Psyllid ID: psy5722

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80------
Protein Sequence
MSNNAPADREIAAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLSLGIGTASESSSEHTKLIGDVITGQNDKEKRMTVHS
Secondary Structure (PSIPRED)
ccccccccccccccccEEEEEEEEcccHHHHHcccEEEEEccccccccEEEEcccccccccHHHHHHHHHHHcccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccHcccccccEEEEEEEEccccHHHHHHcccEccEEcccccccEEEEEEcccccccccccEEEccEEccccccccEcEEcc
Coil and Loop (DISEMBL)
msnnapadreiaaeDSIRVVcrfrplnhseekagSKFIvkfpsggeenglslgigtasessseHTKLIGDvitgqndkekrmtvhs
Flexible Loop (DISEMBL)
msnnapadreiaaedsirvVCRFrplnhseekagskFIVKFPSGGEENGLSLGIGTASESSSEHTKLigdvitgqndkekrmtvhs
Low Complexity Region (SEG)
MSNNAPADREIAAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLSLGIGTASESSSEHTKLIGDVITGQNDKEKRMTVHS
Disordered region (IsUnstruct)
****************IRVVCRFRPL**********FIV***********************************************
Disordered Region (DISOPRED)
*************EDSIRVVCRFRPLN********KFIVKFPSGGEENGL******************GDVITGQNDK********
Disordered Region (DISEMBL)
*********EIAAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLSLGIG*********TKLIGDVITGQNDKEKRMTVHS
Disordered Region (DISPRO)
**********IAAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLSLGIGTASESSSEHTKLIGDVITGQ***********
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSNNAPADREIAAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLSLGIGTASESSSEHTKLIGDVITGQNDKEKRMTVHS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	86	2.2.26 [Sep-21-2011]
P17210	975	Kinesin heavy chain OS=Dr	yes	N/A	0.546	0.048	0.744	7e-15
P21613	967	Kinesin heavy chain OS=Do	N/A	N/A	0.395	0.035	0.617	7e-08
P34540	815	Kinesin heavy chain OS=Ca	yes	N/A	0.441	0.046	0.512	7e-05
P33176	963	Kinesin-1 heavy chain OS=	yes	N/A	0.337	0.030	0.620	0.0004
Q2PQA9	963	Kinesin-1 heavy chain OS=	yes	N/A	0.720	0.064	0.368	0.0004
Q61768	963	Kinesin-1 heavy chain OS=	yes	N/A	0.720	0.064	0.368	0.0005
P28738	956	Kinesin heavy chain isofo	no	N/A	0.383	0.034	0.628	0.0005
O60282	957	Kinesin heavy chain isofo	no	N/A	0.337	0.030	0.655	0.0007
P56536	239	Kinesin heavy chain isofo	no	N/A	0.383	0.138	0.628	0.0009

>sp|P17210|KINH_DROME Kinesin heavy chain OS=Drosophila melanogaster GN=Khc PE=1 SV=2

 Score = 79.3 bits (194), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 35/47 (74%), Positives = 41/47 (87%)

Query: 7  ADREIAAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLSLG 53
          A+REI AEDSI+VVCRFRPLN SEEKAGSKF+VKFP+  EEN +S+ 
Sbjct: 3  AEREIPAEDSIKVVCRFRPLNDSEEKAGSKFVVKFPNNVEENCISIA 49

Kinesin is a microtubule-associated force-producing protein that may play a role in organelle transport. Milt and Miro form an essential protein complex that links Khc to mitochondria for light chain-independent, anterograde transport of mitochondria.
Drosophila melanogaster (taxid: 7227)

>sp|P21613|KINH_DORPE Kinesin heavy chain OS=Doryteuthis pealeii PE=2 SV=1

 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 21/34 (61%), Positives = 31/34 (91%)

Query: 10 EIAAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPS 43
          ++A+E +I+V+CR RPLN +EE+AGSKFI+KFP+
Sbjct: 2  DVASECNIKVICRVRPLNEAEERAGSKFILKFPT 35

Kinesin is a microtubule-associated force-producing protein that may play a role in organelle transport.

Loligo pealeii (taxid: 1051067)

>sp|P34540|KINH_CAEEL Kinesin heavy chain OS=Caenorhabditis elegans GN=unc-116 PE=2 SV=2

 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 21/41 (51%), Positives = 28/41 (68%), Gaps = 3/41 (7%)

Query: 13 AEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLSLG 53
          AE  ++V CR RPLN +EEK   +F+ KFPS   E+ +SLG
Sbjct: 8  AECGVQVFCRIRPLNKTEEKNADRFLPKFPS---EDSISLG 45

Kinesin is a microtubule-associated force-producing protein that may play a role in organelle transport.

Caenorhabditis elegans (taxid: 6239)

>sp|P33176|KINH_HUMAN Kinesin-1 heavy chain OS=Homo sapiens GN=KIF5B PE=1 SV=1

 Score = 43.5 bits (101), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 18/29 (62%), Positives = 22/29 (75%)

Query: 13 AEDSIRVVCRFRPLNHSEEKAGSKFIVKF 41
          AE +I+V+CRFRPLN SE   G K+I KF
Sbjct: 5  AECNIKVMCRFRPLNESEVNRGDKYIAKF 33

Microtubule-dependent motor required for normal distribution of mitochondria and lysosomes.

Homo sapiens (taxid: 9606)

>sp|Q2PQA9|KINH_RAT Kinesin-1 heavy chain OS=Rattus norvegicus GN=Kif5b PE=1 SV=1

 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 14/76 (18%)

Query: 13 AEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLSLGIGTA------SESSSEHT- 65
          AE +I+V+CRFRPLN SE   G K++ KF   GE+  +      A      S +S E   
Sbjct: 5  AECNIKVMCRFRPLNESEVNRGDKYVAKFQ--GEDTVMIASKPYAFDRVFQSSTSQEQVY 62

Query: 66 -----KLIGDVITGQN 76
               K++ DV+ G N
Sbjct: 63 NDCAKKIVKDVLEGYN 78

Microtubule-dependent motor required for normal distribution of mitochondria and lysosomes.

Rattus norvegicus (taxid: 10116)

>sp|Q61768|KINH_MOUSE Kinesin-1 heavy chain OS=Mus musculus GN=Kif5b PE=1 SV=3

 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 14/76 (18%)

Query: 13 AEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLSLGIGTA------SESSSEHT- 65
          AE +I+V+CRFRPLN SE   G K++ KF   GE+  +      A      S +S E   
Sbjct: 5  AECNIKVMCRFRPLNESEVNRGDKYVAKFQ--GEDTVMIASKPYAFDRVFQSSTSQEQVY 62

Query: 66 -----KLIGDVITGQN 76
               K++ DV+ G N
Sbjct: 63 NDCAKKIVKDVLEGYN 78

Microtubule-dependent motor required for normal distribution of mitochondria and lysosomes. May be involved in the mechanisms of growth arrest induced by exposure to DNA-damaging drugs or by cellular senescence.

Mus musculus (taxid: 10090)

>sp|P28738|KIF5C_MOUSE Kinesin heavy chain isoform 5C OS=Mus musculus GN=Kif5c PE=1 SV=3

 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/35 (62%), Positives = 25/35 (71%), Gaps = 2/35 (5%)

Query: 13 AEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEE 47
          AE SI+V+CRFRPLN +E   G KFI KF   GEE
Sbjct: 5  AECSIKVMCRFRPLNEAEILRGDKFIPKFK--GEE 37

Kinesin is a microtubule-associated force-producing protein that may play a role in organelle transport.

Mus musculus (taxid: 10090)

>sp|O60282|KIF5C_HUMAN Kinesin heavy chain isoform 5C OS=Homo sapiens GN=KIF5C PE=1 SV=1

 Score = 42.7 bits (99), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 19/29 (65%), Positives = 22/29 (75%)

Query: 13 AEDSIRVVCRFRPLNHSEEKAGSKFIVKF 41
          AE SI+V+CRFRPLN +E   G KFI KF
Sbjct: 5  AECSIKVMCRFRPLNEAEILRGDKFIPKF 33

Kinesin is a microtubule-associated force-producing protein that may play a role in organelle transport.

Homo sapiens (taxid: 9606)

>sp|P56536|KIF5C_RAT Kinesin heavy chain isoform 5C (Fragment) OS=Rattus norvegicus GN=Kif5c PE=1 SV=2

 Score = 42.4 bits (98), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 22/35 (62%), Positives = 25/35 (71%), Gaps = 2/35 (5%)

Query: 13 AEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEE 47
          AE SI+V+CRFRPLN +E   G KFI KF   GEE
Sbjct: 5  AECSIKVMCRFRPLNEAEILRGDKFIPKF--KGEE 37

Kinesin is a microtubule-associated force-producing protein that may play a role in organelle transport.

Rattus norvegicus (taxid: 10116)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	86
340721138	971	PREDICTED: kinesin heavy chain-like [Bom	0.616	0.054	0.773	4e-17
332017463	969	Kinesin heavy chain [Acromyrmex echinati	0.616	0.054	0.773	4e-17
66520179	988	PREDICTED: kinesin heavy chain isoform 1	0.616	0.053	0.773	5e-17
380029607	989	PREDICTED: kinesin heavy chain-like [Api	0.616	0.053	0.773	5e-17
383853868	970	PREDICTED: kinesin heavy chain-like [Meg	0.616	0.054	0.773	7e-17
307186188	969	Kinesin heavy chain [Camponotus floridan	0.616	0.054	0.754	9e-17
345485732	990	PREDICTED: kinesin heavy chain [Nasonia	0.616	0.053	0.754	2e-16
307196040	1002	Kinesin heavy chain [Harpegnathos saltat	0.616	0.052	0.754	5e-16
357609245	965	kinesin heavy chain [Danaus plexippus]	0.546	0.048	0.851	5e-16
309384283	964	kinesin heavy chain [Bombyx mori] gi|309	0.546	0.048	0.851	6e-16

>gi|340721138|ref|XP_003398982.1| PREDICTED: kinesin heavy chain-like [Bombus terrestris] gi|350399421|ref|XP_003485517.1| PREDICTED: kinesin heavy chain-like [Bombus impatiens]

 Score = 92.0 bits (227), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 41/53 (77%), Positives = 47/53 (88%)

Query: 1  MSNNAPADREIAAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLSLG 53
          M+   P +REIAAEDSI+VVCRFRPLN SEEKAGSKFIVKFPSGGE+N +S+G
Sbjct: 1  MAMETPREREIAAEDSIKVVCRFRPLNDSEEKAGSKFIVKFPSGGEDNCISIG 53

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332017463|gb|EGI58186.1| Kinesin heavy chain [Acromyrmex echinatior]

 Score = 92.0 bits (227), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 41/53 (77%), Positives = 47/53 (88%)

Query: 1  MSNNAPADREIAAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLSLG 53
          M+   P +REIAAEDSI+VVCRFRPLN SEEKAGSKFIVKFPSGG+EN +S+G
Sbjct: 1  MAMETPREREIAAEDSIKVVCRFRPLNDSEEKAGSKFIVKFPSGGDENCISIG 53

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|66520179|ref|XP_395236.2| PREDICTED: kinesin heavy chain isoform 1 [Apis mellifera]

 Score = 91.7 bits (226), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 41/53 (77%), Positives = 47/53 (88%)

Query: 1  MSNNAPADREIAAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLSLG 53
          M+   P +REIAAEDSI+VVCRFRPLN SEEKAGSKFIVKFPSGGE+N +S+G
Sbjct: 1  MAMETPREREIAAEDSIKVVCRFRPLNDSEEKAGSKFIVKFPSGGEDNCISIG 53

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380029607|ref|XP_003698460.1| PREDICTED: kinesin heavy chain-like [Apis florea]

 Score = 91.7 bits (226), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 41/53 (77%), Positives = 47/53 (88%)

Query: 1  MSNNAPADREIAAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLSLG 53
          M+   P +REIAAEDSI+VVCRFRPLN SEEKAGSKFIVKFPSGGE+N +S+G
Sbjct: 1  MAMETPREREIAAEDSIKVVCRFRPLNDSEEKAGSKFIVKFPSGGEDNCISIG 53

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383853868|ref|XP_003702444.1| PREDICTED: kinesin heavy chain-like [Megachile rotundata]

 Score = 91.3 bits (225), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 41/53 (77%), Positives = 46/53 (86%)

Query: 1  MSNNAPADREIAAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLSLG 53
          M+   P +REI AEDSI+VVCRFRPLN SEEKAGSKFIVKFPSGGEEN +S+G
Sbjct: 1  MAMETPREREIPAEDSIKVVCRFRPLNDSEEKAGSKFIVKFPSGGEENCISIG 53

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307186188|gb|EFN71894.1| Kinesin heavy chain [Camponotus floridanus]

 Score = 90.9 bits (224), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 40/53 (75%), Positives = 47/53 (88%)

Query: 1  MSNNAPADREIAAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLSLG 53
          M+   P +REIAAEDSI+VVCRFRPLN SEEKAGSKFIVKFP+GG+EN +S+G
Sbjct: 1  MAMETPREREIAAEDSIKVVCRFRPLNDSEEKAGSKFIVKFPAGGDENCISIG 53

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345485732|ref|XP_001606707.2| PREDICTED: kinesin heavy chain [Nasonia vitripennis]

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 40/53 (75%), Positives = 47/53 (88%)

Query: 1  MSNNAPADREIAAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLSLG 53
          M++ A   REIAAEDSI+VVCRFRPLN SEEKAGSKF+VKFPSGG+EN +S+G
Sbjct: 1  MASEAAPQREIAAEDSIKVVCRFRPLNDSEEKAGSKFVVKFPSGGDENCISIG 53

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307196040|gb|EFN77765.1| Kinesin heavy chain [Harpegnathos saltator]

 Score = 88.6 bits (218), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 40/53 (75%), Positives = 46/53 (86%)

Query: 1  MSNNAPADREIAAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLSLG 53
          M+   P +REIAAEDSI+VVCRFRPLN SEEKAGSKFIVKFPSG E+N +S+G
Sbjct: 1  MAMETPREREIAAEDSIKVVCRFRPLNDSEEKAGSKFIVKFPSGVEDNCISIG 53

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357609245|gb|EHJ66362.1| kinesin heavy chain [Danaus plexippus]

 Score = 88.2 bits (217), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 40/47 (85%), Positives = 44/47 (93%)

Query: 7  ADREIAAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLSLG 53
          ADREIAAEDSIRVVCRFRPLN SEEKAGSKFIVKFPSG ++N +S+G
Sbjct: 3  ADREIAAEDSIRVVCRFRPLNDSEEKAGSKFIVKFPSGPDDNCISIG 49

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|309384283|ref|NP_001116822.2| kinesin heavy chain [Bombyx mori] gi|309378082|gb|ABK92268.2| kinesin-like protein 1 [Bombyx mori]

 Score = 88.2 bits (217), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 40/47 (85%), Positives = 44/47 (93%)

Query: 7  ADREIAAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLSLG 53
          ADREIAAEDSIRVVCRFRPLN SEEKAGSKFIVKFPSG ++N +S+G
Sbjct: 3  ADREIAAEDSIRVVCRFRPLNDSEEKAGSKFIVKFPSGPDDNCISIG 49

Source: Bombyx mori

Species: Bombyx mori

Genus: Bombyx

Family: Bombycidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	86
FB|FBgn0001308	975	Khc "Kinesin heavy chain" [Dro	0.534	0.047	0.760	1.1e-12
ZFIN|ZDB-GENE-081105-14	985	kif5c "kinesin family member 5	0.465	0.040	0.5	5.2e-05
RGD|1308539	239	Kif5c "kinesin family member 5	0.465	0.167	0.558	9.7e-05
UNIPROTKB|P56536	239	Kif5c "Kinesin heavy chain iso	0.465	0.167	0.558	9.7e-05
UNIPROTKB|F6RAG5	956	KIF5C "Uncharacterized protein	0.453	0.040	0.547	0.00012
WB|WBGene00006840	815	unc-116 [Caenorhabditis elegan	0.488	0.051	0.488	0.00023
ZFIN|ZDB-GENE-070912-141	1033	kif5aa "kinesin family member	0.372	0.030	0.531	0.00039
UNIPROTKB|E2RDZ9	957	KIF5C "Uncharacterized protein	0.465	0.041	0.558	0.00075
UNIPROTKB|F1N945	995	KIF5C "Uncharacterized protein	0.465	0.040	0.558	0.00079

FB|FBgn0001308 Khc "Kinesin heavy chain" [Drosophila melanogaster (taxid:7227)]

 Score = 181 (68.8 bits), Expect = 1.1e-12, P = 1.1e-12
 Identities = 35/46 (76%), Positives = 41/46 (89%)

Query:     7 ADREIAAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLSL 52
             A+REI AEDSI+VVCRFRPLN SEEKAGSKF+VKFP+  EEN +S+
Sbjct:     3 AEREIPAEDSIKVVCRFRPLNDSEEKAGSKFVVKFPNNVEENCISI 48

GO:0005737 "cytoplasm" evidence=IDA

GO:0003774 "motor activity" evidence=NAS

GO:0008017 "microtubule binding" evidence=ISS;IDA

GO:0005871 "kinesin complex" evidence=ISS;NAS;IDA

GO:0007018 "microtubule-based movement" evidence=ISS;IDA;NAS

GO:0003777 "microtubule motor activity" evidence=ISS;IDA;NAS

GO:0035371 "microtubule plus end" evidence=IDA

GO:0007269 "neurotransmitter secretion" evidence=NAS

GO:0019227 "neuronal action potential propagation" evidence=NAS

GO:0007317 "regulation of pole plasm oskar mRNA localization" evidence=IMP;TAS

GO:0008574 "plus-end-directed microtubule motor activity" evidence=TAS

GO:0007315 "pole plasm assembly" evidence=IMP

GO:0007310 "oocyte dorsal/ventral axis specification" evidence=IMP

GO:0045451 "pole plasm oskar mRNA localization" evidence=NAS

GO:0007303 "cytoplasmic transport, nurse cell to oocyte" evidence=TAS

GO:0008088 "axon cargo transport" evidence=IMP

GO:0005524 "ATP binding" evidence=IEA

GO:0001754 "eye photoreceptor cell differentiation" evidence=IGI

GO:0016482 "cytoplasmic transport" evidence=IMP

GO:0005739 "mitochondrion" evidence=IDA

GO:0047497 "mitochondrion transport along microtubule" evidence=IMP

GO:0008103 "oocyte microtubule cytoskeleton polarization" evidence=IMP

GO:0048311 "mitochondrion distribution" evidence=IMP

GO:0005875 "microtubule associated complex" evidence=IDA

GO:0007409 "axonogenesis" evidence=IMP

GO:0048813 "dendrite morphogenesis" evidence=IMP

GO:0007411 "axon guidance" evidence=IMP

GO:0010970 "microtubule-based transport" evidence=IDA

GO:0006886 "intracellular protein transport" evidence=IMP

GO:0030011 "maintenance of cell polarity" evidence=IMP

GO:0048812 "neuron projection morphogenesis" evidence=IMP

GO:0048741 "skeletal muscle fiber development" evidence=IMP

GO:0040023 "establishment of nucleus localization" evidence=IMP

GO:0048312 "intracellular distribution of mitochondria" evidence=IMP

ZFIN|ZDB-GENE-081105-14 kif5c "kinesin family member 5C" [Danio rerio (taxid:7955)]

 Score = 95 (38.5 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
 Identities = 21/42 (50%), Positives = 27/42 (64%)

Query:    12 AAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLSLG 53
             AAE  ++V+CRFRPLN SE   G K+I KF   GE+  +  G
Sbjct:     4 AAECCVKVMCRFRPLNESEINRGDKYIPKFK--GEDTVVIAG 43

GO:0005524 "ATP binding" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0003777 "microtubule motor activity" evidence=IEA

GO:0005875 "microtubule associated complex" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

RGD|1308539 Kif5c "kinesin family member 5C" [Rattus norvegicus (taxid:10116)]

 Score = 98 (39.6 bits), Expect = 9.7e-05, P = 9.7e-05
 Identities = 24/43 (55%), Positives = 29/43 (67%)

Query:    13 AEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLSLGIG 55
             AE SI+V+CRFRPLN +E   G KFI KF   GEE  + +G G
Sbjct:     5 AECSIKVMCRFRPLNEAEILRGDKFIPKFK--GEET-VVIGQG 44

GO:0003777 "microtubule motor activity" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA;ISO

GO:0005874 "microtubule" evidence=IEA

GO:0005875 "microtubule associated complex" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0008045 "motor neuron axon guidance" evidence=ISO

GO:0034190 "apolipoprotein receptor binding" evidence=IPI

GO:0035253 "ciliary rootlet" evidence=ISO

GO:0043005 "neuron projection" evidence=ISO

GO:0051028 "mRNA transport" evidence=ISS

UNIPROTKB|P56536 Kif5c "Kinesin heavy chain isoform 5C" [Rattus norvegicus (taxid:10116)]

 Score = 98 (39.6 bits), Expect = 9.7e-05, P = 9.7e-05
 Identities = 24/43 (55%), Positives = 29/43 (67%)

Query:    13 AEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLSLGIG 55
             AE SI+V+CRFRPLN +E   G KFI KF   GEE  + +G G
Sbjct:     5 AECSIKVMCRFRPLNEAEILRGDKFIPKFK--GEET-VVIGQG 44

GO:0003777 "microtubule motor activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005874 "microtubule" evidence=IEA

GO:0005875 "microtubule associated complex" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

UNIPROTKB|F6RAG5 KIF5C "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 98 (39.6 bits), Expect = 0.00012, Sum P(2) = 0.00012
 Identities = 23/42 (54%), Positives = 29/42 (69%)

Query:    13 AEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLSLGI 54
             AE SI+V+CRFRPLN +E   G KFI KF   GEE  + +G+
Sbjct:     5 AECSIKVMCRFRPLNEAEILRGDKFIPKFK--GEET-VVIGV 43

GO:0043005 "neuron projection" evidence=IEA

GO:0035253 "ciliary rootlet" evidence=IEA

GO:0008045 "motor neuron axon guidance" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005874 "microtubule" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0005875 "microtubule associated complex" evidence=IEA

GO:0003777 "microtubule motor activity" evidence=IEA

WB|WBGene00006840 unc-116 [Caenorhabditis elegans (taxid:6239)]

 Score = 102 (41.0 bits), Expect = 0.00023, P = 0.00023
 Identities = 22/45 (48%), Positives = 29/45 (64%)

Query:     9 REIAAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLSLG 53
             R   AE  ++V CR RPLN +EEK   +F+ KFPS   E+ +SLG
Sbjct:     4 RTDGAECGVQVFCRIRPLNKTEEKNADRFLPKFPS---EDSISLG 45

GO:0003777 "microtubule motor activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005875 "microtubule associated complex" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0006808 "regulation of nitrogen utilization" evidence=IEA

GO:0030234 "enzyme regulator activity" evidence=IEA

GO:0010171 "body morphogenesis" evidence=IMP

GO:0040011 "locomotion" evidence=IMP

GO:0040010 "positive regulation of growth rate" evidence=IMP

GO:0002009 "morphogenesis of an epithelium" evidence=IMP

GO:0007413 "axonal fasciculation" evidence=IMP

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0016358 "dendrite development" evidence=IMP

GO:0030163 "protein catabolic process" evidence=IMP

GO:0016938 "kinesin I complex" evidence=IPI

GO:0048489 "synaptic vesicle transport" evidence=IMP

GO:0005737 "cytoplasm" evidence=IDA

GO:0005635 "nuclear envelope" evidence=IDA

GO:0051295 "establishment of meiotic spindle localization" evidence=IMP

GO:0051296 "establishment of meiotic spindle orientation" evidence=IMP

GO:0040038 "polar body extrusion after meiotic divisions" evidence=IMP

GO:0033206 "cytokinesis after meiosis" evidence=IMP

GO:0008574 "plus-end-directed microtubule motor activity" evidence=IDA

GO:0010940 "positive regulation of necrotic cell death" evidence=IGI

ZFIN|ZDB-GENE-070912-141 kif5aa "kinesin family member 5A, a" [Danio rerio (taxid:7955)]

 Score = 87 (35.7 bits), Expect = 0.00039, Sum P(2) = 0.00039
 Identities = 17/32 (53%), Positives = 23/32 (71%)

Query:    10 EIAAEDSIRVVCRFRPLNHSEEKAGSKFIVKF 41
             + AAE +I+V+CRFRPLN +E   G KF+  F
Sbjct:     3 DAAAECNIKVLCRFRPLNQAEILRGDKFLPTF 34

GO:0003777 "microtubule motor activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0005875 "microtubule associated complex" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005874 "microtubule" evidence=IEA

UNIPROTKB|E2RDZ9 KIF5C "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 98 (39.6 bits), Expect = 0.00075, P = 0.00075
 Identities = 24/43 (55%), Positives = 29/43 (67%)

Query:    13 AEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLSLGIG 55
             AE SI+V+CRFRPLN +E   G KFI KF   GEE  + +G G
Sbjct:     5 AECSIKVMCRFRPLNEAEILRGDKFIPKFK--GEET-VVIGQG 44

GO:0043005 "neuron projection" evidence=IEA

GO:0035253 "ciliary rootlet" evidence=IEA

GO:0008045 "motor neuron axon guidance" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005874 "microtubule" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0005875 "microtubule associated complex" evidence=IEA

GO:0003777 "microtubule motor activity" evidence=IEA

UNIPROTKB|F1N945 KIF5C "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 98 (39.6 bits), Expect = 0.00079, P = 0.00079
 Identities = 24/43 (55%), Positives = 29/43 (67%)

Query:    13 AEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLSLGIG 55
             AE SI+V+CRFRPLN +E   G KFI KF   GEE  + +G G
Sbjct:    43 AECSIKVMCRFRPLNEAEILRGDKFIPKFK--GEET-VVIGQG 82


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.309   0.127   0.348    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       86        86   0.00091  102 3  11 23  0.39    30
                                                     29  0.47    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  9
  No. of states in DFA:  492 (52 KB)
  Total size of DFA:  91 KB (2068 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  9.59u 0.09s 9.68t   Elapsed:  00:00:02
  Total cpu time:  9.59u 0.09s 9.68t   Elapsed:  00:00:02
  Start:  Thu Aug 15 16:41:38 2013   End:  Thu Aug 15 16:41:40 2013

GO:0003777 "microtubule motor activity" evidence=IEA

GO:0005875 "microtubule associated complex" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005874 "microtubule" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0008045 "motor neuron axon guidance" evidence=IEA

GO:0035253 "ciliary rootlet" evidence=IEA

GO:0043005 "neuron projection" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P34540	KINH_CAEEL	No assigned EC number	0.5121	0.4418	0.0466	yes	N/A
P17210	KINH_DROME	No assigned EC number	0.7446	0.5465	0.0482	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	86
cd01369	325	cd01369, KISc_KHC_KIF5, Kinesin motor domain, kine	2e-09
smart00129	335	smart00129, KISc, Kinesin motor, catalytic domain	1e-04

>gnl|CDD|238665 cd01369, KISc_KHC_KIF5, Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup

 Score = 51.9 bits (125), Expect = 2e-09
 Identities = 21/31 (67%), Positives = 23/31 (74%)

Query: 14 EDSIRVVCRFRPLNHSEEKAGSKFIVKFPSG 44
          E +I+VVCRFRPLN  EE  GSK IVKFP  
Sbjct: 1  ECNIKVVCRFRPLNEKEELRGSKSIVKFPGE 31

Members of this group have been associated with organelle transport. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward. Length = 325

>gnl|CDD|214526 smart00129, KISc, Kinesin motor, catalytic domain

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 14/29 (48%), Positives = 17/29 (58%)

Query: 16 SIRVVCRFRPLNHSEEKAGSKFIVKFPSG 44
          +IRVV R RPLN  E+   S  +V FP  
Sbjct: 1  NIRVVVRVRPLNKREKSRKSPSVVPFPDK 29

ATPase. Microtubule-dependent molecular motors that play important roles in intracellular transport of organelles and in cell division. Length = 335

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	86
KOG0240|consensus	607		99.77
KOG0243|consensus	1041		99.76
KOG0239|consensus	670		99.68
cd01370	338	KISc_KIP3_like Kinesin motor domain, KIP3-like sub	99.64
cd01373	337	KISc_KLP2_like Kinesin motor domain, KLP2-like sub	99.63
KOG4280|consensus	574		99.62
cd01371	333	KISc_KIF3 Kinesin motor domain, kinesins II or KIF	99.6
cd01367	322	KISc_KIF2_like Kinesin motor domain, KIF2-like gro	99.6
cd01369	325	KISc_KHC_KIF5 Kinesin motor domain, kinesin heavy	99.59
cd01365	356	KISc_KIF1A_KIF1B Kinesin motor domain, KIF1_like p	99.58
cd01368	345	KISc_KIF23_like Kinesin motor domain, KIF23-like s	99.58
cd01364	352	KISc_BimC_Eg5 Kinesin motor domain, BimC/Eg5 spind	99.57
cd01372	341	KISc_KIF4 Kinesin motor domain, KIF4-like subfamil	99.56
KOG0245|consensus	1221		99.56
PLN03188	1320	kinesin-12 family protein; Provisional	99.53
cd01374	321	KISc_CENP_E Kinesin motor domain, CENP-E/KIP2-like	99.53
KOG0242|consensus	675		99.48
cd01376	319	KISc_KID_like Kinesin motor domain, KIF22/Kid-like	99.47
cd01366	329	KISc_C_terminal Kinesin motor domain, KIFC2/KIFC3/	99.45
KOG0241|consensus	1714		99.42
smart00129	335	KISc Kinesin motor, catalytic domain. ATPase. Micr	99.37
cd00106	328	KISc Kinesin motor domain. This catalytic (head) d	99.35
cd01375	334	KISc_KIF9_like Kinesin motor domain, KIF9-like sub	99.31
PF00225	335	Kinesin: Kinesin motor domain; InterPro: IPR001752	99.16
KOG0246|consensus	676		98.92
KOG0247|consensus	809		98.56
COG5059	568	KIP1 Kinesin-like protein [Cytoskeleton]	98.52
KOG0244|consensus	913		98.48
cd01363	186	Motor_domain Myosin and Kinesin motor domain. Thes	98.42
PF12444	84	Sox_N: Sox developmental protein N terminal ; Inte	80.61

>KOG0240|consensus

Probab=99.77  E-value=3.3e-19  Score=141.63  Aligned_cols=71  Identities=41%  Similarity=0.567  Sum_probs=59.5

Q ss_pred             cccCCCeeEEEeecCCCchhhhcCCceeEecCCCCCcceE---------------EeCCCCCccceee--hhhHHHHHHc
Q psy5722          11 IAAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGL---------------SLGIGTASESSSE--HTKLIGDVIT   73 (86)
Q Consensus        11 ~~~~~nIrV~vRvRPln~~E~~~g~~~~v~~~~~~~~~~v---------------~~~~~~tQ~~Vye--~~plV~~vl~   73 (86)
                      +...|+|+|+|||||+|..|...++..+..+.+.  +..+               +|.+.++|++||+  ++|+|++||.
T Consensus         3 d~~~~~IkV~cR~rP~n~~E~~~~~~~i~~~~~~--~~~v~~~~~~~~~~y~FDrVF~pnatQe~Vy~~~a~~Iv~dVL~   80 (607)
T KOG0240|consen    3 DSAECSIKVVCRFRPLNGLENNLGSKFIDCFENG--ENTVVLETTKETKTYVFDRVFSPNATQEDVYEFAAKPIVDDVLL   80 (607)
T ss_pred             CCCCCceEEEEEeecCCchhhhcCCcCccCCCCC--cceEEEecccccccceeeeecCCCccHHHHHHHHHHHHHHHHhc
Confidence            4477999999999999999998888877766663  1222               3446679999999  9999999999


Q ss_pred             ccceeEEeee
Q psy5722          74 GQNDKEKRMT   83 (86)
Q Consensus        74 GYNgTIf~~~   83 (86)
                      |||||||+||
T Consensus        81 GYNGTvfaYG   90 (607)
T KOG0240|consen   81 GYNGTVFAYG   90 (607)
T ss_pred             ccceeEEEec
Confidence            9999999996

>KOG0243|consensus

Probab=99.76  E-value=6.2e-19  Score=146.91  Aligned_cols=73  Identities=25%  Similarity=0.295  Sum_probs=58.7

Q ss_pred             ccCCCeeEEEeecCCCchhhhcCCceeEecCCC-CC--------c----ceE----EeCCCCCccceee--hhhHHHHHH
Q psy5722          12 AAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSG-GE--------E----NGL----SLGIGTASESSSE--HTKLIGDVI   72 (86)
Q Consensus        12 ~~~~nIrV~vRvRPln~~E~~~g~~~~v~~~~~-~~--------~----~~v----~~~~~~tQ~~Vye--~~plV~~vl   72 (86)
                      +..-||+|+|||||+|++|.......+|..+.. ++        .    ..+    +|++++.|++||+  +.|+|+.||
T Consensus        46 e~~~NIqVivRcRp~n~~E~~~~s~~VVs~~~~~kEV~v~~~~~sk~~~k~ftFDkVFGpes~Q~d~Y~~~v~p~i~eVl  125 (1041)
T KOG0243|consen   46 EKEVNIQVIVRCRPRNDRERKSKSSVVVSCDGIRKEVAVRQTIASKQIDKTFTFDKVFGPESQQEDLYDQAVSPIIKEVL  125 (1041)
T ss_pred             CCCCceEEEEEeCCCCchhhhcCCCeEEecCCCcceEEEecccccccccceeecceeeCcchhHHHHHHHHHHHHHHHHh
Confidence            344699999999999999998888777776652 10        0    011    3567789999999  999999999


Q ss_pred             cccceeEEeeee
Q psy5722          73 TGQNDKEKRMTV   84 (86)
Q Consensus        73 ~GYNgTIf~~~~   84 (86)
                      .||||||||||-
T Consensus       126 ~GyNCTIFAYGQ  137 (1041)
T KOG0243|consen  126 EGYNCTIFAYGQ  137 (1041)
T ss_pred             ccCCceEEEecC
Confidence            999999999983

>KOG0239|consensus

Probab=99.68  E-value=2.7e-17  Score=133.37  Aligned_cols=73  Identities=22%  Similarity=0.288  Sum_probs=54.6

Q ss_pred             ccCCCeeEEEeecCCCchhhhcCCceeEecCCC----------CCcc---eE----EeCCCCCccceee-hhhHHHHHHc
Q psy5722          12 AAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSG----------GEEN---GL----SLGIGTASESSSE-HTKLIGDVIT   73 (86)
Q Consensus        12 ~~~~nIrV~vRvRPln~~E~~~g~~~~v~~~~~----------~~~~---~v----~~~~~~tQ~~Vye-~~plV~~vl~   73 (86)
                      .++|||||+||+||+...|.......++..+.+          .+..   .+    +|++..+|++||+ +.|+|+++||
T Consensus       311 eLkGnIRV~CRvRP~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~fdkVf~p~~sQ~~VF~e~~~lv~S~lD  390 (670)
T KOG0239|consen  311 ELKGNIRVFCRVRPLLPSEKQRLQSKVIDTEEQGEVQVDSPDKGDKLEPQSFKFDKVFGPLASQDDVFEEVSPLVQSALD  390 (670)
T ss_pred             HhhcCceEEEEecCCCccccccccccccccCCcceeEeecCCCCCCCccccceeeeecCCcccHHHHHHHHHHHHHHHhc
Confidence            478999999999999998876433333222221          0011   12    4567889999999 9999999999


Q ss_pred             ccceeEEeeee
Q psy5722          74 GQNDKEKRMTV   84 (86)
Q Consensus        74 GYNgTIf~~~~   84 (86)
                      |||.||||||-
T Consensus       391 GYnVCIFAYGQ  401 (670)
T KOG0239|consen  391 GYNVCIFAYGQ  401 (670)
T ss_pred             CcceeEEEecc
Confidence            99999999984

>cd01370 KISc_KIP3_like Kinesin motor domain, KIP3-like subgroup

Probab=99.64  E-value=1.9e-16  Score=118.82  Aligned_cols=69  Identities=26%  Similarity=0.368  Sum_probs=54.0

Q ss_pred             CeeEEEeecCCCchhhhcCCceeEecCCCC---------------------CcceEE----eCCCCCccceee--hhhHH
Q psy5722          16 SIRVVCRFRPLNHSEEKAGSKFIVKFPSGG---------------------EENGLS----LGIGTASESSSE--HTKLI   68 (86)
Q Consensus        16 nIrV~vRvRPln~~E~~~g~~~~v~~~~~~---------------------~~~~v~----~~~~~tQ~~Vye--~~plV   68 (86)
                      +|+|+||+||++.+|...+...++.+.++.                     +...+.    |++..+|++||+  ++|||
T Consensus         1 ~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~f~Fd~vf~~~~~q~~vf~~~~~plv   80 (338)
T cd01370           1 SLTVAVRVRPFNEKEKQEGTRRVVKVVDDRMLVFDPKDEEDAFRNLRARRNKELKYSFDRVFDETSTQEEVYENTTKPLV   80 (338)
T ss_pred             CeEEEEEcCCCChhhhhcCCceEEEEcCCCEEEEcCCcccccccchhcccCCceEEEeccccCCCCCHHHHHHHHHHHHH
Confidence            699999999999999887777666654420                     011122    245669999999  88999


Q ss_pred             HHHHcccceeEEeeee
Q psy5722          69 GDVITGQNDKEKRMTV   84 (86)
Q Consensus        69 ~~vl~GYNgTIf~~~~   84 (86)
                      +++|+|||+|||+||-
T Consensus        81 ~~~~~G~n~~i~ayGq   96 (338)
T cd01370          81 DGVLNGYNATVFAYGA   96 (338)
T ss_pred             HHHHCCCCceEEeeCC
Confidence            9999999999999984

The yeast kinesin KIP3 plays a role in positioning the mitotic spindle. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a sec

>cd01373 KISc_KLP2_like Kinesin motor domain, KLP2-like subgroup

Probab=99.63  E-value=3.3e-16  Score=117.53  Aligned_cols=69  Identities=23%  Similarity=0.253  Sum_probs=53.6

Q ss_pred             CeeEEEeecCCCchhhhcCCceeEecCCCC-------CcceE----EeCCCCCccceee--hhhHHHHHHcccceeEEee
Q psy5722          16 SIRVVCRFRPLNHSEEKAGSKFIVKFPSGG-------EENGL----SLGIGTASESSSE--HTKLIGDVITGQNDKEKRM   82 (86)
Q Consensus        16 nIrV~vRvRPln~~E~~~g~~~~v~~~~~~-------~~~~v----~~~~~~tQ~~Vye--~~plV~~vl~GYNgTIf~~   82 (86)
                      +|||+||+||++..|...+...++....+.       ....+    .|++..+|++||+  ++|+|+++|+|||+|||+|
T Consensus         2 ~i~V~vRvRP~~~~e~~~~~~~~v~~~~~~~~~~~~~~~~~f~FD~vf~~~~~q~~vy~~~~~p~v~~~~~G~n~ti~aY   81 (337)
T cd01373           2 AVKVVVRIRPPNEIEADGGQGQCLKKLSSDTLVWHSHPPRMFTFDHVADSNTNQEDVFQSVGKPLVEDCLSGYNGSIFAY   81 (337)
T ss_pred             CeEEEEEcCcCChhhcccCCCeEEEEcCCCcEEeeCCCCcEEeCCeEeCCCCCHHHHHHHHHHHHHHHHhCCCceeEEEe
Confidence            799999999999999766666555544320       01222    3457779999999  8999999999999999999


Q ss_pred             ee
Q psy5722          83 TV   84 (86)
Q Consensus        83 ~~   84 (86)
                      |-
T Consensus        82 Gq   83 (337)
T cd01373          82 GQ   83 (337)
T ss_pred             CC
Confidence            84

Members of this subgroup seem to play a role in mitosis and meiosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second

>KOG4280|consensus

Probab=99.62  E-value=2.9e-16  Score=125.51  Aligned_cols=71  Identities=18%  Similarity=0.243  Sum_probs=55.6

Q ss_pred             CCCeeEEEeecCCCchhhhcCCceeEecCCCCC--------------cceE----EeCCCCCccceee--hhhHHHHHHc
Q psy5722          14 EDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGE--------------ENGL----SLGIGTASESSSE--HTKLIGDVIT   73 (86)
Q Consensus        14 ~~nIrV~vRvRPln~~E~~~g~~~~v~~~~~~~--------------~~~v----~~~~~~tQ~~Vye--~~plV~~vl~   73 (86)
                      .++++|++|+||++..+...+...++.++....              ...+    .|+.+.+|++||+  ++|||++||+
T Consensus         4 ~~~v~vvvr~rPl~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ftfD~vf~~~stQ~dvy~~~~~~lV~svl~   83 (574)
T KOG4280|consen    4 ACKVKVVVRVRPLSAAERSELLKSILSVDPAHGRVSLKNPVAGIEGKPKSFTFDAVFDSDSTQDDVYQETVAPLVESVLE   83 (574)
T ss_pred             ccceeEEEeecCCCchhhhhhhccccccccccceeeecCCcccccCCCCCceeeeeecCCCCHHHHHHHHhHHHHHHHhc
Confidence            468999999999999988777766655554210              0112    3456779999999  9999999999


Q ss_pred             ccceeEEeeee
Q psy5722          74 GQNDKEKRMTV   84 (86)
Q Consensus        74 GYNgTIf~~~~   84 (86)
                      ||||||||||=
T Consensus        84 GyNgtvFaYGQ   94 (574)
T KOG4280|consen   84 GYNGTVFAYGQ   94 (574)
T ss_pred             ccCceEEEecc
Confidence            99999999983

>cd01371 KISc_KIF3 Kinesin motor domain, kinesins II or KIF3_like proteins

Probab=99.60  E-value=1.1e-15  Score=114.23  Aligned_cols=68  Identities=24%  Similarity=0.355  Sum_probs=54.9

Q ss_pred             CCeeEEEeecCCCchhhhcCCceeEecCCCCCcceEE--------------------eCCCCCccceee--hhhHHHHHH
Q psy5722          15 DSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLS--------------------LGIGTASESSSE--HTKLIGDVI   72 (86)
Q Consensus        15 ~nIrV~vRvRPln~~E~~~g~~~~v~~~~~~~~~~v~--------------------~~~~~tQ~~Vye--~~plV~~vl   72 (86)
                      .+|+|+||+||++..|...+...++.++.+  ...+.                    |+...+|++||+  ++|+|++++
T Consensus         1 ~~i~V~vRvRP~~~~e~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~f~fd~vf~~~~~q~~vy~~~~~plv~~~~   78 (333)
T cd01371           1 ENVKVVVRCRPLNKREKSEGAPEIVGVDEN--RGQVTVHNPKADAKEPPKVFTFDAVYDPNSTQEDVYNETARPLVDSVL   78 (333)
T ss_pred             CCeEEEEEcCcCChhhhhcCCCeEEEEcCC--CCEEEEeCCcccccCCCceeeeccccCCCccHHHHHHHHHHHHHHHHh
Confidence            479999999999999988777766666543  12221                    345669999999  899999999


Q ss_pred             cccceeEEeeee
Q psy5722          73 TGQNDKEKRMTV   84 (86)
Q Consensus        73 ~GYNgTIf~~~~   84 (86)
                      +|||+|||+||-
T Consensus        79 ~G~n~~i~ayG~   90 (333)
T cd01371          79 EGYNGTIFAYGQ   90 (333)
T ss_pred             CCCceeEEecCC
Confidence            999999999984

Subgroup of kinesins, which form heterotrimers composed of 2 kinesins and one non-motor accessory subunit. Kinesins II play important roles in ciliary transport, and have been implicated in neuronal transport, melanosome transport, the secretory pathway, and mitosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In this group the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain

>cd01367 KISc_KIF2_like Kinesin motor domain, KIF2-like group

Probab=99.60  E-value=1.1e-15  Score=114.01  Aligned_cols=69  Identities=25%  Similarity=0.240  Sum_probs=52.8

Q ss_pred             CeeEEEeecCCCchhhhcCCceeEecCCCC-----------------CcceE----EeCCCCCccceee--hhhHHHHHH
Q psy5722          16 SIRVVCRFRPLNHSEEKAGSKFIVKFPSGG-----------------EENGL----SLGIGTASESSSE--HTKLIGDVI   72 (86)
Q Consensus        16 nIrV~vRvRPln~~E~~~g~~~~v~~~~~~-----------------~~~~v----~~~~~~tQ~~Vye--~~plV~~vl   72 (86)
                      +|+|+|||||+++.|...++..++.++.+.                 +....    .|++..+|++||+  ++|+|+++|
T Consensus         2 ~i~V~vRvRP~~~~e~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~f~FD~vf~~~~~q~~vf~~~~~plv~~~~   81 (322)
T cd01367           2 KITVAVRKRPLNDKELSKGETDVVSCESNPTVTVHEPKTKVDLTKYIEKHTFRFDYVFDEAVTNEEVYRSTVKPLIPHVF   81 (322)
T ss_pred             CeEEEEEcCcCChhhhccCCceEEEECCCCEEEEecCccccccccccCCceEecceEECCCCCHHHHHHHHHHHHHHHHh
Confidence            799999999999999866655554444420                 01112    2346669999999  999999999


Q ss_pred             cccceeEEeeee
Q psy5722          73 TGQNDKEKRMTV   84 (86)
Q Consensus        73 ~GYNgTIf~~~~   84 (86)
                      +|||+|||+||-
T Consensus        82 ~G~n~~i~ayGq   93 (322)
T cd01367          82 EGGVATCFAYGQ   93 (322)
T ss_pred             CCCceEEEeccC
Confidence            999999999984

KIF2 is a protein expressed in neurons, which has been associated with axonal transport and neuron development; alternative splice forms have been implicated in lysosomal translocation. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In this subgroup the motor domain is found in the middle (M-type) of the protein chain. M-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second (KIF2 may be slower). To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and lo

>cd01369 KISc_KHC_KIF5 Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup

Probab=99.59  E-value=1.8e-15  Score=112.47  Aligned_cols=67  Identities=40%  Similarity=0.587  Sum_probs=56.1

Q ss_pred             CCeeEEEeecCCCchhhhcCCceeEecCCCCCcceEE---------------eCCCCCccceee--hhhHHHHHHcccce
Q psy5722          15 DSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLS---------------LGIGTASESSSE--HTKLIGDVITGQND   77 (86)
Q Consensus        15 ~nIrV~vRvRPln~~E~~~g~~~~v~~~~~~~~~~v~---------------~~~~~tQ~~Vye--~~plV~~vl~GYNg   77 (86)
                      ++|+|+||+||+++.|...+...++.++++   .++.               |++..+|++||+  ++|+|+++++|||+
T Consensus         2 ~~i~V~vRvRP~~~~e~~~~~~~~v~~~~~---~~v~~~~~~~~~~f~FD~vf~~~~~q~~vy~~~~~~~v~~~~~G~n~   78 (325)
T cd01369           2 CNIKVVCRFRPLNEKEELRGSKSIVKFPGE---DTVSIAGSDDGKTFSFDRVFPPNTTQEDVYNFVAKPIVDDVLNGYNG   78 (325)
T ss_pred             CCeEEEEEcCcCChhhhccCCceEEEEcCC---CEEEecCCCCceEEEcCeEECCCCCHHHHHHHHHHHHHHHHHcCccc
Confidence            689999999999999977777777777663   3332               346679999999  89999999999999


Q ss_pred             eEEeeee
Q psy5722          78 KEKRMTV   84 (86)
Q Consensus        78 TIf~~~~   84 (86)
                      |||+||-
T Consensus        79 ~i~ayG~   85 (325)
T cd01369          79 TIFAYGQ   85 (325)
T ss_pred             eEEEeCC
Confidence            9999995

Members of this group have been associated with organelle transport. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-c

>cd01365 KISc_KIF1A_KIF1B Kinesin motor domain, KIF1_like proteins

Probab=99.58  E-value=2.2e-15  Score=113.53  Aligned_cols=70  Identities=26%  Similarity=0.339  Sum_probs=54.5

Q ss_pred             CCeeEEEeecCCCchhhhcCCceeEecCCC--------------CCcceEE----eCCC-------CCccceee--hhhH
Q psy5722          15 DSIRVVCRFRPLNHSEEKAGSKFIVKFPSG--------------GEENGLS----LGIG-------TASESSSE--HTKL   67 (86)
Q Consensus        15 ~nIrV~vRvRPln~~E~~~g~~~~v~~~~~--------------~~~~~v~----~~~~-------~tQ~~Vye--~~pl   67 (86)
                      ++|+|+||+||++..|...+...++.+++.              .....+.    |++.       .+|++||+  ++|+
T Consensus         1 ~~i~V~vRvRP~~~~E~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~f~FD~vf~~~~~~~~~~~tq~~vf~~~~~p~   80 (356)
T cd01365           1 ANVKVAVRVRPFNSREKNRGSKCIVQMPGKVTTLKNPKAADATRKKPKSFSFDHSYWSHDSEDPHYASQEDVFEDLGREL   80 (356)
T ss_pred             CCEEEEEEeCcCChhhhccCCceEEEECCCEEEEEcCCcccccccCceEEECCeEecccCCCCCCCCCHHHHHHHHHHHH
Confidence            479999999999999988777766655542              0012222    2344       79999999  8999


Q ss_pred             HHHHHcccceeEEeeee
Q psy5722          68 IGDVITGQNDKEKRMTV   84 (86)
Q Consensus        68 V~~vl~GYNgTIf~~~~   84 (86)
                      |+++|+|||+|||+||-
T Consensus        81 v~~~l~G~n~~i~ayGq   97 (356)
T cd01365          81 LDHAFEGYNVCLFAYGQ   97 (356)
T ss_pred             HHHHhCCCceEEEEecC
Confidence            99999999999999984

KIF1A (Unc104) transports synaptic vesicles to the nerve terminal, KIF1B has been implicated in transport of mitochondria. Both proteins are expressed in neurons. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. In contrast to the majority of dimeric kinesins, most KIF1A/Unc104 kinesins are monomeric motors. A lysine-rich loop in KIF1A binds to the negatively charged C-terminus of tubulin and compensates for the lack of a second motor domain, allowing KIF1A to move processively.

>cd01368 KISc_KIF23_like Kinesin motor domain, KIF23-like subgroup

Probab=99.58  E-value=2e-15  Score=113.68  Aligned_cols=69  Identities=22%  Similarity=0.306  Sum_probs=52.6

Q ss_pred             CeeEEEeecCCCchhhhcCCceeEecCCCC---------------------CcceE----EeCCCCCccceee--hhhHH
Q psy5722          16 SIRVVCRFRPLNHSEEKAGSKFIVKFPSGG---------------------EENGL----SLGIGTASESSSE--HTKLI   68 (86)
Q Consensus        16 nIrV~vRvRPln~~E~~~g~~~~v~~~~~~---------------------~~~~v----~~~~~~tQ~~Vye--~~plV   68 (86)
                      +|+|+||+||++..|...+...++.+.++.                     .+..+    .|++..+|++||+  ++|+|
T Consensus         2 ~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~f~Fd~vf~~~~tq~~vy~~~~~p~v   81 (345)
T cd01368           2 PVKVYLRVRPLSKDELESEDEGCIEVINSTTIQLHPPKGSAARKSERNGGQKETKFSFSKVFGPNTTQKEFFEGTALPLV   81 (345)
T ss_pred             CEEEEEEeCcCCchhhccCCCceEEEcCCCEEEEeCCccccccccccccCCCceEeecCeEECCCCCHHHHHHHHHHHHH
Confidence            699999999999999876666555544320                     01111    2346679999999  89999


Q ss_pred             HHHHcccceeEEeeee
Q psy5722          69 GDVITGQNDKEKRMTV   84 (86)
Q Consensus        69 ~~vl~GYNgTIf~~~~   84 (86)
                      +++|+|||+|||+||-
T Consensus        82 ~~~l~G~n~ti~aYGq   97 (345)
T cd01368          82 QDLLKGKNSLLFTYGV   97 (345)
T ss_pred             HHHhCCCceEEEEeCC
Confidence            9999999999999984

Members of this group may play a role in mitosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, a

>cd01364 KISc_BimC_Eg5 Kinesin motor domain, BimC/Eg5 spindle pole proteins, participate in spindle assembly and chromosome segregation during cell division

Probab=99.57  E-value=3e-15  Score=112.45  Aligned_cols=69  Identities=23%  Similarity=0.322  Sum_probs=55.1

Q ss_pred             CCCeeEEEeecCCCchhhhcCCceeEecCCCCCcceE---------------E----eCCCCCccceee--hhhHHHHHH
Q psy5722          14 EDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGL---------------S----LGIGTASESSSE--HTKLIGDVI   72 (86)
Q Consensus        14 ~~nIrV~vRvRPln~~E~~~g~~~~v~~~~~~~~~~v---------------~----~~~~~tQ~~Vye--~~plV~~vl   72 (86)
                      +.||+|+||+||++..|...++..++.++.+  ...|               .    |+++.+|++||+  ++|+|++++
T Consensus         1 ~~~i~V~vRvRP~~~~e~~~~~~~~i~~~~~--~~~i~~~~~~~~~~~~~~f~Fd~vf~~~~~q~~vy~~~~~plv~~~~   78 (352)
T cd01364           1 ESNIQVVVRCRPRNSRERKEKSSVVVEVSGS--SKEIIVSTGGADKQSTKTYTFDKVFGPEADQIEVYSQVVSPILDEVL   78 (352)
T ss_pred             CCCEEEEEEcCcCCccccccCCCeEEEEcCC--CcEEEEcCCCcccccceeEeccccCCCCCCHHHHHHHHHHHHHHHHh
Confidence            3689999999999999977666666666543  1222               2    245669999999  899999999


Q ss_pred             cccceeEEeeee
Q psy5722          73 TGQNDKEKRMTV   84 (86)
Q Consensus        73 ~GYNgTIf~~~~   84 (86)
                      +|||+|||+||-
T Consensus        79 ~G~n~~i~ayG~   90 (352)
T cd01364          79 MGYNCTIFAYGQ   90 (352)
T ss_pred             CCCeEEEEECCC
Confidence            999999999984

This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type), N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil d

>cd01372 KISc_KIF4 Kinesin motor domain, KIF4-like subfamily

Probab=99.56  E-value=3.5e-15  Score=111.41  Aligned_cols=68  Identities=25%  Similarity=0.323  Sum_probs=54.8

Q ss_pred             CCeeEEEeecCCCchhhhcCCceeEecCCCCCcce--------EE----eCCCCCccceee--hhhHHHHHHcccceeEE
Q psy5722          15 DSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENG--------LS----LGIGTASESSSE--HTKLIGDVITGQNDKEK   80 (86)
Q Consensus        15 ~nIrV~vRvRPln~~E~~~g~~~~v~~~~~~~~~~--------v~----~~~~~tQ~~Vye--~~plV~~vl~GYNgTIf   80 (86)
                      ++|+|+||+||++..|...+...++.+.+.  +..        +.    |+...+|++||+  ++|+|+++|+|||+|||
T Consensus         1 ~~i~V~vRvRP~~~~e~~~~~~~~~~~~~~--~~~v~~~~~~~f~FD~vf~~~~~q~~vy~~~~~plv~~~~~G~n~~i~   78 (341)
T cd01372           1 SSVRVAVRVRPLLPKELLEGCQVCVSVVPG--EPQVTVGTDKSFTFDYVFDPSTSQEEVYNTCVAPLVDGLFEGYNATVL   78 (341)
T ss_pred             CCeEEEEECCCCCchhcccCCCeEEEEeCC--CCEEEecCCcEEeccccCCCCCCHHHHHHHHHHHHHHHHhCCCcccee
Confidence            369999999999999987777666666543  122        22    345679999999  88999999999999999


Q ss_pred             eeee
Q psy5722          81 RMTV   84 (86)
Q Consensus        81 ~~~~   84 (86)
                      +||-
T Consensus        79 ayG~   82 (341)
T cd01372          79 AYGQ   82 (341)
T ss_pred             eecC
Confidence            9984

Members of this group seem to perform a variety of functions, and have been implicated in neuronal organelle transport and chromosome segregation during mitosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain,

>KOG0245|consensus

Probab=99.56  E-value=3.1e-15  Score=124.95  Aligned_cols=68  Identities=18%  Similarity=0.271  Sum_probs=56.3

Q ss_pred             CCeeEEEeecCCCchhhhcCCceeEecCCCCCcceE------------EeC-------C----CCCccceee--hhhHHH
Q psy5722          15 DSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGL------------SLG-------I----GTASESSSE--HTKLIG   69 (86)
Q Consensus        15 ~nIrV~vRvRPln~~E~~~g~~~~v~~~~~~~~~~v------------~~~-------~----~~tQ~~Vye--~~plV~   69 (86)
                      .+|+|+||+||+|++|....+++++.+..+  ..++            +|+       +    ..+|..||+  +.||++
T Consensus         4 ssv~VAVRVRPfn~rE~s~~~k~Vvqm~gn--~ttii~~~~~k~~~~FtfD~SYWS~d~edPhfAsQ~qVYedlg~~mL~   81 (1221)
T KOG0245|consen    4 SSVKVAVRVRPFNAREKSRDAKCVVQMQGN--TTTIINPKGSKDAPKFTFDYSYWSHDSEDPHFASQKQVYEDLGREMLD   81 (1221)
T ss_pred             CceEEEEEeccchhhhhhcccceEEEecCC--ceeeecCCCcccCCceecceeeecCCCCCCchhhHHHHHHHHhHHHHH
Confidence            579999999999999998888888888764  2333            222       1    128999999  999999


Q ss_pred             HHHcccceeEEeeee
Q psy5722          70 DVITGQNDKEKRMTV   84 (86)
Q Consensus        70 ~vl~GYNgTIf~~~~   84 (86)
                      .+++|||+||||||=
T Consensus        82 ~AfEGYN~ClFAYGQ   96 (1221)
T KOG0245|consen   82 HAFEGYNVCLFAYGQ   96 (1221)
T ss_pred             HHhcccceEEEEecc
Confidence            999999999999983

>PLN03188 kinesin-12 family protein; Provisional

Probab=99.53  E-value=8.3e-15  Score=124.19  Aligned_cols=69  Identities=19%  Similarity=0.351  Sum_probs=51.7

Q ss_pred             CCCeeEEEeecCCCchhhhcCCceeEecCCCC---CcceE----EeCCCCCccceee--hhhHHHHHHcccceeEEeeee
Q psy5722          14 EDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGG---EENGL----SLGIGTASESSSE--HTKLIGDVITGQNDKEKRMTV   84 (86)
Q Consensus        14 ~~nIrV~vRvRPln~~E~~~g~~~~v~~~~~~---~~~~v----~~~~~~tQ~~Vye--~~plV~~vl~GYNgTIf~~~~   84 (86)
                      +++|+|+||+||++..|.  +...+..+..+.   ....+    .|++..+|++||+  ++|||+++|+|||+||||||-
T Consensus        97 ds~VkV~VRVRPl~~~E~--g~~iV~~~s~dsl~I~~qtFtFD~VFdp~aTQedVFe~vv~PLV~svLdGyNaTIFAYGQ  174 (1320)
T PLN03188         97 DSGVKVIVRMKPLNKGEE--GEMIVQKMSNDSLTINGQTFTFDSIADPESTQEDIFQLVGAPLVENCLAGFNSSVFAYGQ  174 (1320)
T ss_pred             CCCeEEEEEcCCCCCccC--CCeeEEEcCCCeEEEeCcEEeCCeeeCCCCCHHHHHHHHHHHHHHHHhcCCcceeecCCC
Confidence            569999999999998863  444444333310   01222    3467789999999  899999999999999999994

>cd01374 KISc_CENP_E Kinesin motor domain, CENP-E/KIP2-like subgroup, involved in chromosome movement and/or spindle elongation during mitosis

Probab=99.53  E-value=1.1e-14  Score=108.15  Aligned_cols=68  Identities=18%  Similarity=0.247  Sum_probs=51.7

Q ss_pred             CeeEEEeecCCCchhhhcCCceeEecCCC--------CCcceE----EeCCCCCccceee--hhhHHHHHHcccceeEEe
Q psy5722          16 SIRVVCRFRPLNHSEEKAGSKFIVKFPSG--------GEENGL----SLGIGTASESSSE--HTKLIGDVITGQNDKEKR   81 (86)
Q Consensus        16 nIrV~vRvRPln~~E~~~g~~~~v~~~~~--------~~~~~v----~~~~~~tQ~~Vye--~~plV~~vl~GYNgTIf~   81 (86)
                      +|+|+||+||++..|.. +...++.++.+        .....+    .|+...+|++||+  ++|+|+++|+|||+|||+
T Consensus         1 ~V~V~vRvRP~~~~e~~-~~~~~~~~~~~~~v~~~~~~~~~~f~fd~vf~~~~~q~~vy~~~~~p~v~~~l~G~n~~i~a   79 (321)
T cd01374           1 KIKVSVRVRPLNPRESD-NEQVAWSIDNDNTISLEESTPGQSFTFDRVFGGESTNREVYERIAKPVVRSALEGYNGTIFA   79 (321)
T ss_pred             CeEEEEEcCcCCccccc-CCcceEEECCCCEEEEcCCCCCeEEecCeEECCCCCHHHHHHHHHHHHHHHHHCCCceeEEe
Confidence            69999999999999873 34445544442        001222    3456679999999  899999999999999999


Q ss_pred             eee
Q psy5722          82 MTV   84 (86)
Q Consensus        82 ~~~   84 (86)
                      ||-
T Consensus        80 yG~   82 (321)
T cd01374          80 YGQ   82 (321)
T ss_pred             ecC
Confidence            984

This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to

>KOG0242|consensus

Probab=99.48  E-value=2.8e-14  Score=115.99  Aligned_cols=72  Identities=25%  Similarity=0.288  Sum_probs=52.0

Q ss_pred             cCCCeeEEEeecCCCchhhhcCCceeEecCCC-----------CCc---ceE----EeCCCCCccceee--hhhHHHHHH
Q psy5722          13 AEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSG-----------GEE---NGL----SLGIGTASESSSE--HTKLIGDVI   72 (86)
Q Consensus        13 ~~~nIrV~vRvRPln~~E~~~g~~~~v~~~~~-----------~~~---~~v----~~~~~~tQ~~Vye--~~plV~~vl   72 (86)
                      .+..|.|+||+||++.+|...+.........+           .+.   ...    +|+.+.+|++||+  ++|||++||
T Consensus         4 ~~~~i~V~vrvRP~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~y~FD~VF~~~~t~~~VYe~~tkpiv~~~l   83 (675)
T KOG0242|consen    4 TEEKILVSVRVRPLNEREDARGDRSDWHCINDTTLFKRVTKSLPEKSKPEKYEFDRVFGEESTQEDVYERTTKPLLLSVL   83 (675)
T ss_pred             ccceeEEEEEeCCCCccccccCCccceEecCCceeEeeccccccccccccceeeeeecCCCCCHHHHHHhccHHHHHHHh
Confidence            34689999999999998654444322111111           000   112    4567889999999  999999999


Q ss_pred             cccceeEEeeee
Q psy5722          73 TGQNDKEKRMTV   84 (86)
Q Consensus        73 ~GYNgTIf~~~~   84 (86)
                      .||||||||||.
T Consensus        84 ~G~N~TVFAYG~   95 (675)
T KOG0242|consen   84 EGFNATVFAYGQ   95 (675)
T ss_pred             cCcccceeeecC
Confidence            999999999995

>cd01376 KISc_KID_like Kinesin motor domain, KIF22/Kid-like subgroup

Probab=99.47  E-value=5.8e-14  Score=104.53  Aligned_cols=67  Identities=27%  Similarity=0.330  Sum_probs=48.3

Q ss_pred             CeeEEEeecCCCchhhhcCCceeEec-CCC---------------CCcceE----EeCCCCCccceee--hhhHHHHHHc
Q psy5722          16 SIRVVCRFRPLNHSEEKAGSKFIVKF-PSG---------------GEENGL----SLGIGTASESSSE--HTKLIGDVIT   73 (86)
Q Consensus        16 nIrV~vRvRPln~~E~~~g~~~~v~~-~~~---------------~~~~~v----~~~~~~tQ~~Vye--~~plV~~vl~   73 (86)
                      +|+|+||+||+++.|..  ...++.. +.+               .+...+    .|+...+|++||+  ++|+|+++++
T Consensus         1 ~i~V~vRvRP~~~~e~~--~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~~f~FD~vf~~~~~q~~vy~~~~~plv~~~~~   78 (319)
T cd01376           1 NVRVVVRVRPFLDCEED--SSSCVRGIDSDQGQAKSVEIENPRNRGETKKYQFDAFYGTECTQEDIFSREVKPIVPHLLS   78 (319)
T ss_pred             CcEEEEEeCcCCccccC--CCceEEEeCCCCCcceEEEEeCCCCCCCccEEecCeEECCCCCHHHHHHHHHHHHHHHHhC
Confidence            69999999999988842  2222222 221               001112    2346679999999  9999999999


Q ss_pred             ccceeEEeeee
Q psy5722          74 GQNDKEKRMTV   84 (86)
Q Consensus        74 GYNgTIf~~~~   84 (86)
                      |||+|||+||-
T Consensus        79 G~n~~i~ayG~   89 (319)
T cd01376          79 GQNATVFAYGS   89 (319)
T ss_pred             CCceEEEEECC
Confidence            99999999984

Members of this group might play a role in regulating chromosomal movement along microtubules in mitosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through

>cd01366 KISc_C_terminal Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins

Probab=99.45  E-value=1.2e-13  Score=102.73  Aligned_cols=70  Identities=26%  Similarity=0.398  Sum_probs=51.5

Q ss_pred             CCCeeEEEeecCCCchhhhcCCceeEecCCC-----------CCcceE----EeCCCCCccceee-hhhHHHHHHcccce
Q psy5722          14 EDSIRVVCRFRPLNHSEEKAGSKFIVKFPSG-----------GEENGL----SLGIGTASESSSE-HTKLIGDVITGQND   77 (86)
Q Consensus        14 ~~nIrV~vRvRPln~~E~~~g~~~~v~~~~~-----------~~~~~v----~~~~~~tQ~~Vye-~~plV~~vl~GYNg   77 (86)
                      +++|+|+||+||+...|. .....++.++++           .+...+    .|+.+.+|++||+ ++|+|+++++|||+
T Consensus         1 ~~~i~V~vRirP~~~~e~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~fD~vf~~~~~q~~v~~~v~p~v~~~~~G~~~   79 (329)
T cd01366           1 KGNIRVFCRVRPLLPSES-TEYSSVISFPDEDGGTIELSKGTGKKKSFSFDRVFDPDASQEDVFEEVSPLVQSALDGYNV   79 (329)
T ss_pred             CCCEEEEEEcCcCCcccc-CCCccEEEEcCCCceEEEEeCCCCCceEEecCEEECCCCCHHHHHHHHHHHHHHHhCCCce
Confidence            478999999999999875 222233344432           001222    2346679999999 99999999999999


Q ss_pred             eEEeeee
Q psy5722          78 KEKRMTV   84 (86)
Q Consensus        78 TIf~~~~   84 (86)
                      |||+||-
T Consensus        80 ~i~ayG~   86 (329)
T cd01366          80 CIFAYGQ   86 (329)
T ss_pred             EEEEeCC
Confidence            9999984

Ncd is a spindle motor protein necessary for chromosome segregation in meiosis. KIFC2/KIFC3-like kinesins have been implicated in motility of the Golgi apparatus as well as dentritic and axonal transport in neurons. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In this subgroup the motor domain is found at the C-terminus (C-type). C-type kinesins are (-) end-directed motors, i.e. they transport cargo towards the (-) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for mi

>KOG0241|consensus

Probab=99.42  E-value=1.5e-13  Score=115.02  Aligned_cols=71  Identities=15%  Similarity=0.239  Sum_probs=55.9

Q ss_pred             CCCeeEEEeecCCCchhhhcCCceeEecCCCCC----------------cceEEeC-----------CCCCccceee--h
Q psy5722          14 EDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGE----------------ENGLSLG-----------IGTASESSSE--H   64 (86)
Q Consensus        14 ~~nIrV~vRvRPln~~E~~~g~~~~v~~~~~~~----------------~~~v~~~-----------~~~tQ~~Vye--~   64 (86)
                      ..+|||+||+||+|.+|++...++++.++....                +.++.|+           .-+.|++||+  +
T Consensus         3 ~~kVkVaVRVRP~nrREl~l~tk~vv~vd~~q~vl~~~pp~~~~~~~k~pktFAFDhcF~s~dpes~n~agQE~Vf~~lG   82 (1714)
T KOG0241|consen    3 DAKVKVAVRVRPMNRRELELSTKCVVEVDKNQTVLHPPPPNHKIGESKGPKTFAFDHCFWSMDPESKNYAGQETVFKCLG   82 (1714)
T ss_pred             CcceEEEEEecccchhhhcccccceEEeccCceeecCCCccccccccCCCceeecccccccCCccccccccchhHHHhcc
Confidence            468999999999999999998888888876310                1112221           1128999999  8


Q ss_pred             hhHHHHHHcccceeEEeeee
Q psy5722          65 TKLIGDVITGQNDKEKRMTV   84 (86)
Q Consensus        65 ~plV~~vl~GYNgTIf~~~~   84 (86)
                      .-+|+++|+|||+|||+||-
T Consensus        83 ~~il~naf~GyNaCifaYGQ  102 (1714)
T KOG0241|consen   83 EGILENAFQGYNACIFAYGQ  102 (1714)
T ss_pred             hHHHHHHhhccceeeEEecc
Confidence            88999999999999999983

>smart00129 KISc Kinesin motor, catalytic domain

Probab=99.37  E-value=9.2e-13  Score=97.97  Aligned_cols=68  Identities=31%  Similarity=0.412  Sum_probs=53.9

Q ss_pred             CeeEEEeecCCCchhhhcCCceeEecCCCCCcceEE------------------eCCCCCccceee--hhhHHHHHHccc
Q psy5722          16 SIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLS------------------LGIGTASESSSE--HTKLIGDVITGQ   75 (86)
Q Consensus        16 nIrV~vRvRPln~~E~~~g~~~~v~~~~~~~~~~v~------------------~~~~~tQ~~Vye--~~plV~~vl~GY   75 (86)
                      +|+|+||+||++..|...+...++.+..+. ..++.                  |+.+.+|+++|+  ++|+|+++++||
T Consensus         1 ~v~v~vRvrP~~~~e~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~f~fD~vf~~~~~q~~v~~~~~~p~v~~~~~G~   79 (335)
T smart00129        1 NIRVVVRVRPLNKREKSRKSPSVVPFDDKD-GKTLNVNSPKNRKEEKKFTFDKVFGATASQEDVFEETAAPLVDSVLEGY   79 (335)
T ss_pred             CcEEEEEcCcCCccchhcCCceEEEEcCCC-CCEEEEeCCCCCCCCeEEecCEEECCCCChHHHHHHHHHHHHHHHhcCC
Confidence            589999999999999877766666665421 12222                  345669999999  889999999999


Q ss_pred             ceeEEeeee
Q psy5722          76 NDKEKRMTV   84 (86)
Q Consensus        76 NgTIf~~~~   84 (86)
                      |+|||+||-
T Consensus        80 ~~~i~~yG~   88 (335)
T smart00129       80 NATIFAYGQ   88 (335)
T ss_pred             ceeEEEeCC
Confidence            999999985

ATPase. Microtubule-dependent molecular motors that play important roles in intracellular transport of organelles and in cell division.

>cd00106 KISc Kinesin motor domain

Probab=99.35  E-value=1.4e-12  Score=96.57  Aligned_cols=68  Identities=24%  Similarity=0.320  Sum_probs=49.3

Q ss_pred             CeeEEEeecCCCchhhhcCCceeEecCCC-------------CCcceE----EeCCCCCccceee--hhhHHHHHHcccc
Q psy5722          16 SIRVVCRFRPLNHSEEKAGSKFIVKFPSG-------------GEENGL----SLGIGTASESSSE--HTKLIGDVITGQN   76 (86)
Q Consensus        16 nIrV~vRvRPln~~E~~~g~~~~v~~~~~-------------~~~~~v----~~~~~~tQ~~Vye--~~plV~~vl~GYN   76 (86)
                      +|+|+||+||+...|. .+...++.++.+             ..+...    .|+.+.+|++||+  ++|+|+++++|||
T Consensus         1 ~i~V~vRvrP~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~f~fd~vf~~~~~q~~v~~~~~~~~v~~~~~G~~   79 (328)
T cd00106           1 NIRVVVRIRPLNGRES-KSEESCITVDDNKTVTLTPPKDGRKAGPKSFTFDHVFDPNSTQEDVYETTAKPLVESVLEGYN   79 (328)
T ss_pred             CeEEEEEcCCCCcccc-cCCCcEEEECCCCEEEEecCccccCcCceEEECCeEEcCCCCHHHHHHHHHHHHHHHHhCCCc
Confidence            5899999999998762 233344444441             001222    2346679999999  8899999999999


Q ss_pred             eeEEeeee
Q psy5722          77 DKEKRMTV   84 (86)
Q Consensus        77 gTIf~~~~   84 (86)
                      +|||+||-
T Consensus        80 ~~i~~yG~   87 (328)
T cd00106          80 GTIFAYGQ   87 (328)
T ss_pred             eeEEEecC
Confidence            99999995

This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type), in some its is found in the middle (M-type), or C-terminal (C-type). N-type and M-type kinesins are (+) end-directed motors, while C-type kinesins are (-) end-directed motors, i.e. they transport cargo towards the (-) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coil

>cd01375 KISc_KIF9_like Kinesin motor domain, KIF9-like subgroup; might play a role in cell shape remodeling

Probab=99.31  E-value=1.9e-12  Score=97.01  Aligned_cols=68  Identities=18%  Similarity=0.283  Sum_probs=45.7

Q ss_pred             CeeEEEeecCCCchhhhc------CCceeEecCCC---------CCcceEE----eCCCCCccceee--hhhHHHHHHcc
Q psy5722          16 SIRVVCRFRPLNHSEEKA------GSKFIVKFPSG---------GEENGLS----LGIGTASESSSE--HTKLIGDVITG   74 (86)
Q Consensus        16 nIrV~vRvRPln~~E~~~------g~~~~v~~~~~---------~~~~~v~----~~~~~tQ~~Vye--~~plV~~vl~G   74 (86)
                      .|||+||+||++..|...      +...-+..+.+         .+...+.    |+. .+|++||+  ++|+|+++|+|
T Consensus         1 ~i~V~vRvRP~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~f~FD~vf~~-~~q~~vy~~~~~p~v~~~~~G   79 (334)
T cd01375           1 TIQVFVRVRPTPTKQGSSIKLGPDGKSVSSNLPKDLVRGVVNNQQEDFSFKFDGVFHN-ASQEEVYETVAKPVVDSALDG   79 (334)
T ss_pred             CeEEEEECCCCCCCCCccEEEcCCCCEEEEecccccccccccCCcCceEEEcCcccCC-CCHHHHHHHHHHHHHHHHhCC
Confidence            489999999999854321      01001111111         0012233    346 89999999  89999999999


Q ss_pred             cceeEEeeee
Q psy5722          75 QNDKEKRMTV   84 (86)
Q Consensus        75 YNgTIf~~~~   84 (86)
                      ||+|||+||-
T Consensus        80 ~n~~i~ayG~   89 (334)
T cd01375          80 YNGTIFAYGQ   89 (334)
T ss_pred             CccceeeecC
Confidence            9999999984

This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80

>PF00225 Kinesin: Kinesin motor domain; InterPro: IPR001752 Kinesin [, , ] is a microtubule-associated force-producing protein that may play a role in organelle transport

Probab=99.16  E-value=2.4e-11  Score=90.18  Aligned_cols=63  Identities=25%  Similarity=0.345  Sum_probs=46.5

Q ss_pred             eecCCCchhhhcCCceeEecCCC--------------CCcceE----EeCCCCCccceee--hhhHHHHHHcccceeEEe
Q psy5722          22 RFRPLNHSEEKAGSKFIVKFPSG--------------GEENGL----SLGIGTASESSSE--HTKLIGDVITGQNDKEKR   81 (86)
Q Consensus        22 RvRPln~~E~~~g~~~~v~~~~~--------------~~~~~v----~~~~~~tQ~~Vye--~~plV~~vl~GYNgTIf~   81 (86)
                      |+||++..|...+...++.....              ......    .|+...+|++||+  ++|+|+++|+|||+|||+
T Consensus         1 RvRP~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~FD~vf~~~~~q~~vy~~~~~~~v~~~l~G~n~~i~a   80 (335)
T PF00225_consen    1 RVRPLNESEKESSAESIVSVDNQDSNQNKQSVNSNNSQKEKSFRFDRVFDEDATQEDVYEEVVSPLVDSVLDGYNATIFA   80 (335)
T ss_dssp             EEES-CHHHHHTTTEBCEEEETTETEEEEEETTEEETTEEEEEEESEEEETTSTHHHHHHHHTHHHHHHHHTT-EEEEEE
T ss_pred             CcCCCCHHHHhCCCcEEEEecCCccccccccccccCCCCceEEEcCeEECCCCCHHHHHHHHHHHHHHHhhcCCceEEEe
Confidence            89999999998887765543310              001112    3457789999999  899999999999999999


Q ss_pred             eee
Q psy5722          82 MTV   84 (86)
Q Consensus        82 ~~~   84 (86)
                      ||.
T Consensus        81 yG~   83 (335)
T PF00225_consen   81 YGQ   83 (335)
T ss_dssp             EES
T ss_pred             ecc
Confidence            995

The kinesin motor activity is directed toward the microtubule's plus end. Kinesin is an oligomeric complex composed of two heavy chains and two light chains. The maintenance of the quaternary structure does not require interchain disulphide bonds. The heavy chain is composed of three structural domains: a large globular N-terminal domain which is responsible for the motor activity of kinesin (it is known to hydrolyse ATP, to bind and move on microtubules), a central alpha-helical coiled coil domain that mediates the heavy chain dimerisation; and a small globular C-terminal domain which interacts with other proteins (such as the kinesin light chains), vesicles and membranous organelles. A number of proteins have been recently found that contain a domain similar to that of the kinesin 'motor' domain [, ]: Drosophila melanogaster claret segregational protein (ncd). Ncd is required for normal chromosomal segregation in meiosis, in females, and in early mitotic divisions of the embryo. The ncd motor activity is directed toward the microtubule's minus end. Homo sapiens CENP-E []. CENP-E is a protein that associates with kinetochores during chromosome congression, relocates to the spindle midzone at anaphase, and is quantitatively discarded at the end of the cell division. CENP-E is probably an important motor molecule in chromosome movement and/or spindle elongation. H. sapiens mitotic kinesin-like protein-1 (MKLP-1), a motor protein whose activity is directed toward the microtubule's plus end. Saccharomyces cerevisiae KAR3 protein, which is essential for nuclear fusion during mating. KAR3 may mediate microtubule sliding during nuclear fusion and possibly mitosis. S. cerevisiae CIN8 and KIP1 proteins which are required for the assembly of the mitotic spindle. Both proteins seem to interact with spindle microtubules to produce an outwardly directed force acting upon the poles. Emericella nidulans (Aspergillus nidulans) bimC, which plays an important role in nuclear division. A. nidulans klpA. Caenorhabditis elegans unc-104, which may be required for the transport of substances needed for neuronal cell differentiation. C. elegans osm-3. Xenopus laevis Eg5, which may be involved in mitosis. Arabidopsis thaliana KatA, KatB and katC. Chlamydomonas reinhardtii FLA10/KHP1 and KLP1. Both proteins seem to play a role in the rotation or twisting of the microtubules of the flagella. C. elegans hypothetical protein T09A5.2. The kinesin motor domain is located in the N-terminal part of most of the above proteins, with the exception of KAR3, klpA, and ncd where it is located in the C-terminal section. The kinesin motor domain contains about 330 amino acids. An ATP-binding motif of type A is found near position 80 to 90, the C-terminal half of the domain is involved in microtubule-binding.; GO: 0003777 microtubule motor activity, 0005524 ATP binding, 0007018 microtubule-based movement; PDB: 3NWN_A 2Y5W_A 2Y65_C 3BFN_A 2WBE_C 2ZFL_A 2ZFI_A 1I6I_A 2ZFM_A 1IA0_K ....

>KOG0246|consensus

Probab=98.92  E-value=1.5e-09  Score=87.40  Aligned_cols=69  Identities=23%  Similarity=0.235  Sum_probs=57.4

Q ss_pred             cCCCeeEEEeecCCCchhhhcCCceeEecCCCCCcceE------------------------EeCCCCCccceee--hhh
Q psy5722          13 AEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGL------------------------SLGIGTASESSSE--HTK   66 (86)
Q Consensus        13 ~~~nIrV~vRvRPln~~E~~~g~~~~v~~~~~~~~~~v------------------------~~~~~~tQ~~Vye--~~p   66 (86)
                      .+..|.|+||=||||.+|....+.-+++++++   +.+                        .|+...+.+.||.  ++|
T Consensus       206 ~ehrI~VCVRKRPLnkkE~~~keiDvisvps~---~~l~vHEpk~kVDLtkYlEn~~F~FDyaFDe~~sNe~VYrfTa~P  282 (676)
T KOG0246|consen  206 NEHRICVCVRKRPLNKKELTKKEIDVISVPSK---NVLVVHEPKLKVDLTKYLENQKFRFDYAFDESASNELVYRFTAKP  282 (676)
T ss_pred             ccceEEEEeecCCCCchhccccccceEecccc---ceEEeeccccccchHHHHhhceEEEeeecccccchHHHHHHhhhH
Confidence            44579999999999999998877777777663   221                        3456679999999  999


Q ss_pred             HHHHHHcccceeEEeeee
Q psy5722          67 LIGDVITGQNDKEKRMTV   84 (86)
Q Consensus        67 lV~~vl~GYNgTIf~~~~   84 (86)
                      ||+.+++|=-+|+||||-
T Consensus       283 lV~~IF~~G~ATCFAYGQ  300 (676)
T KOG0246|consen  283 LVKTIFEGGMATCFAYGQ  300 (676)
T ss_pred             HHHHHHhCCceeeeeecc
Confidence            999999999999999983

>KOG0247|consensus

Probab=98.56  E-value=6.5e-08  Score=79.64  Aligned_cols=76  Identities=26%  Similarity=0.453  Sum_probs=51.5

Q ss_pred             ccccCCCeeEEEeecCCCchhhhcCCceeEe------c-CCC--------CC--cceE----EeCCCCCccceee--hhh
Q psy5722          10 EIAAEDSIRVVCRFRPLNHSEEKAGSKFIVK------F-PSG--------GE--ENGL----SLGIGTASESSSE--HTK   66 (86)
Q Consensus        10 ~~~~~~nIrV~vRvRPln~~E~~~g~~~~v~------~-~~~--------~~--~~~v----~~~~~~tQ~~Vye--~~p   66 (86)
                      +......+.|+||+||+...-...|+-.++.      . +.+        ..  +..+    .|++..+|.+||+  +.|
T Consensus        26 S~~~~d~v~v~~rvrP~~~~~~~~g~l~v~n~~tivL~~P~d~~~~~~~n~~q~e~~fsFt~VF~p~~tQ~dvF~~~~~p  105 (809)
T KOG0247|consen   26 SCESKDPVLVVCRVRPLSDASEDEGCLRVINEETIVLETPEDSFARRSVNGGQMEKKFSFTKVFGPSVTQADVFDTTVAP  105 (809)
T ss_pred             chhhhcchheeEeecCCCCCccccceEEEeccceeEeeCcHHHHhhhccCccceeeEeeeeeecCCCccHHHHHHHHhHH
Confidence            3445567999999999985322333322211      1 110        00  0111    3567789999999  999


Q ss_pred             HHHHHHcccceeEEeeeec
Q psy5722          67 LIGDVITGQNDKEKRMTVH   85 (86)
Q Consensus        67 lV~~vl~GYNgTIf~~~~~   85 (86)
                      ||.++|.|-|+-+|-|||-
T Consensus       106 lV~dlLkgqn~LlFTyGVT  124 (809)
T KOG0247|consen  106 LVKDLLKGQNSLLFTYGVT  124 (809)
T ss_pred             HHHHHHcccceeEEEeecc
Confidence            9999999999999999984

>COG5059 KIP1 Kinesin-like protein [Cytoskeleton]

Probab=98.52  E-value=8.9e-08  Score=76.89  Aligned_cols=69  Identities=20%  Similarity=0.165  Sum_probs=45.8

Q ss_pred             CCeeEEEeecCCCchh-hhc-CCceeEecCCCCCcceE----EeCCCCCccceee--hhhHHHHHHcccceeEEeeee
Q psy5722          15 DSIRVVCRFRPLNHSE-EKA-GSKFIVKFPSGGEENGL----SLGIGTASESSSE--HTKLIGDVITGQNDKEKRMTV   84 (86)
Q Consensus        15 ~nIrV~vRvRPln~~E-~~~-g~~~~v~~~~~~~~~~v----~~~~~~tQ~~Vye--~~plV~~vl~GYNgTIf~~~~   84 (86)
                      .++++.++.+|-...+ ... .....+...... ...+    .|++..+|++||+  ++|+++++|.|||||||+||-
T Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~fdkvf~~~~~q~~v~e~~~~~l~~~~l~g~N~TvfayGq   98 (568)
T COG5059          22 SDIKSTIRIIPGELGERLINTSKKSHVSLEKSK-EGTYAFDKVFGPSATQEDVYEETIKPLIDSLLLGYNCTVFAYGQ   98 (568)
T ss_pred             cCceEEEeecCCCcchheeeccccccccccccc-ceEEEEeeccCCCCcHHHHHHHhhhhHHHHHHhcccceEEEEcc
Confidence            4678888888865543 111 111112121110 1223    4567789999999  999999999999999999983

>KOG0244|consensus

Probab=98.48  E-value=5.9e-08  Score=81.15  Aligned_cols=59  Identities=19%  Similarity=0.245  Sum_probs=49.7

Q ss_pred             ecCCCchhhhcCCceeEecCCCCCcceEEeCC------------CCCccceee--hhhHHHHHHcccceeEEeee
Q psy5722          23 FRPLNHSEEKAGSKFIVKFPSGGEENGLSLGI------------GTASESSSE--HTKLIGDVITGQNDKEKRMT   83 (86)
Q Consensus        23 vRPln~~E~~~g~~~~v~~~~~~~~~~v~~~~------------~~tQ~~Vye--~~plV~~vl~GYNgTIf~~~   83 (86)
                      +|||..+|...|+..|+++.+.  ..++.+++            ...|.++|+  +.||++.+++|||+|+-|||
T Consensus         1 vRpl~~~e~~~g~~~c~~~~~~--~pqv~ig~~~s~t~d~v~~~~~~Q~~~~e~~V~~l~~~lf~gynatvlayg   73 (913)
T KOG0244|consen    1 VRPLKQMEEEQGCRRCTEVSPR--TPQVAIGKDASFTYDKVFLDLESQKEVYESCVRPLREKLFAGYNATVLAYG   73 (913)
T ss_pred             CCCccchHHHhcchhhcccCCC--CCceeecCCcceeeeeeccCchHHHHHHHHHHHHHHHHHhhhhcceeeeec
Confidence            6999999999999999885443  45565543            337999999  99999999999999999998

>cd01363 Motor_domain Myosin and Kinesin motor domain

Probab=98.42  E-value=1.2e-07  Score=65.77  Aligned_cols=24  Identities=13%  Similarity=-0.057  Sum_probs=21.9

Q ss_pred             eee-hhhHHHHHHcccceeEEeeee
Q psy5722          61 SSE-HTKLIGDVITGQNDKEKRMTV   84 (86)
Q Consensus        61 Vye-~~plV~~vl~GYNgTIf~~~~   84 (86)
                      ||+ +.|+|+++++|||+|||+||-
T Consensus         8 vf~~~~~~v~~~~~G~n~~i~~yG~   32 (186)
T cd01363           8 VFRDVGPLLQSALDGYNVCIFAYGQ   32 (186)
T ss_pred             HHHHHHHHHHHHhCCcceeEEEECC
Confidence            899 449999999999999999984

These ATPases belong to the P-loop NTPase family and provide the driving force in myosin and kinesin mediated processes.

>PF12444 Sox_N: Sox developmental protein N terminal ; InterPro: IPR022151 This domain family is found in eukaryotes, and is typically between 69 and 88 amino acids in length

Probab=80.61  E-value=1.6  Score=27.45  Aligned_cols=28  Identities=14%  Similarity=0.140  Sum_probs=23.0

Q ss_pred             Cccceee--hhhHHHHHHcccceeEEeeee
Q psy5722          57 ASESSSE--HTKLIGDVITGQNDKEKRMTV   84 (86)
Q Consensus        57 tQ~~Vye--~~plV~~vl~GYNgTIf~~~~   84 (86)
                      ..++-|-  ++.-|-.||+||.+|+--|.|
T Consensus        53 ~~d~~fp~~IrdAVsqVLkGYDWtLVPmPv   82 (84)
T PF12444_consen   53 DEDDRFPVCIRDAVSQVLKGYDWTLVPMPV   82 (84)
T ss_pred             cccccccHHHHHHHHHHhccCCceeeeccc
Confidence            3455566  999999999999999988865

The family is found in association with PF00505 from PFAM. There are two conserved sequence motifs: YDW and PVR. This family contains Sox8, Sox9 and Sox10 proteins which have structural similarity. Sox proteins are involved in developmental processes.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	86
2y5w_A	365	Crystal Structure Of Drosophila Melanogaster Kinesi		1e-15
1mkj_A	349	Human Kinesin Motor Domain With Docked Neck Linker		4e-05
1bg2_A	325	Human Ubiquitous Kinesin Motor Domain Length = 325		4e-05
4atx_C	340	Rigor Kinesin Motor Domain With An Ordered Neck-Lin		6e-05
2kin_A	238	Kinesin (Monomeric) From Rattus Norvegicus Length =		7e-05

>pdb|2Y5W|A Chain A, Crystal Structure Of Drosophila Melanogaster Kinesin-1 Motor Domain Dimer Length = 365

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 35/47 (74%), Positives = 41/47 (87%)
Query: 7  ADREIAAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLSLG 53
          A+REI AEDSI+VVCRFRPLN SEEKAGSKF+VKFP+  EEN +S+ 
Sbjct: 3  AEREIPAEDSIKVVCRFRPLNDSEEKAGSKFVVKFPNNVEENCISIA 49

>pdb|1MKJ|A Chain A, Human Kinesin Motor Domain With Docked Neck Linker Length = 349

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 18/29 (62%), Positives = 22/29 (75%)
Query: 13 AEDSIRVVCRFRPLNHSEEKAGSKFIVKF 41
          AE +I+V+CRFRPLN SE   G K+I KF
Sbjct: 5  AECNIKVMCRFRPLNESEVNRGDKYIAKF 33

>pdb|1BG2|A Chain A, Human Ubiquitous Kinesin Motor Domain Length = 325

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 18/29 (62%), Positives = 22/29 (75%)
Query: 13 AEDSIRVVCRFRPLNHSEEKAGSKFIVKF 41
          AE +I+V+CRFRPLN SE   G K+I KF
Sbjct: 5  AECNIKVMCRFRPLNESEVNRGDKYIAKF 33

>pdb|4ATX|C Chain C, Rigor Kinesin Motor Domain With An Ordered Neck-Linker, Docked On Tubulin Dimer, Modelled Into The 8a Cryo-Em Map Of Doublecortin-Microtubules Decorated With Kinesin Length = 340

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 14/76 (18%)
Query: 13 AEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLSLGIGTA------SESSSEHT- 65
          AE +I+V+CRFRPLN SE   G K++ KF   GE+  +      A      S +S E   
Sbjct: 5  AECNIKVMCRFRPLNESEVNRGDKYVAKFQ--GEDTVMIASKPYAFDRVFQSSTSQEQVY 62
Query: 66 -----KLIGDVITGQN 76
               K++ DV+ G N
Sbjct: 63 NDCAKKIVKDVLEGYN 78

>pdb|2KIN|A Chain A, Kinesin (Monomeric) From Rattus Norvegicus Length = 238

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 22/35 (62%), Positives = 25/35 (71%), Gaps = 2/35 (5%)
Query: 13 AEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEE 47
          AE SI+V+CRFRPLN +E   G KFI KF   GEE
Sbjct: 4  AECSIKVMCRFRPLNEAEILRGDKFIPKF--KGEE 36

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	86
2y65_A	365	Kinesin, kinesin heavy chain; motor protein; HET:	7e-10
1bg2_A	325	Kinesin; motor protein, ATPase, microtubule associ	3e-08
3b6u_A	372	Kinesin-like protein KIF3B; structural genomics co	7e-08
2wbe_C	373	Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mit	1e-07
2zfi_A	366	Kinesin-like protein KIF1A, kinesin heavy chain is	2e-07
1goj_A	355	Kinesin, kinesin heavy chain; motor protein, ATPas	2e-07
4a14_A	344	Kinesin, kinesin-like protein KIF7; motor protein,	2e-07
1t5c_A	349	CENP-E protein, centromeric protein E; kinesin mot	2e-07
1x88_A	359	Kinesin-like protein KIF11; switch II, motor domai	4e-07
3dc4_A	344	Kinesin-like protein NOD; catalytic domain, ATPase	7e-07
2vvg_A	350	Kinesin-2; motor protein, nucleotide-binding, micr	7e-07
3cob_A	369	Kinesin heavy chain-like protein; motor, switch II	7e-07
3bfn_A	388	Kinesin-like protein KIF22; limited proteolysis, s	8e-07
4etp_A	403	Kinesin-like protein KAR3; kinesin motor protein,	9e-07
1f9v_A	347	Kinesin-like protein KAR3; kinesin-related protein	1e-06
3t0q_A	349	AGR253WP; kinesin, alpha and beta proteins, P-loop	1e-06
1ry6_A	360	Internal kinesin; kinesin motor domain, nucleotide	4e-06
2rep_A	376	Kinesin-like protein KIFC1; structural genomics co	7e-06
2owm_A	443	Nckin3-434, related to kinesin-like protein KIF1C;	9e-06
2h58_A	330	Kinesin-like protein KIFC3 variant; motor domain,	1e-05
3gbj_A	354	KIF13B protein; kinesin, motor domain, ADP, struct	1e-05
3u06_A	412	Protein claret segregational; motor domain, stalk	3e-05
1v8k_A	410	Kinesin-like protein KIF2C; microtubule destabiliz	2e-04
3lre_A	355	Kinesin-like protein KIF18A; motor protein, nucleo	3e-04
2heh_A	387	KIF2C protein; kinesin, motor domain, ADP, structu	4e-04

>2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A* Length = 365

 Score = 52.6 bits (127), Expect = 7e-10
 Identities = 35/48 (72%), Positives = 41/48 (85%)

Query: 6  PADREIAAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLSLG 53
           A+REI AEDSI+VVCRFRPLN SEEKAGSKF+VKFP+  EEN +S+ 
Sbjct: 2  SAEREIPAEDSIKVVCRFRPLNDSEEKAGSKFVVKFPNNVEENCISIA 49

>1bg2_A Kinesin; motor protein, ATPase, microtubule associated; HET: ADP; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 2p4n_K* 1mkj_A* 2kin_A* 3kin_A* Length = 325

 Score = 48.0 bits (115), Expect = 3e-08
 Identities = 18/32 (56%), Positives = 22/32 (68%)

Query: 12 AAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPS 43
           AE +I+V+CRFRPLN SE   G K+I KF  
Sbjct: 4  LAECNIKVMCRFRPLNESEVNRGDKYIAKFQG 35

>3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A* Length = 372

 Score = 46.8 bits (112), Expect = 7e-08
 Identities = 16/60 (26%), Positives = 25/60 (41%)

Query: 2  SNNAPADREIAAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLSLGIGTASESS 61
          S+         + +S+RVV R RP+N  E+ A    +V       +  +    GTA E  
Sbjct: 8  SSGRENLYFQGSSESVRVVVRCRPMNGKEKAASYDKVVDVDVKLGQVSVKNPKGTAHEMP 67

>2wbe_C Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mitosis, GTP-binding, motor protein, cell division, cell cycle, microtubule, ATP-binding; HET: GTP ANP GDP TA1; 9.40A {Drosophila melanogaster} Length = 373

 Score = 46.1 bits (110), Expect = 1e-07
 Identities = 12/46 (26%), Positives = 17/46 (36%)

Query: 2  SNNAPADREIAAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEE 47
            N     +  +  +I+V  R RPLN  E    S  +V      E 
Sbjct: 10 GGNTSRQPQKKSNQNIQVYVRVRPLNSRERCIRSAEVVDVVGPREV 55

>2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C* Length = 366

 Score = 46.0 bits (110), Expect = 2e-07
 Identities = 11/32 (34%), Positives = 15/32 (46%)

Query: 13 AEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSG 44
          A  S++V  R RP N  E    SK I++    
Sbjct: 2  AGASVKVAVRVRPFNSREMSRDSKCIIQMSGS 33

>1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9 Length = 355

 Score = 45.6 bits (109), Expect = 2e-07
 Identities = 14/32 (43%), Positives = 21/32 (65%)

Query: 12 AAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPS 43
          ++ +SI+VV RFRP N  E ++G + IV F  
Sbjct: 3  SSANSIKVVARFRPQNRVEIESGGQPIVTFQG 34

>4a14_A Kinesin, kinesin-like protein KIF7; motor protein, motor domain; HET: ADP; 1.60A {Homo sapiens} PDB: 2xt3_A* Length = 344

 Score = 45.2 bits (108), Expect = 2e-07
 Identities = 11/43 (25%), Positives = 15/43 (34%)

Query: 5  APADREIAAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEE 47
                 A E  +RV  R RPL   E   G +  ++   G   
Sbjct: 1  GAMGLPGAEEAPVRVALRVRPLLPKELLHGHQSCLQVEPGLGR 43

>1t5c_A CENP-E protein, centromeric protein E; kinesin motor-domain-ADP complex, stranded beta-sheet core with solvent exposed alpha-helices; HET: ADP PIN; 2.50A {Homo sapiens} Length = 349

 Score = 45.3 bits (108), Expect = 2e-07
 Identities = 12/33 (36%), Positives = 16/33 (48%)

Query: 12 AAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSG 44
          A E ++ V  R RPLN  EE  G    V + + 
Sbjct: 1  AEEGAVAVCVRVRPLNSREESLGETAQVYWKTD 33

>1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ... Length = 359

 Score = 44.5 bits (106), Expect = 4e-07
 Identities = 15/53 (28%), Positives = 24/53 (45%)

Query: 9  REIAAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLSLGIGTASESS 61
          ++     +I+VV R RP N +E KA +  IV+     +E  +  G      S 
Sbjct: 2  KKEEKGKNIQVVVRCRPFNLAERKASAHSIVECDPVRKEVSVRTGGLADKSSR 54

>3dc4_A Kinesin-like protein NOD; catalytic domain, ATPase, microtubule, ADP, nucleotide-binding protein, ATP-binding, coiled coil, motor protein; HET: ADP; 1.90A {Drosophila melanogaster} PDB: 3dcb_A* 3dco_N* 3pxn_A* Length = 344

 Score = 44.1 bits (105), Expect = 7e-07
 Identities = 9/52 (17%), Positives = 17/52 (32%), Gaps = 1/52 (1%)

Query: 2  SNNAPADREIAAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLSLG 53
           +      E A   ++R+  R  P            +V+FP   +   L + 
Sbjct: 9  DDKRRRGMEGAKLSAVRIAVREAPYR-QFLGRREPSVVQFPPWSDGKSLIVD 59

>2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis} Length = 350

 Score = 44.1 bits (105), Expect = 7e-07
 Identities = 10/35 (28%), Positives = 19/35 (54%)

Query: 13 AEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEE 47
          + D+I+V+ R RPLN  E +  +  I++      +
Sbjct: 2  SSDNIKVIVRCRPLNARETRENALNIIRMDEASAQ 36

>3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A* Length = 369

 Score = 43.8 bits (104), Expect = 7e-07
 Identities = 10/31 (32%), Positives = 13/31 (41%)

Query: 16 SIRVVCRFRPLNHSEEKAGSKFIVKFPSGGE 46
           IRV CR RPL   E  A  +  ++      
Sbjct: 6  KIRVYCRLRPLCEKEIIAKERNAIRSVDEFT 36

>3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens} Length = 388

 Score = 43.8 bits (104), Expect = 8e-07
 Identities = 8/45 (17%), Positives = 11/45 (24%)

Query: 2  SNNAPADREIAAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGE 46
          S+             +RV  R RP       A     V+      
Sbjct: 8  SSGRENLYFQGPPARVRVAVRLRPFVDGTAGASDPPCVRGMDSCS 52

>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae} Length = 403

 Score = 43.8 bits (104), Expect = 9e-07
 Identities = 10/50 (20%), Positives = 18/50 (36%)

Query: 16  SIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLSLGIGTASESSSEHT 65
           +IRV  R RP   + E + +  I            S+ +     ++  H 
Sbjct: 60  NIRVYLRIRPALKNLENSDTSLINVNEFDDNSGVQSMEVTKIQNTAQVHE 109

>1f9v_A Kinesin-like protein KAR3; kinesin-related protein, motor protein, microtubinding proteinbule, contractIle protein; HET: ADP; 1.30A {Saccharomyces cerevisiae} SCOP: c.37.1.9 PDB: 1f9t_A* 1f9w_A* 1f9u_A* 3kar_A* Length = 347

 Score = 43.7 bits (104), Expect = 1e-06
 Identities = 11/50 (22%), Positives = 19/50 (38%)

Query: 16 SIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLSLGIGTASESSSEHT 65
          +IRV CR RP   + E + +  I            S+ +     ++  H 
Sbjct: 4  NIRVYCRIRPALKNLENSDTSLINVNEFDDNSGVQSMEVTKIQNTAQVHE 53

>3t0q_A AGR253WP; kinesin, alpha and beta proteins, P-loop containing nucleosi triphosphate hydrolases, microtubule motor protein; HET: ADP; 2.35A {Ashbya gossypii} Length = 349

 Score = 43.4 bits (103), Expect = 1e-06
 Identities = 12/50 (24%), Positives = 20/50 (40%), Gaps = 1/50 (2%)

Query: 16 SIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLSLGIGTASESSSEHT 65
          +IRV CR RP   +E +  S  +++      +   SL I         + 
Sbjct: 6  NIRVYCRVRPPLLNEPQDMSHILIEKF-NEAKGAQSLTINRNEGRILSYN 54

>1ry6_A Internal kinesin; kinesin motor domain, nucleotide-free, transport protein; 1.60A {Plasmodium falciparum} SCOP: c.37.1.9 Length = 360

 Score = 41.8 bits (99), Expect = 4e-06
 Identities = 10/30 (33%), Positives = 15/30 (50%)

Query: 17 IRVVCRFRPLNHSEEKAGSKFIVKFPSGGE 46
          I+VV R RPL+  E+K     I+   +   
Sbjct: 2  IKVVVRKRPLSELEKKKKDSDIITVKNNCT 31

>2rep_A Kinesin-like protein KIFC1; structural genomics consortium, motor domain, ADP, binding, cell cycle, cell division, endosome, microtubule; HET: ADP; 2.60A {Homo sapiens} Length = 376

 Score = 41.1 bits (97), Expect = 7e-06
 Identities = 9/48 (18%), Positives = 16/48 (33%)

Query: 16 SIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLSLGIGTASESSSE 63
          +IRV CR RP+   E       ++     G  +     +  +      
Sbjct: 23 NIRVFCRVRPVLPGEPTPPPGLLLFPSGPGGPSDPPTRLSLSRSDERR 70

>2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa} Length = 443

 Score = 40.8 bits (96), Expect = 9e-06
 Identities = 10/46 (21%), Positives = 18/46 (39%)

Query: 2  SNNAPADREIAAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEE 47
           + A +        ++RVV R R     E +  ++ IV+     E 
Sbjct: 25 DDTASSFVSKDPGANVRVVVRVRAFLPRELERNAECIVEMDPATER 70

>2h58_A Kinesin-like protein KIFC3 variant; motor domain, ADP, structural genomics, structur Al genomics consortium, SGC; HET: ADP; 1.85A {Homo sapiens} Length = 330

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 8/37 (21%), Positives = 17/37 (45%), Gaps = 1/37 (2%)

Query: 12 AAEDSIRVVCRFRPLNHSEEKAGS-KFIVKFPSGGEE 47
           ++ +IRV+ R RP+   + +       V F +  + 
Sbjct: 1  GSKGNIRVIARVRPVTKEDGEGPEATNAVTFDADDDS 37

>3gbj_A KIF13B protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, ATP-binding, microtubule, motor protein; HET: ADP; 2.10A {Homo sapiens} Length = 354

 Score = 40.2 bits (95), Expect = 1e-05
 Identities = 8/26 (30%), Positives = 13/26 (50%)

Query: 16 SIRVVCRFRPLNHSEEKAGSKFIVKF 41
           ++V  R RP+N  E    +K +V  
Sbjct: 2  KVKVAVRIRPMNRRETDLHTKCVVDV 27

>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A* Length = 412

 Score = 39.6 bits (93), Expect = 3e-05
 Identities = 15/52 (28%), Positives = 20/52 (38%), Gaps = 4/52 (7%)

Query: 15  DSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLSLGIGTASESSSEHTK 66
           D+IRV CR RP   SEE              +E+ + L    A   S    +
Sbjct: 59  DNIRVFCRIRPPLESEENRMCCTWTYH----DESTVELQSIDAQAKSKMGQQ 106

>1v8k_A Kinesin-like protein KIF2C; microtubule destabilizer, structural P; HET: ANP; 2.25A {Mus musculus} SCOP: c.37.1.9 PDB: 1v8j_A* 2gry_A* Length = 410

 Score = 36.8 bits (86), Expect = 2e-04
 Identities = 12/46 (26%), Positives = 16/46 (34%)

Query: 1   MSNNAPADREIAAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGE 46
           M  +     +   E  I V  R RPLN  E       ++  PS   
Sbjct: 57  MECSPLTVTDPIEEHRICVCVRKRPLNKQELAKKEIDVISVPSKCL 102

>3lre_A Kinesin-like protein KIF18A; motor protein, nucleotide binding, microtubule binding, ATP- cell projection, cytoskeleton, glycoprotein, microtubule; HET: ADP; 2.20A {Homo sapiens} Length = 355

 Score = 36.5 bits (85), Expect = 3e-04
 Identities = 14/69 (20%), Positives = 26/69 (37%), Gaps = 3/69 (4%)

Query: 15 DSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLSLGIGTASESSSEHTKLIGDVITG 74
            ++VV R RP N  E+ AG   +V      +++ L         S     K     +  
Sbjct: 10 HHMKVVVRVRPENTKEKAAGFHKVVHVV---DKHILVFDPKQEEVSFFHGKKTTNQNVIK 66

Query: 75 QNDKEKRMT 83
          + +K+ +  
Sbjct: 67 KQNKDLKFV 75

>2heh_A KIF2C protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, structural protein; HET: ADP; 2.15A {Homo sapiens} PDB: 3edl_D* Length = 387

 Score = 36.1 bits (84), Expect = 4e-04
 Identities = 11/46 (23%), Positives = 16/46 (34%)

Query: 1  MSNNAPADREIAAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGE 46
          +  +     +   E  I V  R RPLN  E       ++  PS   
Sbjct: 37 LECHPLTMTDPIEEHRICVCVRKRPLNKQELAKKEIDVISIPSKCL 82

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	86
2y65_A	365	Kinesin, kinesin heavy chain; motor protein; HET:	99.83
1bg2_A	325	Kinesin; motor protein, ATPase, microtubule associ	99.82
1x88_A	359	Kinesin-like protein KIF11; switch II, motor domai	99.78
4a14_A	344	Kinesin, kinesin-like protein KIF7; motor protein,	99.78
3lre_A	355	Kinesin-like protein KIF18A; motor protein, nucleo	99.77
3b6u_A	372	Kinesin-like protein KIF3B; structural genomics co	99.77
1goj_A	355	Kinesin, kinesin heavy chain; motor protein, ATPas	99.76
1t5c_A	349	CENP-E protein, centromeric protein E; kinesin mot	99.76
2wbe_C	373	Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mit	99.76
2heh_A	387	KIF2C protein; kinesin, motor domain, ADP, structu	99.76
3dc4_A	344	Kinesin-like protein NOD; catalytic domain, ATPase	99.76
3t0q_A	349	AGR253WP; kinesin, alpha and beta proteins, P-loop	99.75
2vvg_A	350	Kinesin-2; motor protein, nucleotide-binding, micr	99.75
2owm_A	443	Nckin3-434, related to kinesin-like protein KIF1C;	99.75
1v8k_A	410	Kinesin-like protein KIF2C; microtubule destabiliz	99.75
3cob_A	369	Kinesin heavy chain-like protein; motor, switch II	99.74
2h58_A	330	Kinesin-like protein KIFC3 variant; motor domain,	99.74
2zfi_A	366	Kinesin-like protein KIF1A, kinesin heavy chain is	99.72
3bfn_A	388	Kinesin-like protein KIF22; limited proteolysis, s	99.72
3gbj_A	354	KIF13B protein; kinesin, motor domain, ADP, struct	99.72
3nwn_A	359	Kinesin-like protein KIF9; motor domain, ADP, stru	99.71
3u06_A	412	Protein claret segregational; motor domain, stalk	99.71
2rep_A	376	Kinesin-like protein KIFC1; structural genomics co	99.7
1ry6_A	360	Internal kinesin; kinesin motor domain, nucleotide	99.68
1f9v_A	347	Kinesin-like protein KAR3; kinesin-related protein	99.67
4etp_A	403	Kinesin-like protein KAR3; kinesin motor protein,	99.67
2nr8_A	358	Kinesin-like protein KIF9; motor domain, ADP, stru	99.65
4h1g_A	715	Maltose binding protein-cakar3 motor domain fusio;	99.47
2o0a_A	298	S.cerevisiae chromosome XVI reading frame ORF YPL2	99.36

>2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A*

Probab=99.83  E-value=2.6e-21  Score=146.17  Aligned_cols=79  Identities=49%  Similarity=0.729  Sum_probs=61.3

Q ss_pred             ccccccccCCCeeEEEeecCCCchhhhcCCceeEecCCCCCcceE-----------EeCCCCCccceee--hhhHHHHHH
Q psy5722           6 PADREIAAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGL-----------SLGIGTASESSSE--HTKLIGDVI   72 (86)
Q Consensus         6 ~a~~~~~~~~nIrV~vRvRPln~~E~~~g~~~~v~~~~~~~~~~v-----------~~~~~~tQ~~Vye--~~plV~~vl   72 (86)
                      .+.|..+.+++|+|+||+||++++|...+...++.++.+.+...+           .|++..+|++||+  ++|||+++|
T Consensus         2 ~~~~~~~~~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~i~~~~~~f~FD~Vf~~~~~Q~~Vy~~~~~plv~~~l   81 (365)
T 2y65_A            2 SAEREIPAEDSIKVVCRFRPLNDSEEKAGSKFVVKFPNNVEENCISIAGKVYLFDKVFKPNASQEKVYNEAAKSIVTDVL   81 (365)
T ss_dssp             ------CCEEECEEEEEECCCCHHHHHTTCCBCEECCSSSTTCEEEETTEEEECSEEECTTCCHHHHHHHHTHHHHHHHH
T ss_pred             CccccCCCCCCeEEEEEcCcCChhHhccCCceEEEeCCCCCCcEEEECCEEEeCceEecCCCCHHHHHHHhhhhHHHHHh
Confidence            344577788999999999999999998888888777663112222           3457789999999  899999999


Q ss_pred             cccceeEEeeee
Q psy5722          73 TGQNDKEKRMTV   84 (86)
Q Consensus        73 ~GYNgTIf~~~~   84 (86)
                      +|||+||||||-
T Consensus        82 ~G~n~tifAYGq   93 (365)
T 2y65_A           82 AGYNGTIFAYGQ   93 (365)
T ss_dssp             TTCCEEEEEECS
T ss_pred             CCCceEEEeecC
Confidence            999999999994

>1bg2_A Kinesin; motor protein, ATPase, microtubule associated; HET: ADP; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 2p4n_K* 1mkj_A* 2kin_A* 3kin_A*

Probab=99.82  E-value=5.5e-21  Score=142.42  Aligned_cols=73  Identities=34%  Similarity=0.504  Sum_probs=60.8

Q ss_pred             cccccCCCeeEEEeecCCCchhhhcCCceeEecCCCCCcceE-----------EeCCCCCccceee--hhhHHHHHHccc
Q psy5722           9 REIAAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGL-----------SLGIGTASESSSE--HTKLIGDVITGQ   75 (86)
Q Consensus         9 ~~~~~~~nIrV~vRvRPln~~E~~~g~~~~v~~~~~~~~~~v-----------~~~~~~tQ~~Vye--~~plV~~vl~GY   75 (86)
                      |+++.+++|||+||+||++++|...++..++.++.+   ..+           .|++..+|++||+  ++|||+++|+||
T Consensus         1 ~~~~~~~~i~V~vRvRP~~~~E~~~~~~~~~~~~~~---~~~~~~~~~f~FD~Vf~~~~sQ~~Vy~~~~~plv~~~l~G~   77 (325)
T 1bg2_A            1 MADLAECNIKVMCRFRPLNESEVNRGDKYIAKFQGE---DTVVIASKPYAFDRVFQSSTSQEQVYNDCAKKIVKDVLEGY   77 (325)
T ss_dssp             --CCSSCEEEEEEEECCCCHHHHHHTCCBCCEEETT---TEEEETTEEEECSEEECTTCCHHHHHHHHTHHHHHHHHTTC
T ss_pred             CCCCCCCCEEEEEEcCCCChhHhccCCeeEEEECCC---CeEEECCEEEECCeEeCCCCCHHHHHHHHhhhhHHHHhCCC
Confidence            466778999999999999999998888777766653   333           3457789999999  899999999999


Q ss_pred             ceeEEeeee
Q psy5722          76 NDKEKRMTV   84 (86)
Q Consensus        76 NgTIf~~~~   84 (86)
                      |+||||||-
T Consensus        78 n~tifAYGq   86 (325)
T 1bg2_A           78 NGTIFAYGQ   86 (325)
T ss_dssp             CEEEEEECS
T ss_pred             eEEEEEECC
Confidence            999999994

>1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ...

Probab=99.78  E-value=1.2e-19  Score=136.68  Aligned_cols=75  Identities=24%  Similarity=0.263  Sum_probs=55.3

Q ss_pred             ccccCCCeeEEEeecCCCchhhhcCCceeEecCCCCC--------------cceE----EeCCCCCccceee--hhhHHH
Q psy5722          10 EIAAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGE--------------ENGL----SLGIGTASESSSE--HTKLIG   69 (86)
Q Consensus        10 ~~~~~~nIrV~vRvRPln~~E~~~g~~~~v~~~~~~~--------------~~~v----~~~~~~tQ~~Vye--~~plV~   69 (86)
                      ..+.+++|||+||+||++.+|...+...++.+++...              ...+    .|++..+|++||+  ++|||+
T Consensus         3 ~~~~~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~f~FD~Vf~~~~~Q~~Vy~~~~~plv~   82 (359)
T 1x88_A            3 KEEKGKNIQVVVRCRPFNLAERKASAHSIVECDPVRKEVSVRTGGLADKSSRKTYTFDMVFGASTKQIDVYRSVVCPILD   82 (359)
T ss_dssp             ------CCEEEEEECCCCHHHHHTTCCCCEEEETTTTEEEEEEEEETTEEEEEEEECSEEECTTCCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCeEEEEEeCCCChhhhhcCCceEEEEcCCCcEEEEeCCCccCCcCceEEeceEEEeccCchhHHHHHHHHHhHH
Confidence            3456789999999999999998887776665544210              0112    2357779999999  899999


Q ss_pred             HHHcccceeEEeeee
Q psy5722          70 DVITGQNDKEKRMTV   84 (86)
Q Consensus        70 ~vl~GYNgTIf~~~~   84 (86)
                      ++|+|||+||||||-
T Consensus        83 ~~l~G~n~tifAYGq   97 (359)
T 1x88_A           83 EVIMGYNCTIFAYGQ   97 (359)
T ss_dssp             HHHTTCEEEEEEEEC
T ss_pred             HHhCCCceEEEEeCC
Confidence            999999999999994

>4a14_A Kinesin, kinesin-like protein KIF7; motor protein, motor domain; HET: ADP; 1.60A {Homo sapiens} SCOP: c.37.1.0 PDB: 2xt3_A*

Probab=99.78  E-value=1.2e-19  Score=135.95  Aligned_cols=74  Identities=22%  Similarity=0.216  Sum_probs=58.5

Q ss_pred             cccCCCeeEEEeecCCCchhhhcCCceeEecCCCCC------cceE----EeCCCCCccceee--hhhHHHHHHccccee
Q psy5722          11 IAAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGE------ENGL----SLGIGTASESSSE--HTKLIGDVITGQNDK   78 (86)
Q Consensus        11 ~~~~~nIrV~vRvRPln~~E~~~g~~~~v~~~~~~~------~~~v----~~~~~~tQ~~Vye--~~plV~~vl~GYNgT   78 (86)
                      ...+++|||+||+||++++|...+...++.+.++..      +..+    .|++..+|++||+  ++|||+++|+|||+|
T Consensus         7 ~~~~~~i~V~vRvRP~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~f~FD~Vf~~~~~Q~~vy~~~~~plv~~~l~G~n~t   86 (344)
T 4a14_A            7 GAEEAPVRVALRVRPLLPKELLHGHQSCLQVEPGLGRVTLGRDRHFGFHVVLAEDAGQEAVYQACVQPLLEAFFEGFNAT   86 (344)
T ss_dssp             --CCCCCEEEEEECCCCHHHHHTTCCBCEEEEGGGTEEEETTTEEEECSEEECTTCCHHHHHHHHTHHHHHHHHTTCCEE
T ss_pred             CccccceEEEEEecccchHHHhccCeeEEEEcCCCceEEecccceEEEEEEEecCcchhHHHHHHHHHHHHHHHhhcCee
Confidence            446789999999999999999888777766554310      1122    3457789999999  999999999999999


Q ss_pred             EEeeee
Q psy5722          79 EKRMTV   84 (86)
Q Consensus        79 If~~~~   84 (86)
                      |||||-
T Consensus        87 ifAYGq   92 (344)
T 4a14_A           87 VFAYGQ   92 (344)
T ss_dssp             EEEESS
T ss_pred             EEEecc
Confidence            999984

>3lre_A Kinesin-like protein KIF18A; motor protein, nucleotide binding, microtubule binding, ATP- cell projection, cytoskeleton, glycoprotein, microtubule; HET: ADP; 2.20A {Homo sapiens} SCOP: c.37.1.0

Probab=99.77  E-value=1.5e-19  Score=136.05  Aligned_cols=75  Identities=20%  Similarity=0.223  Sum_probs=53.6

Q ss_pred             ccccCCCeeEEEeecCCCchhhhcCCceeEecCCC--------CC---------------------cceE----EeCCCC
Q psy5722          10 EIAAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSG--------GE---------------------ENGL----SLGIGT   56 (86)
Q Consensus        10 ~~~~~~nIrV~vRvRPln~~E~~~g~~~~v~~~~~--------~~---------------------~~~v----~~~~~~   56 (86)
                      ..+++++|||+||+||++++|+..|...++.+..+        .+                     +..+    .|++..
T Consensus         5 ~~d~~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~FD~vf~~~~   84 (355)
T 3lre_A            5 EEDLCHHMKVVVRVRPENTKEKAAGFHKVVHVVDKHILVFDPKQEEVSFFHGKKTTNQNVIKKQNKDLKFVFDAVFDETS   84 (355)
T ss_dssp             -------CEEEEEECCCCHHHHHTTCCBSEEECSSSEEEEC------------------------CCEEEECSEEECTTC
T ss_pred             hhhccCCCEEEEEeCcCChHHHhcCCceEEEecCCceEEecCCCCcceeecccccccccchhccCCCceEEeceEECCCC
Confidence            34567999999999999999998887766554321        00                     0112    235667


Q ss_pred             Cccceee--hhhHHHHHHcccceeEEeeee
Q psy5722          57 ASESSSE--HTKLIGDVITGQNDKEKRMTV   84 (86)
Q Consensus        57 tQ~~Vye--~~plV~~vl~GYNgTIf~~~~   84 (86)
                      +|++||+  ++|||+++|+|||+||||||-
T Consensus        85 ~Q~~Vy~~~~~plv~~~l~G~n~tifAYGq  114 (355)
T 3lre_A           85 TQSEVFEHTTKPILRSFLNGYNCTVLAYGA  114 (355)
T ss_dssp             CHHHHHHTTHHHHHHHHTTTCCEEEEEECC
T ss_pred             ChHHHHHHHHHHHHHHHhCCCceEEEEeCC
Confidence            9999999  899999999999999999985

>3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A*

Probab=99.77  E-value=2.2e-19  Score=136.09  Aligned_cols=78  Identities=19%  Similarity=0.161  Sum_probs=55.9

Q ss_pred             cccccccCCCeeEEEeecCCCchhhhcCCceeEecCCCC--------------CcceE----EeCCCCCccceee--hhh
Q psy5722           7 ADREIAAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGG--------------EENGL----SLGIGTASESSSE--HTK   66 (86)
Q Consensus         7 a~~~~~~~~nIrV~vRvRPln~~E~~~g~~~~v~~~~~~--------------~~~~v----~~~~~~tQ~~Vye--~~p   66 (86)
                      +......+++|||+||+||++++|...+...++.++.+.              ....+    .|++..+|++||+  ++|
T Consensus        13 ~~~~~~~~~~irV~vRvRP~~~~E~~~~~~~~v~~~~~~~~v~v~~~~~~~~~~~~~F~FD~Vf~~~~~Q~~Vy~~~~~p   92 (372)
T 3b6u_A           13 NLYFQGSSESVRVVVRCRPMNGKEKAASYDKVVDVDVKLGQVSVKNPKGTAHEMPKTFTFDAVYDWNAKQFELYDETFRP   92 (372)
T ss_dssp             --------CBCEEEEEECCCCHHHHHTTCCBCEEEETTTTEEEECCTTCTTTCCCEEEECSEEECTTCCHHHHHHHTHHH
T ss_pred             cCccCCCCCCeEEEEEcCCCChhhhccCCceEEEEeCCCCEEEEECCCCCCCCCceEEEcCeEeCCcCchHHHHHHHHHH
Confidence            444556778999999999999999888776666554320              01122    3356779999999  899


Q ss_pred             HHHHHHcccceeEEeeee
Q psy5722          67 LIGDVITGQNDKEKRMTV   84 (86)
Q Consensus        67 lV~~vl~GYNgTIf~~~~   84 (86)
                      ||+++|+|||+||||||-
T Consensus        93 lv~~~l~G~n~tifAYGq  110 (372)
T 3b6u_A           93 LVDSVLQGFNGTIFAYGQ  110 (372)
T ss_dssp             HHHHHHTTCCEEEEEEES
T ss_pred             HHHHHhCCCeeeEEeecC
Confidence            999999999999999984

>1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9

Probab=99.76  E-value=4.3e-19  Score=133.56  Aligned_cols=71  Identities=24%  Similarity=0.389  Sum_probs=58.0

Q ss_pred             CCCeeEEEeecCCCchhhhcCCceeEecCCCC--------CcceE----EeCCCCCccceee--hhhHHHHHHcccceeE
Q psy5722          14 EDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGG--------EENGL----SLGIGTASESSSE--HTKLIGDVITGQNDKE   79 (86)
Q Consensus        14 ~~nIrV~vRvRPln~~E~~~g~~~~v~~~~~~--------~~~~v----~~~~~~tQ~~Vye--~~plV~~vl~GYNgTI   79 (86)
                      .++|||+||+||++.+|...+...++.++.+.        ....+    .|++..+|++||+  ++|||+++|+|||+||
T Consensus         5 ~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~~~~~~~~~f~FD~Vf~~~~~Q~~Vy~~~~~plv~~~l~G~n~ti   84 (355)
T 1goj_A            5 ANSIKVVARFRPQNRVEIESGGQPIVTFQGPDTCTVDSKEAQGSFTFDRVFDMSCKQSDIFDFSIKPTVDDILNGYNGTV   84 (355)
T ss_dssp             SCBCEEEEEECCCCHHHHTTTCCBCEEECSTTEEEECSTTCCEEEECSEEECTTCCHHHHHHHHTHHHHHHHTTTCCEEE
T ss_pred             CCCeEEEEECCCCChHHhhcCCceEEEEcCCCeEEEccCCCccEEeeCeEECCCCccHHHHHHHHHHHHHHHhCCCcceE
Confidence            47899999999999999988887777766531        01122    3457789999999  9999999999999999


Q ss_pred             Eeeee
Q psy5722          80 KRMTV   84 (86)
Q Consensus        80 f~~~~   84 (86)
                      ||||-
T Consensus        85 fAYGq   89 (355)
T 1goj_A           85 FAYGQ   89 (355)
T ss_dssp             EEECS
T ss_pred             EEECC
Confidence            99994

>1t5c_A CENP-E protein, centromeric protein E; kinesin motor-domain-ADP complex, stranded beta-sheet core with solvent exposed alpha-helices; HET: ADP PIN; 2.50A {Homo sapiens}

Probab=99.76  E-value=2.7e-19  Score=134.40  Aligned_cols=72  Identities=22%  Similarity=0.304  Sum_probs=55.0

Q ss_pred             cCCCeeEEEeecCCCchhhhcCCceeEecCCCC-------CcceEE----eCCCCCccceee--hhhHHHHHHcccceeE
Q psy5722          13 AEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGG-------EENGLS----LGIGTASESSSE--HTKLIGDVITGQNDKE   79 (86)
Q Consensus        13 ~~~nIrV~vRvRPln~~E~~~g~~~~v~~~~~~-------~~~~v~----~~~~~tQ~~Vye--~~plV~~vl~GYNgTI   79 (86)
                      .+++|+|+||+||++++|...++..++.+..+.       ....+.    |++..+|++||+  ++|||+++|+|||+||
T Consensus         2 e~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~i~~~~~~~~F~FD~Vf~~~~tQ~~Vy~~~~~plv~~~l~G~n~ti   81 (349)
T 1t5c_A            2 EEGAVAVCVRVRPLNSREESLGETAQVYWKTDNNVIYQVDGSKSFNFDRVFHGNETTKNVYEEIAAPIIDSAIQGYNGTI   81 (349)
T ss_dssp             -CCCEEEEEEECCCSCSSCTTTTCCCCCEEEETTEEEETTSSCEEECSCEECTTSCHHHHHHHTTHHHHHHHHTTCCEEE
T ss_pred             CCCCEEEEEECCCCChhhhccCCCcEEEEeCCCCeEEECCCCeEEECCEEECCCCCHHHHHHHHHHHHHHHHHcCCccce
Confidence            368999999999999999877765443332210       012333    457789999999  8999999999999999


Q ss_pred             Eeeee
Q psy5722          80 KRMTV   84 (86)
Q Consensus        80 f~~~~   84 (86)
                      ||||-
T Consensus        82 fAYGq   86 (349)
T 1t5c_A           82 FAYGQ   86 (349)
T ss_dssp             EEEES
T ss_pred             eeecC
Confidence            99984

>2wbe_C Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mitosis, GTP-binding, motor protein, cell division, cell cycle, microtubule, ATP-binding; HET: GTP ANP GDP TA1; 9.40A {Drosophila melanogaster}

Probab=99.76  E-value=3.2e-19  Score=134.97  Aligned_cols=74  Identities=23%  Similarity=0.222  Sum_probs=57.3

Q ss_pred             cccCCCeeEEEeecCCCchhhhcCCceeEecCCCC-----------CcceE----EeCCCCCccceee--hhhHHHHHHc
Q psy5722          11 IAAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGG-----------EENGL----SLGIGTASESSSE--HTKLIGDVIT   73 (86)
Q Consensus        11 ~~~~~nIrV~vRvRPln~~E~~~g~~~~v~~~~~~-----------~~~~v----~~~~~~tQ~~Vye--~~plV~~vl~   73 (86)
                      ...+++|||+||+||++++|...+...++.+..+.           ....+    .|++..+|++||+  ++|||+++|+
T Consensus        19 ~~~~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~F~FD~vf~~~~~Q~~Vy~~~~~plv~~~l~   98 (373)
T 2wbe_C           19 KKSNQNIQVYVRVRPLNSRERCIRSAEVVDVVGPREVVTRHTLDSKLTKKFTFDRSFGPESKQCDVYSVVVSPLIEEVLN   98 (373)
T ss_dssp             CCCCEECEEEEEECCCCHHHHHHTCCBCEEEETTTEEEESSSSSSTTCEEEECSEEECTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCeEEEEEcCCCChhhhccCCCceEEEcCCCeEEEecCCCCCCceEEeccEEeccccchhHHHHHHHHHHHHHHhC
Confidence            34567999999999999999877666555544320           01122    3457789999999  9999999999


Q ss_pred             ccceeEEeeee
Q psy5722          74 GQNDKEKRMTV   84 (86)
Q Consensus        74 GYNgTIf~~~~   84 (86)
                      |||+||||||-
T Consensus        99 G~n~tifAYGq  109 (373)
T 2wbe_C           99 GYNCTVFAYGQ  109 (373)
T ss_dssp             TCCEEEEEECS
T ss_pred             CceEEEEeecC
Confidence            99999999984

>2heh_A KIF2C protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, structural protein; HET: ADP; 2.15A {Homo sapiens} PDB: 3edl_D*

Probab=99.76  E-value=6e-19  Score=134.35  Aligned_cols=72  Identities=19%  Similarity=0.241  Sum_probs=57.0

Q ss_pred             cCCCeeEEEeecCCCchhhhcCCceeEecCCCC-----------C------cceE----EeCCCCCccceee--hhhHHH
Q psy5722          13 AEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGG-----------E------ENGL----SLGIGTASESSSE--HTKLIG   69 (86)
Q Consensus        13 ~~~nIrV~vRvRPln~~E~~~g~~~~v~~~~~~-----------~------~~~v----~~~~~~tQ~~Vye--~~plV~   69 (86)
                      .+++|+|+||+||++++|...++..++.++.+.           +      ...+    .|++..+|++||+  ++|||+
T Consensus        49 ~~~~I~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~~v~~~~~~~~~~~~~~~~~F~FD~VF~~~~sQ~~Vy~~~~~plv~  128 (387)
T 2heh_A           49 EEHRICVCVRKRPLNKQELAKKEIDVISIPSKCLLLVHEPKLKVDLTKYLENQAFCFDFAFDETASNEVVYRFTARPLVQ  128 (387)
T ss_dssp             CCCSEEEEEEECCCCHHHHHTTCCBCEECCBSSEEEEEEEEECTTCCEEEEEEEEECSEEECTTCCHHHHHHHTTHHHHH
T ss_pred             CCCCeEEEEECCCCChHHhccCCceEEEECCCCEEEEeCCCccccccccccccEEeeeEEEecCCCceeehhhhHHHHHH
Confidence            368999999999999999887776666654420           0      0112    3457789999999  899999


Q ss_pred             HHHcccceeEEeeee
Q psy5722          70 DVITGQNDKEKRMTV   84 (86)
Q Consensus        70 ~vl~GYNgTIf~~~~   84 (86)
                      ++|+|||+||||||-
T Consensus       129 ~~l~G~N~tifAYGQ  143 (387)
T 2heh_A          129 TIFEGGKATCFAYGQ  143 (387)
T ss_dssp             HHHTTCEEEEEEESC
T ss_pred             HHhcCCceEEEEecC
Confidence            999999999999984

>3dc4_A Kinesin-like protein NOD; catalytic domain, ATPase, microtubule, ADP, nucleotide-binding protein, ATP-binding, coiled coil, motor protein; HET: ADP; 1.90A {Drosophila melanogaster} PDB: 3dcb_A* 3dco_N* 3pxn_A*

Probab=99.76  E-value=4.9e-19  Score=132.89  Aligned_cols=75  Identities=15%  Similarity=0.178  Sum_probs=52.0

Q ss_pred             cccccCCCeeEEEeecCCCchhhhcCCceeEecCCCCCcceE-----------EeCCCCCccceee--hhhHHHHHHccc
Q psy5722           9 REIAAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGL-----------SLGIGTASESSSE--HTKLIGDVITGQ   75 (86)
Q Consensus         9 ~~~~~~~nIrV~vRvRPln~~E~~~g~~~~v~~~~~~~~~~v-----------~~~~~~tQ~~Vye--~~plV~~vl~GY   75 (86)
                      |..+..++|||+||+||+++.|. .++..++.++...+...+           .|++..+|++||+  ++|||+++|+||
T Consensus        16 m~~~~~~~VrV~vRvRP~~~~e~-~~~~~~v~~~~~~~~~~~~~~~~~F~FD~Vf~~~~sQ~~Vy~~~~~plv~~~l~G~   94 (344)
T 3dc4_A           16 MEGAKLSAVRIAVREAPYRQFLG-RREPSVVQFPPWSDGKSLIVDQNEFHFDHAFPATISQDEMYQALILPLVDKLLEGF   94 (344)
T ss_dssp             ---CCCSEEEEEEEECCCC--------CCSEECCSSSCSSEEEETTEEEECSEEECTTCCHHHHHHHHTHHHHHHHHHTC
T ss_pred             CCCCCCCCeEEEEECCCCCcccc-cCCceEEEecCCCCCceEEecCcEEEcceEECCCCCHHHHHHhhccchhhHhhCCC
Confidence            55666789999999999998873 455566666542112222           3457789999999  899999999999


Q ss_pred             ceeEEeeee
Q psy5722          76 NDKEKRMTV   84 (86)
Q Consensus        76 NgTIf~~~~   84 (86)
                      |+||||||-
T Consensus        95 N~tifAYGQ  103 (344)
T 3dc4_A           95 QCTALAYGQ  103 (344)
T ss_dssp             CEEEEEESS
T ss_pred             ceEEEEecC
Confidence            999999984

>3t0q_A AGR253WP; kinesin, alpha and beta proteins, P-loop containing nucleosi triphosphate hydrolases, microtubule motor protein; HET: ADP; 2.35A {Ashbya gossypii}

Probab=99.75  E-value=5.6e-19  Score=132.53  Aligned_cols=73  Identities=19%  Similarity=0.199  Sum_probs=53.1

Q ss_pred             ccCCCeeEEEeecCCCchhhhcCCceeEecCCCCC-c--------------ceE----EeCCCCCccceee-hhhHHHHH
Q psy5722          12 AAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGE-E--------------NGL----SLGIGTASESSSE-HTKLIGDV   71 (86)
Q Consensus        12 ~~~~nIrV~vRvRPln~~E~~~g~~~~v~~~~~~~-~--------------~~v----~~~~~~tQ~~Vye-~~plV~~v   71 (86)
                      .+++||||+|||||+++.|...+...++....+.+ .              ..+    .|++..+|++||+ +.|+|+++
T Consensus         2 ~lkgnIrV~vRvRP~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~FD~Vf~~~~~Q~~vf~~v~~lv~~~   81 (349)
T 3t0q_A            2 ALRGNIRVYCRVRPPLLNEPQDMSHILIEKFNEAKGAQSLTINRNEGRILSYNFQFDMIFEPSHTNKEIFEEIRQLVQSS   81 (349)
T ss_dssp             ---CEEEEEEEECCCCTTSCCCCTTEEECCCBC--CBEEEEEEECC--CEEEEEEESEEECTTCCHHHHHHHHHHHHHGG
T ss_pred             CCCCCcEEEEEeCCCCccccccCceEEEeeccCCCCceEEEEcCCCCcccceeeecCEEECCCccHHHHHHHHHHHHHHH
Confidence            36799999999999999997765554443221100 0              112    3457789999999 88999999


Q ss_pred             HcccceeEEeeee
Q psy5722          72 ITGQNDKEKRMTV   84 (86)
Q Consensus        72 l~GYNgTIf~~~~   84 (86)
                      |+|||+||||||-
T Consensus        82 l~G~n~tifAYGq   94 (349)
T 3t0q_A           82 LDGYNVCIFAYGQ   94 (349)
T ss_dssp             GTTCEEEEEEECS
T ss_pred             HCCcceeEEEeCC
Confidence            9999999999984

>2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis}

Probab=99.75  E-value=5.4e-19  Score=132.89  Aligned_cols=71  Identities=21%  Similarity=0.289  Sum_probs=55.1

Q ss_pred             CCCeeEEEeecCCCchhhhcCCceeEecCCCC-------------------CcceE----EeCCCCCccceee--hhhHH
Q psy5722          14 EDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGG-------------------EENGL----SLGIGTASESSSE--HTKLI   68 (86)
Q Consensus        14 ~~nIrV~vRvRPln~~E~~~g~~~~v~~~~~~-------------------~~~~v----~~~~~~tQ~~Vye--~~plV   68 (86)
                      +++|||+||+||++++|...+...++.++.+.                   ....+    .|++..+|++||+  ++|||
T Consensus         3 ~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~v~v~~~~~~~~~~~~~~~~~~f~FD~Vf~~~~~Q~~Vy~~~~~plv   82 (350)
T 2vvg_A            3 SDNIKVIVRCRPLNARETRENALNIIRMDEASAQVIVDPPEQEKSATQAKKVPRTFTFDAVYDQTSCNYGIFQASFKPLI   82 (350)
T ss_dssp             -CBCEEEEEECCCCHHHHHTTCCBCEEEEGGGTEEEECC--------------EEEECSEEECTTCCHHHHHHHTTHHHH
T ss_pred             CCCeEEEEEeCCCChhhhccCCceEEEEcCCCCEEEEeeccccccccccCCCceEeeCCEEECCCcchhHHHHHHHHHHH
Confidence            47899999999999999887776665543310                   01122    2356779999999  89999


Q ss_pred             HHHHcccceeEEeeee
Q psy5722          69 GDVITGQNDKEKRMTV   84 (86)
Q Consensus        69 ~~vl~GYNgTIf~~~~   84 (86)
                      +++|+|||+||||||-
T Consensus        83 ~~~l~G~n~tifAYGq   98 (350)
T 2vvg_A           83 DAVLEGFNSTIFAYGQ   98 (350)
T ss_dssp             HHHHTTCCEEEEEECS
T ss_pred             HHHhCCCceeEEeecC
Confidence            9999999999999994

>2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa}

Probab=99.75  E-value=6.8e-19  Score=135.77  Aligned_cols=74  Identities=16%  Similarity=0.195  Sum_probs=57.0

Q ss_pred             cccCCCeeEEEeecCCCchhhhcCCceeEecCCCC-------------------------CcceEEeC----C-------
Q psy5722          11 IAAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGG-------------------------EENGLSLG----I-------   54 (86)
Q Consensus        11 ~~~~~nIrV~vRvRPln~~E~~~g~~~~v~~~~~~-------------------------~~~~v~~~----~-------   54 (86)
                      ...+++|||+||+||++++|++.+...++.++.+.                         +...+.|+    +       
T Consensus        34 ~~~~~~vrV~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~F~FD~vF~~~~~~~~~  113 (443)
T 2owm_A           34 KDPGANVRVVVRVRAFLPRELERNAECIVEMDPATERTSLLVPQETDFADARGARSRRVLEEKSFTFDKSFWSHNTEDEH  113 (443)
T ss_dssp             CCCCEECEEEEEEECCCHHHHHTTCCCCEEECSSSCEEEECCCC---------------CCCEEEECSEEEEESCTTSTT
T ss_pred             CCCCCCeEEEEEeCCCChHHhhcCCceEEEEcCCCccEEEecCCCcccccccccccccccCCceEecCeEeCCCCcCCcc
Confidence            34567999999999999999888877666654320                         01223332    1       


Q ss_pred             CCCccceee--hhhHHHHHHcccceeEEeeee
Q psy5722          55 GTASESSSE--HTKLIGDVITGQNDKEKRMTV   84 (86)
Q Consensus        55 ~~tQ~~Vye--~~plV~~vl~GYNgTIf~~~~   84 (86)
                      ..+|++||+  ++|||+++|+|||+||||||-
T Consensus       114 ~asQ~~Vy~~~~~plv~~~l~GyN~tIfAYGQ  145 (443)
T 2owm_A          114 YATQEHVYDSLGEEFLDHNFEGYHTCIFAYGQ  145 (443)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHTTCCEEEEEESS
T ss_pred             CCCHHHHHHhhhhhHHHHhhcCCceEEEEeCC
Confidence            368999999  899999999999999999984

>1v8k_A Kinesin-like protein KIF2C; microtubule destabilizer, structural P; HET: ANP; 2.25A {Mus musculus} SCOP: c.37.1.9 PDB: 1v8j_A* 2gry_A*

Probab=99.75  E-value=1.2e-18  Score=133.50  Aligned_cols=72  Identities=19%  Similarity=0.237  Sum_probs=57.3

Q ss_pred             cCCCeeEEEeecCCCchhhhcCCceeEecCCCC-----------C------cceE----EeCCCCCccceee--hhhHHH
Q psy5722          13 AEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGG-----------E------ENGL----SLGIGTASESSSE--HTKLIG   69 (86)
Q Consensus        13 ~~~nIrV~vRvRPln~~E~~~g~~~~v~~~~~~-----------~------~~~v----~~~~~~tQ~~Vye--~~plV~   69 (86)
                      .+++|+|+||+||++++|...++..++.++.+.           +      ...+    .|++..+|++||+  ++|||+
T Consensus        69 ~~~~I~V~vRvRPl~~~E~~~~~~~~v~~~~~~~v~v~~~~~~~~~~~~~~~~~F~FD~VF~~~~tQ~~Vy~~~~~plV~  148 (410)
T 1v8k_A           69 EEHRICVCVRKRPLNKQELAKKEIDVISVPSKCLLLVHEPKLKVDLTKYLENQAFCFDFAFDETASNEVVYRFTARPLVQ  148 (410)
T ss_dssp             SCCCEEEEEEECCCCHHHHHTTCCBCEECCSSSEEEEEEEEECTTCCEEEEEEEEECSEEECTTCCHHHHHHHTTHHHHH
T ss_pred             CCCCeEEEEEeCCCChhHhhcCCccEEEECCCCEEEEecCcccccccccccceEEeeeEEEecCCChhhhhHHHHHHHHH
Confidence            368999999999999999888776666665420           0      0112    3457789999999  899999


Q ss_pred             HHHcccceeEEeeee
Q psy5722          70 DVITGQNDKEKRMTV   84 (86)
Q Consensus        70 ~vl~GYNgTIf~~~~   84 (86)
                      ++|+|||+||||||-
T Consensus       149 ~~l~G~N~tifAYGQ  163 (410)
T 1v8k_A          149 TIFEGGKATCFAYGQ  163 (410)
T ss_dssp             HHHTTCEEEEEEEES
T ss_pred             HHhcCCceeEEeecC
Confidence            999999999999994

>3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A*

Probab=99.74  E-value=1.7e-18  Score=131.01  Aligned_cols=73  Identities=19%  Similarity=0.217  Sum_probs=54.3

Q ss_pred             ccCCCeeEEEeecCCCchhhhcCCceeEecCC---------CCCcceE----EeCCCCCccceee-hhhHHHHHHcccce
Q psy5722          12 AAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPS---------GGEENGL----SLGIGTASESSSE-HTKLIGDVITGQND   77 (86)
Q Consensus        12 ~~~~nIrV~vRvRPln~~E~~~g~~~~v~~~~---------~~~~~~v----~~~~~~tQ~~Vye-~~plV~~vl~GYNg   77 (86)
                      +++++|||+||+||++++|...+...++....         +.+...+    .|++..+|++||+ ++|||+++|+|||+
T Consensus         2 e~~~~i~V~vRvRP~~~~E~~~~~~~~~~~~~~~~v~~~~~~~~~~~f~FD~Vf~~~~~Q~~Vy~~~~~lv~~~l~G~n~   81 (369)
T 3cob_A            2 DMKGKIRVYCRLRPLCEKEIIAKERNAIRSVDEFTVEHLWKDDKAKQHMYDRVFDGNATQDDVFEDTKYLVQSAVDGYNV   81 (369)
T ss_dssp             --CCBCEEEEEECCCCHHHHHTTCCBCEEECSSSEEEEECTTSCEEEEECSEEECTTCCHHHHHHTTTHHHHHHHTTCEE
T ss_pred             CCCCCeEEEEECCCCChhhccCCCcEEEEcCCcEEEEecCCCCCceEEecCEEECCCCCcceehhhhhhhhHhhhcCCce
Confidence            46799999999999999998766543322211         0001223    3467889999999 99999999999999


Q ss_pred             eEEeeee
Q psy5722          78 KEKRMTV   84 (86)
Q Consensus        78 TIf~~~~   84 (86)
                      ||||||-
T Consensus        82 tifAYGq   88 (369)
T 3cob_A           82 CIFAYGQ   88 (369)
T ss_dssp             EEEEEEC
T ss_pred             EEEEECC
Confidence            9999994

>2h58_A Kinesin-like protein KIFC3 variant; motor domain, ADP, structural genomics, structur Al genomics consortium, SGC; HET: ADP; 1.85A {Homo sapiens}

Probab=99.74  E-value=1.5e-18  Score=129.48  Aligned_cols=72  Identities=17%  Similarity=0.241  Sum_probs=52.3

Q ss_pred             cCCCeeEEEeecCCCchhhhcCC-ceeEecCCCCC----------cceE----EeCCCCCccceee-hhhHHHHHHcccc
Q psy5722          13 AEDSIRVVCRFRPLNHSEEKAGS-KFIVKFPSGGE----------ENGL----SLGIGTASESSSE-HTKLIGDVITGQN   76 (86)
Q Consensus        13 ~~~nIrV~vRvRPln~~E~~~g~-~~~v~~~~~~~----------~~~v----~~~~~~tQ~~Vye-~~plV~~vl~GYN   76 (86)
                      ++++|||+||+||++++|...+. ..++.++.+.+          ...+    .|++..+|++||+ ++|+|+++|+|||
T Consensus         2 ~~~~i~V~vRvRP~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~FD~Vf~~~~~Q~~Vy~~v~~lv~~~l~G~n   81 (330)
T 2h58_A            2 SKGNIRVIARVRPVTKEDGEGPEATNAVTFDADDDSIIHLLHKGKPVSFELDKVFSPQASQQDVFQEVQALVTSCIDGFN   81 (330)
T ss_dssp             ---CEEEEEEECCCCGGGCSSGGGSBCEEECSSCTTEEEEEETTEEEEEECSEEECTTCCHHHHHTTTHHHHHHHHTTCC
T ss_pred             CCCCEEEEEEcCCCChhhcccCCCccEEEEeCCCCcEEEEcCCCCeeEEecCeEeCCCCCcHhHHHHHHHHHHHHhCCCE
Confidence            57899999999999999865432 23444543210          1112    3457889999999 9999999999999


Q ss_pred             eeEEeeee
Q psy5722          77 DKEKRMTV   84 (86)
Q Consensus        77 gTIf~~~~   84 (86)
                      +||||||-
T Consensus        82 ~tifAYGq   89 (330)
T 2h58_A           82 VCIFAYGQ   89 (330)
T ss_dssp             EEEEEESS
T ss_pred             EEEEeECC
Confidence            99999984

>2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C*

Probab=99.72  E-value=2.8e-18  Score=129.54  Aligned_cols=71  Identities=18%  Similarity=0.232  Sum_probs=54.0

Q ss_pred             CCCeeEEEeecCCCchhhhcCCceeEecCCC-----------CCcceEEe----CCC--------CCccceee--hhhHH
Q psy5722          14 EDSIRVVCRFRPLNHSEEKAGSKFIVKFPSG-----------GEENGLSL----GIG--------TASESSSE--HTKLI   68 (86)
Q Consensus        14 ~~nIrV~vRvRPln~~E~~~g~~~~v~~~~~-----------~~~~~v~~----~~~--------~tQ~~Vye--~~plV   68 (86)
                      ..+|||+||+||++++|...+...++.++.+           .....+.|    ++.        .+|++||+  ++|||
T Consensus         3 ~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~i~~~~~~~~~~~~f~FD~vf~~~~~~~~~~~asQ~~Vy~~~~~plv   82 (366)
T 2zfi_A            3 GASVKVAVRVRPFNSREMSRDSKCIIQMSGSTTTIVNPKQPKETPKSFSFDYSYWSHTSPEDINYASQKQVYRDIGEEML   82 (366)
T ss_dssp             -CCEEEEEEECCCCHHHHHTTCCBCEEEETTEEEECCTTCTTSCCEEEECSEEEECSSCTTSSSCCCHHHHHHHTHHHHH
T ss_pred             CCCcEEEEECCCCChhhccCCCCeEEEECCCcEEEeccCCCCCCceEEecceEeecCccccccccCcHHHHHHHHHHHHH
Confidence            3689999999999999988777666554432           00122333    233        68999999  89999


Q ss_pred             HHHHcccceeEEeeee
Q psy5722          69 GDVITGQNDKEKRMTV   84 (86)
Q Consensus        69 ~~vl~GYNgTIf~~~~   84 (86)
                      +++|+|||+||||||-
T Consensus        83 ~~~l~G~N~tifAYGq   98 (366)
T 2zfi_A           83 QHAFEGYNVCIFAYGQ   98 (366)
T ss_dssp             HHHHTTCCEEEEEECS
T ss_pred             HHHhcCCeeEEEEeCC
Confidence            9999999999999984

>3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens}

Probab=99.72  E-value=1.7e-18  Score=131.84  Aligned_cols=74  Identities=16%  Similarity=0.165  Sum_probs=46.7

Q ss_pred             cccCCCeeEEEeecCCCchhhhcCCceeEecCCC-----------CCcceE----EeCCCCCccceee--hhhHHHHHHc
Q psy5722          11 IAAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSG-----------GEENGL----SLGIGTASESSSE--HTKLIGDVIT   73 (86)
Q Consensus        11 ~~~~~nIrV~vRvRPln~~E~~~g~~~~v~~~~~-----------~~~~~v----~~~~~~tQ~~Vye--~~plV~~vl~   73 (86)
                      .+.+++|+|+||+||++++|...+...++....+           .+...+    .|++..+|++||+  ++|||+++|+
T Consensus        17 ~~~~~~irV~vRvRP~~~~E~~~~~~~~v~~~~~~~~~i~~~~~~~~~~~f~FD~Vf~~~~tQ~~Vy~~~~~plv~~~l~   96 (388)
T 3bfn_A           17 QGPPARVRVAVRLRPFVDGTAGASDPPCVRGMDSCSLEIANWRNHQETLKYQFDAFYGERSTQQDIYAGSVQPILRHLLE   96 (388)
T ss_dssp             SSCCCCCEEEEEECCCC-----------------------------CEEEEECSEEECTTCCHHHHHHHHTGGGHHHHTT
T ss_pred             cCCCCCEEEEEECCCCChhhhccCCCceEEecCCCeEEEecCCCCCCeeEEEcceEecCCCCHhHHHHHHHHHHHHHhhc
Confidence            3456899999999999999976655544432111           001123    3457789999999  9999999999


Q ss_pred             ccceeEEeeee
Q psy5722          74 GQNDKEKRMTV   84 (86)
Q Consensus        74 GYNgTIf~~~~   84 (86)
                      |||+||||||-
T Consensus        97 G~N~tifAYGq  107 (388)
T 3bfn_A           97 GQNASVLAYGP  107 (388)
T ss_dssp             TCCEEEEEESC
T ss_pred             CceeeEeeecC
Confidence            99999999984

>3gbj_A KIF13B protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, ATP-binding, microtubule, motor protein; HET: ADP; 2.10A {Homo sapiens} SCOP: c.37.1.9

Probab=99.72  E-value=3.7e-18  Score=128.38  Aligned_cols=69  Identities=14%  Similarity=0.221  Sum_probs=52.6

Q ss_pred             CeeEEEeecCCCchhhhcCCceeEecCCCC-----------------CcceEEeC------------CCCCccceee--h
Q psy5722          16 SIRVVCRFRPLNHSEEKAGSKFIVKFPSGG-----------------EENGLSLG------------IGTASESSSE--H   64 (86)
Q Consensus        16 nIrV~vRvRPln~~E~~~g~~~~v~~~~~~-----------------~~~~v~~~------------~~~tQ~~Vye--~   64 (86)
                      +|||+||+||++++|...+...++.++.+.                 ....+.|+            ...+|++||+  +
T Consensus         2 ~VkV~vRvRPl~~~E~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~k~F~FD~vF~~~d~~~~~~~a~Q~~vy~~~~   81 (354)
T 3gbj_A            2 KVKVAVRIRPMNRRETDLHTKCVVDVDANKVILNPVNTNLSKGDARGQPKVFAYDHCFWSMDESVKEKYAGQDIVFKCLG   81 (354)
T ss_dssp             CEEEEEEECCCCHHHHHHTCCBCEEEETTEEEECCC-----------CCEEEECSEEEECSCTTCTTTBCCHHHHHHHHH
T ss_pred             CcEEEEECCCCChhhhccCCceEEEeCCCeEEEeCCccccccccccCCceEEEeeEEeccCccccccccccHHHHHHHhh
Confidence            799999999999999887776665544310                 01122221            2358999999  8


Q ss_pred             hhHHHHHHcccceeEEeeee
Q psy5722          65 TKLIGDVITGQNDKEKRMTV   84 (86)
Q Consensus        65 ~plV~~vl~GYNgTIf~~~~   84 (86)
                      +|||+++|+|||+||||||-
T Consensus        82 ~~lv~~~l~G~n~tifAYGq  101 (354)
T 3gbj_A           82 ENILQNAFDGYNACIFAYGQ  101 (354)
T ss_dssp             HHHHHHHHTTCCEEEEEEEC
T ss_pred             HHHHHHHhCCceeEEEeeCC
Confidence            99999999999999999995

>3nwn_A Kinesin-like protein KIF9; motor domain, ADP, structural genomics, structural consortium, SGC, contractIle protein; HET: ADP; 2.00A {Homo sapiens}

Probab=99.71  E-value=5.2e-18  Score=127.92  Aligned_cols=73  Identities=10%  Similarity=0.164  Sum_probs=49.1

Q ss_pred             ccCCCeeEEEeecCCCchhhhc----CCcee--EecCCCC---------CcceEEeC---CCCCccceee--hhhHHHHH
Q psy5722          12 AAEDSIRVVCRFRPLNHSEEKA----GSKFI--VKFPSGG---------EENGLSLG---IGTASESSSE--HTKLIGDV   71 (86)
Q Consensus        12 ~~~~nIrV~vRvRPln~~E~~~----g~~~~--v~~~~~~---------~~~~v~~~---~~~tQ~~Vye--~~plV~~v   71 (86)
                      ..+++|||+||+||+++.|.+.    .+...  +..+.+.         ....+.|+   ++.+|++||+  ++|||+++
T Consensus        21 ~~~~~i~V~vRvRP~~~~e~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~F~FD~Vf~~~sQ~~Vy~~~~~plv~~~  100 (359)
T 3nwn_A           21 GTRKKVHAFVRVKPTDDFAHEMIRYGDDKRSIDIHLKKDIRRGVVNNQQTDWSFKLDGVLHDASQDLVYETVAKDVVSQA  100 (359)
T ss_dssp             ---CCEEEEEEECCCSSCCTTTEEECTTSSEEEEECCCCSSHHHHTTSCCEEEEECSEEEESCCHHHHHHHHTHHHHHHH
T ss_pred             CCCCCEEEEEEcCCCCcccccceeecCCCcEEEEecCCccccccccCCcCceEeecCccCCCCCHHHHHHHHHHHHHHHH
Confidence            4568999999999999877531    12222  2222210         01123332   3579999999  89999999


Q ss_pred             HcccceeEEeeee
Q psy5722          72 ITGQNDKEKRMTV   84 (86)
Q Consensus        72 l~GYNgTIf~~~~   84 (86)
                      |+|||+||||||-
T Consensus       101 l~G~N~tifAYGQ  113 (359)
T 3nwn_A          101 LDGYNGTIMCYGQ  113 (359)
T ss_dssp             HTTCCEEEEEEES
T ss_pred             hCCCCEEEEEeCC
Confidence            9999999999984

>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*

Probab=99.71  E-value=6.8e-18  Score=129.24  Aligned_cols=73  Identities=23%  Similarity=0.197  Sum_probs=53.0

Q ss_pred             ccCCCeeEEEeecCCCchhhhcCCceeE-------ecCC-CC------CcceE----EeCCCCCccceee-hhhHHHHHH
Q psy5722          12 AAEDSIRVVCRFRPLNHSEEKAGSKFIV-------KFPS-GG------EENGL----SLGIGTASESSSE-HTKLIGDVI   72 (86)
Q Consensus        12 ~~~~nIrV~vRvRPln~~E~~~g~~~~v-------~~~~-~~------~~~~v----~~~~~~tQ~~Vye-~~plV~~vl   72 (86)
                      ++++||||+||+||+++.|...+...+.       .+.. +.      ....+    .|++..+|++||+ +.|||+++|
T Consensus        56 ~l~gnIrV~vRvRP~~~~E~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~F~FD~VF~~~~~Q~~Vf~~v~plv~~~l  135 (412)
T 3u06_A           56 DLRDNIRVFCRIRPPLESEENRMCCTWTYHDESTVELQSIDAQAKSKMGQQIFSFDQVFHPLSSQSDIFEMVSPLIQSAL  135 (412)
T ss_dssp             HHTCSEEEEEEECCCCGGGTTSCBCEEEEEETTEEEEECCC-------CCCEEECSEEECTTCCHHHHHTTTHHHHHHHH
T ss_pred             HhCCCEEEEEEcCCCCchhccCcceEEEecCCCEEEEecCCcccccccCceEEeeCeEcCCCCCHHHHHHHHHHHHHHHH
Confidence            4679999999999999998654432111       1110 00      01223    3467789999999 889999999


Q ss_pred             cccceeEEeeee
Q psy5722          73 TGQNDKEKRMTV   84 (86)
Q Consensus        73 ~GYNgTIf~~~~   84 (86)
                      +|||+||||||-
T Consensus       136 ~G~n~tifAYGq  147 (412)
T 3u06_A          136 DGYNICIFAYGQ  147 (412)
T ss_dssp             TTCCEEEEEESS
T ss_pred             CCCceEEEEecC
Confidence            999999999985

>2rep_A Kinesin-like protein KIFC1; structural genomics consortium, motor domain, ADP, binding, cell cycle, cell division, endosome, microtubule; HET: ADP; 2.60A {Homo sapiens}

Probab=99.70  E-value=5.5e-18  Score=128.49  Aligned_cols=73  Identities=16%  Similarity=0.236  Sum_probs=49.9

Q ss_pred             ccCCCeeEEEeecCCCchhhhcCCce---------------eEecCC-C------------CCcceE----EeCCCCCcc
Q psy5722          12 AAEDSIRVVCRFRPLNHSEEKAGSKF---------------IVKFPS-G------------GEENGL----SLGIGTASE   59 (86)
Q Consensus        12 ~~~~nIrV~vRvRPln~~E~~~g~~~---------------~v~~~~-~------------~~~~~v----~~~~~~tQ~   59 (86)
                      .++++|||+||+||++++|...+...               .+.+.. +            .....+    .|++..+|+
T Consensus        19 ~~~~~irV~vRvRP~~~~E~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~F~FD~Vf~~~~~Q~   98 (376)
T 2rep_A           19 SLKGNIRVFCRVRPVLPGEPTPPPGLLLFPSGPGGPSDPPTRLSLSRSDERRGTLSGAPAPPPRHDFSFDRVFPPGSGQD   98 (376)
T ss_dssp             ----CEEEEEEECCCCTTSCCCCGGGSBCCC------CCCCEEECCC-----------------CEEECSEEECTTCCHH
T ss_pred             ccCCCeEEEEEcCCCChhhcccCCceEEEccCcccccCCCcEEEEecCCccccccccccCCCCceeeeecEEcCCcccch
Confidence            56789999999999999997654221               111111 0            001123    345778999


Q ss_pred             ceee-hhhHHHHHHcccceeEEeeee
Q psy5722          60 SSSE-HTKLIGDVITGQNDKEKRMTV   84 (86)
Q Consensus        60 ~Vye-~~plV~~vl~GYNgTIf~~~~   84 (86)
                      +||+ +.|||+++|+|||+||||||-
T Consensus        99 ~Vy~~v~~lv~~~l~G~N~tifAYGq  124 (376)
T 2rep_A           99 EVFEEIAMLVQSALDGYPVCIFAYGQ  124 (376)
T ss_dssp             HHHHHHHHHHHGGGGTCCEEEEEECS
T ss_pred             hhhhhHHHHHHHhcCCCceEEEEeCC
Confidence            9999 889999999999999999984

>1ry6_A Internal kinesin; kinesin motor domain, nucleotide-free, transport protein; 1.60A {Plasmodium falciparum} SCOP: c.37.1.9

Probab=99.68  E-value=1.7e-17  Score=125.12  Aligned_cols=69  Identities=23%  Similarity=0.170  Sum_probs=54.0

Q ss_pred             CeeEEEeecCCCchhhhcCCceeEecCCCC-----------------CcceE----EeCCCCCccceee--hhhHHHHHH
Q psy5722          16 SIRVVCRFRPLNHSEEKAGSKFIVKFPSGG-----------------EENGL----SLGIGTASESSSE--HTKLIGDVI   72 (86)
Q Consensus        16 nIrV~vRvRPln~~E~~~g~~~~v~~~~~~-----------------~~~~v----~~~~~~tQ~~Vye--~~plV~~vl   72 (86)
                      +|||+||+||++++|...+...++.+.++.                 +...+    .|++..+|++||+  ++|||+++|
T Consensus         1 ~IrV~vRvRP~~~~E~~~~~~~~v~~~~~~~i~i~~~~~~~~~~~~~~~~~F~FD~Vf~~~~~Q~~Vy~~~~~plv~~~~   80 (360)
T 1ry6_A            1 MIKVVVRKRPLSELEKKKKDSDIITVKNNCTLYIDEPRYKVDMTKYIERHEFIVDKVFDDTVDNFTVYENTIKPLIIDLY   80 (360)
T ss_dssp             CEEEEEEECCCCHHHHHTTCCBCEEEEETTEEEEEEEEEETTTEEEEEEEEEECSEEECTTCCHHHHHHHHTHHHHHHHH
T ss_pred             CeEEEEECCCCChHHhccCCceEEEECCCCEEEEeCCccccccccccccceEEeeeEecCCCCHHHHHHHHhhhhhhhhc
Confidence            699999999999999887776665554320                 00112    3457789999999  999999999


Q ss_pred             c-ccceeEEeeee
Q psy5722          73 T-GQNDKEKRMTV   84 (86)
Q Consensus        73 ~-GYNgTIf~~~~   84 (86)
                      + ||||||||||-
T Consensus        81 ~~G~n~tifAYGq   93 (360)
T 1ry6_A           81 ENGCVCSCFAYGQ   93 (360)
T ss_dssp             HHCCEEEEEEECC
T ss_pred             cCCceeEEEeeCC
Confidence            6 99999999984

>1f9v_A Kinesin-like protein KAR3; kinesin-related protein, motor protein, microtubinding proteinbule, contractIle protein; HET: ADP; 1.30A {Saccharomyces cerevisiae} SCOP: c.37.1.9 PDB: 1f9t_A* 1f9w_A* 1f9u_A* 3kar_A*

Probab=99.67  E-value=2e-17  Score=124.08  Aligned_cols=70  Identities=16%  Similarity=0.204  Sum_probs=48.3

Q ss_pred             cCCCeeEEEeecCCCc-hhhhcCCceeEecCC---C--------------CCcceE----EeCCCCCccceee-hhhHHH
Q psy5722          13 AEDSIRVVCRFRPLNH-SEEKAGSKFIVKFPS---G--------------GEENGL----SLGIGTASESSSE-HTKLIG   69 (86)
Q Consensus        13 ~~~nIrV~vRvRPln~-~E~~~g~~~~v~~~~---~--------------~~~~~v----~~~~~~tQ~~Vye-~~plV~   69 (86)
                      +++||||+||+||+++ .|..  +..++.+..   +              .....+    .|++..+|++||+ +.|||+
T Consensus         1 lk~nIrV~vRvRP~~~~~e~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~f~FD~Vf~~~~~Q~~Vy~~v~~lv~   78 (347)
T 1f9v_A            1 MRGNIRVYCRIRPALKNLENS--DTSLINVNEFDDNSGVQSMEVTKIQNTAQVHEFKFDKIFDQQDTNVDVFKEVGQLVQ   78 (347)
T ss_dssp             --CEEEEEEEECCCCTTTCCC--TTEEEEECCCBTTTTBEEEEEEEGGGTTCEEEEEESEEECTTCCHHHHHHHHHHHHG
T ss_pred             CCCCeEEEEEeCCCCcccccC--CCceEEEecccCCCCceEEEEecCCCCcCceEEeeCEEECCCCCHHHHHHHHHHHHH
Confidence            4689999999999998 4422  222222211   0              001122    3457789999999 889999


Q ss_pred             HHHcccceeEEeeee
Q psy5722          70 DVITGQNDKEKRMTV   84 (86)
Q Consensus        70 ~vl~GYNgTIf~~~~   84 (86)
                      ++|+|||+||||||-
T Consensus        79 ~~l~G~n~tifAYGq   93 (347)
T 1f9v_A           79 SSLDGYNVCIFAYGQ   93 (347)
T ss_dssp             GGGGTCCEEEEEECC
T ss_pred             HhcCCceeEEEEECC
Confidence            999999999999994

>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}

Probab=99.67  E-value=3e-17  Score=125.14  Aligned_cols=73  Identities=16%  Similarity=0.110  Sum_probs=50.9

Q ss_pred             ccCCCeeEEEeecCCCchhh-hcCCceeEec-CCC--------------CCcceE----EeCCCCCccceee-hhhHHHH
Q psy5722          12 AAEDSIRVVCRFRPLNHSEE-KAGSKFIVKF-PSG--------------GEENGL----SLGIGTASESSSE-HTKLIGD   70 (86)
Q Consensus        12 ~~~~nIrV~vRvRPln~~E~-~~g~~~~v~~-~~~--------------~~~~~v----~~~~~~tQ~~Vye-~~plV~~   70 (86)
                      ++++||||+||+||+.+.|. .......+.. +.+              .....+    .|++..+|++||+ +.|||++
T Consensus        56 elkgnIrV~vRvRP~~~~~e~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~F~FD~VF~~~~~Q~~Vf~~v~~lv~~  135 (403)
T 4etp_A           56 ELRGNIRVYLRIRPALKNLENSDTSLINVNEFDDNSGVQSMEVTKIQNTAQVHEFKFDKIFDQQDTNVDVFKEVGQLVQS  135 (403)
T ss_dssp             HHHCSEEEEEEECCCCTTTSCSCCTTEEECCCBTTTTBEEEEEEECSSSCEEEEEEESEEECTTCCHHHHHHHHHHHHHH
T ss_pred             HcCCCeEEEEEeCCCCCcccccCCCeeEEeeccCCCCceEEEEecCCCCcCceEEEcCEEECCCCchHHHHHHHHHHHHH
Confidence            46799999999999987732 2222222211 110              000122    3467889999999 8899999


Q ss_pred             HHcccceeEEeeee
Q psy5722          71 VITGQNDKEKRMTV   84 (86)
Q Consensus        71 vl~GYNgTIf~~~~   84 (86)
                      +|+|||+||||||-
T Consensus       136 ~l~G~N~tifAYGq  149 (403)
T 4etp_A          136 SLDGYNVAIFAYGQ  149 (403)
T ss_dssp             HHTTCCEEEEEESC
T ss_pred             HhCCcceEEEEECC
Confidence            99999999999994

>4h1g_A Maltose binding protein-cakar3 motor domain fusio; kinesin motor domain, motor protein, chimera; HET: MTT ADP EDO; 2.15A {Escherichia coli}

Probab=99.47  E-value=3.3e-14  Score=113.53  Aligned_cols=73  Identities=21%  Similarity=0.226  Sum_probs=44.7

Q ss_pred             ccCCCeeEEEeec----CCCchhhhcCCce-eEecCCCCC---cceE-------------------EeCCCCCccceee-
Q psy5722          12 AAEDSIRVVCRFR----PLNHSEEKAGSKF-IVKFPSGGE---ENGL-------------------SLGIGTASESSSE-   63 (86)
Q Consensus        12 ~~~~nIrV~vRvR----Pln~~E~~~g~~~-~v~~~~~~~---~~~v-------------------~~~~~~tQ~~Vye-   63 (86)
                      ..-+++|||||+|    |....|...|... .+..+.+.+   ..++                   .|++..+|++||+ 
T Consensus       371 ~il~~~rV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~fd~vf~~~~~q~~v~~~  450 (715)
T 4h1g_A          371 ALKGNIRVFCRIRNVSSSSSSSSSSSSEDIIQYEAPQDINDESKQELVITRNINNNFSNLRFLFDKIFEREQSNDLVFEE  450 (715)
T ss_dssp             SSSCSEEEEEEECCCC-------------BCEEECCC-------CEEEEEEEETTEEEEEEEECSEEECSSCCHHHHGGG
T ss_pred             HHHhcCeEEEEEeccccccccccccccccceeccCCCCCCCCCCCeEEEcCCCCCCCCCeEEEeceEeCCCCCHHHHHHH
Confidence            3456899999999    5555555555443 444443211   1222                   2356779999999 


Q ss_pred             hhhHHHHHHcccceeEEeeee
Q psy5722          64 HTKLIGDVITGQNDKEKRMTV   84 (86)
Q Consensus        64 ~~plV~~vl~GYNgTIf~~~~   84 (86)
                      +.|||+++|+||||||||||-
T Consensus       451 ~~~~v~~~~~G~n~~i~ayGq  471 (715)
T 4h1g_A          451 LSQLIQCSLDGTNVCVFAYGQ  471 (715)
T ss_dssp             THHHHHHHHTTCCEEEEEESS
T ss_pred             HHHHHHHHhCCceEEEEccCC
Confidence            889999999999999999984

>2o0a_A S.cerevisiae chromosome XVI reading frame ORF YPL253C; VIK1, motor homology domain, kinesin, motor domain, microtubule-binding; 1.60A {Saccharomyces cerevisiae}

Probab=99.36  E-value=3.5e-13  Score=99.79  Aligned_cols=70  Identities=10%  Similarity=-0.014  Sum_probs=49.8

Q ss_pred             cccCCCeeEEEeecCCC-chh--hhcCCceeEecCCCCCcceE----EeCCCCCcc--ceee-hhhHHHHHHc-ccceeE
Q psy5722          11 IAAEDSIRVVCRFRPLN-HSE--EKAGSKFIVKFPSGGEENGL----SLGIGTASE--SSSE-HTKLIGDVIT-GQNDKE   79 (86)
Q Consensus        11 ~~~~~nIrV~vRvRPln-~~E--~~~g~~~~v~~~~~~~~~~v----~~~~~~tQ~--~Vye-~~plV~~vl~-GYNgTI   79 (86)
                      .+++|+|||+||+||.. ..+  ..-.... +.+..+  ....    .|.+..+|+  +||+ ..++|++||+ |||+||
T Consensus        20 ~ELKGnIRVFcrvrp~~~p~~~~v~y~~~~-I~v~~~--~k~f~FDRVf~p~s~Qe~~~vf~E~~~~i~scLd~GyNvcI   96 (298)
T 2o0a_A           20 IEQKGTMRCYAYVMEQNLPENLLFDYENGV-ITQGLS--EHVYKFNRVIPHLKVSEDKFFTQEYSVYHDMCLNQKKNFNL   96 (298)
T ss_dssp             HHHHTCCEEEEEECGGGSCTTEEEETTTTE-EEETTT--CCEEECSEEEETTTSCHHHHHHHTTHHHHHHHHHTTCCEEE
T ss_pred             HHhhCceEEEEEeccccCCccceeecCccc-eeecCC--CceEEeeeEECccccccHHHHHHHHHHHHHHHHhCCCceEE
Confidence            34779999999999965 311  1111111 222222  2334    445888999  9999 9999999999 999999


Q ss_pred             Eeee
Q psy5722          80 KRMT   83 (86)
Q Consensus        80 f~~~   83 (86)
                      |+||
T Consensus        97 fSyG  100 (298)
T 2o0a_A           97 ISLS  100 (298)
T ss_dssp             EEEC
T ss_pred             EEEC
Confidence            9998

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	86
d1bg2a_	323	c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId	8e-08
d1goja_	354	c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5	3e-07
d2zfia1	349	c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus),	8e-07
d1v8ka_	362	c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c	8e-07
d1x88a1	345	c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens),	4e-06
d1ry6a_	330	c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodiu	8e-06
d1f9va_	342	c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjun	3e-05
d1sdma_	364	c.37.1.9 (A:) Kinesin heavy chain-like protein {Po	1e-04
d2ncda_	368	c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjun	2e-04

>d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]} Length = 323

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.7 bits (107), Expect = 8e-08
 Identities = 18/31 (58%), Positives = 22/31 (70%)

Query: 13 AEDSIRVVCRFRPLNHSEEKAGSKFIVKFPS 43
          AE +I+V+CRFRPLN SE   G K+I KF  
Sbjct: 3  AECNIKVMCRFRPLNESEVNRGDKYIAKFQG 33

>d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]} Length = 354

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin
species: Neurospora crassa [TaxId: 5141]

 Score = 44.2 bits (103), Expect = 3e-07
 Identities = 14/32 (43%), Positives = 21/32 (65%)

Query: 12 AAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPS 43
          ++ +SI+VV RFRP N  E ++G + IV F  
Sbjct: 2  SSANSIKVVARFRPQNRVEIESGGQPIVTFQG 33

>d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]} Length = 349

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin
species: Mouse (Mus musculus), kif1a [TaxId: 10090]

 Score = 42.7 bits (99), Expect = 8e-07
 Identities = 10/29 (34%), Positives = 14/29 (48%)

Query: 16 SIRVVCRFRPLNHSEEKAGSKFIVKFPSG 44
          S++V  R RP N  E    SK I++    
Sbjct: 2  SVKVAVRVRPFNSREMSRDSKCIIQMSGS 30

>d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]} Length = 362

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin
species: Mouse (Mus musculus), kif2c [TaxId: 10090]

 Score = 42.6 bits (99), Expect = 8e-07
 Identities = 12/43 (27%), Positives = 16/43 (37%)

Query: 1  MSNNAPADREIAAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPS 43
          M  +     +   E  I V  R RPLN  E       ++  PS
Sbjct: 16 MECSPLTVTDPIEEHRICVCVRKRPLNKQELAKKEIDVISVPS 58

>d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin
species: Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]

 Score = 40.7 bits (94), Expect = 4e-06
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)

Query: 17 IRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLSLGIGTASESSSEHT 65
          I+VV R RP N +E KA +  IV+         +S+  G  ++ SS  T
Sbjct: 2  IQVVVRCRPFNLAERKASAHSIVECD--PVRKEVSVRTGGLADKSSRKT 48

>d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 330

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 40.0 bits (92), Expect = 8e-06
 Identities = 10/30 (33%), Positives = 15/30 (50%)

Query: 17 IRVVCRFRPLNHSEEKAGSKFIVKFPSGGE 46
          I+VV R RPL+  E+K     I+   +   
Sbjct: 2  IKVVVRKRPLSELEKKKKDSDIITVKNNCT 31

>d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]} Length = 342

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin motor Ncd (non-claret disjunctional)
species: Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]

 Score = 38.1 bits (87), Expect = 3e-05
 Identities = 11/50 (22%), Positives = 19/50 (38%)

Query: 16 SIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGLSLGIGTASESSSEHT 65
          +IRV CR RP   + E + +  I            S+ +     ++  H 
Sbjct: 2  NIRVYCRIRPALKNLENSDTSLINVNEFDDNSGVQSMEVTKIQNTAQVHE 51

>d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]} Length = 364

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin heavy chain-like protein
species: Potato (Solanum tuberosum) [TaxId: 4113]

 Score = 36.5 bits (83), Expect = 1e-04
 Identities = 10/27 (37%), Positives = 13/27 (48%)

Query: 17 IRVVCRFRPLNHSEEKAGSKFIVKFPS 43
          IRV CR RPL   E  A  +  ++   
Sbjct: 2  IRVYCRLRPLCEKEIIAKERNAIRSVD 28

>d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 368

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin motor Ncd (non-claret disjunctional)
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 35.7 bits (81), Expect = 2e-04
 Identities = 10/23 (43%), Positives = 10/23 (43%)

Query: 17 IRVVCRFRPLNHSEEKAGSKFIV 39
          IRV CR RP   SEE        
Sbjct: 47 IRVFCRIRPPLESEENRMCCTWT 69

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	86
d1bg2a_	323	Kinesin {Human (Homo sapiens) [TaxId: 9606]}	99.74
d1v8ka_	362	Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090	99.73
d1goja_	354	Kinesin {Neurospora crassa [TaxId: 5141]}	99.7
d2ncda_	368	Kinesin motor Ncd (non-claret disjunctional) {Frui	99.69
d1x88a1	345	Kinesin {Human (Homo sapiens), mitotic kinesin eg5	99.69
d2zfia1	349	Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090	99.64
d1sdma_	364	Kinesin heavy chain-like protein {Potato (Solanum	99.63
d1ry6a_	330	Kinesin {Malaria parasite (Plasmodium falciparum)	99.59
d1f9va_	342	Kinesin motor Ncd (non-claret disjunctional) {Bake	99.57

>d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=4.3e-19  Score=128.65  Aligned_cols=69  Identities=36%  Similarity=0.566  Sum_probs=58.8

Q ss_pred             cCCCeeEEEeecCCCchhhhcCCceeEecCCCCCcceE-----------EeCCCCCccceee--hhhHHHHHHcccceeE
Q psy5722          13 AEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGL-----------SLGIGTASESSSE--HTKLIGDVITGQNDKE   79 (86)
Q Consensus        13 ~~~nIrV~vRvRPln~~E~~~g~~~~v~~~~~~~~~~v-----------~~~~~~tQ~~Vye--~~plV~~vl~GYNgTI   79 (86)
                      .+|||||+||+||+++.|...++..++.+.++   .++           .|++..+|++||+  ++|||+++|+|||+||
T Consensus         3 ~~~NI~V~vRvRP~~~~e~~~~~~~~~~~~~~---~~~~~~~~~f~FD~vf~~~~~q~~vf~~~~~~lv~~~l~G~n~~i   79 (323)
T d1bg2a_           3 AECNIKVMCRFRPLNESEVNRGDKYIAKFQGE---DTVVIASKPYAFDRVFQSSTSQEQVYNDCAKKIVKDVLEGYNGTI   79 (323)
T ss_dssp             SSCEEEEEEEECCCCHHHHHHTCCBCCEEETT---TEEEETTEEEECSEEECTTCCHHHHHHHHTHHHHHHHHTTCCEEE
T ss_pred             CCCCEEEEEEeCCCChHHhccCCceEEEECCC---CeEEECCceeECCEEECCCCCHHHHHHHHHHHHHHHHHcCCCcce
Confidence            57999999999999999988888777766653   222           2457889999999  8999999999999999


Q ss_pred             Eeeee
Q psy5722          80 KRMTV   84 (86)
Q Consensus        80 f~~~~   84 (86)
                      |+||-
T Consensus        80 ~aYGq   84 (323)
T d1bg2a_          80 FAYGQ   84 (323)
T ss_dssp             EEECS
T ss_pred             eeecc
Confidence            99984

>d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin
species: Mouse (Mus musculus), kif2c [TaxId: 10090]

Probab=99.73  E-value=1.9e-18  Score=127.53  Aligned_cols=71  Identities=20%  Similarity=0.214  Sum_probs=56.8

Q ss_pred             CCCeeEEEeecCCCchhhhcCCceeEecCCCCC-----------------cceE----EeCCCCCccceee--hhhHHHH
Q psy5722          14 EDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGGE-----------------ENGL----SLGIGTASESSSE--HTKLIGD   70 (86)
Q Consensus        14 ~~nIrV~vRvRPln~~E~~~g~~~~v~~~~~~~-----------------~~~v----~~~~~~tQ~~Vye--~~plV~~   70 (86)
                      +.+|+|+||+|||+++|+..++..++.++++..                 ...+    .|++..+|++||+  ++|||++
T Consensus        29 ~~~I~V~vRvRPl~~~E~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~f~FD~vf~~~~~Q~~Vy~~~~~plv~~  108 (362)
T d1v8ka_          29 EHRICVCVRKRPLNKQELAKKEIDVISVPSKCLLLVHEPKLKVDLTKYLENQAFCFDFAFDETASNEVVYRFTARPLVQT  108 (362)
T ss_dssp             CCCEEEEEEECCCCHHHHHTTCCBCEECCSSSEEEEEEEEECTTCCEEEEEEEEECSEEECTTCCHHHHHHHTTHHHHHH
T ss_pred             CCCEEEEEEeCCCChHHhhCCCceEEEECCCcEEEEeCCccccccccCcCceeEeCCeecCCCCCHHHHHHHHHHHHHHH
Confidence            458999999999999999888777776654200                 0111    2357779999999  9999999


Q ss_pred             HHcccceeEEeeee
Q psy5722          71 VITGQNDKEKRMTV   84 (86)
Q Consensus        71 vl~GYNgTIf~~~~   84 (86)
                      +|+|||+|||+||-
T Consensus       109 ~l~G~n~tifaYGq  122 (362)
T d1v8ka_         109 IFEGGKATCFAYGQ  122 (362)
T ss_dssp             HHTTCEEEEEEEES
T ss_pred             HHhccCceEEeecc
Confidence            99999999999994

>d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin
species: Neurospora crassa [TaxId: 5141]

Probab=99.70  E-value=7.2e-18  Score=123.55  Aligned_cols=72  Identities=24%  Similarity=0.388  Sum_probs=57.7

Q ss_pred             cCCCeeEEEeecCCCchhhhcCCceeEecCCCC--------CcceE----EeCCCCCccceee--hhhHHHHHHccccee
Q psy5722          13 AEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSGG--------EENGL----SLGIGTASESSSE--HTKLIGDVITGQNDK   78 (86)
Q Consensus        13 ~~~nIrV~vRvRPln~~E~~~g~~~~v~~~~~~--------~~~~v----~~~~~~tQ~~Vye--~~plV~~vl~GYNgT   78 (86)
                      ...+|||+|||||++..|.+.+...++.+..+.        ....+    .|+.+.+|++||+  ++|+|+++|+|||+|
T Consensus         3 ~~~~I~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~~~~~~~~~f~FD~vf~~~~~q~~vy~~~~~plv~~~l~G~n~t   82 (354)
T d1goja_           3 SANSIKVVARFRPQNRVEIESGGQPIVTFQGPDTCTVDSKEAQGSFTFDRVFDMSCKQSDIFDFSIKPTVDDILNGYNGT   82 (354)
T ss_dssp             SSCBCEEEEEECCCCHHHHTTTCCBCEEECSTTEEEECSTTCCEEEECSEEECTTCCHHHHHHHHTHHHHHHHTTTCCEE
T ss_pred             CCCCEEEEEEcCCCChHHHhcCCceEEEEECCCeEEEcCCCCcceEECCeEcCCCCCHHHHHHHHHHHHHHHhhccCcee
Confidence            347899999999999999988877777766530        01122    2357779999999  899999999999999


Q ss_pred             EEeeee
Q psy5722          79 EKRMTV   84 (86)
Q Consensus        79 If~~~~   84 (86)
                      ||+||-
T Consensus        83 i~aYG~   88 (354)
T d1goja_          83 VFAYGQ   88 (354)
T ss_dssp             EEEECS
T ss_pred             EEeccc
Confidence            999994

>d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin motor Ncd (non-claret disjunctional)
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.69  E-value=9.7e-18  Score=123.78  Aligned_cols=73  Identities=21%  Similarity=0.123  Sum_probs=55.2

Q ss_pred             ccCCCeeEEEeecCCCchhhhcCCceeEecCCC--------------CCcceE----EeCCCCCccceee-hhhHHHHHH
Q psy5722          12 AAEDSIRVVCRFRPLNHSEEKAGSKFIVKFPSG--------------GEENGL----SLGIGTASESSSE-HTKLIGDVI   72 (86)
Q Consensus        12 ~~~~nIrV~vRvRPln~~E~~~g~~~~v~~~~~--------------~~~~~v----~~~~~~tQ~~Vye-~~plV~~vl   72 (86)
                      +.+|||||+||+||+++.|...+...++..+..              .....+    .|++..+|++||+ +.|+|+++|
T Consensus        42 ~~~gnIkV~vRvRP~~~~E~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~F~FD~vf~~~~~Q~~Vy~~v~plv~~vl  121 (368)
T d2ncda_          42 DLRGNIRVFCRIRPPLESEENRMCCTWTYHDESTVELQSIDAQAKSKMGQQIFSFDQVFHPLSSQSDIFEMVSPLIQSAL  121 (368)
T ss_dssp             HHHCSEEEEEEECCCCGGGTTSCBCEEEEETTTEEEEECSCHHHHTTTCCCEEECSEEECTTCCHHHHHTTTHHHHHHHH
T ss_pred             HhcCCEEEEEEeCCCCchhcCCCCcEEEeCCCCeEEEccCCccccCCcCceeeECCeEECCCCCccchHHHHHHHHHHHh
Confidence            467899999999999999976555444333321              001222    3457889999999 889999999


Q ss_pred             cccceeEEeeee
Q psy5722          73 TGQNDKEKRMTV   84 (86)
Q Consensus        73 ~GYNgTIf~~~~   84 (86)
                      +|||+|||+||-
T Consensus       122 ~G~n~ti~aYGq  133 (368)
T d2ncda_         122 DGYNICIFAYGQ  133 (368)
T ss_dssp             TTCEEEEEEECS
T ss_pred             cccceeEEeecc
Confidence            999999999984

>d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin
species: Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]

Probab=99.69  E-value=1e-17  Score=122.26  Aligned_cols=67  Identities=27%  Similarity=0.314  Sum_probs=55.9

Q ss_pred             CeeEEEeecCCCchhhhcCCceeEecCCCCCcceE--------------------EeCCCCCccceee--hhhHHHHHHc
Q psy5722          16 SIRVVCRFRPLNHSEEKAGSKFIVKFPSGGEENGL--------------------SLGIGTASESSSE--HTKLIGDVIT   73 (86)
Q Consensus        16 nIrV~vRvRPln~~E~~~g~~~~v~~~~~~~~~~v--------------------~~~~~~tQ~~Vye--~~plV~~vl~   73 (86)
                      ||||+||+||++..|...++..++.++..  ...+                    .|++..+|++||+  ++|||+++|+
T Consensus         1 NI~V~vRvRP~~~~e~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~f~FD~vf~~~~~q~~vy~~~~~~lv~~~l~   78 (345)
T d1x88a1           1 NIQVVVRCRPFNLAERKASAHSIVECDPV--RKEVSVRTGGLADKSSRKTYTFDMVFGASTKQIDVYRSVVCPILDEVIM   78 (345)
T ss_dssp             CCEEEEEECCCCHHHHHTTCCCCEEEETT--TTEEEEEEEEETTEEEEEEEECSEEECTTCCHHHHHHHHHHHHHHHHHT
T ss_pred             CeEEEEEECCCChhhhccCCCeEEEEcCC--CceEEEecCCCCCCCCcceEecCEEeCCCCCHHHHHHHHHHHhHHHHhc
Confidence            79999999999999988888777766553  1221                    2357789999999  8999999999


Q ss_pred             ccceeEEeeee
Q psy5722          74 GQNDKEKRMTV   84 (86)
Q Consensus        74 GYNgTIf~~~~   84 (86)
                      |||+|||+||-
T Consensus        79 G~n~~i~aYGq   89 (345)
T d1x88a1          79 GYNCTIFAYGQ   89 (345)
T ss_dssp             TCEEEEEEEEC
T ss_pred             cCCceEEeeee
Confidence            99999999994

>d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin
species: Mouse (Mus musculus), kif1a [TaxId: 10090]

Probab=99.64  E-value=5.7e-17  Score=118.49  Aligned_cols=69  Identities=19%  Similarity=0.242  Sum_probs=52.8

Q ss_pred             CeeEEEeecCCCchhhhcCCceeEecCCCC-----------CcceEEe----CCC--------CCccceee--hhhHHHH
Q psy5722          16 SIRVVCRFRPLNHSEEKAGSKFIVKFPSGG-----------EENGLSL----GIG--------TASESSSE--HTKLIGD   70 (86)
Q Consensus        16 nIrV~vRvRPln~~E~~~g~~~~v~~~~~~-----------~~~~v~~----~~~--------~tQ~~Vye--~~plV~~   70 (86)
                      +|||+||+||++++|...+...++.++++.           ....+.|    ++.        .+|++||+  ++|+|++
T Consensus         2 sIrV~vRvRP~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~f~FD~vf~~~~~~~~~~~~sQ~~vy~~~~~plv~~   81 (349)
T d2zfia1           2 SVKVAVRVRPFNSREMSRDSKCIIQMSGSTTTIVNPKQPKETPKSFSFDYSYWSHTSPEDINYASQKQVYRDIGEEMLQH   81 (349)
T ss_dssp             CEEEEEEECCCCHHHHHTTCCBCEEEETTEEEECCTTCTTSCCEEEECSEEEECSSCTTSSSCCCHHHHHHHTHHHHHHH
T ss_pred             cEEEEEEeCCCChhHhcCCCcEEEEECCCcEEEECCCCCCcCCeeEEeceEeCCCCCccccccccHHHHHHHhhHHHHHH
Confidence            699999999999999888777666654420           0112222    222        47999999  9999999


Q ss_pred             HHcccceeEEeeee
Q psy5722          71 VITGQNDKEKRMTV   84 (86)
Q Consensus        71 vl~GYNgTIf~~~~   84 (86)
                      +|+|||+|||+||-
T Consensus        82 ~l~G~n~ti~aYGq   95 (349)
T d2zfia1          82 AFEGYNVCIFAYGQ   95 (349)
T ss_dssp             HHTTCCEEEEEECS
T ss_pred             HHhccCceeeeecc
Confidence            99999999999994

>d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin heavy chain-like protein
species: Potato (Solanum tuberosum) [TaxId: 4113]

Probab=99.63  E-value=9.3e-17  Score=118.31  Aligned_cols=69  Identities=20%  Similarity=0.198  Sum_probs=53.7

Q ss_pred             CeeEEEeecCCCchhhhcCCceeEecCCCC---------CcceE----EeCCCCCccceee-hhhHHHHHHcccceeEEe
Q psy5722          16 SIRVVCRFRPLNHSEEKAGSKFIVKFPSGG---------EENGL----SLGIGTASESSSE-HTKLIGDVITGQNDKEKR   81 (86)
Q Consensus        16 nIrV~vRvRPln~~E~~~g~~~~v~~~~~~---------~~~~v----~~~~~~tQ~~Vye-~~plV~~vl~GYNgTIf~   81 (86)
                      .|||+||+||+++.|...+...++...++.         ....+    .|++..+|++||+ ++|+|+++|+|||+|||+
T Consensus         1 rIkV~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~~~~~~~~~~f~FD~vf~~~~~q~~vy~~v~~lv~~~l~G~n~~i~a   80 (364)
T d1sdma_           1 KIRVYCRLRPLCEKEIIAKERNAIRSVDEFTVEHLWKDDKAKQHMYDRVFDGNATQDDVFEDTKYLVQSAVDGYNVCIFA   80 (364)
T ss_dssp             CCEEEEEECCCCHHHHHTTCCBCEEECSTTEEEEECSSSSEEEEECSEEECTTCCHHHHHHTTTHHHHHHHTTCEEEEEE
T ss_pred             CeEEEEEcCCCChhhcccCCCCeEEeCCCCeEEecCCCCCceEEECCeecCCCCCHHHHHHHHHHHHHHHhcCCceeeec
Confidence            489999999999999877766555444320         01122    3457789999999 989999999999999999


Q ss_pred             eee
Q psy5722          82 MTV   84 (86)
Q Consensus        82 ~~~   84 (86)
                      ||-
T Consensus        81 YGq   83 (364)
T d1sdma_          81 YGQ   83 (364)
T ss_dssp             ECS
T ss_pred             ccc
Confidence            984

>d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.59  E-value=3.2e-16  Score=113.72  Aligned_cols=68  Identities=24%  Similarity=0.182  Sum_probs=52.8

Q ss_pred             eeEEEeecCCCchhhhcCCceeEecCCCC-----------------CcceE----EeCCCCCccceee--hhhHHHHHH-
Q psy5722          17 IRVVCRFRPLNHSEEKAGSKFIVKFPSGG-----------------EENGL----SLGIGTASESSSE--HTKLIGDVI-   72 (86)
Q Consensus        17 IrV~vRvRPln~~E~~~g~~~~v~~~~~~-----------------~~~~v----~~~~~~tQ~~Vye--~~plV~~vl-   72 (86)
                      |||+||+||+++.|...++..++.+..+.                 +...+    .|++..+|++||+  ++|+|++++ 
T Consensus         2 IkV~vRvRP~~~~E~~~~~~~~v~~~~~~~~~v~~~~~~~~~~~~~~~~~F~fD~Vf~~~~~q~~vy~~~~~plv~~~~~   81 (330)
T d1ry6a_           2 IKVVVRKRPLSELEKKKKDSDIITVKNNCTLYIDEPRYKVDMTKYIERHEFIVDKVFDDTVDNFTVYENTIKPLIIDLYE   81 (330)
T ss_dssp             EEEEEEECCCCHHHHHTTCCBCEEEEETTEEEEEEEEEETTTEEEEEEEEEECSEEECTTCCHHHHHHHHTHHHHHHHHH
T ss_pred             EEEEEEeCCCChHHHhcCCceEEEECCCcEEEEcCCccccccccCcCcceEeCCeecCCCCCHHHHHHHHHHHHHHHHHh
Confidence            89999999999999887776665554420                 00111    3457789999999  999999988 


Q ss_pred             cccceeEEeeee
Q psy5722          73 TGQNDKEKRMTV   84 (86)
Q Consensus        73 ~GYNgTIf~~~~   84 (86)
                      +|||+|||+||.
T Consensus        82 ~G~n~~i~aYGq   93 (330)
T d1ry6a_          82 NGCVCSCFAYGQ   93 (330)
T ss_dssp             HCCEEEEEEECC
T ss_pred             cCCCeEEEeeec
Confidence            599999999985

>d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin motor Ncd (non-claret disjunctional)
species: Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]

Probab=99.57  E-value=7.1e-16  Score=112.34  Aligned_cols=69  Identities=16%  Similarity=0.183  Sum_probs=50.1

Q ss_pred             CCeeEEEeecCCCchhhhcCCceeEecCCC-----------------CCcceE----EeCCCCCccceee-hhhHHHHHH
Q psy5722          15 DSIRVVCRFRPLNHSEEKAGSKFIVKFPSG-----------------GEENGL----SLGIGTASESSSE-HTKLIGDVI   72 (86)
Q Consensus        15 ~nIrV~vRvRPln~~E~~~g~~~~v~~~~~-----------------~~~~~v----~~~~~~tQ~~Vye-~~plV~~vl   72 (86)
                      |||||+||+||+.+.|.. .+..++.++..                 .....+    .|++..+|++||+ +.|+|+++|
T Consensus         1 G~IrV~vRvRP~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~FD~vf~~~~~q~~vy~~v~~~v~~~l   79 (342)
T d1f9va_           1 GNIRVYCRIRPALKNLEN-SDTSLINVNEFDDNSGVQSMEVTKIQNTAQVHEFKFDKIFDQQDTNVDVFKEVGQLVQSSL   79 (342)
T ss_dssp             CEEEEEEEECCCCTTTCC-CTTEEEEECCCBTTTTBEEEEEEEGGGTTCEEEEEESEEECTTCCHHHHHHHHHHHHGGGG
T ss_pred             CcEEEEEEeCcCCccccc-CCCceEEeeccCCcceeeeccccccCCCCCceEeecCeEeCCCCCHHHHHHHhhhhhcchh
Confidence            689999999999877643 33333333221                 001122    3457789999999 779999999


Q ss_pred             cccceeEEeeee
Q psy5722          73 TGQNDKEKRMTV   84 (86)
Q Consensus        73 ~GYNgTIf~~~~   84 (86)
                      +|||+|||+||-
T Consensus        80 ~G~n~~i~aYGq   91 (342)
T d1f9va_          80 DGYNVCIFAYGQ   91 (342)
T ss_dssp             GTCCEEEEEECC
T ss_pred             cccccceeeeec
Confidence            999999999985