614           6 WIQCS-MQSNPSCSCLPNYIG   25 (98)
Q Consensus         6 ~a~C~-~~g~~~C~C~~Gy~G   25 (98)
                      |++|. ..|.|.|.|..||.-
T Consensus        12 nGTCtNviGgFec~C~~GFep   32 (39)
T d1emoa2          12 NGTCKNVIGGFECTCEEGFEP   32 (39)
T ss_dssp             SSCEEECSSSEEECCSSSSCC
T ss_pred             CceeeecccceEEeecCCcCC
Confidence            67899 999999999999953

>d1kloa1 g.3.11.2 (A:11-65) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Laminin-type module
domain: Laminin gamma1 chain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=88.93  E-value=0.17  Score=26.40  Aligned_cols=33  Identities=24%  Similarity=0.722  Sum_probs=22.1

Q ss_pred             CCCCCCeeEec--CCccEE-eCCCCCeeCCCCCCcc
Q psy5614          58 SCGYNAQCKVI--NHTPIC-TCPEGYIGDPFSSCFP   90 (98)
Q Consensus        58 ~C~~~a~C~~~--~g~~~C-~C~~Gy~G~g~~~C~~   90 (98)
                      +|..++.|...  .+..+| .|++||+|+--..|.+
T Consensus         2 pC~~~~~c~~~~~~~~~vC~~C~~~~~G~~Ce~C~~   37 (55)
T d1kloa1           2 PCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCELCDD   37 (55)
T ss_dssp             CSCTTCCEEECSSSCCEEECSCCTTEESTTSCEECT
T ss_pred             cCcCCCccceeCCCCCEEcCCCCCCCccCcccccCC
Confidence            46667777653  346778 5999999976555543

>d1dx5i1 g.3.11.1 (I:345-387) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.70  E-value=0.21  Score=24.88  Aligned_cols=28  Identities=36%  Similarity=1.039  Sum_probs=19.4

Q ss_pred             CCCC-CCCCCCCeeEecCC-ccEEeCCCCCee
Q psy5614          53 DPCP-GSCGYNAQCKVINH-TPICTCPEGYIG   82 (98)
Q Consensus        53 d~C~-~~C~~~a~C~~~~g-~~~C~C~~Gy~G   82 (98)
                      |+|. ..|.  -+|...+. .|+|.|..||+-
T Consensus         5 DPCf~~~CE--~qCqP~~~~~Y~CiCaeGFaP   34 (43)
T d1dx5i1           5 DPCFRANCE--YQCQPLDQTSYLCVCAEGFAP   34 (43)
T ss_dssp             CGGGGCCCS--SEEEECSSSCEEEECCTTEEE
T ss_pred             ccccCCCcc--eeeeeCCCCcceEEecccccc
Confidence            4443 3553  36777654 999999999974