Psyllid ID: psy5752

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220--
Protein Sequence
MVKVPIRFSLSECDTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPESLGCNVVKNCHANAECVYNATSAGYRCQCAQGYVGNGVECHPLKSCLEDRSLCGKDSQGYVGNGVECHPLKSCLEDRSLCGKDASCVVASQGHFHCECNEGFTGNGITCKPVRKKESDFLLVNQGMFMLRVPYQPTRTDRGRPIINHPNQMLIGLCLSPCVLCVLQY
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccEEEEcccccEEcccccccccccccccccccccccccEEccccccEEEEcccccccccccccccccccccccccccccccccccccEEcccccccccccccccccccccccccEEEEEcccccccccccccccccccccccccccccEEEEccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccccEEccccccEEEEEcccccccccEcccccccccccccccccccEEEEccccccEEEEEcccccccccEccccccccccccccccccccccccccEccccccccccccccccccEEEEccccEEEEEEcccccccccEEcccccccccccccccccEHcccccccccccccccEEEEccHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
mvkvpirfslsecdtpchpnaqctspdefnESREQAKCICnfgytgdgvtecnpeslgcnvvknchanaecvynatsagyrcqcaqgyvgngvechplkscledrslcgkdsqgyvgngvechplkscledrslcgkdascvvasqghfhcecnegftgngitckpvrkkesDFLLVNQGMfmlrvpyqptrtdrgrpiinhpnqmliglclspcvlcvlqy
Flexible Loop (DISEMBL)
MVKVPIRFslsecdtpchpnaQCTSPDEFNESREQAKCICNFGYTGDGVTECNPESLGCNVVKNCHANAECVYNATSAGYRCQCAQGYVGNGVECHPLKSCLEDRSLCGKDSQGYVGNGVECHPLKSCLEDRSLCGKDASCVVASQGHFHCECNEGFTGNGITCKPVRKKESDFLLVNQGMFMLRVPYQPTRTDRGRPIINHPNQMLIGLCLSPCVLCVLQY
Low Complexity Region (SEG)
MVKVPIRFSLSECDTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPESLGCNVVKNCHANAECVYNATSAGYRCQCAQGYVGNGVECHPLKSCLEDRSLCGKDSQGYVGNGVECHPLKSCLEDRSLCGKDASCVVASQGHFHCECNEGFTGNGITCKPVRKKESDFLLVNQGMFMLRVPYQPTRTDRGRPIINHPNQMLIGLCLSPCVLCVLQY
Disordered region (IsUnstruct)
***********************************AKCICNFGYTGDGVTECNPESLGCNVVKNCHANAECVYNATSAGYRCQCAQGYVGNGVECHPLKSCLEDRSLCGKDSQGYVGNGVECHPLKSCLEDRSLCGKDASCVVASQGHFHCECNEGFTGNGITCKPVRKKESDFLLVNQGMFMLRVPYQPTRTDRGRPIINHPNQMLIGLCLSPCVLCVL**
Disordered Region (DISOPRED)
*V*VPIRFSLSECDTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPESLGCNVVKNCHANAECVYNATSAGYRCQCAQGYVGNGVECHPLKSCLEDRSLCGKDSQGYVGNGVECHPLKSCLEDRSLCGKDASCVVASQGHFHCECNEGFTGNGITCKPVRKKESDFLLVNQGMFMLRVPYQPTRTDRGRPIINHPNQMLIGLCLSPCVLCVLQ*
Disordered Region (DISEMBL)
MVKVPIRFSLSECDTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPESLGCNVVKNCHANAECVYNATSAGYRCQCAQGYVGNGVECHPLKSCLEDRSLCGKDSQGYVGNGVECHPLKSCLEDRSLCGKDASCVVASQGHFHCECNEGFTGNGITCKPVRKKESDFLLVNQGMFMLRVPYQPTRTDRGRPIINHPNQMLIGLCLSPCVLCVLQY
Disordered Region (DISPRO)
MVKVPIRFSLSECDTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPESLGCNVVKNCHANAECVYNATSAGYRCQCAQGYVGNGVECHPLKSCLEDRSLCGKDSQGYVGNGVECHPLKSCLEDRSLCGKDASCVVASQGHFHCECNEGFTGNGITCKPVRKKESDFLLVNQGMFMLRVPYQPTRTDRGRPIINHPNQMLIGLCLSPCVLCVLQY
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVKVPIRFSLSECDTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPESLGCNVVKNCHANAECVYNATSAGYRCQCAQGYVGNGVECHPLKSCLEDRSLCGKDSQGYVGNGVECHPLKSCLEDRSLCGKDASCVVASQGHFHCECNEGFTGNGITCKPVRKKESDFLLVNQGMFMLRVPYQPTRTDRGRPIINHPNQMLIGLCLSPCVLCVLQY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	222	2.2.26 [Sep-21-2011]
Q8R4U0	2559	Stabilin-2 OS=Mus musculu	yes	N/A	0.680	0.059	0.361	1e-17
Q8WWQ8	2551	Stabilin-2 OS=Homo sapien	yes	N/A	0.810	0.070	0.311	2e-15
Q8CFM6	1431	Stabilin-2 (Fragment) OS=	no	N/A	0.675	0.104	0.268	4e-09
Q9NY15	2570	Stabilin-1 OS=Homo sapien	no	N/A	0.554	0.047	0.288	5e-09
P98133	2871	Fibrillin-1 OS=Bos taurus	no	N/A	0.563	0.043	0.296	2e-08
P35555	2871	Fibrillin-1 OS=Homo sapie	no	N/A	0.563	0.043	0.296	2e-08
Q61554	2871	Fibrillin-1 OS=Mus muscul	no	N/A	0.563	0.043	0.296	4e-08
Q8R4Y4	2571	Stabilin-1 OS=Mus musculu	no	N/A	0.576	0.049	0.306	8e-08
Q9ESC1	738	EGF, latrophilin and seve	no	N/A	0.527	0.158	0.331	4e-07
Q9HBW9	690	EGF, latrophilin and seve	no	N/A	0.297	0.095	0.378	2e-06

>sp|Q8R4U0|STAB2_MOUSE Stabilin-2 OS=Mus musculus GN=Stab2 PE=1 SV=1

 Score = 89.7 bits (221), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 64/177 (36%), Positives = 87/177 (49%), Gaps = 26/177 (14%)

Query: 17   CHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPES--LGCNVVKNCHANAECVYN 74
            CH +A C        S E A C+CN GY GDG T C+ +   LG      C  NAEC+  
Sbjct: 844  CHIHATC------EYSNETASCVCNDGYEGDG-TLCSKKDPCLGSTSRGGCSPNAECI-Q 895

Query: 75   ATSAGYRCQCAQGYVGNGVECHPLKSCL-------EDRSLC-----GKD----SQGYVGN 118
            A++  Y C C +G+ GNG +C  + SCL        D + C     G++     +G+ GN
Sbjct: 896  ASTGTYSCVCQRGWTGNGRDCVEINSCLLPSSGGCHDNATCLYVGPGQNECECKKGFRGN 955

Query: 119  GVECHPLKSCLEDRSLCGKDASCVVASQGHFHCECNEGFTGNGITCKPVRKKESDFL 175
            G++C P+ SCLE    C   A+C     G + C C EG+ GNG+ C      E  FL
Sbjct: 956  GIDCEPIISCLEQIEKCHPLATCQYTLSGVWSCVCQEGYEGNGVLCYGNVLMELSFL 1012

Phosphatidylserine receptor that enhances the engulfment of apoptotic cells. Hyaluronan receptor that binds to and mediates endocytosis of hyaluronic acid (HA). Acts also, in different species, as a primary systemic scavenger receptor for heparin (Hep), chondroitin sulfate (CS), dermatan sulfate (DS), nonglycosaminoglycan (GAG), acetylated low-density lipoprotein (AcLDL), pro-collagen propeptides and advanced glycation end products (AGE). May serve to maintain tissue integrity by supporting extracellular matrix turnover or it may contribute to maintaining fluidity of bodily liquids by resorption of hyaluronan. Counter receptor which plays an important role in lymphocyte recruitment in the hepatic vasculature. Binds to both Gram-positive and Gram-negative bacteria and may play a role in defense against bacterial infection. The proteolytically processed short form also functions as an endocytosis receptor for heparin internalisation as well as HA and CS.
Mus musculus (taxid: 10090)

>sp|Q8WWQ8|STAB2_HUMAN Stabilin-2 OS=Homo sapiens GN=STAB2 PE=1 SV=3

 Score = 82.4 bits (202), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 91/209 (43%), Gaps = 29/209 (13%)

Query: 17   CHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPESLGCNVVKNCHANAECVYNAT 76
            CH +A C        S   A CIC  GY GDG      +         C  NAEC+   T
Sbjct: 837  CHIHATC------EYSNGTASCICKAGYEGDGTLCSEMDPCTGLTPGGCSRNAECIKTGT 890

Query: 77   SAGYRCQCAQGYVGNGVECHPLKSCL-------EDRSLC-----GKD----SQGYVGNGV 120
               + C C QG+ GNG +C  + +CL        D + C     G++     +G+ GNG+
Sbjct: 891  GT-HTCVCQQGWTGNGRDCSEINNCLLPSAGGCHDNASCLYVGPGQNECECKKGFRGNGI 949

Query: 121  ECHPLKSCLEDRSLCGKDASCVVASQGHFHCECNEGFTGNGITCKPVRKKESDFL----L 176
            +C P+ SCLE    C   ASC   S G + C C EG+ G+G  C      E  FL    +
Sbjct: 950  DCEPITSCLEQTGKCHPLASCQSTSSGVWSCVCQEGYEGDGFLCYGNAAVELSFLSEAAI 1009

Query: 177  VNQGMFMLRVPYQPTRTDRGRPIINHPNQ 205
             N+  ++     QPT +      +  P+Q
Sbjct: 1010 FNR--WINNASLQPTLSATSNLTVLVPSQ 1036

Phosphatidylserine receptor that enhances the engulfment of apoptotic cells. Hyaluronan receptor that binds to and mediates endocytosis of hyaluronic acid (HA). Acts also, in different species, as a primary systemic scavenger receptor for heparin (Hep), chondroitin sulfate (CS), dermatan sulfate (DS), nonglycosaminoglycan (GAG), acetylated low-density lipoprotein (AcLDL), pro-collagen propeptides and advanced glycation end products (AGE). May serve to maintain tissue integrity by supporting extracellular matrix turnover or it may contribute to maintaining fluidity of bodily liquids by resorption of hyaluronan. Counter receptor which plays an important role in lymphocyte recruitment in the hepatic vasculature. Binds to both Gram-positive and Gram-negative bacteria and may play a role in defense against bacterial infection. The proteolytically processed 190 kDa form also functions as an endocytosis receptor for heparin internalisation as well as HA and CS.

Homo sapiens (taxid: 9606)

>sp|Q8CFM6|STAB2_RAT Stabilin-2 (Fragment) OS=Rattus norvegicus GN=Stab2 PE=1 SV=1

 Score = 61.6 bits (148), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 76/186 (40%), Gaps = 36/186 (19%)

Query: 2   VKVPIRFSLSECDTPCHPNAQCT-SPDEFNESREQAKCICNFGYTGDG-----VTECNPE 55
           VK  +  +   C+  CH +A C   PD       +A C C  G+ G+G     +  C   
Sbjct: 289 VKCDMEITTDNCNGTCHTSANCLLDPDG------KASCKCAAGFRGNGTVCTAINACETS 342

Query: 56  SLGCNVVKNCHANAECVYNATSAGYR-CQCAQGYVGNGVECHPLKSCLEDRSLCGKDSQ- 113
           + GC+   +C          T+ G R C C  GY G+G+ C  +  CLE+   C ++++ 
Sbjct: 343 NGGCSTKADC--------KRTTPGNRVCVCKAGYTGDGIVCLEINPCLENHGGCDRNAEC 394

Query: 114 --------------GYVGNGVECHPLKSCLEDRSLCGKDASCVVASQGHFHCECNEGFTG 159
                          Y G+G  C  +  CL +   C   A C    Q    C C   +TG
Sbjct: 395 TQTGPNQAVCNCLPKYTGDGKVCSLINVCLTNNGGCSPFAFCNYTEQDQRICTCKPDYTG 454

Query: 160 NGITCK 165
           +GI C+
Sbjct: 455 DGIVCR 460

Phosphatidylserine receptor that enhances the engulfment of apoptotic cells. Hyaluronan receptor that binds to and mediates endocytosis of hyaluronic acid (HA). Acts also, in different species, as a primary systemic scavenger receptor for heparin (Hep), chondroitin sulfate (CS), dermatan sulfate (DS), nonglycosaminoglycan (GAG), acetylated low-density lipoprotein (AcLDL), pro-collagen propeptides and advanced glycation end products (AGE). May serve to maintain tissue integrity by supporting extracellular matrix turnover or it may contribute to maintaining fluidity of bodily liquids by resorption of hyaluronan. Counter receptor which plays an important role in lymphocyte recruitment in the hepatic vasculature. Binds to both Gram-positive and Gram-negative bacteria and may play a role in defense against bacterial infection. The proteolytically processed 175 kDa form also functions as an endocytosis receptor for heparin internalisation as well as HA and CS.

Rattus norvegicus (taxid: 10116)

>sp|Q9NY15|STAB1_HUMAN Stabilin-1 OS=Homo sapiens GN=STAB1 PE=1 SV=3

 Score = 61.2 bits (147), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 58/142 (40%), Gaps = 19/142 (13%)

Query: 36   AKCICNFGYTGDGVTECNPESLGCNVVKNCHANAECVYNATSAGYRCQCAQGYVGNGVEC 95
              C+CN G+ G     C+ +       + C  NA CV ++  A   C CA GY GNG+ C
Sbjct: 1398 GSCVCNVGWQG---LRCDQKITSPQCPRKCDPNANCVQDSAGAS-TCACAAGYSGNGIFC 1453

Query: 96   HPLKSCLEDRSLCGKDS---------------QGYVGNGVECHPLKSCLEDRSLCGKDAS 140
              +  C      C   +                GY+G+G  C  + SCL     C   A 
Sbjct: 1454 SEVDPCAHGHGGCSPHANCTKVAPGQRTCTCQDGYMGDGELCQEINSCLIHHGGCHIHAE 1513

Query: 141  CVVASQGHFHCECNEGFTGNGI 162
            C+        C C EG++G+GI
Sbjct: 1514 CIPTGPQQVSCSCREGYSGDGI 1535

Acts as a scavenger receptor for acetylated low density lipoprotein. Binds to both Gram-positive and Gram-negative bacteria and may play a role in defense against bacterial infection. When inhibited in endothelial tube formation assays, there is a marked decrease in cell-cell interactions, suggesting a role in angiogenesis. Involved in the delivery of newly synthesized CHID1/SI-CLP from the biosynthetic compartment to the endosomal/lysosomal system.

Homo sapiens (taxid: 9606)

>sp|P98133|FBN1_BOVIN Fibrillin-1 OS=Bos taurus GN=FBN1 PE=1 SV=1

 Score = 59.3 bits (142), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 27/152 (17%)

Query: 38   CICNFGYTGD----GVTECNPESLGCNVVKNCHANAECVYNATSAGYRCQCAQGYVGNGV 93
            C C+ GY+G     G T+ N   +G     NC  +A C   A S  ++C C+ G++G+G+
Sbjct: 1305 CHCDMGYSGKKGKTGCTDINECEIG---AHNCDRHAVCTNTAGS--FKCSCSPGWIGDGI 1359

Query: 94   ECHPLKSCLEDRSLCGKDS--------------QGYVGNGVECHPLKSCLEDRSLCGKDA 139
            +C  L  C     +C + +              +GY G+G  C  L  C E+ +LCG + 
Sbjct: 1360 KCTDLDECSNGTHMCSQHADCKNTMGSYRCLCKEGYTGDGFTCTDLDECSENLNLCG-NG 1418

Query: 140  SCVVASQGHFHCECNEGF--TGNGITCKPVRK 169
             C+ A  G + CEC+ GF  + +G  C+ + +
Sbjct: 1419 QCLNAP-GGYRCECDMGFVPSADGKACEDIDE 1449

Fibrillins are structural components of 10-12 nm extracellular calcium-binding microfibrils, which occur either in association with elastin or in elastin-free bundles. Fibrillin-1-containing microfibrils provide long-term force bearing structural support. Regulates osteoblast maturation by controlling TGF-beta bioavailability and calibrating TGF-beta and BMP levels, respectively.

Bos taurus (taxid: 9913)

>sp|P35555|FBN1_HUMAN Fibrillin-1 OS=Homo sapiens GN=FBN1 PE=1 SV=3

 Score = 59.3 bits (142), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 27/152 (17%)

Query: 38   CICNFGYTGD----GVTECNPESLGCNVVKNCHANAECVYNATSAGYRCQCAQGYVGNGV 93
            C C+ GY+G     G T+ N   +G     NC  +A C   A S  ++C C+ G++G+G+
Sbjct: 1305 CHCDMGYSGKKGKTGCTDINECEIG---AHNCGKHAVCTNTAGS--FKCSCSPGWIGDGI 1359

Query: 94   ECHPLKSCLEDRSLCGKDS--------------QGYVGNGVECHPLKSCLEDRSLCGKDA 139
            +C  L  C     +C + +              +GY G+G  C  L  C E+ +LCG + 
Sbjct: 1360 KCTDLDECSNGTHMCSQHADCKNTMGSYRCLCKEGYTGDGFTCTDLDECSENLNLCG-NG 1418

Query: 140  SCVVASQGHFHCECNEGF--TGNGITCKPVRK 169
             C+ A  G + CEC+ GF  + +G  C+ + +
Sbjct: 1419 QCLNAP-GGYRCECDMGFVPSADGKACEDIDE 1449

Fibrillins are structural components of 10-12 nm extracellular calcium-binding microfibrils, which occur either in association with elastin or in elastin-free bundles. Fibrillin-1-containing microfibrils provide long-term force bearing structural support. Regulates osteoblast maturation by controlling TGF-beta bioavailability and calibrating TGF-beta and BMP levels, respectively.

Homo sapiens (taxid: 9606)

>sp|Q61554|FBN1_MOUSE Fibrillin-1 OS=Mus musculus GN=Fbn1 PE=1 SV=1

 Score = 58.2 bits (139), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 73/152 (48%), Gaps = 27/152 (17%)

Query: 38   CICNFGYTGD----GVTECNPESLGCNVVKNCHANAECVYNATSAGYRCQCAQGYVGNGV 93
            C C+ GY+G     G T+ N   +G     NC  +A C   A S  ++C C+ G++G+G+
Sbjct: 1305 CHCDMGYSGKKGKTGCTDINECEIG---AHNCGRHAVCTNTAGS--FKCSCSPGWIGDGI 1359

Query: 94   ECHPLKSCLEDRSLCGKDSQ--------------GYVGNGVECHPLKSCLEDRSLCGKDA 139
            +C  L  C     +C + +               GY G+G  C  L  C E+ +LCG + 
Sbjct: 1360 KCTDLDECSNGTHMCSQHADCKNTMGSYRCLCKDGYTGDGFTCTDLDECSENLNLCG-NG 1418

Query: 140  SCVVASQGHFHCECNEGF--TGNGITCKPVRK 169
             C+ A  G + CEC+ GF  + +G  C+ + +
Sbjct: 1419 QCLNAP-GGYRCECDMGFVPSADGKACEDIDE 1449

Fibrillins are structural components of 10-12 nm extracellular calcium-binding microfibrils, which occur either in association with elastin or in elastin-free bundles. Fibrillin-1-containing microfibrils provide long-term force bearing structural support. Regulates osteoblast maturation by controlling TGF-beta bioavailability and calibrating TGF-beta and BMP levels, respectively.

Mus musculus (taxid: 10090)

>sp|Q8R4Y4|STAB1_MOUSE Stabilin-1 OS=Mus musculus GN=Stab1 PE=1 SV=1

 Score = 57.4 bits (137), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 61/150 (40%), Gaps = 22/150 (14%)

Query: 33   REQAKCICNFGYTGDGVTECNPESLGCNVVKNCHANAECVYNATSAGY-RCQCAQGYVGN 91
            R    C+C+ G+ G     C+ +       K C  NA C+ +  SAG   C CA GY GN
Sbjct: 1396 RGNGSCVCHAGWQG---LRCDQKITDHQCPKKCDPNANCIQD--SAGIPACVCAAGYSGN 1450

Query: 92   GVECHPLKSCLEDRSLCGKDS---------------QGYVGNGVECHPLKSCLEDRSLCG 136
            G  C  +  C      C   +                GY G+G  C  + SCL     C 
Sbjct: 1451 GSYCSEVDPCASGHGGCSPYANCTKVAPGQRTCTCQDGYTGDGELCQEINSCLVHNGGCH 1510

Query: 137  KDASCVVASQGHFHCECNEGFTGNGI-TCK 165
              A C+        C C EG++G+GI TCK
Sbjct: 1511 VHAECIPTGPQQVSCSCREGYSGDGIQTCK 1540

Acts as a scavenger receptor for acetylated low density lipoprotein. Binds to both Gram-positive and Gram-negative bacteria and may play a role in defense against bacterial infection. When inhibited in endothelial tube formation assays, there is a marked decrease in cell-cell interactions, suggesting a role in angiogenesis. Involved in the delivery of newly synthesized CHID1/SI-CLP from the biosynthetic compartment to the endosomal/lysosomal system.

Mus musculus (taxid: 10090)

>sp|Q9ESC1|ELTD1_RAT EGF, latrophilin and seven transmembrane domain-containing protein 1 OS=Rattus norvegicus GN=Eltd1 PE=1 SV=1

 Score = 55.1 bits (131), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 65/145 (44%), Gaps = 28/145 (19%)

Query: 13  CDTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPESLGCNVVKNCHANAECV 72
           C TPC PNA+C   DE       A C C+ GYTG+G+T C      CN    C  +A C 
Sbjct: 22  CKTPCLPNAKCEVLDEV------AACFCSTGYTGNGITICEDVD-ECNETSVCGDHAVC- 73

Query: 73  YNATSAGYRCQCAQGYVGNGVECHPLKSCLEDRSLCGKDSQGYVGNGVECHPLKSCLEDR 132
              T+ G+ C C +GY                ++  GK +Q    +G  C  +  C  + 
Sbjct: 74  -ENTNGGFSCFCVEGY----------------QTSTGK-TQFTPNDGSYCQDVDEC-NET 114

Query: 133 SLCGKDASCVVASQGHFHCECNEGF 157
           S+CG  A C   + G F C C EG+
Sbjct: 115 SVCGDHAVC-ENTNGGFSCFCVEGY 138

Could be involved in cardiac development.

Rattus norvegicus (taxid: 10116)

>sp|Q9HBW9|ELTD1_HUMAN EGF, latrophilin and seven transmembrane domain-containing protein 1 OS=Homo sapiens GN=ELTD1 PE=1 SV=3

 Score = 52.8 bits (125), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 8/74 (10%)

Query: 15 TPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPESLGCNVVKNCHANAECVYN 74
          TPC PNA+C    E     E   C CN G++G+GVT C  ++   N+ ++C  NA C   
Sbjct: 25 TPCLPNAKC----EIRNGIE--ACYCNMGFSGNGVTICEDDNECGNLTQSCGENANC--T 76

Query: 75 ATSAGYRCQCAQGY 88
           T   Y C C  G+
Sbjct: 77 NTEGSYYCMCVPGF 90

Could be involved in cardiac development.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	222
380021554	1318	PREDICTED: nidogen-2-like [Apis florea]	0.788	0.132	0.409	9e-33
328787858	1312	PREDICTED: LOW QUALITY PROTEIN: nidogen-	0.788	0.133	0.409	1e-32
307166772	1366	Nidogen-1 [Camponotus floridanus]	0.788	0.128	0.419	2e-31
340712752	1284	PREDICTED: nidogen-2-like [Bombus terres	0.761	0.131	0.406	4e-31
383847655	1294	PREDICTED: LOW QUALITY PROTEIN: nidogen-	0.774	0.132	0.400	1e-30
350409208	1284	PREDICTED: nidogen-2-like [Bombus impati	0.761	0.131	0.411	2e-30
307207472	1251	Nidogen-2 [Harpegnathos saltator]	0.729	0.129	0.405	5e-30
332021224	1297	Nidogen-1 [Acromyrmex echinatior]	0.756	0.129	0.384	6e-29
321473827	1373	hypothetical protein DAPPUDRAFT_314322 [	0.729	0.117	0.350	3e-28
242024896	1512	low density lipoprotein receptor, putati	0.747	0.109	0.363	4e-27

>gi|380021554|ref|XP_003694628.1| PREDICTED: nidogen-2-like [Apis florea]

 Score =  145 bits (367), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 86/210 (40%), Positives = 107/210 (50%), Gaps = 35/210 (16%)

Query: 4    VPIRFSLSECDT---PCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPESLGCN 60
            V  R  +S+C T    CH NAQC S  E        +C+C  GY GDG+ +C  + +GCN
Sbjct: 875  VDSRCVVSDCSTNPSQCHVNAQCVSTGEGG-----YRCVCTEGYNGDGIRQCVEDHIGCN 929

Query: 61   VVKNCHANAECVYNATSAGYRCQCAQGYVGNGVECHPLKSCLEDRSLCGKDSQGYVGNGV 120
            V+ NC  NA C YN TSA + C C                            QGY G+G 
Sbjct: 930  VLNNCGRNAVCGYNQTSANFVCIC---------------------------QQGYYGDGF 962

Query: 121  ECHPLKSCLEDRSLCGKDASCVVASQGHFHCECNEGFTGNGITCKPVRKKESDFLLVNQG 180
             C P  SC  D ++C  DA+CV A +  F C CNEGF G+G  CK   K E++FLLVNQG
Sbjct: 963  TCLPQSSCRHDPAICSPDATCVAAGENQFACVCNEGFAGDGTNCKSRPKHEANFLLVNQG 1022

Query: 181  MFMLRVPYQPTRTDRGRPIINHPNQMLIGL 210
            M  LR+P+ PT  D G PI     QM I +
Sbjct: 1023 MATLRIPFAPTYEDPGTPIYIAYMQMAIAI 1052

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328787858|ref|XP_392328.4| PREDICTED: LOW QUALITY PROTEIN: nidogen-2 [Apis mellifera]

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 86/210 (40%), Positives = 108/210 (51%), Gaps = 35/210 (16%)

Query: 4    VPIRFSLSECDT---PCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPESLGCN 60
            V  R  +S+C T    CH NAQCTS  E        +C+C  GY GDG+ +C  + +GCN
Sbjct: 869  VDSRCVVSDCSTNPSQCHVNAQCTSIGEGG-----YRCVCAEGYNGDGIRQCVEDHIGCN 923

Query: 61   VVKNCHANAECVYNATSAGYRCQCAQGYVGNGVECHPLKSCLEDRSLCGKDSQGYVGNGV 120
            V+ NC  NA C YN TSA + C C                            QGY G+G 
Sbjct: 924  VLNNCGRNAVCGYNQTSANFVCVC---------------------------QQGYYGDGF 956

Query: 121  ECHPLKSCLEDRSLCGKDASCVVASQGHFHCECNEGFTGNGITCKPVRKKESDFLLVNQG 180
             C P  SC  D ++C  DA+CV A +  + C CNEGF G+G  CK   K E++FLLVNQG
Sbjct: 957  TCLPQSSCRHDPAICSPDATCVAAGENQYACVCNEGFIGDGTNCKSRPKHEANFLLVNQG 1016

Query: 181  MFMLRVPYQPTRTDRGRPIINHPNQMLIGL 210
            M  LR+P+ PT  D G PI     QM I +
Sbjct: 1017 MATLRIPFAPTYEDPGSPIYIAYMQMAIAI 1046

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307166772|gb|EFN60734.1| Nidogen-1 [Camponotus floridanus]

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/210 (41%), Positives = 107/210 (50%), Gaps = 35/210 (16%)

Query: 4    VPIRFSLSECDT---PCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPESLGCN 60
            V  R  LS+C T    CH NAQC S  +        KC+C  GY GDG+ +C  + +GCN
Sbjct: 918  VDDRCVLSDCSTNPSQCHVNAQCVSSGDGG-----YKCVCISGYHGDGMRQCVEDHIGCN 972

Query: 61   VVKNCHANAECVYNATSAGYRCQCAQGYVGNGVECHPLKSCLEDRSLCGKDSQGYVGNGV 120
            V+ NC  NA C YN TSA + C C                             GY G+G 
Sbjct: 973  VLNNCGRNAVCGYNQTSANFACIC---------------------------QPGYYGDGF 1005

Query: 121  ECHPLKSCLEDRSLCGKDASCVVASQGHFHCECNEGFTGNGITCKPVRKKESDFLLVNQG 180
             C P  SC  D +LC  DASCV A +  F C CNEGF G+GI CK   K +S+FLLVNQG
Sbjct: 1006 TCLPHTSCRRDPNLCSSDASCVSAGENEFACVCNEGFIGDGINCKHRPKHDSNFLLVNQG 1065

Query: 181  MFMLRVPYQPTRTDRGRPIINHPNQMLIGL 210
            M   R+P+ PT+ + G PI     QM I L
Sbjct: 1066 MATHRIPFVPTQQNPGNPIYIAYTQMAIAL 1095

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340712752|ref|XP_003394919.1| PREDICTED: nidogen-2-like [Bombus terrestris]

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 83/204 (40%), Positives = 104/204 (50%), Gaps = 35/204 (17%)

Query: 10   LSECDT---PCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPESLGCNVVKNCH 66
            +S+C T    CH NAQC S  E        KC+C  GY GDGV +C    +GCNV+ NC 
Sbjct: 845  VSDCSTNPSQCHVNAQCVSSGEGG-----YKCVCIEGYNGDGVRQCVENHIGCNVLNNCG 899

Query: 67   ANAECVYNATSAGYRCQCAQGYVGNGVECHPLKSCLEDRSLCGKDSQGYVGNGVECHPLK 126
             NA C YN TSA + C C                             GY G+G  C P  
Sbjct: 900  RNAVCGYNQTSANFACVC---------------------------QPGYYGDGFTCLPQS 932

Query: 127  SCLEDRSLCGKDASCVVASQGHFHCECNEGFTGNGITCKPVRKKESDFLLVNQGMFMLRV 186
            SC  + ++C  DA+CV A +  F C CNEGFTG+G  C+   K E++FLLVNQGM  LR+
Sbjct: 933  SCRHEPTICSPDATCVAAGENQFACVCNEGFTGDGTNCEQRPKHEANFLLVNQGMATLRI 992

Query: 187  PYQPTRTDRGRPIINHPNQMLIGL 210
            P+ PT  + G PI     QM I +
Sbjct: 993  PFAPTHENLGSPIYIAYTQMAIAI 1016

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383847655|ref|XP_003699468.1| PREDICTED: LOW QUALITY PROTEIN: nidogen-2-like [Megachile rotundata]

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 83/207 (40%), Positives = 107/207 (51%), Gaps = 35/207 (16%)

Query: 7    RFSLSECDT---PCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPESLGCNVVK 63
            R  +S+C T    CH NAQC S  +        KC+C  GY GDG+ +C  + +GCNV+ 
Sbjct: 852  RCVVSDCSTNPSQCHVNAQCVSAGDGG-----YKCVCIEGYNGDGIQQCLEDHIGCNVLN 906

Query: 64   NCHANAECVYNATSAGYRCQCAQGYVGNGVECHPLKSCLEDRSLCGKDSQGYVGNGVECH 123
            NC  NA C YN TSA + C C                             GY G+G+ C 
Sbjct: 907  NCGRNAVCEYNQTSANFACIC---------------------------QPGYYGDGLTCL 939

Query: 124  PLKSCLEDRSLCGKDASCVVASQGHFHCECNEGFTGNGITCKPVRKKESDFLLVNQGMFM 183
            P  SC  + +LC  DA+CV A    F C CNEG+TG+G  CKP  K E++FLLVNQGM  
Sbjct: 940  PQLSCRHNPTLCSPDATCVAAGSNQFACVCNEGYTGDGNNCKPRPKHEANFLLVNQGMAT 999

Query: 184  LRVPYQPTRTDRGRPIINHPNQMLIGL 210
            LR+P+  T  + G PI    +QM I +
Sbjct: 1000 LRIPFTVTHDNPGSPIYIEYSQMAIAI 1026

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350409208|ref|XP_003488653.1| PREDICTED: nidogen-2-like [Bombus impatiens]

 Score =  137 bits (346), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 84/204 (41%), Positives = 105/204 (51%), Gaps = 35/204 (17%)

Query: 10   LSECDT---PCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPESLGCNVVKNCH 66
            +S+C T    CH NAQC S  E        KC+C  GY GDGV +C    +GCNV+ NC 
Sbjct: 845  VSDCSTNPSQCHVNAQCVSTGEGG-----YKCVCIEGYNGDGVRQCVENHIGCNVLNNCG 899

Query: 67   ANAECVYNATSAGYRCQCAQGYVGNGVECHPLKSCLEDRSLCGKDSQGYVGNGVECHPLK 126
             NA C YN TSA + C C  GY G+G  C  L+S                          
Sbjct: 900  RNAVCGYNQTSANFACVCQPGYYGDGFTCL-LQS-------------------------- 932

Query: 127  SCLEDRSLCGKDASCVVASQGHFHCECNEGFTGNGITCKPVRKKESDFLLVNQGMFMLRV 186
            SC  + ++C  DA+CV A +  F C CNEGF G+G  C+   K E++FLLVNQGM  LR+
Sbjct: 933  SCRHEPTICSPDATCVAAGENQFACVCNEGFAGDGTNCEQRPKHEANFLLVNQGMATLRI 992

Query: 187  PYQPTRTDRGRPIINHPNQMLIGL 210
            P+ PT  D G PI     QM I +
Sbjct: 993  PFAPTHEDLGSPIYIAYTQMAIAI 1016

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307207472|gb|EFN85183.1| Nidogen-2 [Harpegnathos saltator]

 Score =  136 bits (343), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 79/195 (40%), Positives = 103/195 (52%), Gaps = 33/195 (16%)

Query: 17  CHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPESLGCNVVKNCHANAECVY-NA 75
           CH NAQCT   +     ++ KC+C  GY GDG+ +C  + +GCNVV NC  NA C Y N 
Sbjct: 819 CHENAQCTPVGD-----DKYKCVCLSGYHGDGIGQCVQDHIGCNVVNNCGRNAVCAYDNQ 873

Query: 76  TSAGYRCQCAQGYVGNGVECHPLKSCLEDRSLCGKDSQGYVGNGVECHPLKSCLEDRSLC 135
           + A Y C C                             GY G+G  C+P  SC++D SLC
Sbjct: 874 SHANYVCMC---------------------------QPGYYGDGFTCYPQFSCMDDPSLC 906

Query: 136 GKDASCVVASQGHFHCECNEGFTGNGITCKPVRKKESDFLLVNQGMFMLRVPYQPTRTDR 195
             DA+CV   +  F C CN+G+TG+G  CK   K E++FLLVNQGM   R+P+ PT+ + 
Sbjct: 907 SPDATCVSVGENIFACVCNDGYTGDGANCKRRPKHEANFLLVNQGMATHRIPFIPTQQNP 966

Query: 196 GRPIINHPNQMLIGL 210
           G PI     QM I L
Sbjct: 967 GYPIYIAYTQMAIAL 981

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332021224|gb|EGI61609.1| Nidogen-1 [Acromyrmex echinatior]

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 78/203 (38%), Positives = 100/203 (49%), Gaps = 35/203 (17%)

Query: 11   SECDT---PCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPESLGCNVVKNCHA 67
            S+C T    CH NAQC        S    KC+C  GY GDG+ +C  + +GCNV+ NC  
Sbjct: 856  SDCSTNLSQCHVNAQCVP-----SSDSGYKCVCISGYHGDGMRQCVEDHIGCNVLNNCGR 910

Query: 68   NAECVYNATSAGYRCQCAQGYVGNGVECHPLKSCLEDRSLCGKDSQGYVGNGVECHPLKS 127
            NA C YN T+  + C C                             GY GNG  C P  S
Sbjct: 911  NAVCAYNQTTTNFACIC---------------------------QPGYYGNGFTCRPQSS 943

Query: 128  CLEDRSLCGKDASCVVASQGHFHCECNEGFTGNGITCKPVRKKESDFLLVNQGMFMLRVP 187
            C +D ++C  +A CV   +    C CN+G+ G+GI CK   K +S+FLLVNQGM   R+P
Sbjct: 944  CRDDPNICSSEAKCVSNGENQISCVCNDGYIGDGINCKRRPKHDSNFLLVNQGMATHRIP 1003

Query: 188  YQPTRTDRGRPIINHPNQMLIGL 210
            + PTR + G PI     QM I L
Sbjct: 1004 FMPTRQNPGNPIYIAYTQMAIAL 1026

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321473827|gb|EFX84793.1| hypothetical protein DAPPUDRAFT_314322 [Daphnia pulex]

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 68/194 (35%), Positives = 104/194 (53%), Gaps = 32/194 (16%)

Query: 17   CHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPESLGCNVVKNCHANAECVYNAT 76
            CH NA CT+    +ES  +  C+C  G+ G+G   C P  +GCNV+ NCH +A+C+Y+  
Sbjct: 955  CHVNAACTA----DESSGRYVCVCRSGFNGNGF-HCEPSVIGCNVINNCHRDAQCLYDPE 1009

Query: 77   SAGYRCQCAQGYVGNGVECHPLKSCLEDRSLCGKDSQGYVGNGVECHPLKSCLEDRSLCG 136
            S GYRC+C                            +GY G+G  C PL+SC+++  +C 
Sbjct: 1010 SIGYRCKC---------------------------KEGYTGSGTTCRPLESCVDNEGICH 1042

Query: 137  KDASCVVASQGHFHCECNEGFTGNGITCKPVRKKESDFLLVNQGMFMLRVPYQPTRTDRG 196
             +A C   ++G++ C C +GF G+G  C+ + K +  FLL++ GM +LRVP Q +    G
Sbjct: 1043 VNALCAWNTEGYYGCRCRDGFRGDGYQCQVIPKHDGKFLLISHGMSILRVPIQVSPATPG 1102

Query: 197  RPIINHPNQMLIGL 210
            RPI     Q  +G+
Sbjct: 1103 RPIYVQIFQAAVGI 1116

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242024896|ref|XP_002432862.1| low density lipoprotein receptor, putative [Pediculus humanus corporis] gi|212518371|gb|EEB20124.1| low density lipoprotein receptor, putative [Pediculus humanus corporis]

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 72/198 (36%), Positives = 100/198 (50%), Gaps = 32/198 (16%)

Query: 17   CHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPESLGCNVVKNC-HANAECVYNA 75
            CHP A C       E   + +C+C  GY GDG  +C      C+V  NC    A+C+++ 
Sbjct: 1074 CHPYAACV----VREETGKPECVCRPGYEGDGKIDCRKSEANCHVTFNCAEGTADCLFDD 1129

Query: 76   TSAGYRCQCAQGYVGNGVECHPLKSCLEDRSLCGKDSQGYVGNGVECHPLKSCLEDRSLC 135
                YRC+C                            QGY G+G+ C P+ +C E+ SLC
Sbjct: 1130 AVNEYRCRC---------------------------RQGYEGDGLNCTPIVTCAENASLC 1162

Query: 136  GKDASCVVASQGHFHCECNEGFTGNGITCKPVRKKESDFLLVNQGMFMLRVPYQPTRTDR 195
            G+ ASC+ +  G + C C+ GF GNGI CKP  +K  +FLL+NQG  ML+VPY PT  D 
Sbjct: 1163 GEHASCLPSQLGGYSCRCDPGFVGNGIRCKPEPEKTGNFLLLNQGNTMLKVPYNPTNHDP 1222

Query: 196  GRPIINHPNQMLIGLCLS 213
             +PI+    Q  IG+ + 
Sbjct: 1223 AKPIMMQYLQQSIGIDID 1240

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	222
WB|WBGene00003738	1584	nid-1 [Caenorhabditis elegans	0.851	0.119	0.314	1.1e-21
MGI|MGI:2178743	2559	Stab2 "stabilin 2" [Mus muscul	0.630	0.054	0.367	2.5e-21
UNIPROTKB|Q8WWQ8	2551	STAB2 "Stabilin-2" [Homo sapie	0.680	0.059	0.352	5.9e-20
FB|FBgn0026403	1370	Ndg "Nidogen/entactin" [Drosop	0.833	0.135	0.308	4.3e-17
UNIPROTKB|F1MYW1	2558	LOC100849141 "Uncharacterized	0.675	0.058	0.310	7.2e-17
ZFIN|ZDB-GENE-081107-41	1315	si:ch73-105b23.1 "si:ch73-105b	0.666	0.112	0.325	2.9e-16
UNIPROTKB|F1NW88	2517	F1NW88 "Uncharacterized protei	0.635	0.056	0.3	9.5e-16
UNIPROTKB|F1NPG7	2291	Gga.56200 "Uncharacterized pro	0.626	0.060	0.333	1.9e-15
UNIPROTKB|F1PQK8	2546	STAB2 "Uncharacterized protein	0.702	0.061	0.283	3.3e-15
WB|WBGene00022816	2687	fbn-1 [Caenorhabditis elegans	0.648	0.053	0.333	4.8e-15

WB|WBGene00003738 nid-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 268 (99.4 bits), Expect = 1.1e-21, P = 1.1e-21
 Identities = 66/210 (31%), Positives = 100/210 (47%)

Query:    17 CHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPESLGCNVVKN-CHANAECVYNA 75
             C+ NA C      N      KC+  F   G       P +  CN+    CHANA+CV + 
Sbjct:  1118 CYQNAHCVYDAILNA--HACKCVDGFKGDGTSCVPYAPAT-NCNLEPRICHANAQCVMHH 1174

Query:    76 TSAGYRCQCAQGYVGNG-VECHPLKS--CLED--RSLCGKD----------SQGYVGNGV 120
              +  Y C C  G  G+G  +C  +++  C      + C ++          + GY GNG 
Sbjct:  1175 DTNAYECICKPGSSGDGYTKCDVIETPRCTNCSIHAYCAQNPTSGAYQCKCNAGYNGNGH 1234

Query:   121 ECHPLKSCLEDRSLCGKDASCVVASQGHFHCECNEGFTGNGITCKPVRKKESDFLLVNQG 180
              C  + SCL+DRSLC ++A CV    GH+ C C+ G+ G+G +C P     SD LLV +G
Sbjct:  1235 LCVSMSSCLDDRSLCDENADCVPGEAGHYVCNCHYGYHGDGRSCSPESSTRSDKLLVARG 1294

Query:   181 MFMLRVPYQPTRTDRGRPIINHPNQMLIGL 210
             M +      P   + G+ +I  P+ + +G+
Sbjct:  1295 MAIFERSTNPD--EYGKQLIVIPHHIPVGI 1322

GO:0005509 "calcium ion binding" evidence=IEA

GO:0007160 "cell-matrix adhesion" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0045178 "basal part of cell" evidence=IDA

GO:0005604 "basement membrane" evidence=IDA

GO:0005201 "extracellular matrix structural constituent" evidence=IDA

GO:0001764 "neuron migration" evidence=IMP

GO:0050808 "synapse organization" evidence=IMP

GO:0035418 "protein localization to synapse" evidence=IMP

GO:0007271 "synaptic transmission, cholinergic" evidence=IMP

MGI|MGI:2178743 Stab2 "stabilin 2" [Mus musculus (taxid:10090)]

 Score = 267 (99.0 bits), Expect = 2.5e-21, P = 2.5e-21
 Identities = 61/166 (36%), Positives = 86/166 (51%)

Query:    17 CHPNAQCTSPDEFNESREQAKCICNFGYTGDGV--TECNPESLGCNVVKNCHANAECVYN 74
             CH +A C    E+  S E A C+CN GY GDG   ++ +P  LG      C  NAEC+  
Sbjct:   844 CHIHATC----EY--SNETASCVCNDGYEGDGTLCSKKDP-CLGSTSRGGCSPNAECI-Q 895

Query:    75 ATSAGYRCQCAQGYVGNGVECHPLKSCL-------EDRSLC-----GKDS----QGYVGN 118
             A++  Y C C +G+ GNG +C  + SCL        D + C     G++     +G+ GN
Sbjct:   896 ASTGTYSCVCQRGWTGNGRDCVEINSCLLPSSGGCHDNATCLYVGPGQNECECKKGFRGN 955

Query:   119 GVECHPLKSCLEDRSLCGKDASCVVASQGHFHCECNEGFTGNGITC 164
             G++C P+ SCLE    C   A+C     G + C C EG+ GNG+ C
Sbjct:   956 GIDCEPIISCLEQIEKCHPLATCQYTLSGVWSCVCQEGYEGNGVLC 1001

GO:0005041 "low-density lipoprotein receptor activity" evidence=ISO

GO:0005044 "scavenger receptor activity" evidence=ISO

GO:0005540 "hyaluronic acid binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005887 "integral to plasma membrane" evidence=ISO

GO:0006897 "endocytosis" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0030169 "low-density lipoprotein particle binding" evidence=ISO

GO:0042742 "defense response to bacterium" evidence=ISO

GO:0051635 "bacterial cell surface binding" evidence=ISO

GO:0051636 "Gram-negative bacterial cell surface binding" evidence=ISO

UNIPROTKB|Q8WWQ8 STAB2 "Stabilin-2" [Homo sapiens (taxid:9606)]

 Score = 254 (94.5 bits), Expect = 5.9e-20, P = 5.9e-20
 Identities = 62/176 (35%), Positives = 83/176 (47%)

Query:    17 CHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPESLGCNVVKN-CHANAECVYNA 75
             CH +A C    E+  S   A CIC  GY GDG T C+       +    C  NAEC+   
Sbjct:   837 CHIHATC----EY--SNGTASCICKAGYEGDG-TLCSEMDPCTGLTPGGCSRNAECIKTG 889

Query:    76 TSAGYRCQCAQGYVGNGVECHPLKSCL-------EDRSLC-----GKDS----QGYVGNG 119
             T   + C C QG+ GNG +C  + +CL        D + C     G++     +G+ GNG
Sbjct:   890 TGT-HTCVCQQGWTGNGRDCSEINNCLLPSAGGCHDNASCLYVGPGQNECECKKGFRGNG 948

Query:   120 VECHPLKSCLEDRSLCGKDASCVVASQGHFHCECNEGFTGNGITCKPVRKKESDFL 175
             ++C P+ SCLE    C   ASC   S G + C C EG+ G+G  C      E  FL
Sbjct:   949 IDCEPITSCLEQTGKCHPLASCQSTSSGVWSCVCQEGYEGDGFLCYGNAAVELSFL 1004

GO:0051636 "Gram-negative bacterial cell surface binding" evidence=IDA

GO:0006897 "endocytosis" evidence=ISS

GO:0009897 "external side of plasma membrane" evidence=ISS

GO:0005041 "low-density lipoprotein receptor activity" evidence=IDA

GO:0005044 "scavenger receptor activity" evidence=IDA

GO:0005887 "integral to plasma membrane" evidence=IDA

GO:0006898 "receptor-mediated endocytosis" evidence=TAS

GO:0007155 "cell adhesion" evidence=NAS

GO:0051635 "bacterial cell surface binding" evidence=IDA

GO:0015035 "protein disulfide oxidoreductase activity" evidence=NAS

GO:0030169 "low-density lipoprotein particle binding" evidence=IDA

GO:0042742 "defense response to bacterium" evidence=IDA

GO:0001525 "angiogenesis" evidence=NAS

GO:0005540 "hyaluronic acid binding" evidence=ISS

GO:0005886 "plasma membrane" evidence=TAS

GO:0005975 "carbohydrate metabolic process" evidence=TAS

GO:0030203 "glycosaminoglycan metabolic process" evidence=TAS

GO:0030212 "hyaluronan metabolic process" evidence=TAS

GO:0030214 "hyaluronan catabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

GO:0005737 "cytoplasm" evidence=IDA

FB|FBgn0026403 Ndg "Nidogen/entactin" [Drosophila melanogaster (taxid:7227)]

 Score = 224 (83.9 bits), Expect = 4.3e-17, P = 4.3e-17
 Identities = 66/214 (30%), Positives = 97/214 (45%)

Query:    17 CHPNAQCTSPDEFNESR--EQAKCICNFGYTGDGVTECNPESLGCNVVKNCHANAECVYN 74
             C   A+C S +   E+   +   C C   +  D    C P    C  V  C +NA C ++
Sbjct:   893 CQLAAECQSAEHCGENAFCDDGVCRCQADFERDVSDRCVPAGR-CGSVF-CGSNAICKWD 950

Query:    75 ATSAGYRCQCAQGYVGNGV--------ECHPLKSC--------LEDRSL--CGKDSQGYV 116
             +      C C  GY G+ +         CH L +C         ED +   C +   G+ 
Sbjct:   951 SAEGVQYCDCLDGYQGDALTGCTSKPLSCHVLNNCGIHATCEPTEDPANYEC-QCIAGFK 1009

Query:   117 GNGVECHPLKSCLEDRSLCGKDASCVVASQGHFHCECNEGFTGNGITCKPVRKKESDFLL 176
             G+G  C   ++CL + +LC  +A C   + G   C CN+GF GNG  C+  + ++SDFL+
Sbjct:  1010 GDGYVCIEEQNCLNNPTLCDMNAQCRSTNSG-LVCVCNQGFFGNGSLCQERQHQDSDFLI 1068

Query:   177 VNQGMFMLRVPYQPTRTDRGRPIINHPNQMLIGL 210
             V+QG+ + RVP         RPI     QM IGL
Sbjct:  1069 VSQGVMIARVPLNGRNV---RPI--SVAQMAIGL 1097

GO:0005604 "basement membrane" evidence=ISS

GO:0007160 "cell-matrix adhesion" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

UNIPROTKB|F1MYW1 LOC100849141 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 225 (84.3 bits), Expect = 7.2e-17, P = 7.2e-17
 Identities = 55/177 (31%), Positives = 84/177 (47%)

Query:    17 CHPNAQCTSPDEFNESREQAKCICNFGYTGDG--VTECNPESLGCNVVKNCHANAECVYN 74
             CH +  C    E+++    A C+C  GY GDG    E +P S G ++   C   AEC+  
Sbjct:   845 CHIHGTC----EYSDGT--ASCVCKPGYEGDGSFCVEMDPCS-G-SIPGGCSRYAECIRT 896

Query:    75 ATSAGYRCQCAQGYVGNGVECHPLKSCL-------EDRSLC-----GKDS----QGYVGN 118
                  + C C +G+ G+G +C  +  CL          + C     G++     +G+ GN
Sbjct:   897 GRGT-HTCVCREGWTGDGRDCSEINPCLLPSAGSCHHNATCLYVGPGQNECECKKGFQGN 955

Query:   119 GVECHPLKSCLEDRSLCGKDASCVVASQGHFHCECNEGFTGNGITCKPVRKKESDFL 175
             G++C P+ SCLE    C   A+C + S G + C C EG+ G+G+ C      E  FL
Sbjct:   956 GIDCEPITSCLEQTEKCHPLATCQLTSSGIWSCVCQEGYEGDGLLCYGNAAVELSFL 1012

GO:0051636 "Gram-negative bacterial cell surface binding" evidence=IEA

GO:0042742 "defense response to bacterium" evidence=IEA

GO:0030169 "low-density lipoprotein particle binding" evidence=IEA

GO:0005887 "integral to plasma membrane" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005044 "scavenger receptor activity" evidence=IEA

GO:0005041 "low-density lipoprotein receptor activity" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0005540 "hyaluronic acid binding" evidence=IEA

ZFIN|ZDB-GENE-081107-41 si:ch73-105b23.1 "si:ch73-105b23.1" [Danio rerio (taxid:7955)]

 Score = 216 (81.1 bits), Expect = 2.9e-16, P = 2.9e-16
 Identities = 57/175 (32%), Positives = 75/175 (42%)

Query:     8 FSLSECDTPCHPNAQC-TSPDEFNESREQAKCICNFGYTGDGVTECNPESLGCNVVKNCH 66
             F   ECD  CHP+  C  SP  F       +C+C+ G+ GDG+T  + +    NV     
Sbjct:   558 FPSLECDPACHPHGLCHPSPSGF-------QCVCDVGFKGDGLTCSDIDECEENVCPE-- 608

Query:    67 ANAECVYNATSAGYRCQCAQGYVGNGVECHPLKSCLEDRSLCGKDSQ------------- 113
                +CV N  S  + C C +GY  NG +C  L  C    S C K +Q             
Sbjct:   609 KETQCVNNPGS--FECTCKEGYSFNGTKCTDLDECESGVSNCSKFAQCVNTVGSHLCFCL 666

Query:   114 -GYVGNGVECHPLKSCLEDRSLCGKDASCVVASQGHFHCECNEGFTGNGITCKPV 167
              G+ G+G  C  +  C      C   ASC   S G F C C  G TG+G  C+ V
Sbjct:   667 SGFTGDGKNCSDINECHFQNGGCHPVASCT-NSPGSFKCTCPLGMTGSGFDCQDV 720

GO:0005509 "calcium ion binding" evidence=IEA

UNIPROTKB|F1NW88 F1NW88 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 198 (74.8 bits), Expect = 9.5e-16, Sum P(2) = 9.5e-16
 Identities = 51/170 (30%), Positives = 75/170 (44%)

Query:    13 CDTPCH-PNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPESL--GCNVVKNCHANA 69
             CD  C   + +C+S  + + S     C CN G+ G  VT C  E     CN    CH +A
Sbjct:  1369 CDQVCACVHGKCSSGIDGDGS-----CECNVGWRG--VT-CESEIKDDACN--NTCHTSA 1418

Query:    70 ECVYNATSAGYRCQCAQGYVGNGVECHPLKSCLEDRSLCGKDSQ---------------G 114
              C+  +    Y C+CA G+ GNG  C  + +C      C  +++               G
Sbjct:  1419 NCLLLSNDTAY-CKCAAGFTGNGTFCTAIDACETSNGGCSANAECRKTTPGNRVCVCKAG 1477

Query:   115 YVGNGVECHPLKSCLEDRSLCGKDASCVVASQGHFHCECNEGFTGNGITC 164
             Y G+GV C  +  CLE+   C K+A C         C C +G++G+G  C
Sbjct:  1478 YTGDGVVCLEINPCLENNGGCDKNAECTQTGPNQAACNCLKGYSGDGKRC 1527

GO:0005540 "hyaluronic acid binding" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0005041 "low-density lipoprotein receptor activity" evidence=IEA

GO:0005044 "scavenger receptor activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005887 "integral to plasma membrane" evidence=IEA

GO:0030169 "low-density lipoprotein particle binding" evidence=IEA

GO:0042742 "defense response to bacterium" evidence=IEA

GO:0051636 "Gram-negative bacterial cell surface binding" evidence=IEA

UNIPROTKB|F1NPG7 Gga.56200 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 211 (79.3 bits), Expect = 1.9e-15, P = 1.9e-15
 Identities = 55/165 (33%), Positives = 74/165 (44%)

Query:    17 CHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPESLGCNVVKN-CHANAECVYNA 75
             CH NA C+     N++   A+CIC  GY GDG + C P  L     +  C  NA C  + 
Sbjct:   835 CHQNAVCS----LNDT---ARCICMDGYEGDGFS-CQPIDLCSQPERGGCSPNALCT-ST 885

Query:    76 TSAGYRCQCAQGYVGNGVECHPLKSCL-EDRSLC-----------GKDS----QGYVGNG 119
                   CQC  G+ G+G  C  + +C+ E R  C           G+      +GY G+G
Sbjct:   886 GPGNATCQCNVGWTGDGKACVAIDNCMQESRGNCHIHADCIYIGPGQSKCVCKRGYAGDG 945

Query:   120 VECHPLKSCLEDRSLCGKDASCVVASQGHFHCECNEGFTGNGITC 164
               C  +  CL D   C   A CV    G   C C EG+ G+G+TC
Sbjct:   946 HNCDAINPCLMDNGGCHDLAICVPLGGGERSCACPEGYVGDGMTC 990

GO:0005540 "hyaluronic acid binding" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0005041 "low-density lipoprotein receptor activity" evidence=IEA

GO:0005044 "scavenger receptor activity" evidence=IEA

GO:0005887 "integral to plasma membrane" evidence=IEA

GO:0007267 "cell-cell signaling" evidence=IEA

GO:0016525 "negative regulation of angiogenesis" evidence=IEA

GO:0030169 "low-density lipoprotein particle binding" evidence=IEA

GO:0042742 "defense response to bacterium" evidence=IEA

GO:0051635 "bacterial cell surface binding" evidence=IEA

UNIPROTKB|F1PQK8 STAB2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 190 (71.9 bits), Expect = 3.3e-15, Sum P(2) = 3.3e-15
 Identities = 51/180 (28%), Positives = 75/180 (41%)

Query:     2 VKVPIRFSLSECDTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPESLGCNV 61
             VK     +  +C   CH +A C      N +   A C C  G+ G+G T C   +  C  
Sbjct:  1421 VKCDTEVTEDDCRGTCHTSANCL----LN-ANGTASCRCAAGFQGNG-TVCTAIN-ACET 1473

Query:    62 VKN-CHANAECVYNATSAGYRCQCAQGYVGNGVECHPLKSCLEDRSLCGKDSQ----G-- 114
                 C + A+C    T  G RC C  GY G+GV C  +  CLE+   C ++++    G  
Sbjct:  1474 SNGGCSSEADC-RRTTPGGRRCVCRAGYTGDGVVCLEINPCLENNGGCHRNAECTQTGPN 1532

Query:   115 ---------YVGNGVECHPLKSCLEDRSLCGKDASCVVASQGHFHCECNEGFTGNGITCK 165
                      Y G+G  C  + +CL     C + A C    +    C C   + G+G TC+
Sbjct:  1533 QAVCNCLPKYTGDGKVCTLINTCLTKNGGCSEFAVCNHTGREERTCTCKPNYIGDGFTCR 1592

GO:0007155 "cell adhesion" evidence=IEA

GO:0005540 "hyaluronic acid binding" evidence=IEA

WB|WBGene00022816 fbn-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 208 (78.3 bits), Expect = 4.8e-15, P = 4.8e-15
 Identities = 58/174 (33%), Positives = 74/174 (42%)

Query:    17 CHPNAQ-CTSPDEFNESR---EQAKCICNFGYTGDGVTECNPESLGCNVVKNCHANAECV 72
             C P+ Q C   D         +  +C C  G+TGDGV   +      N    C ANA CV
Sbjct:  2081 CSPHPQDCVLRDNLCSPEAVCQNRRCQCLPGFTGDGVKCVSIHERASNC-SQCDANAHCV 2139

Query:    73 YNATSAGYRCQCAQGYVGNGV--------------ECHPLKSCLEDRSLCGKDSQGYVGN 118
                   G  C+C  GY GNG+               CHP   C  +   C + S G+ GN
Sbjct:  2140 -----GGTTCKCNPGYFGNGLCCVPDPLDCVHFTGICHPNAVCNSESRQC-QCSSGFSGN 2193

Query:   119 GVECHPLKSCLEDRSLCGKDASCVVASQGHFHCECNEGFTGNGI-TCKPVRKKE 171
             GV C P KSC  D+S+C K+A C+        C C  GF G+    C  +  KE
Sbjct:  2194 GVSCFPQKSCRTDKSVCAKNAICLPTGS----CICRHGFKGDPFYKCSSLVSKE 2243

GO:0005509 "calcium ion binding" evidence=IEA

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0002119 "nematode larval development" evidence=IMP

GO:0018996 "molting cycle, collagen and cuticulin-based cuticle" evidence=IMP

GO:0040011 "locomotion" evidence=IMP

GO:0040010 "positive regulation of growth rate" evidence=IMP

GO:0000003 "reproduction" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	222
pfam12947	36	pfam12947, EGF_3, EGF domain	6e-04
pfam12947	36	pfam12947, EGF_3, EGF domain	0.001

>gnl|CDD|205157 pfam12947, EGF_3, EGF domain

 Score = 36.0 bits (84), Expect = 6e-04
 Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 2/32 (6%)

Query: 64 NCHANAECVYNATSAGYRCQCAQGYVGNGVEC 95
           CH NA C     S  + C C  GY G+GV C
Sbjct: 7  GCHPNATCTNTGGS--FTCTCKSGYTGDGVTC 36

This family includes a variety of EGF-like domain homologues. This family includes the C-terminal domain of the malaria parasite MSP1 protein. Length = 36

>gnl|CDD|205157 pfam12947, EGF_3, EGF domain

 Score = 35.2 bits (82), Expect = 0.001
 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)

Query: 128 CLEDRSLCGKDASCVVASQGHFHCECNEGFTGNGITC 164
           C E+   C  +A+C   + G F C C  G+TG+G+TC
Sbjct: 1   CAENNGGCHPNATCT-NTGGSFTCTCKSGYTGDGVTC 36

This family includes a variety of EGF-like domain homologues. This family includes the C-terminal domain of the malaria parasite MSP1 protein. Length = 36

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	222
KOG1214|consensus	1289		99.84
KOG1219|consensus	4289		99.54
KOG1214|consensus	1289		99.36
KOG4289|consensus	2531		99.26
KOG1219|consensus	4289		98.92
KOG4260|consensus	350		98.88
KOG4289|consensus	2531		98.73
PF07645	42	EGF_CA: Calcium-binding EGF domain; InterPro: IPR0	98.63
KOG1217|consensus	487		98.55
KOG1217|consensus	487		98.46
PF12947	36	EGF_3: EGF domain; InterPro: IPR024731 This entry	98.43
KOG1225|consensus	525		98.17
KOG4260|consensus	350		98.14
PF12947	36	EGF_3: EGF domain; InterPro: IPR024731 This entry	97.94
PF07645	42	EGF_CA: Calcium-binding EGF domain; InterPro: IPR0	97.93
smart00179	39	EGF_CA Calcium-binding EGF-like domain.	97.9
PF00008	32	EGF: EGF-like domain This is a sub-family of the P	97.85
smart00179	39	EGF_CA Calcium-binding EGF-like domain.	97.84
PF00008	32	EGF: EGF-like domain This is a sub-family of the P	97.78
PF12662	24	cEGF: Complement Clr-like EGF-like	97.74
PF12662	24	cEGF: Complement Clr-like EGF-like	97.63
PF14670	36	FXa_inhibition: Coagulation Factor Xa inhibitory s	97.53
PF06247	197	Plasmod_Pvs28: Plasmodium ookinete surface protein	97.48
cd00054	38	EGF_CA Calcium-binding EGF-like domain, present in	97.44
KOG1225|consensus	525		97.41
cd00054	38	EGF_CA Calcium-binding EGF-like domain, present in	97.28
cd00053	36	EGF Epidermal growth factor domain, found in epide	97.06
smart00181	35	EGF Epidermal growth factor-like domain.	96.95
cd00053	36	EGF Epidermal growth factor domain, found in epide	96.65
smart00181	35	EGF Epidermal growth factor-like domain.	96.62
PF12946	37	EGF_MSP1_1: MSP1 EGF domain 1; InterPro: IPR024730	96.14
cd01475	224	vWA_Matrilin VWA_Matrilin: In cartilaginous plate,	95.98
KOG1226|consensus	783		95.48
PF07974	32	EGF_2: EGF-like domain; InterPro: IPR013111 A sequ	95.47
PF12661	13	hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E	95.44
PF14670	36	FXa_inhibition: Coagulation Factor Xa inhibitory s	95.4
PF12946	37	EGF_MSP1_1: MSP1 EGF domain 1; InterPro: IPR024730	95.21
KOG1226|consensus	783		95.2
KOG0994|consensus	1758		94.51
PF07974	32	EGF_2: EGF-like domain; InterPro: IPR013111 A sequ	94.04
KOG0994|consensus	1758		93.02
PHA02887	126	EGF-like protein; Provisional	92.64
PHA03099	139	epidermal growth factor-like protein (EGF-like pro	90.09
PF06247	197	Plasmod_Pvs28: Plasmodium ookinete surface protein	90.04
smart00051	63	DSL delta serrate ligand.	89.17
cd01475	224	vWA_Matrilin VWA_Matrilin: In cartilaginous plate,	87.79
PF00954	110	S_locus_glycop: S-locus glycoprotein family; Inter	85.91
PF00954	110	S_locus_glycop: S-locus glycoprotein family; Inter	82.14

>KOG1214|consensus

Probab=99.84  E-value=6.5e-20  Score=163.11  Aligned_cols=144  Identities=30%  Similarity=0.805  Sum_probs=122.7

Q ss_pred             CCCC---CCCCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCcccCCCCCCC-CCCCCCCCEeeecCCCCCeEEecC
Q psy5752          10 LSEC---DTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPESLGCNV-VKNCHANAECVYNATSAGYRCQCA   85 (222)
Q Consensus        10 ~~~C---~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~~~~~C~~-~~~C~~~~~C~~~n~~g~~~C~C~   85 (222)
                      +++|   +.-|.-++.|...     .+..|.|.|..||.|+++ .|.+.++ |+. .+.|+.+++|+  |.+++|+|+|.
T Consensus       692 ~npCy~gsh~cdt~a~C~pg-----~~~~~tcecs~g~~gdgr-~c~d~~e-ca~~~~~CGp~s~Ci--n~pg~~rceC~  762 (1289)
T KOG1214|consen  692 VNPCYDGSHMCDTTARCHPG-----TGVDYTCECSSGYQGDGR-NCVDENE-CATGFHRCGPNSVCI--NLPGSYRCECR  762 (1289)
T ss_pred             cccceecCcccCCCccccCC-----CCcceEEEEeeccCCCCC-CCCChhh-hccCCCCCCCCceee--cCCCceeEEEe
Confidence            5667   6778888999984     555669999999999998 9998884 987 78999999997  99999999999


Q ss_pred             CCCc--cCCCeeec------CCCcCCCCCCCCC-----------------CCCCcccCCCccccCCCCCCCCCCCCCCCe
Q psy5752          86 QGYV--GNGVECHP------LKSCLEDRSLCGK-----------------DSQGYVGNGVECHPLKSCLEDRSLCGKDAS  140 (222)
Q Consensus        86 ~G~~--~~~~~C~~------~~~C~~~~~~C~~-----------------c~~g~~~~g~~C~~id~C~~~~~~C~~~~~  140 (222)
                      .||.  +++.+|..      ++.|.++.+.|..                 |.+||.+||..|.++|+|..  ..|++.+.
T Consensus       763 ~gy~F~dd~~tCV~i~~pap~n~Ce~g~h~C~i~g~a~c~~hGgs~y~C~CLPGfsGDG~~c~dvDeC~p--srChp~A~  840 (1289)
T KOG1214|consen  763 SGYEFADDRHTCVLITPPAPANPCEDGSHTCAIAGQARCVHHGGSTYSCACLPGFSGDGHQCTDVDECSP--SRCHPAAT  840 (1289)
T ss_pred             ecceeccCCcceEEecCCCCCCccccCccccCcCCceEEEecCCceEEEeecCCccCCccccccccccCc--cccCCCce
Confidence            9986  77788874      4668877666643                 78999999999999999984  45999999


Q ss_pred             eeeCCCCeeEeecCCCCccCCCccc
Q psy5752         141 CVVASQGHFHCECNEGFTGNGITCK  165 (222)
Q Consensus       141 C~n~~~g~~~C~C~~G~~gd~~~C~  165 (222)
                      |.|++ |+|.|+|.+||.|||..|.
T Consensus       841 Cyntp-gsfsC~C~pGy~GDGf~CV  864 (1289)
T KOG1214|consen  841 CYNTP-GSFSCRCQPGYYGDGFQCV  864 (1289)
T ss_pred             EecCC-CcceeecccCccCCCceec
Confidence            99998 6699999999999987663

>KOG1219|consensus

Probab=99.54  E-value=1.9e-14  Score=138.34  Aligned_cols=118  Identities=31%  Similarity=0.816  Sum_probs=98.8

Q ss_pred             CCccCC-CCC-CCCCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCcccCCCCCCCCCCCCCCCEeeecCCCCCeEE
Q psy5752           5 PIRFSL-SEC-DTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPESLGCNVVKNCHANAECVYNATSAGYRC   82 (222)
Q Consensus         5 ~~~~~~-~~C-~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~~~~~C~~~~~C~~~~~C~~~n~~g~~~C   82 (222)
                      |.|.-. ++| .+||+|+|+|...+    .++| .|.|++.|.|.   .|+...++|.+ .+|..+++|+  ...++|.|
T Consensus      3858 pgC~l~~d~C~~npCqhgG~C~~~~----~ggy-~CkCpsqysG~---~CEi~~epC~s-nPC~~GgtCi--p~~n~f~C 3926 (4289)
T KOG1219|consen 3858 PGCSLLTDPCNDNPCQHGGTCISQP----KGGY-KCKCPSQYSGN---HCEIDLEPCAS-NPCLTGGTCI--PFYNGFLC 3926 (4289)
T ss_pred             ccccccccccccCcccCCCEecCCC----CCce-EEeCcccccCc---ccccccccccC-CCCCCCCEEE--ecCCCeeE
Confidence            345433 899 89999999999975    5666 99999999999   99988888998 9999999997  67889999


Q ss_pred             ecCCCCccCCCeeecCCCcCCCCCCCCCCCCCcccCCCccccCCCCCCCCCCCCCCCeeeeCCCCeeEeecCCCCccCCC
Q psy5752          83 QCAQGYVGNGVECHPLKSCLEDRSLCGKDSQGYVGNGVECHPLKSCLEDRSLCGKDASCVVASQGHFHCECNEGFTGNGI  162 (222)
Q Consensus        83 ~C~~G~~~~~~~C~~~~~C~~~~~~C~~c~~g~~~~g~~C~~id~C~~~~~~C~~~~~C~n~~~g~~~C~C~~G~~gd~~  162 (222)
                      .|+.||+|..++  .                         ..+++|+.+.  |.++|.|+|.. |+|.|.|.+||.|  .
T Consensus      3927 nC~~gyTG~~Ce--~-------------------------~Gi~eCs~n~--C~~gg~C~n~~-gsf~CncT~g~~g--r 3974 (4289)
T KOG1219|consen 3927 NCPNGYTGKRCE--A-------------------------RGISECSKNV--CGTGGQCINIP-GSFHCNCTPGILG--R 3974 (4289)
T ss_pred             eCCCCccCceee--c-------------------------cccccccccc--ccCCceeeccC-CceEeccChhHhc--c
Confidence            999999988543  1                         0278887655  99999999997 6699999999998  4


Q ss_pred             ccc
Q psy5752         163 TCK  165 (222)
Q Consensus       163 ~C~  165 (222)
                      .|.
T Consensus      3975 ~c~ 3977 (4289)
T KOG1219|consen 3975 TCC 3977 (4289)
T ss_pred             cCc
Confidence            543

>KOG1214|consensus

Probab=99.36  E-value=3.3e-12  Score=114.66  Aligned_cols=130  Identities=26%  Similarity=0.595  Sum_probs=106.9

Q ss_pred             CCCCCCCCEeeecCCCCCeEEecCCCCccCCCeeecCCCcCCCCCCCCC--------------CCCCc--ccCCCcccc-
Q psy5752          62 VKNCHANAECVYNATSAGYRCQCAQGYVGNGVECHPLKSCLEDRSLCGK--------------DSQGY--VGNGVECHP-  124 (222)
Q Consensus        62 ~~~C~~~~~C~~~n~~g~~~C~C~~G~~~~~~~C~~~~~C~~~~~~C~~--------------c~~g~--~~~g~~C~~-  124 (222)
                      .+.|..++.|+ ..+.-.|+|.|..||.|+++.|.++++|.+.++.|+.              |..||  ..++.+|.. 
T Consensus       699 sh~cdt~a~C~-pg~~~~~tcecs~g~~gdgr~c~d~~eca~~~~~CGp~s~Cin~pg~~rceC~~gy~F~dd~~tCV~i  777 (1289)
T KOG1214|consen  699 SHMCDTTARCH-PGTGVDYTCECSSGYQGDGRNCVDENECATGFHRCGPNSVCINLPGSYRCECRSGYEFADDRHTCVLI  777 (1289)
T ss_pred             CcccCCCcccc-CCCCcceEEEEeeccCCCCCCCCChhhhccCCCCCCCCceeecCCCceeEEEeecceeccCCcceEEe
Confidence            36788888897 2555689999999999999999999999999888865              44555  467778874 


Q ss_pred             -----CCCCCCCCCCCCC--CCeeeeCCCCeeEeecCCCCccCCCccccCCCCC------CCeeeecCCcEEEEcCCCCC
Q psy5752         125 -----LKSCLEDRSLCGK--DASCVVASQGHFHCECNEGFTGNGITCKPVRKKE------SDFLLVNQGMFMLRVPYQPT  191 (222)
Q Consensus       125 -----id~C~~~~~~C~~--~~~C~n~~~g~~~C~C~~G~~gd~~~C~~~~~~~------~~~~~~~~g~~~~~~~~~~~  191 (222)
                           ++.|.++.+.|.-  .+.|+...+++|.|.|.+||.|||..|.++++|.      .++|.++.|++.|+|..++.
T Consensus       778 ~~pap~n~Ce~g~h~C~i~g~a~c~~hGgs~y~C~CLPGfsGDG~~c~dvDeC~psrChp~A~CyntpgsfsC~C~pGy~  857 (1289)
T KOG1214|consen  778 TPPAPANPCEDGSHTCAIAGQARCVHHGGSTYSCACLPGFSGDGHQCTDVDECSPSRCHPAATCYNTPGSFSCRCQPGYY  857 (1289)
T ss_pred             cCCCCCCccccCccccCcCCceEEEecCCceEEEeecCCccCCccccccccccCccccCCCceEecCCCcceeecccCcc
Confidence                 4678888788964  4567788788899999999999999999998875      45799999999999987666


Q ss_pred             C
Q psy5752         192 R  192 (222)
Q Consensus       192 ~  192 (222)
                      +
T Consensus       858 G  858 (1289)
T KOG1214|consen  858 G  858 (1289)
T ss_pred             C
Confidence            4

>KOG4289|consensus

Probab=99.26  E-value=7.1e-12  Score=117.46  Aligned_cols=122  Identities=29%  Similarity=0.695  Sum_probs=92.0

Q ss_pred             cCCCCC-CCCCCCCCeecCCCC-----------------CCCCCCceeeecCCCCccCCCCCcccCCCCCCCCCCCCCCC
Q psy5752           8 FSLSEC-DTPCHPNAQCTSPDE-----------------FNESREQAKCICNFGYTGDGVTECNPESLGCNVVKNCHANA   69 (222)
Q Consensus         8 ~~~~~C-~~~C~~~~~C~~~~~-----------------~~~~g~~~~C~C~~G~~g~~~~~C~~~~~~C~~~~~C~~~~   69 (222)
                      +|-+.| ..||.|..+|+.+-.                 -++.+++ .|+|++||+|+   .|+...++|.+ .+|.+++
T Consensus      1177 fdDniClrEPCenymkCvsvlrFdssapf~~s~s~lfRpi~pvngl-rCrCPpGFTgd---~CeTeiDlCYs-~pC~nng 1251 (2531)
T KOG4289|consen 1177 FDDNICLREPCENYMKCVSVLRFDSSAPFLASDSVLFRPIHPVNGL-RCRCPPGFTGD---YCETEIDLCYS-GPCGNNG 1251 (2531)
T ss_pred             ccCchhhcchhHHHHhhhhheeecccCccccccceeeeeccccCce-eEeCCCCCCcc---cccchhHhhhc-CCCCCCC
Confidence            455678 889999998875300                 0113445 89999999999   99977778998 9999999


Q ss_pred             EeeecCCCCCeEEecCCCCccCCCeeecCCCcCCCCCCCCCCCCCcccCCCccccCCCCCCCCCCCCCCCeeeeCCCCee
Q psy5752          70 ECVYNATSAGYRCQCAQGYVGNGVECHPLKSCLEDRSLCGKDSQGYVGNGVECHPLKSCLEDRSLCGKDASCVVASQGHF  149 (222)
Q Consensus        70 ~C~~~n~~g~~~C~C~~G~~~~~~~C~~~~~C~~~~~~C~~c~~g~~~~g~~C~~id~C~~~~~~C~~~~~C~n~~~g~~  149 (222)
                      .|.  ...|+|+|.|.+||+|..++- +                         ...-.|.  |+.|.++++|+|...|.|
T Consensus      1252 ~C~--srEggYtCeCrpg~tGehCEv-s-------------------------~~agrCv--pGvC~nggtC~~~~nggf 1301 (2531)
T KOG4289|consen 1252 RCR--SREGGYTCECRPGFTGEHCEV-S-------------------------ARAGRCV--PGVCKNGGTCVNLLNGGF 1301 (2531)
T ss_pred             ceE--EecCceeEEecCCccccceee-e-------------------------cccCccc--cceecCCCEEeecCCCce
Confidence            996  788999999999999885430 0                         0122344  567999999999988889


Q ss_pred             EeecCCCCccCCCccc
Q psy5752         150 HCECNEGFTGNGITCK  165 (222)
Q Consensus       150 ~C~C~~G~~gd~~~C~  165 (222)
                      .|.|+.| .-.+..|+
T Consensus      1302 ~c~Cp~g-e~e~prC~ 1316 (2531)
T KOG4289|consen 1302 CCHCPYG-EFEDPRCE 1316 (2531)
T ss_pred             eccCCCc-ccCCCceE
Confidence            9999998 32224555

>KOG1219|consensus

Probab=98.92  E-value=4.5e-09  Score=102.64  Aligned_cols=107  Identities=25%  Similarity=0.624  Sum_probs=84.0

Q ss_pred             CcccCCCCCCCCCCCCCCCEeeecCCCCCeEEecCCCCccCCCeeecCCCcCCCCCCCCCCCCCcccCCCccccCCCCCC
Q psy5752          51 ECNPESLGCNVVKNCHANAECVYNATSAGYRCQCAQGYVGNGVECHPLKSCLEDRSLCGKDSQGYVGNGVECHPLKSCLE  130 (222)
Q Consensus        51 ~C~~~~~~C~~~~~C~~~~~C~~~n~~g~~~C~C~~G~~~~~~~C~~~~~C~~~~~~C~~c~~g~~~~g~~C~~id~C~~  130 (222)
                      .|....+.|.. .+|++++.|. ....++|.|+|++-|+|+.++                            .++.+|..
T Consensus      3859 gC~l~~d~C~~-npCqhgG~C~-~~~~ggy~CkCpsqysG~~CE----------------------------i~~epC~s 3908 (4289)
T KOG1219|consen 3859 GCSLLTDPCND-NPCQHGGTCI-SQPKGGYKCKCPSQYSGNHCE----------------------------IDLEPCAS 3908 (4289)
T ss_pred             ccccccccccc-CcccCCCEec-CCCCCceEEeCcccccCcccc----------------------------cccccccC
Confidence            45544346888 9999999997 355678999999999888432                            25788987


Q ss_pred             CCCCCCCCCeeeeCCCCeeEeecCCCCccCCCcccc--CCCC------CCCeeeecCCcEEEEcCCCCCC
Q psy5752         131 DRSLCGKDASCVVASQGHFHCECNEGFTGNGITCKP--VRKK------ESDFLLVNQGMFMLRVPYQPTR  192 (222)
Q Consensus       131 ~~~~C~~~~~C~n~~~g~~~C~C~~G~~gd~~~C~~--~~~~------~~~~~~~~~g~~~~~~~~~~~~  192 (222)
                      +|  |..+++|+...+| |.|.|+.||+|  .+|+.  +++|      .++.|.+..|+|.|.|..+..+
T Consensus      3909 nP--C~~GgtCip~~n~-f~CnC~~gyTG--~~Ce~~Gi~eCs~n~C~~gg~C~n~~gsf~CncT~g~~g 3973 (4289)
T KOG1219|consen 3909 NP--CLTGGTCIPFYNG-FLCNCPNGYTG--KRCEARGISECSKNVCGTGGQCINIPGSFHCNCTPGILG 3973 (4289)
T ss_pred             CC--CCCCCEEEecCCC-eeEeCCCCccC--ceeecccccccccccccCCceeeccCCceEeccChhHhc
Confidence            76  9999999998766 99999999998  56653  3444      4667999999999999865553

>KOG4260|consensus

Probab=98.88  E-value=6.7e-09  Score=82.98  Aligned_cols=145  Identities=23%  Similarity=0.475  Sum_probs=100.2

Q ss_pred             eecCCCCccCCCCCcccCCCCCCCCCCCCCCCEeee-cCCCCCeEEecCCCCccCCCe-e----------------ecC-
Q psy5752          38 CICNFGYTGDGVTECNPESLGCNVVKNCHANAECVY-NATSAGYRCQCAQGYVGNGVE-C----------------HPL-   98 (222)
Q Consensus        38 C~C~~G~~g~~~~~C~~~~~~C~~~~~C~~~~~C~~-~n~~g~~~C~C~~G~~~~~~~-C----------------~~~-   98 (222)
                      --|++|-.|.+--.|....     ..+|.-++.|.- -...|+-.|.|..||.|+.+. |                ..- 
T Consensus       130 vCCp~gtyGpdCl~Cpggs-----er~C~GnG~C~GdGsR~GsGkCkC~~GY~Gp~C~~Cg~eyfes~Rne~~lvCt~Ch  204 (350)
T KOG4260|consen  130 VCCPDGTYGPDCLQCPGGS-----ERPCFGNGSCHGDGSREGSGKCKCETGYTGPLCRYCGIEYFESSRNEQHLVCTACH  204 (350)
T ss_pred             eccCCCCcCCccccCCCCC-----cCCcCCCCcccCCCCCCCCCcccccCCCCCccccccchHHHHhhcccccchhhhhh
Confidence            3478888887222333322     267877888841 012456789999999987532 1                110 


Q ss_pred             ----CCcC-CCCCCCCCCCCCcccCCCccccCCCCCCCCCCCCCCCeeeeCCCCeeEeecCCCCccCCCc---cccCCCC
Q psy5752          99 ----KSCL-EDRSLCGKDSQGYVGNGVECHPLKSCLEDRSLCGKDASCVVASQGHFHCECNEGFTGNGIT---CKPVRKK  170 (222)
Q Consensus        99 ----~~C~-~~~~~C~~c~~g~~~~g~~C~~id~C~~~~~~C~~~~~C~n~~~g~~~C~C~~G~~gd~~~---C~~~~~~  170 (222)
                          .-|. ..+..|..|..||..+-..|.|||||...+..|.....|+|+. |+|+|.+.+||.++...   |.++-..
T Consensus       205 ~~C~~~Csg~~~k~C~kCkkGW~lde~gCvDvnEC~~ep~~c~~~qfCvNte-GSf~C~dk~Gy~~g~d~C~~~~d~~~~  283 (350)
T KOG4260|consen  205 EGCLGVCSGESSKGCSKCKKGWKLDEEGCVDVNECQNEPAPCKAHQFCVNTE-GSFKCEDKEGYKKGVDECQFCADVCAS  283 (350)
T ss_pred             hhhhcccCCCCCCChhhhcccceecccccccHHHHhcCCCCCChhheeecCC-CceEecccccccCChHHhhhhhhhccc
Confidence                0122 2345677789999988889999999998888898888999996 77999999999973222   3344444


Q ss_pred             CCCeeeecCCcEEEEcCC
Q psy5752         171 ESDFLLVNQGMFMLRVPY  188 (222)
Q Consensus       171 ~~~~~~~~~g~~~~~~~~  188 (222)
                      ....|.++.+.+.+.+..
T Consensus       284 kn~~c~ni~~~~r~v~f~  301 (350)
T KOG4260|consen  284 KNRPCMNIDGQYRCVCFS  301 (350)
T ss_pred             CCCCcccCCccEEEEecc
Confidence            556789999999888764

>KOG4289|consensus

Probab=98.73  E-value=2.6e-08  Score=94.30  Aligned_cols=69  Identities=30%  Similarity=0.788  Sum_probs=58.6

Q ss_pred             cCCCCC-CCCCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCcccCC--CCCCCCCCCCCCCEeeecCCCCCeEEec
Q psy5752           8 FSLSEC-DTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPES--LGCNVVKNCHANAECVYNATSAGYRCQC   84 (222)
Q Consensus         8 ~~~~~C-~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~~~--~~C~~~~~C~~~~~C~~~n~~g~~~C~C   84 (222)
                      ++||.| +.||.+|+.|..  .   .|+| .|.|.+||+|.   .|+...  ..|.+ ..|.++++|+ ....|+|.|.|
T Consensus      1237 TeiDlCYs~pC~nng~C~s--r---EggY-tCeCrpg~tGe---hCEvs~~agrCvp-GvC~nggtC~-~~~nggf~c~C 1305 (2531)
T KOG4289|consen 1237 TEIDLCYSGPCGNNGRCRS--R---EGGY-TCECRPGFTGE---HCEVSARAGRCVP-GVCKNGGTCV-NLLNGGFCCHC 1305 (2531)
T ss_pred             chhHhhhcCCCCCCCceEE--e---cCce-eEEecCCcccc---ceeeecccCcccc-ceecCCCEEe-ecCCCceeccC
Confidence            368999 999999999999  4   7888 99999999999   998443  23776 9999999998 45678899999


Q ss_pred             CCC
Q psy5752          85 AQG   87 (222)
Q Consensus        85 ~~G   87 (222)
                      +.|
T Consensus      1306 p~g 1308 (2531)
T KOG4289|consen 1306 PYG 1308 (2531)
T ss_pred             CCc
Confidence            988

>PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins

Probab=98.63  E-value=4.6e-08  Score=57.27  Aligned_cols=34  Identities=26%  Similarity=0.845  Sum_probs=31.0

Q ss_pred             cCCCCCCCCCCCCCCCeeeeCCCCeeEeecCCCCc
Q psy5752         124 PLKSCLEDRSLCGKDASCVVASQGHFHCECNEGFT  158 (222)
Q Consensus       124 ~id~C~~~~~~C~~~~~C~n~~~g~~~C~C~~G~~  158 (222)
                      |||||+..++.|..++.|+|+. |+|+|.|++||.
T Consensus         1 DidEC~~~~~~C~~~~~C~N~~-Gsy~C~C~~Gy~   34 (42)
T PF07645_consen    1 DIDECAEGPHNCPENGTCVNTE-GSYSCSCPPGYE   34 (42)
T ss_dssp             ESSTTTTTSSSSSTTSEEEEET-TEEEEEESTTEE
T ss_pred             CccccCCCCCcCCCCCEEEcCC-CCEEeeCCCCcE
Confidence            6899998888998889999997 669999999998

Many of these proteins require calcium for their biological function and a calcium-binding site has been found at the N terminus of some EGF-like domains []. Calcium-binding may be crucial for numerous protein-protein interactions. For human coagulation factor IX it has been shown [] that the calcium-ligands form a pentagonal bipyramid. The first, third and fourth conserved negatively charged or polar residues are side chain ligands. The latter is possibly hydroxylated (see aspartic acid and asparagine hydroxylation site) []. A conserved aromatic residue, as well as the second conserved negative residue, are thought to be involved in stabilising the calcium-binding site. As in non-calcium binding EGF-like domains, there are six conserved cysteines and the structure of both types is very similar as calcium-binding induces only strictly local structural changes []. +------------------+ +---------+ | | | | nxnnC-x(3,14)-C-x(3,7)-CxxbxxxxaxC-x(1,6)-C-x(8,13)-Cx | | +------------------+ 'n': negatively charged or polar residue [DEQN] 'b': possibly beta-hydroxylated residue [DN] 'a': aromatic amino acid 'C': cysteine, involved in disulphide bond 'x': any amino acid. ; GO: 0005509 calcium ion binding; PDB: 2VJ3_A 1TOZ_A 1LMJ_A 1UZQ_A 1UZK_A 1UZJ_B 1UZP_A 1EMO_A 1EMN_A 2RR0_A ....

>KOG1217|consensus

Probab=98.55  E-value=1.6e-06  Score=76.30  Aligned_cols=167  Identities=29%  Similarity=0.706  Sum_probs=112.2

Q ss_pred             CCC---CCCCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCcccC-------------------CCCCCC-CCCCCC
Q psy5752          11 SEC---DTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPE-------------------SLGCNV-VKNCHA   67 (222)
Q Consensus        11 ~~C---~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~~-------------------~~~C~~-~~~C~~   67 (222)
                      ++|   ..+|.+++.|.+.     .+.| .|.|++||.+.   .|+..                   ...|.. ...|..
T Consensus       170 ~~C~~~~~~c~~~~~C~~~-----~~~~-~C~c~~~~~~~---~~~~~~~~~~c~~~~~~~~~~g~~~~~c~~~~~~~~~  240 (487)
T KOG1217|consen  170 DECIQYSSPCQNGGTCVNT-----GGSY-LCSCPPGYTGS---TCETTGNGGTCVDSVACSCPPGARGPECEVSIVECAS  240 (487)
T ss_pred             cccccCCCCcCCCcccccC-----CCCe-eEeCCCCccCC---cCcCCCCCceEecceeccCCCCCCCCCcccccccccC
Confidence            577   3459999999994     4555 99999999987   33322                   111222 233433


Q ss_pred             C-CEeeecCCCCCeEEecCCCCccCC-CeeecCCCcCCCCCCCCC--------------CCCCcccCCC-ccccCCCCCC
Q psy5752          68 N-AECVYNATSAGYRCQCAQGYVGNG-VECHPLKSCLEDRSLCGK--------------DSQGYVGNGV-ECHPLKSCLE  130 (222)
Q Consensus        68 ~-~~C~~~n~~g~~~C~C~~G~~~~~-~~C~~~~~C~~~~~~C~~--------------c~~g~~~~g~-~C~~id~C~~  130 (222)
                      . +.|+  +..++|+|.|++||.+.. ..+.++++|..... |.+              |..||.+..- .+.+..+|..
T Consensus       241 ~~~~c~--~~~~~~~C~~~~g~~~~~~~~~~~~~~C~~~~~-c~~~~~C~~~~~~~~C~C~~g~~g~~~~~~~~~~~C~~  317 (487)
T KOG1217|consen  241 GDGTCV--NTVGSYTCRCPEGYTGDACVTCVDVDSCALIAS-CPNGGTCVNVPGSYRCTCPPGFTGRLCTECVDVDECSP  317 (487)
T ss_pred             CCCccc--ccCCceeeeCCCCccccccceeeeccccCCCCc-cCCCCeeecCCCcceeeCCCCCCCCCCccccccccccc
Confidence            3 7885  888899999999999887 57788888876543 322              6788876642 4556678852


Q ss_pred             --CCCCCCCCCeee--eCCCCeeEeecCCCCccCCCccccCC-CC------CCCeeee-cCCcEEEEcCCCCCC
Q psy5752         131 --DRSLCGKDASCV--VASQGHFHCECNEGFTGNGITCKPVR-KK------ESDFLLV-NQGMFMLRVPYQPTR  192 (222)
Q Consensus       131 --~~~~C~~~~~C~--n~~~g~~~C~C~~G~~gd~~~C~~~~-~~------~~~~~~~-~~g~~~~~~~~~~~~  192 (222)
                        ....|.++++|.  +.. +.+.|.|..||.|  ..|+... ++      ....+.+ +.+.+.|.++....+
T Consensus       318 ~~~~~~c~~g~~C~~~~~~-~~~~C~c~~~~~g--~~C~~~~~~C~~~~~~~~~~c~~~~~~~~~c~~~~~~~~  388 (487)
T KOG1217|consen  318 RNAGGPCANGGTCNTLGSF-GGFRCACGPGFTG--RRCEDSNDECASSPCCPGGTCVNETPGSYRCACPAGFAG  388 (487)
T ss_pred             cccCCcCCCCcccccCCCC-CCCCcCCCCCCCC--CccccCCccccCCccccCCEeccCCCCCeEecCCCcccc
Confidence              344588777882  222 3478999999776  6666552 33      3445777 789999998876443

>KOG1217|consensus

Probab=98.46  E-value=3.5e-06  Score=74.13  Aligned_cols=155  Identities=26%  Similarity=0.638  Sum_probs=108.3

Q ss_pred             CeecCCCCCCCCCCceeeecCCCCccCCCCCcccCCCCCCCCCCCCCCCEeeecCCCCCeEEecCCCCccCCC-eeecCC
Q psy5752          21 AQCTSPDEFNESREQAKCICNFGYTGDGVTECNPESLGCNVVKNCHANAECVYNATSAGYRCQCAQGYVGNGV-ECHPLK   99 (222)
Q Consensus        21 ~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~~~~~C~~~~~C~~~~~C~~~n~~g~~~C~C~~G~~~~~~-~C~~~~   99 (222)
                      +.|++.     .+.+ .|.|++||++.....|.+++. |.....|.+++.|+  +..+.|.|.|++||.+... .+.+..
T Consensus       243 ~~c~~~-----~~~~-~C~~~~g~~~~~~~~~~~~~~-C~~~~~c~~~~~C~--~~~~~~~C~C~~g~~g~~~~~~~~~~  313 (487)
T KOG1217|consen  243 GTCVNT-----VGSY-TCRCPEGYTGDACVTCVDVDS-CALIASCPNGGTCV--NVPGSYRCTCPPGFTGRLCTECVDVD  313 (487)
T ss_pred             Cccccc-----CCce-eeeCCCCccccccceeeeccc-cCCCCccCCCCeee--cCCCcceeeCCCCCCCCCCccccccc
Confidence            789884     5566 999999999984114666664 88722388899996  7888899999999998875 556666


Q ss_pred             CcCC--CCC------CC--------CCCCCCcccCCCccccC-CCCCCCCCCCCCCCeeee-CCCCeeEeecCCCCcc--
Q psy5752         100 SCLE--DRS------LC--------GKDSQGYVGNGVECHPL-KSCLEDRSLCGKDASCVV-ASQGHFHCECNEGFTG--  159 (222)
Q Consensus       100 ~C~~--~~~------~C--------~~c~~g~~~~g~~C~~i-d~C~~~~~~C~~~~~C~n-~~~g~~~C~C~~G~~g--  159 (222)
                      +|..  ...      .|        ..|..++...+..|+.. ++|...+  +..++.|++ .. ++|.|.|+.+|.+  
T Consensus       314 ~C~~~~~~~~c~~g~~C~~~~~~~~~~C~c~~~~~g~~C~~~~~~C~~~~--~~~~~~c~~~~~-~~~~c~~~~~~~~~~  390 (487)
T KOG1217|consen  314 ECSPRNAGGPCANGGTCNTLGSFGGFRCACGPGFTGRRCEDSNDECASSP--CCPGGTCVNETP-GSYRCACPAGFAGKA  390 (487)
T ss_pred             cccccccCCcCCCCcccccCCCCCCCCcCCCCCCCCCccccCCccccCCc--cccCCEeccCCC-CCeEecCCCccccCC
Confidence            7752  111      22        11222222466689888 4998655  777889998 54 5599999999885  


Q ss_pred             --CCCccccCCCCC-CCeeeecCCcEEEEcCC
Q psy5752         160 --NGITCKPVRKKE-SDFLLVNQGMFMLRVPY  188 (222)
Q Consensus       160 --d~~~C~~~~~~~-~~~~~~~~g~~~~~~~~  188 (222)
                        ++..+.+++++. ...+++..+.+.|. +.
T Consensus       391 ~~~~~~~~~~~~c~~~~~c~~~~~~~~c~-~~  421 (487)
T KOG1217|consen  391 NGDGVGCEDIDECSGCGDCVNGPGGGACT-PP  421 (487)
T ss_pred             ccccccccccccccCCcceeccCCCCccc-cC
Confidence              345677777775 34466667777766 55

>PF12947 EGF_3: EGF domain; InterPro: IPR024731 This entry represents an EGF domain found in the the C terminus of malarial parasite merozoite surface protein 1 [], as well as other proteins

Probab=98.43  E-value=1.4e-07  Score=53.07  Aligned_cols=36  Identities=33%  Similarity=0.995  Sum_probs=27.8

Q ss_pred             CCCCCCCCCCCCeeeeCCCCeeEeecCCCCccCCCcc
Q psy5752         128 CLEDRSLCGKDASCVVASQGHFHCECNEGFTGNGITC  164 (222)
Q Consensus       128 C~~~~~~C~~~~~C~n~~~g~~~C~C~~G~~gd~~~C  164 (222)
                      |+.+++.|+.+|+|+++++ +|.|+|.+||.|||..|
T Consensus         1 C~~~~~~C~~nA~C~~~~~-~~~C~C~~Gy~GdG~~C   36 (36)
T PF12947_consen    1 CLENNGGCHPNATCTNTGG-SYTCTCKPGYEGDGFFC   36 (36)
T ss_dssp             TTTGGGGS-TTCEEEE-TT-SEEEEE-CEEECCSTCE
T ss_pred             CCCCCCCCCCCcEeecCCC-CEEeECCCCCccCCcCC
Confidence            4455677999999999975 69999999999999876

; PDB: 2NPR_A 1N1I_C 1B9W_A 1YO8_A 2RHP_A.

>KOG1225|consensus

Probab=98.17  E-value=2.5e-05  Score=69.29  Aligned_cols=44  Identities=41%  Similarity=1.115  Sum_probs=29.8

Q ss_pred             eeecCCCCccCCCCCcccCCCCCCCCCCCCCCCEeeecCCCCCeEEecCCCCccCCC
Q psy5752          37 KCICNFGYTGDGVTECNPESLGCNVVKNCHANAECVYNATSAGYRCQCAQGYVGNGV   93 (222)
Q Consensus        37 ~C~C~~G~~g~~~~~C~~~~~~C~~~~~C~~~~~C~~~n~~g~~~C~C~~G~~~~~~   93 (222)
                      .|+|++||+|.   .|....  |..  .|+.+..++    .+  .|.|++||.|..+
T Consensus       266 ~CIC~~Gf~G~---dC~e~~--Cp~--~cs~~g~~~----~g--~CiC~~g~~G~dC  309 (525)
T KOG1225|consen  266 RCICPPGFTGD---DCDELV--CPV--DCSGGGVCV----DG--ECICNPGYSGKDC  309 (525)
T ss_pred             eEeCCCCCcCC---CCCccc--CCc--ccCCCceec----CC--EeecCCCcccccc
Confidence            68888888888   776643  654  376666563    22  7888888877644

>KOG4260|consensus

Probab=98.14  E-value=2.3e-06  Score=68.73  Aligned_cols=130  Identities=25%  Similarity=0.648  Sum_probs=82.7

Q ss_pred             CCCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCcccC-----CCC----CCC-CCCCCCCCEeeecCCCCCeEE-e
Q psy5752          15 TPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPE-----SLG----CNV-VKNCHANAECVYNATSAGYRC-Q   83 (222)
Q Consensus        15 ~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~~-----~~~----C~~-~~~C~~~~~C~~~n~~g~~~C-~   83 (222)
                      .||.-+|.|....++  .|+. +|.|.+||+|.--+.|...     .++    |.. ...|  .+.|   ....+-.| +
T Consensus       150 r~C~GnG~C~GdGsR--~GsG-kCkC~~GY~Gp~C~~Cg~eyfes~Rne~~lvCt~Ch~~C--~~~C---sg~~~k~C~k  221 (350)
T KOG4260|consen  150 RPCFGNGSCHGDGSR--EGSG-KCKCETGYTGPLCRYCGIEYFESSRNEQHLVCTACHEGC--LGVC---SGESSKGCSK  221 (350)
T ss_pred             CCcCCCCcccCCCCC--CCCC-cccccCCCCCccccccchHHHHhhcccccchhhhhhhhh--hccc---CCCCCCChhh
Confidence            578888899875441  2455 8999999999822222211     000    111 1233  2256   34444455 6


Q ss_pred             cCCCCccCCCeeecCCCcCCCCCCCCC--------------CCCCcccCCCccccCCCCCCCCCCCC-CCCeeeeCCCCe
Q psy5752          84 CAQGYVGNGVECHPLKSCLEDRSLCGK--------------DSQGYVGNGVECHPLKSCLEDRSLCG-KDASCVVASQGH  148 (222)
Q Consensus        84 C~~G~~~~~~~C~~~~~C~~~~~~C~~--------------c~~g~~~~g~~C~~id~C~~~~~~C~-~~~~C~n~~~g~  148 (222)
                      |+.||..+...|.|||+|+..+..|..              +.+||..      ++|+|..-...|. .+..|+|+. +.
T Consensus       222 CkkGW~lde~gCvDvnEC~~ep~~c~~~qfCvNteGSf~C~dk~Gy~~------g~d~C~~~~d~~~~kn~~c~ni~-~~  294 (350)
T KOG4260|consen  222 CKKGWKLDEEGCVDVNECQNEPAPCKAHQFCVNTEGSFKCEDKEGYKK------GVDECQFCADVCASKNRPCMNID-GQ  294 (350)
T ss_pred             hcccceecccccccHHHHhcCCCCCChhheeecCCCceEecccccccC------ChHHhhhhhhhcccCCCCcccCC-cc
Confidence            999999888889999999988877754              1233322      2677765333453 356899997 55


Q ss_pred             eEeecCCCCcc
Q psy5752         149 FHCECNEGFTG  159 (222)
Q Consensus       149 ~~C~C~~G~~g  159 (222)
                      |+|.|..|+.-
T Consensus       295 ~r~v~f~~~~~  305 (350)
T KOG4260|consen  295 YRCVCFSGLII  305 (350)
T ss_pred             EEEEeccccee
Confidence            99999999873

>PF12947 EGF_3: EGF domain; InterPro: IPR024731 This entry represents an EGF domain found in the the C terminus of malarial parasite merozoite surface protein 1 [], as well as other proteins

Probab=97.94  E-value=5e-06  Score=46.73  Aligned_cols=31  Identities=45%  Similarity=1.115  Sum_probs=24.8

Q ss_pred             CCCCCCCEeeecCCCCCeEEecCCCCccCCCee
Q psy5752          63 KNCHANAECVYNATSAGYRCQCAQGYVGNGVEC   95 (222)
Q Consensus        63 ~~C~~~~~C~~~n~~g~~~C~C~~G~~~~~~~C   95 (222)
                      +.|+.+|+|+  ++.++|.|+|++||.|++..|
T Consensus         6 ~~C~~nA~C~--~~~~~~~C~C~~Gy~GdG~~C   36 (36)
T PF12947_consen    6 GGCHPNATCT--NTGGSYTCTCKPGYEGDGFFC   36 (36)
T ss_dssp             GGS-TTCEEE--E-TTSEEEEE-CEEECCSTCE
T ss_pred             CCCCCCcEee--cCCCCEEeECCCCCccCCcCC
Confidence            6788899997  888899999999999998754

; PDB: 2NPR_A 1N1I_C 1B9W_A 1YO8_A 2RHP_A.

>PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins

Probab=97.93  E-value=3.9e-06  Score=49.00  Aligned_cols=31  Identities=29%  Similarity=0.775  Sum_probs=27.7

Q ss_pred             CCCCC---CCCCCCCCeecCCCCCCCCCCceeeecCCCCc
Q psy5752           9 SLSEC---DTPCHPNAQCTSPDEFNESREQAKCICNFGYT   45 (222)
Q Consensus         9 ~~~~C---~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~   45 (222)
                      |||||   .+.|..++.|+|  +   .|+| .|.|++||.
T Consensus         1 DidEC~~~~~~C~~~~~C~N--~---~Gsy-~C~C~~Gy~   34 (42)
T PF07645_consen    1 DIDECAEGPHNCPENGTCVN--T---EGSY-SCSCPPGYE   34 (42)
T ss_dssp             ESSTTTTTSSSSSTTSEEEE--E---TTEE-EEEESTTEE
T ss_pred             CccccCCCCCcCCCCCEEEc--C---CCCE-EeeCCCCcE
Confidence            78999   468998999999  4   7888 999999998

Many of these proteins require calcium for their biological function and a calcium-binding site has been found at the N terminus of some EGF-like domains []. Calcium-binding may be crucial for numerous protein-protein interactions. For human coagulation factor IX it has been shown [] that the calcium-ligands form a pentagonal bipyramid. The first, third and fourth conserved negatively charged or polar residues are side chain ligands. The latter is possibly hydroxylated (see aspartic acid and asparagine hydroxylation site) []. A conserved aromatic residue, as well as the second conserved negative residue, are thought to be involved in stabilising the calcium-binding site. As in non-calcium binding EGF-like domains, there are six conserved cysteines and the structure of both types is very similar as calcium-binding induces only strictly local structural changes []. +------------------+ +---------+ | | | | nxnnC-x(3,14)-C-x(3,7)-CxxbxxxxaxC-x(1,6)-C-x(8,13)-Cx | | +------------------+ 'n': negatively charged or polar residue [DEQN] 'b': possibly beta-hydroxylated residue [DN] 'a': aromatic amino acid 'C': cysteine, involved in disulphide bond 'x': any amino acid. ; GO: 0005509 calcium ion binding; PDB: 2VJ3_A 1TOZ_A 1LMJ_A 1UZQ_A 1UZK_A 1UZJ_B 1UZP_A 1EMO_A 1EMN_A 2RR0_A ....

>smart00179 EGF_CA Calcium-binding EGF-like domain

Probab=97.90  E-value=2.3e-05  Score=44.56  Aligned_cols=38  Identities=29%  Similarity=0.882  Sum_probs=29.0

Q ss_pred             cCCCCCCCCCCCCCCCeeeeCCCCeeEeecCCCCccCCCcc
Q psy5752         124 PLKSCLEDRSLCGKDASCVVASQGHFHCECNEGFTGNGITC  164 (222)
Q Consensus       124 ~id~C~~~~~~C~~~~~C~n~~~g~~~C~C~~G~~gd~~~C  164 (222)
                      ++++|... ..|.++++|+++.++ |.|.|++||. ++..|
T Consensus         1 d~~~C~~~-~~C~~~~~C~~~~g~-~~C~C~~g~~-~g~~C   38 (39)
T smart00179        1 DIDECASG-NPCQNGGTCVNTVGS-YRCECPPGYT-DGRNC   38 (39)
T ss_pred             CcccCcCC-CCcCCCCEeECCCCC-eEeECCCCCc-cCCcC
Confidence            36778753 459888899999754 9999999998 33555

>PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=97.85  E-value=4.9e-06  Score=45.57  Aligned_cols=29  Identities=31%  Similarity=0.762  Sum_probs=24.3

Q ss_pred             CCCCCCCCeecCCCCCCCCCCceeeecCCCCccC
Q psy5752          14 DTPCHPNAQCTSPDEFNESREQAKCICNFGYTGD   47 (222)
Q Consensus        14 ~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~   47 (222)
                      ++||.|+|+|+...    .+.| +|.|++||+|+
T Consensus         3 ~~~C~n~g~C~~~~----~~~y-~C~C~~G~~G~   31 (32)
T PF00008_consen    3 SNPCQNGGTCIDLP----GGGY-TCECPPGYTGK   31 (32)
T ss_dssp             TTSSTTTEEEEEES----TSEE-EEEEBTTEEST
T ss_pred             CCcCCCCeEEEeCC----CCCE-EeECCCCCccC
Confidence            67999999999942    2566 99999999986

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length.; GO: 0005515 protein binding; PDB: 1WHE_A 1CCF_A 1APO_A 1WHF_A 2VJ3_A 1TOZ_A 4D90_B 3CFW_A 1EDM_B 1IXA_A ....

>smart00179 EGF_CA Calcium-binding EGF-like domain

Probab=97.84  E-value=2.6e-05  Score=44.34  Aligned_cols=33  Identities=33%  Similarity=0.916  Sum_probs=27.8

Q ss_pred             CCCCC-C-CCCCCCCeecCCCCCCCCCCceeeecCCCCc-cC
Q psy5752           9 SLSEC-D-TPCHPNAQCTSPDEFNESREQAKCICNFGYT-GD   47 (222)
Q Consensus         9 ~~~~C-~-~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~-g~   47 (222)
                      ++++| . .+|.++++|++.     .++| .|.|++||. |.
T Consensus         1 d~~~C~~~~~C~~~~~C~~~-----~g~~-~C~C~~g~~~g~   36 (39)
T smart00179        1 DIDECASGNPCQNGGTCVNT-----VGSY-RCECPPGYTDGR   36 (39)
T ss_pred             CcccCcCCCCcCCCCEeECC-----CCCe-EeECCCCCccCC
Confidence            57899 5 799999999994     6666 999999999 65

>PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=97.78  E-value=2.3e-05  Score=42.87  Aligned_cols=27  Identities=33%  Similarity=0.960  Sum_probs=23.6

Q ss_pred             CCCCCCeeeeCCCCeeEeecCCCCccC
Q psy5752         134 LCGKDASCVVASQGHFHCECNEGFTGN  160 (222)
Q Consensus       134 ~C~~~~~C~n~~~g~~~C~C~~G~~gd  160 (222)
                      +|.++++|++...+.|.|.|++||+|+
T Consensus         5 ~C~n~g~C~~~~~~~y~C~C~~G~~G~   31 (32)
T PF00008_consen    5 PCQNGGTCIDLPGGGYTCECPPGYTGK   31 (32)
T ss_dssp             SSTTTEEEEEESTSEEEEEEBTTEEST
T ss_pred             cCCCCeEEEeCCCCCEEeECCCCCccC
Confidence            599999999987466999999999984

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length.; GO: 0005515 protein binding; PDB: 1WHE_A 1CCF_A 1APO_A 1WHF_A 2VJ3_A 1TOZ_A 4D90_B 3CFW_A 1EDM_B 1IXA_A ....

>PF12662 cEGF: Complement Clr-like EGF-like

Probab=97.74  E-value=2.6e-05  Score=39.44  Aligned_cols=22  Identities=23%  Similarity=0.915  Sum_probs=19.4

Q ss_pred             eeEeecCCCCc--cCCCccccCCC
Q psy5752         148 HFHCECNEGFT--GNGITCKPVRK  169 (222)
Q Consensus       148 ~~~C~C~~G~~--gd~~~C~~~~~  169 (222)
                      +|+|+|++||.  .|+.+|.+|++
T Consensus         1 sy~C~C~~Gy~l~~d~~~C~DIdE   24 (24)
T PF12662_consen    1 SYTCSCPPGYQLSPDGRSCEDIDE   24 (24)
T ss_pred             CEEeeCCCCCcCCCCCCccccCCC
Confidence            49999999999  57889999975

>PF12662 cEGF: Complement Clr-like EGF-like

Probab=97.63  E-value=4.5e-05  Score=38.59  Aligned_cols=22  Identities=32%  Similarity=0.973  Sum_probs=16.8

Q ss_pred             CeEEecCCCCc--cCCCeeecCCC
Q psy5752          79 GYRCQCAQGYV--GNGVECHPLKS  100 (222)
Q Consensus        79 ~~~C~C~~G~~--~~~~~C~~~~~  100 (222)
                      ||+|+|++||.  .++..|+||||
T Consensus         1 sy~C~C~~Gy~l~~d~~~C~DIdE   24 (24)
T PF12662_consen    1 SYTCSCPPGYQLSPDGRSCEDIDE   24 (24)
T ss_pred             CEEeeCCCCCcCCCCCCccccCCC
Confidence            68999999998  45666666654

>PF14670 FXa_inhibition: Coagulation Factor Xa inhibitory site; PDB: 3Q3K_B 1NFY_B 1LQD_A 1G2L_B 1IQF_L 2UWP_B 2VH6_B 3KQC_L 2P93_L 2BQW_A

Probab=97.53  E-value=6.5e-05  Score=42.11  Aligned_cols=32  Identities=28%  Similarity=0.782  Sum_probs=23.1

Q ss_pred             CCCCCCCCCCeeeeCCCCeeEeecCCCCcc--CCCcc
Q psy5752         130 EDRSLCGKDASCVVASQGHFHCECNEGFTG--NGITC  164 (222)
Q Consensus       130 ~~~~~C~~~~~C~n~~~g~~~C~C~~G~~g--d~~~C  164 (222)
                      ...+.|.+  .|+++++ +|+|.|++||..  |+++|
T Consensus         3 ~~NGgC~h--~C~~~~g-~~~C~C~~Gy~L~~D~~tC   36 (36)
T PF14670_consen    3 VNNGGCSH--ICVNTPG-SYRCSCPPGYKLAEDGRTC   36 (36)
T ss_dssp             TGGGGSSS--EEEEETT-SEEEE-STTEEE-TTSSSE
T ss_pred             CCCCCcCC--CCccCCC-ceEeECCCCCEECcCCCCC
Confidence            34566865  8999975 599999999994  55554

...

>PF06247 Plasmod_Pvs28: Plasmodium ookinete surface protein Pvs28; InterPro: IPR010423 This family consists of several ookinete surface protein (Pvs28) from several species of Plasmodium

Probab=97.48  E-value=5.4e-05  Score=57.81  Aligned_cols=130  Identities=26%  Similarity=0.674  Sum_probs=72.1

Q ss_pred             CCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCcccCCCCCCC----CCCCCCCCEeeec---CCCCCeEEecCCCC
Q psy5752          16 PCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPESLGCNV----VKNCHANAECVYN---ATSAGYRCQCAQGY   88 (222)
Q Consensus        16 ~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~~~~~C~~----~~~C~~~~~C~~~---n~~g~~~C~C~~G~   88 (222)
                      .|.| |.-+.      +...|.|.|.+||.-...++|+...+ |..    ..+|+..+.|+..   .....|.|.|.+||
T Consensus         7 ~CKN-G~LiQ------MSNHfEC~Cnegfvl~~EntCE~kv~-C~~~e~~~K~Cgdya~C~~~~~~~~~~~~~C~C~~gY   78 (197)
T PF06247_consen    7 ICKN-GYLIQ------MSNHFECKCNEGFVLKNENTCEEKVE-CDKLENVNKPCGDYAKCINQANKGEERAYKCDCINGY   78 (197)
T ss_dssp             --BT-EEEEE------ESSEEEEEESTTEEEEETTEEEE-----SG-GGTTSEEETTEEEEE-SSTTSSTSEEEEE-TTE
T ss_pred             cccC-CEEEE------ccCceEEEcCCCcEEcccccccccee-cCcccccCccccchhhhhcCCCcccceeEEEecccCc
Confidence            4553 45554      45556999999998544458988774 764    4789999999731   12367999999999


Q ss_pred             ccCCCeeecCCCcCCCCCCCCC----------------CCCCcc-cCCCcccc--CCCCCCCCCCCCCCCeeeeCCCCee
Q psy5752          89 VGNGVECHPLKSCLEDRSLCGK----------------DSQGYV-GNGVECHP--LKSCLEDRSLCGKDASCVVASQGHF  149 (222)
Q Consensus        89 ~~~~~~C~~~~~C~~~~~~C~~----------------c~~g~~-~~g~~C~~--id~C~~~~~~C~~~~~C~n~~~g~~  149 (222)
                      +.....|.+. .|..  -.|..                |.-|+. .+...|..  ..+|++   .|..+..|.... +.|
T Consensus        79 ~~~~~vCvp~-~C~~--~~Cg~GKCI~d~~~~~~~~CSC~IGkV~~dn~kCtk~G~T~C~L---KCk~nE~CK~~~-~~Y  151 (197)
T PF06247_consen   79 ILKQGVCVPN-KCNN--KDCGSGKCILDPDNPNNPTCSCNIGKVPDDNKKCTKTGETKCSL---KCKENEECKLVD-GYY  151 (197)
T ss_dssp             EESSSSEEEG-GGSS-----TTEEEEEEEGGGSEEEEEE-TEEETTTTTESEEEE-----------TTTEEEEEET-TEE
T ss_pred             eeeCCeEchh-hcCc--eecCCCeEEecCCCCCCceeEeeeceEeccCCcccCCCccceee---ecCCCcceeeeC-cEE
Confidence            9665555431 1111  11111                333444 34445542  355654   277778899884 779


Q ss_pred             EeecCCCCccC
Q psy5752         150 HCECNEGFTGN  160 (222)
Q Consensus       150 ~C~C~~G~~gd  160 (222)
                      +|.|.+||.++
T Consensus       152 ~C~~~~~~~~~  162 (197)
T PF06247_consen  152 KCVCKEGFPGD  162 (197)
T ss_dssp             EEEE-TT-EEE
T ss_pred             EeecCCCCCCC
Confidence            99999999864

Pvs25 and Pvs28 are expressed on the surface of ookinetes. These proteins are potential candidates for vaccine and induce antibodies that block the infectivity of Plasmodium vivax in immunised animals [].; GO: 0009986 cell surface, 0016020 membrane; PDB: 1Z3G_B 1Z1Y_B 1Z27_A.

>cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

Probab=97.44  E-value=0.00021  Score=39.98  Aligned_cols=33  Identities=33%  Similarity=0.925  Sum_probs=27.4

Q ss_pred             CCCCC-C-CCCCCCCeecCCCCCCCCCCceeeecCCCCccC
Q psy5752           9 SLSEC-D-TPCHPNAQCTSPDEFNESREQAKCICNFGYTGD   47 (222)
Q Consensus         9 ~~~~C-~-~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~   47 (222)
                      ++++| . .+|.+++.|++.     .+.| .|.|++||.|.
T Consensus         1 ~~~~C~~~~~C~~~~~C~~~-----~~~~-~C~C~~g~~g~   35 (38)
T cd00054           1 DIDECASGNPCQNGGTCVNT-----VGSY-RCSCPPGYTGR   35 (38)
T ss_pred             CcccCCCCCCcCCCCEeECC-----CCCe-EeECCCCCcCC
Confidence            46888 5 789999999984     5565 99999999986

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.

>KOG1225|consensus

Probab=97.41  E-value=0.00047  Score=61.41  Aligned_cols=58  Identities=33%  Similarity=0.995  Sum_probs=45.0

Q ss_pred             CCCCCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCcccCCCCCCCCCCCCCCCEeeecCCCCCeEEecCCCCccCC
Q psy5752          13 CDTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPESLGCNVVKNCHANAECVYNATSAGYRCQCAQGYVGNG   92 (222)
Q Consensus        13 C~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~~~~~C~~~~~C~~~~~C~~~n~~g~~~C~C~~G~~~~~   92 (222)
                      |+..|..++.+++  .        .|.|++||.|.   .|+...  |.  ..|..++.|+    .  -+|.|.+||+|..
T Consensus       283 Cp~~cs~~g~~~~--g--------~CiC~~g~~G~---dCs~~~--cp--adC~g~G~Ci----~--G~C~C~~Gy~G~~  339 (525)
T KOG1225|consen  283 CPVDCSGGGVCVD--G--------ECICNPGYSGK---DCSIRR--CP--ADCSGHGKCI----D--GECLCDEGYTGEL  339 (525)
T ss_pred             CCcccCCCceecC--C--------EeecCCCcccc---cccccc--CC--ccCCCCCccc----C--CceEeCCCCcCCc
Confidence            5455877788876  2        79999999999   887654  43  6898899995    2  2799999999874


Q ss_pred             C
Q psy5752          93 V   93 (222)
Q Consensus        93 ~   93 (222)
                      +
T Consensus       340 C  340 (525)
T KOG1225|consen  340 C  340 (525)
T ss_pred             c
Confidence            3

>cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

Probab=97.28  E-value=0.00049  Score=38.43  Aligned_cols=33  Identities=27%  Similarity=0.869  Sum_probs=26.2

Q ss_pred             CCCCCCCCCCCCCCCeeeeCCCCeeEeecCCCCcc
Q psy5752         125 LKSCLEDRSLCGKDASCVVASQGHFHCECNEGFTG  159 (222)
Q Consensus       125 id~C~~~~~~C~~~~~C~n~~~g~~~C~C~~G~~g  159 (222)
                      +++|... ..|.+++.|++..++ |+|.|++||.|
T Consensus         2 ~~~C~~~-~~C~~~~~C~~~~~~-~~C~C~~g~~g   34 (38)
T cd00054           2 IDECASG-NPCQNGGTCVNTVGS-YRCSCPPGYTG   34 (38)
T ss_pred             cccCCCC-CCcCCCCEeECCCCC-eEeECCCCCcC
Confidence            5677652 358878899999755 99999999988

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.

>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium

Probab=97.06  E-value=0.0013  Score=36.10  Aligned_cols=27  Identities=30%  Similarity=0.924  Sum_probs=22.8

Q ss_pred             CCCCCCCeeeeCCCCeeEeecCCCCccC
Q psy5752         133 SLCGKDASCVVASQGHFHCECNEGFTGN  160 (222)
Q Consensus       133 ~~C~~~~~C~n~~~g~~~C~C~~G~~gd  160 (222)
                      ..|.+++.|++..++ |+|.|++||.++
T Consensus         6 ~~C~~~~~C~~~~~~-~~C~C~~g~~g~   32 (36)
T cd00053           6 NPCSNGGTCVNTPGS-YRCVCPPGYTGD   32 (36)
T ss_pred             CCCCCCCEEecCCCC-eEeECCCCCccc
Confidence            458878899999755 999999999985

>smart00181 EGF Epidermal growth factor-like domain

Probab=96.95  E-value=0.0018  Score=35.73  Aligned_cols=26  Identities=31%  Similarity=1.048  Sum_probs=21.6

Q ss_pred             CCCCCCCeeeeCCCCeeEeecCCCCccC
Q psy5752         133 SLCGKDASCVVASQGHFHCECNEGFTGN  160 (222)
Q Consensus       133 ~~C~~~~~C~n~~~g~~~C~C~~G~~gd  160 (222)
                      +.|.++ .|+++. ++|.|.|++||.++
T Consensus         6 ~~C~~~-~C~~~~-~~~~C~C~~g~~g~   31 (35)
T smart00181        6 GPCSNG-TCINTP-GSYTCSCPPGYTGD   31 (35)
T ss_pred             CCCCCC-EEECCC-CCeEeECCCCCccC
Confidence            458877 899996 55999999999984

>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium

Probab=96.65  E-value=0.0039  Score=34.04  Aligned_cols=27  Identities=41%  Similarity=1.078  Sum_probs=23.9

Q ss_pred             CCCCCCCEeeecCCCCCeEEecCCCCccC
Q psy5752          63 KNCHANAECVYNATSAGYRCQCAQGYVGN   91 (222)
Q Consensus        63 ~~C~~~~~C~~~n~~g~~~C~C~~G~~~~   91 (222)
                      .+|.++++|+  +..++|.|.|+.||.+.
T Consensus         6 ~~C~~~~~C~--~~~~~~~C~C~~g~~g~   32 (36)
T cd00053           6 NPCSNGGTCV--NTPGSYRCVCPPGYTGD   32 (36)
T ss_pred             CCCCCCCEEe--cCCCCeEeECCCCCccc
Confidence            6788889997  88899999999999876

>smart00181 EGF Epidermal growth factor-like domain

Probab=96.62  E-value=0.0031  Score=34.69  Aligned_cols=26  Identities=38%  Similarity=0.921  Sum_probs=21.5

Q ss_pred             CCCCCCCeecCCCCCCCCCCceeeecCCCCccC
Q psy5752          15 TPCHPNAQCTSPDEFNESREQAKCICNFGYTGD   47 (222)
Q Consensus        15 ~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~   47 (222)
                      .+|.++ .|++.     .+.| .|.|++||.|.
T Consensus         6 ~~C~~~-~C~~~-----~~~~-~C~C~~g~~g~   31 (35)
T smart00181        6 GPCSNG-TCINT-----PGSY-TCSCPPGYTGD   31 (35)
T ss_pred             CCCCCC-EEECC-----CCCe-EeECCCCCccC
Confidence            589888 99983     5666 99999999983

>PF12946 EGF_MSP1_1: MSP1 EGF domain 1; InterPro: IPR024730 This EGF-like domain is found at the C terminus of the malaria parasite MSP1 protein

Probab=96.14  E-value=0.0046  Score=34.51  Aligned_cols=31  Identities=29%  Similarity=0.687  Sum_probs=23.3

Q ss_pred             CCCCCCeeeeCCCCeeEeecCCCCccCCCcc
Q psy5752         134 LCGKDASCVVASQGHFHCECNEGFTGNGITC  164 (222)
Q Consensus       134 ~C~~~~~C~n~~~g~~~C~C~~G~~gd~~~C  164 (222)
                      .|..++.|++..+|++.|.|..||..++..|
T Consensus         6 ~cP~NA~C~~~~dG~eecrCllgyk~~~~~C   36 (37)
T PF12946_consen    6 KCPANAGCFRYDDGSEECRCLLGYKKVGGKC   36 (37)
T ss_dssp             ---TTEEEEEETTSEEEEEE-TTEEEETTEE
T ss_pred             cCCCCcccEEcCCCCEEEEeeCCccccCCCc
Confidence            4888899999987889999999999765555

MSP1 is the merozoite surface protein 1. This domain is part of the C-terminal fragment that is proteolytically processed from the the rest of the protein and is left attached to the surface of the invading parasite [].; PDB: 1N1I_C 2FLG_A 1CEJ_A 2NPR_A 1B9W_A 1OB1_F.

>cd01475 vWA_Matrilin VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and matrix-matrix interactions thereby providing tissue integrity

Probab=95.98  E-value=0.008  Score=48.12  Aligned_cols=39  Identities=26%  Similarity=0.722  Sum_probs=32.9

Q ss_pred             CCCccccCCCCCCCCCCCCCCCeeeeCCCCeeEeecCCCCcc
Q psy5752         118 NGVECHPLKSCLEDRSLCGKDASCVVASQGHFHCECNEGFTG  159 (222)
Q Consensus       118 ~g~~C~~id~C~~~~~~C~~~~~C~n~~~g~~~C~C~~G~~g  159 (222)
                      .+..|.++++|...++.|.+  .|.++. |+|.|.|++||+.
T Consensus       180 ~~~~C~~~~~C~~~~~~c~~--~C~~~~-g~~~c~c~~g~~~  218 (224)
T cd01475         180 QGKICVVPDLCATLSHVCQQ--VCISTP-GSYLCACTEGYAL  218 (224)
T ss_pred             ccccCcCchhhcCCCCCccc--eEEcCC-CCEEeECCCCccC
Confidence            45689999999887888975  799997 6699999999984

Some members of the matrilin family are expressed specifically in developing cartilage rudiments. The matrilin family consists of at least four members. All the members of the matrilin family contain VWA domains, EGF-like domains and a heptad repeat coiled-coiled domain at the carboxy terminus which is responsible for the oligomerization of the matrilins. The VWA domains have been shown to be essential for matrilin network formation by interacting with matrix ligands.

>KOG1226|consensus

Probab=95.48  E-value=0.091  Score=48.55  Aligned_cols=69  Identities=23%  Similarity=0.710  Sum_probs=49.1

Q ss_pred             CCCCCCeecCCCCCCCCCCceeeecCCCCc----cCCCCCcccCCCCCCC--CCCCCCCCEeeecCCCCCeEEecCCCCc
Q psy5752          16 PCHPNAQCTSPDEFNESREQAKCICNFGYT----GDGVTECNPESLGCNV--VKNCHANAECVYNATSAGYRCQCAQGYV   89 (222)
Q Consensus        16 ~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~----g~~~~~C~~~~~~C~~--~~~C~~~~~C~~~n~~g~~~C~C~~G~~   89 (222)
                      +|...|.|+=  .        .|.|.+...    |.   .|+-++-.|..  ...|..++.|.    =  -+|.|.+||+
T Consensus       515 vCSgrG~C~C--G--------qC~C~~~~~~~i~G~---fCECDnfsC~r~~g~lC~g~G~C~----C--G~CvC~~Gwt  575 (783)
T KOG1226|consen  515 VCSGRGDCVC--G--------QCVCHKPDNGKIYGK---FCECDNFSCERHKGVLCGGHGRCE----C--GRCVCNPGWT  575 (783)
T ss_pred             CcCCCCcEeC--C--------ceEecCCCCCceeee---eeeccCcccccccCcccCCCCeEe----C--CcEEcCCCCc
Confidence            7888888876  2        799987776    55   88866545665  34688888884    1  2799999999


Q ss_pred             cCCCeee-cCCCcCC
Q psy5752          90 GNGVECH-PLKSCLE  103 (222)
Q Consensus        90 ~~~~~C~-~~~~C~~  103 (222)
                      |..+.|. +.+.|..
T Consensus       576 G~~C~C~~std~C~~  590 (783)
T KOG1226|consen  576 GSACNCPLSTDTCES  590 (783)
T ss_pred             cCCCCCCCCCccccC
Confidence            9988775 3344543

>PF07974 EGF_2: EGF-like domain; InterPro: IPR013111 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=95.47  E-value=0.023  Score=30.89  Aligned_cols=25  Identities=40%  Similarity=1.034  Sum_probs=20.5

Q ss_pred             CCCCCCCeecCCCCCCCCCCceeeecCCCCccC
Q psy5752          15 TPCHPNAQCTSPDEFNESREQAKCICNFGYTGD   47 (222)
Q Consensus        15 ~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~   47 (222)
                      ..|.++|+|+..       .. .|.|.+||+|+
T Consensus         6 ~~C~~~G~C~~~-------~g-~C~C~~g~~G~   30 (32)
T PF07974_consen    6 NICSGHGTCVSP-------CG-RCVCDSGYTGP   30 (32)
T ss_pred             CccCCCCEEeCC-------CC-EEECCCCCcCC
Confidence            369999999972       12 89999999998

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length. This entry contains EGF domains found in a variety of extracellular and membrane proteins

>PF12661 hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E26_A 3A7Q_A 2YGP_A 2YGO_A 1HRE_A 1HAE_A 1HAF_A 1HRF_A

Probab=95.44  E-value=0.0062  Score=26.06  Aligned_cols=11  Identities=45%  Similarity=1.078  Sum_probs=9.0

Q ss_pred             eeecCCCCccC
Q psy5752          37 KCICNFGYTGD   47 (222)
Q Consensus        37 ~C~C~~G~~g~   47 (222)
                      .|+|++||+|.
T Consensus         1 ~C~C~~G~~G~   11 (13)
T PF12661_consen    1 TCQCPPGWTGP   11 (13)
T ss_dssp             EEEE-TTEETT
T ss_pred             CccCcCCCcCC
Confidence            49999999998

>PF14670 FXa_inhibition: Coagulation Factor Xa inhibitory site; PDB: 3Q3K_B 1NFY_B 1LQD_A 1G2L_B 1IQF_L 2UWP_B 2VH6_B 3KQC_L 2P93_L 2BQW_A

Probab=95.40  E-value=0.011  Score=33.03  Aligned_cols=21  Identities=43%  Similarity=0.931  Sum_probs=16.5

Q ss_pred             CEeeecCCCCCeEEecCCCCccC
Q psy5752          69 AECVYNATSAGYRCQCAQGYVGN   91 (222)
Q Consensus        69 ~~C~~~n~~g~~~C~C~~G~~~~   91 (222)
                      .+|+  +++++|+|.|++||...
T Consensus        10 h~C~--~~~g~~~C~C~~Gy~L~   30 (36)
T PF14670_consen   10 HICV--NTPGSYRCSCPPGYKLA   30 (36)
T ss_dssp             SEEE--EETTSEEEE-STTEEE-
T ss_pred             CCCc--cCCCceEeECCCCCEEC
Confidence            4897  88999999999999843

...

>PF12946 EGF_MSP1_1: MSP1 EGF domain 1; InterPro: IPR024730 This EGF-like domain is found at the C terminus of the malaria parasite MSP1 protein

Probab=95.21  E-value=0.015  Score=32.53  Aligned_cols=35  Identities=34%  Similarity=0.769  Sum_probs=23.3

Q ss_pred             CCCCCCCCCCCEeeecCCCCCeEEecCCCCccCCCee
Q psy5752          59 CNVVKNCHANAECVYNATSAGYRCQCAQGYVGNGVEC   95 (222)
Q Consensus        59 C~~~~~C~~~~~C~~~n~~g~~~C~C~~G~~~~~~~C   95 (222)
                      |.. ..|..++.|+ +...|++.|+|..||..++..|
T Consensus         2 C~~-~~cP~NA~C~-~~~dG~eecrCllgyk~~~~~C   36 (37)
T PF12946_consen    2 CID-TKCPANAGCF-RYDDGSEECRCLLGYKKVGGKC   36 (37)
T ss_dssp             -SS-S---TTEEEE-EETTSEEEEEE-TTEEEETTEE
T ss_pred             ccC-ccCCCCcccE-EcCCCCEEEEeeCCccccCCCc
Confidence            444 6777899998 4666999999999998665544

MSP1 is the merozoite surface protein 1. This domain is part of the C-terminal fragment that is proteolytically processed from the the rest of the protein and is left attached to the surface of the invading parasite [].; PDB: 1N1I_C 2FLG_A 1CEJ_A 2NPR_A 1B9W_A 1OB1_F.

>KOG1226|consensus

Probab=95.20  E-value=0.21  Score=46.26  Aligned_cols=120  Identities=24%  Similarity=0.710  Sum_probs=63.0

Q ss_pred             eeecCCCCccCCCCCcccCC---------CCCCC--C-CCCCCCCEeeecCCCCCeEEecCCCCc----cCCCeeecCCC
Q psy5752          37 KCICNFGYTGDGVTECNPES---------LGCNV--V-KNCHANAECVYNATSAGYRCQCAQGYV----GNGVECHPLKS  100 (222)
Q Consensus        37 ~C~C~~G~~g~~~~~C~~~~---------~~C~~--~-~~C~~~~~C~~~n~~g~~~C~C~~G~~----~~~~~C~~~~~  100 (222)
                      .|.|.+||.|+   .|+=..         +.|..  . ..|...+.|+    =|  +|.|.+...    |..++|.+. .
T Consensus       479 ~C~C~~G~~G~---~CEC~~~~~ss~~~~~~Cr~~~~~~vCSgrG~C~----CG--qC~C~~~~~~~i~G~fCECDnf-s  548 (783)
T KOG1226|consen  479 QCRCDEGWLGK---KCECSTDELSSSEEEDKCRENSDSPVCSGRGDCV----CG--QCVCHKPDNGKIYGKFCECDNF-S  548 (783)
T ss_pred             ceecCCCCCCC---cccCCccccCcHhHHhhccCCCCCCCcCCCCcEe----CC--ceEecCCCCCceeeeeeeccCc-c
Confidence            57999999998   665211         12432  1 2566666664    11  577766554    333333222 1


Q ss_pred             cCCC-------CCC--CCC--CCCCcccCCCccc-cCCCCCCCC-CCCCCCCeeeeCCCCeeEeecCCC-CccCCCcccc
Q psy5752         101 CLED-------RSL--CGK--DSQGYVGNGVECH-PLKSCLEDR-SLCGKDASCVVASQGHFHCECNEG-FTGNGITCKP  166 (222)
Q Consensus       101 C~~~-------~~~--C~~--c~~g~~~~g~~C~-~id~C~~~~-~~C~~~~~C~n~~~g~~~C~C~~G-~~gd~~~C~~  166 (222)
                      |...       ++.  |+.  |..||+|..-.|. +.+.|.... ..|...++|.   =|  +|.|... |.|  .+|+.
T Consensus       549 C~r~~g~lC~g~G~C~CG~CvC~~GwtG~~C~C~~std~C~~~~G~iCSGrG~C~---Cg--~C~C~~~~~sG--~~CE~  621 (783)
T KOG1226|consen  549 CERHKGVLCGGHGRCECGRCVCNPGWTGSACNCPLSTDTCESSDGQICSGRGTCE---CG--RCKCTDPPYSG--EFCEK  621 (783)
T ss_pred             cccccCcccCCCCeEeCCcEEcCCCCccCCCCCCCCCccccCCCCceeCCCceee---CC--ceEcCCCCcCc--chhhc
Confidence            2211       111  222  5778877633332 346664422 2355555554   13  4777665 777  77877


Q ss_pred             CCCCCCC
Q psy5752         167 VRKKESD  173 (222)
Q Consensus       167 ~~~~~~~  173 (222)
                      -+.+...
T Consensus       622 cptc~~~  628 (783)
T KOG1226|consen  622 CPTCPDP  628 (783)
T ss_pred             CCCCCCc
Confidence            6666554

>KOG0994|consensus

Probab=94.51  E-value=0.1  Score=50.31  Aligned_cols=53  Identities=28%  Similarity=0.651  Sum_probs=29.8

Q ss_pred             ee-ecCCCCccCCCCCcccCCCCCCCCCCCC--------CCCEeeecCCCCCeEEecCCCCccCCC
Q psy5752          37 KC-ICNFGYTGDGVTECNPESLGCNVVKNCH--------ANAECVYNATSAGYRCQCAQGYVGNGV   93 (222)
Q Consensus        37 ~C-~C~~G~~g~~~~~C~~~~~~C~~~~~C~--------~~~~C~~~n~~g~~~C~C~~G~~~~~~   93 (222)
                      +| +|..||.|+++ .=..+  .|.+ -+|.        ....|.-.+......|.|.+||+|..+
T Consensus       886 ~CdrCl~GyyGdP~-lg~g~--~CrP-CpCP~gp~Sg~~~A~sC~~d~~t~~ivC~C~~GY~G~RC  947 (1758)
T KOG0994|consen  886 SCDRCLDGYYGDPR-LGSGI--GCRP-CPCPDGPASGRQHADSCYLDTRTQQIVCHCQEGYSGSRC  947 (1758)
T ss_pred             chhhhhccccCCcc-cCCCC--CCCC-CCCCCCCccchhccccccccccccceeeecccCccccch
Confidence            67 89999998754 11111  1333 2332        122453112334567999999998754

>PF07974 EGF_2: EGF-like domain; InterPro: IPR013111 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=94.04  E-value=0.1  Score=28.33  Aligned_cols=23  Identities=35%  Similarity=1.014  Sum_probs=19.5

Q ss_pred             CCCCCCeeeeCCCCeeEeecCCCCcc
Q psy5752         134 LCGKDASCVVASQGHFHCECNEGFTG  159 (222)
Q Consensus       134 ~C~~~~~C~n~~~g~~~C~C~~G~~g  159 (222)
                      .|..+++|++..   .+|.|.+||+|
T Consensus         7 ~C~~~G~C~~~~---g~C~C~~g~~G   29 (32)
T PF07974_consen    7 ICSGHGTCVSPC---GRCVCDSGYTG   29 (32)
T ss_pred             ccCCCCEEeCCC---CEEECCCCCcC
Confidence            488899999762   57999999998

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length. This entry contains EGF domains found in a variety of extracellular and membrane proteins

>KOG0994|consensus

Probab=93.02  E-value=0.42  Score=46.36  Aligned_cols=64  Identities=28%  Similarity=0.687  Sum_probs=37.7

Q ss_pred             EEecCCCCccCCCeeecCCCcCCCCCCCCCCCCCcccCC--Cccc---cCCCCCCCCCCCCCCCeeeeCCCCeeEe-ecC
Q psy5752          81 RCQCAQGYVGNGVECHPLKSCLEDRSLCGKDSQGYVGNG--VECH---PLKSCLEDRSLCGKDASCVVASQGHFHC-ECN  154 (222)
Q Consensus        81 ~C~C~~G~~~~~~~C~~~~~C~~~~~~C~~c~~g~~~~g--~~C~---~id~C~~~~~~C~~~~~C~n~~~g~~~C-~C~  154 (222)
                      +|.|.+|.-|..               |..|.+||++-.  +.|.   ..+.|....+.|..   |.+...| +.| .|.
T Consensus       831 QC~C~~g~ygrq---------------CnqCqpG~WgFPeCr~CqCNgHA~~Cd~~tGaCi~---CqD~T~G-~~CdrCl  891 (1758)
T KOG0994|consen  831 QCQCRPGTYGRQ---------------CNQCQPGYWGFPECRPCQCNGHADTCDPITGACID---CQDSTTG-HSCDRCL  891 (1758)
T ss_pred             ceeeccccchhh---------------ccccCCCccCCCcCccccccCcccccCcccccccc---ccccccc-cchhhhh
Confidence            677776654442               344566665321  2222   13556555555643   7777667 888 799


Q ss_pred             CCCccCCCc
Q psy5752         155 EGFTGNGIT  163 (222)
Q Consensus       155 ~G~~gd~~~  163 (222)
                      .||+||...
T Consensus       892 ~GyyGdP~l  900 (1758)
T KOG0994|consen  892 DGYYGDPRL  900 (1758)
T ss_pred             ccccCCccc
Confidence            999987643

>PHA02887 EGF-like protein; Provisional

Probab=92.64  E-value=0.13  Score=36.35  Aligned_cols=40  Identities=38%  Similarity=0.787  Sum_probs=30.3

Q ss_pred             CCCCC----CCCCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCcccCC
Q psy5752           9 SLSEC----DTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPES   56 (222)
Q Consensus         9 ~~~~C----~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~~~   56 (222)
                      -+.+|    .+-|- ||.|.....   .... .|.|+.||+|.   .|+.++
T Consensus        82 hf~pC~~eyk~YCi-HG~C~yI~d---L~ep-sCrC~~GYtG~---RCE~vs  125 (126)
T PHA02887         82 FFEKCKNDFNDFCI-NGECMNIID---LDEK-FCICNKGYTGI---RCDEVS  125 (126)
T ss_pred             CccccChHhhCEee-CCEEEcccc---CCCc-eeECCCCcccC---CCCccc
Confidence            46778    36787 579998644   5555 89999999999   887653

>PHA03099 epidermal growth factor-like protein (EGF-like protein); Provisional

Probab=90.09  E-value=0.24  Score=35.69  Aligned_cols=40  Identities=28%  Similarity=0.665  Sum_probs=29.9

Q ss_pred             CCCCC----CCCCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCcccCC
Q psy5752           9 SLSEC----DTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPES   56 (222)
Q Consensus         9 ~~~~C----~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~~~   56 (222)
                      ++.+|    .+-|-|+ .|.....   ...+ .|.|..||+|.   .|+..+
T Consensus        41 ~i~~Cp~ey~~YClHG-~C~yI~d---l~~~-~CrC~~GYtGe---RCEh~d   84 (139)
T PHA03099         41 AIRLCGPEGDGYCLHG-DCIHARD---IDGM-YCRCSHGYTGI---RCQHVV   84 (139)
T ss_pred             ccccCChhhCCEeECC-EEEeecc---CCCc-eeECCCCcccc---ccccee
Confidence            35667    3668764 8987654   5666 89999999999   888654

>PF06247 Plasmod_Pvs28: Plasmodium ookinete surface protein Pvs28; InterPro: IPR010423 This family consists of several ookinete surface protein (Pvs28) from several species of Plasmodium

Probab=90.04  E-value=0.15  Score=39.27  Aligned_cols=75  Identities=23%  Similarity=0.594  Sum_probs=42.6

Q ss_pred             CCCCCCCEeeecCCCCCeEEecCCCCc-cCCCeeecCCCcCCCCCCCCCCCCCcccCCCccccCCCCCCCCCCCCCCCee
Q psy5752          63 KNCHANAECVYNATSAGYRCQCAQGYV-GNGVECHPLKSCLEDRSLCGKDSQGYVGNGVECHPLKSCLEDRSLCGKDASC  141 (222)
Q Consensus        63 ~~C~~~~~C~~~n~~g~~~C~C~~G~~-~~~~~C~~~~~C~~~~~~C~~c~~g~~~~g~~C~~id~C~~~~~~C~~~~~C  141 (222)
                      ..|.+ +..+  ...+.|.|.|.+||. -+..+|+...+|...                        ......|...++|
T Consensus         6 T~CKN-G~Li--QMSNHfEC~Cnegfvl~~EntCE~kv~C~~~------------------------e~~~K~Cgdya~C   58 (197)
T PF06247_consen    6 TICKN-GYLI--QMSNHFECKCNEGFVLKNENTCEEKVECDKL------------------------ENVNKPCGDYAKC   58 (197)
T ss_dssp             ---BT-EEEE--EESSEEEEEESTTEEEEETTEEEE----SG-------------------------GGTTSEEETTEEE
T ss_pred             ccccC-CEEE--EccCceEEEcCCCcEEccccccccceecCcc------------------------cccCccccchhhh
Confidence            45543 4454  456789999999997 344555555444321                        0112348778899


Q ss_pred             eeCCC----CeeEeecCCCCccCCCcc
Q psy5752         142 VVASQ----GHFHCECNEGFTGNGITC  164 (222)
Q Consensus       142 ~n~~~----g~~~C~C~~G~~gd~~~C  164 (222)
                      ++.+.    ..|.|.|.+||......|
T Consensus        59 ~~~~~~~~~~~~~C~C~~gY~~~~~vC   85 (197)
T PF06247_consen   59 INQANKGEERAYKCDCINGYILKQGVC   85 (197)
T ss_dssp             EE-SSTTSSTSEEEEE-TTEEESSSSE
T ss_pred             hcCCCcccceeEEEecccCceeeCCeE
Confidence            97763    459999999999543343

Pvs25 and Pvs28 are expressed on the surface of ookinetes. These proteins are potential candidates for vaccine and induce antibodies that block the infectivity of Plasmodium vivax in immunised animals [].; GO: 0009986 cell surface, 0016020 membrane; PDB: 1Z3G_B 1Z1Y_B 1Z27_A.

>smart00051 DSL delta serrate ligand

Probab=89.17  E-value=0.82  Score=28.93  Aligned_cols=44  Identities=23%  Similarity=0.650  Sum_probs=30.2

Q ss_pred             eeecCCCCccCCCCCcccCCCCCCCCCCCCCCCEeeecCCCCCeEEecCCCCccC
Q psy5752          37 KCICNFGYTGDGVTECNPESLGCNVVKNCHANAECVYNATSAGYRCQCAQGYVGN   91 (222)
Q Consensus        37 ~C~C~~G~~g~~~~~C~~~~~~C~~~~~C~~~~~C~~~n~~g~~~C~C~~G~~~~   91 (222)
                      .-.|+++|.|.   .|...   |.+.+.+..+..|   +..|  .+.|.+||.|.
T Consensus        18 rv~C~~~~yG~---~C~~~---C~~~~d~~~~~~C---d~~G--~~~C~~Gw~G~   61 (63)
T smart00051       18 RVTCDENYYGE---GCNKF---CRPRDDFFGHYTC---DENG--NKGCLEGWMGP   61 (63)
T ss_pred             EeeCCCCCcCC---ccCCE---eCcCccccCCccC---CcCC--CEecCCCCcCC
Confidence            56899999998   77532   5543445556678   4334  57899999876

>cd01475 vWA_Matrilin VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and matrix-matrix interactions thereby providing tissue integrity

Probab=87.79  E-value=0.63  Score=37.11  Aligned_cols=36  Identities=28%  Similarity=0.712  Sum_probs=28.0

Q ss_pred             CcccCCCCCCC-CCCCCCCCEeeecCCCCCeEEecCCCCccC
Q psy5752          51 ECNPESLGCNV-VKNCHANAECVYNATSAGYRCQCAQGYVGN   91 (222)
Q Consensus        51 ~C~~~~~~C~~-~~~C~~~~~C~~~n~~g~~~C~C~~G~~~~   91 (222)
                      .|++.+ +|.. .+.|.  ..|.  ++.|+|.|.|.+||+..
T Consensus       183 ~C~~~~-~C~~~~~~c~--~~C~--~~~g~~~c~c~~g~~~~  219 (224)
T cd01475         183 ICVVPD-LCATLSHVCQ--QVCI--STPGSYLCACTEGYALL  219 (224)
T ss_pred             cCcCch-hhcCCCCCcc--ceEE--cCCCCEEeECCCCccCC
Confidence            787666 4875 45674  4796  99999999999999843

Some members of the matrilin family are expressed specifically in developing cartilage rudiments. The matrilin family consists of at least four members. All the members of the matrilin family contain VWA domains, EGF-like domains and a heptad repeat coiled-coiled domain at the carboxy terminus which is responsible for the oligomerization of the matrilins. The VWA domains have been shown to be essential for matrilin network formation by interacting with matrix ligands.

>PF00954 S_locus_glycop: S-locus glycoprotein family; InterPro: IPR000858 In Brassicaceae, self-incompatible plants have a self/non-self recognition system, which involves the inability of flowering plants to achieve self-fertilisation

Probab=85.91  E-value=0.88  Score=32.03  Aligned_cols=32  Identities=31%  Similarity=0.707  Sum_probs=24.9

Q ss_pred             CCCCC--CCCCCCCCeecCCCCCCCCCCceeeecCCCCccC
Q psy5752           9 SLSEC--DTPCHPNAQCTSPDEFNESREQAKCICNFGYTGD   47 (222)
Q Consensus         9 ~~~~C--~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~   47 (222)
                      ..|+|  ...|+.++.|..      .... .|.|.+||+-+
T Consensus        76 p~d~Cd~y~~CG~~g~C~~------~~~~-~C~Cl~GF~P~  109 (110)
T PF00954_consen   76 PKDQCDVYGFCGPNGICNS------NNSP-KCSCLPGFEPK  109 (110)
T ss_pred             cccCCCCccccCCccEeCC------CCCC-ceECCCCcCCC
Confidence            46789  689999999965      3344 79999999753

This is sporophytically controlled by multiple alleles at a single locus (S). There are a total of 50 different S alleles in Brassica oleracea. S-locus glycoproteins, as well as S-receptor kinases, are in linkage with the S-alleles []. Most of the proteins within this family contain apple-like domain (IPR003609 from INTERPRO), which is predicted to possess protein- and/or carbohydrate-binding functions.; GO: 0048544 recognition of pollen

>PF00954 S_locus_glycop: S-locus glycoprotein family; InterPro: IPR000858 In Brassicaceae, self-incompatible plants have a self/non-self recognition system, which involves the inability of flowering plants to achieve self-fertilisation

Probab=82.14  E-value=1.8  Score=30.41  Aligned_cols=30  Identities=27%  Similarity=0.734  Sum_probs=23.9

Q ss_pred             CCCCCCCCCCCCEeeecCCCCCeEEecCCCCcc
Q psy5752          58 GCNVVKNCHANAECVYNATSAGYRCQCAQGYVG   90 (222)
Q Consensus        58 ~C~~~~~C~~~~~C~~~n~~g~~~C~C~~G~~~   90 (222)
                      .|.....|+..+.|   +...+..|.|.+||.-
T Consensus        79 ~Cd~y~~CG~~g~C---~~~~~~~C~Cl~GF~P  108 (110)
T PF00954_consen   79 QCDVYGFCGPNGIC---NSNNSPKCSCLPGFEP  108 (110)
T ss_pred             CCCCccccCCccEe---CCCCCCceECCCCcCC
Confidence            47766899999999   4555668999999963

This is sporophytically controlled by multiple alleles at a single locus (S). There are a total of 50 different S alleles in Brassica oleracea. S-locus glycoproteins, as well as S-receptor kinases, are in linkage with the S-alleles []. Most of the proteins within this family contain apple-like domain (IPR003609 from INTERPRO), which is predicted to possess protein- and/or carbohydrate-binding functions.; GO: 0048544 recognition of pollen

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	222
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	3e-11
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	4e-04
2bou_A	143	EGF-like module containing mucin-like hormone rece	2e-09
1gl4_A	285	Nidogen-1, entactin; immunoglobulin-like domain, e	2e-05
3fby_A	551	COMP, cartilage oligomeric matrix protein; signatu	4e-05
3fby_A	551	COMP, cartilage oligomeric matrix protein; signatu	4e-05
1n1i_A	105	Merozoite surface protein-1; MSP1, malaria, surfac	5e-05
1b9w_A	95	Protein (merozoite surface protein 1); MSP-1, cand	4e-04

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A* Length = 634

 Score = 61.6 bits (149), Expect = 3e-11
 Identities = 39/164 (23%), Positives = 52/164 (31%), Gaps = 35/164 (21%)

Query: 12  ECDT-PCHPNAQCTSPDEFNESREQAKCI-CNFGYTGDGVT-----ECNPESLGCNVVKN 64
            C + PC P AQC+     +       C  C  G+ G+G       EC      C     
Sbjct: 5   GCLSNPCFPGAQCS-----SFPDGSWSCGFCPVGFLGNGTHCEDLDECALVPDICFS--- 56

Query: 65  CHANAECVYNATSAGYRC-QCAQGYVGNGVECHPLKSCLEDRSLCGKDSQGYVGNGVECH 123
                 CV   T  G+ C  C   Y GN                     +        C 
Sbjct: 57  TSKVPRCV--NTQPGFHCLPCPPRYRGNQPVG--------------VGLEAAKTEKQVCE 100

Query: 124 PLKSCLEDRSLCGKDASCV---VASQGHFHCECNEGFTGNGITC 164
           P   C +    C K A C+     S   + CEC  G+ G+G+ C
Sbjct: 101 PENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGYAGDGLIC 144

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A* Length = 634

 Score = 40.0 bits (93), Expect = 4e-04
 Identities = 21/85 (24%), Positives = 31/85 (36%), Gaps = 6/85 (7%)

Query: 95  CHPLKSCLEDRS---LCGKDSQGYVGNGVECHPLKSCLEDRSLCGKDASCV--VASQGHF 149
           C P   C         CG    G++GNG  C  L  C     +C   +     V +Q  F
Sbjct: 11  CFPGAQCSSFPDGSWSCGFCPVGFLGNGTHCEDLDECALVPDICFSTSKVPRCVNTQPGF 70

Query: 150 HCE-CNEGFTGNGITCKPVRKKESD 173
           HC  C   + GN      +   +++
Sbjct: 71  HCLPCPPRYRGNQPVGVGLEAAKTE 95

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A Length = 143

 Score = 53.3 bits (128), Expect = 2e-09
 Identities = 27/165 (16%), Positives = 41/165 (24%), Gaps = 46/165 (27%)

Query: 12  ECDTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVT------------ECNPESLGC 59
            C   C  ++ C +            C CN G++                 EC   S   
Sbjct: 4   GCARWCPQDSSCVNAT---------ACRCNPGFSSFSEIITTPMETCDDINECATLSKVS 54

Query: 60  NVVKNCHANAECVYNATSAGYRCQCAQGYVGNGVECHPLKSCLEDRSLCGKDSQGYVGNG 119
                C   ++C  N T   Y C C+ GY                             + 
Sbjct: 55  -----CGKFSDCW-N-TEGSYDCVCSPGYE-----------------PVSGAKTFKNESE 90

Query: 120 VECHPLKSCLEDRSLCGKDASCVVASQGHFHCECNEGFTGNGITC 164
             C  +  C   +  C     C   + G + C C  G+       
Sbjct: 91  NTCQDVDECSSGQHQCDSSTVCF-NTVGSYSCRCRPGWKPRHGIP 134

>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A Length = 285

 Score = 43.6 bits (102), Expect = 2e-05
 Identities = 16/60 (26%), Positives = 23/60 (38%), Gaps = 3/60 (5%)

Query: 64  NCHANAECVYNATSAGYRCQCAQGYVGNGVECHPLKSCLEDR-SLCGKDSQGYVGNGVEC 122
            C  +AEC     + G+ C+C   Y GNG +C    S       + G+   G     V  
Sbjct: 14  QCSVHAECR--DYATGFCCRCVANYTGNGRQCVAEGSPQRVNGKVKGRIFVGSSQVPVVF 71

>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens} Length = 551

 Score = 43.0 bits (101), Expect = 4e-05
 Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 2/54 (3%)

Query: 43 GYTGDGVTECNPESLGCNVVKN-CHANAECVYNATSAGYRCQCAQGYVGNGVEC 95
          G     V   + +    +   + CH +A+CV     +   C CA G+ GNG+ C
Sbjct: 6  GVPTSPVWWNSAQRFCPDGSPSECHEHADCVLERDGS-RSCVCAVGWAGNGILC 58

>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens} Length = 551

 Score = 42.6 bits (100), Expect = 4e-05
 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 2/53 (3%)

Query: 114 GYVGNGVE-CHPLKSCLED-RSLCGKDASCVVASQGHFHCECNEGFTGNGITC 164
           G   + V      + C +   S C + A CV+   G   C C  G+ GNGI C
Sbjct: 6   GVPTSPVWWNSAQRFCPDGSPSECHEHADCVLERDGSRSCVCAVGWAGNGILC 58

>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4 Length = 105

 Score = 40.1 bits (93), Expect = 5e-05
 Identities = 22/97 (22%), Positives = 30/97 (30%), Gaps = 11/97 (11%)

Query: 14  DTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPESLGCNVVK-NCHANAECV 72
           DT    NA C    +  E        C  G+   G  +C P S+ C      C   AEC 
Sbjct: 15  DTNVPENAACYRYLDGTEE-----WRCLLGFKEVG-GKCVPASITCEENNGGCAPEAECT 68

Query: 73  YNATSAGYRCQCAQG---YVGNGVECHPLKSCLEDRS 106
            +       C+C +     +  GV C           
Sbjct: 69  MDD-KKEVECKCTKEGSEPLFEGVFCSSSSGPHHHHH 104

>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A Length = 95

 Score = 37.3 bits (86), Expect = 4e-04
 Identities = 19/88 (21%), Positives = 26/88 (29%), Gaps = 10/88 (11%)

Query: 14 DTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPESLGCNVVK-NCHANAECV 72
          DT    NA C    +  E        C   +  D        ++ C      C   AEC 
Sbjct: 9  DTNVPENAACYRYLDGTEE-----WRCLLYFKEDAGKCVPAPNMTCKDKNGGCAPEAECK 63

Query: 73 YNATSAGYRCQCAQG---YVGNGVECHP 97
           N       C+C +     +  GV C  
Sbjct: 64 MN-DKNEIVCKCTKEGSEPLFEGVFCSH 90

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	222
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	99.85
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	99.83
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	99.83
2bou_A	143	EGF-like module containing mucin-like hormone rece	99.79
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	99.79
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	99.68
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	99.66
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	99.58
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	99.57
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	99.56
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	99.51
2bou_A	143	EGF-like module containing mucin-like hormone rece	99.45
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	99.45
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	99.45
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	99.42
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	99.42
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	99.39
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	99.38
1aut_L	114	Activated protein C; serine proteinase, plasma cal	99.36
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	99.36
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	99.34
2vh0_B	134	Activated factor XA light chain; serine protease,	99.33
4fbr_A	267	Lectin, myxobacterial hemagglutinin; beta-barrel,	99.33
1tpg_A	91	T-plasminogen activator F1-G; plasminogen activati	99.3
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	99.28
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	99.26
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	99.25
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	99.21
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	99.21
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	99.21
1aut_L	114	Activated protein C; serine proteinase, plasma cal	99.21
2vh0_B	134	Activated factor XA light chain; serine protease,	99.19
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	99.19
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	99.18
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	99.18
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	99.17
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	99.16
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	99.15
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	99.12
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	99.1
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	99.1
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	99.09
3v65_B	386	Low-density lipoprotein receptor-related protein;	99.07
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	98.98
4fbr_A	267	Lectin, myxobacterial hemagglutinin; beta-barrel,	98.96
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	98.91
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	98.91
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	98.82
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	98.82
1tpg_A	91	T-plasminogen activator F1-G; plasminogen activati	98.8
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	98.79
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	98.69
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	98.64
3v65_B	386	Low-density lipoprotein receptor-related protein;	98.64
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	98.62
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	98.55
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	98.46
3u7u_G	55	Neuregulin 1; signaling protein, transferase-trans	98.45
1kli_L	69	Factor VIIA; extrinsic coagulation pathway, serine	98.34
1egf_A	53	Epidermal growth factor; NMR {Mus musculus} SCOP:	98.31
3u7u_G	55	Neuregulin 1; signaling protein, transferase-trans	98.31
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	98.31
2k2s_B	61	Micronemal protein 6; microneme protein complex, c	98.3
2jkh_L	55	Factor X light chain; plasma, calcium, zymogen, se	98.28
1gl4_A	285	Nidogen-1, entactin; immunoglobulin-like domain, e	98.21
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	98.19
1ob1_C	99	Major merozoite surface protein; immune system, im	98.16
2k2s_B	61	Micronemal protein 6; microneme protein complex, c	98.14
2kl7_A	71	Fibulin-4; secreted, calcium, disease mutation, di	98.13
1k36_A	46	Epiregulin; EGF-like fold, hormone/growth factor c	98.12
2p28_B	217	Integrin beta-2; hybrid domain, PSI domain, I-EGF	98.11
1n1i_A	105	Merozoite surface protein-1; MSP1, malaria, surfac	98.1
1a3p_A	45	Epidermal growth factor; disulfide connectivities,	98.06
2bz6_L	53	Blood coagulation factor VIIA; serine protease, en	97.99
1egf_A	53	Epidermal growth factor; NMR {Mus musculus} SCOP:	97.96
1apq_A	53	Complement protease C1R; EGF, calcium binding, ser	97.95
1ob1_C	99	Major merozoite surface protein; immune system, im	97.94
1kig_L	51	Factor XA; glycoprotein, serine protease, plasma,	97.93
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	97.92
1hae_A	63	Heregulin-alpha; growth factor; NMR {Homo sapiens}	97.86
1klo_A	162	Laminin; glycoprotein; 2.10A {Mus musculus} SCOP:	97.72
1k36_A	46	Epiregulin; EGF-like fold, hormone/growth factor c	97.72
2jkh_L	55	Factor X light chain; plasma, calcium, zymogen, se	97.69
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	97.66
1gl4_A	285	Nidogen-1, entactin; immunoglobulin-like domain, e	97.64
4aqs_A	525	Laminin subunit beta-1; cell adhesion; HET: NAG BM	97.63
3ca7_A	52	Protein spitz; argos, EGF, developmental protein,	97.62
1n1i_A	105	Merozoite surface protein-1; MSP1, malaria, surfac	97.61
2wph_E	59	Coagulation factor IXA light chain; serine proteas	97.6
2kl7_A	71	Fibulin-4; secreted, calcium, disease mutation, di	97.59
1a3p_A	45	Epidermal growth factor; disulfide connectivities,	97.57
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	97.54
1hae_A	63	Heregulin-alpha; growth factor; NMR {Homo sapiens}	97.52
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	97.49
1nql_B	53	Epidermal growth factor; cell surface receptor, ty	97.4
1kig_L	51	Factor XA; glycoprotein, serine protease, plasma,	97.22
1kli_L	69	Factor VIIA; extrinsic coagulation pathway, serine	97.22
1apq_A	53	Complement protease C1R; EGF, calcium binding, ser	97.05
2bz6_L	53	Blood coagulation factor VIIA; serine protease, en	97.03
3ca7_A	52	Protein spitz; argos, EGF, developmental protein,	96.85
1szb_A	170	Mannose binding lectin-associated serine protease-	96.8
1g1s_A	162	P-selectin; selectin, lectin, EGF, sulphated, SLEX	96.74
2p28_B	217	Integrin beta-2; hybrid domain, PSI domain, I-EGF	96.72
2fd6_A	122	Urokinase-type plasminogen activator; UPAR, ATF, A	96.66
1g1s_A	162	P-selectin; selectin, lectin, EGF, sulphated, SLEX	96.57
1nql_B	53	Epidermal growth factor; cell surface receptor, ty	96.55
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	96.53
3ltf_D	58	Protein spitz; receptor-ligand complex ectodomain	96.48
4aqs_A	525	Laminin subunit beta-1; cell adhesion; HET: NAG BM	96.32
1q4g_A	553	Prostaglandin G/H synthase 1; cyclooxygenase, non-	96.22
3nt1_A	587	Prostaglandin-endoperoxide synthase 2; prostagland	96.2
2wph_E	59	Coagulation factor IXA light chain; serine proteas	95.81
3e50_C	50	Protransforming growth factor alpha; IDE, TGF-alph	95.8
3nt1_A	587	Prostaglandin-endoperoxide synthase 2; prostagland	95.67
3ltf_D	58	Protein spitz; receptor-ligand complex ectodomain	95.61
1q4g_A	553	Prostaglandin G/H synthase 1; cyclooxygenase, non-	95.46
3zyj_B	426	Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA	95.41
1nzi_A	159	Complement C1S component; calcium, innate immunity	95.31
3f1s_B	283	Vitamin K-dependent protein Z; PZ, ZPI, complex, s	95.29
1szb_A	170	Mannose binding lectin-associated serine protease-	95.23
1iox_A	50	Betacellulin; EGF-like fold, hormone/growth factor	94.99
1b9w_A	95	Protein (merozoite surface protein 1); MSP-1, cand	94.92
2rnl_A	50	Amphiregulin; AR, colorectum cell-derived growth f	94.65
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	94.49
3cfw_A	164	L-selectin; EGF, cell adhesion, EGF-like domain, g	94.44
1xdt_R	79	Hbegf, heparin-binding epidermal growth factor; co	94.36
3cfw_A	164	L-selectin; EGF, cell adhesion, EGF-like domain, g	93.48
1klo_A	162	Laminin; glycoprotein; 2.10A {Mus musculus} SCOP:	93.34
3e50_C	50	Protransforming growth factor alpha; IDE, TGF-alph	93.15
1iox_A	50	Betacellulin; EGF-like fold, hormone/growth factor	93.08
3fby_A	551	COMP, cartilage oligomeric matrix protein; signatu	92.36
2fd6_A	122	Urokinase-type plasminogen activator; UPAR, ATF, A	92.31
2rnl_A	50	Amphiregulin; AR, colorectum cell-derived growth f	92.0
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	91.85
1nzi_A	159	Complement C1S component; calcium, innate immunity	91.78
3asi_A	410	Neurexin-1-alpha; beta-sandwich, cell adhesion, sy	91.62
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	91.29
2i9a_A	145	Urokinase-type plasminogen activator; growth facto	91.07
1xdt_R	79	Hbegf, heparin-binding epidermal growth factor; co	90.36
1b9w_A	95	Protein (merozoite surface protein 1); MSP-1, cand	90.33
2ygo_A	188	WIF-1, WNT inhibitory factor 1; signaling protein,	89.32
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	89.15
1g1t_A	157	E-selectin; EGF, adhesion molecule, SLEX, immune s	89.1
3asi_A	410	Neurexin-1-alpha; beta-sandwich, cell adhesion, sy	88.61
1g1t_A	157	E-selectin; EGF, adhesion molecule, SLEX, immune s	87.7
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	86.28
3fby_A	551	COMP, cartilage oligomeric matrix protein; signatu	85.89
3qcw_A	1245	Neurexin-1-alpha; synaptic adhesion molecule, cell	85.82
3f1s_B	283	Vitamin K-dependent protein Z; PZ, ZPI, complex, s	85.72
3qcw_A	1245	Neurexin-1-alpha; synaptic adhesion molecule, cell	83.93
2i9a_A	145	Urokinase-type plasminogen activator; growth facto	83.72
3zyj_B	426	Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA	81.16

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*

Probab=99.85  E-value=3.8e-21  Score=141.64  Aligned_cols=120  Identities=28%  Similarity=0.754  Sum_probs=97.0

Q ss_pred             ccCCCCC---CCCCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCcccCCCCCCCCCCCCCCCEeeecCCCCCeEEe
Q psy5752           7 RFSLSEC---DTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPESLGCNVVKNCHANAECVYNATSAGYRCQ   83 (222)
Q Consensus         7 ~~~~~~C---~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~~~~~C~~~~~C~~~~~C~~~n~~g~~~C~   83 (222)
                      +.|||+|   +++|.++++|++.     .++| .|.|++||+|.   .|+...++|.. .+|.++++|+  +..++|+|.
T Consensus         2 c~dideC~~~~~~C~~~g~C~~~-----~g~~-~C~C~~Gy~G~---~C~~~~~~C~~-~~C~~~~~C~--~~~g~~~C~   69 (135)
T 2vj3_A            2 AQDVDECSLGANPCEHAGKCINT-----LGSF-ECQCLQGYTGP---RCEIDVNECVS-NPCQNDATCL--DQIGEFQCI   69 (135)
T ss_dssp             -CCCCTTTSSSCSSSTTCEEEEC-----SSSE-EEECCTTEEST---TSCEECCTTTT-CCCCSSCEEE--ECSSCEEEE
T ss_pred             CcccccccCCCCCCCCCCEeECC-----CCCE-EEECCCCCcCC---cccccCccCCC-CCCCCCCEEe--CCCCCceee
Confidence            6799999   4799999999993     6676 99999999998   89744446987 8999999997  888999999


Q ss_pred             cCCCCccCCCeeecCCCcCCCCCCCCCCCCCcccCCCccc-cCCCCCCCCCCCCCCCeeeeCCCCeeEeecCCCCccCCC
Q psy5752          84 CAQGYVGNGVECHPLKSCLEDRSLCGKDSQGYVGNGVECH-PLKSCLEDRSLCGKDASCVVASQGHFHCECNEGFTGNGI  162 (222)
Q Consensus        84 C~~G~~~~~~~C~~~~~C~~~~~~C~~c~~g~~~~g~~C~-~id~C~~~~~~C~~~~~C~n~~~g~~~C~C~~G~~gd~~  162 (222)
                      |++||+|.                             .|+ ++++|...  .|.++++|++.. ++|+|.|++||+|  .
T Consensus        70 C~~G~~G~-----------------------------~C~~~~~~C~~~--~C~~~g~C~~~~-g~~~C~C~~G~~G--~  115 (135)
T 2vj3_A           70 CMPGYEGV-----------------------------HCEVNTDECASS--PCLHNGRCLDKI-NEFQCECPTGFTG--H  115 (135)
T ss_dssp             CCTTEESS-----------------------------SSCEECCTTTTC--CSTTTCEEEECS-SCEEEECCTTEES--S
T ss_pred             CCCCCcCC-----------------------------cceecCCcccCC--CcCCCCEeECCC-CCeEEECCCCCcC--C
Confidence            99999876                             443 57888754  498889999997 5599999999998  6


Q ss_pred             ccc-cCCCCCC
Q psy5752         163 TCK-PVRKKES  172 (222)
Q Consensus       163 ~C~-~~~~~~~  172 (222)
                      .|+ ++++|..
T Consensus       116 ~C~~~i~~C~~  126 (135)
T 2vj3_A          116 LCQVDLHHILD  126 (135)
T ss_dssp             SSCEECC----
T ss_pred             ccCccCccccC
Confidence            885 6777654

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*

Probab=99.83  E-value=1e-20  Score=169.37  Aligned_cols=141  Identities=28%  Similarity=0.726  Sum_probs=111.4

Q ss_pred             cCCCCC-CCCCCCCCeecCCCCCCCCCCceee-ecCCCCccCCCCCcccCCCCCCC-CCCCCCCC---EeeecCCCCCeE
Q psy5752           8 FSLSEC-DTPCHPNAQCTSPDEFNESREQAKC-ICNFGYTGDGVTECNPESLGCNV-VKNCHANA---ECVYNATSAGYR   81 (222)
Q Consensus         8 ~~~~~C-~~~C~~~~~C~~~~~~~~~g~~~~C-~C~~G~~g~~~~~C~~~~~~C~~-~~~C~~~~---~C~~~n~~g~~~   81 (222)
                      +||++| ++||.++++|++..    .++| +| .|++||+|++. .|+++++ |.. ++.|.+++   +|+  ++.++|+
T Consensus         1 ~DIDeC~~nPC~~gg~C~n~~----~Gsy-~C~~C~~GytGdg~-~CeDiDE-C~~~p~~C~~gg~~~~Cv--Nt~gsY~   71 (634)
T 1yo8_A            1 ADPDGCLSNPCFPGAQCSSFP----DGSW-SCGFCPVGFLGNGT-HCEDLDE-CALVPDICFSTSKVPRCV--NTQPGFH   71 (634)
T ss_dssp             ---CGGGGCCSCTTCCEEECT----TSCE-EECCCCTTBCSCSS-SCCBCCT-TTTSCCCSCCCSSSCCEE--ECSSSEE
T ss_pred             CcccccCCCCCCCCCEEecCC----CCCe-ECCcCCCccCCCCC-Ccccccc-ccCCCCcccCCcccccee--eccCcee
Confidence            478999 89999999999952    3446 99 99999999777 9998774 987 34499988   997  8999999


Q ss_pred             Ee-cCCCCccCCCeeecCCCcCCCCCCCCCCCCCcccCCCccccCCCCCCCCCCCCCCCeeeeCCC---CeeEeecCCCC
Q psy5752          82 CQ-CAQGYVGNGVECHPLKSCLEDRSLCGKDSQGYVGNGVECHPLKSCLEDRSLCGKDASCVVASQ---GHFHCECNEGF  157 (222)
Q Consensus        82 C~-C~~G~~~~~~~C~~~~~C~~~~~~C~~c~~g~~~~g~~C~~id~C~~~~~~C~~~~~C~n~~~---g~~~C~C~~G~  157 (222)
                      |. |++||+|..+....+..+.              .++..|+++++|...++.|.++++|+++.+   ++|+|.|++||
T Consensus        72 C~~C~~Gy~G~~c~g~g~~~~~--------------~dg~~C~dideC~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy  137 (634)
T 1yo8_A           72 CLPCPPRYRGNQPVGVGLEAAK--------------TEKQVCEPENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGY  137 (634)
T ss_dssp             ECCCCTTEEECCCEESSSHHHH--------------SCCCCEEECCTTTTTCCCCCTTEEEEECCTTCSSSEEEEECTTE
T ss_pred             cccCCCCcccCccccccccccc--------------cCCCcccccccccCCCcccccCccccccccccccceeeeccCCc
Confidence            98 9999998876533322211              234579999999877678999999999861   55999999999


Q ss_pred             ccCCCccc---cCCCCC
Q psy5752         158 TGNGITCK---PVRKKE  171 (222)
Q Consensus       158 ~gd~~~C~---~~~~~~  171 (222)
                      .|++..|+   ++++|.
T Consensus       138 ~GdG~~Ce~d~DiDeC~  154 (634)
T 1yo8_A          138 AGDGLICGEDSDLDGWP  154 (634)
T ss_dssp             EESSSSEEECTTSSSSC
T ss_pred             cccCcccccccCccccc
Confidence            99999997   677765

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A

Probab=99.83  E-value=3.9e-21  Score=149.02  Aligned_cols=146  Identities=21%  Similarity=0.453  Sum_probs=115.4

Q ss_pred             CCCCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCcccCCCCCCC---CCCCCCCCEeeecCCC-----CCeEEecC
Q psy5752          14 DTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPESLGCNV---VKNCHANAECVYNATS-----AGYRCQCA   85 (222)
Q Consensus        14 ~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~~~~~C~~---~~~C~~~~~C~~~n~~-----g~~~C~C~   85 (222)
                      ++||.| ++|++.     .++| +|.|++||+|.....|++++ +|..   ..+|.++++|+  ++.     ++|+|.|+
T Consensus        10 ~~pC~n-g~C~~~-----~g~~-~C~C~~G~~g~~~~~C~~id-~C~~~~~~~~C~~~~~C~--~~~~~~~~g~y~C~C~   79 (186)
T 1z1y_A           10 DTICXN-GQLVQM-----SNHF-XCMCNEGLVHLSENTCEEXN-ECXXETLGXACGEFGQCI--ENPDPAQVNMYXCGCI   79 (186)
T ss_dssp             TCCCBT-EEEEEC-----SSCE-EEEECTTEEEEETTEEEECC-CCSGGGTTSEEETTEEEE--ECSSTTSSCSEEEEEC
T ss_pred             CCCCCC-CEeECC-----CCCe-EeECCCCCccCCCCccCCCC-cccCCCCCCCCCCCCEee--cCCCCcCCCCEECCCC
Confidence            689985 599994     6676 99999999986333899877 4983   27899999997  777     89999999


Q ss_pred             CCCccCCCeeecCCCcCCCCCCCCCCCCCcccCCCccccCCCCCCCCCCCCCCCeee----eCCCCeeEeecCCCCcc--
Q psy5752          86 QGYVGNGVECHPLKSCLEDRSLCGKDSQGYVGNGVECHPLKSCLEDRSLCGKDASCV----VASQGHFHCECNEGFTG--  159 (222)
Q Consensus        86 ~G~~~~~~~C~~~~~C~~~~~~C~~c~~g~~~~g~~C~~id~C~~~~~~C~~~~~C~----n~~~g~~~C~C~~G~~g--  159 (222)
                      +||+++...                           |. +++|...+  |.++++|+    ++. ++|+|.|++||+|  
T Consensus        80 ~G~~g~~~~---------------------------C~-~d~C~~~~--C~~~g~C~~~~~~~~-g~~~C~C~~Gy~g~~  128 (186)
T 1z1y_A           80 EGYTLXEDT---------------------------CV-LDVCQYXN--CGESGECIVEYLSEI-QSAGCSCAIGXVPNP  128 (186)
T ss_dssp             TTEEEETTE---------------------------EE-EGGGTTCC--CCTTEEEEEEEETTE-EEEEEEECTEEEEET
T ss_pred             CCCccCCCC---------------------------CC-CCcCcCCC--CCCCCEEeeCCcCCC-CCceEECCCCCcccC
Confidence            999987653                           33 57776554  98889999    775 5699999999998  


Q ss_pred             -CCCccccC--CCC------CCCeeeecCCcEEEEcCCCCCCCCCCCcee
Q psy5752         160 -NGITCKPV--RKK------ESDFLLVNQGMFMLRVPYQPTRTDRGRPII  200 (222)
Q Consensus       160 -d~~~C~~~--~~~------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  200 (222)
                       ++..|+++  ++|      ....|+++.|+|.|.|+.++.+....+.+.
T Consensus       129 ~~~~~C~~~~~~~C~~~C~~~~~~C~n~~g~y~C~C~~G~~g~~~~~~~~  178 (186)
T 1z1y_A          129 EDEXXCTXTGETACQLXCNTDNEVCXNVEGVYXCQCMEGFTFDXEXNVCL  178 (186)
T ss_dssp             TTTTEEEEEECCCCCCCCCTTTEEEEEETTEEEEEECTTCEEETTTTEEE
T ss_pred             CCCCcceEcCCCcccccccccCcceecCCCCeeeECCCCCccCcccccCC
Confidence             77889875  443      245789999999999998887765555543

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A

Probab=99.79  E-value=1.6e-19  Score=134.18  Aligned_cols=129  Identities=19%  Similarity=0.548  Sum_probs=98.6

Q ss_pred             CCCCCCCCCCCeecCCCCCCCCCCceeeecCCCCccCC------CCCcccCCCCCCCC--CCCCCCCEeeecCCCCCeEE
Q psy5752          11 SECDTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDG------VTECNPESLGCNVV--KNCHANAECVYNATSAGYRC   82 (222)
Q Consensus        11 ~~C~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~------~~~C~~~~~~C~~~--~~C~~~~~C~~~n~~g~~~C   82 (222)
                      ..|+++|.++++|++      .  | .|.|++||+|..      ...|+++++ |...  .+|.+++.|+  ++.++|+|
T Consensus         3 ~~C~~~C~~~~~C~~------~--~-~C~C~~G~~g~~~~~~~~~~~C~dide-C~~~~~~~C~~~~~C~--n~~g~y~C   70 (143)
T 2bou_A            3 RGCARWCPQDSSCVN------A--T-ACRCNPGFSSFSEIITTPMETCDDINE-CATLSKVSCGKFSDCW--NTEGSYDC   70 (143)
T ss_dssp             CCCCTTCCTTEEESS------S--S-CEEECTTEECSSSSBCSTTCCCEECCG-GGC----CCCTTEEEE--ECSSCEEE
T ss_pred             CCCcCcCCCCCEEcC------C--C-EEeCCCCCcCccccccCCCCcCCcccc-ccCCCCCCCCCCCEEE--cCCCCeEe
Confidence            457789999999988      2  4 899999999841      128988774 9872  3899899997  89999999


Q ss_pred             ecCCCCccCCCeeecCCCcCCCCCCCCCCCCCcc-cCCCccccCCCCCCCCCCCCCCCeeeeCCCCeeEeecCCCCcc--
Q psy5752          83 QCAQGYVGNGVECHPLKSCLEDRSLCGKDSQGYV-GNGVECHPLKSCLEDRSLCGKDASCVVASQGHFHCECNEGFTG--  159 (222)
Q Consensus        83 ~C~~G~~~~~~~C~~~~~C~~~~~~C~~c~~g~~-~~g~~C~~id~C~~~~~~C~~~~~C~n~~~g~~~C~C~~G~~g--  159 (222)
                      .|++||++....-                  .+. ..+..|++||+|...++.|.++++|+|+. |+|+|.|++||++  
T Consensus        71 ~C~~Gy~g~~~~~------------------~~~~~~~~~C~dideC~~~~~~C~~~~~C~n~~-g~y~C~C~~Gy~g~~  131 (143)
T 2bou_A           71 VCSPGYEPVSGAK------------------TFKNESENTCQDVDECSSGQHQCDSSTVCFNTV-GSYSCRCRPGWKPRH  131 (143)
T ss_dssp             EECTTEEETTCCS------------------CBSSGGGCCEEECCHHHHTCCCCCTTSEEEECS-SCEEEECCSSSCBCT
T ss_pred             ECCCCcccCcCcc------------------ccccCCCCCcCCccCccCcCCCCCCCCEEECCC-CCEEeeCCCCcccCC
Confidence            9999999864310                  000 12347889999987667799889999997 5599999999997  


Q ss_pred             CCCccccCCCC
Q psy5752         160 NGITCKPVRKK  170 (222)
Q Consensus       160 d~~~C~~~~~~  170 (222)
                      ++..|..++.|
T Consensus       132 ~~~~C~~~~~C  142 (143)
T 2bou_A          132 GIPNNQKDTVC  142 (143)
T ss_dssp             TCCSSBTTCCB
T ss_pred             CCccCccCCcc
Confidence            34567776654

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}

Probab=99.79  E-value=4.7e-19  Score=131.50  Aligned_cols=110  Identities=26%  Similarity=0.721  Sum_probs=84.8

Q ss_pred             CCC-CCCCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCcccC------------CCCCCCCCCCCCCCEeeec---
Q psy5752          11 SEC-DTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPE------------SLGCNVVKNCHANAECVYN---   74 (222)
Q Consensus        11 ~~C-~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~~------------~~~C~~~~~C~~~~~C~~~---   74 (222)
                      |+| ++||.++++|++...   .++| .|.|++||+|.   .|+.+            .++|.. .+|.++++|+..   
T Consensus         1 d~C~~~pC~~~g~C~~~~~---~g~~-~C~C~~G~~G~---~C~~~~~~~~~~~~c~~~~~C~~-~~C~~~g~C~~~~~~   72 (143)
T 4d90_A            1 DICDPNPCENGGICLPGLA---DGSF-SCECPDGFTDP---NCSSVVEVASDEEEPTSAGPCTP-NPCHNGGTCEISEAY   72 (143)
T ss_dssp             --CCSCCCGGGCEEEC--------CC-EEECCTTCCTT---TTCSCCCCTTTTTSCCCCCTTSS-CCCCTTCEEEECCCE
T ss_pred             CcCCCCcCCCCCEeeCCCC---CCCE-EeECCCCCCCC---CCccCccccccccccccCCcCCC-CCCCCCCEecCCCcc
Confidence            578 899999999998532   2566 99999999998   77652            234776 889999999510   


Q ss_pred             --CCCCCeEEecCCCCccCCCeeecCCCcCCCCCCCCCCCCCcccCCCccc-cCCCCCCCCCCCCCCCeeeeCCCCeeEe
Q psy5752          75 --ATSAGYRCQCAQGYVGNGVECHPLKSCLEDRSLCGKDSQGYVGNGVECH-PLKSCLEDRSLCGKDASCVVASQGHFHC  151 (222)
Q Consensus        75 --n~~g~~~C~C~~G~~~~~~~C~~~~~C~~~~~~C~~c~~g~~~~g~~C~-~id~C~~~~~~C~~~~~C~n~~~g~~~C  151 (222)
                        ++.++|+|.|++||.|.                             .|+ ++++|...+  |.++++|+++. ++|+|
T Consensus        73 ~~~~~~~~~C~C~~G~~G~-----------------------------~C~~~i~~C~~~~--C~~~~~C~~~~-g~~~C  120 (143)
T 4d90_A           73 RGDTFIGYVCKCPRGFNGI-----------------------------HCQHNINECEVEP--CKNGGICTDLV-ANYSC  120 (143)
T ss_dssp             ETTEECCEEEECCTTEEST-----------------------------TSCEECCTTTTCC--SCTTCEEEEET-TEEEE
T ss_pred             ccCCCCCeEeECcCCCcCC-----------------------------CcccCCCcCCCCC--CCCCCEeECCC-CCeEe
Confidence              45679999999999765                             565 788897554  99899999996 66999


Q ss_pred             ecCCCCccC
Q psy5752         152 ECNEGFTGN  160 (222)
Q Consensus       152 ~C~~G~~gd  160 (222)
                      .|++||+|+
T Consensus       121 ~C~~G~~G~  129 (143)
T 4d90_A          121 ECPGEFMGR  129 (143)
T ss_dssp             ECCTTCBST
T ss_pred             ECCCCCccC
Confidence            999999993

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A

Probab=99.68  E-value=5.7e-18  Score=128.33  Aligned_cols=139  Identities=22%  Similarity=0.516  Sum_probs=94.5

Q ss_pred             cCCCCC--CCCCCCCCeecCCCCCCCCCCceeeecCCCCccC--CCCCcccCCC-CCCC-CCCC--CCCCEeeecCCCC-
Q psy5752           8 FSLSEC--DTPCHPNAQCTSPDEFNESREQAKCICNFGYTGD--GVTECNPESL-GCNV-VKNC--HANAECVYNATSA-   78 (222)
Q Consensus         8 ~~~~~C--~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~--~~~~C~~~~~-~C~~-~~~C--~~~~~C~~~n~~g-   78 (222)
                      .|||||  ++||. +++|++  +   .++| +|.|++||++.  +. .|+++++ +|.. ..+|  ..++.|+  +..+ 
T Consensus         1 ~dideC~~~~~C~-~~~C~n--~---~gsy-~C~C~~Gy~~~~~g~-~C~d~~~~~C~~~~~~c~~~~~~~C~--~~~~~   70 (162)
T 1uzk_A            1 TDVNECLDPTTCI-SGNCVN--T---PGSY-ICDCPPDFELNPTRV-GCVDTRSGNCYLDIRPRGDNGDTACS--NEIGV   70 (162)
T ss_dssp             CCCCGGGSTTSSB-TSEEEE--E---TTEE-EEECCTTCEECTTSS-BEECCCCEEEEEEC----------CE--EEEEE
T ss_pred             CccccCCCCCCCC-CCEeEC--C---CCCE-EEeCCCCCeECCCCC-cccCCCCCcccCCCcccCCCCCCccc--CCcCC
Confidence            489999  48997 689999  4   6777 99999999943  33 8987652 2764 2334  2467896  6666 


Q ss_pred             ---CeEEecCCCCc-cCCCeeecCCCcCCCCC---CCCCCCC--CcccC--CCccccCCCCCCCCCCCCCCCeeeeCCCC
Q psy5752          79 ---GYRCQCAQGYV-GNGVECHPLKSCLEDRS---LCGKDSQ--GYVGN--GVECHPLKSCLEDRSLCGKDASCVVASQG  147 (222)
Q Consensus        79 ---~~~C~C~~G~~-~~~~~C~~~~~C~~~~~---~C~~c~~--g~~~~--g~~C~~id~C~~~~~~C~~~~~C~n~~~g  147 (222)
                         +|.|.|++||. +...  +   .|.....   .| .|..  ||+++  +..|++||||+..++.|.+ ++|+|+. |
T Consensus        71 ~~~~~~C~C~~G~~~~~~C--~---~C~~~~~~~y~C-~C~~g~G~~~~~~~~~c~dideC~~~~~~C~~-g~C~n~~-g  142 (162)
T 1uzk_A           71 GVSKASCCCSLGKAWGTPC--E---MCPAVNTSEYKI-LCPGGEGFRPNPITVILEDIDECQELPGLCQG-GKCINTF-G  142 (162)
T ss_dssp             EECHHHHHTTTCCEETTTT--E---ECCCTTSHHHHH-HCTTCTTEEECTTTCCEEECCHHHHCGGGGBT-SEEEECS-S
T ss_pred             cccCceeeCCCCCCcCCCc--c---cCCCCCCCCcee-ECCCCCCcccCCCCCccCccccccCCCCCcCC-CEeEcCC-C
Confidence               89999999998 4332  2   1221100   01 1444  88765  4678999999877777975 6999997 5


Q ss_pred             eeEeecCCCCcc--CCCcc
Q psy5752         148 HFHCECNEGFTG--NGITC  164 (222)
Q Consensus       148 ~~~C~C~~G~~g--d~~~C  164 (222)
                      +|+|.|++||++  |+++|
T Consensus       143 sy~C~C~~Gy~g~~d~~~C  161 (162)
T 1uzk_A          143 SFQCRCPTGYYLNEDTRVC  161 (162)
T ss_dssp             CEEEECCTTCCBCTTTCBB
T ss_pred             CEEeeCCCCccCCCCCCcc
Confidence            599999999997  44555

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A

Probab=99.66  E-value=2.6e-17  Score=127.36  Aligned_cols=118  Identities=28%  Similarity=0.593  Sum_probs=91.7

Q ss_pred             CccCCCCCC-----CCCCCCCeecCCCCCCCC-----CCceeeecCCCCccCCCCCcccCCCCCCCCCCCCCCCEeeec-
Q psy5752           6 IRFSLSECD-----TPCHPNAQCTSPDEFNES-----REQAKCICNFGYTGDGVTECNPESLGCNVVKNCHANAECVYN-   74 (222)
Q Consensus         6 ~~~~~~~C~-----~~C~~~~~C~~~~~~~~~-----g~~~~C~C~~G~~g~~~~~C~~~~~~C~~~~~C~~~~~C~~~-   74 (222)
                      .|.++|+|.     .+|.++++|++.     .     ++| .|.|++||+|+.. .|+ ++ +|.. .+|.+++.|+.. 
T Consensus        40 ~C~~id~C~~~~~~~~C~~~~~C~~~-----~~~~~~g~y-~C~C~~G~~g~~~-~C~-~d-~C~~-~~C~~~g~C~~~~  109 (186)
T 1z1y_A           40 TCEEXNECXXETLGXACGEFGQCIEN-----PDPAQVNMY-XCGCIEGYTLXED-TCV-LD-VCQY-XNCGESGECIVEY  109 (186)
T ss_dssp             EEEECCCCSGGGTTSEEETTEEEEEC-----SSTTSSCSE-EEEECTTEEEETT-EEE-EG-GGTT-CCCCTTEEEEEEE
T ss_pred             ccCCCCcccCCCCCCCCCCCCEeecC-----CCCcCCCCE-ECCCCCCCccCCC-CCC-CC-cCcC-CCCCCCCEEeeCC
Confidence            577899992     579999999994     4     676 9999999999854 566 34 5987 889999999511 


Q ss_pred             -CCCCCeEEecCCCCccCCCeeecCCCcCCCCCCCCCCCCCcccCCCccccC--CCCCCCCCCC-CCCCeeeeCCCCeeE
Q psy5752          75 -ATSAGYRCQCAQGYVGNGVECHPLKSCLEDRSLCGKDSQGYVGNGVECHPL--KSCLEDRSLC-GKDASCVVASQGHFH  150 (222)
Q Consensus        75 -n~~g~~~C~C~~G~~~~~~~C~~~~~C~~~~~~C~~c~~g~~~~g~~C~~i--d~C~~~~~~C-~~~~~C~n~~~g~~~  150 (222)
                       ++.++|+|.|++||++...                        ++..|+++  ++|..   .| .++++|+++. ++|+
T Consensus       110 ~~~~g~~~C~C~~Gy~g~~~------------------------~~~~C~~~~~~~C~~---~C~~~~~~C~n~~-g~y~  161 (186)
T 1z1y_A          110 LSEIQSAGCSCAIGXVPNPE------------------------DEXXCTXTGETACQL---XCNTDNEVCXNVE-GVYX  161 (186)
T ss_dssp             ETTEEEEEEEECTEEEEETT------------------------TTTEEEEEECCCCCC---CCCTTTEEEEEET-TEEE
T ss_pred             cCCCCCceEECCCCCcccCC------------------------CCCcceEcCCCcccc---cccccCcceecCC-CCee
Confidence             7788999999999998321                        12255544  77863   59 7889999996 6699


Q ss_pred             eecCCCCccCC
Q psy5752         151 CECNEGFTGNG  161 (222)
Q Consensus       151 C~C~~G~~gd~  161 (222)
                      |.|++||+|+.
T Consensus       162 C~C~~G~~g~~  172 (186)
T 1z1y_A          162 CQCMEGFTFDX  172 (186)
T ss_dssp             EEECTTCEEET
T ss_pred             eECCCCCccCc
Confidence            99999999843

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}

Probab=99.58  E-value=7.7e-17  Score=120.13  Aligned_cols=119  Identities=24%  Similarity=0.571  Sum_probs=75.4

Q ss_pred             cCCCCC-CCCCCCCCeecCCCCCCCCCCceeeecCCCCccCCC-CCcccCCC-CCCC----------CCCCCCCCEeeec
Q psy5752           8 FSLSEC-DTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGV-TECNPESL-GCNV----------VKNCHANAECVYN   74 (222)
Q Consensus         8 ~~~~~C-~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~-~~C~~~~~-~C~~----------~~~C~~~~~C~~~   74 (222)
                      .|||+| ++||.+ ++|++  +   .++| .|.|++||+|+.- ..|.+... +|..          ...|...+.|.  
T Consensus         2 ~dideC~~~pC~n-g~C~n--~---~g~y-~C~C~~G~~g~~~~~~C~~~~~~~C~~~~~g~~C~~~~~~c~~~~~C~--   72 (147)
T 2w86_A            2 ADIDECESSPCIN-GVCKN--S---PGSF-ICECSSESTLDPTKTICIETIKGTCWQTVIDGRCEININGATLKSQCC--   72 (147)
T ss_dssp             CCCCGGGGCCSBT-SEEEE--E---TTEE-EEECCTTEEECTTSSBEEECCCEEEEEEEETTEEEEEEEEEECHHHHH--
T ss_pred             CcCccCcCCCCCC-CEeEC--C---CCCE-EeECCCCcccCCCCCeecCCCCCcccCCCCCCccccCCCccccCCccc--
Confidence            589999 899985 79999  4   6777 9999999997621 14544321 0110          00010011111  


Q ss_pred             CCCCC----------eEEecCCCCccCCCeeecCCCcCCCCCCCCCCCCCccc-CCCccccCCCCCCCCCCCCCCCeeee
Q psy5752          75 ATSAG----------YRCQCAQGYVGNGVECHPLKSCLEDRSLCGKDSQGYVG-NGVECHPLKSCLEDRSLCGKDASCVV  143 (222)
Q Consensus        75 n~~g~----------~~C~C~~G~~~~~~~C~~~~~C~~~~~~C~~c~~g~~~-~g~~C~~id~C~~~~~~C~~~~~C~n  143 (222)
                      +..++          |.|.                           |.+||++ +|+.|++||+|+..++.|.+ ++|+|
T Consensus        73 ~~~g~~~g~~C~~c~~~C~---------------------------C~~Gy~~~~g~~C~dideC~~~~~~C~~-g~C~n  124 (147)
T 2w86_A           73 SSLGAAWGSPCTLCQVDPI---------------------------CGKGYSRIKGTQCEDIDECEVFPGVCKN-GLCVN  124 (147)
T ss_dssp             TTTCSEETTTTEECCCCTT---------------------------TCTTEEEEETTEEEECCHHHHSTTCSSS-SEEEE
T ss_pred             cCcCcccCCCcccCCCccc---------------------------CCCccccCCCCccCccccccCCCCCCCC-CEEEC
Confidence            11111          2333                           4555542 35588899999877788985 59999


Q ss_pred             CCCCeeEeecCCCCccC--CCcc
Q psy5752         144 ASQGHFHCECNEGFTGN--GITC  164 (222)
Q Consensus       144 ~~~g~~~C~C~~G~~gd--~~~C  164 (222)
                      +. |+|+|.|++||+++  +++|
T Consensus       125 ~~-g~y~C~C~~Gy~g~~~~~~C  146 (147)
T 2w86_A          125 TR-GSFKCQCPSGMTLDATGRIC  146 (147)
T ss_dssp             ET-TEEEEECCTTCCBCTTSSCB
T ss_pred             CC-CCEEeeCCCCCccCCCCCee
Confidence            96 66999999999974  4555

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A

Probab=99.57  E-value=8.8e-16  Score=110.19  Aligned_cols=105  Identities=26%  Similarity=0.679  Sum_probs=78.7

Q ss_pred             cCCCCC-CCCCCCCCeecCCCCCCCCCCceeeecCCCCccCCC--CCcccCCCCCCCCCCCCCCCEeeecCCCCCeEEec
Q psy5752           8 FSLSEC-DTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGV--TECNPESLGCNVVKNCHANAECVYNATSAGYRCQC   84 (222)
Q Consensus         8 ~~~~~C-~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~--~~C~~~~~~C~~~~~C~~~~~C~~~n~~g~~~C~C   84 (222)
                      .|||+| ++||.+  +|++..    .++| .|.|++||+|...  +.|.+   +|.. .+|.  +.|+  + .++|+|.|
T Consensus         2 ~dideC~~~pC~~--~C~~~~----~g~y-~C~C~~Gy~g~~~~~~~C~~---~C~~-~~C~--~~C~--~-~~~y~C~C   65 (118)
T 1dx5_I            2 EPVDPCFRANCEY--QCQPLD----QTSY-LCVCAEGFAPIPHEPHRCQM---FCNQ-TACP--ADCD--P-NTQASCEC   65 (118)
T ss_dssp             CCCCGGGGCCCSS--EEEECS----SSCE-EEECCTTEEEETTEEEEEEE---CCCS-SEEE--CEEC--T-TSTTCEEC
T ss_pred             CccccCCCCCCCC--CCCCCC----CCCE-EeECCCCccccCCCCCcccc---ccCC-CCCC--Cccc--C-CCCeEeEC
Confidence            378999 899985  999951    3556 9999999998721  13433   2544 6664  6896  6 58999999


Q ss_pred             CCCCccC-CCeeecCCCcCCCCCCCCCCCCCcccCCCccccCCCCCCCCCCCCCCCeeeeCCCCeeEeecCCCCcc
Q psy5752          85 AQGYVGN-GVECHPLKSCLEDRSLCGKDSQGYVGNGVECHPLKSCLEDRSLCGKDASCVVASQGHFHCECNEGFTG  159 (222)
Q Consensus        85 ~~G~~~~-~~~C~~~~~C~~~~~~C~~c~~g~~~~g~~C~~id~C~~~~~~C~~~~~C~n~~~g~~~C~C~~G~~g  159 (222)
                      ++||+++ +.                           .|++||+|+. .+.|  +++|+|+. ++|+|.|++||++
T Consensus        66 ~~Gy~~~~g~---------------------------~C~dideC~~-~~~C--~~~C~n~~-g~y~C~C~~G~~g  110 (118)
T 1dx5_I           66 PEGYILDDGF---------------------------ICTDIDECEN-GGFC--SGVCHNLP-GTFECICGPDSAL  110 (118)
T ss_dssp             CTTEEEETTT---------------------------EEEECCHHHH-CSSC--SSEEEECS-SSEEEEECSSSSC
T ss_pred             CCCccCCCCC---------------------------ccccccccCC-CCCC--cCeEEeCC-CCEEEECCCCCcc
Confidence            9999855 33                           6677888865 2458  57999997 5599999999996

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*

Probab=99.56  E-value=2.4e-14  Score=105.03  Aligned_cols=106  Identities=26%  Similarity=0.668  Sum_probs=83.7

Q ss_pred             cccCCCCCCC-CCCCCCCCEeeecCCCCCeEEecCCCCccCCCeeecCCCcCCCCCCCCCCCCCcccCCCccc-cCCCCC
Q psy5752          52 CNPESLGCNV-VKNCHANAECVYNATSAGYRCQCAQGYVGNGVECHPLKSCLEDRSLCGKDSQGYVGNGVECH-PLKSCL  129 (222)
Q Consensus        52 C~~~~~~C~~-~~~C~~~~~C~~~n~~g~~~C~C~~G~~~~~~~C~~~~~C~~~~~~C~~c~~g~~~~g~~C~-~id~C~  129 (222)
                      |++++ +|.. .++|.++++|+  ++.++|+|.|++||+|.                             .|+ ++++|.
T Consensus         2 c~did-eC~~~~~~C~~~g~C~--~~~g~~~C~C~~Gy~G~-----------------------------~C~~~~~~C~   49 (135)
T 2vj3_A            2 AQDVD-ECSLGANPCEHAGKCI--NTLGSFECQCLQGYTGP-----------------------------RCEIDVNECV   49 (135)
T ss_dssp             -CCCC-TTTSSSCSSSTTCEEE--ECSSSEEEECCTTEEST-----------------------------TSCEECCTTT
T ss_pred             Ccccc-cccCCCCCCCCCCEeE--CCCCCEEEECCCCCcCC-----------------------------cccccCccCC
Confidence            55666 4984 48999999997  88999999999999876                             343 678887


Q ss_pred             CCCCCCCCCCeeeeCCCCeeEeecCCCCccCCCccc-cCCCCC------CCeeeecCCcEEEEcCCCCCCCC
Q psy5752         130 EDRSLCGKDASCVVASQGHFHCECNEGFTGNGITCK-PVRKKE------SDFLLVNQGMFMLRVPYQPTRTD  194 (222)
Q Consensus       130 ~~~~~C~~~~~C~n~~~g~~~C~C~~G~~gd~~~C~-~~~~~~------~~~~~~~~g~~~~~~~~~~~~~~  194 (222)
                      ..+  |.++++|++.. ++|+|.|++||+|  ..|+ ++++|.      ...|+++.++|.|.|+.++.+..
T Consensus        50 ~~~--C~~~~~C~~~~-g~~~C~C~~G~~G--~~C~~~~~~C~~~~C~~~g~C~~~~g~~~C~C~~G~~G~~  116 (135)
T 2vj3_A           50 SNP--CQNDATCLDQI-GEFQCICMPGYEG--VHCEVNTDECASSPCLHNGRCLDKINEFQCECPTGFTGHL  116 (135)
T ss_dssp             TCC--CCSSCEEEECS-SCEEEECCTTEES--SSSCEECCTTTTCCSTTTCEEEECSSCEEEECCTTEESSS
T ss_pred             CCC--CCCCCEEeCCC-CCceeeCCCCCcC--CcceecCCcccCCCcCCCCEeECCCCCeEEECCCCCcCCc
Confidence            644  98889999997 4599999999998  5665 455543      35789999999999998877543

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}

Probab=99.51  E-value=1.2e-13  Score=102.09  Aligned_cols=117  Identities=18%  Similarity=0.462  Sum_probs=86.7

Q ss_pred             CCCCCCCCCCCCEeeecCCC--CCeEEecCCCCccCCCeeecCCCcCCCCCCCCCCCCCcccCCCccccCCCCCCCCCCC
Q psy5752          58 GCNVVKNCHANAECVYNATS--AGYRCQCAQGYVGNGVECHPLKSCLEDRSLCGKDSQGYVGNGVECHPLKSCLEDRSLC  135 (222)
Q Consensus        58 ~C~~~~~C~~~~~C~~~n~~--g~~~C~C~~G~~~~~~~C~~~~~C~~~~~~C~~c~~g~~~~g~~C~~id~C~~~~~~C  135 (222)
                      +|.+ .+|.++++|+  +..  ++|+|.|++||+|..  |+.+.++...              ...|.++++|...+  |
T Consensus         2 ~C~~-~pC~~~g~C~--~~~~~g~~~C~C~~G~~G~~--C~~~~~~~~~--------------~~~c~~~~~C~~~~--C   60 (143)
T 4d90_A            2 ICDP-NPCENGGICL--PGLADGSFSCECPDGFTDPN--CSSVVEVASD--------------EEEPTSAGPCTPNP--C   60 (143)
T ss_dssp             -CCS-CCCGGGCEEE--C-----CCEEECCTTCCTTT--TCSCCCCTTT--------------TTSCCCCCTTSSCC--C
T ss_pred             cCCC-CcCCCCCEee--CCCCCCCEEeECCCCCCCCC--CccCcccccc--------------ccccccCCcCCCCC--C
Confidence            4776 8999999997  554  689999999998764  4444444322              23667889997654  9


Q ss_pred             CCCCeee-------eCCCCeeEeecCCCCccCCCccc-cCCCCC------CCeeeecCCcEEEEcCCCCCCCCCCCc
Q psy5752         136 GKDASCV-------VASQGHFHCECNEGFTGNGITCK-PVRKKE------SDFLLVNQGMFMLRVPYQPTRTDRGRP  198 (222)
Q Consensus       136 ~~~~~C~-------n~~~g~~~C~C~~G~~gd~~~C~-~~~~~~------~~~~~~~~g~~~~~~~~~~~~~~~~~~  198 (222)
                      .++++|+       ++. ++|+|.|++||.|  ..|+ ++++|.      ...|+++.++|.|.|+.++.+......
T Consensus        61 ~~~g~C~~~~~~~~~~~-~~~~C~C~~G~~G--~~C~~~i~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~c~~~  134 (143)
T 4d90_A           61 HNGGTCEISEAYRGDTF-IGYVCKCPRGFNG--IHCQHNINECEVEPCKNGGICTDLVANYSCECPGEFMGRNCQYK  134 (143)
T ss_dssp             CTTCEEEECCCEETTEE-CCEEEECCTTEES--TTSCEECCTTTTCCSCTTCEEEEETTEEEEECCTTCBSTTSCBC
T ss_pred             CCCCEecCCCccccCCC-CCeEeECcCCCcC--CCcccCCCcCCCCCCCCCCEeECCCCCeEeECCCCCccCCceec
Confidence            9999999       554 4599999999987  7786 777663      357899999999999988887555444

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A

Probab=99.45  E-value=1.1e-13  Score=102.51  Aligned_cols=108  Identities=19%  Similarity=0.405  Sum_probs=81.4

Q ss_pred             CCCCCCCEeeecCCCCCeEEecCCCCccCCCeeecCCCcCCCCCCCCCCCCCcccCCCccccCCCCCCCC-CCCCCCCee
Q psy5752          63 KNCHANAECVYNATSAGYRCQCAQGYVGNGVECHPLKSCLEDRSLCGKDSQGYVGNGVECHPLKSCLEDR-SLCGKDASC  141 (222)
Q Consensus        63 ~~C~~~~~C~~~n~~g~~~C~C~~G~~~~~~~C~~~~~C~~~~~~C~~c~~g~~~~g~~C~~id~C~~~~-~~C~~~~~C  141 (222)
                      ++|.++++|+  +.   |+|.|++||+|....                    +..++..|++||+|+... +.|.++++|
T Consensus         7 ~~C~~~~~C~--~~---~~C~C~~G~~g~~~~--------------------~~~~~~~C~dideC~~~~~~~C~~~~~C   61 (143)
T 2bou_A            7 RWCPQDSSCV--NA---TACRCNPGFSSFSEI--------------------ITTPMETCDDINECATLSKVSCGKFSDC   61 (143)
T ss_dssp             TTCCTTEEES--SS---SCEEECTTEECSSSS--------------------BCSTTCCCEECCGGGC----CCCTTEEE
T ss_pred             CcCCCCCEEc--CC---CEEeCCCCCcCcccc--------------------ccCCCCcCCccccccCCCCCCCCCCCEE
Confidence            6898999996  53   899999999986310                    001244788899997642 369888999


Q ss_pred             eeCCCCeeEeecCCCCccC----------CCccccCCCCC--------CCeeeecCCcEEEEcCCCCCCCCCC
Q psy5752         142 VVASQGHFHCECNEGFTGN----------GITCKPVRKKE--------SDFLLVNQGMFMLRVPYQPTRTDRG  196 (222)
Q Consensus       142 ~n~~~g~~~C~C~~G~~gd----------~~~C~~~~~~~--------~~~~~~~~g~~~~~~~~~~~~~~~~  196 (222)
                      +++.+ +|+|.|++||+++          +..|+++++|.        ...|+++.|+|.|.|+.++.+....
T Consensus        62 ~n~~g-~y~C~C~~Gy~g~~~~~~~~~~~~~~C~dideC~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~  133 (143)
T 2bou_A           62 WNTEG-SYDCVCSPGYEPVSGAKTFKNESENTCQDVDECSSGQHQCDSSTVCFNTVGSYSCRCRPGWKPRHGI  133 (143)
T ss_dssp             EECSS-CEEEEECTTEEETTCCSCBSSGGGCCEEECCHHHHTCCCCCTTSEEEECSSCEEEECCSSSCBCTTC
T ss_pred             EcCCC-CeEeECCCCcccCcCccccccCCCCCcCCccCccCcCCCCCCCCEEECCCCCEEeeCCCCcccCCCC
Confidence            99974 5999999999975          34788876653        3679999999999999888765443

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*

Probab=99.45  E-value=4.1e-14  Score=105.11  Aligned_cols=83  Identities=23%  Similarity=0.656  Sum_probs=60.8

Q ss_pred             CCCCccCCCCC-CCCCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCcccCCCCCCC-CCCCCCCCEe-eecCCCCC
Q psy5752           3 KVPIRFSLSEC-DTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPESLGCNV-VKNCHANAEC-VYNATSAG   79 (222)
Q Consensus         3 ~~~~~~~~~~C-~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~~~~~C~~-~~~C~~~~~C-~~~n~~g~   79 (222)
                      .|.+|.|+|+| ++||.++++|++.     .++| .|.|++||+|.   .|++++ +|.. ..+|.+  .| +  ++.++
T Consensus        41 ~~~~c~dideC~~~pC~n~g~C~~~-----~~~y-~C~C~~G~~G~---~C~~~d-eC~~~~~~C~~--~C~~--n~~g~  106 (146)
T 1x7a_L           41 FWKQYVDGDQCEPNPCLNGGLCKDD-----INSY-ECWCQVGFEGK---NCELDA-TCNIKNGRCKQ--FCKT--GADSK  106 (146)
T ss_dssp             ---------CCSSCSSCTTCEEEEC-----SSCE-EEECCSSEEST---TTCEEC-CTTSGGGSCSS--BCCC--CSSSC
T ss_pred             hhccCCCcCcCCCCCCCCCCEeECC-----CCCE-EEecCCCCcCC---cCCCCc-cccCCCCCCcC--CCCC--CCCCC
Confidence            37889999999 9999999999994     5676 99999999998   999886 5986 356754  89 6  89999


Q ss_pred             eEEecCCCCc--cCCCeeecCC
Q psy5752          80 YRCQCAQGYV--GNGVECHPLK   99 (222)
Q Consensus        80 ~~C~C~~G~~--~~~~~C~~~~   99 (222)
                      |+|.|++||+  +++..|++++
T Consensus       107 y~C~C~~Gy~l~~dG~~C~~~~  128 (146)
T 1x7a_L          107 VLCSCTTGYRLAPDQKSCKPAV  128 (146)
T ss_dssp             CCCBCCTTEEECTTSSSEEECS
T ss_pred             EEeEcCCCcEeCCCCCcCCCCC
Confidence            9999999998  4455555544

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A

Probab=99.45  E-value=8.7e-14  Score=93.22  Aligned_cols=75  Identities=28%  Similarity=0.749  Sum_probs=61.9

Q ss_pred             CccCCCCC-C-CCCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCcccCCCCCCCCCCCCCCCEeeecCCCCCeEEe
Q psy5752           6 IRFSLSEC-D-TPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPESLGCNVVKNCHANAECVYNATSAGYRCQ   83 (222)
Q Consensus         6 ~~~~~~~C-~-~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~~~~~C~~~~~C~~~~~C~~~n~~g~~~C~   83 (222)
                      +|.|+|+| . ++|.+ ++|++.     .++| .|.|++||++++. .|+++++ |....+|.+ ++|+  |+.++|+|.
T Consensus         1 sC~dideC~~~~~C~~-g~C~n~-----~g~y-~C~C~~Gy~~~g~-~C~dide-C~~~~~C~~-~~C~--n~~g~y~C~   68 (82)
T 1emn_A            1 SAVDMDECKEPDVCKH-GQCINT-----DGSY-RCECPFGYILAGN-ECVDTDE-CSVGNPCGN-GTCK--NVIGGFECT   68 (82)
T ss_dssp             CCCCCCSSSSTTSCSS-SEECCC-----SSCC-CEECCTTEEEETT-EEEECCG-GGTCCTTSS-SCEE--ECSSSEEEC
T ss_pred             CCCccccCCCCCCcCC-CEEEec-----CCCE-EEECCCCeECCCC-ccCCccc-ccCCCCCCC-CEeE--CCCCCEEeE
Confidence            47899999 4 89975 899994     6777 9999999985444 9988875 974388975 6997  999999999


Q ss_pred             cCCCCccCC
Q psy5752          84 CAQGYVGNG   92 (222)
Q Consensus        84 C~~G~~~~~   92 (222)
                      |++||+++.
T Consensus        69 C~~G~~g~~   77 (82)
T 1emn_A           69 CEEGFEPGP   77 (82)
T ss_dssp             CSSSSCCCS
T ss_pred             CCCCeEeCC
Confidence            999998764

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*

Probab=99.42  E-value=3.7e-13  Score=120.71  Aligned_cols=104  Identities=25%  Similarity=0.598  Sum_probs=84.5

Q ss_pred             CCCCCCCCCCCCEeeecCCCC-CeEE-ecCCCCccCCCeeecCCCcCCCCCCCCCCCCCcccCCCccccCCCCCCCCCCC
Q psy5752          58 GCNVVKNCHANAECVYNATSA-GYRC-QCAQGYVGNGVECHPLKSCLEDRSLCGKDSQGYVGNGVECHPLKSCLEDRSLC  135 (222)
Q Consensus        58 ~C~~~~~C~~~~~C~~~n~~g-~~~C-~C~~G~~~~~~~C~~~~~C~~~~~~C~~c~~g~~~~g~~C~~id~C~~~~~~C  135 (222)
                      +|.. ++|.++++|+  ++.+ +|+| .|++||+|++.                           .|++|++|...++.|
T Consensus         5 eC~~-nPC~~gg~C~--n~~~Gsy~C~~C~~GytGdg~---------------------------~CeDiDEC~~~p~~C   54 (634)
T 1yo8_A            5 GCLS-NPCFPGAQCS--SFPDGSWSCGFCPVGFLGNGT---------------------------HCEDLDECALVPDIC   54 (634)
T ss_dssp             GGGG-CCSCTTCCEE--ECTTSCEEECCCCTTBCSCSS---------------------------SCCBCCTTTTSCCCS
T ss_pred             ccCC-CCCCCCCEEe--cCCCCCeECCcCCCccCCCCC---------------------------CccccccccCCCCcc
Confidence            5876 8999999997  6664 5999 99999998755                           666778887777779


Q ss_pred             CCCC---eeeeCCCCeeEee-cCCCCccCCC-------------ccccCCCCCC--------CeeeecC----CcEEEEc
Q psy5752         136 GKDA---SCVVASQGHFHCE-CNEGFTGNGI-------------TCKPVRKKES--------DFLLVNQ----GMFMLRV  186 (222)
Q Consensus       136 ~~~~---~C~n~~~g~~~C~-C~~G~~gd~~-------------~C~~~~~~~~--------~~~~~~~----g~~~~~~  186 (222)
                      .+++   +|+++.+ +|+|. |++||+|+..             .|+++++|..        ..|+++.    ++|.|.|
T Consensus        55 ~~gg~~~~CvNt~g-sY~C~~C~~Gy~G~~c~g~g~~~~~~dg~~C~dideC~~~~~pC~~~~~Cvnt~~~~~GsY~C~C  133 (634)
T 1yo8_A           55 FSTSKVPRCVNTQP-GFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEPENPCKDKTHNCHKHAECIYLGHFSDPMYKCEC  133 (634)
T ss_dssp             CCCSSSCCEEECSS-SEEECCCCTTEEECCCEESSSHHHHSCCCCEEECCTTTTTCCCCCTTEEEEECCTTCSSSEEEEE
T ss_pred             cCCccccceeeccC-ceecccCCCCcccCccccccccccccCCCcccccccccCCCcccccCccccccccccccceeeec
Confidence            8888   8999975 49998 9999997543             4888887753        3588888    9999999


Q ss_pred             CCCCCC
Q psy5752         187 PYQPTR  192 (222)
Q Consensus       187 ~~~~~~  192 (222)
                      +.++.+
T Consensus       134 ~~Gy~G  139 (634)
T 1yo8_A          134 QTGYAG  139 (634)
T ss_dssp             CTTEEE
T ss_pred             cCCccc
Confidence            987763

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A

Probab=99.42  E-value=3.2e-13  Score=90.42  Aligned_cols=77  Identities=31%  Similarity=0.773  Sum_probs=59.6

Q ss_pred             CcccCCCCCCCCCCCCCCCEeeecCCCCCeEEecCCCCccCCCeeecCCCcCCCCCCCCCCCCCcccCCCccccCCCCCC
Q psy5752          51 ECNPESLGCNVVKNCHANAECVYNATSAGYRCQCAQGYVGNGVECHPLKSCLEDRSLCGKDSQGYVGNGVECHPLKSCLE  130 (222)
Q Consensus        51 ~C~~~~~~C~~~~~C~~~~~C~~~n~~g~~~C~C~~G~~~~~~~C~~~~~C~~~~~~C~~c~~g~~~~g~~C~~id~C~~  130 (222)
                      +|+++++ |....+|.+ +.|+  ++.++|+|.|++||++++.                           .|++||+|..
T Consensus         1 sC~dide-C~~~~~C~~-g~C~--n~~g~y~C~C~~Gy~~~g~---------------------------~C~dideC~~   49 (82)
T 1emn_A            1 SAVDMDE-CKEPDVCKH-GQCI--NTDGSYRCECPFGYILAGN---------------------------ECVDTDECSV   49 (82)
T ss_dssp             CCCCCCS-SSSTTSCSS-SEEC--CCSSCCCEECCTTEEEETT---------------------------EEEECCGGGT
T ss_pred             CCCcccc-CCCCCCcCC-CEEE--ecCCCEEEECCCCeECCCC---------------------------ccCCcccccC
Confidence            3666764 875478975 8996  9999999999999987544                           5666777763


Q ss_pred             CCCCCCCCCeeeeCCCCeeEeecCCCCccCC
Q psy5752         131 DRSLCGKDASCVVASQGHFHCECNEGFTGNG  161 (222)
Q Consensus       131 ~~~~C~~~~~C~n~~~g~~~C~C~~G~~gd~  161 (222)
                       .+.|.+ ++|+|+. |+|+|.|++||+++.
T Consensus        50 -~~~C~~-~~C~n~~-g~y~C~C~~G~~g~~   77 (82)
T 1emn_A           50 -GNPCGN-GTCKNVI-GGFECTCEEGFEPGP   77 (82)
T ss_dssp             -CCTTSS-SCEEECS-SSEEECCSSSSCCCS
T ss_pred             -CCCCCC-CEeECCC-CCEEeECCCCeEeCC
Confidence             345875 6999997 559999999999854

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1

Probab=99.39  E-value=2.5e-13  Score=91.79  Aligned_cols=73  Identities=27%  Similarity=0.734  Sum_probs=57.7

Q ss_pred             CCCC-CCCCCCCCEeeecCCCCCeEEecCCCCccCCCeeecCCCcCCCCCCCCCCCCCcccCCCccccCCCCCCCCCCCC
Q psy5752          58 GCNV-VKNCHANAECVYNATSAGYRCQCAQGYVGNGVECHPLKSCLEDRSLCGKDSQGYVGNGVECHPLKSCLEDRSLCG  136 (222)
Q Consensus        58 ~C~~-~~~C~~~~~C~~~n~~g~~~C~C~~G~~~~~~~C~~~~~C~~~~~~C~~c~~g~~~~g~~C~~id~C~~~~~~C~  136 (222)
                      +|+. +++|.+ ++|+  ++.++|+|.|++||++...                        ++..|++||+|...+..|.
T Consensus         5 eC~~~~~~C~~-g~C~--n~~g~y~C~C~~Gy~~~~~------------------------~g~~C~dideC~~~~~~C~   57 (86)
T 1lmj_A            5 ECRISPDLCGR-GQCV--NTPGDFECKCDEGYESGFM------------------------MMKNCMDIDECQRDPLLCR   57 (86)
T ss_dssp             TTTTCSSTTTT-SCEE--EETTEEEECCCSSEEECTT------------------------TSSSEEECCHHHHCSSTTT
T ss_pred             cccCCCCCCCC-CEEE--CCCCCEEeeCCCCcCccCC------------------------CCCccCCcccccCCCCcCC
Confidence            5876 355964 5897  8999999999999986421                        1337888889987777786


Q ss_pred             CCCeeeeCCCCeeEeecCCCCcc
Q psy5752         137 KDASCVVASQGHFHCECNEGFTG  159 (222)
Q Consensus       137 ~~~~C~n~~~g~~~C~C~~G~~g  159 (222)
                       +++|+|+. |+|+|.|++||++
T Consensus        58 -~~~C~n~~-g~y~C~C~~G~~~   78 (86)
T 1lmj_A           58 -GGVCHNTE-GSYRCECPPGHQL   78 (86)
T ss_dssp             -TSEEEEET-TEEEEESCTTSCC
T ss_pred             -CCEeEcCC-CCEEEECcCCccc
Confidence             57999997 6699999999996

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...

Probab=99.38  E-value=1.7e-13  Score=101.39  Aligned_cols=85  Identities=20%  Similarity=0.530  Sum_probs=64.8

Q ss_pred             CCCccCCCCC-CCCCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCcccCCCCCCCCCCCCCCC---EeeecCCCC-
Q psy5752           4 VPIRFSLSEC-DTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPESLGCNVVKNCHANA---ECVYNATSA-   78 (222)
Q Consensus         4 ~~~~~~~~~C-~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~~~~~C~~~~~C~~~~---~C~~~n~~g-   78 (222)
                      |..+.|+|+| ++||.++++|++  .   .++| .|.|++||+|.   .|++...+|.. .++.+++   .|+  ++.+ 
T Consensus        41 ~~~c~did~C~~~pC~n~g~C~~--~---~g~y-~C~C~~G~~G~---~C~~~~~~c~~-c~~~~~~C~~~C~--~~~g~  108 (142)
T 2c4f_L           41 WISYSDGDQCASSPCQNGGSCKD--Q---LQSY-ICFCLPAFEGR---NCETHKDDQLI-CVNENGGCEQYCS--DHTGT  108 (142)
T ss_dssp             HHHHTTCCGGGGCCCCTTCEEEE--E---TTEE-EEECCTTEEST---TSCEEGGGCCS-TTTGGGGCSSEEE--CCTTS
T ss_pred             cccCCccCcCcCCCcCCCCEEeC--C---CCCE-EeeCCCCccCC---ccccCcccccc-ccCCCCCccCEeE--CCCCC
Confidence            4567899999 899999999999  3   6676 99999999998   99873223533 2333333   897  8888 


Q ss_pred             CeEEecCCCCc--cCCCeeecCCC
Q psy5752          79 GYRCQCAQGYV--GNGVECHPLKS  100 (222)
Q Consensus        79 ~~~C~C~~G~~--~~~~~C~~~~~  100 (222)
                      +|+|.|++||.  +++..|+++++
T Consensus       109 ~y~C~C~~Gy~l~~dG~~C~~~~e  132 (142)
T 2c4f_L          109 KRSCRCHEGYSLLADGVSCTPTVE  132 (142)
T ss_dssp             CCEEECCTTEEECTTSSCEEESSS
T ss_pred             CEEEECCCCceECCCCCCCCCCCc
Confidence            99999999998  44566665544

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*

Probab=99.36  E-value=8.8e-13  Score=93.85  Aligned_cols=73  Identities=26%  Similarity=0.610  Sum_probs=55.2

Q ss_pred             CccCCCCC-CCC--------CCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCcccCCC--CCCC-CCCCCCCCEeee
Q psy5752           6 IRFSLSEC-DTP--------CHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPESL--GCNV-VKNCHANAECVY   73 (222)
Q Consensus         6 ~~~~~~~C-~~~--------C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~~~~--~C~~-~~~C~~~~~C~~   73 (222)
                      .++|+|+| .+|        |.++++|++.     .++| .|.|++||+|.   .|+++++  +|.. ...|..  +|+ 
T Consensus         2 ~~~d~d~C~~~p~~~~C~~~C~~~g~C~~~-----~~~y-~C~C~~G~~G~---~C~~~~~~~~C~~~~~~C~~--~C~-   69 (114)
T 1aut_L            2 KHVDGDQCLVLPLEHPCASLCCGHGTCIDG-----IGSF-SCDCRSGWEGR---FCQREVSFLNCSLDNGGCTH--YCL-   69 (114)
T ss_dssp             ------CCCCCSSCCSSSSTTTTSEEECCC-----SSCC-CEEECTTEEST---TSCEECCSSSSSSGGGGCSS--EEE-
T ss_pred             cceecccccCCCccccccccCCCcCCCCCC-----CCCc-EeeCCCCCcCC---CcCcCCcCCcCcCCCCCCCC--EeE-
Confidence            46789999 788        9999999994     6677 99999999999   8987643  5874 345643  897 


Q ss_pred             cCCCCCeEEecCCCCccC
Q psy5752          74 NATSAGYRCQCAQGYVGN   91 (222)
Q Consensus        74 ~n~~g~~~C~C~~G~~~~   91 (222)
                       ++.++|+|.|.+||++.
T Consensus        70 -n~~g~y~C~C~~G~~~~   86 (114)
T 1aut_L           70 -EEVGWRRCSCAPGYKLG   86 (114)
T ss_dssp             -ECSSSEEEECCTTEEEC
T ss_pred             -CCCCCEEeECCCCeeEC
Confidence             89999999999999954

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*

Probab=99.36  E-value=4.7e-13  Score=99.37  Aligned_cols=84  Identities=23%  Similarity=0.590  Sum_probs=64.9

Q ss_pred             CcccCCCCCCCCCCCCCCCEeeecCCCCCeEEecCCCCccCCCeeecCCCcCCCCCCCCCCCCCcccCCCccccCCCCCC
Q psy5752          51 ECNPESLGCNVVKNCHANAECVYNATSAGYRCQCAQGYVGNGVECHPLKSCLEDRSLCGKDSQGYVGNGVECHPLKSCLE  130 (222)
Q Consensus        51 ~C~~~~~~C~~~~~C~~~~~C~~~n~~g~~~C~C~~G~~~~~~~C~~~~~C~~~~~~C~~c~~g~~~~g~~C~~id~C~~  130 (222)
                      .|.++++ |.+ ++|.++++|+  +..++|.|.|++||+|.                             .|+++|+|..
T Consensus        44 ~c~dide-C~~-~pC~n~g~C~--~~~~~y~C~C~~G~~G~-----------------------------~C~~~deC~~   90 (146)
T 1x7a_L           44 QYVDGDQ-CEP-NPCLNGGLCK--DDINSYECWCQVGFEGK-----------------------------NCELDATCNI   90 (146)
T ss_dssp             ------C-CSS-CSSCTTCEEE--ECSSCEEEECCSSEEST-----------------------------TTCEECCTTS
T ss_pred             cCCCcCc-CCC-CCCCCCCEeE--CCCCCEEEecCCCCcCC-----------------------------cCCCCccccC
Confidence            6888875 997 9999999997  88999999999999865                             6667788876


Q ss_pred             CCCCCCCCCee-eeCCCCeeEeecCCCCc--cCCCccccCCCC
Q psy5752         131 DRSLCGKDASC-VVASQGHFHCECNEGFT--GNGITCKPVRKK  170 (222)
Q Consensus       131 ~~~~C~~~~~C-~n~~~g~~~C~C~~G~~--gd~~~C~~~~~~  170 (222)
                      .++.|.+  +| +++. |+|+|.|++||+  +|+.+|.++++.
T Consensus        91 ~~~~C~~--~C~~n~~-g~y~C~C~~Gy~l~~dG~~C~~~~~~  130 (146)
T 1x7a_L           91 KNGRCKQ--FCKTGAD-SKVLCSCTTGYRLAPDQKSCKPAVPF  130 (146)
T ss_dssp             GGGSCSS--BCCCCSS-SCCCCBCCTTEEECTTSSSEEECSSS
T ss_pred             CCCCCcC--CCCCCCC-CCEEeEcCCCcEeCCCCCcCCCCCCC
Confidence            6666865  89 8886 559999999999  567889987654

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*

Probab=99.34  E-value=1.8e-13  Score=106.02  Aligned_cols=82  Identities=27%  Similarity=0.650  Sum_probs=27.6

Q ss_pred             CCCCccCCCCC-CCCCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCcccCC-CCCCC-CCCCCCCCEeeecCCCCC
Q psy5752           3 KVPIRFSLSEC-DTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPES-LGCNV-VKNCHANAECVYNATSAG   79 (222)
Q Consensus         3 ~~~~~~~~~~C-~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~~~-~~C~~-~~~C~~~~~C~~~n~~g~   79 (222)
                      .|..|.|+|+| ++||.++|+|++.     .++| .|.|++||+|.   .|++.. ++|.. ..+|.+  .|+  ++.++
T Consensus        35 fw~~c~dideC~~~pC~ngg~C~n~-----~g~y-~C~C~~Gf~G~---~Ce~~i~deC~~~~~~C~~--~C~--n~~gs  101 (195)
T 1nfu_B           35 FWNKYKDGDQCETSPCQNQGKCKDG-----LGEY-TCTCLEGFEGK---NCELFTRKLCSLDNGDCDQ--FCH--EEQNS  101 (195)
T ss_dssp             -------------------------------------------------------CCGGGTGGGGCSS--EEE--EETTE
T ss_pred             ccccCCCCcccCCCCCCCCCEeECC-----CCCe-eEeCCCCceec---cccccccccccCCCCCCCC--EeE--CCCCC
Confidence            47789999999 8999999999993     6677 99999999998   998743 46986 356864  896  88999


Q ss_pred             eEEecCCCCc--cCCCeeec
Q psy5752          80 YRCQCAQGYV--GNGVECHP   97 (222)
Q Consensus        80 ~~C~C~~G~~--~~~~~C~~   97 (222)
                      |.|.|++||+  +++..|++
T Consensus       102 y~C~C~~Gy~l~~dG~~C~~  121 (195)
T 1nfu_B          102 VVCSCARGYTLADNGKACIP  121 (195)
T ss_dssp             EEEECCTTEEECTTSSCEEE
T ss_pred             eEEECCCCceeCCCCCcccc
Confidence            9999999998  44444444

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...

Probab=99.33  E-value=2.5e-13  Score=99.45  Aligned_cols=83  Identities=27%  Similarity=0.637  Sum_probs=28.0

Q ss_pred             CCCCccCCCCC-CCCCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCcccCC-CCCCC-CCCCCCCCEeeecCCCCC
Q psy5752           3 KVPIRFSLSEC-DTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPES-LGCNV-VKNCHANAECVYNATSAG   79 (222)
Q Consensus         3 ~~~~~~~~~~C-~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~~~-~~C~~-~~~C~~~~~C~~~n~~g~   79 (222)
                      .|..|.|+|+| ++||.++++|++.     .++| .|.|++||+|.   .|++.. ++|.. ..+|.+  .|+  ++.++
T Consensus        35 ~~~~c~d~d~C~~~pC~n~g~C~~~-----~~~y-~C~C~~G~~G~---~C~~~i~d~C~~~~~~C~~--~C~--~~~g~  101 (134)
T 2vh0_B           35 FWNKYKDGDQCETSPCQNQGKCKDG-----LGEY-TCTCLEGFEGK---NCELFTRKLCSLDNGDCDQ--FCH--EEQNS  101 (134)
T ss_dssp             -------------------------------------------------------CCGGGTGGGGCSS--EEE--EETTE
T ss_pred             ccccCCCcCcCCCCCCCCcCCcccC-----CCCE-EeeCCCCccCC---ccccCCCCccccCCCCCCC--EeE--CCCCC
Confidence            46789999999 8999999999994     5666 99999999998   998743 46876 356754  897  88999


Q ss_pred             eEEecCCCCc--cCCCeeecC
Q psy5752          80 YRCQCAQGYV--GNGVECHPL   98 (222)
Q Consensus        80 ~~C~C~~G~~--~~~~~C~~~   98 (222)
                      |+|.|++||.  +++..|+++
T Consensus       102 y~C~C~~Gy~l~~~g~~C~~~  122 (134)
T 2vh0_B          102 VVCSCARGYTLADNGKACIPT  122 (134)
T ss_dssp             EEEECCTTEEECTTSSCEEES
T ss_pred             EEEECCCCcEECCCCCccCcC
Confidence            9999999998  445555544

>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*

Probab=99.33  E-value=1.5e-16  Score=128.04  Aligned_cols=134  Identities=9%  Similarity=0.100  Sum_probs=94.5

Q ss_pred             CCCCCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCcccCCC-----------------------------CCCCCC
Q psy5752          13 CDTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPESL-----------------------------GCNVVK   63 (222)
Q Consensus        13 C~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~~~~-----------------------------~C~~~~   63 (222)
                      +..+|.++++|++  .   .++| +|.|++||+|.   .|+..++                             +|.+ .
T Consensus        36 ~~~~c~ngG~C~~--g---~~~y-~C~Cp~Gf~G~---~Ce~ni~ec~~~~~c~s~pC~nggtc~~G~~c~~~~eC~s-~  105 (267)
T 4fbr_A           36 LDIKSDDGGKTLK--G---TMTY-NGEGPIGFRGT---LSSANNYTVENQWGGTSAPWQPGGVWVLGARDKQNIVAVS-I  105 (267)
T ss_dssp             EEEECSSTTSEEE--E---EEEE-TTSCCEEEEEE---ECSTTEEEEEEESSSTTSCEEEEEEEECCCCSSCCEEEEE-E
T ss_pred             CCCCcCCCCeecC--C---CCCe-EEeCCCCcccc---cccccccccccccCcCCCcccCCCeeeccCccccccccCC-C
Confidence            3568999999999  3   6777 99999999987   5543322                             2555 6


Q ss_pred             CCCCCCEeeecCCCCCeEEecCCCCccCCCeeecCCCcCCC----CCCCCCCCCCcccCCCccccCCCCCCCCCCCCCCC
Q psy5752          64 NCHANAECVYNATSAGYRCQCAQGYVGNGVECHPLKSCLED----RSLCGKDSQGYVGNGVECHPLKSCLEDRSLCGKDA  139 (222)
Q Consensus        64 ~C~~~~~C~~~n~~g~~~C~C~~G~~~~~~~C~~~~~C~~~----~~~C~~c~~g~~~~g~~C~~id~C~~~~~~C~~~~  139 (222)
                      +|.++++|+  +...+|+|+|+.||+|.... .++++|...    ...|.++..+|  +|.+|.....|...+  |.+++
T Consensus       106 pC~ngG~C~--~~~~sy~C~C~~Gf~G~~Ce-~~~d~C~n~~~c~s~pC~ngg~c~--~G~~c~~~i~c~~~~--c~ngg  178 (267)
T 4fbr_A          106 KSNDGGKTL--TGTTTYNGEGPIGFKSEVTD-GDTYSVENQWGGSAAPWHSGGVWV--LGTRGKQNVINVDAK--SNDGG  178 (267)
T ss_dssp             ECSSTTSEE--EEEEEETTSCCEEEEEEECC-CCEEEEEEECSSTTSCCEEEEEEE--CCSSTTSCEEEEEEE--CSSTT
T ss_pred             CCCCCCEEe--cCCccEEeeCCCCccccCCC-CCcccccccCCcCCccccCCccee--cccccccccccCCCC--CCCCC
Confidence            788888886  78889999999999987543 345555432    12343333333  344666544555444  98999


Q ss_pred             eeeeCCCCeeEeecCCCCccCCCcccc
Q psy5752         140 SCVVASQGHFHCECNEGFTGNGITCKP  166 (222)
Q Consensus       140 ~C~n~~~g~~~C~C~~G~~gd~~~C~~  166 (222)
                      +|++.. .+|+|.|++||+|  ..|..
T Consensus       179 ~C~dg~-~~y~C~Cp~Gf~G--~~c~~  202 (267)
T 4fbr_A          179 KTLSGT-MTYNGEGPIGFRG--TLTSP  202 (267)
T ss_dssp             SEEEEE-EEETTSCCEEEEE--EEEET
T ss_pred             EeeCCC-CCeEEeCCCCccc--ccccc
Confidence            999986 5699999999998  56654

>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A

Probab=99.30  E-value=2.9e-12  Score=87.44  Aligned_cols=86  Identities=30%  Similarity=0.617  Sum_probs=64.0

Q ss_pred             eeeecCCCCccCCCCCcccCCCCCCCCCCCCCCCEeeecCCCCCeEEecCCCCccCCCeeecCCCcCCCCCCCCCCCCCc
Q psy5752          36 AKCICNFGYTGDGVTECNPESLGCNVVKNCHANAECVYNATSAGYRCQCAQGYVGNGVECHPLKSCLEDRSLCGKDSQGY  115 (222)
Q Consensus        36 ~~C~C~~G~~g~~~~~C~~~~~~C~~~~~C~~~~~C~~~n~~g~~~C~C~~G~~~~~~~C~~~~~C~~~~~~C~~c~~g~  115 (222)
                      |.|.|.+||+|.   .|+ ++ +|.. .+      |+  +..++|+|.|++||+    .|+                   
T Consensus         2 y~C~C~~g~~g~---~c~-~~-~c~~-~p------C~--n~~~~y~C~C~~G~~----~C~-------------------   44 (91)
T 1tpg_A            2 YQVICRDEKTQM---IYQ-QH-QSWL-RP------VL--RSNRVEYCWCNSGRA----QCH-------------------   44 (91)
T ss_dssp             CCCCCBCSSSCC---BCC-SS-CEEE-EE------CS--SSSCEEEEECSSSCC----BCC-------------------
T ss_pred             eeeECCCCCcCC---eEC-CC-cccC-Cc------cc--cCCCCcEeECCCCCc----ccc-------------------
Confidence            389999999998   784 33 3654 44      54  778899999999995    221                   


Q ss_pred             ccCCCccccCCCCCCCCCCCCCCCeeeeCC-CCeeEeecCCCCccCCCccc-cCC
Q psy5752         116 VGNGVECHPLKSCLEDRSLCGKDASCVVAS-QGHFHCECNEGFTGNGITCK-PVR  168 (222)
Q Consensus       116 ~~~g~~C~~id~C~~~~~~C~~~~~C~n~~-~g~~~C~C~~G~~gd~~~C~-~~~  168 (222)
                            ..++++|..++  |.++++|++.. .++|+|.|++||+|  ..|+ +++
T Consensus        45 ------~~~~~~C~~~p--C~ngg~C~~~~~~~~~~C~C~~G~~G--~~Ce~~id   89 (91)
T 1tpg_A           45 ------SVPVKSCSEPR--CFNGGTCQQALYFSDFVCQCPEGFAG--KSCEIDTR   89 (91)
T ss_dssp             ------EECEEECSSCC--SCTTCEEEEESSSSCEEEECCTTCBS--SSCCBCSS
T ss_pred             ------cCcCCcccCCC--CCCCCEeecCCCCCCeEeECCCCCcC--CcCCcCCC
Confidence                  02467787655  99999999875 13499999999998  7786 444

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}

Probab=99.28  E-value=2.2e-12  Score=87.27  Aligned_cols=68  Identities=29%  Similarity=0.739  Sum_probs=54.5

Q ss_pred             cCCCCC-CCC--CCCCCeecCCCCCCCCCCceeeecCCCCccC--CCCCcccCCCCCCCCCCCCCCCEeeecCCCCCeEE
Q psy5752           8 FSLSEC-DTP--CHPNAQCTSPDEFNESREQAKCICNFGYTGD--GVTECNPESLGCNVVKNCHANAECVYNATSAGYRC   82 (222)
Q Consensus         8 ~~~~~C-~~~--C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~--~~~~C~~~~~~C~~~~~C~~~~~C~~~n~~g~~~C   82 (222)
                      .|+|+| ..+  | ++++|++  .   .++| .|.|++||++.  +. .|+++++ |.. .+|.  ++|+  |++++|+|
T Consensus         1 ~dideC~~~~~~C-~~~~C~n--~---~g~y-~C~C~~G~~~~~~g~-~C~dide-C~~-~~C~--~~C~--n~~g~y~C   66 (87)
T 1z6c_A            1 KDVDECSLKPSIC-GTAVCKN--I---PGDF-ECECPEGYRYNLKSK-SCEDIDE-CSE-NMCA--QLCV--NYPGGYTC   66 (87)
T ss_dssp             CCSCSSSSSSSSB-TTSSCCC--B---TTBC-CCSSSTTCEEETTTT-EEECCCH-HHH-SCCS--SEEC--CCSSSCCE
T ss_pred             CccccccCCCCCC-CCCEeEC--C---CCCE-EEECCCCceECCCCC-cCCCcCe-eCC-CCCC--CEEE--ccCCCEEE
Confidence            378999 555  8 7899999  4   6777 99999999943  33 8987774 987 8896  6996  99999999


Q ss_pred             ecC--CCCc
Q psy5752          83 QCA--QGYV   89 (222)
Q Consensus        83 ~C~--~G~~   89 (222)
                      .|+  +||.
T Consensus        67 ~C~g~~G~~   75 (87)
T 1z6c_A           67 YCDGKKGFK   75 (87)
T ss_dssp             ECCSSSCCB
T ss_pred             ECCCCcCCc
Confidence            995  5554

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A

Probab=99.26  E-value=4.4e-12  Score=96.43  Aligned_cols=118  Identities=25%  Similarity=0.673  Sum_probs=80.8

Q ss_pred             CCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCcccCCCCCCCCCCCC-CCCEeeecCCCCCeEEecCCCCccCCCe
Q psy5752          16 PCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPESLGCNVVKNCH-ANAECVYNATSAGYRCQCAQGYVGNGVE   94 (222)
Q Consensus        16 ~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~~~~~C~~~~~C~-~~~~C~~~n~~g~~~C~C~~G~~~~~~~   94 (222)
                      .|..+++|..      .  . .|.|++||+|+   .|+..  +|.  ..|. .++.|+  +   .|+|.|++||.|....
T Consensus        39 ~c~~~g~C~~------~--g-~C~C~~G~~G~---~C~~~--~C~--~~C~~~~g~C~--~---~~~C~C~~G~~G~~C~   97 (169)
T 2vj2_A           39 DFFGHYACDQ------N--G-NKTCMEGWMGP---ECNRA--ICR--QGCSPKHGSCK--L---PGDCRCQYGWQGLYCD   97 (169)
T ss_dssp             ETTEEEEECS------S--C-CEEECTTEEST---TSCEE--CCC--TTCCTTTEECS--S---TTCCEECTTEESSSSC
T ss_pred             CcCCCCEeCC------C--C-eeECCCCCcCC---CCCCC--CCC--CCCCCCCcccC--C---CCeeECCCCCCCCCcc
Confidence            4555677754      1  2 68999999998   88753  276  3565 567784  3   5789999999977542


Q ss_pred             -eecCCCcCCCCCCCC-----CCCCCcccCCCccc-cCCCCCCCCCCCCCCCeeeeCCCCeeEeecCCCCcc
Q psy5752          95 -CHPLKSCLEDRSLCG-----KDSQGYVGNGVECH-PLKSCLEDRSLCGKDASCVVASQGHFHCECNEGFTG  159 (222)
Q Consensus        95 -C~~~~~C~~~~~~C~-----~c~~g~~~~g~~C~-~id~C~~~~~~C~~~~~C~n~~~g~~~C~C~~G~~g  159 (222)
                       |.....|...  .|.     .|.+||++.  .|+ ++++|.. ..+|.++++|+++..++|+|.|++||+|
T Consensus        98 ~C~~~~~C~~g--~C~~~~~C~C~~G~~G~--~C~~~~~~C~~-~~~C~~~g~C~~~~~~~~~C~C~~G~~G  164 (169)
T 2vj2_A           98 KCIPHPGCVHG--ICNEPWQCLCETNWGGQ--LCDKDLNYCGT-HQPCLNGGTCSNTGPDKYQCSCPEGYSG  164 (169)
T ss_dssp             EECCCTTCSSE--ECSSTTCCEECTTEETT--TTCEESCHHHH-TCCCCTTCEEEECSTTCEEEECCTTCCS
T ss_pred             cCCCCCCCCCC--CcCCCCEEeCCCCCCCC--cccCCCCCCCC-CCCCCCCCEEcCCCCCCcEeECCCCCcC
Confidence             2222223311  232     167888865  887 8899974 3459888999986335599999999998

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A

Probab=99.25  E-value=1.3e-12  Score=98.59  Aligned_cols=133  Identities=23%  Similarity=0.425  Sum_probs=80.4

Q ss_pred             cCCCCCCCCCCCCCCCEeeecCCCCCeEEecCCCCccC--CCeeecCCC--cCCCCCCCCC-----CCC--CcccCCCcc
Q psy5752          54 PESLGCNVVKNCHANAECVYNATSAGYRCQCAQGYVGN--GVECHPLKS--CLEDRSLCGK-----DSQ--GYVGNGVEC  122 (222)
Q Consensus        54 ~~~~~C~~~~~C~~~~~C~~~n~~g~~~C~C~~G~~~~--~~~C~~~~~--C~~~~~~C~~-----c~~--g~~~~g~~C  122 (222)
                      +++ ||+...+|. +++|+  |+.++|+|.|++||++.  +..|+++++  |......|..     |..  +....+..|
T Consensus         2 did-eC~~~~~C~-~~~C~--n~~gsy~C~C~~Gy~~~~~g~~C~d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C   77 (162)
T 1uzk_A            2 DVN-ECLDPTTCI-SGNCV--NTPGSYICDCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASC   77 (162)
T ss_dssp             CCC-GGGSTTSSB-TSEEE--EETTEEEEECCTTCEECTTSSBEECCCCEEEEEEC----------CEEEEEEEECHHHH
T ss_pred             ccc-cCCCCCCCC-CCEeE--CCCCCEEEeCCCCCeECCCCCcccCCCCCcccCCCcccCCCCCCcccCCcCCcccCcee
Confidence            344 487447896 68997  99999999999999964  677888776  6543322210     100  000000111


Q ss_pred             ccCCCCCCC---CCCCCCCCeeeeCCCCeeEeecCC--CCccC--CCccccCCCCC-------CCeeeecCCcEEEEcCC
Q psy5752         123 HPLKSCLED---RSLCGKDASCVVASQGHFHCECNE--GFTGN--GITCKPVRKKE-------SDFLLVNQGMFMLRVPY  188 (222)
Q Consensus       123 ~~id~C~~~---~~~C~~~~~C~n~~~g~~~C~C~~--G~~gd--~~~C~~~~~~~-------~~~~~~~~g~~~~~~~~  188 (222)
                      .    |..+   ...|.   .|.+...++|+|.|++  ||+++  +..|+++++|.       ...|+++.|+|.|.|+.
T Consensus        78 ~----C~~G~~~~~~C~---~C~~~~~~~y~C~C~~g~G~~~~~~~~~c~dideC~~~~~~C~~g~C~n~~gsy~C~C~~  150 (162)
T 1uzk_A           78 C----CSLGKAWGTPCE---MCPAVNTSEYKILCPGGEGFRPNPITVILEDIDECQELPGLCQGGKCINTFGSFQCRCPT  150 (162)
T ss_dssp             H----TTTCCEETTTTE---ECCCTTSHHHHHHCTTCTTEEECTTTCCEEECCHHHHCGGGGBTSEEEECSSCEEEECCT
T ss_pred             e----CCCCCCcCCCcc---cCCCCCCCCceeECCCCCCcccCCCCCccCccccccCCCCCcCCCEeEcCCCCEEeeCCC
Confidence            1    1110   11232   2443334558888877  88875  35688887763       24799999999999998


Q ss_pred             CCCCCCCCC
Q psy5752         189 QPTRTDRGR  197 (222)
Q Consensus       189 ~~~~~~~~~  197 (222)
                      ++.+...++
T Consensus       151 Gy~g~~d~~  159 (162)
T 1uzk_A          151 GYYLNEDTR  159 (162)
T ss_dssp             TCCBCTTTC
T ss_pred             CccCCCCCC
Confidence            887654433

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}

Probab=99.21  E-value=3.3e-11  Score=100.67  Aligned_cols=145  Identities=21%  Similarity=0.522  Sum_probs=63.2

Q ss_pred             CCCCCCCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCcccCCCCCCCCCCCCCCCEeeecCCCCCeEEecCCCCcc
Q psy5752          11 SECDTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPESLGCNVVKNCHANAECVYNATSAGYRCQCAQGYVG   90 (222)
Q Consensus        11 ~~C~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~~~~~C~~~~~C~~~~~C~~~n~~g~~~C~C~~G~~~   90 (222)
                      ++|+.+|.++|+|.+        .+ .|.|++||+|+   .|+..  .|.  .+|.+++.|+  +   .+.|.|.+||.|
T Consensus       149 ~~C~~~C~~~G~C~~--------~~-~C~C~~G~~G~---~C~~~--~C~--~~C~~~G~C~--~---~~~C~C~~G~~G  207 (324)
T 2ygq_A          149 AECPGGCRNGGFCNE--------RR-ICECPDGFHGP---HCEKA--LCT--PRCMNGGLCV--T---PGFCICPPGFYG  207 (324)
T ss_dssp             CCCSSCCCSSCEECT--------TS-CEECCTTEESS---SSCEE--SSS--SCCCTTCEEC--S---SCCEECCTTCBT
T ss_pred             CCCCCCCCCCCEECC--------CC-eEECCCCCcCC---CCCCC--CCC--CCCCCCCEEc--C---CCEEeCCCCccC
Confidence            466678999999976        23 89999999998   89864  376  4899999995  3   468999999998


Q ss_pred             CCCeeecCCCcCC---CCCCCCC-----CCCCcccCCCccccCCCCCCCCCCCCCCCeeeeCCCCeeEeecCCCCccCCC
Q psy5752          91 NGVECHPLKSCLE---DRSLCGK-----DSQGYVGNGVECHPLKSCLEDRSLCGKDASCVVASQGHFHCECNEGFTGNGI  162 (222)
Q Consensus        91 ~~~~C~~~~~C~~---~~~~C~~-----c~~g~~~~g~~C~~id~C~~~~~~C~~~~~C~n~~~g~~~C~C~~G~~gd~~  162 (222)
                      ..+.  . +.|..   +.+.|..     |.+||.++  .|+ +++|.   ..|.++++|+.    .++|.|++||+|  .
T Consensus       208 ~~C~--~-~~C~~~C~~~G~C~~~~~C~C~~G~~G~--~C~-~~~C~---~~C~~~g~C~~----~~~C~C~~G~~G--~  272 (324)
T 2ygq_A          208 VNCD--K-ANCSTTCFNGGTCFYPGKCICPPGLEGE--QCE-ISKCP---QPCRNGGKCIG----KSKCKCSKGYQG--D  272 (324)
T ss_dssp             TTTC--B-CCCSSCCCSSCCBSCSSCBCCCTTCCTT--TTC---------------------------------------
T ss_pred             CCcc--c-CcCCCCCCCCCeeCCCCeeeCCCCccCC--CCC-cCcCC---CcCCCCCEECC----CCEEECCCCCcC--C
Confidence            7543  1 22321   1233432     78999876  786 57785   34988899974    278999999998  4


Q ss_pred             ccccCCCC-----CCCeeeecCCcEEEEcCCCCCCCCC
Q psy5752         163 TCKPVRKK-----ESDFLLVNQGMFMLRVPYQPTRTDR  195 (222)
Q Consensus       163 ~C~~~~~~-----~~~~~~~~~g~~~~~~~~~~~~~~~  195 (222)
                      .|+. +.|     ....|.+   .+.|.|+.+..+...
T Consensus       273 ~C~~-~~C~~~C~~~g~C~~---~~~C~C~~G~~G~~C  306 (324)
T 2ygq_A          273 LCSK-PVCEPGCGAHGTCHE---PNKCQCQEGWHGRHC  306 (324)
T ss_dssp             --------------------------------------
T ss_pred             CCcC-CCCCCCCCCCCEECC---CCEeECCCCCcCCCC
Confidence            5652 222     2234443   467888877775544

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}

Probab=99.21  E-value=5.3e-12  Score=85.41  Aligned_cols=77  Identities=29%  Similarity=0.795  Sum_probs=56.5

Q ss_pred             CCCC-CCCCCCCCEeeecCCCCCeEEecCCCCccCCCeeecCCCcCCCCCCCCCCCCCcccCCCccccCCCCCCCCCCCC
Q psy5752          58 GCNV-VKNCHANAECVYNATSAGYRCQCAQGYVGNGVECHPLKSCLEDRSLCGKDSQGYVGNGVECHPLKSCLEDRSLCG  136 (222)
Q Consensus        58 ~C~~-~~~C~~~~~C~~~n~~g~~~C~C~~G~~~~~~~C~~~~~C~~~~~~C~~c~~g~~~~g~~C~~id~C~~~~~~C~  136 (222)
                      +|.. +.+| ++++|+  ++.++|+|.|++||+++..                         ++.|++||+|...  +|.
T Consensus         5 eC~~~~~~C-~~~~C~--n~~g~y~C~C~~G~~~~~~-------------------------g~~C~dideC~~~--~C~   54 (87)
T 1z6c_A            5 ECSLKPSIC-GTAVCK--NIPGDFECECPEGYRYNLK-------------------------SKSCEDIDECSEN--MCA   54 (87)
T ss_dssp             SSSSSSSSB-TTSSCC--CBTTBCCCSSSTTCEEETT-------------------------TTEEECCCHHHHS--CCS
T ss_pred             cccCCCCCC-CCCEeE--CCCCCEEEECCCCceECCC-------------------------CCcCCCcCeeCCC--CCC
Confidence            5877 2338 678996  9999999999999985421                         3377788888654  486


Q ss_pred             CCCeeeeCCCCeeEeecC--CCCc--cCCCccccC
Q psy5752         137 KDASCVVASQGHFHCECN--EGFT--GNGITCKPV  167 (222)
Q Consensus       137 ~~~~C~n~~~g~~~C~C~--~G~~--gd~~~C~~~  167 (222)
                        ++|+|+. |+|+|.|+  +||.  .++..|.+|
T Consensus        55 --~~C~n~~-g~y~C~C~g~~G~~~~~~~~~C~di   86 (87)
T 1z6c_A           55 --QLCVNYP-GGYTCYCDGKKGFKLAQDQKSCEVV   86 (87)
T ss_dssp             --SEECCCS-SSCCEECCSSSCCBCCTTSSSCBCC
T ss_pred             --CEEEccC-CCEEEECCCCcCCcccCCCCcceEC
Confidence              5999997 55999994  6666  244567655

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1

Probab=99.21  E-value=4e-12  Score=85.79  Aligned_cols=72  Identities=26%  Similarity=0.624  Sum_probs=56.9

Q ss_pred             cCCCCC-CC--CCCCCCeecCCCCCCCCCCceeeecCCCCccC---CCCCcccCCCCCCC-CCCCCCCCEeeecCCCCCe
Q psy5752           8 FSLSEC-DT--PCHPNAQCTSPDEFNESREQAKCICNFGYTGD---GVTECNPESLGCNV-VKNCHANAECVYNATSAGY   80 (222)
Q Consensus         8 ~~~~~C-~~--~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~---~~~~C~~~~~~C~~-~~~C~~~~~C~~~n~~g~~   80 (222)
                      .||||| ..  +|.+ ++|++  +   .++| .|.|++||++.   +. .|+++++ |.. +..|. +++|+  |+.++|
T Consensus         1 ~dideC~~~~~~C~~-g~C~n--~---~g~y-~C~C~~Gy~~~~~~g~-~C~dide-C~~~~~~C~-~~~C~--n~~g~y   68 (86)
T 1lmj_A            1 TDIDECRISPDLCGR-GQCVN--T---PGDF-ECKCDEGYESGFMMMK-NCMDIDE-CQRDPLLCR-GGVCH--NTEGSY   68 (86)
T ss_dssp             CCCCTTTTCSSTTTT-SCEEE--E---TTEE-EECCCSSEEECTTTSS-SEEECCH-HHHCSSTTT-TSEEE--EETTEE
T ss_pred             CccccccCCCCCCCC-CEEEC--C---CCCE-EeeCCCCcCccCCCCC-ccCCccc-ccCCCCcCC-CCEeE--cCCCCE
Confidence            379999 44  4965 59999  4   6777 99999999843   33 8998874 986 33475 57997  999999


Q ss_pred             EEecCCCCccC
Q psy5752          81 RCQCAQGYVGN   91 (222)
Q Consensus        81 ~C~C~~G~~~~   91 (222)
                      +|.|++||++.
T Consensus        69 ~C~C~~G~~~~   79 (86)
T 1lmj_A           69 RCECPPGHQLS   79 (86)
T ss_dssp             EEESCTTSCCC
T ss_pred             EEECcCCcccC
Confidence            99999999865

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*

Probab=99.21  E-value=2.3e-11  Score=86.42  Aligned_cols=74  Identities=23%  Similarity=0.640  Sum_probs=56.5

Q ss_pred             CCCCCEeeecCCCCCeEEecCCCCccCCCeeecCCCcCCCCCCCCCCCCCcccCCCccccCCCCCCCCCCCCCCCeeeeC
Q psy5752          65 CHANAECVYNATSAGYRCQCAQGYVGNGVECHPLKSCLEDRSLCGKDSQGYVGNGVECHPLKSCLEDRSLCGKDASCVVA  144 (222)
Q Consensus        65 C~~~~~C~~~n~~g~~~C~C~~G~~~~~~~C~~~~~C~~~~~~C~~c~~g~~~~g~~C~~id~C~~~~~~C~~~~~C~n~  144 (222)
                      |.++++|+  ++.++|+|.|++||+|..+  +++                        .++++|...++.|.+  +|+|+
T Consensus        22 C~~~g~C~--~~~~~y~C~C~~G~~G~~C--~~~------------------------~~~~~C~~~~~~C~~--~C~n~   71 (114)
T 1aut_L           22 CCGHGTCI--DGIGSFSCDCRSGWEGRFC--QRE------------------------VSFLNCSLDNGGCTH--YCLEE   71 (114)
T ss_dssp             TTTSEEEC--CCSSCCCEEECTTEESTTS--CEE------------------------CCSSSSSSGGGGCSS--EEEEC
T ss_pred             CCCcCCCC--CCCCCcEeeCCCCCcCCCc--CcC------------------------CcCCcCcCCCCCCCC--EeECC
Confidence            88999996  8899999999999988743  211                        123567765556764  89999


Q ss_pred             CCCeeEeecCCCCcc--CCCccccCCC
Q psy5752         145 SQGHFHCECNEGFTG--NGITCKPVRK  169 (222)
Q Consensus       145 ~~g~~~C~C~~G~~g--d~~~C~~~~~  169 (222)
                      . ++|+|.|++||++  ++++|+++..
T Consensus        72 ~-g~y~C~C~~G~~~~~~g~~C~~~~~   97 (114)
T 1aut_L           72 V-GWRRCSCAPGYKLGDDLLQCHPAVK   97 (114)
T ss_dssp             S-SSEEEECCTTEEECTTSSCEEECSS
T ss_pred             C-CCEEeECCCCeeECCCCCccCcCcc
Confidence            7 5599999999994  5678887543

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...

Probab=99.19  E-value=4.3e-12  Score=92.82  Aligned_cols=83  Identities=27%  Similarity=0.708  Sum_probs=32.2

Q ss_pred             CcccCCCCCCCCCCCCCCCEeeecCCCCCeEEecCCCCccCCCeeecCCCcCCCCCCCCCCCCCcccCCCcccc-C-CCC
Q psy5752          51 ECNPESLGCNVVKNCHANAECVYNATSAGYRCQCAQGYVGNGVECHPLKSCLEDRSLCGKDSQGYVGNGVECHP-L-KSC  128 (222)
Q Consensus        51 ~C~~~~~~C~~~~~C~~~~~C~~~n~~g~~~C~C~~G~~~~~~~C~~~~~C~~~~~~C~~c~~g~~~~g~~C~~-i-d~C  128 (222)
                      .|.++++ |.+ .+|.++++|+  +..++|+|.|++||+|.                             .|.+ + ++|
T Consensus        38 ~c~d~d~-C~~-~pC~n~g~C~--~~~~~y~C~C~~G~~G~-----------------------------~C~~~i~d~C   84 (134)
T 2vh0_B           38 KYKDGDQ-CET-SPCQNQGKCK--DGLGEYTCTCLEGFEGK-----------------------------NCELFTRKLC   84 (134)
T ss_dssp             ----------------------------------------------------------------------------CCGG
T ss_pred             cCCCcCc-CCC-CCCCCcCCcc--cCCCCEEeeCCCCccCC-----------------------------ccccCCCCcc
Confidence            5777774 987 8999999996  88999999999999865                             4544 5 677


Q ss_pred             CCCCCCCCCCCeeeeCCCCeeEeecCCCCc--cCCCccccCCC
Q psy5752         129 LEDRSLCGKDASCVVASQGHFHCECNEGFT--GNGITCKPVRK  169 (222)
Q Consensus       129 ~~~~~~C~~~~~C~n~~~g~~~C~C~~G~~--gd~~~C~~~~~  169 (222)
                      ...++.|.+  +|+++. ++|+|.|++||+  +++.+|.++..
T Consensus        85 ~~~~~~C~~--~C~~~~-g~y~C~C~~Gy~l~~~g~~C~~~~~  124 (134)
T 2vh0_B           85 SLDNGDCDQ--FCHEEQ-NSVVCSCARGYTLADNGKACIPTGP  124 (134)
T ss_dssp             GTGGGGCSS--EEEEET-TEEEEECCTTEEECTTSSCEEESSS
T ss_pred             ccCCCCCCC--EeECCC-CCEEEECCCCcEECCCCCccCcCCC
Confidence            665566865  899996 669999999999  56688987654

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*

Probab=99.19  E-value=4.3e-12  Score=98.24  Aligned_cols=82  Identities=27%  Similarity=0.719  Sum_probs=32.4

Q ss_pred             CcccCCCCCCCCCCCCCCCEeeecCCCCCeEEecCCCCccCCCeeecCCCcCCCCCCCCCCCCCcccCCCcccc-C-CCC
Q psy5752          51 ECNPESLGCNVVKNCHANAECVYNATSAGYRCQCAQGYVGNGVECHPLKSCLEDRSLCGKDSQGYVGNGVECHP-L-KSC  128 (222)
Q Consensus        51 ~C~~~~~~C~~~~~C~~~~~C~~~n~~g~~~C~C~~G~~~~~~~C~~~~~C~~~~~~C~~c~~g~~~~g~~C~~-i-d~C  128 (222)
                      .|.++++ |.+ ++|.+++.|+  +..++|.|.|++||.|.                             .|.+ + ++|
T Consensus        38 ~c~dide-C~~-~pC~ngg~C~--n~~g~y~C~C~~Gf~G~-----------------------------~Ce~~i~deC   84 (195)
T 1nfu_B           38 KYKDGDQ-CET-SPCQNQGKCK--DGLGEYTCTCLEGFEGK-----------------------------NCELFTRKLC   84 (195)
T ss_dssp             ----------------------------------------------------------------------------CCGG
T ss_pred             cCCCCcc-cCC-CCCCCCCEeE--CCCCCeeEeCCCCceec-----------------------------cccccccccc
Confidence            5777775 997 9999999996  88999999999999865                             4554 5 778


Q ss_pred             CCCCCCCCCCCeeeeCCCCeeEeecCCCCc--cCCCccccCC
Q psy5752         129 LEDRSLCGKDASCVVASQGHFHCECNEGFT--GNGITCKPVR  168 (222)
Q Consensus       129 ~~~~~~C~~~~~C~n~~~g~~~C~C~~G~~--gd~~~C~~~~  168 (222)
                      ...++.|.+  +|+++. |+|+|.|++||+  +++..|.++.
T Consensus        85 ~~~~~~C~~--~C~n~~-gsy~C~C~~Gy~l~~dG~~C~~~~  123 (195)
T 1nfu_B           85 SLDNGDCDQ--FCHEEQ-NSVVCSCARGYTLADNGKACIPTG  123 (195)
T ss_dssp             GTGGGGCSS--EEEEET-TEEEEECCTTEEECTTSSCEEESS
T ss_pred             cCCCCCCCC--EeECCC-CCeEEECCCCceeCCCCCccccCC
Confidence            765666875  899997 669999999999  5678898765

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A

Probab=99.18  E-value=3.9e-12  Score=91.03  Aligned_cols=98  Identities=26%  Similarity=0.526  Sum_probs=72.4

Q ss_pred             CCCCCCCCCCCCEeeecCC-CCCeEEecCCCCccCCCeeecCCCcCCCCCCCCCCCCCcccCCCccccCCCCCCCCCCCC
Q psy5752          58 GCNVVKNCHANAECVYNAT-SAGYRCQCAQGYVGNGVECHPLKSCLEDRSLCGKDSQGYVGNGVECHPLKSCLEDRSLCG  136 (222)
Q Consensus        58 ~C~~~~~C~~~~~C~~~n~-~g~~~C~C~~G~~~~~~~C~~~~~C~~~~~~C~~c~~g~~~~g~~C~~id~C~~~~~~C~  136 (222)
                      +|.. ++|.+  +|+  ++ .++|+|.|++||++...   +++                     .|.+  +|..  +.|.
T Consensus         6 eC~~-~pC~~--~C~--~~~~g~y~C~C~~Gy~g~~~---~~~---------------------~C~~--~C~~--~~C~   52 (118)
T 1dx5_I            6 PCFR-ANCEY--QCQ--PLDQTSYLCVCAEGFAPIPH---EPH---------------------RCQM--FCNQ--TACP   52 (118)
T ss_dssp             GGGG-CCCSS--EEE--ECSSSCEEEECCTTEEEETT---EEE---------------------EEEE--CCCS--SEEE
T ss_pred             cCCC-CCCCC--CCC--CCCCCCEEeECCCCccccCC---CCC---------------------cccc--ccCC--CCCC
Confidence            5876 89973  997  88 89999999999997642   122                     2322  2433  2364


Q ss_pred             CCCeeeeCCCCeeEeecCCCCccC-CCccccCCCCC-----CCeeeecCCcEEEEcCCCCCC
Q psy5752         137 KDASCVVASQGHFHCECNEGFTGN-GITCKPVRKKE-----SDFLLVNQGMFMLRVPYQPTR  192 (222)
Q Consensus       137 ~~~~C~n~~~g~~~C~C~~G~~gd-~~~C~~~~~~~-----~~~~~~~~g~~~~~~~~~~~~  192 (222)
                        ++|++.  ++|+|.|++||+++ +..|+++++|.     ...|+++.|+|.|.|+.++.+
T Consensus        53 --~~C~~~--~~y~C~C~~Gy~~~~g~~C~dideC~~~~~C~~~C~n~~g~y~C~C~~G~~g  110 (118)
T 1dx5_I           53 --ADCDPN--TQASCECPEGYILDDGFICTDIDECENGGFCSGVCHNLPGTFECICGPDSAL  110 (118)
T ss_dssp             --CEECTT--STTCEECCTTEEEETTTEEEECCHHHHCSSCSSEEEECSSSEEEEECSSSSC
T ss_pred             --CcccCC--CCeEeECCCCccCCCCCccccccccCCCCCCcCeEEeCCCCEEEECCCCCcc
Confidence              589884  44999999999954 57888776653     467999999999999987764

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=99.18  E-value=8.5e-11  Score=100.93  Aligned_cols=117  Identities=21%  Similarity=0.486  Sum_probs=82.2

Q ss_pred             CCCCCCCCCCCCEeeecCCCCCeEEecCCCCccCCCeeecCCCcCCCCCCCCCCCCCcccCCCccccCCCCCCCCCCCCC
Q psy5752          58 GCNVVKNCHANAECVYNATSAGYRCQCAQGYVGNGVECHPLKSCLEDRSLCGKDSQGYVGNGVECHPLKSCLEDRSLCGK  137 (222)
Q Consensus        58 ~C~~~~~C~~~~~C~~~n~~g~~~C~C~~G~~~~~~~C~~~~~C~~~~~~C~~c~~g~~~~g~~C~~id~C~~~~~~C~~  137 (222)
                      ||.. .+|...+.|+  +++++|.|.|++||.+..                          ++.|+++|||.. ++.|.+
T Consensus         2 eC~~-~~~~c~~~C~--~~~~~y~C~C~~G~~~~~--------------------------~~~C~dideC~~-~~~C~~   51 (400)
T 3p5b_L            2 ECLD-NNGGCSHVCN--DLKIGYECLCPDGFQLVA--------------------------QRRCEDIDECQD-PDTCSQ   51 (400)
T ss_dssp             CTTT-TGGGCSSEEE--ECSSSEEEECCTTEEECS--------------------------SSCEEECCCCST-TSSCSS
T ss_pred             cccC-CCCCCCCEeE--CCCCCeEEECCCCCCcCC--------------------------CCcccCchhhhc-cCCCCC
Confidence            4766 5555567997  899999999999998521                          237778888873 456865


Q ss_pred             CCeeeeCCCCeeEeecCCCCcc--CCCccccCCCCCCCeeeecCCcEEEEcCCCCCCCCCCCceeecCCceeeeeecC
Q psy5752         138 DASCVVASQGHFHCECNEGFTG--NGITCKPVRKKESDFLLVNQGMFMLRVPYQPTRTDRGRPIINHPNQMLIGLCLS  213 (222)
Q Consensus       138 ~~~C~n~~~g~~~C~C~~G~~g--d~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (222)
                        .|+|+. |+|.|.|.+||.+  ++.+|..+.  ...+.+.+.+..+....+....    ...++.....+++|+++
T Consensus        52 --~C~n~~-g~~~C~C~~g~~~~~~~~~C~~~~--~~~~ll~~~~~~I~~i~l~~~~----~~~~~~~~~~~~~l~~d  120 (400)
T 3p5b_L           52 --LCVNLE-GGYKCQCEEGFQLDPHTKACKAVG--SIAYLFFTNRHEVRKMTLDRSE----YTSLIPNLRNVVALDTE  120 (400)
T ss_dssp             --CCBCCS-SSCBCCCCTTCCCCTTTSSCCCST--TSCEEEEEETTEEEEECTTSCS----CEEEECSCSCEEEEEEE
T ss_pred             --ccCCCc-cceeeeccccccccccccceeecc--ccceeEEeccceeEEEccCCcc----eeEeccccCcceEEeee
Confidence              899997 5599999999995  567788775  3567777777777777655432    22223344455666655

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}

Probab=99.17  E-value=5.7e-11  Score=98.86  Aligned_cols=81  Identities=31%  Similarity=0.787  Sum_probs=66.5

Q ss_pred             cCCCCC-CCCCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCcc-cCCCCCCC--CCCCCCCCEeeecCCCCCeEEe
Q psy5752           8 FSLSEC-DTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECN-PESLGCNV--VKNCHANAECVYNATSAGYRCQ   83 (222)
Q Consensus         8 ~~~~~C-~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~-~~~~~C~~--~~~C~~~~~C~~~n~~g~~~C~   83 (222)
                      +|+|+| ++||.++++|++.     .++| .|.|++||+|.   .|+ +++ +|..  ..+|.+  .|+  |+.++|.|.
T Consensus         3 ~d~~~C~~~pC~~~g~C~~~-----~~~~-~C~C~~g~~g~---~C~~~~~-eC~~~~~~~C~~--~C~--~~~g~~~C~   68 (317)
T 3h5c_B            3 KGGSPCISQPCLHNGSCQDS-----IWGY-TCTCSPGYEGS---NCELAKN-ECHPERTDGCQH--FCL--PGQESYTCS   68 (317)
T ss_dssp             ---CCTTSCCCTTTCCCCCC-----SSSC-CCCCSSSCCSS---SSCCCSS-SCCTTCTTSCSS--EEE--CCSSSCEEE
T ss_pred             ccCCcCCCCCCCCCCEeECC-----CCCe-EEECCCCCcCC---ccccCcc-cCCCCCCCCCcC--ccc--cCCCeeEEe
Confidence            588999 9999999999983     5666 99999999998   998 555 6986  378976  897  999999999


Q ss_pred             cCCCCccC--CCeeecCCCcC
Q psy5752          84 CAQGYVGN--GVECHPLKSCL  102 (222)
Q Consensus        84 C~~G~~~~--~~~C~~~~~C~  102 (222)
                      |.+||.+.  ...|.++++|.
T Consensus        69 C~~g~~~~~~~~~C~~~~~c~   89 (317)
T 3h5c_B           69 CAQGYRLGEDHKQCVPHDQCA   89 (317)
T ss_dssp             CCTTEECCTTSSCCEECSSCC
T ss_pred             ccccccccccccccccccccc
Confidence            99999964  56788888875

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=99.16  E-value=2.2e-10  Score=106.14  Aligned_cols=149  Identities=21%  Similarity=0.484  Sum_probs=93.5

Q ss_pred             CCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCcccCCCCCCC-CCCCCCCCEeeecCCCCCeEEecCCCCcc-CCC
Q psy5752          16 PCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPESLGCNV-VKNCHANAECVYNATSAGYRCQCAQGYVG-NGV   93 (222)
Q Consensus        16 ~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~~~~~C~~-~~~C~~~~~C~~~n~~g~~~C~C~~G~~~-~~~   93 (222)
                      +|.+ +.|++...   .-.. .+.|..|+.+... .|. .+ +|.. ...|  .+.|+  +++++|.|.|++||.+ ++.
T Consensus       280 ~C~~-G~Ci~~~~---~Cd~-~~dC~dgsDe~~~-~C~-~~-~C~~~~~~C--~~~C~--~~~~~y~C~C~~Gy~l~~g~  347 (791)
T 3m0c_C          280 KCHS-GECITLDK---VCNM-ARDCRDWSDEPIK-ECG-TN-ECLDNNGGC--SHVCN--DLKIGYECLCPDGFQLVAQR  347 (791)
T ss_dssp             CCTT-SCCCCSSC---CSCS-SCCSSSSCSCCCT-TBS-CC-STTTGGGGC--SSEEE--ECSBSEEEECCTTCEEETTT
T ss_pred             ccCC-Cccccccc---ccCC-ccccccccCcccc-ccc-cc-cccccccCc--ccccc--CCCCCcccCCCCCCccCCCC
Confidence            5654 57776321   1122 4577777765422 453 22 4664 2345  34896  8999999999999985 333


Q ss_pred             eeecCCCcCCCCCCCCCCCCCcccCCCccccCCCCCCCCCCCCCCCeeeeCCCCeeEeecCCCCcc--CCCccccCCCCC
Q psy5752          94 ECHPLKSCLEDRSLCGKDSQGYVGNGVECHPLKSCLEDRSLCGKDASCVVASQGHFHCECNEGFTG--NGITCKPVRKKE  171 (222)
Q Consensus        94 ~C~~~~~C~~~~~~C~~c~~g~~~~g~~C~~id~C~~~~~~C~~~~~C~n~~~g~~~C~C~~G~~g--d~~~C~~~~~~~  171 (222)
                                                 .|++|+||. .+..|.+  +|+|+. |+|+|.|++||.+  ++++|.++++. 
T Consensus       348 ---------------------------~C~dideC~-~~~~C~~--~C~n~~-gsy~C~C~~Gy~l~~~~~~C~~~~~~-  395 (791)
T 3m0c_C          348 ---------------------------RCEDIDECQ-DPDTCSQ--LCVNLE-GGYKCQCEEGFQLDPHTKACKAVGSI-  395 (791)
T ss_dssp             ---------------------------EEECCCCCS-SSSSCTT--TCCBCS-SCBCCCCCSSEECCSSCCCCEETTSC-
T ss_pred             ---------------------------ccccCcccC-CCCCCCC--eeecCC-CCceeecCCCCEeCCCCceeeecccc-
Confidence                                       677778886 3556854  799997 5599999999995  66889988754 


Q ss_pred             CCeeeecCCcEEEEcCCCCCCCCCCCceeecCCceeeeeecC
Q psy5752         172 SDFLLVNQGMFMLRVPYQPTRTDRGRPIINHPNQMLIGLCLS  213 (222)
Q Consensus       172 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (222)
                       .+++.+....+....+....    ...++.....+++|+++
T Consensus       396 -p~Ll~an~~~Ir~i~l~~~~----~~~l~~~~~~~~gl~~d  432 (791)
T 3m0c_C          396 -AYLFFTNRHEVRKMTLDRSE----YTSLIPNLRNVVALDTE  432 (791)
T ss_dssp             -CEEEEECBSSEEEECTTSCC----CEEEECSCSSEEEEEEE
T ss_pred             -cccccccccceeEeeccCCc----ceeeecCCCceEEEeec
Confidence             45666666666555544321    22223334445555554

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A

Probab=99.15  E-value=1.4e-11  Score=86.48  Aligned_cols=83  Identities=24%  Similarity=0.598  Sum_probs=35.4

Q ss_pred             ecCCCCccCCCCCcccCCCCCCC-CCCCCCCCEeeecCCCCCeEEecCCCCccCCCeeecCCCcCCCCCCCCCCCCCccc
Q psy5752          39 ICNFGYTGDGVTECNPESLGCNV-VKNCHANAECVYNATSAGYRCQCAQGYVGNGVECHPLKSCLEDRSLCGKDSQGYVG  117 (222)
Q Consensus        39 ~C~~G~~g~~~~~C~~~~~~C~~-~~~C~~~~~C~~~n~~g~~~C~C~~G~~~~~~~C~~~~~C~~~~~~C~~c~~g~~~  117 (222)
                      ....||.++   .| +++ +|.. ...|.  +.|+  ++.++|.|.|++||++..                         
T Consensus        17 ~~~~~~~~~---~C-d~n-eC~~~~~~C~--~~C~--n~~g~y~C~C~~Gy~g~~-------------------------   62 (107)
T 2w2n_E           17 TTENLYFQG---AM-GTN-ECLDNNGGCS--YVCN--DLKIGYECLCPDGFQLVA-------------------------   62 (107)
T ss_dssp             ---CCCCSC---CB-SCC-GGGTGGGGCS--SEEE--CCSBSCEEECCTTCEEET-------------------------
T ss_pred             ccCCCcCCC---CC-cCc-cCcCCCCCCC--CEeE--eCCCCeEEECCCCccccC-------------------------
Confidence            345678887   88 344 5876 35674  5897  999999999999998731                         


Q ss_pred             CCCccccCCCCCCCCCCCCCCCeeeeCCCCeeEeecCCCCccC
Q psy5752         118 NGVECHPLKSCLEDRSLCGKDASCVVASQGHFHCECNEGFTGN  160 (222)
Q Consensus       118 ~g~~C~~id~C~~~~~~C~~~~~C~n~~~g~~~C~C~~G~~gd  160 (222)
                       +..|++||+|.. ++.|.  ++|+|+. |+|+|.|++||.++
T Consensus        63 -g~~C~dideC~~-~~~C~--~~C~n~~-gsy~C~C~~Gy~~~  100 (107)
T 2w2n_E           63 -QRRCEDIDECQD-PDTCS--QLCVNLE-GGYKCQCEEGFQLD  100 (107)
T ss_dssp             -TTEEEC------------------------------------
T ss_pred             -CCccccccccCC-CCCcC--CeeecCC-CCEEEECCCCceEC
Confidence             226777888863 35585  5899997 55999999999963

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...

Probab=99.12  E-value=5.2e-11  Score=87.89  Aligned_cols=84  Identities=20%  Similarity=0.641  Sum_probs=62.8

Q ss_pred             CcccCCCCCCCCCCCCCCCEeeecCCCCCeEEecCCCCccCCCeeecCCCcCCCCCCCCCCCCCcccCCCcccc-CCCC-
Q psy5752          51 ECNPESLGCNVVKNCHANAECVYNATSAGYRCQCAQGYVGNGVECHPLKSCLEDRSLCGKDSQGYVGNGVECHP-LKSC-  128 (222)
Q Consensus        51 ~C~~~~~~C~~~~~C~~~~~C~~~n~~g~~~C~C~~G~~~~~~~C~~~~~C~~~~~~C~~c~~g~~~~g~~C~~-id~C-  128 (222)
                      .|.++++ |.+ ++|.++++|+  ++.++|+|.|++||+|..                             |++ +++| 
T Consensus        43 ~c~did~-C~~-~pC~n~g~C~--~~~g~y~C~C~~G~~G~~-----------------------------C~~~~~~c~   89 (142)
T 2c4f_L           43 SYSDGDQ-CAS-SPCQNGGSCK--DQLQSYICFCLPAFEGRN-----------------------------CETHKDDQL   89 (142)
T ss_dssp             HHTTCCG-GGG-CCCCTTCEEE--EETTEEEEECCTTEESTT-----------------------------SCEEGGGCC
T ss_pred             cCCccCc-CcC-CCcCCCCEEe--CCCCCEEeeCCCCccCCc-----------------------------cccCccccc
Confidence            4666664 987 9999999997  889999999999998663                             332 3333 


Q ss_pred             --CCCCCCCCCCCeeeeCCCCeeEeecCCCCc--cCCCccccCCC
Q psy5752         129 --LEDRSLCGKDASCVVASQGHFHCECNEGFT--GNGITCKPVRK  169 (222)
Q Consensus       129 --~~~~~~C~~~~~C~n~~~g~~~C~C~~G~~--gd~~~C~~~~~  169 (222)
                        ...++.|.+  +|+++.+++|+|.|++||+  +|+.+|.++++
T Consensus        90 ~c~~~~~~C~~--~C~~~~g~~y~C~C~~Gy~l~~dG~~C~~~~e  132 (142)
T 2c4f_L           90 ICVNENGGCEQ--YCSDHTGTKRSCRCHEGYSLLADGVSCTPTVE  132 (142)
T ss_dssp             STTTGGGGCSS--EEECCTTSCCEEECCTTEEECTTSSCEEESSS
T ss_pred             cccCCCCCccC--EeECCCCCCEEEECCCCceECCCCCCCCCCCc
Confidence              222334543  8999975259999999999  56788998765

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*

Probab=99.10  E-value=2.3e-10  Score=103.91  Aligned_cols=130  Identities=25%  Similarity=0.634  Sum_probs=95.8

Q ss_pred             CC-CCCCCCCCeecCCCCCCCCCCcee---eecCCCCccCCCCCcccCC--------CCCCC---CCCCCCCCEeeecCC
Q psy5752          12 EC-DTPCHPNAQCTSPDEFNESREQAK---CICNFGYTGDGVTECNPES--------LGCNV---VKNCHANAECVYNAT   76 (222)
Q Consensus        12 ~C-~~~C~~~~~C~~~~~~~~~g~~~~---C~C~~G~~g~~~~~C~~~~--------~~C~~---~~~C~~~~~C~~~n~   76 (222)
                      +| ..||.+++.|.+.     .|.+ .   |.|++||+|.   .|+...        ++|..   ..+|.+++.|+  + 
T Consensus       436 ~C~~~pc~n~~~C~~g-----~G~~-~~G~C~C~~Gy~G~---~Ce~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~--~-  503 (690)
T 3fcs_B          436 ACQAQAEPNSHRCNNG-----NGTF-ECGVCRCGPGWLGS---QCECSEEDYRPSQQDECSPREGQPVCSQRGECL--C-  503 (690)
T ss_dssp             GGGTTCCTTCTTTTTT-----SEEE-ETTEEEECTTCCSS---SSCCSCC------CCCCSSSSSSCGGGGSEEEC--S-
T ss_pred             CCcCCCCCCCCcccCC-----CCeE-eCCceEeCCCccCC---ceeeccCccCCccCCcCCCCCCCCCCCCCCEEE--C-
Confidence            56 7899999999862     5666 7   9999999999   886443        34765   13598899994  3 


Q ss_pred             CCCeEEecC----CCCccCCCeeecCCCcCCC-CCCCCC----------CCCCcccCCCccc---cCCCCCCCC-CCCCC
Q psy5752          77 SAGYRCQCA----QGYVGNGVECHPLKSCLED-RSLCGK----------DSQGYVGNGVECH---PLKSCLEDR-SLCGK  137 (222)
Q Consensus        77 ~g~~~C~C~----~G~~~~~~~C~~~~~C~~~-~~~C~~----------c~~g~~~~g~~C~---~id~C~~~~-~~C~~  137 (222)
                         +.|.|.    +||.|..+++ ++++|... ...|..          |..||.|.  .|+   ++++|.... ..|.+
T Consensus       504 ---g~C~C~~~~~~Gy~G~~Ce~-~~~~C~~~~~~~C~~~G~C~~g~C~C~~Gy~G~--~CeC~~~~~~C~~~~g~~C~~  577 (690)
T 3fcs_B          504 ---GQCVCHSSDFGKITGKYCEC-DDFSCVRYKGEMCSGHGQCSCGDCLCDSDWTGY--YCNCTTRTDTCMSSNGLLCSG  577 (690)
T ss_dssp             ---SSEEECCCSSCCCBSTTSCB-CSSCCCBSSSSBGGGSEEEETTEEEECTTEESS--SSCEECCCTTTBCTTSSBTSS
T ss_pred             ---CeeEeecCCCCCeeCCCcCc-ccCcCcCCCCCCCCCCCEecCCeeECcCCCcCC--CCccCCCCCcccCCCCCCCCC
Confidence               589999    9999987763 56667632 123321          78999877  776   578897532 46999


Q ss_pred             CCeeeeCCCCeeEeec-CCCCccCCCcccc
Q psy5752         138 DASCVVASQGHFHCEC-NEGFTGNGITCKP  166 (222)
Q Consensus       138 ~~~C~n~~~g~~~C~C-~~G~~gd~~~C~~  166 (222)
                      +++|++   +  +|.| .+||.|  ..|+.
T Consensus       578 ~G~C~~---g--~C~C~~~Gy~G--~~Ce~  600 (690)
T 3fcs_B          578 RGKCEC---G--SCVCIQPGSYG--DTCEK  600 (690)
T ss_dssp             SCEEET---T--EEECCSTTCBS--TTSCB
T ss_pred             CCEEeC---C--EEECCCCCccC--CCcCc
Confidence            999974   2  7999 999998  56765

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}

Probab=99.10  E-value=1e-11  Score=92.20  Aligned_cols=123  Identities=15%  Similarity=0.350  Sum_probs=76.5

Q ss_pred             CCCCCCCCCCCCCEeeecCCCCCeEEecCCCCccCC--CeeecCCCcCCCCCCCCCCCCCcccCCCccc-cCCCCCCCC-
Q psy5752          57 LGCNVVKNCHANAECVYNATSAGYRCQCAQGYVGNG--VECHPLKSCLEDRSLCGKDSQGYVGNGVECH-PLKSCLEDR-  132 (222)
Q Consensus        57 ~~C~~~~~C~~~~~C~~~n~~g~~~C~C~~G~~~~~--~~C~~~~~C~~~~~~C~~c~~g~~~~g~~C~-~id~C~~~~-  132 (222)
                      ++|++ ++|.+ ++|+  +++++|+|.|++||+++.  ..|.++...        .|..+|.+  ..|+ ++++|.... 
T Consensus         5 deC~~-~pC~n-g~C~--n~~g~y~C~C~~G~~g~~~~~~C~~~~~~--------~C~~~~~g--~~C~~~~~~c~~~~~   70 (147)
T 2w86_A            5 DECES-SPCIN-GVCK--NSPGSFICECSSESTLDPTKTICIETIKG--------TCWQTVID--GRCEININGATLKSQ   70 (147)
T ss_dssp             CGGGG-CCSBT-SEEE--EETTEEEEECCTTEEECTTSSBEEECCCE--------EEEEEEET--TEEEEEEEEEECHHH
T ss_pred             ccCcC-CCCCC-CEeE--CCCCCEEeECCCCcccCCCCCeecCCCCC--------cccCCCCC--CccccCCCccccCCc
Confidence            35987 89975 6997  899999999999999753  456554321        11122221  1443 234432100 


Q ss_pred             ----CCCCCCCeeeeCCCCeeEeecCCCCcc-CCCccccCCCCC-------CCeeeecCCcEEEEcCCCCCCCCCC
Q psy5752         133 ----SLCGKDASCVVASQGHFHCECNEGFTG-NGITCKPVRKKE-------SDFLLVNQGMFMLRVPYQPTRTDRG  196 (222)
Q Consensus       133 ----~~C~~~~~C~n~~~g~~~C~C~~G~~g-d~~~C~~~~~~~-------~~~~~~~~g~~~~~~~~~~~~~~~~  196 (222)
                          .....+..|..-   .|.|.|++||++ ++..|+++++|.       ...|+++.|+|.|.|+.++.+...+
T Consensus        71 C~~~~g~~~g~~C~~c---~~~C~C~~Gy~~~~g~~C~dideC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~g~~~~  143 (147)
T 2w86_A           71 CCSSLGAAWGSPCTLC---QVDPICGKGYSRIKGTQCEDIDECEVFPGVCKNGLCVNTRGSFKCQCPSGMTLDATG  143 (147)
T ss_dssp             HHTTTCSEETTTTEEC---CCCTTTCTTEEEEETTEEEECCHHHHSTTCSSSSEEEEETTEEEEECCTTCCBCTTS
T ss_pred             cccCcCcccCCCcccC---CCcccCCCccccCCCCccCccccccCCCCCCCCCEEECCCCCEEeeCCCCCccCCCC
Confidence                001011123211   178899999984 458898887652       2479999999999999888764433

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}

Probab=99.09  E-value=8e-11  Score=98.35  Aligned_cols=120  Identities=28%  Similarity=0.766  Sum_probs=49.9

Q ss_pred             CCCCCCCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCcccCCCCCCCCCCCCCCCEeeecCCCCCeEEecCCCCcc
Q psy5752          11 SECDTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPESLGCNVVKNCHANAECVYNATSAGYRCQCAQGYVG   90 (222)
Q Consensus        11 ~~C~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~~~~~C~~~~~C~~~~~C~~~n~~g~~~C~C~~G~~~   90 (222)
                      +.|..+|.++++|++      .  + .|.|++||+|.   .|+...  |.  .+|.+++.|+  +   .++|.|++||.|
T Consensus       181 ~~C~~~C~~~G~C~~------~--~-~C~C~~G~~G~---~C~~~~--C~--~~C~~~G~C~--~---~~~C~C~~G~~G  239 (324)
T 2ygq_A          181 ALCTPRCMNGGLCVT------P--G-FCICPPGFYGV---NCDKAN--CS--TTCFNGGTCF--Y---PGKCICPPGLEG  239 (324)
T ss_dssp             ESSSSCCCTTCEECS------S--C-CEECCTTCBTT---TTCBCC--CS--SCCCSSCCBS--C---SSCBCCCTTCCT
T ss_pred             CCCCCCCCCCCEEcC------C--C-EEeCCCCccCC---CcccCc--CC--CCCCCCCeeC--C---CCeeeCCCCccC
Confidence            346557999999976      1  3 89999999999   897643  75  6899999995  4   368999999998


Q ss_pred             CCCeeecCCCcCC---CCCCCCC-----CCCCcccCCCccccCCCCCCCCCCCCCCCeeeeCCCCeeEeecCCCCccCCC
Q psy5752          91 NGVECHPLKSCLE---DRSLCGK-----DSQGYVGNGVECHPLKSCLEDRSLCGKDASCVVASQGHFHCECNEGFTGNGI  162 (222)
Q Consensus        91 ~~~~C~~~~~C~~---~~~~C~~-----c~~g~~~~g~~C~~id~C~~~~~~C~~~~~C~n~~~g~~~C~C~~G~~gd~~  162 (222)
                      ..++   +++|..   +.+.|..     |.+||.++  .|+ +++|.   ..|.++++|++.    ++|.|.+||+|  .
T Consensus       240 ~~C~---~~~C~~~C~~~g~C~~~~~C~C~~G~~G~--~C~-~~~C~---~~C~~~g~C~~~----~~C~C~~G~~G--~  304 (324)
T 2ygq_A          240 EQCE---ISKCPQPCRNGGKCIGKSKCKCSKGYQGD--LCS-KPVCE---PGCGAHGTCHEP----NKCQCQEGWHG--R  304 (324)
T ss_dssp             TTTC----------------------------------------------------------------------------
T ss_pred             CCCC---cCcCCCcCCCCCEECCCCEEECCCCCcCC--CCc-CCCCC---CCCCCCCEECCC----CEeECCCCCcC--C
Confidence            7653   333431   1123332     78899876  777 56776   349888999862    78999999998  5


Q ss_pred             cccc
Q psy5752         163 TCKP  166 (222)
Q Consensus       163 ~C~~  166 (222)
                      .|+.
T Consensus       305 ~C~~  308 (324)
T 2ygq_A          305 HCNK  308 (324)
T ss_dssp             ----
T ss_pred             CCCC
Confidence            6664

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=99.07  E-value=1.1e-10  Score=99.65  Aligned_cols=118  Identities=22%  Similarity=0.540  Sum_probs=43.2

Q ss_pred             CCCCCCCCCCCCEeeecCCCCCeEEecCCCCccCCCeeecCCCcCCCCCCCCCCCCCcccCCCccccCCCCCCCCCCCCC
Q psy5752          58 GCNVVKNCHANAECVYNATSAGYRCQCAQGYVGNGVECHPLKSCLEDRSLCGKDSQGYVGNGVECHPLKSCLEDRSLCGK  137 (222)
Q Consensus        58 ~C~~~~~C~~~~~C~~~n~~g~~~C~C~~G~~~~~~~C~~~~~C~~~~~~C~~c~~g~~~~g~~C~~id~C~~~~~~C~~  137 (222)
                      +|.. .++...+.|.  +..++|+|.|++||+...                         +++.|++++||. .++.|.+
T Consensus         5 ~C~~-~~~~c~~~C~--~~~g~~~C~C~~G~~l~~-------------------------~~~~C~d~~eC~-~~~~C~~   55 (386)
T 3v65_B            5 NCNV-NNGGCAQKCQ--MIRGAVQCTCHTGYRLTE-------------------------DGRTCQDVNECA-EEGYCSQ   55 (386)
T ss_dssp             ----------------------------------------------------------------------------CCTT
T ss_pred             cccC-CCCCCCCCCc--CCCCCcEeECCCCceECC-------------------------CCCccCccceeC-CcCcccC
Confidence            4876 4433345895  889999999999998431                         133777888886 3456975


Q ss_pred             CCeeeeCCCCeeEeecCCCCc--cCCCccccCCCCCCCeeeecCCcEEEEcCCCCCCCCCCCceeecCCceeeeeecC
Q psy5752         138 DASCVVASQGHFHCECNEGFT--GNGITCKPVRKKESDFLLVNQGMFMLRVPYQPTRTDRGRPIINHPNQMLIGLCLS  213 (222)
Q Consensus       138 ~~~C~n~~~g~~~C~C~~G~~--gd~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (222)
                        .|+|+. |+|+|.|++||.  .|+++|+.+..  ..+.+.+.+..+....+....    ...++.....+++|+++
T Consensus        56 --~C~~~~-g~~~C~C~~g~~l~~d~~~C~~~~~--~~~l~~~~~~~I~~i~~~~~~----~~~~~~~~~~~~gl~~d  124 (386)
T 3v65_B           56 --GCTNSE-GAFQCWCEAGYELRPDRRSCKALGP--EPVLLFANRIDIRQVLPHRSE----YTLLLNNLENAIALDFH  124 (386)
T ss_dssp             --EEC------CCEECCTTEEECTTSSCEEECSS--CCEEEEECBSCEEEECTTSCC----CEEEECSCSCEEEEEEE
T ss_pred             --cCCCCC-CCCeEEECCCceEcCCCCeECCccc--cceeEeecCccceeeccCCCc----EEEEecCCCccEEEEEe
Confidence              599997 559999999999  46788998765  567777777766666554331    12223334445555554

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}

Probab=98.98  E-value=6.7e-10  Score=92.35  Aligned_cols=79  Identities=25%  Similarity=0.726  Sum_probs=64.0

Q ss_pred             CCCCCCCCCCCCEeeecCCCCCeEEecCCCCccCCCeeecCCCcCCCCCCCCCCCCCcccCCCccc-cCCCCCCC-CCCC
Q psy5752          58 GCNVVKNCHANAECVYNATSAGYRCQCAQGYVGNGVECHPLKSCLEDRSLCGKDSQGYVGNGVECH-PLKSCLED-RSLC  135 (222)
Q Consensus        58 ~C~~~~~C~~~~~C~~~n~~g~~~C~C~~G~~~~~~~C~~~~~C~~~~~~C~~c~~g~~~~g~~C~-~id~C~~~-~~~C  135 (222)
                      +|.+ .+|.+++.|+  +..++|.|.|++||.|.                             .|+ ++++|... .+.|
T Consensus         7 ~C~~-~pC~~~g~C~--~~~~~~~C~C~~g~~g~-----------------------------~C~~~~~eC~~~~~~~C   54 (317)
T 3h5c_B            7 PCIS-QPCLHNGSCQ--DSIWGYTCTCSPGYEGS-----------------------------NCELAKNECHPERTDGC   54 (317)
T ss_dssp             CTTS-CCCTTTCCCC--CCSSSCCCCCSSSCCSS-----------------------------SSCCCSSSCCTTCTTSC
T ss_pred             cCCC-CCCCCCCEeE--CCCCCeEEECCCCCcCC-----------------------------ccccCcccCCCCCCCCC
Confidence            5887 8999999996  88899999999999866                             555 77888752 2569


Q ss_pred             CCCCeeeeCCCCeeEeecCCCCcc--CCCccccCCCCC
Q psy5752         136 GKDASCVVASQGHFHCECNEGFTG--NGITCKPVRKKE  171 (222)
Q Consensus       136 ~~~~~C~n~~~g~~~C~C~~G~~g--d~~~C~~~~~~~  171 (222)
                      .+  .|+|+. ++|+|.|++||.+  ++.+|.+++++.
T Consensus        55 ~~--~C~~~~-g~~~C~C~~g~~~~~~~~~C~~~~~c~   89 (317)
T 3h5c_B           55 QH--FCLPGQ-ESYTCSCAQGYRLGEDHKQCVPHDQCA   89 (317)
T ss_dssp             SS--EEECCS-SSCEEECCTTEECCTTSSCCEECSSCC
T ss_pred             cC--ccccCC-CeeEEeccccccccccccccccccccc
Confidence            76  899997 5599999999996  456798877653

>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*

Probab=98.96  E-value=1.3e-12  Score=105.25  Aligned_cols=129  Identities=6%  Similarity=0.063  Sum_probs=84.8

Q ss_pred             CccCCCCC-CCCCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCcccCCCC------CCC-----------------
Q psy5752           6 IRFSLSEC-DTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPESLG------CNV-----------------   61 (222)
Q Consensus         6 ~~~~~~~C-~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~~~~~------C~~-----------------   61 (222)
                      .|.+.++| +.||.++++|++.     ..+| +|.|++||+|.   .|+...++      |.+                 
T Consensus        95 ~c~~~~eC~s~pC~ngG~C~~~-----~~sy-~C~C~~Gf~G~---~Ce~~~d~C~n~~~c~s~pC~ngg~c~~G~~c~~  165 (267)
T 4fbr_A           95 RDKQNIVAVSIKSNDGGKTLTG-----TTTY-NGEGPIGFKSE---VTDGDTYSVENQWGGSAAPWHSGGVWVLGTRGKQ  165 (267)
T ss_dssp             CSSCCEEEEEEECSSTTSEEEE-----EEEE-TTSCCEEEEEE---ECCCCEEEEEEECSSTTSCCEEEEEEECCSSTTS
T ss_pred             ccccccccCCCCCCCCCEEecC-----CccE-EeeCCCCcccc---CCCCCcccccccCCcCCccccCCcceeccccccc
Confidence            34556789 8999999999993     6677 99999999987   55543322      111                 


Q ss_pred             -----CCCCCCCCEeeecCCCCCeEEecCCCCccCCCeee-cCCCcCCCC----CCCCC-------CCCCcccCCCcccc
Q psy5752          62 -----VKNCHANAECVYNATSAGYRCQCAQGYVGNGVECH-PLKSCLEDR----SLCGK-------DSQGYVGNGVECHP  124 (222)
Q Consensus        62 -----~~~C~~~~~C~~~n~~g~~~C~C~~G~~~~~~~C~-~~~~C~~~~----~~C~~-------c~~g~~~~g~~C~~  124 (222)
                           ..+|.++++|+  +..++|+|+|++||+|.  .|+ ++++|....    ..|.+       |..++.        
T Consensus       166 ~i~c~~~~c~ngg~C~--dg~~~y~C~Cp~Gf~G~--~c~~~i~ec~~~~~c~~~~c~~gG~~~~~C~~g~n--------  233 (267)
T 4fbr_A          166 NVINVDAKSNDGGKTL--SGTMTYNGEGPIGFRGT--LTSPDTYTVENQWGGSTAPWNPGGFWMIGARNGQN--------  233 (267)
T ss_dssp             CEEEEEEECSSTTSEE--EEEEEETTSCCEEEEEE--EEETTEEEEEEECSCTTSCCEEEEEEECCCCTTCC--------
T ss_pred             ccccCCCCCCCCCEee--CCCCCeEEeCCCCcccc--ccccccceeccCCCccCCcccCCCeEEEecCCCCc--------
Confidence                 13566777885  77889999999999976  344 455543221    11111       222221        


Q ss_pred             CCCCCCCCCCCCCCCeeeeCCCCeeEeecCCCCcc
Q psy5752         125 LKSCLEDRSLCGKDASCVVASQGHFHCECNEGFTG  159 (222)
Q Consensus       125 id~C~~~~~~C~~~~~C~n~~~g~~~C~C~~G~~g  159 (222)
                      ++.|.   ..|.++++|++.. .+|.|.|++||+|
T Consensus       234 ~~~c~---~~c~ngGtC~dg~-~sy~CeCp~GF~G  264 (267)
T 4fbr_A          234 VVALN---VASSDGGKTLAGT-MIYNGEGPIGFRA  264 (267)
T ss_dssp             EEEEE---EECSSTTSEEEEE-EEETTSCCEEEEE
T ss_pred             cccCC---cCCCCCCEeeCCC-cceeecCCCCccc
Confidence            12222   1377888999875 5599999999987

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=98.91  E-value=5.4e-09  Score=95.79  Aligned_cols=112  Identities=26%  Similarity=0.606  Sum_probs=74.4

Q ss_pred             CCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCcccCCCCCCC-CCCCCCCCEeeecCCCCCeEEecCCCCccCCCe
Q psy5752          16 PCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPESLGCNV-VKNCHANAECVYNATSAGYRCQCAQGYVGNGVE   94 (222)
Q Consensus        16 ~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~~~~~C~~-~~~C~~~~~C~~~n~~g~~~C~C~~G~~~~~~~   94 (222)
                      +|.+ +.|++...   .-.+ .+.|..|+.+... .| +++ +|.. ...|.  +.|+  +++++|+|.|++||.+.   
T Consensus       262 ~C~~-g~Ci~~~~---~Cd~-~~dC~dgsDe~~~-~C-~~~-eC~~~~~~C~--~~C~--~~~~~~~C~C~~G~~~~---  326 (699)
T 1n7d_A          262 KCHS-GECITLDK---VCNM-ARDCRDWSDEPIK-EC-GTN-ECLDNNGGCS--HVCN--DLKIGYECLCPDGFQLV---  326 (699)
T ss_dssp             CCTT-SCCCCSSC---CSCS-SCCSSSSCSCCCS-SC-CCC-CTTSSTTTSC--TTCC--CCTTCCCCCCCSSSCCC---
T ss_pred             ecCC-CcEeCCcc---cccc-cceecCccccccc-cc-ccc-cccccccCcC--CCcc--cCCCCcEEeCCCCeEcC---
Confidence            4543 56766321   1122 4677777665422 45 233 4765 34563  5796  89999999999999862   


Q ss_pred             eecCCCcCCCCCCCCCCCCCcccCCCccccCCCCCCCCCCCCCCCeeeeCCCCeeEeecCCCCcc--CCCccccCCC
Q psy5752          95 CHPLKSCLEDRSLCGKDSQGYVGNGVECHPLKSCLEDRSLCGKDASCVVASQGHFHCECNEGFTG--NGITCKPVRK  169 (222)
Q Consensus        95 C~~~~~C~~~~~~C~~c~~g~~~~g~~C~~id~C~~~~~~C~~~~~C~n~~~g~~~C~C~~G~~g--d~~~C~~~~~  169 (222)
                                             +++.|++|+||+. ++.|.+  +|+|+. |+|+|.|++||.+  ++++|.++..
T Consensus       327 -----------------------~~~~C~dideC~~-~~~C~~--~C~n~~-g~y~C~C~~G~~~~~~~~~C~~~~~  376 (699)
T 1n7d_A          327 -----------------------AQRRCEDIDECQD-PDTCSQ--LCVNLE-GGYKCQCEEGFQLDPHTKACKAVGS  376 (699)
T ss_dssp             -----------------------SSSCCCCCCCCSS-SSSCTT--TCCBCS-SCBCCCCCSSCBCCSSCCCCBCCSS
T ss_pred             -----------------------CCCcccCccccCC-CCcccc--ccccCC-CCeeeeeecccccCCCCCccccccc
Confidence                                   1236778888863 356864  799997 5599999999995  5677887643

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A

Probab=98.91  E-value=3.1e-10  Score=79.57  Aligned_cols=70  Identities=27%  Similarity=0.702  Sum_probs=28.0

Q ss_pred             CCCCC-C--CCCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCcccCCCCCCCCCCCCCCCEeeecCCCCCeEEecC
Q psy5752           9 SLSEC-D--TPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPESLGCNVVKNCHANAECVYNATSAGYRCQCA   85 (222)
Q Consensus         9 ~~~~C-~--~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~~~~~C~~~~~C~~~~~C~~~n~~g~~~C~C~   85 (222)
                      ++||| .  .+|.  ++|++.     .++| .|.|++||+|.+...|++++ +|....+|.  +.|+  |+.++|.|.|+
T Consensus        28 d~neC~~~~~~C~--~~C~n~-----~g~y-~C~C~~Gy~g~~g~~C~did-eC~~~~~C~--~~C~--n~~gsy~C~C~   94 (107)
T 2w2n_E           28 GTNECLDNNGGCS--YVCNDL-----KIGY-ECLCPDGFQLVAQRRCEDID-ECQDPDTCS--QLCV--NLEGGYKCQCE   94 (107)
T ss_dssp             SCCGGGTGGGGCS--SEEECC-----SBSC-EEECCTTCEEETTTEEEC-------------------------------
T ss_pred             cCccCcCCCCCCC--CEeEeC-----CCCe-EEECCCCccccCCCcccccc-ccCCCCCcC--Ceee--cCCCCEEEECC
Confidence            67788 3  3564  489994     6677 99999999983222899777 497447885  6896  99999999999


Q ss_pred             CCCccC
Q psy5752          86 QGYVGN   91 (222)
Q Consensus        86 ~G~~~~   91 (222)
                      +||.++
T Consensus        95 ~Gy~~~  100 (107)
T 2w2n_E           95 EGFQLD  100 (107)
T ss_dssp             ------
T ss_pred             CCceEC
Confidence            999865

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*

Probab=98.82  E-value=8.6e-09  Score=93.69  Aligned_cols=117  Identities=24%  Similarity=0.659  Sum_probs=88.0

Q ss_pred             CCC-C----CCCCCCCeecCCCCCCCCCCceeeecC----CCCccCCCCCcccCCCCCCC--CCCCCCCCEeeecCCCCC
Q psy5752          11 SEC-D----TPCHPNAQCTSPDEFNESREQAKCICN----FGYTGDGVTECNPESLGCNV--VKNCHANAECVYNATSAG   79 (222)
Q Consensus        11 ~~C-~----~~C~~~~~C~~~~~~~~~g~~~~C~C~----~G~~g~~~~~C~~~~~~C~~--~~~C~~~~~C~~~n~~g~   79 (222)
                      ++| .    .+|.++|+|++  .        .|.|+    +||+|.   .|+....+|..  ..+|.+++.|.  +    
T Consensus       484 ~~C~~~~~~~~Cs~~G~C~~--g--------~C~C~~~~~~Gy~G~---~Ce~~~~~C~~~~~~~C~~~G~C~--~----  544 (690)
T 3fcs_B          484 DECSPREGQPVCSQRGECLC--G--------QCVCHSSDFGKITGK---YCECDDFSCVRYKGEMCSGHGQCS--C----  544 (690)
T ss_dssp             CCCSSSSSSCGGGGSEEECS--S--------SEEECCCSSCCCBST---TSCBCSSCCCBSSSSBGGGSEEEE--T----
T ss_pred             CcCCCCCCCCCCCCCCEEEC--C--------eeEeecCCCCCeeCC---CcCcccCcCcCCCCCCCCCCCEec--C----
Confidence            668 3    35999999985  2        79999    999999   89854445875  24798899996  4    


Q ss_pred             eEEecCCCCccCCCeee-cCCCcCCCC-CCCCC----------C-CCCcccCCCccccCCCCCCCCCCCCCCCeeeeCCC
Q psy5752          80 YRCQCAQGYVGNGVECH-PLKSCLEDR-SLCGK----------D-SQGYVGNGVECHPLKSCLEDRSLCGKDASCVVASQ  146 (222)
Q Consensus        80 ~~C~C~~G~~~~~~~C~-~~~~C~~~~-~~C~~----------c-~~g~~~~g~~C~~id~C~~~~~~C~~~~~C~n~~~  146 (222)
                      +.|.|.+||.|..+.|. ++++|.... ..|..          | ..||.|.  .|+.-..|   +..|.+++.|++   
T Consensus       545 g~C~C~~Gy~G~~CeC~~~~~~C~~~~g~~C~~~G~C~~g~C~C~~~Gy~G~--~Ce~C~~C---~~~C~~~g~Cv~---  616 (690)
T 3fcs_B          545 GDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCECGSCVCIQPGSYGD--TCEKCPTC---PDACTFKKECVE---  616 (690)
T ss_dssp             TEEEECTTEESSSSCEECCCTTTBCTTSSBTSSSCEEETTEEECCSTTCBST--TSCBCTTS---CCTTTSCCGGGT---
T ss_pred             CeeECcCCCcCCCCccCCCCCcccCCCCCCCCCCCEEeCCEEECCCCCccCC--CcCcCCCC---CCCCCCCCCccc---
Confidence            79999999999988873 677887532 23432          6 7899877  88753456   345988888874   


Q ss_pred             CeeEeecCCCCccC
Q psy5752         147 GHFHCECNEGFTGN  160 (222)
Q Consensus       147 g~~~C~C~~G~~gd  160 (222)
                            |..||+|.
T Consensus       617 ------C~~g~tG~  624 (690)
T 3fcs_B          617 ------CKKFDRGA  624 (690)
T ss_dssp             ------TTTTCCSS
T ss_pred             ------CCCCCccC
Confidence                  88999984

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*

Probab=98.82  E-value=9.2e-09  Score=88.80  Aligned_cols=114  Identities=28%  Similarity=0.752  Sum_probs=80.5

Q ss_pred             CCCC-C--CCCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCcccC-C---------CCCCCCCCCCCCCEeeecCC
Q psy5752          10 LSEC-D--TPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPE-S---------LGCNVVKNCHANAECVYNAT   76 (222)
Q Consensus        10 ~~~C-~--~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~~-~---------~~C~~~~~C~~~~~C~~~n~   76 (222)
                      .+.| .  .+|.++++|.+.       ++ .|.|++||+|.   .|+.. .         ++|.....|.+++.|.    
T Consensus       195 G~~C~~~C~~C~~~G~C~~~-------~g-~C~C~~G~~G~---~Ce~~C~~g~~g~~C~~~C~~~~~C~~~g~C~----  259 (423)
T 2gy5_A          195 GPECNHLCTACMNNGVCHED-------TG-ECICPPGFMGR---TCEKACELHTFGRTCKERCSGQEGCKSYVFCL----  259 (423)
T ss_dssp             STTSCEECCCCCTTCEECTT-------TC-CEECCTTEEST---TSCEECCTTEESTTSCEECCSTTTTTTCCEEE----
T ss_pred             CCCCCCCCCCCCCCCEEECC-------CC-cEeCCCCccCC---CcccccCCCCCCCCcCccCCCCCCCCCCCEEC----
Confidence            3556 2  389999999872       34 89999999999   88752 1         1243235677778884    


Q ss_pred             CCCeEEecCCCCccCCCeeecCCCcCCCCCCCCCCCCCcccCCCccccCCCCCCCCCCCCCCCeeeeCCCCeeEeecCCC
Q psy5752          77 SAGYRCQCAQGYVGNGVECHPLKSCLEDRSLCGKDSQGYVGNGVECHPLKSCLEDRSLCGKDASCVVASQGHFHCECNEG  156 (222)
Q Consensus        77 ~g~~~C~C~~G~~~~~~~C~~~~~C~~~~~~C~~c~~g~~~~g~~C~~id~C~~~~~~C~~~~~C~n~~~g~~~C~C~~G  156 (222)
                      .++|+|.|++||.|..+  +.            .|.+||.++  .|..  +|     .|.++++|.+..    .|.|++|
T Consensus       260 ~~~~~C~C~~G~~G~~C--~~------------~C~~G~~G~--~C~~--~C-----~C~ngg~C~~~~----~C~C~~G  312 (423)
T 2gy5_A          260 PDPYGCSCATGWKGLQC--NE------------ACHPGFYGP--DCKL--RC-----SCNNGEMCDRFQ----GCLCSPG  312 (423)
T ss_dssp             TTTTEEECCBTCBSGGG--CB------------CCCTTBCSB--TTCC--BC-----CCTTCCEEETTT----EEECCTT
T ss_pred             CCCCeEEeCCCcccccc--cC------------ccCCCCcCC--cccc--cc-----cCCCCCEecCCC----ceECCCC
Confidence            46889999999987643  21            366777765  5653  34     388888998762    3999999


Q ss_pred             CccCCCccccC
Q psy5752         157 FTGNGITCKPV  167 (222)
Q Consensus       157 ~~gd~~~C~~~  167 (222)
                      |+|  ..|+..
T Consensus       313 ~~G--~~Ce~~  321 (423)
T 2gy5_A          313 WQG--LQCERE  321 (423)
T ss_dssp             CBS--TTSCBC
T ss_pred             CcC--CCCccC
Confidence            998  566643

>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A

Probab=98.80  E-value=3.8e-09  Score=71.80  Aligned_cols=65  Identities=23%  Similarity=0.636  Sum_probs=49.4

Q ss_pred             CCCCC-CCCCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCcc-cCCCCCCCCCCCCCCCEeeecCCC--CCeEEec
Q psy5752           9 SLSEC-DTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECN-PESLGCNVVKNCHANAECVYNATS--AGYRCQC   84 (222)
Q Consensus         9 ~~~~C-~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~-~~~~~C~~~~~C~~~~~C~~~n~~--g~~~C~C   84 (222)
                      ++++| ..||.      +  .   .+.| .|.|++||+     .|+ ...++|.+ .+|.++++|+  +..  ++|+|.|
T Consensus        16 ~~~~c~~~pC~------n--~---~~~y-~C~C~~G~~-----~C~~~~~~~C~~-~pC~ngg~C~--~~~~~~~~~C~C   75 (91)
T 1tpg_A           16 QQHQSWLRPVL------R--S---NRVE-YCWCNSGRA-----QCHSVPVKSCSE-PRCFNGGTCQ--QALYFSDFVCQC   75 (91)
T ss_dssp             CSSCEEEEECS------S--S---SCEE-EEECSSSCC-----BCCEECEEECSS-CCSCTTCEEE--EESSSSCEEEEC
T ss_pred             CCCcccCCccc------c--C---CCCc-EeECCCCCc-----ccccCcCCcccC-CCCCCCCEee--cCCCCCCeEeEC
Confidence            57777 66654      3  2   4455 999999996     686 23335998 8999999997  655  8999999


Q ss_pred             CCCCccCCC
Q psy5752          85 AQGYVGNGV   93 (222)
Q Consensus        85 ~~G~~~~~~   93 (222)
                      ++||.|..+
T Consensus        76 ~~G~~G~~C   84 (91)
T 1tpg_A           76 PEGFAGKSC   84 (91)
T ss_dssp             CTTCBSSSC
T ss_pred             CCCCcCCcC
Confidence            999987643

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A

Probab=98.79  E-value=2.7e-09  Score=80.89  Aligned_cols=136  Identities=17%  Similarity=0.385  Sum_probs=85.1

Q ss_pred             CCceeeecCCCCccCCCCCcccCCCCCCCCCCCCCCCEeeecCCCCCeEEecCCCCccCCCeeec-CCCcCCCCCCCC--
Q psy5752          33 REQAKCICNFGYTGDGVTECNPESLGCNVVKNCHANAECVYNATSAGYRCQCAQGYVGNGVECHP-LKSCLEDRSLCG--  109 (222)
Q Consensus        33 g~~~~C~C~~G~~g~~~~~C~~~~~~C~~~~~C~~~~~C~~~n~~g~~~C~C~~G~~~~~~~C~~-~~~C~~~~~~C~--  109 (222)
                      ..+ .|.|++||.|+   .|+.   +|.....|..+++|.   .  ...|+|.+||+|+...-.. ...|...++.|.  
T Consensus        15 ~~~-~c~C~~g~~G~---~C~~---~C~~~~~c~~~g~C~---~--~g~C~C~~G~~G~~C~~~~C~~~C~~~~g~C~~~   82 (169)
T 2vj2_A           15 GRS-AVTCDDYYYGF---GCNK---FCRPRDDFFGHYACD---Q--NGNKTCMEGWMGPECNRAICRQGCSPKHGSCKLP   82 (169)
T ss_dssp             -------CCTTEETT---TTCE---ECCCEEETTEEEEEC---S--SCCEEECTTEESTTSCEECCCTTCCTTTEECSST
T ss_pred             cCe-eeeCCCcCcCC---Cccc---ccCCCCCcCCCCEeC---C--CCeeECCCCCcCCCCCCCCCCCCCCCCCcccCCC
Confidence            444 89999999999   7864   265423576678893   2  4479999999987553100 112321223343  


Q ss_pred             ---CCCCCcccCCCccccCCCCCCCCCCCCCCCeeeeCCCCeeEeecCCCCccCCCccc-cCCC------C-CCCeeeec
Q psy5752         110 ---KDSQGYVGNGVECHPLKSCLEDRSLCGKDASCVVASQGHFHCECNEGFTGNGITCK-PVRK------K-ESDFLLVN  178 (222)
Q Consensus       110 ---~c~~g~~~~g~~C~~id~C~~~~~~C~~~~~C~n~~~g~~~C~C~~G~~gd~~~C~-~~~~------~-~~~~~~~~  178 (222)
                         .|.+||.+.  .|+   +|...+ .|.+ ++|+    ++|+|.|++||+|  ..|+ ++++      | ....|+++
T Consensus        83 ~~C~C~~G~~G~--~C~---~C~~~~-~C~~-g~C~----~~~~C~C~~G~~G--~~C~~~~~~C~~~~~C~~~g~C~~~  149 (169)
T 2vj2_A           83 GDCRCQYGWQGL--YCD---KCIPHP-GCVH-GICN----EPWQCLCETNWGG--QLCDKDLNYCGTHQPCLNGGTCSNT  149 (169)
T ss_dssp             TCCEECTTEESS--SSC---EECCCT-TCSS-EECS----STTCCEECTTEET--TTTCEESCHHHHTCCCCTTCEEEEC
T ss_pred             CeeECCCCCCCC--Ccc---cCCCCC-CCCC-CCcC----CCCEEeCCCCCCC--CcccCCCCCCCCCCCCCCCCEEcCC
Confidence               268889865  664   355432 3764 4887    2389999999998  5666 4433      3 33578886


Q ss_pred             -CCcEEEEcCCCCCCC
Q psy5752         179 -QGMFMLRVPYQPTRT  193 (222)
Q Consensus       179 -~g~~~~~~~~~~~~~  193 (222)
                       .+++.|.|+.++++.
T Consensus       150 ~~~~~~C~C~~G~~G~  165 (169)
T 2vj2_A          150 GPDKYQCSCPEGYSGP  165 (169)
T ss_dssp             STTCEEEECCTTCCST
T ss_pred             CCCCcEeECCCCCcCc
Confidence             899999999887754

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=98.69  E-value=1.1e-08  Score=87.72  Aligned_cols=78  Identities=24%  Similarity=0.613  Sum_probs=59.8

Q ss_pred             CCC-CCCCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCcccCCCCCCCCCCCCCCCEeeecCCCCCeEEecCCCCc
Q psy5752          11 SEC-DTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPESLGCNVVKNCHANAECVYNATSAGYRCQCAQGYV   89 (222)
Q Consensus        11 ~~C-~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~~~~~C~~~~~C~~~~~C~~~n~~g~~~C~C~~G~~   89 (222)
                      ||| ..+|...+.|++.     .++| .|.|++||++...+.|+++++ |....+|..  .|+  |+.++|.|.|.+||.
T Consensus         1 ~eC~~~~~~c~~~C~~~-----~~~y-~C~C~~G~~~~~~~~C~dide-C~~~~~C~~--~C~--n~~g~~~C~C~~g~~   69 (400)
T 3p5b_L            1 NECLDNNGGCSHVCNDL-----KIGY-ECLCPDGFQLVAQRRCEDIDE-CQDPDTCSQ--LCV--NLEGGYKCQCEEGFQ   69 (400)
T ss_dssp             CCTTTTGGGCSSEEEEC-----SSSE-EEECCTTEEECSSSCEEECCC-CSTTSSCSS--CCB--CCSSSCBCCCCTTCC
T ss_pred             CcccCCCCCCCCEeECC-----CCCe-EEECCCCCCcCCCCcccCchh-hhccCCCCC--ccC--CCccceeeecccccc
Confidence            588 6667667799994     6777 999999999422229998885 985578864  896  999999999999998


Q ss_pred             cC--CCeeecCC
Q psy5752          90 GN--GVECHPLK   99 (222)
Q Consensus        90 ~~--~~~C~~~~   99 (222)
                      +.  +..|..++
T Consensus        70 ~~~~~~~C~~~~   81 (400)
T 3p5b_L           70 LDPHTKACKAVG   81 (400)
T ss_dssp             CCTTTSSCCCST
T ss_pred             ccccccceeecc
Confidence            54  45665543

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*

Probab=98.64  E-value=1.6e-08  Score=91.78  Aligned_cols=124  Identities=27%  Similarity=0.662  Sum_probs=85.9

Q ss_pred             CCCCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCcccCC---------CCCCC---CCCCCCCCEeeecCCCCCeE
Q psy5752          14 DTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPES---------LGCNV---VKNCHANAECVYNATSAGYR   81 (222)
Q Consensus        14 ~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~~~---------~~C~~---~~~C~~~~~C~~~n~~g~~~   81 (222)
                      +.+|.++|+|..  .        .|.|++||+|.   .|+-..         ..|..   ..+|.+++.|+  .  +  +
T Consensus       434 s~~Cs~~G~C~~--g--------~C~C~~Gy~G~---~Cec~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~--~--G--~  494 (687)
T 3k6s_B          434 RSLCHGKGFLEC--G--------ICRCDTGYIGK---NCECQTQGRSSQELEGSCRKDNNSIICSGLGDCV--C--G--Q  494 (687)
T ss_dssp             SSTGGGSEEESS--S--------SEEECSSEEST---TSCEESSSCCCSGGGSTTSSSTTSCGGGSSEEEE--T--T--E
T ss_pred             CCCCCCCCEEeC--C--------EeEcCCCCcCC---cccccCCcCCccccCCCCCCCCCCCcCCCCCEEe--C--C--E
Confidence            356777788864  2        79999999999   787211         13764   13488899995  3  2  8


Q ss_pred             EecC------CCCccCCCeeecCCCcCCC---------CCCCCC----CCCCcccCCCccc---cCCCCCCC-CCCCCCC
Q psy5752          82 CQCA------QGYVGNGVECHPLKSCLED---------RSLCGK----DSQGYVGNGVECH---PLKSCLED-RSLCGKD  138 (222)
Q Consensus        82 C~C~------~G~~~~~~~C~~~~~C~~~---------~~~C~~----c~~g~~~~g~~C~---~id~C~~~-~~~C~~~  138 (222)
                      |.|.      +||.|..+++ ++..|...         .+.|..    |.+||.|.  .|+   +++.|... ...|.++
T Consensus       495 C~C~~~~~~~~G~~G~~Ce~-~~~~C~~~~~~~C~~~~~G~C~~g~C~C~~G~~G~--~Cec~~~~~~C~~~~g~~Cs~~  571 (687)
T 3k6s_B          495 CLCHTSDVPGKLIYGQYCEC-DTINCERYNGQVCGGPGRGLCFCGKCRCHPGFEGS--ACQCERTTEGCLNPRRVECSGR  571 (687)
T ss_dssp             EEECCCCSTTCCEESTTSCE-ESSCSCEETTEETSHHHHEEEETTEEEECTTCCST--TSCSCCSSCTTBCTTCSBTSSS
T ss_pred             EEcCCCCCCCCCcccccccc-ccccccCCCCcCcCCCCCCeEECCEEEcCCCCcCC--CCccCCCCCCCCCCCCCCCCCC
Confidence            9999      9999988764 34556532         122221    68899877  776   35788643 2359888


Q ss_pred             CeeeeCCCCeeEeecCCCCccCCCcccc
Q psy5752         139 ASCVVASQGHFHCECNEGFTGNGITCKP  166 (222)
Q Consensus       139 ~~C~n~~~g~~~C~C~~G~~gd~~~C~~  166 (222)
                      ++|..     .+|.|.+||.|  ..|+.
T Consensus       572 G~C~~-----g~C~C~~Gy~G--~~Ce~  592 (687)
T 3k6s_B          572 GRCRC-----NVCECHSGYQL--PLCQE  592 (687)
T ss_dssp             CCBCS-----SCBCCSTTCCT--TTTCC
T ss_pred             CcCCC-----CEEECCCCCcC--CCCCC
Confidence            99975     35999999998  56665

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=98.64  E-value=6.7e-09  Score=88.59  Aligned_cols=81  Identities=22%  Similarity=0.557  Sum_probs=21.7

Q ss_pred             cCCCCC-CCCCCCCCeecCCCCCCCCCCceeeecCCCCcc--CCCCCcccCCCCCCCCCCCCCCCEeeecCCCCCeEEec
Q psy5752           8 FSLSEC-DTPCHPNAQCTSPDEFNESREQAKCICNFGYTG--DGVTECNPESLGCNVVKNCHANAECVYNATSAGYRCQC   84 (222)
Q Consensus         8 ~~~~~C-~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g--~~~~~C~~~~~~C~~~~~C~~~~~C~~~n~~g~~~C~C   84 (222)
                      +|+|+| .+++.....|.+  .   .++| .|.|++||+.  ++. .|+++++ |....+|.+  .|+  |+.++|.|.|
T Consensus         1 ~~~~~C~~~~~~c~~~C~~--~---~g~~-~C~C~~G~~l~~~~~-~C~d~~e-C~~~~~C~~--~C~--~~~g~~~C~C   68 (386)
T 3v65_B            1 TGEENCNVNNGGCAQKCQM--I---RGAV-QCTCHTGYRLTEDGR-TCQDVNE-CAEEGYCSQ--GCT--NSEGAFQCWC   68 (386)
T ss_dssp             -----------------------------------------------------------CCTT--EEC-------CCEEC
T ss_pred             CCcCcccCCCCCCCCCCcC--C---CCCc-EeECCCCceECCCCC-ccCccce-eCCcCcccC--cCC--CCCCCCeEEE
Confidence            378999 555443448977  3   6667 9999999982  233 9988774 974478965  596  9999999999


Q ss_pred             CCCCc--cCCCeeecCCC
Q psy5752          85 AQGYV--GNGVECHPLKS  100 (222)
Q Consensus        85 ~~G~~--~~~~~C~~~~~  100 (222)
                      .+||.  .++..|..+++
T Consensus        69 ~~g~~l~~d~~~C~~~~~   86 (386)
T 3v65_B           69 EAGYELRPDRRSCKALGP   86 (386)
T ss_dssp             CTTEEECTTSSCEEECSS
T ss_pred             CCCceEcCCCCeECCccc
Confidence            99998  44677876554

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=98.62  E-value=1e-07  Score=87.27  Aligned_cols=66  Identities=18%  Similarity=0.411  Sum_probs=53.9

Q ss_pred             cCCCCCCCCCCCCCCCeeeeCCCCeeEeecCCCCcc-CCCccccCCCCC-----CCeeeecCCcEEEEcCCCCCC
Q psy5752         124 PLKSCLEDRSLCGKDASCVVASQGHFHCECNEGFTG-NGITCKPVRKKE-----SDFLLVNQGMFMLRVPYQPTR  192 (222)
Q Consensus       124 ~id~C~~~~~~C~~~~~C~n~~~g~~~C~C~~G~~g-d~~~C~~~~~~~-----~~~~~~~~g~~~~~~~~~~~~  192 (222)
                      ++++|..+++.|.  ++|++++++ |+|.|++||.+ ++.+|+++++|.     ...|.++.|+|.|.|+.++.+
T Consensus       293 ~~~eC~~~~~~C~--~~C~~~~~~-~~C~C~~G~~~~~~~~C~dideC~~~~~C~~~C~n~~g~y~C~C~~G~~~  364 (699)
T 1n7d_A          293 GTNECLDNNGGCS--HVCNDLKIG-YECLCPDGFQLVAQRRCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQL  364 (699)
T ss_dssp             CCCCTTSSTTTSC--TTCCCCTTC-CCCCCCSSSCCCSSSCCCCCCCCSSSSSCTTTCCBCSSCBCCCCCSSCBC
T ss_pred             ccccccccccCcC--CCcccCCCC-cEEeCCCCeEcCCCCcccCccccCCCCccccccccCCCCeeeeeeccccc
Confidence            5788987777785  479999755 99999999995 568899998885     246899999999999877664

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A

Probab=98.55  E-value=4.7e-08  Score=55.42  Aligned_cols=37  Identities=27%  Similarity=0.906  Sum_probs=32.0

Q ss_pred             cCCCCC-CCCCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCcc
Q psy5752           8 FSLSEC-DTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECN   53 (222)
Q Consensus         8 ~~~~~C-~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~   53 (222)
                      +|+|+| ++||.++++|++  .   .++| .|.|++||+|.   .|+
T Consensus         1 ~d~d~C~~~pC~ngg~C~~--~---~~~~-~C~C~~G~~G~---~Ce   38 (39)
T 1edm_B            1 VDGDQCESNPCLNGGSCKD--D---INSY-ECWCPFGFEGK---NCE   38 (39)
T ss_dssp             CCCCTTTTCCCCTTCEEEE--E---TTEE-EEECCTTCCST---TSC
T ss_pred             CccccCCCCCCCCCCEeEc--C---CCce-EeECCCCCcCC---ccC
Confidence            478999 899999999998  3   5666 99999999998   775

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*

Probab=98.46  E-value=6.8e-07  Score=77.09  Aligned_cols=122  Identities=22%  Similarity=0.452  Sum_probs=80.4

Q ss_pred             eeecCCCCccCCCCCcccCCCCCCCCCCCCCCCEeeecCCCCCeEEecCCCCccCCCeeecCCCcCCCCCCCCCCCCCcc
Q psy5752          37 KCICNFGYTGDGVTECNPESLGCNVVKNCHANAECVYNATSAGYRCQCAQGYVGNGVECHPLKSCLEDRSLCGKDSQGYV  116 (222)
Q Consensus        37 ~C~C~~G~~g~~~~~C~~~~~~C~~~~~C~~~~~C~~~n~~g~~~C~C~~G~~~~~~~C~~~~~C~~~~~~C~~c~~g~~  116 (222)
                      .|.|.+||.|+   .|+.   .|   .+|.+++.|.  +  +.++|.|++||.|..++  .            .|..+|.
T Consensus       186 ~c~C~~g~~G~---~C~~---~C---~~C~~~G~C~--~--~~g~C~C~~G~~G~~Ce--~------------~C~~g~~  238 (423)
T 2gy5_A          186 VRRCEAQKWGP---ECNH---LC---TACMNNGVCH--E--DTGECICPPGFMGRTCE--K------------ACELHTF  238 (423)
T ss_dssp             ECSSCTTEEST---TSCE---EC---CCCCTTCEEC--T--TTCCEECCTTEESTTSC--E------------ECCTTEE
T ss_pred             CCcCCCCCCCC---CCCC---CC---CCCCCCCEEE--C--CCCcEeCCCCccCCCcc--c------------ccCCCCC
Confidence            58899999998   7765   25   3788899995  4  56799999999988553  1            1334454


Q ss_pred             cCCCccccCCCCCCCCCCCCCCCeeeeCCCCeeEeecCCCCccCCCccccC-------------CCC-CCCeeeecCCcE
Q psy5752         117 GNGVECHPLKSCLEDRSLCGKDASCVVASQGHFHCECNEGFTGNGITCKPV-------------RKK-ESDFLLVNQGMF  182 (222)
Q Consensus       117 ~~g~~C~~id~C~~~~~~C~~~~~C~n~~~g~~~C~C~~G~~gd~~~C~~~-------------~~~-~~~~~~~~~g~~  182 (222)
                      +.  .|.+  +|. .++.|.+++.|..   ++|+|.|++||.|  ..|+..             -.| ....|....+  
T Consensus       239 g~--~C~~--~C~-~~~~C~~~g~C~~---~~~~C~C~~G~~G--~~C~~~C~~G~~G~~C~~~C~C~ngg~C~~~~~--  306 (423)
T 2gy5_A          239 GR--TCKE--RCS-GQEGCKSYVFCLP---DPYGCSCATGWKG--LQCNEACHPGFYGPDCKLRCSCNNGEMCDRFQG--  306 (423)
T ss_dssp             ST--TSCE--ECC-STTTTTTCCEEET---TTTEEECCBTCBS--GGGCBCCCTTBCSBTTCCBCCCTTCCEEETTTE--
T ss_pred             CC--CcCc--cCC-CCCCCCCCCEECC---CCCeEEeCCCccc--ccccCccCCCCcCCcccccccCCCCCEecCCCc--
Confidence            33  4553  565 2456888889963   3389999999998  455431             012 2335655443  


Q ss_pred             EEEcCCCCCCCCCCCc
Q psy5752         183 MLRVPYQPTRTDRGRP  198 (222)
Q Consensus       183 ~~~~~~~~~~~~~~~~  198 (222)
                       |.|+.+..+..+...
T Consensus       307 -C~C~~G~~G~~Ce~~  321 (423)
T 2gy5_A          307 -CLCSPGWQGLQCERE  321 (423)
T ss_dssp             -EECCTTCBSTTSCBC
T ss_pred             -eECCCCCcCCCCccC
Confidence             888887776554443

>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}

Probab=98.45  E-value=8.8e-08  Score=58.44  Aligned_cols=42  Identities=24%  Similarity=0.464  Sum_probs=33.2

Q ss_pred             cCCCCC-CCCCCCCCeecCC---CCCCCCCCceeeecCCCCccCCCCCcccCC
Q psy5752           8 FSLSEC-DTPCHPNAQCTSP---DEFNESREQAKCICNFGYTGDGVTECNPES   56 (222)
Q Consensus         8 ~~~~~C-~~~C~~~~~C~~~---~~~~~~g~~~~C~C~~G~~g~~~~~C~~~~   56 (222)
                      +++|+| ++||.|+|+|...   +.   .+.| .|.|++||+|.   .|+...
T Consensus         6 ~~~~eC~s~pC~NgGtC~~~~~~d~---~~~y-~C~C~~g~~G~---~CE~~v   51 (55)
T 3u7u_G            6 VKCAEKEKTFCVNGGECFMVKDLSN---PSRY-LCKCPNEFTGD---RCQNYV   51 (55)
T ss_dssp             EECCSTTTTTSCTTCEEEEECCC-----CCCE-EEEECTTEEST---TSCEEC
T ss_pred             ccCCCCcCCCCCCCCCcCCCCccCC---CCCE-eEeCCCCCcCC---CcCccC
Confidence            589999 9999999999421   12   4566 99999999999   898644

>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*

Probab=98.34  E-value=3.1e-07  Score=58.80  Aligned_cols=48  Identities=21%  Similarity=0.641  Sum_probs=39.7

Q ss_pred             ccCCCCCCCCCCCCCCCeeeeCCCCeeEeecCCCCc--cCCCccccCCCCCC
Q psy5752         123 HPLKSCLEDRSLCGKDASCVVASQGHFHCECNEGFT--GNGITCKPVRKKES  172 (222)
Q Consensus       123 ~~id~C~~~~~~C~~~~~C~n~~~g~~~C~C~~G~~--gd~~~C~~~~~~~~  172 (222)
                      .|+++|....+.|.+  .|+|+++++|.|.|++||.  .|+++|.++++++-
T Consensus         3 ~d~~eC~~~nggC~h--~C~n~~g~s~~C~C~~Gy~L~~D~~tC~d~dec~C   52 (69)
T 1kli_L            3 DDQLICVNENGGCEQ--YCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYPC   52 (69)
T ss_dssp             SCCCCTTSGGGGCSS--EEEEETTTEEEEECCTTEEECTTSSCEEECSSSCT
T ss_pred             cccccccCCCCCcCC--EeEcCCCCCEEEeCCCCCeECCCCCcccCcccccC
Confidence            468899877778975  7999975479999999998  58899999988753

>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A

Probab=98.31  E-value=7e-07  Score=54.11  Aligned_cols=39  Identities=28%  Similarity=0.749  Sum_probs=32.7

Q ss_pred             CCCCC-CC---CCCCCCeec--CCCCCCCCCCceeeecCCCCccCCCCCcccCC
Q psy5752           9 SLSEC-DT---PCHPNAQCT--SPDEFNESREQAKCICNFGYTGDGVTECNPES   56 (222)
Q Consensus         9 ~~~~C-~~---~C~~~~~C~--~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~~~   56 (222)
                      +|++| +.   ||.|+|+|+  +  .   .++| .|.|++||+|.   .|+..+
T Consensus         2 ~i~~C~~~~~~pC~ngg~C~~~~--~---~~~~-~C~C~~G~~G~---~Ce~~~   46 (53)
T 1egf_A            2 SYPGCPSSYDGYCLNGGVCMHIE--S---LDSY-TCNCVIGYSGD---RCQTRD   46 (53)
T ss_dssp             EECCCCTTSSCSSCSSCEEEEES--S---SSCE-EEECCTTCCSS---SSCCCS
T ss_pred             CcccCCCCCCCcCCCCcEEEeeC--C---CCCE-EEECCCCCcCC---cCCccC
Confidence            68899 65   999999999  5  3   5676 99999999999   897654

>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}

Probab=98.31  E-value=5.4e-07  Score=54.92  Aligned_cols=38  Identities=21%  Similarity=0.548  Sum_probs=30.1

Q ss_pred             cCCCCCCCCCCCCCCCeee-----eCCCCeeEeecCCCCccCCCcccc
Q psy5752         124 PLKSCLEDRSLCGKDASCV-----VASQGHFHCECNEGFTGNGITCKP  166 (222)
Q Consensus       124 ~id~C~~~~~~C~~~~~C~-----n~~~g~~~C~C~~G~~gd~~~C~~  166 (222)
                      ++++|.++|  |.++++|+     +.. +.|+|.|++||+|  ..|+.
T Consensus         7 ~~~eC~s~p--C~NgGtC~~~~~~d~~-~~y~C~C~~g~~G--~~CE~   49 (55)
T 3u7u_G            7 KCAEKEKTF--CVNGGECFMVKDLSNP-SRYLCKCPNEFTG--DRCQN   49 (55)
T ss_dssp             ECCSTTTTT--SCTTCEEEEECCC--C-CCEEEEECTTEES--TTSCE
T ss_pred             cCCCCcCCC--CCCCCCcCCCCccCCC-CCEeEeCCCCCcC--CCcCc
Confidence            689998776  99999995     444 3499999999999  67763

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A

Probab=98.31  E-value=5.8e-07  Score=50.79  Aligned_cols=37  Identities=27%  Similarity=0.650  Sum_probs=30.4

Q ss_pred             cCCCCCCCCCCCCCCCeeeeCCCCeeEeecCCCCccCCCccc
Q psy5752         124 PLKSCLEDRSLCGKDASCVVASQGHFHCECNEGFTGNGITCK  165 (222)
Q Consensus       124 ~id~C~~~~~~C~~~~~C~n~~~g~~~C~C~~G~~gd~~~C~  165 (222)
                      ++++|...+  |.++++|++.. ++|+|.|++||+|  ..|+
T Consensus         2 d~d~C~~~p--C~ngg~C~~~~-~~~~C~C~~G~~G--~~Ce   38 (39)
T 1edm_B            2 DGDQCESNP--CLNGGSCKDDI-NSYECWCPFGFEG--KNCE   38 (39)
T ss_dssp             CCCTTTTCC--CCTTCEEEEET-TEEEEECCTTCCS--TTSC
T ss_pred             ccccCCCCC--CCCCCEeEcCC-CceEeECCCCCcC--CccC
Confidence            578898655  99999999986 5699999999998  4553

>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A

Probab=98.30  E-value=7.2e-08  Score=60.13  Aligned_cols=46  Identities=24%  Similarity=0.619  Sum_probs=36.9

Q ss_pred             CCccCCCCC-CCCCCCC--CeecCCCCCCCCCCceeeecCCCCc-cCCCCCcccCCCCCC
Q psy5752           5 PIRFSLSEC-DTPCHPN--AQCTSPDEFNESREQAKCICNFGYT-GDGVTECNPESLGCN   60 (222)
Q Consensus         5 ~~~~~~~~C-~~~C~~~--~~C~~~~~~~~~g~~~~C~C~~G~~-g~~~~~C~~~~~~C~   60 (222)
                      ..+.++|+| ++||.++  ++|++.     .++| .|.|++||+ |.   .|++..+ |.
T Consensus         6 ~~~~~~d~C~snPC~nga~gtC~~~-----~g~y-~C~C~~Gy~~G~---~C~~~~~-C~   55 (61)
T 2k2s_B            6 QLSETPAACSSNPCGPEAAGTCKET-----NSGY-ICRCNQGYRISL---DGTGNVT-CI   55 (61)
T ss_dssp             -CTTSCCHHHHCSSCSSSCCEEEEC-----SSEE-EEECCTTEEEEE---CSSSCEE-EE
T ss_pred             hhcCCCCcCcCCCCcCCCccccccC-----CCce-EeECCCCCccCC---CCCCCCE-ec
Confidence            357789999 9999998  899993     5666 999999999 98   7876543 54

>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...

Probab=98.28  E-value=4.6e-07  Score=55.36  Aligned_cols=45  Identities=29%  Similarity=0.630  Sum_probs=36.6

Q ss_pred             CCCCCCCCCCCCCCeeeeCCCCeeEeecCCCCc--cCCCccccCCCCCCC
Q psy5752         126 KSCLEDRSLCGKDASCVVASQGHFHCECNEGFT--GNGITCKPVRKKESD  173 (222)
Q Consensus       126 d~C~~~~~~C~~~~~C~n~~~g~~~C~C~~G~~--gd~~~C~~~~~~~~~  173 (222)
                      |||+..++.|.+  .|+|++ |+|+|.|++||.  .|+++|.++++++-.
T Consensus         2 dEC~~~~~~C~~--~C~nt~-Gsy~C~C~~Gy~L~~d~~~C~didec~cg   48 (55)
T 2jkh_L            2 KLCSLDNGDCDQ--FCHEEQ-NSVVCSCARGYTLADNGKACIPTGPYPCG   48 (55)
T ss_dssp             CCTTTGGGGCSS--EEEEET-TEEEEECCTTEEECTTSSCEEESSSSCTT
T ss_pred             ccccCCCCCcCc--EeEcCC-CCeEEeCCCCCEECCCCCeeccCccccCC
Confidence            678766667864  899997 669999999998  578899999987543

>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A

Probab=98.21  E-value=2.5e-07  Score=74.92  Aligned_cols=46  Identities=28%  Similarity=0.646  Sum_probs=37.9

Q ss_pred             ccCCCCCCCCCCCCCCCeeeeCCCCeeEeecCCCCccCCCccccCCC
Q psy5752         123 HPLKSCLEDRSLCGKDASCVVASQGHFHCECNEGFTGNGITCKPVRK  169 (222)
Q Consensus       123 ~~id~C~~~~~~C~~~~~C~n~~~g~~~C~C~~G~~gd~~~C~~~~~  169 (222)
                      +|+|||..+.+.|+.++.|+|+. |+|.|.|.+||.|||..|.+++.
T Consensus         3 ~DiDEC~~~~~~C~~~a~C~Nt~-Gsy~C~C~~Gy~GnG~~C~d~d~   48 (285)
T 1gl4_A            3 LAQQTCANNRHQCSVHAECRDYA-TGFCCRCVANYTGNGRQCVAEGS   48 (285)
T ss_dssp             ----CHHHHGGGSCTTEEEEECS-SCEEEEECTTEEECSSSEEETTC
T ss_pred             ccchhccCCCCCCCCCCEeEcCC-CCeEEEcCCCCCCCCCcCCCCCC
Confidence            46899987778899889999997 55999999999999999999876

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=98.19  E-value=8e-07  Score=82.42  Aligned_cols=69  Identities=25%  Similarity=0.624  Sum_probs=54.3

Q ss_pred             eecCCCCCCCCCCceeeecCCCCcc-CCCCCcccCCCCCCCCCCCCCCCEeeecCCCCCeEEecCCCCcc--CCCeeecC
Q psy5752          22 QCTSPDEFNESREQAKCICNFGYTG-DGVTECNPESLGCNVVKNCHANAECVYNATSAGYRCQCAQGYVG--NGVECHPL   98 (222)
Q Consensus        22 ~C~~~~~~~~~g~~~~C~C~~G~~g-~~~~~C~~~~~~C~~~~~C~~~~~C~~~n~~g~~~C~C~~G~~~--~~~~C~~~   98 (222)
                      .|+++     .++| .|.|++||++ ++. .|+++++ |....+|.  +.|+  |+.++|+|.|.+||.+  ++..|.++
T Consensus       325 ~C~~~-----~~~y-~C~C~~Gy~l~~g~-~C~dide-C~~~~~C~--~~C~--n~~gsy~C~C~~Gy~l~~~~~~C~~~  392 (791)
T 3m0c_C          325 VCNDL-----KIGY-ECLCPDGFQLVAQR-RCEDIDE-CQDPDTCS--QLCV--NLEGGYKCQCEEGFQLDPHTKACKAV  392 (791)
T ss_dssp             EEEEC-----SBSE-EEECCTTCEEETTT-EEECCCC-CSSSSSCT--TTCC--BCSSCBCCCCCSSEECCSSCCCCEET
T ss_pred             cccCC-----CCCc-ccCCCCCCccCCCC-ccccCcc-cCCCCCCC--Ceee--cCCCCceeecCCCCEeCCCCceeeec
Confidence            89983     6677 9999999975 233 9998885 97546774  4896  9999999999999985  56778877


Q ss_pred             CCcC
Q psy5752          99 KSCL  102 (222)
Q Consensus        99 ~~C~  102 (222)
                      +++.
T Consensus       393 ~~~p  396 (791)
T 3m0c_C          393 GSIA  396 (791)
T ss_dssp             TSCC
T ss_pred             cccc
Confidence            7653

>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A

Probab=98.16  E-value=2.7e-06  Score=57.55  Aligned_cols=80  Identities=28%  Similarity=0.622  Sum_probs=58.7

Q ss_pred             CCCCCCCCCCCEeeecCCCCCeEEecCCCCccCCCeeecCCCcCCCCCCCCCCCCCcccCCCccccCCCCCCCCCCCCCC
Q psy5752          59 CNVVKNCHANAECVYNATSAGYRCQCAQGYVGNGVECHPLKSCLEDRSLCGKDSQGYVGNGVECHPLKSCLEDRSLCGKD  138 (222)
Q Consensus        59 C~~~~~C~~~~~C~~~n~~g~~~C~C~~G~~~~~~~C~~~~~C~~~~~~C~~c~~g~~~~g~~C~~id~C~~~~~~C~~~  138 (222)
                      |.. ..|..++.|. +...+...|+|.+||.+++..|..++                         .+.|+.+++.|..+
T Consensus         7 C~~-~~C~~NA~C~-r~~~g~e~C~C~~gy~gdg~~Cv~~~-------------------------~~sC~~nNGGCd~n   59 (99)
T 1ob1_C            7 CVK-KQCPQNSGCF-RHLDEREECKCLLNYKQEGDKCVENP-------------------------NPTCNENNGGCDAD   59 (99)
T ss_dssp             CCS-CCCCTTEEEE-CCTTSCCEEEECTTEEEETTEEEECS-------------------------CCCSTTGGGGCCTT
T ss_pred             ecc-CCCCCCCCeE-EcCCCCEEEEecCCeecCCCeEeeCC-------------------------CCChhhcCCCcCCC
Confidence            444 5677899996 45688999999999999877555431                         14566666779999


Q ss_pred             CeeeeCCC----CeeEeecCCCCc---cCCCccc
Q psy5752         139 ASCVVASQ----GHFHCECNEGFT---GNGITCK  165 (222)
Q Consensus       139 ~~C~n~~~----g~~~C~C~~G~~---gd~~~C~  165 (222)
                      |.|.....    +...|.|.+||.   .+|..|+
T Consensus        60 A~C~~~~~~~~~~ki~C~C~~g~~~~~~~gvf~~   93 (99)
T 1ob1_C           60 AKCTEEDSGSNGKKITCECTKPDSYPLFDGIFCS   93 (99)
T ss_dssp             EEEECCSCSSSSCCCEEEECSTTCCEEGGGTEEC
T ss_pred             ceeEecCCcccCCceEeEeCCCCcccceeEEEec
Confidence            99997743    348999999987   3455554

>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A

Probab=98.14  E-value=3.3e-07  Score=57.07  Aligned_cols=42  Identities=19%  Similarity=0.623  Sum_probs=33.8

Q ss_pred             ccccCCCCCCCCCCCCCC--CeeeeCCCCeeEeecCCCCc-cCCCccccC
Q psy5752         121 ECHPLKSCLEDRSLCGKD--ASCVVASQGHFHCECNEGFT-GNGITCKPV  167 (222)
Q Consensus       121 ~C~~id~C~~~~~~C~~~--~~C~n~~~g~~~C~C~~G~~-gd~~~C~~~  167 (222)
                      .++++|+|..+|  |.++  ++|++.. ++|.|.|++||+ |  ..|+..
T Consensus         7 ~~~~~d~C~snP--C~nga~gtC~~~~-g~y~C~C~~Gy~~G--~~C~~~   51 (61)
T 2k2s_B            7 LSETPAACSSNP--CGPEAAGTCKETN-SGYICRCNQGYRIS--LDGTGN   51 (61)
T ss_dssp             CTTSCCHHHHCS--SCSSSCCEEEECS-SEEEEECCTTEEEE--ECSSSC
T ss_pred             hcCCCCcCcCCC--CcCCCccccccCC-CceEeECCCCCccC--CCCCCC
Confidence            467789998766  9988  7999997 559999999999 8  556543

>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}

Probab=98.13  E-value=1.8e-06  Score=55.54  Aligned_cols=36  Identities=17%  Similarity=0.468  Sum_probs=28.7

Q ss_pred             cCCCCCCCCCCCCCCCeeeeCCCCeeEeec-CCCCccC
Q psy5752         124 PLKSCLEDRSLCGKDASCVVASQGHFHCEC-NEGFTGN  160 (222)
Q Consensus       124 ~id~C~~~~~~C~~~~~C~n~~~g~~~C~C-~~G~~gd  160 (222)
                      |||||...++.|..+++|+|+. |+|+|.+ ..||.++
T Consensus         2 DidEC~~~~~~C~~~~~C~Nt~-Gsy~C~~~~~g~~~~   38 (71)
T 2kl7_A            2 DVNECLTIPEACKGEMKCINHY-GGYLCLPRSAAVIND   38 (71)
T ss_dssp             CSCCTTCCCCSCTTEEEEEETT-CCEEEEETTSCCCSC
T ss_pred             ccccccCCCCCCCCCCEeECCC-CCeEecccCCccccc
Confidence            6899987778898888999997 5599984 4577753

>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A

Probab=98.12  E-value=9.1e-07  Score=51.90  Aligned_cols=40  Identities=30%  Similarity=0.688  Sum_probs=31.0

Q ss_pred             cCCCCC-C---CCCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCcccC
Q psy5752           8 FSLSEC-D---TPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPE   55 (222)
Q Consensus         8 ~~~~~C-~---~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~~   55 (222)
                      +++++| +   +||.| |+|+....   .+.| .|.|++||+|.   .|+..
T Consensus         1 ~~i~~C~~~~~~pC~n-G~C~~~~~---~~~~-~C~C~~GytG~---~Ce~~   44 (46)
T 1k36_A            1 VSITKCSSDMNGYCLH-GQCIYLVD---MSQN-YCRCEVGYTGV---RCEHF   44 (46)
T ss_dssp             CCEECCCTTCCSSCSS-EEEEEETT---TTEE-EEEECTTCSST---TSCCC
T ss_pred             CccccCCCCCCCCCCC-CEeeccCC---CCCE-EEECCCCCccC---CCCcc
Confidence            367899 6   89998 89986311   3455 99999999999   88754

>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A

Probab=98.11  E-value=2.3e-06  Score=67.13  Aligned_cols=103  Identities=27%  Similarity=0.700  Sum_probs=65.5

Q ss_pred             CCCCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCcccCC---------CCCCC---CCCCCCCCEeeecCCCCCeE
Q psy5752          14 DTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPES---------LGCNV---VKNCHANAECVYNATSAGYR   81 (222)
Q Consensus        14 ~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~~~---------~~C~~---~~~C~~~~~C~~~n~~g~~~   81 (222)
                      +..|.++|+|+.  .        .|.|++||+|.   .|+-..         ..|..   ..+|..++.|+  .    ..
T Consensus        95 ~~~Csg~G~C~~--g--------~C~C~~G~~G~---~Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~--~----g~  155 (217)
T 2p28_B           95 RSLCHGKGFLEC--G--------ICRCDTGYIGK---NCECQTQGRSSQELEGSCRKDNNSIICSGLGDCV--C----GQ  155 (217)
T ss_dssp             -CTTTTSEEEET--T--------EEEECTTEEST---TSCEECCCCC-GGGGGGGBSSTTSCBGGGTEEEE--T----TE
T ss_pred             CCccCCCceEEC--C--------EEECCCCccCC---cccccCcccccccCCCcCCCCCCCCCCCCCCEEe--C----Cc
Confidence            356888899976  2        89999999999   776221         12542   25788889995  3    37


Q ss_pred             EecCCCCccCCCeeecCCCcCCCCCCCCCCCCCcccCCCccc-cCCCCCCC-CCCCCCC--CeeeeCCCCeeEeecCCCC
Q psy5752          82 CQCAQGYVGNGVECHPLKSCLEDRSLCGKDSQGYVGNGVECH-PLKSCLED-RSLCGKD--ASCVVASQGHFHCECNEGF  157 (222)
Q Consensus        82 C~C~~G~~~~~~~C~~~~~C~~~~~~C~~c~~g~~~~g~~C~-~id~C~~~-~~~C~~~--~~C~n~~~g~~~C~C~~G~  157 (222)
                      |.|.+||.+...                     |.  |..|+ +++.|... ...|..+  ++|..   +  +|.|.+||
T Consensus       156 C~C~~gw~~~~~---------------------~~--G~~Ce~~~~~C~~~~g~~C~~~~~G~C~~---g--~C~C~~G~  207 (217)
T 2p28_B          156 CLCHTSDVPGKL---------------------IY--GQYCECDTINCERYNGQVCGGPGRGLCFC---G--KCRCHPGF  207 (217)
T ss_dssp             EEECCCCSTTCC---------------------EE--STTSCEESSCSCEETTEETTCTTTEEEET---T--EEEECTTE
T ss_pred             eECCCCCCCccc---------------------EE--CCCcccCCccCCCCCCCCCCCCCCcEEeC---C--eeECCCCC
Confidence            999999632210                     11  11333 23455432 1247766  89984   3  79999999


Q ss_pred             ccCCCccc
Q psy5752         158 TGNGITCK  165 (222)
Q Consensus       158 ~gd~~~C~  165 (222)
                      +|  ..|+
T Consensus       208 ~G--~~C~  213 (217)
T 2p28_B          208 EG--SACQ  213 (217)
T ss_dssp             ES--TTSC
T ss_pred             cc--CCcC
Confidence            99  4554

>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4

Probab=98.10  E-value=9.4e-06  Score=55.24  Aligned_cols=79  Identities=24%  Similarity=0.563  Sum_probs=59.4

Q ss_pred             CCCCCCCCCCCEeeecCCCCCeEEecCCCCccCCCeeecCCCcCCCCCCCCCCCCCcccCCCccccCCC-CCCCCCCCCC
Q psy5752          59 CNVVKNCHANAECVYNATSAGYRCQCAQGYVGNGVECHPLKSCLEDRSLCGKDSQGYVGNGVECHPLKS-CLEDRSLCGK  137 (222)
Q Consensus        59 C~~~~~C~~~~~C~~~n~~g~~~C~C~~G~~~~~~~C~~~~~C~~~~~~C~~c~~g~~~~g~~C~~id~-C~~~~~~C~~  137 (222)
                      |.. ..|..++.|. +..+|..+|+|..||.+++..|                           ..+++ |+.+.+.|+.
T Consensus        13 C~~-t~Cp~NA~C~-r~~~G~e~CrCl~gY~~dg~~C---------------------------v~~Np~C~~nNGGCd~   63 (105)
T 1n1i_A           13 CID-TNVPENAACY-RYLDGTEEWRCLLGFKEVGGKC---------------------------VPASITCEENNGGCAP   63 (105)
T ss_dssp             CCS-SCCCTTEEEE-ECTTSCEEEEECTTEEECSSSE---------------------------EECCCCTTSGGGGSCT
T ss_pred             ecC-CCCCCCCCeE-ECCCCCEeEEEECCeeccCCEE---------------------------EECCcchhhcCCCcCC
Confidence            554 5677899997 4588999999999999987644                           44455 5556677999


Q ss_pred             CCeeeeCCCCeeEeecCCCCc---cCCCcccc
Q psy5752         138 DASCVVASQGHFHCECNEGFT---GNGITCKP  166 (222)
Q Consensus       138 ~~~C~n~~~g~~~C~C~~G~~---gd~~~C~~  166 (222)
                      +|.|.......-.|.|.++|.   .+|..|..
T Consensus        64 nAeC~~~~~~ki~C~C~~~~~~~~~~GvfC~~   95 (105)
T 1n1i_A           64 EAECTMDDKKEVECKCTKEGSEPLFEGVFCSS   95 (105)
T ss_dssp             TSEEEECTTSCEEEECCSTTCCEEGGGTEECC
T ss_pred             CcEeEECCCCEEEeECCCCCCccccceEEECC
Confidence            999998853448999999976   35566654

>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1

Probab=98.06  E-value=2.8e-06  Score=49.51  Aligned_cols=39  Identities=21%  Similarity=0.528  Sum_probs=29.6

Q ss_pred             CCC-CC---CCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCcccCC
Q psy5752          11 SEC-DT---PCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPES   56 (222)
Q Consensus        11 ~~C-~~---~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~~~   56 (222)
                      ++| +.   ||.|+|+|+....   .++| .|.|++||+|.   .|+...
T Consensus         1 ~~C~~~~~~pC~ngg~C~~~~~---~~~~-~C~C~~G~~G~---~Ce~~~   43 (45)
T 1a3p_A            1 PGXPSSYDGYCLNGGVXMHIES---LDSY-TCNCVIGYSGD---RCQTRD   43 (45)
T ss_dssp             CCCTTCCSSCCSSSCEEEECTT---TSSE-EEECCTTEETT---TTCEEC
T ss_pred             CCcccCCCCCCCCCCEEEeecC---CCCE-EEEcCCCCcCC---cCCccc
Confidence            367 56   9999999982113   5666 99999999999   887543

>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*

Probab=97.99  E-value=3.9e-06  Score=50.76  Aligned_cols=43  Identities=23%  Similarity=0.760  Sum_probs=33.6

Q ss_pred             CCCCCCCCCCCCeeeeCCCCeeEeecCCCCc--cCCCccccCCCCCC
Q psy5752         128 CLEDRSLCGKDASCVVASQGHFHCECNEGFT--GNGITCKPVRKKES  172 (222)
Q Consensus       128 C~~~~~~C~~~~~C~n~~~g~~~C~C~~G~~--gd~~~C~~~~~~~~  172 (222)
                      |+..++.|.+  .|+|+.+++|+|.|++||.  .|+++|.++++++-
T Consensus         2 C~~~nggC~~--~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~d~dec~c   46 (53)
T 2bz6_L            2 CVNENGGCEQ--YCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYPC   46 (53)
T ss_dssp             TTSGGGGCSS--EEEEETTTEEEEECCTTEEECTTSSCEEECSSSCT
T ss_pred             CcCCCCCcCC--EeEcCCCCCEEeeCCCCCEECCCCCcccCCccccC
Confidence            4444456865  7999975479999999998  57899999998753

>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A

Probab=97.96  E-value=9e-06  Score=49.11  Aligned_cols=40  Identities=20%  Similarity=0.671  Sum_probs=30.9

Q ss_pred             cCCCCCCC-CCCCCCCCeee--eCCCCeeEeecCCCCccCCCcccc
Q psy5752         124 PLKSCLED-RSLCGKDASCV--VASQGHFHCECNEGFTGNGITCKP  166 (222)
Q Consensus       124 ~id~C~~~-~~~C~~~~~C~--n~~~g~~~C~C~~G~~gd~~~C~~  166 (222)
                      +|++|... .++|.++++|+  +.. ++|.|.|++||+|  ..|+.
T Consensus         2 ~i~~C~~~~~~pC~ngg~C~~~~~~-~~~~C~C~~G~~G--~~Ce~   44 (53)
T 1egf_A            2 SYPGCPSSYDGYCLNGGVCMHIESL-DSYTCNCVIGYSG--DRCQT   44 (53)
T ss_dssp             EECCCCTTSSCSSCSSCEEEEESSS-SCEEEECCTTCCS--SSSCC
T ss_pred             CcccCCCCCCCcCCCCcEEEeeCCC-CCEEEECCCCCcC--CcCCc
Confidence            57888754 23599999999  665 4599999999998  67764

>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1

Probab=97.95  E-value=9.2e-06  Score=48.90  Aligned_cols=40  Identities=23%  Similarity=0.670  Sum_probs=30.0

Q ss_pred             cCCCCCCC--------CCCCCCCCeeeeCCCCeeEeecCCCCcc--CCCcccc
Q psy5752         124 PLKSCLED--------RSLCGKDASCVVASQGHFHCECNEGFTG--NGITCKP  166 (222)
Q Consensus       124 ~id~C~~~--------~~~C~~~~~C~n~~~g~~~C~C~~G~~g--d~~~C~~  166 (222)
                      +||||...        .+.|.  ++|+|+. |+|+|.|++||.+  ++.+|.+
T Consensus         3 DidEC~~~~~~~~~~~~~~C~--~~C~n~~-Gsy~C~C~~Gy~~~~d~~~C~~   52 (53)
T 1apq_A            3 DLDECASRSKSGEEDPQPQCQ--HLCHNYV-GGYFCSCRPGYELQEDRHSCQA   52 (53)
T ss_dssp             SCCTTTCSTTTCCCSSSCTTS--SEEEEET-TEEEEECSTTCEECTTSSCEEC
T ss_pred             ccccccCcccccccccCCCCC--CEeECCC-CCeEEECCCCCeECCCCCccCC
Confidence            67888653        25686  3899997 6699999999994  5566753

>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A

Probab=97.94  E-value=1.2e-05  Score=54.33  Aligned_cols=69  Identities=25%  Similarity=0.621  Sum_probs=54.4

Q ss_pred             CCCCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCcccCC-CCCCC-CCCCCCCCEeeecCCC----CCeEEecCCC
Q psy5752          14 DTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPES-LGCNV-VKNCHANAECVYNATS----AGYRCQCAQG   87 (222)
Q Consensus        14 ~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~~~-~~C~~-~~~C~~~~~C~~~n~~----g~~~C~C~~G   87 (222)
                      ...|..++.|....    .+.. .|+|.+||.+++. .|..+. ..|.. ...|..+|.|. ...+    +...|.|.+|
T Consensus         9 ~~~C~~NA~C~r~~----~g~e-~C~C~~gy~gdg~-~Cv~~~~~sC~~nNGGCd~nA~C~-~~~~~~~~~ki~C~C~~g   81 (99)
T 1ob1_C            9 KKQCPQNSGCFRHL----DERE-ECKCLLNYKQEGD-KCVENPNPTCNENNGGCDADAKCT-EEDSGSNGKKITCECTKP   81 (99)
T ss_dssp             SCCCCTTEEEECCT----TSCC-EEEECTTEEEETT-EEEECSCCCSTTGGGGCCTTEEEE-CCSCSSSSCCCEEEECST
T ss_pred             cCCCCCCCCeEEcC----CCCE-EEEecCCeecCCC-eEeeCCCCChhhcCCCcCCCceeE-ecCCcccCCceEeEeCCC
Confidence            45678899998852    6776 9999999999887 898763 35876 47799999997 2334    6789999999


Q ss_pred             Cc
Q psy5752          88 YV   89 (222)
Q Consensus        88 ~~   89 (222)
                      |.
T Consensus        82 ~~   83 (99)
T 1ob1_C           82 DS   83 (99)
T ss_dssp             TC
T ss_pred             Cc
Confidence            86

>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1

Probab=97.93  E-value=4.4e-06  Score=50.10  Aligned_cols=40  Identities=18%  Similarity=0.517  Sum_probs=32.1

Q ss_pred             CCCCCCCCCCCeeeeCCCCeeEeecCCCCc--cCCCccccCCCCC
Q psy5752         129 LEDRSLCGKDASCVVASQGHFHCECNEGFT--GNGITCKPVRKKE  171 (222)
Q Consensus       129 ~~~~~~C~~~~~C~n~~~g~~~C~C~~G~~--gd~~~C~~~~~~~  171 (222)
                      +..++.|.+  .|+|++ |+|+|.|++||.  .|+++|.++++++
T Consensus         2 ~~~ng~C~~--~C~n~~-gs~~C~C~~Gy~L~~d~~tC~dide~p   43 (51)
T 1kig_L            2 SLDNGGCDQ--FCREER-SEVRCSCAHGYVLGDDSKSCVSTERFP   43 (51)
T ss_dssp             CTTTTSSSS--CCCEET-TEECCCCCTTEEECTTSSCEEECSSSC
T ss_pred             CCCCCCcCC--EeEcCC-CCeEEeCCCCcEECCCCCccccCCccc
Confidence            344566865  699997 669999999998  6889999998864

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*

Probab=97.92  E-value=5.4e-06  Score=75.29  Aligned_cols=103  Identities=27%  Similarity=0.714  Sum_probs=73.9

Q ss_pred             CCCCCCeecCCCCCCCCCCceeeecC------CCCccCCCCCcccCCCCCCC--CCCCCC--CCEeeecCCCCCeEEecC
Q psy5752          16 PCHPNAQCTSPDEFNESREQAKCICN------FGYTGDGVTECNPESLGCNV--VKNCHA--NAECVYNATSAGYRCQCA   85 (222)
Q Consensus        16 ~C~~~~~C~~~~~~~~~g~~~~C~C~------~G~~g~~~~~C~~~~~~C~~--~~~C~~--~~~C~~~n~~g~~~C~C~   85 (222)
                      +|.++|.|+.  .        .|.|+      +||+|.   .|+.....|..  ..+|.+  ++.|.  .  +  .|.|.
T Consensus       483 ~Cs~~G~C~~--G--------~C~C~~~~~~~~G~~G~---~Ce~~~~~C~~~~~~~C~~~~~G~C~--~--g--~C~C~  543 (687)
T 3k6s_B          483 ICSGLGDCVC--G--------QCLCHTSDVPGKLIYGQ---YCECDTINCERYNGQVCGGPGRGLCF--C--G--KCRCH  543 (687)
T ss_dssp             GGGSSEEEET--T--------EEEECCCCSTTCCEEST---TSCEESSCSCEETTEETSHHHHEEEE--T--T--EEEEC
T ss_pred             cCCCCCEEeC--C--------EEEcCCCCCCCCCcccc---ccccccccccCCCCcCcCCCCCCeEE--C--C--EEEcC
Confidence            5989999986  2        79999      999999   89844445874  246887  88995  3  2  89999


Q ss_pred             CCCccCCCeee-cCCCcCCC-------CCCCCC----CCCCcccCCCccccCCCCCCCCCCCCCCCeee
Q psy5752          86 QGYVGNGVECH-PLKSCLED-------RSLCGK----DSQGYVGNGVECHPLKSCLEDRSLCGKDASCV  142 (222)
Q Consensus        86 ~G~~~~~~~C~-~~~~C~~~-------~~~C~~----c~~g~~~~g~~C~~id~C~~~~~~C~~~~~C~  142 (222)
                      +||.|..+.|. +++.|...       .+.|..    |..||.|.  .|+....|.   ..|.+++.|+
T Consensus       544 ~G~~G~~Cec~~~~~~C~~~~g~~Cs~~G~C~~g~C~C~~Gy~G~--~Ce~c~~C~---~~C~~~g~Cv  607 (687)
T 3k6s_B          544 PGFEGSACQCERTTEGCLNPRRVECSGRGRCRCNVCECHSGYQLP--LCQECPGCP---SPCGKYISCA  607 (687)
T ss_dssp             TTCCSTTSCSCCSSCTTBCTTCSBTSSSCCBCSSCBCCSTTCCTT--TTCCCTTSC---CCCTTTHHHH
T ss_pred             CCCcCCCCccCCCCCCCCCCCCCCCCCCCcCCCCEEECCCCCcCC--CCCCCCCCC---cccCCCCCCC
Confidence            99999988764 35667643       223332    68899877  888655664   3487777776

>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A

Probab=97.86  E-value=3.5e-06  Score=52.86  Aligned_cols=47  Identities=21%  Similarity=0.427  Sum_probs=33.2

Q ss_pred             CCCC-CCCCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCcccCCCCCC
Q psy5752          10 LSEC-DTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPESLGCN   60 (222)
Q Consensus        10 ~~~C-~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~~~~~C~   60 (222)
                      .++| ++||.|+|+|++....+..++| .|.|++||+|.   .|+...+++.
T Consensus         6 c~~C~~~pC~ngG~C~~~~~~~~~~~y-~C~C~~Gf~G~---~Ce~~i~~~~   53 (63)
T 1hae_A            6 CAEKEKTFCVNGGECFMVKDLSNPSRY-LCKCQPGFTGA---RCTENVPMKV   53 (63)
T ss_dssp             CCHHHHTTSCTTCEEEEEESSSSSCCE-EEECCTTEEST---TSCEECCSSC
T ss_pred             cCCCCCCcCCCCcEEecCCccCCCCCE-EEECCCCCcCC---ccCcCcCccc
Confidence            4678 8999999999851000004566 99999999999   9975443454

>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A

Probab=97.72  E-value=2.7e-05  Score=58.25  Aligned_cols=114  Identities=25%  Similarity=0.576  Sum_probs=64.5

Q ss_pred             CCCCCCeecCCCCCCCCCCceee-ecCCCCccCCCCCcccCC--------------CCCCCCCCCCCC------CEeeec
Q psy5752          16 PCHPNAQCTSPDEFNESREQAKC-ICNFGYTGDGVTECNPES--------------LGCNVVKNCHAN------AECVYN   74 (222)
Q Consensus        16 ~C~~~~~C~~~~~~~~~g~~~~C-~C~~G~~g~~~~~C~~~~--------------~~C~~~~~C~~~------~~C~~~   74 (222)
                      ||.++++|...+.   .+.+ .| .|++||+|.   .|+.=.              ..|.. -.|..+      +.|.  
T Consensus         2 ~C~~~g~C~~~~~---~g~~-~C~~C~~g~~G~---~Ce~C~~g~~g~~~~~~~~~~~C~~-C~C~~~~~~~~~~~C~--   71 (162)
T 1klo_A            2 PCPGGSSCAIVPK---TKEV-VCTHCPTGTAGK---RCELCDDGYFGDPLGSNGPVRLCRP-CQCNDNIDPNAVGNCN--   71 (162)
T ss_dssp             CSCTTCCEEECSS---SCCE-EECSCCTTEEST---TSCEECTTEEEETTCTTSSCEEEEE-CCSTTCBCTTCSCCBC--
T ss_pred             cCcCcCcccccCC---CCCE-EeCCCCCCCcCC---CCcCCCCCCcCCcccccCCCCCCee-CcCCCCCCcccCCccc--
Confidence            6889999987432   3556 89 799999998   776300              01211 223322      3452  


Q ss_pred             CCCCCeEE-ecCCCCccCCCeeecCCCcCCCCCCCCCCCCCcccCCCccc--cCCCCCCCCCCCCCCC------eeeeCC
Q psy5752          75 ATSAGYRC-QCAQGYVGNGVECHPLKSCLEDRSLCGKDSQGYVGNGVECH--PLKSCLEDRSLCGKDA------SCVVAS  145 (222)
Q Consensus        75 n~~g~~~C-~C~~G~~~~~~~C~~~~~C~~~~~~C~~c~~g~~~~g~~C~--~id~C~~~~~~C~~~~------~C~n~~  145 (222)
                      .  ...+| .|+++|+|...               ..|++||.++  .+.  ..+.|..-  .|...+      .|....
T Consensus        72 ~--~tG~C~~C~~g~~G~~C---------------e~C~~Gy~g~--~~~~~~~~~C~~C--~C~~~Gs~~~~~~Cd~~t  130 (162)
T 1klo_A           72 R--LTGECLKCIYNTAGFYC---------------DRCKEGFFGN--PLAPNPADKCKAC--ACNPYGTVQQQSSCNPVT  130 (162)
T ss_dssp             T--TTCCBCCBCTTEETTTT---------------CEECTTEEEC--TTCSSGGGSEEEC--CCCTTTBGGGCCCCCTTT
T ss_pred             C--CCCcccCCCCCCcCCCc---------------CcCchhhcCC--ccccCCCCCCeec--cCCCCCccCCCCCCCCCC
Confidence            1  23467 48888777643               3356777665  222  12333321  144332      675442


Q ss_pred             CCeeEeecCCCCccCCCccc
Q psy5752         146 QGHFHCECNEGFTGNGITCK  165 (222)
Q Consensus       146 ~g~~~C~C~~G~~gd~~~C~  165 (222)
                         .+|.|.+||+|  ..|.
T Consensus       131 ---G~C~C~~g~~G--~~Cd  145 (162)
T 1klo_A          131 ---GQCQCLPHVSG--RDCG  145 (162)
T ss_dssp             ---CCCCBCTTEES--TTCC
T ss_pred             ---CEeECCCCCcC--CCCC
Confidence               46999999998  4554

>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A

Probab=97.72  E-value=2.9e-05  Score=45.38  Aligned_cols=40  Identities=23%  Similarity=0.695  Sum_probs=28.7

Q ss_pred             cCCCCCC-CCCCCCCCCeeeeCC-CCeeEeecCCCCccCCCcccc
Q psy5752         124 PLKSCLE-DRSLCGKDASCVVAS-QGHFHCECNEGFTGNGITCKP  166 (222)
Q Consensus       124 ~id~C~~-~~~~C~~~~~C~n~~-~g~~~C~C~~G~~gd~~~C~~  166 (222)
                      +|++|.. ...+|.+ ++|++.. .++|.|.|++||+|  .+|+.
T Consensus         2 ~i~~C~~~~~~pC~n-G~C~~~~~~~~~~C~C~~GytG--~~Ce~   43 (46)
T 1k36_A            2 SITKCSSDMNGYCLH-GQCIYLVDMSQNYCRCEVGYTG--VRCEH   43 (46)
T ss_dssp             CEECCCTTCCSSCSS-EEEEEETTTTEEEEEECTTCSS--TTSCC
T ss_pred             ccccCCCCCCCCCCC-CEeeccCCCCCEEEECCCCCcc--CCCCc
Confidence            4677865 1134988 7999753 24599999999998  66764

>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...

Probab=97.69  E-value=2.6e-05  Score=47.41  Aligned_cols=41  Identities=29%  Similarity=0.695  Sum_probs=29.7

Q ss_pred             CCCC-CCCCCCCCEeeecCCCCCeEEecCCCCc--cCCCeeecCCCcC
Q psy5752          58 GCNV-VKNCHANAECVYNATSAGYRCQCAQGYV--GNGVECHPLKSCL  102 (222)
Q Consensus        58 ~C~~-~~~C~~~~~C~~~n~~g~~~C~C~~G~~--~~~~~C~~~~~C~  102 (222)
                      ||.. ...|.  +.|+  |++|+|+|.|++||.  .++.+|.++++|.
T Consensus         3 EC~~~~~~C~--~~C~--nt~Gsy~C~C~~Gy~L~~d~~~C~didec~   46 (55)
T 2jkh_L            3 LCSLDNGDCD--QFCH--EEQNSVVCSCARGYTLADNGKACIPTGPYP   46 (55)
T ss_dssp             CTTTGGGGCS--SEEE--EETTEEEEECCTTEEECTTSSCEEESSSSC
T ss_pred             cccCCCCCcC--cEeE--cCCCCeEEeCCCCCEECCCCCeeccCcccc
Confidence            3654 35674  4896  999999999999998  4556666666553

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=97.66  E-value=6.4e-06  Score=71.88  Aligned_cols=80  Identities=24%  Similarity=0.618  Sum_probs=35.2

Q ss_pred             eeecCCCCccCCCCCcccCCCCCCCCCCCCCCCEeeecCCCCCeEEecCCCCccCCCeeecCCCcCCCCCCCCCCCCCcc
Q psy5752          37 KCICNFGYTGDGVTECNPESLGCNVVKNCHANAECVYNATSAGYRCQCAQGYVGNGVECHPLKSCLEDRSLCGKDSQGYV  116 (222)
Q Consensus        37 ~C~C~~G~~g~~~~~C~~~~~~C~~~~~C~~~~~C~~~n~~g~~~C~C~~G~~~~~~~C~~~~~C~~~~~~C~~c~~g~~  116 (222)
                      .+.|..+|.|.   .|+..  +|..  +|.+ +.|+  +   .++|.|.+||+|..                        
T Consensus       378 p~~C~~~~~g~---~c~~~--~C~~--~C~n-G~C~--~---~~~C~C~~G~~G~~------------------------  420 (463)
T 2wg3_C          378 PEECRATVQPA---QTLTS--ECSR--LCRN-GYCT--P---TGKCCCSPGWEGDF------------------------  420 (463)
T ss_dssp             CGGGCCCCCCC---CCCCC--HHHH--HCCS-EEEC--T---TSCEEECTTEESTT------------------------
T ss_pred             cccCCCCCcCC---CCccc--cccC--CCCC-CccC--C---CCeECCCCCcCCCc------------------------
Confidence            57888899988   77643  3864  5886 7995  3   24899999998873                        


Q ss_pred             cCCCccccCCCCCCCCCCCCCCCeeeeCCCCeeEeecCCCCccCCCccccCC
Q psy5752         117 GNGVECHPLKSCLEDRSLCGKDASCVVASQGHFHCECNEGFTGNGITCKPVR  168 (222)
Q Consensus       117 ~~g~~C~~id~C~~~~~~C~~~~~C~n~~~g~~~C~C~~G~~gd~~~C~~~~  168 (222)
                           |+ +++|..   .|.++++|++.    ++|.|++||+|  ..|+..+
T Consensus       421 -----C~-~~~C~~---~C~~~g~C~~~----~~C~C~~G~~G--~~C~~~~  457 (463)
T 2wg3_C          421 -----CR-TAKCEP---ACRHGGVCVRP----NKCLCKKGYLG--PQCEQVD  457 (463)
T ss_dssp             -----SC-EECC----------------------------------------
T ss_pred             -----CC-cCcCCC---CCCCCCEECCC----CEEECCCCccc--CCCCCCc
Confidence                 32 456754   49888899864    68999999998  6776543

>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A

Probab=97.64  E-value=1.1e-05  Score=65.44  Aligned_cols=43  Identities=33%  Similarity=0.752  Sum_probs=37.5

Q ss_pred             CCCC-CCCCCCCCEeeecCCCCCeEEecCCCCccCCCeeecCCCcC
Q psy5752          58 GCNV-VKNCHANAECVYNATSAGYRCQCAQGYVGNGVECHPLKSCL  102 (222)
Q Consensus        58 ~C~~-~~~C~~~~~C~~~n~~g~~~C~C~~G~~~~~~~C~~~~~C~  102 (222)
                      ||.. .+.|..++.|+  |+.|+|.|.|++||.|++..|.++++..
T Consensus         7 EC~~~~~~C~~~a~C~--Nt~Gsy~C~C~~Gy~GnG~~C~d~d~Pq   50 (285)
T 1gl4_A            7 TCANNRHQCSVHAECR--DYATGFCCRCVANYTGNGRQCVAEGSPQ   50 (285)
T ss_dssp             CHHHHGGGSCTTEEEE--ECSSCEEEEECTTEEECSSSEEETTCEE
T ss_pred             hccCCCCCCCCCCEeE--cCCCCeEEEcCCCCCCCCCcCCCCCCCc
Confidence            4864 48899899997  9999999999999999999999887644

>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}

Probab=97.63  E-value=2.5e-05  Score=69.14  Aligned_cols=100  Identities=17%  Similarity=0.349  Sum_probs=30.6

Q ss_pred             ee-ecCCCCccCCCCCcccCCCCCCCCCCCCCCCEeeecCC----CCCeEEecCCCCccCCCeeecCCCcCCCCCCCCCC
Q psy5752          37 KC-ICNFGYTGDGVTECNPESLGCNVVKNCHANAECVYNAT----SAGYRCQCAQGYVGNGVECHPLKSCLEDRSLCGKD  111 (222)
Q Consensus        37 ~C-~C~~G~~g~~~~~C~~~~~~C~~~~~C~~~~~C~~~n~----~g~~~C~C~~G~~~~~~~C~~~~~C~~~~~~C~~c  111 (222)
                      .| +|.+||.|.   .|+.... |.. ..|...+.|.  +.    ...++|.|++||.|..+               ..|
T Consensus       419 ~C~~C~~Gy~G~---~c~~~~~-C~~-C~C~~~gtc~--~~~~Cd~~tg~C~C~~g~~G~~C---------------e~C  476 (525)
T 4aqs_A          419 RCDVCKEGFYDL---SAEDPYG-CKS-CACNPLGTIP--GGNPCDSETGYCYCKRLVTGQRC---------------DQC  476 (525)
T ss_dssp             TTCEECTTEECC---CTTSTTS-SEE-CCCCTTTBCC--SSCCBCTTTCCBCBCTTCCSTTT---------------CC-
T ss_pred             cccCCCCCCcCC---CCCCCCC-Ccc-CCCCCCceec--CCCcccCCCCEEECCCCCcCCCc---------------ccC
Confidence            34 567777665   5554442 654 5555555552  21    23568999999988754               235


Q ss_pred             CCCcccCCCccccCCCCCCCCCCCCCCCeeeeCC-CCeeEeecCCCCccCCCccc
Q psy5752         112 SQGYVGNGVECHPLKSCLEDRSLCGKDASCVVAS-QGHFHCECNEGFTGNGITCK  165 (222)
Q Consensus       112 ~~g~~~~g~~C~~id~C~~~~~~C~~~~~C~n~~-~g~~~C~C~~G~~gd~~~C~  165 (222)
                      ..||.+..   .+++.|...+  |.+++.+.+.- ..+++|.|++||+|  .+|+
T Consensus       477 ~~G~~g~~---~~~~~C~~C~--C~~~gs~~~~C~~~tG~C~C~~G~~G--~~Ce  524 (525)
T 4aqs_A          477 LPQHWGLS---NDLDGCRPCD--CDLGGALNNSCSEDSGQCSCLPHMIG--RQCN  524 (525)
T ss_dssp             -------------------------------------------------------
T ss_pred             CCCccCCC---CCCCCCcCCC--CCCCCccCCccCCCCCeeECCCCCcC--CCCC
Confidence            55665431   2455665433  66555544321 12257999999998  5554

>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D

Probab=97.62  E-value=5.5e-06  Score=49.85  Aligned_cols=43  Identities=28%  Similarity=0.609  Sum_probs=32.2

Q ss_pred             eeeecCCCCccCCCCCcccCCCCCCCCCCCCCCCEeeec--CCCCCeEEecCCCCccCCCe
Q psy5752          36 AKCICNFGYTGDGVTECNPESLGCNVVKNCHANAECVYN--ATSAGYRCQCAQGYVGNGVE   94 (222)
Q Consensus        36 ~~C~C~~G~~g~~~~~C~~~~~~C~~~~~C~~~~~C~~~--n~~g~~~C~C~~G~~~~~~~   94 (222)
                      +.|.|++||+               + .+|.++++|+..  ...++|.|.|++||+|..++
T Consensus         3 ~~C~C~~g~~---------------~-~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~Ce   47 (52)
T 3ca7_A            3 PTYKCPETFD---------------A-WYCLNDAHCFAVKIADLPVYSCECAIGFMGQRCE   47 (52)
T ss_dssp             CCBCCCHHHH---------------H-HTSCTTCEEEEEEETTEEEEEEECCTTEESTTSC
T ss_pred             eeeECCCCCc---------------C-CcCCCCCEEecCccCCCCCEEEECCCCCcCCCCc
Confidence            4788988886               1 577789999610  14568999999999988553

>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4

Probab=97.61  E-value=0.00011  Score=50.04  Aligned_cols=71  Identities=27%  Similarity=0.573  Sum_probs=56.3

Q ss_pred             CC-CCCCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCcccCCCCCCC-CCCCCCCCEeeecCCCCCeEEecCCCCc
Q psy5752          12 EC-DTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPESLGCNV-VKNCHANAECVYNATSAGYRCQCAQGYV   89 (222)
Q Consensus        12 ~C-~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~~~~~C~~-~~~C~~~~~C~~~n~~g~~~C~C~~G~~   89 (222)
                      -| ...|..++.|....    +|.. .|+|..||.+++. .|..++..|.. ...|..+|.|. ...+....|.|..+|.
T Consensus        12 ~C~~t~Cp~NA~C~r~~----~G~e-~CrCl~gY~~dg~-~Cv~~Np~C~~nNGGCd~nAeC~-~~~~~ki~C~C~~~~~   84 (105)
T 1n1i_A           12 KCIDTNVPENAACYRYL----DGTE-EWRCLLGFKEVGG-KCVPASITCEENNGGCAPEAECT-MDDKKEVECKCTKEGS   84 (105)
T ss_dssp             SCCSSCCCTTEEEEECT----TSCE-EEEECTTEEECSS-SEEECCCCTTSGGGGSCTTSEEE-ECTTSCEEEECCSTTC
T ss_pred             EecCCCCCCCCCeEECC----CCCE-eEEEECCeeccCC-EEEECCcchhhcCCCcCCCcEeE-ECCCCEEEeECCCCCC
Confidence            46 55788899999852    6776 9999999999887 89887533765 56799999997 3445788999999985

>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*

Probab=97.60  E-value=4.8e-05  Score=46.94  Aligned_cols=40  Identities=25%  Similarity=0.684  Sum_probs=30.9

Q ss_pred             CCCCCCCCCCCCeeeeCCCCeeEeecCCCCc--cCCCccccCCC
Q psy5752         128 CLEDRSLCGKDASCVVASQGHFHCECNEGFT--GNGITCKPVRK  169 (222)
Q Consensus       128 C~~~~~~C~~~~~C~n~~~g~~~C~C~~G~~--gd~~~C~~~~~  169 (222)
                      |+...+.|.+  .|+|+++|+|.|.|++||.  .|+++|.++++
T Consensus         2 C~~~nggC~~--~C~n~~~gs~~C~C~~Gy~L~~D~~tC~d~~~   43 (59)
T 2wph_E            2 CNIKNGRCEQ--FCKNSADNKVVCSCTEGYRLAENQKSCEPAVP   43 (59)
T ss_dssp             TTTGGGGCSS--EEEECSTTCEEEECCTTEEECTTSSCEEESSS
T ss_pred             CcCCCCCcCC--EeEeCCCCCEEeeCCCCcEECCCCCcccCCCC
Confidence            4444556865  7999975469999999998  57889998764

>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}

Probab=97.59  E-value=2.5e-05  Score=50.16  Aligned_cols=34  Identities=18%  Similarity=0.457  Sum_probs=26.9

Q ss_pred             cCCCCC---CCCCCCCCeecCCCCCCCCCCceeee-cCCCCccC
Q psy5752           8 FSLSEC---DTPCHPNAQCTSPDEFNESREQAKCI-CNFGYTGD   47 (222)
Q Consensus         8 ~~~~~C---~~~C~~~~~C~~~~~~~~~g~~~~C~-C~~G~~g~   47 (222)
                      .|||||   .++|.++++|+|  +   .|+| .|. +..||.++
T Consensus         1 ~DidEC~~~~~~C~~~~~C~N--t---~Gsy-~C~~~~~g~~~~   38 (71)
T 2kl7_A            1 SDVNECLTIPEACKGEMKCIN--H---YGGY-LCLPRSAAVIND   38 (71)
T ss_dssp             CCSCCTTCCCCSCTTEEEEEE--T---TCCE-EEEETTSCCCSC
T ss_pred             CccccccCCCCCCCCCCEeEC--C---CCCe-EecccCCccccc
Confidence            379999   368998899999  4   7888 997 45788754

>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1

Probab=97.57  E-value=7.5e-05  Score=43.31  Aligned_cols=29  Identities=21%  Similarity=0.673  Sum_probs=23.8

Q ss_pred             CCCCCCeee--eCCCCeeEeecCCCCccCCCccc
Q psy5752         134 LCGKDASCV--VASQGHFHCECNEGFTGNGITCK  165 (222)
Q Consensus       134 ~C~~~~~C~--n~~~g~~~C~C~~G~~gd~~~C~  165 (222)
                      +|.++++|+  +.. ++|+|.|++||+|  ..|+
T Consensus        10 pC~ngg~C~~~~~~-~~~~C~C~~G~~G--~~Ce   40 (45)
T 1a3p_A           10 YCLNGGVXMHIESL-DSYTCNCVIGYSG--DRCQ   40 (45)
T ss_dssp             CCSSSCEEEECTTT-SSEEEECCTTEET--TTTC
T ss_pred             CCCCCCEEEeecCC-CCEEEEcCCCCcC--CcCC
Confidence            499999998  554 5599999999998  6675

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=97.54  E-value=0.00011  Score=61.42  Aligned_cols=60  Identities=22%  Similarity=0.586  Sum_probs=38.4

Q ss_pred             CCCCCCCCCCCCCCCeeeeCCCCeeEeecCCCCc--cCCCccccCCCCCCCeeeecCCcEEEEcCCCC
Q psy5752         125 LKSCLEDRSLCGKDASCVVASQGHFHCECNEGFT--GNGITCKPVRKKESDFLLVNQGMFMLRVPYQP  190 (222)
Q Consensus       125 id~C~~~~~~C~~~~~C~n~~~g~~~C~C~~G~~--gd~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~  190 (222)
                      ||||+ .++.|.+  .|+|++ |+|+|.|++||.  .|+++|.....  ..+.+.+....+....+..
T Consensus         1 i~ec~-~~~~C~~--~C~n~~-g~~~C~C~~g~~l~~d~~~C~~~~~--~~~ll~~~~~~I~~i~~~g   62 (349)
T 3v64_C            1 VNECA-EEGYCSQ--GCTNSE-GAFQCWCEAGYELRPDRRSCKALGP--EPVLLFANRIDIRQVLPHR   62 (349)
T ss_dssp             ---------CCSS--EECCC----CCEECCTTEEECTTSSCEEESSS--CCEEEEECBSCEEEECTTS
T ss_pred             CcccC-CCCCCcC--eeecCC-CCeEEECCCCccCCCCCCccccccc--CceeEeecccceEEEeCCC
Confidence            57887 5677976  899997 569999999999  47789998765  5677777777666665544

>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A

Probab=97.52  E-value=4.4e-05  Score=47.70  Aligned_cols=41  Identities=27%  Similarity=0.643  Sum_probs=30.8

Q ss_pred             CCCCCCCCCCCCCCCeeee-----CCCCeeEeecCCCCccCCCccc-cCCCC
Q psy5752         125 LKSCLEDRSLCGKDASCVV-----ASQGHFHCECNEGFTGNGITCK-PVRKK  170 (222)
Q Consensus       125 id~C~~~~~~C~~~~~C~n-----~~~g~~~C~C~~G~~gd~~~C~-~~~~~  170 (222)
                      .++|..+|  |.++++|++     .. ++|.|.|++||+|  ..|+ +++.+
T Consensus         6 c~~C~~~p--C~ngG~C~~~~~~~~~-~~y~C~C~~Gf~G--~~Ce~~i~~~   52 (63)
T 1hae_A            6 CAEKEKTF--CVNGGECFMVKDLSNP-SRYLCKCQPGFTG--ARCTENVPMK   52 (63)
T ss_dssp             CCHHHHTT--SCTTCEEEEEESSSSS-CCEEEECCTTEES--TTSCEECCSS
T ss_pred             cCCCCCCc--CCCCcEEecCCccCCC-CCEEEECCCCCcC--CccCcCcCcc
Confidence            35676555  999999997     43 4599999999998  7786 45544

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=97.49  E-value=1.2e-05  Score=70.06  Aligned_cols=62  Identities=35%  Similarity=0.904  Sum_probs=25.9

Q ss_pred             CCCCCCCCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCcccCCCCCCCCCCCCCCCEeeecCCCCCeEEecCCCCc
Q psy5752          10 LSECDTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPESLGCNVVKNCHANAECVYNATSAGYRCQCAQGYV   89 (222)
Q Consensus        10 ~~~C~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~~~~~C~~~~~C~~~~~C~~~n~~g~~~C~C~~G~~   89 (222)
                      +++|..+|.| ++|++.        + .|.|.+||+|.   .|+..  +|..  +|.++++|+  +.   +.|.|.+||+
T Consensus       392 ~~~C~~~C~n-G~C~~~--------~-~C~C~~G~~G~---~C~~~--~C~~--~C~~~g~C~--~~---~~C~C~~G~~  449 (463)
T 2wg3_C          392 TSECSRLCRN-GYCTPT--------G-KCCCSPGWEGD---FCRTA--KCEP--ACRHGGVCV--RP---NKCLCKKGYL  449 (463)
T ss_dssp             CCHHHHHCCS-EEECTT--------S-CEEECTTEEST---TSCEE--CC------------------------------
T ss_pred             cccccCCCCC-CccCCC--------C-eECCCCCcCCC---cCCcC--cCCC--CCCCCCEEC--CC---CEEECCCCcc
Confidence            4566336886 899872        2 79999999999   99643  4874  899999995  33   6999999999


Q ss_pred             cCCC
Q psy5752          90 GNGV   93 (222)
Q Consensus        90 ~~~~   93 (222)
                      |..+
T Consensus       450 G~~C  453 (463)
T 2wg3_C          450 GPQC  453 (463)
T ss_dssp             ----
T ss_pred             cCCC
Confidence            8744

>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*

Probab=97.40  E-value=3.4e-05  Score=46.52  Aligned_cols=35  Identities=26%  Similarity=0.639  Sum_probs=27.3

Q ss_pred             CCCCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCcccC
Q psy5752          14 DTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPE   55 (222)
Q Consensus        14 ~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~~   55 (222)
                      ++||.|+|+|+....   .++| .|.|++||+|.   .|+..
T Consensus        11 ~~pC~nGG~C~~~~~---~~~~-~C~C~~GytG~---~Ce~~   45 (53)
T 1nql_B           11 DGYCLHDGVCMYIEA---LDKY-ACNCVVGYIGE---RCQYR   45 (53)
T ss_dssp             CCEECTTCEEEEETT---TTEE-EEEECTTEEST---TSCEE
T ss_pred             CCCCCCCeEEeeecC---CCCE-EEecCCCCcCC---CCCcC
Confidence            579999999982112   5566 99999999999   88754

>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1

Probab=97.22  E-value=9.4e-05  Score=44.15  Aligned_cols=35  Identities=29%  Similarity=0.712  Sum_probs=26.1

Q ss_pred             CCCCCCCEeeecCCCCCeEEecCCCCc--cCCCeeecCCCc
Q psy5752          63 KNCHANAECVYNATSAGYRCQCAQGYV--GNGVECHPLKSC  101 (222)
Q Consensus        63 ~~C~~~~~C~~~n~~g~~~C~C~~G~~--~~~~~C~~~~~C  101 (222)
                      ..|.  +.|+  |++++|+|.|++||.  .++.+|.+++++
T Consensus         6 g~C~--~~C~--n~~gs~~C~C~~Gy~L~~d~~tC~dide~   42 (51)
T 1kig_L            6 GGCD--QFCR--EERSEVRCSCAHGYVLGDDSKSCVSTERF   42 (51)
T ss_dssp             TSSS--SCCC--EETTEECCCCCTTEEECTTSSCEEECSSS
T ss_pred             CCcC--CEeE--cCCCCeEEeCCCCcEECCCCCccccCCcc
Confidence            4564  3686  899999999999998  556666666554

>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*

Probab=97.22  E-value=0.00022  Score=45.36  Aligned_cols=41  Identities=27%  Similarity=0.670  Sum_probs=29.4

Q ss_pred             CCCC-CCCCCCCCEeeecCCCC-CeEEecCCCCc--cCCCeeecCCCcC
Q psy5752          58 GCNV-VKNCHANAECVYNATSA-GYRCQCAQGYV--GNGVECHPLKSCL  102 (222)
Q Consensus        58 ~C~~-~~~C~~~~~C~~~n~~g-~~~C~C~~G~~--~~~~~C~~~~~C~  102 (222)
                      +|.. ...|.  ..|+  |+++ +|.|.|.+||.  .++.+|.++++|.
T Consensus         7 eC~~~nggC~--h~C~--n~~g~s~~C~C~~Gy~L~~D~~tC~d~dec~   51 (69)
T 1kli_L            7 ICVNENGGCE--QYCS--DHTGTKRSCRCHEGYSLLADGVSCTPTVEYP   51 (69)
T ss_dssp             CTTSGGGGCS--SEEE--EETTTEEEEECCTTEEECTTSSCEEECSSSC
T ss_pred             cccCCCCCcC--CEeE--cCCCCCEEEeCCCCCeECCCCCcccCccccc
Confidence            4765 35674  4896  8888 89999999998  4566666666553

>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1

Probab=97.05  E-value=0.00038  Score=41.56  Aligned_cols=37  Identities=27%  Similarity=0.632  Sum_probs=28.0

Q ss_pred             cCCCCC-C----------CCCCCCCeecCCCCCCCCCCceeeecCCCCccC--CCCCcc
Q psy5752           8 FSLSEC-D----------TPCHPNAQCTSPDEFNESREQAKCICNFGYTGD--GVTECN   53 (222)
Q Consensus         8 ~~~~~C-~----------~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~--~~~~C~   53 (222)
                      .||||| .          .+|.+  .|+|  +   .|+| .|.|++||++.  ++ .|.
T Consensus         2 ~DidEC~~~~~~~~~~~~~~C~~--~C~n--~---~Gsy-~C~C~~Gy~~~~d~~-~C~   51 (53)
T 1apq_A            2 VDLDECASRSKSGEEDPQPQCQH--LCHN--Y---VGGY-FCSCRPGYELQEDRH-SCQ   51 (53)
T ss_dssp             CSCCTTTCSTTTCCCSSSCTTSS--EEEE--E---TTEE-EEECSTTCEECTTSS-CEE
T ss_pred             CccccccCcccccccccCCCCCC--EeEC--C---CCCe-EEECCCCCeECCCCC-ccC
Confidence            588999 4          57863  9999  4   7787 99999999853  33 564

>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*

Probab=97.03  E-value=0.00032  Score=42.11  Aligned_cols=35  Identities=29%  Similarity=0.803  Sum_probs=25.8

Q ss_pred             CCCCCCCEeeecCCCC-CeEEecCCCCc--cCCCeeecCCCc
Q psy5752          63 KNCHANAECVYNATSA-GYRCQCAQGYV--GNGVECHPLKSC  101 (222)
Q Consensus        63 ~~C~~~~~C~~~n~~g-~~~C~C~~G~~--~~~~~C~~~~~C  101 (222)
                      ..|.  ..|+  |+.+ +|+|.|.+||.  .++.+|+++++|
T Consensus         7 ggC~--~~C~--n~~ggs~~C~C~~Gy~L~~Dg~tC~d~dec   44 (53)
T 2bz6_L            7 GGCE--QYCS--DHTGTKRSCRCHEGYSLLADGVSCTPTVEY   44 (53)
T ss_dssp             GGCS--SEEE--EETTTEEEEECCTTEEECTTSSCEEECSSS
T ss_pred             CCcC--CEeE--cCCCCCEEeeCCCCCEECCCCCcccCCccc
Confidence            4563  4796  8888 79999999998  456666666655

>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D

Probab=96.85  E-value=0.00018  Score=43.01  Aligned_cols=34  Identities=24%  Similarity=0.625  Sum_probs=26.1

Q ss_pred             CCCCCCCeecCCC--CCCCCCCceeeecCCCCccCCCCCcccC
Q psy5752          15 TPCHPNAQCTSPD--EFNESREQAKCICNFGYTGDGVTECNPE   55 (222)
Q Consensus        15 ~~C~~~~~C~~~~--~~~~~g~~~~C~C~~G~~g~~~~~C~~~   55 (222)
                      +||.|+|+|++..  .   .+.| .|.|++||+|.   .|+..
T Consensus        14 ~pC~NGGtC~~~~~~~---~~~y-~C~C~~Gf~G~---~Ce~~   49 (52)
T 3ca7_A           14 WYCLNDAHCFAVKIAD---LPVY-SCECAIGFMGQ---RCEYK   49 (52)
T ss_dssp             HTSCTTCEEEEEEETT---EEEE-EEECCTTEEST---TSCEE
T ss_pred             CcCCCCCEEecCccCC---CCCE-EEECCCCCcCC---CCccc
Confidence            5899999999520  1   3455 99999999999   88743

>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=96.80  E-value=0.001  Score=49.82  Aligned_cols=51  Identities=24%  Similarity=0.571  Sum_probs=37.9

Q ss_pred             CCcccCCCccccCCCCCCCCCC---CCCCCeeeeCCCCeeEeecCCCCc--cCCCccccC
Q psy5752         113 QGYVGNGVECHPLKSCLEDRSL---CGKDASCVVASQGHFHCECNEGFT--GNGITCKPV  167 (222)
Q Consensus       113 ~g~~~~g~~C~~id~C~~~~~~---C~~~~~C~n~~~g~~~C~C~~G~~--gd~~~C~~~  167 (222)
                      .||... ..+.++++|...++.   |.+  .|+|+. |+|.|.|++||.  +|+.+|.++
T Consensus       113 ~Gf~~~-~~~~di~eC~~~~~~~~~C~~--~C~n~~-g~~~C~C~~Gy~l~~d~~~C~~~  168 (170)
T 1szb_A          113 TGFEAF-YAAEDIDECQVAPGEAPTCDH--HCHNHL-GGFYCSCRAGYVLHRNKRTCSEQ  168 (170)
T ss_dssp             CEEEEE-EEEEECCTTCCCTTSCCSSSS--EEEEET-TEEEEECCTTEEECTTSSCEEEC
T ss_pred             cCceee-eeccccCcccCCCCCCCccCC--ccccCC-CCEEEeCCCCcEECCCCCccccc
Confidence            566532 245688999876544   865  799997 559999999998  577888765

>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A

Probab=96.74  E-value=0.0006  Score=50.50  Aligned_cols=45  Identities=31%  Similarity=0.784  Sum_probs=34.0

Q ss_pred             ccccCCCCCCCCCCCCCCCeeeeCCCCeeEeecCCCCccCCCccccCCCCC
Q psy5752         121 ECHPLKSCLEDRSLCGKDASCVVASQGHFHCECNEGFTGNGITCKPVRKKE  171 (222)
Q Consensus       121 ~C~~id~C~~~~~~C~~~~~C~n~~~g~~~C~C~~G~~gd~~~C~~~~~~~  171 (222)
                      .|+ .++|...+  |.++++|++..++ |+|.|++||.|  ..|+.+++|.
T Consensus       116 ICe-~~~c~~~~--C~~~g~C~~~~~~-~~c~C~~g~~G--~~Ce~~~~c~  160 (162)
T 1g1s_A          116 LCY-TASCQDMS--CSKQGECLETIGN-YTCSCYPGFYG--PECEYVRDDD  160 (162)
T ss_dssp             EEE-ECCCCTTG--GGGSEEEEECSSS-EEEEECTTEES--TTSCEECC--
T ss_pred             EEE-eCCCcCCC--CCCCCEEecCCCC-ceEeCCCCCcC--cccccCcccC
Confidence            344 35676544  9888999999754 99999999998  6899887764

>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A

Probab=96.72  E-value=0.00064  Score=53.17  Aligned_cols=61  Identities=21%  Similarity=0.698  Sum_probs=46.1

Q ss_pred             CCCCCCCCeecCCCCCCCCCCceeeecCCC------CccCCCCCcccCCCCCCC--CCCCCCC--CEeeecCCCCCeEEe
Q psy5752          14 DTPCHPNAQCTSPDEFNESREQAKCICNFG------YTGDGVTECNPESLGCNV--VKNCHAN--AECVYNATSAGYRCQ   83 (222)
Q Consensus        14 ~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G------~~g~~~~~C~~~~~~C~~--~~~C~~~--~~C~~~n~~g~~~C~   83 (222)
                      ..+|.++|+|+.  .        .|.|.+|      |+|.   .|+.....|..  ..+|..+  ++|.  .    ..|.
T Consensus       142 ~~~Csg~G~C~~--g--------~C~C~~gw~~~~~~~G~---~Ce~~~~~C~~~~g~~C~~~~~G~C~--~----g~C~  202 (217)
T 2p28_B          142 SIICSGLGDCVC--G--------QCLCHTSDVPGKLIYGQ---YCECDTINCERYNGQVCGGPGRGLCF--C----GKCR  202 (217)
T ss_dssp             SCBGGGTEEEET--T--------EEEECCCCSTTCCEEST---TSCEESSCSCEETTEETTCTTTEEEE--T----TEEE
T ss_pred             CCCCCCCCEEeC--C--------ceECCCCCCCcccEECC---CcccCCccCCCCCCCCCCCCCCcEEe--C----CeeE
Confidence            367888999986  2        7999999      5787   89843335875  1268877  8995  3    2899


Q ss_pred             cCCCCccCCC
Q psy5752          84 CAQGYVGNGV   93 (222)
Q Consensus        84 C~~G~~~~~~   93 (222)
                      |.+||+|..+
T Consensus       203 C~~G~~G~~C  212 (217)
T 2p28_B          203 CHPGFEGSAC  212 (217)
T ss_dssp             ECTTEESTTS
T ss_pred             CCCCCccCCc
Confidence            9999998855

>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A

Probab=96.66  E-value=0.0013  Score=46.58  Aligned_cols=58  Identities=21%  Similarity=0.456  Sum_probs=37.6

Q ss_pred             CCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCcccCCCCCCCCCCCCCCCEeeecCCCCCeEEecCCCCccC
Q psy5752          16 PCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPESLGCNVVKNCHANAECVYNATSAGYRCQCAQGYVGN   91 (222)
Q Consensus        16 ~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~~~~~C~~~~~C~~~~~C~~~n~~g~~~C~C~~G~~~~   91 (222)
                      ||.|+++|++...   ...++.|.|++||+|.   .|+....     ..      |. .....+|++.+..++.|.
T Consensus         2 pC~nggtC~~~~~---~~~~~~C~Cp~g~~G~---~Ce~~~~-----~~------C~-~g~G~~YrG~~~~t~sG~   59 (122)
T 2fd6_A            2 DCLNGGTCVSNKY---FSNIHWCNCPKKFGGQ---HCEIDKS-----KT------CY-EGNGHFYRGKASTDTMGR   59 (122)
T ss_dssp             CCCSSCEEEECTT---TTTCEEEECCTTEEST---TSCEESS-----CC------SB-CSSCTTCCSCCCBBTTSC
T ss_pred             CCCCcCCcCCCcc---cCCCCCccCCCCCCCc---cccccCc-----CC------Cc-ccccccceeeccccccCC
Confidence            7999999987421   1344489999999999   8986442     12      32 122346777777666554

>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A

Probab=96.57  E-value=0.00069  Score=50.14  Aligned_cols=45  Identities=29%  Similarity=0.756  Sum_probs=33.0

Q ss_pred             CcccCCCCCCCCCCCCCCCEeeecCCCCCeEEecCCCCccCCCeeecCCCcC
Q psy5752          51 ECNPESLGCNVVKNCHANAECVYNATSAGYRCQCAQGYVGNGVECHPLKSCL  102 (222)
Q Consensus        51 ~C~~~~~~C~~~~~C~~~~~C~~~n~~g~~~C~C~~G~~~~~~~C~~~~~C~  102 (222)
                      .|+..  +|.. .+|.+++.|+  +..++|+|+|++||.|.  .|+.+++|.
T Consensus       116 ICe~~--~c~~-~~C~~~g~C~--~~~~~~~c~C~~g~~G~--~Ce~~~~c~  160 (162)
T 1g1s_A          116 LCYTA--SCQD-MSCSKQGECL--ETIGNYTCSCYPGFYGP--ECEYVRDDD  160 (162)
T ss_dssp             EEEEC--CCCT-TGGGGSEEEE--ECSSSEEEEECTTEEST--TSCEECC--
T ss_pred             EEEeC--CCcC-CCCCCCCEEe--cCCCCceEeCCCCCcCc--ccccCcccC
Confidence            45543  3776 8899899997  88999999999999986  345544443

>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*

Probab=96.55  E-value=0.0012  Score=39.51  Aligned_cols=31  Identities=29%  Similarity=0.788  Sum_probs=24.7

Q ss_pred             CCCCCCCeee--eCCCCeeEeecCCCCccCCCcccc
Q psy5752         133 SLCGKDASCV--VASQGHFHCECNEGFTGNGITCKP  166 (222)
Q Consensus       133 ~~C~~~~~C~--n~~~g~~~C~C~~G~~gd~~~C~~  166 (222)
                      .+|.++++|+  +.. ++|.|.|++||+|  ..|+.
T Consensus        12 ~pC~nGG~C~~~~~~-~~~~C~C~~GytG--~~Ce~   44 (53)
T 1nql_B           12 GYCLHDGVCMYIEAL-DKYACNCVVGYIG--ERCQY   44 (53)
T ss_dssp             CEECTTCEEEEETTT-TEEEEEECTTEES--TTSCE
T ss_pred             CCCCCCeEEeeecCC-CCEEEecCCCCcC--CCCCc
Confidence            4598899998  444 5699999999999  67763

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=96.53  E-value=0.0051  Score=55.55  Aligned_cols=83  Identities=19%  Similarity=0.422  Sum_probs=56.8

Q ss_pred             cCCCCCCCCCCCCCCCeeeeCCCCeeEeecCCCCc--cCCCccccCCCCCCCeeeecCCcEEEEcCCCCCCCCCCC-cee
Q psy5752         124 PLKSCLEDRSLCGKDASCVVASQGHFHCECNEGFT--GNGITCKPVRKKESDFLLVNQGMFMLRVPYQPTRTDRGR-PII  200 (222)
Q Consensus       124 ~id~C~~~~~~C~~~~~C~n~~~g~~~C~C~~G~~--gd~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~  200 (222)
                      .+++|+...+.|.+  .|.+.+.++|+|.|++||.  .|+++|...    ..+++.+....+....+....  ... .+.
T Consensus       264 ~~n~C~~~ng~C~~--~C~~~~~~~~~C~C~~g~~l~~d~~~C~~~----~~~Ll~s~~~~i~~i~l~~~~--~~~~~l~  335 (628)
T 4a0p_A          264 GWNECASSNGHCSH--LCLAVPVGGFVCGCPAHYSLNADNRTCSAP----TTFLLFSQKSAINRMVIDEQQ--SPDIILP  335 (628)
T ss_dssp             CCCTTTTTGGGCSS--EEEEETTTEEEEECSTTCEECTTSSCEECC----SSEEEEEETTEEEEECCCTTC--CCCEECC
T ss_pred             cceEeccCCCCcch--hhhcCCCCCeeEEcCCCcEecccCCcCccc----cceeeeeccceEEEEeccccc--CceEEEE
Confidence            46899876677965  8999975679999999998  477889863    457888888877776654331  111 122


Q ss_pred             ecCCceeeeeecCC
Q psy5752         201 NHPNQMLIGLCLSP  214 (222)
Q Consensus       201 ~~~~~~~~~~~~~~  214 (222)
                      +.....+++|+||.
T Consensus       336 ~~~~~~~~~ld~d~  349 (628)
T 4a0p_A          336 IHSLRNVRAIDYDP  349 (628)
T ss_dssp             CTTCSCEEEEEEET
T ss_pred             ehhcCCceEEEEec
Confidence            23335577777764

>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}

Probab=96.48  E-value=0.00063  Score=41.63  Aligned_cols=36  Identities=22%  Similarity=0.597  Sum_probs=25.9

Q ss_pred             CCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCcccCC
Q psy5752          16 PCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPES   56 (222)
Q Consensus        16 ~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~~~   56 (222)
                      +|.|+|+|+.... ...+.| .|.|++||+|.   .|+..+
T Consensus        15 pC~NGGtC~~~~~-~~~~~~-~C~C~~Gf~G~---~Ce~~~   50 (58)
T 3ltf_D           15 YCLNDAHCFAVKI-ADLPVY-SCECAIGFMGQ---RCEYKE   50 (58)
T ss_dssp             TSCSSCEEEEEEE-TTEEEE-EEEECTTEESS---SSCEEC
T ss_pred             cCCCCCEEeCCcc-CCCCCE-EeECCCCCccC---CCcccC
Confidence            8999999983100 003455 99999999999   887543

>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}

Probab=96.32  E-value=0.0024  Score=56.37  Aligned_cols=77  Identities=19%  Similarity=0.487  Sum_probs=26.2

Q ss_pred             CCCCC-CCCCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCccc----------CCCCCCCCCCCCCCCEeeecCC-
Q psy5752           9 SLSEC-DTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNP----------ESLGCNVVKNCHANAECVYNAT-   76 (222)
Q Consensus         9 ~~~~C-~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~----------~~~~C~~~~~C~~~~~C~~~n~-   76 (222)
                      +.+.| +.+|.++++|.+..... ..++ .|.|++||+|.   .|+.          ..++|.+ .+|.+++.+.  +. 
T Consensus       434 ~~~~C~~C~C~~~gtc~~~~~Cd-~~tg-~C~C~~g~~G~---~Ce~C~~G~~g~~~~~~~C~~-C~C~~~gs~~--~~C  505 (525)
T 4aqs_A          434 DPYGCKSCACNPLGTIPGGNPCD-SETG-YCYCKRLVTGQ---RCDQCLPQHWGLSNDLDGCRP-CDCDLGGALN--NSC  505 (525)
T ss_dssp             STTSSEECCCCTTTBCCSSCCBC-TTTC-CBCBCTTCCST---TTCC---------------------------------
T ss_pred             CCCCCccCCCCCCceecCCCccc-CCCC-EEECCCCCcCC---CcccCCCCccCCCCCCCCCcC-CCCCCCCccC--Ccc
Confidence            44567 66777777776532111 2244 79999999998   7752          1223665 6676665552  22 


Q ss_pred             -CCCeEEecCCCCccCCC
Q psy5752          77 -SAGYRCQCAQGYVGNGV   93 (222)
Q Consensus        77 -~g~~~C~C~~G~~~~~~   93 (222)
                       ...++|.|++||+|..+
T Consensus       506 ~~~tG~C~C~~G~~G~~C  523 (525)
T 4aqs_A          506 SEDSGQCSCLPHMIGRQC  523 (525)
T ss_dssp             ------------------
T ss_pred             CCCCCeeECCCCCcCCCC
Confidence             23457999999988743

>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...

Probab=96.22  E-value=0.0015  Score=58.00  Aligned_cols=38  Identities=26%  Similarity=0.719  Sum_probs=32.0

Q ss_pred             CCCC-CCCCCCCCeecCCCCCCCCCCceeeecC-CCCccCCCCCcccC
Q psy5752          10 LSEC-DTPCHPNAQCTSPDEFNESREQAKCICN-FGYTGDGVTECNPE   55 (222)
Q Consensus        10 ~~~C-~~~C~~~~~C~~~~~~~~~g~~~~C~C~-~G~~g~~~~~C~~~   55 (222)
                      +|+| ++||.|+|+|++..    .++| .|.|+ +||+|.   .|+..
T Consensus         2 ~d~C~~~PC~ngG~C~~~~----~~~y-~C~C~~~G~~G~---~Ce~~   41 (553)
T 1q4g_A            2 VNPCCYYPCQHQGICVRFG----LDRY-QCDCTRTGYSGP---NCTIP   41 (553)
T ss_dssp             CCGGGGCCCCTTCEEEEET----TTEE-EEECTTSSEETT---TTCEE
T ss_pred             CCcCCCCCCCCCCCcCCCC----CCce-EeeCCCCCcCCC---CCCCC
Confidence            6899 99999999999821    4566 99999 999999   88754

>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...

Probab=96.20  E-value=0.0015  Score=58.40  Aligned_cols=38  Identities=29%  Similarity=0.843  Sum_probs=31.4

Q ss_pred             CCCC-CCCCCCCCeecCCCCCCCCCCceeeecC-CCCccCCCCCcccC
Q psy5752          10 LSEC-DTPCHPNAQCTSPDEFNESREQAKCICN-FGYTGDGVTECNPE   55 (222)
Q Consensus        10 ~~~C-~~~C~~~~~C~~~~~~~~~g~~~~C~C~-~G~~g~~~~~C~~~   55 (222)
                      +|+| ++||.|+|+|++..    .++| .|.|+ +||+|.   .|+..
T Consensus         1 vd~C~s~PC~ngG~C~~~~----~~~y-~C~C~~~G~~G~---~Ce~~   40 (587)
T 3nt1_A            1 ANPCCSNPCQNRGECMSTG----FDQY-KCDCTRTGFYGE---NCTTP   40 (587)
T ss_dssp             CCTTTTCCCCTTCEEEEEE----TTEE-EEECTTSSEETT---TTCEE
T ss_pred             CCCCCCCCCCCCCEeeCCC----CCCe-EEecCCCCccCC---CCCCc
Confidence            5899 99999999999621    3566 99999 999999   88753

>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*

Probab=95.81  E-value=0.0069  Score=37.03  Aligned_cols=31  Identities=29%  Similarity=0.779  Sum_probs=22.0

Q ss_pred             CCCCCCCEeeecCCC-CCeEEecCCCCc--cCCCeeec
Q psy5752          63 KNCHANAECVYNATS-AGYRCQCAQGYV--GNGVECHP   97 (222)
Q Consensus        63 ~~C~~~~~C~~~n~~-g~~~C~C~~G~~--~~~~~C~~   97 (222)
                      ..|.  ..|+  +++ ++|.|.|.+||.  .++.+|.+
T Consensus         7 ggC~--~~C~--n~~~gs~~C~C~~Gy~L~~D~~tC~d   40 (59)
T 2wph_E            7 GRCE--QFCK--NSADNKVVCSCTEGYRLAENQKSCEP   40 (59)
T ss_dssp             GGCS--SEEE--ECSTTCEEEECCTTEEECTTSSCEEE
T ss_pred             CCcC--CEeE--eCCCCCEEeeCCCCcEECCCCCcccC
Confidence            4563  4796  888 699999999998  34454443

>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A

Probab=95.80  E-value=0.0076  Score=35.52  Aligned_cols=39  Identities=23%  Similarity=0.743  Sum_probs=28.5

Q ss_pred             CCCC----CCCCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCcccCC
Q psy5752          10 LSEC----DTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPES   56 (222)
Q Consensus        10 ~~~C----~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~~~   56 (222)
                      ..+|    ...|.|+ +|.....   .+.+ .|.|++||+|.   .|+..+
T Consensus         5 ~~~C~~~~~~yC~nG-~C~~~~~---~~~~-~C~C~~gy~G~---RCe~~d   47 (50)
T 3e50_C            5 FNDCPDSHTQFCFHG-TCRFLVQ---EDKP-ACVCHSGYVGA---RCEHAD   47 (50)
T ss_pred             ccccChhhcCcccCC-EEeeccC---CCCe-EEECCCCCccc---CCCcee
Confidence            4556    4789875 9986422   4555 99999999999   887543

>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...

Probab=95.67  E-value=0.0064  Score=54.29  Aligned_cols=38  Identities=24%  Similarity=0.830  Sum_probs=30.2

Q ss_pred             CCCCCCCCCCCCCCCeeeeCCCCeeEeecC-CCCccCCCcccc
Q psy5752         125 LKSCLEDRSLCGKDASCVVASQGHFHCECN-EGFTGNGITCKP  166 (222)
Q Consensus       125 id~C~~~~~~C~~~~~C~n~~~g~~~C~C~-~G~~gd~~~C~~  166 (222)
                      +|+|..+|  |.++++|++...++|.|.|+ +||+|  ..|+.
T Consensus         1 vd~C~s~P--C~ngG~C~~~~~~~y~C~C~~~G~~G--~~Ce~   39 (587)
T 3nt1_A            1 ANPCCSNP--CQNRGECMSTGFDQYKCDCTRTGFYG--ENCTT   39 (587)
T ss_dssp             CCTTTTCC--CCTTCEEEEEETTEEEEECTTSSEET--TTTCE
T ss_pred             CCCCCCCC--CCCCCEeeCCCCCCeEEecCCCCccC--CCCCC
Confidence            47888766  99999999643355999999 99998  67764

>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}

Probab=95.61  E-value=0.0053  Score=37.43  Aligned_cols=32  Identities=34%  Similarity=0.789  Sum_probs=24.3

Q ss_pred             CCCCCCeeeeC---CCCeeEeecCCCCccCCCccccC
Q psy5752         134 LCGKDASCVVA---SQGHFHCECNEGFTGNGITCKPV  167 (222)
Q Consensus       134 ~C~~~~~C~n~---~~g~~~C~C~~G~~gd~~~C~~~  167 (222)
                      .|.++++|+..   ..+.|.|.|++||+|  ..|+..
T Consensus        15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G--~~Ce~~   49 (58)
T 3ltf_D           15 YCLNDAHCFAVKIADLPVYSCECAIGFMG--QRCEYK   49 (58)
T ss_dssp             TSCSSCEEEEEEETTEEEEEEEECTTEES--SSSCEE
T ss_pred             cCCCCCEEeCCccCCCCCEEeECCCCCcc--CCCccc
Confidence            48888999832   234599999999999  677643

>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...

Probab=95.46  E-value=0.0077  Score=53.49  Aligned_cols=37  Identities=24%  Similarity=0.796  Sum_probs=30.7

Q ss_pred             CCCCCCCCCCCCCCCeeee-CCCCeeEeecC-CCCccCCCcccc
Q psy5752         125 LKSCLEDRSLCGKDASCVV-ASQGHFHCECN-EGFTGNGITCKP  166 (222)
Q Consensus       125 id~C~~~~~~C~~~~~C~n-~~~g~~~C~C~-~G~~gd~~~C~~  166 (222)
                      +|+|..+|  |.++++|++ .. ++|.|.|+ +||+|  ..|+.
T Consensus         2 ~d~C~~~P--C~ngG~C~~~~~-~~y~C~C~~~G~~G--~~Ce~   40 (553)
T 1q4g_A            2 VNPCCYYP--CQHQGICVRFGL-DRYQCDCTRTGYSG--PNCTI   40 (553)
T ss_dssp             CCGGGGCC--CCTTCEEEEETT-TEEEEECTTSSEET--TTTCE
T ss_pred             CCcCCCCC--CCCCCCcCCCCC-CceEeeCCCCCcCC--CCCCC
Confidence            57888766  999999999 65 55999999 99999  66753

>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}

Probab=95.41  E-value=0.0066  Score=51.92  Aligned_cols=39  Identities=26%  Similarity=0.554  Sum_probs=0.0

Q ss_pred             CCCCCCCeeeeCCCCeeEeecCCCCccCCCccccCCCCCCCeeee
Q psy5752         133 SLCGKDASCVVASQGHFHCECNEGFTGNGITCKPVRKKESDFLLV  177 (222)
Q Consensus       133 ~~C~~~~~C~n~~~g~~~C~C~~G~~gd~~~C~~~~~~~~~~~~~  177 (222)
                      +.|.++++|.+..    +|.|++||.|  ..|+...+-..+.|..
T Consensus       371 ~~C~ngg~C~~~~----~C~C~~G~~G--~~Ce~c~C~~~g~C~~  409 (426)
T 3zyj_B          371 LHCQNGGTCHNNV----RCLCPAAYTG--ILCEKLRCEEAGSCGS  409 (426)
T ss_dssp             ---------------------------------------------
T ss_pred             ccCCCCCCcCCCC----CCcCCCCCcC--CCCcCCCCCCCCcccC
Confidence            4588888998652    7999999999  5566543333333433

>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=95.31  E-value=0.013  Score=42.91  Aligned_cols=43  Identities=16%  Similarity=0.457  Sum_probs=31.9

Q ss_pred             ccccCCCCCCC-CCCCCCCCeeeeCCCCeeEeecCCCCc--cCCCcccc
Q psy5752         121 ECHPLKSCLED-RSLCGKDASCVVASQGHFHCECNEGFT--GNGITCKP  166 (222)
Q Consensus       121 ~C~~id~C~~~-~~~C~~~~~C~n~~~g~~~C~C~~G~~--gd~~~C~~  166 (222)
                      .+.++++|... ...|.+  .|.|+. ++|+|.|.+||.  +|+++|.+
T Consensus       113 ~~~d~~eC~~~~~~~C~~--~C~n~~-g~~~C~C~~Gy~l~~~~~~C~~  158 (159)
T 1nzi_A          113 VATDINECTDFVDVPCSH--FCNNFI-GGYFCSCPPEYFLHDDMKNCGV  158 (159)
T ss_dssp             EEEECCTTTC-CCCCSSS--EEEEET-TEEEEECCTTCEECTTSSCEEC
T ss_pred             ecccCcccCCCCCCCCCC--cccCcC-CCEEEecCCCcEECCCCCcccc
Confidence            35678899753 245853  799996 569999999999  56677764

>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}

Probab=95.29  E-value=0.0092  Score=48.23  Aligned_cols=45  Identities=18%  Similarity=0.559  Sum_probs=34.5

Q ss_pred             cCCCCCCC-CCCCCCCCeeeeCCCCeeEeecCCCCcc--CCCccccCCCCC
Q psy5752         124 PLKSCLED-RSLCGKDASCVVASQGHFHCECNEGFTG--NGITCKPVRKKE  171 (222)
Q Consensus       124 ~id~C~~~-~~~C~~~~~C~n~~~g~~~C~C~~G~~g--d~~~C~~~~~~~  171 (222)
                      +.|||... ++.|.+  .|.++. ++|+|.|.+||..  |+.+|.+.+++.
T Consensus         1 ~~~eC~~~~~~~C~~--~C~~~~-~~~~C~C~~G~~l~~d~~sC~p~~~c~   48 (283)
T 3f1s_B            1 AKNECHPERTDGCQH--FCLPGQ-ESYTCSCAQGYRLGEDHKQCVPHDQCA   48 (283)
T ss_dssp             --CCCCSSCSSSCSS--BCCCCT-TSCCCBCCTTEEECTTSSCEEECSTTC
T ss_pred             CCCccCCCCCCCCCC--EeeCCC-CCeEecCCCCcccCCCCCccccccccc
Confidence            35788776 678976  799996 5699999999983  668899876654

>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=95.23  E-value=0.0063  Score=45.39  Aligned_cols=49  Identities=27%  Similarity=0.638  Sum_probs=32.5

Q ss_pred             CCCccCCCCCcccCCCCCCC-CC---CCCCCCEeeecCCCCCeEEecCCCCc--cCCCeeec
Q psy5752          42 FGYTGDGVTECNPESLGCNV-VK---NCHANAECVYNATSAGYRCQCAQGYV--GNGVECHP   97 (222)
Q Consensus        42 ~G~~g~~~~~C~~~~~~C~~-~~---~C~~~~~C~~~n~~g~~~C~C~~G~~--~~~~~C~~   97 (222)
                      .||.+.  ..+.+++ +|.. ..   .|..  .|+  |+.++|.|.|.+||.  +++.+|.+
T Consensus       113 ~Gf~~~--~~~~di~-eC~~~~~~~~~C~~--~C~--n~~g~~~C~C~~Gy~l~~d~~~C~~  167 (170)
T 1szb_A          113 TGFEAF--YAAEDID-ECQVAPGEAPTCDH--HCH--NHLGGFYCSCRAGYVLHRNKRTCSE  167 (170)
T ss_dssp             CEEEEE--EEEEECC-TTCCCTTSCCSSSS--EEE--EETTEEEEECCTTEEECTTSSCEEE
T ss_pred             cCceee--eeccccC-cccCCCCCCCccCC--ccc--cCCCCEEEeCCCCcEECCCCCcccc
Confidence            455543  1344555 5876 22   2754  796  899999999999998  45565554

>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A

Probab=94.99  E-value=0.0058  Score=36.04  Aligned_cols=35  Identities=23%  Similarity=0.649  Sum_probs=25.8

Q ss_pred             CCCCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCcccCC
Q psy5752          14 DTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPES   56 (222)
Q Consensus        14 ~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~~~   56 (222)
                      .+.|.| |+|.....   .+.+ .|.|++||+|.   .|+..+
T Consensus        13 ~~yC~n-G~C~~~~~---~~~~-~C~C~~gy~G~---RCe~~~   47 (50)
T 1iox_A           13 KHYCIK-GRCRFVVA---EQTP-SCVCDEGYIGA---RCERVD   47 (50)
T ss_dssp             TTSCTT-CCEEEETT---TTEE-EECCCTTEETT---TTCEEC
T ss_pred             cCcccC-CEEEeEcC---CCCe-EEECCCCcccC---CCCeec
Confidence            478988 79963222   4555 99999999999   887543

>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A

Probab=94.92  E-value=0.073  Score=35.21  Aligned_cols=73  Identities=19%  Similarity=0.459  Sum_probs=52.5

Q ss_pred             CCCCCCCCCCCEeeecCCCCCeEEecCCCCccCCCeeecCCCcCCCCCCCCCCCCCcccCCCccccCCCCCCCCCCCCCC
Q psy5752          59 CNVVKNCHANAECVYNATSAGYRCQCAQGYVGNGVECHPLKSCLEDRSLCGKDSQGYVGNGVECHPLKSCLEDRSLCGKD  138 (222)
Q Consensus        59 C~~~~~C~~~~~C~~~n~~g~~~C~C~~G~~~~~~~C~~~~~C~~~~~~C~~c~~g~~~~g~~C~~id~C~~~~~~C~~~  138 (222)
                      |.. ..|..++.|. +-..+.-.|+|..+|..++..|...+                         ...|+.+.+.|...
T Consensus         7 C~~-tkcp~NA~Cy-r~~dg~EecRCllnykk~~~kCV~~~-------------------------~~~C~~NNGGCd~n   59 (95)
T 1b9w_A            7 CID-TNVPENAACY-RYLDGTEEWRCLLYFKEDAGKCVPAP-------------------------NMTCKDKNGGCAPE   59 (95)
T ss_dssp             CSS-CCCCTTEEEE-ECTTSCEEEEECTTEEEETTEEEECT-------------------------TCCTTTGGGGSCTT
T ss_pred             ccc-CCCCCCcCeE-EEcCCCEEEEEECCeEecCCEEEcCC-------------------------CCCccccCCCcCCC
Confidence            544 5778899997 33457789999999986655444321                         23566677789999


Q ss_pred             CeeeeCCCCeeEeecCCCCc
Q psy5752         139 ASCVVASQGHFHCECNEGFT  158 (222)
Q Consensus       139 ~~C~n~~~g~~~C~C~~G~~  158 (222)
                      |.|......--.|.|...+.
T Consensus        60 A~C~~~~~~kIvC~C~~~~~   79 (95)
T 1b9w_A           60 AECKMNDKNEIVCKCTKEGS   79 (95)
T ss_dssp             SEEEECTTSCEEEECCSTTE
T ss_pred             cceeecCCCcEEEECCCCCC
Confidence            99997763348999998865

>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}

Probab=94.65  E-value=0.027  Score=33.10  Aligned_cols=39  Identities=21%  Similarity=0.554  Sum_probs=28.0

Q ss_pred             cCCCCC----CCCCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCccc
Q psy5752           8 FSLSEC----DTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNP   54 (222)
Q Consensus         8 ~~~~~C----~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~   54 (222)
                      ...++|    .+.|.| |+|.....   .+.+ .|.|++||+|.   .|+.
T Consensus         7 ~~~~~C~~~~~~yC~n-G~C~~i~~---~~~~-~C~C~~gy~G~---RCe~   49 (50)
T 2rnl_A            7 GKKNPCNAEFQNFCIH-GECKYIEH---LEAV-TCKCQQEYFGE---RCGE   49 (50)
T ss_dssp             SCCCTTTTTGGGTCSS-SEEEEETT---TTEE-EEECCSSCCSS---SCCC
T ss_pred             CcCcccCchhhCcCCC-CEEEEecC---CCCe-eEECCCCcccc---cccc
Confidence            345778    278986 69984222   4555 99999999999   7763

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=94.49  E-value=0.063  Score=48.27  Aligned_cols=82  Identities=20%  Similarity=0.391  Sum_probs=51.8

Q ss_pred             CCCCCCCCCCCCCCCeeeeCCC-CeeEeecCCCCc--cCCCccccCCCCCCCeeeecCCcEEEEcCCCCCCCCCCCc-ee
Q psy5752         125 LKSCLEDRSLCGKDASCVVASQ-GHFHCECNEGFT--GNGITCKPVRKKESDFLLVNQGMFMLRVPYQPTRTDRGRP-II  200 (222)
Q Consensus       125 id~C~~~~~~C~~~~~C~n~~~-g~~~C~C~~G~~--gd~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~  200 (222)
                      .++|....+.|.+  .|.+.+. ++|+|.|++||.  .|+++|.+..   ..+++.+....+...++....  .... +.
T Consensus       272 ~n~C~~~ng~Cs~--lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~~~---~~~Ll~~~~~~i~~i~l~~~~--~~~~~~~  344 (619)
T 3s94_A          272 TNPCGIDNGGCSH--LCLMSPVKPFYQCACPTGVKLLENGKTCKDGA---TELLLLARRTDLRRISLDTPD--FTDIVLQ  344 (619)
T ss_dssp             CCTTTTTGGGCSS--EEEECSSTTSEEEECCTTCCBCTTSSCBCSSC---SEEEEEEESSCEEEEESSSTT--CCCEECC
T ss_pred             cccccCCCCcccc--eEECCCCCCCceEeCCchheecccCcccCCCC---ceEEEEEcccceEEEecCCCc--cceeEEe
Confidence            4678766667865  8998763 349999999998  4778898743   457777766666666654432  1111 11


Q ss_pred             ecCCceeeeeecC
Q psy5752         201 NHPNQMLIGLCLS  213 (222)
Q Consensus       201 ~~~~~~~~~~~~~  213 (222)
                      +.....+++|+||
T Consensus       345 ~~~l~~~~~ld~d  357 (619)
T 3s94_A          345 LEDIRHAIAIDYD  357 (619)
T ss_dssp             CSCCSSEEEEEEE
T ss_pred             ccccCccEEEEEE
Confidence            2223446667665

>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1

Probab=94.36  E-value=0.016  Score=37.43  Aligned_cols=37  Identities=32%  Similarity=0.811  Sum_probs=26.0

Q ss_pred             CCCC----CCCCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCccc
Q psy5752          10 LSEC----DTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNP   54 (222)
Q Consensus        10 ~~~C----~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~   54 (222)
                      .++|    .+.|.|+ +|+....   .+.+ .|.|.+||+|.   .|+.
T Consensus        37 ~~pC~~~~~~yClnG-~C~~i~~---~~~~-~C~C~~GYtG~---RCE~   77 (79)
T 1xdt_R           37 RDPCLRKYKDFCIHG-ECKYVKE---LRAP-SCICHPGYHGE---RCHG   77 (79)
T ss_dssp             --CTTTTTTTCCSSE-EECCBGG---GTBC-CEEECTTEEST---TCCE
T ss_pred             CCCCCccccCcCCCC-EeeeecC---CCCe-EEEcCCCcccc---cccc
Confidence            4677    3789875 8965322   4556 89999999999   8863

>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A

Probab=93.34  E-value=0.055  Score=40.02  Aligned_cols=30  Identities=20%  Similarity=0.597  Sum_probs=21.6

Q ss_pred             CCCCCCEeeecCCCCCeEE-ecCCCCccCCC
Q psy5752          64 NCHANAECVYNATSAGYRC-QCAQGYVGNGV   93 (222)
Q Consensus        64 ~C~~~~~C~~~n~~g~~~C-~C~~G~~~~~~   93 (222)
                      +|.+++.|......+.+.| .|+++|+|...
T Consensus         2 ~C~~~g~C~~~~~~g~~~C~~C~~g~~G~~C   32 (162)
T 1klo_A            2 PCPGGSSCAIVPKTKEVVCTHCPTGTAGKRC   32 (162)
T ss_dssp             CSCTTCCEEECSSSCCEEECSCCTTEESTTS
T ss_pred             cCcCcCcccccCCCCCEEeCCCCCCCcCCCC
Confidence            5777889962122367899 79999998854

>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A

Probab=93.15  E-value=0.11  Score=30.50  Aligned_cols=30  Identities=27%  Similarity=0.668  Sum_probs=23.5

Q ss_pred             CCCCCCCEeeecCCCCCeEEecCCCCccCCC
Q psy5752          63 KNCHANAECVYNATSAGYRCQCAQGYVGNGV   93 (222)
Q Consensus        63 ~~C~~~~~C~~~n~~g~~~C~C~~G~~~~~~   93 (222)
                      ..|.++ +|......+.+.|.|.+||+|..+
T Consensus        14 ~yC~nG-~C~~~~~~~~~~C~C~~gy~G~RC   43 (50)
T 3e50_C           14 QFCFHG-TCRFLVQEDKPACVCHSGYVGARC   43 (50)
T ss_pred             CcccCC-EEeeccCCCCeEEECCCCCcccCC
Confidence            788876 997323457899999999999865

>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A

Probab=93.08  E-value=0.084  Score=30.93  Aligned_cols=31  Identities=26%  Similarity=0.721  Sum_probs=24.8

Q ss_pred             CCCCCCCEeeecCCCCCeEEecCCCCccCCCe
Q psy5752          63 KNCHANAECVYNATSAGYRCQCAQGYVGNGVE   94 (222)
Q Consensus        63 ~~C~~~~~C~~~n~~g~~~C~C~~G~~~~~~~   94 (222)
                      ..|.+ ++|+.....+.+.|+|++||+|..++
T Consensus        14 ~yC~n-G~C~~~~~~~~~~C~C~~gy~G~RCe   44 (50)
T 1iox_A           14 HYCIK-GRCRFVVAEQTPSCVCDEGYIGARCE   44 (50)
T ss_dssp             TSCTT-CCEEEETTTTEEEECCCTTEETTTTC
T ss_pred             CcccC-CEEEeEcCCCCeEEECCCCcccCCCC
Confidence            77887 68954466778999999999998664

>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}

Probab=92.36  E-value=0.12  Score=45.25  Aligned_cols=41  Identities=37%  Similarity=0.842  Sum_probs=33.3

Q ss_pred             CCCCCCC-CCCCCCCCeeeeCCCCeeEeecCCCCccCCCccc
Q psy5752         125 LKSCLED-RSLCGKDASCVVASQGHFHCECNEGFTGNGITCK  165 (222)
Q Consensus       125 id~C~~~-~~~C~~~~~C~n~~~g~~~C~C~~G~~gd~~~C~  165 (222)
                      ++.|..+ ++.|+.++.|+.+..++|.|.|+.||.|++..|-
T Consensus        18 ~~~c~~~~~~~c~~~a~C~~~~~~~~~c~C~~G~ag~G~~c~   59 (551)
T 3fby_A           18 QRFCPDGSPSECHEHADCVLERDGSRSCVCAVGWAGNGILCG   59 (551)
T ss_dssp             CCBCTTSSBCCCCTTEEEEECTTSCEEEEECTTEESSSSSCE
T ss_pred             cccCCCCCCCCCCCCCeeEeCCCCCEecCCCCCCCCCCcccC
Confidence            4456443 3679999999998888899999999999887775

>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A

Probab=92.31  E-value=0.36  Score=33.77  Aligned_cols=29  Identities=24%  Similarity=0.733  Sum_probs=22.7

Q ss_pred             CCCCCCEeeecCCC--CCe-EEecCCCCccCCCe
Q psy5752          64 NCHANAECVYNATS--AGY-RCQCAQGYVGNGVE   94 (222)
Q Consensus        64 ~C~~~~~C~~~n~~--g~~-~C~C~~G~~~~~~~   94 (222)
                      +|.++++|+  +..  .+| .|.|++||+|..++
T Consensus         2 pC~nggtC~--~~~~~~~~~~C~Cp~g~~G~~Ce   33 (122)
T 2fd6_A            2 DCLNGGTCV--SNKYFSNIHWCNCPKKFGGQHCE   33 (122)
T ss_dssp             CCCSSCEEE--ECTTTTTCEEEECCTTEESTTSC
T ss_pred             CCCCcCCcC--CCcccCCCCCccCCCCCCCcccc
Confidence            688899997  543  556 99999999987554

>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}

Probab=92.00  E-value=0.17  Score=29.56  Aligned_cols=30  Identities=30%  Similarity=0.695  Sum_probs=24.1

Q ss_pred             CCCCCCCEeeecCCCCCeEEecCCCCccCCC
Q psy5752          63 KNCHANAECVYNATSAGYRCQCAQGYVGNGV   93 (222)
Q Consensus        63 ~~C~~~~~C~~~n~~g~~~C~C~~G~~~~~~   93 (222)
                      ..|.+ ++|++....+.+.|.|++||+|..+
T Consensus        18 ~yC~n-G~C~~i~~~~~~~C~C~~gy~G~RC   47 (50)
T 2rnl_A           18 NFCIH-GECKYIEHLEAVTCKCQQEYFGERC   47 (50)
T ss_dssp             GTCSS-SEEEEETTTTEEEEECCSSCCSSSC
T ss_pred             CcCCC-CEEEEecCCCCeeEECCCCcccccc
Confidence            67876 5997446677899999999998865

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=91.85  E-value=0.13  Score=41.76  Aligned_cols=40  Identities=25%  Similarity=0.584  Sum_probs=29.9

Q ss_pred             cCCCCCCC---CCCCCCCCeeeeCCC-----CeeEeecCCCCc--cCCCccc
Q psy5752         124 PLKSCLED---RSLCGKDASCVVASQ-----GHFHCECNEGFT--GNGITCK  165 (222)
Q Consensus       124 ~id~C~~~---~~~C~~~~~C~n~~~-----g~~~C~C~~G~~--gd~~~C~  165 (222)
                      ..++|...   ++.|.+  .|.+.+.     ++|+|.|+.||.  .|+++|.
T Consensus       266 ~~n~C~~~~~~ng~Cs~--~C~~~p~~~~~~~~~~C~C~~g~~l~~d~~~C~  315 (316)
T 1ijq_A          266 GVNWCERTTLSNGGCQY--LCLPAPQINPHSPKFTCACPDGMLLARDMRSCL  315 (316)
T ss_dssp             CCCTTSSSSSGGGGCSS--EEEECCCCSTTCCSEEEECCTTCEECTTSSCEE
T ss_pred             ccccccccccCCCCcCc--ccCCCccccCCCCCeEeeCCCCCEECCCCCccC
Confidence            45788765   566865  8998752     459999999998  4677775

>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=91.78  E-value=0.082  Score=38.58  Aligned_cols=40  Identities=23%  Similarity=0.526  Sum_probs=28.3

Q ss_pred             cccCCCCCCC--CCCCCCCCEeeecCCCCCeEEecCCCCc--cCCCeee
Q psy5752          52 CNPESLGCNV--VKNCHANAECVYNATSAGYRCQCAQGYV--GNGVECH   96 (222)
Q Consensus        52 C~~~~~~C~~--~~~C~~~~~C~~~n~~g~~~C~C~~G~~--~~~~~C~   96 (222)
                      +.+++ +|..  ...|.  ..|.  |..++|+|.|.+||.  +++..|.
T Consensus       114 ~~d~~-eC~~~~~~~C~--~~C~--n~~g~~~C~C~~Gy~l~~~~~~C~  157 (159)
T 1nzi_A          114 ATDIN-ECTDFVDVPCS--HFCN--NFIGGYFCSCPPEYFLHDDMKNCG  157 (159)
T ss_dssp             EEECC-TTTC-CCCCSS--SEEE--EETTEEEEECCTTCEECTTSSCEE
T ss_pred             cccCc-ccCCCCCCCCC--Cccc--CcCCCEEEecCCCcEECCCCCccc
Confidence            44554 4875  24574  5796  889999999999998  4455554

>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}

Probab=91.62  E-value=0.087  Score=44.72  Aligned_cols=37  Identities=22%  Similarity=0.660  Sum_probs=30.8

Q ss_pred             CCCC-CCCCCCCCeecCCCCCCCCCCceeeecCC-CCccCCCCCcccC
Q psy5752          10 LSEC-DTPCHPNAQCTSPDEFNESREQAKCICNF-GYTGDGVTECNPE   55 (222)
Q Consensus        10 ~~~C-~~~C~~~~~C~~~~~~~~~g~~~~C~C~~-G~~g~~~~~C~~~   55 (222)
                      .++| ++||.++++|+..     ...| .|.|+. ||.|.   .|+..
T Consensus       185 ~~~C~~~pC~n~g~C~~~-----~~~~-~C~C~~~~~~G~---~C~~~  223 (410)
T 3asi_A          185 STTCQEDSCSNQGVCLQQ-----WDGF-SCDCSMTSFSGP---LCNDP  223 (410)
T ss_dssp             SSCCCTTSSSTTCEEEEC-----SSSE-EEECTTTSEEST---TSCEE
T ss_pred             CCCcccccCCCCCEecCC-----CCCc-eEeccCCcccCC---CCCCC
Confidence            4789 8999999999983     4566 999996 99998   88754

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=91.29  E-value=0.15  Score=41.64  Aligned_cols=41  Identities=29%  Similarity=0.693  Sum_probs=30.7

Q ss_pred             CCCCCCCCCCCCCCCeeeeCCCC-eeEeecCCCCc--cCCCccccC
Q psy5752         125 LKSCLEDRSLCGKDASCVVASQG-HFHCECNEGFT--GNGITCKPV  167 (222)
Q Consensus       125 id~C~~~~~~C~~~~~C~n~~~g-~~~C~C~~G~~--gd~~~C~~~  167 (222)
                      .++|...++.|.+  .|...+.+ +|+|.|+.||.  .|+++|.+-
T Consensus       267 ~n~C~~~ng~Cs~--~C~~~~~~~~~~C~C~~g~~l~~d~~~c~~~  310 (318)
T 3sov_A          267 TNPCGIDNGGCSH--LCLMSPVKPFYQCACPTGVKLLENGKTCKDG  310 (318)
T ss_dssp             CCTTTTTGGGCSS--EEEECSSTTSEEEECSTTCCBCTTSSCBCC-
T ss_pred             ccccccCCCCcce--EEecCCCCCCeEEECCCCCEECCCCCCCCCC
Confidence            4678766667865  79988643 59999999998  477888864

>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*

Probab=91.07  E-value=0.13  Score=37.26  Aligned_cols=35  Identities=20%  Similarity=0.483  Sum_probs=25.6

Q ss_pred             CCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCcccCC
Q psy5752          16 PCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPES   56 (222)
Q Consensus        16 ~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~~~   56 (222)
                      ||.|+++|+....   ...+..|.|++||.|.   .|+...
T Consensus        14 pC~NGGtC~~~~~---~s~~~~C~Cp~g~~G~---~Cei~~   48 (145)
T 2i9a_A           14 DCLNGGTCVSNKY---FSNIHWCNCPKKFGGQ---HCEIDK   48 (145)
T ss_dssp             CCCTTCEEEECSS---STTCEEEECCTTEEST---TSCEES
T ss_pred             CCCCCCCcCCCcc---ccCCccccCCCCCCCC---ceeccc
Confidence            8999999976311   1222279999999999   897543

>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1

Probab=90.36  E-value=0.12  Score=33.26  Aligned_cols=30  Identities=30%  Similarity=0.648  Sum_probs=23.4

Q ss_pred             CCCCCCCEeeecCCCCCeEEecCCCCccCCC
Q psy5752          63 KNCHANAECVYNATSAGYRCQCAQGYVGNGV   93 (222)
Q Consensus        63 ~~C~~~~~C~~~n~~g~~~C~C~~G~~~~~~   93 (222)
                      +.|.++ .|+.....+.+.|.|.+||+|..+
T Consensus        46 ~yClnG-~C~~i~~~~~~~C~C~~GYtG~RC   75 (79)
T 1xdt_R           46 DFCIHG-ECKYVKELRAPSCICHPGYHGERC   75 (79)
T ss_dssp             TCCSSE-EECCBGGGTBCCEEECTTEESTTC
T ss_pred             CcCCCC-EeeeecCCCCeEEEcCCCcccccc
Confidence            789876 895334456789999999999865

>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A

Probab=90.33  E-value=0.47  Score=31.36  Aligned_cols=69  Identities=23%  Similarity=0.454  Sum_probs=49.7

Q ss_pred             CCCCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCcccCC-CCCCC-CCCCCCCCEeeecCCCCCeEEecCCCCc
Q psy5752          14 DTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPES-LGCNV-VKNCHANAECVYNATSAGYRCQCAQGYV   89 (222)
Q Consensus        14 ~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~~~-~~C~~-~~~C~~~~~C~~~n~~g~~~C~C~~G~~   89 (222)
                      ...|..++.|....    .+.- .|+|..+|.-++. .|.... ..|.. ...|..++.|. ......-.|.|...+.
T Consensus         9 ~tkcp~NA~Cyr~~----dg~E-ecRCllnykk~~~-kCV~~~~~~C~~NNGGCd~nA~C~-~~~~~kIvC~C~~~~~   79 (95)
T 1b9w_A            9 DTNVPENAACYRYL----DGTE-EWRCLLYFKEDAG-KCVPAPNMTCKDKNGGCAPEAECK-MNDKNEIVCKCTKEGS   79 (95)
T ss_dssp             SCCCCTTEEEEECT----TSCE-EEEECTTEEEETT-EEEECTTCCTTTGGGGSCTTSEEE-ECTTSCEEEECCSTTE
T ss_pred             cCCCCCCcCeEEEc----CCCE-EEEEECCeEecCC-EEEcCCCCCccccCCCcCCCccee-ecCCCcEEEECCCCCC
Confidence            45788899999842    4565 9999999985544 786443 23765 57899999996 2333678899998764

>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*

Probab=89.32  E-value=0.29  Score=36.90  Aligned_cols=34  Identities=24%  Similarity=0.752  Sum_probs=26.0

Q ss_pred             CcccCCCCCCCCCCCCCCCEeeecCCCCCeEEecCCCCccCCC
Q psy5752          51 ECNPESLGCNVVKNCHANAECVYNATSAGYRCQCAQGYVGNGV   93 (222)
Q Consensus        51 ~C~~~~~~C~~~~~C~~~~~C~~~n~~g~~~C~C~~G~~~~~~   93 (222)
                      .|....  |.  ..|.+++.|+   .++  .|+|++||.|..+
T Consensus       145 ~C~~~~--C~--~~C~ngG~Cv---~P~--~C~C~~Gw~G~~C  178 (188)
T 2ygo_A          145 TCQQAE--CP--GGCRNGGFCN---ERR--ICECPDGFHGPHC  178 (188)
T ss_dssp             EECCCC--CT--TCCCTTCEEC---TTS--CEECCTTCBTTTT
T ss_pred             cccCCc--cC--CCCCCCCEeC---CCC--cccCcCCCCCCCC
Confidence            566543  75  6999999994   444  8999999998754

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=89.15  E-value=0.22  Score=41.17  Aligned_cols=39  Identities=23%  Similarity=0.693  Sum_probs=23.5

Q ss_pred             CCCCCCCCCCCCEeeecCCCCCeEEecCCCCc--cCCCeeecCCC
Q psy5752          58 GCNVVKNCHANAECVYNATSAGYRCQCAQGYV--GNGVECHPLKS  100 (222)
Q Consensus        58 ~C~~~~~C~~~~~C~~~n~~g~~~C~C~~G~~--~~~~~C~~~~~  100 (222)
                      ||.....|.  ..|+  |++++|.|.|.+||.  .++.+|...++
T Consensus         3 ec~~~~~C~--~~C~--n~~g~~~C~C~~g~~l~~d~~~C~~~~~   43 (349)
T 3v64_C            3 ECAEEGYCS--QGCT--NSEGAFQCWCEAGYELRPDRRSCKALGP   43 (349)
T ss_dssp             ------CCS--SEEC--CC---CCEECCTTEEECTTSSCEEESSS
T ss_pred             ccCCCCCCc--Ceee--cCCCCeEEECCCCccCCCCCCccccccc
Confidence            354335674  4896  999999999999998  45678876654

>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A

Probab=89.10  E-value=0.11  Score=37.62  Aligned_cols=38  Identities=32%  Similarity=0.844  Sum_probs=30.1

Q ss_pred             CcccCCCCCCCCCCCCCCCEeeecCCCCCeEEecCCCCccCCC
Q psy5752          51 ECNPESLGCNVVKNCHANAECVYNATSAGYRCQCAQGYVGNGV   93 (222)
Q Consensus        51 ~C~~~~~~C~~~~~C~~~~~C~~~n~~g~~~C~C~~G~~~~~~   93 (222)
                      .|+..  +|.+ .+|.+++.|.  +..++|.|.|.+||+|+.+
T Consensus       116 ICe~~--~~~~-~pc~~~g~C~--~~~~~~~c~C~~g~~g~~C  153 (157)
T 1g1t_A          116 LCYTA--ACTN-TSCSGHGECV--ETINNYTCKCDPGFSGLKC  153 (157)
T ss_dssp             EEEEC--CCCT-TGGGGSEEEE--EETTEEEEEECTTEESTTS
T ss_pred             EeCcC--CCCC-CCCCCCCEee--cCCCCeeEECCCCccCccc
Confidence            45543  3665 7888889996  7789999999999998854

>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}

Probab=88.61  E-value=0.38  Score=40.72  Aligned_cols=37  Identities=32%  Similarity=0.909  Sum_probs=29.7

Q ss_pred             CCCCCCCCCCCCCCCeeeeCCCCeeEeecCC-CCccCCCcccc
Q psy5752         125 LKSCLEDRSLCGKDASCVVASQGHFHCECNE-GFTGNGITCKP  166 (222)
Q Consensus       125 id~C~~~~~~C~~~~~C~n~~~g~~~C~C~~-G~~gd~~~C~~  166 (222)
                      .+.|...+  |.++++|+....+ |.|.|+. ||.|  ..|+.
T Consensus       185 ~~~C~~~p--C~n~g~C~~~~~~-~~C~C~~~~~~G--~~C~~  222 (410)
T 3asi_A          185 STTCQEDS--CSNQGVCLQQWDG-FSCDCSMTSFSG--PLCND  222 (410)
T ss_dssp             SSCCCTTS--SSTTCEEEECSSS-EEEECTTTSEES--TTSCE
T ss_pred             CCCccccc--CCCCCEecCCCCC-ceEeccCCcccC--CCCCC
Confidence            46787654  9999999998755 9999996 9988  67764

>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A

Probab=87.70  E-value=0.18  Score=36.46  Aligned_cols=36  Identities=28%  Similarity=0.941  Sum_probs=27.7

Q ss_pred             CCCCCCCCCCCCCCCeeeeCCCCeeEeecCCCCccCCCccc
Q psy5752         125 LKSCLEDRSLCGKDASCVVASQGHFHCECNEGFTGNGITCK  165 (222)
Q Consensus       125 id~C~~~~~~C~~~~~C~n~~~g~~~C~C~~G~~gd~~~C~  165 (222)
                      .++|...  +|.+++.|.+.. +.|.|.|.+||.|  ..|+
T Consensus       119 ~~~~~~~--pc~~~g~C~~~~-~~~~c~C~~g~~g--~~Ce  154 (157)
T 1g1t_A          119 TAACTNT--SCSGHGECVETI-NNYTCKCDPGFSG--LKCE  154 (157)
T ss_dssp             ECCCCTT--GGGGSEEEEEET-TEEEEEECTTEES--TTSC
T ss_pred             cCCCCCC--CCCCCCEeecCC-CCeeEECCCCccC--cccc
Confidence            3566543  488889999886 5699999999998  4564

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=86.28  E-value=0.3  Score=43.90  Aligned_cols=39  Identities=26%  Similarity=0.638  Sum_probs=28.8

Q ss_pred             CCCCCCCCCCCCCCCeeeeCCCCeeEeecCCCCc--cCCCcccc
Q psy5752         125 LKSCLEDRSLCGKDASCVVASQGHFHCECNEGFT--GNGITCKP  166 (222)
Q Consensus       125 id~C~~~~~~C~~~~~C~n~~~g~~~C~C~~G~~--gd~~~C~~  166 (222)
                      .++|...++.|.+  .|.+.+ ++|+|.|++||.  .|+++|..
T Consensus       578 ~~~C~~~ng~C~~--~C~~~~-~~~~C~C~~g~~l~~d~~~C~~  618 (619)
T 3s94_A          578 SNPCAEENGGCSH--LCLYRP-QGLRCACPIGFELISDMKTCIV  618 (619)
T ss_dssp             CCGGGSGGGGCSS--EEEEET-TEEEEECCTTCEECSSTTCEEC
T ss_pred             cccCCCCCCChhH--hhccCC-CCeEEECCCCCEECCCCCcCCC
Confidence            4677665566865  799987 449999999998  46677753

>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}

Probab=85.89  E-value=0.46  Score=41.67  Aligned_cols=39  Identities=28%  Similarity=0.889  Sum_probs=31.2

Q ss_pred             CCCCC----CCCCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCcc
Q psy5752           9 SLSEC----DTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECN   53 (222)
Q Consensus         9 ~~~~C----~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~   53 (222)
                      .++.|    .++|..++.|+.. .   .+.| .|.|+.||.|++. .|.
T Consensus        17 ~~~~c~~~~~~~c~~~a~C~~~-~---~~~~-~c~C~~G~ag~G~-~c~   59 (551)
T 3fby_A           17 AQRFCPDGSPSECHEHADCVLE-R---DGSR-SCVCAVGWAGNGI-LCG   59 (551)
T ss_dssp             BCCBCTTSSBCCCCTTEEEEEC-T---TSCE-EEEECTTEESSSS-SCE
T ss_pred             ccccCCCCCCCCCCCCCeeEeC-C---CCCE-ecCCCCCCCCCCc-ccC
Confidence            45668    2699999999995 2   5555 9999999999887 776

>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*

Probab=85.82  E-value=0.4  Score=46.66  Aligned_cols=38  Identities=21%  Similarity=0.613  Sum_probs=31.0

Q ss_pred             CCCC-CCCCCCCCeecCCCCCCCCCCceeeecC-CCCccCCCCCcccCC
Q psy5752          10 LSEC-DTPCHPNAQCTSPDEFNESREQAKCICN-FGYTGDGVTECNPES   56 (222)
Q Consensus        10 ~~~C-~~~C~~~~~C~~~~~~~~~g~~~~C~C~-~G~~g~~~~~C~~~~   56 (222)
                      .+.| ++||.|+|+|+..     ...| .|.|+ +||+|.   .|+...
T Consensus      1017 ~~~C~~~pC~ngG~C~~~-----~~~~-~C~C~~~g~~G~---~C~~~~ 1056 (1245)
T 3qcw_A         1017 STTCQEDSCSNQGVCLQQ-----WDGF-SCDCSMTSFSGP---LCNDPG 1056 (1245)
T ss_dssp             CCCCCTTSSSSSCEEEEE-----TTEE-EEECTTSSCBST---TSCBCC
T ss_pred             cCceECCcCCCCCEeCCC-----CCCC-EEECCCCCCCCC---CccCCC
Confidence            4789 8999999999983     4455 99999 699999   887543

>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}

Probab=85.72  E-value=0.5  Score=37.83  Aligned_cols=41  Identities=32%  Similarity=0.866  Sum_probs=31.0

Q ss_pred             CCCC--CCCCCCCCEeeecCCCCCeEEecCCCCc--cCCCeeecCCCcC
Q psy5752          58 GCNV--VKNCHANAECVYNATSAGYRCQCAQGYV--GNGVECHPLKSCL  102 (222)
Q Consensus        58 ~C~~--~~~C~~~~~C~~~n~~g~~~C~C~~G~~--~~~~~C~~~~~C~  102 (222)
                      ||..  ...|.  ..|.  ++.++|+|.|..||.  .+...|.+.++|.
T Consensus         4 eC~~~~~~~C~--~~C~--~~~~~~~C~C~~G~~l~~d~~sC~p~~~c~   48 (283)
T 3f1s_B            4 ECHPERTDGCQ--HFCL--PGQESYTCSCAQGYRLGEDHKQCVPHDQCA   48 (283)
T ss_dssp             CCCSSCSSSCS--SBCC--CCTTSCCCBCCTTEEECTTSSCEEECSTTC
T ss_pred             ccCCCCCCCCC--CEee--CCCCCeEecCCCCcccCCCCCccccccccc
Confidence            3654  25674  4785  899999999999998  4567888887765

>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*

Probab=83.93  E-value=0.55  Score=45.66  Aligned_cols=36  Identities=31%  Similarity=0.798  Sum_probs=30.0

Q ss_pred             CCCC-CCCCCCCCeecCCCCCCCCCCceeeecC-CCCccCCCCCccc
Q psy5752          10 LSEC-DTPCHPNAQCTSPDEFNESREQAKCICN-FGYTGDGVTECNP   54 (222)
Q Consensus        10 ~~~C-~~~C~~~~~C~~~~~~~~~g~~~~C~C~-~G~~g~~~~~C~~   54 (222)
                      .++| ++||.+++.|+..     ...| .|.|+ +||.|.   .|+.
T Consensus       619 ~~~C~~~pC~ngg~C~~~-----~~~~-~C~C~~~g~~G~---~C~~  656 (1245)
T 3qcw_A          619 AKPCLSNPCKNNGMCRDG-----WNRY-VCDCSGTGYLGR---SCER  656 (1245)
T ss_dssp             SCGGGSCCCCTTCEEEEC-----SSSE-EEECTTTTEEST---TSCE
T ss_pred             CCCCCccCCCCCCEEeCC-----CCCe-EEECCCCCcccc---cCcc
Confidence            5789 9999999999983     4566 99999 799998   7753

>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*

Probab=83.72  E-value=3  Score=29.97  Aligned_cols=30  Identities=23%  Similarity=0.646  Sum_probs=23.0

Q ss_pred             CCCCCCCEeeecCC--CCCe-EEecCCCCccCCCe
Q psy5752          63 KNCHANAECVYNAT--SAGY-RCQCAQGYVGNGVE   94 (222)
Q Consensus        63 ~~C~~~~~C~~~n~--~g~~-~C~C~~G~~~~~~~   94 (222)
                      -+|.++++|+  ..  ...+ .|.|++||.|..++
T Consensus        13 cpC~NGGtC~--~~~~~s~~~~C~Cp~g~~G~~Ce   45 (145)
T 2i9a_A           13 CDCLNGGTCV--SNKYFSNIHWCNCPKKFGGQHCE   45 (145)
T ss_dssp             CCCCTTCEEE--ECSSSTTCEEEECCTTEESTTSC
T ss_pred             CCCCCCCCcC--CCccccCCccccCCCCCCCCcee
Confidence            3799999996  33  3456 89999999987654

>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}

Probab=81.16  E-value=0.31  Score=41.70  Aligned_cols=38  Identities=26%  Similarity=0.755  Sum_probs=0.0

Q ss_pred             CCCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCcccCCCCCCCCCCCCCCCEee
Q psy5752          15 TPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPESLGCNVVKNCHANAECV   72 (222)
Q Consensus        15 ~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~~~~~C~~~~~C~~~~~C~   72 (222)
                      .+|.|+++|++.      .   .|.|++||+|.   .|+.        ..|.+++.|.
T Consensus       371 ~~C~ngg~C~~~------~---~C~C~~G~~G~---~Ce~--------c~C~~~g~C~  408 (426)
T 3zyj_B          371 LHCQNGGTCHNN------V---RCLCPAAYTGI---LCEK--------LRCEEAGSCG  408 (426)
T ss_dssp             ----------------------------------------------------------
T ss_pred             ccCCCCCCcCCC------C---CCcCCCCCcCC---CCcC--------CCCCCCCccc
Confidence            467777778762      1   68888888887   5543        3444456664

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	222
d1gl4a2	40	g.3.11.5 (A:359-398) EGF-like domain of nidogen-1	6e-05
d1gl4a2	40	g.3.11.5 (A:359-398) EGF-like domain of nidogen-1	2e-04

>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 40

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-like domain of nidogen-1
domain: EGF-like domain of nidogen-1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.1 bits (86), Expect = 6e-05
 Identities = 13/40 (32%), Positives = 16/40 (40%), Gaps = 1/40 (2%)

Query: 127 SCLEDRSLCGKDASCVVASQGHFHCECNEGFTGNGITCKP 166
           +C  +R  C   A C       F C C   +TGNG  C  
Sbjct: 1   TCANNRHQCSVHAECR-DYATGFCCRCVANYTGNGRQCVA 39

>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 40

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-like domain of nidogen-1
domain: EGF-like domain of nidogen-1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.6 bits (82), Expect = 2e-04
 Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 2/34 (5%)

Query: 64 NCHANAECVYNATSAGYRCQCAQGYVGNGVECHP 97
           C  +AEC     + G+ C+C   Y GNG +C  
Sbjct: 8  QCSVHAECRD--YATGFCCRCVANYTGNGRQCVA 39

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	222
d1edmb_	39	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	98.88
d2vj3a1	42	Neurogenic locus notch homolog protein 1, Notch1 {	98.87
d1emoa1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.85
d2c4fl1	37	Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}	98.82
d2vj3a1	42	Neurogenic locus notch homolog protein 1, Notch1 {	98.77
d2vj3a2	39	Neurogenic locus notch homolog protein 1, Notch1 {	98.73
d1lmja1	44	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.72
d1lmja2	42	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.69
d1emoa1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.69
d1gl4a2	40	EGF-like domain of nidogen-1 {Mouse (Mus musculus)	98.63
d2c4fl1	37	Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}	98.63
d1xkba1	39	Factor X, N-terminal module {Human (Homo sapiens)	98.62
d1apqa_	53	Complement protease C1R {Human (Homo sapiens) [Tax	98.61
d1edmb_	39	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	98.61
d2vj3a2	39	Neurogenic locus notch homolog protein 1, Notch1 {	98.6
d2vj3a3	35	Neurogenic locus notch homolog protein 1, Notch1 {	98.6
d1uzka2	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.55
d1uzka1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.54
d1i0ua2	41	Low density lipoprotein (LDL) receptor, different	98.46
d1g1sa2	40	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	98.44
d1nt0a3	45	Mannose-binding protein associated serine protease	98.44
d2vj3a3	35	Neurogenic locus notch homolog protein 1, Notch1 {	98.41
d1g1ta2	39	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	98.4
d1tpga1	41	Plasminogen activator (tissue-type), t-PA {Human (	98.4
d1szba2	45	Mannose-binding protein associated serine protease	98.37
d1xkba1	39	Factor X, N-terminal module {Human (Homo sapiens)	98.34
d1gl4a2	40	EGF-like domain of nidogen-1 {Mouse (Mus musculus)	98.31
d1q4ga2	42	Prostaglandin H2 synthase-1, EGF-like module {Shee	98.3
d1dx5i3	40	Thrombomodulin, different EGF-like domains {Human	98.3
d1autl1	48	Activated protein c (autoprothrombin IIa) {Human (	98.26
d3bpse1	40	Low density lipoprotein (LDL) receptor, different	98.22
d1nzia2	42	Complement C1S component {Human (Homo sapiens) [Ta	98.13
d1cvua2	41	Prostaglandin H2 synthase-1, EGF-like module {Mous	98.13
d1g1sa2	40	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	98.12
d1q4ga2	42	Prostaglandin H2 synthase-1, EGF-like module {Shee	98.08
d1lmja1	44	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.07
d1i0ua2	41	Low density lipoprotein (LDL) receptor, different	98.03
d1g1ta2	39	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	98.02
d1lmja2	42	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	97.96
d1uzka1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	97.91
d1haea_	63	Heregulin-alpha, EGF-like domain {Human (Homo sapi	97.88
d3egfa_	53	Epidermal growth factor, EGF {Mouse (Mus musculus)	97.88
d1cvua2	41	Prostaglandin H2 synthase-1, EGF-like module {Mous	97.87
d1apqa_	53	Complement protease C1R {Human (Homo sapiens) [Tax	97.86
d1tpga1	41	Plasminogen activator (tissue-type), t-PA {Human (	97.86
d1uzka2	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	97.84
d1autl1	48	Activated protein c (autoprothrombin IIa) {Human (	97.83
d1nqlb_	48	Epidermal growth factor, EGF {Human (Homo sapiens)	97.72
d1dx5i3	40	Thrombomodulin, different EGF-like domains {Human	97.71
d1autl2	50	Activated protein c (autoprothrombin IIa) {Human (	97.67
d1nt0a3	45	Mannose-binding protein associated serine protease	97.66
d1szba2	45	Mannose-binding protein associated serine protease	97.65
d1kigl_	51	Factor X, N-terminal module {Cow (Bos taurus) [Tax	97.59
d2p3ua1	51	Factor X, N-terminal module {Human (Homo sapiens)	97.53
d1rfnb_	57	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	97.45
d1nzia2	42	Complement C1S component {Human (Homo sapiens) [Ta	97.37
d1emoa2	39	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	97.29
d1haea_	63	Heregulin-alpha, EGF-like domain {Human (Homo sapi	97.23
d2bz6l1	53	Coagulation factor VIIa {Human (Homo sapiens) [Tax	97.21
d1ijqa2	50	Low density lipoprotein (LDL) receptor, different	97.06
d3bpse1	40	Low density lipoprotein (LDL) receptor, different	97.05
d3egfa_	53	Epidermal growth factor, EGF {Mouse (Mus musculus)	96.99
d1nqlb_	48	Epidermal growth factor, EGF {Human (Homo sapiens)	96.84
d1k36a_	46	Epiregulin, EGF-domain {Human (Homo sapiens) [TaxI	96.66
d1emoa2	39	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	96.62
d1ioxa_	50	Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]	96.34
d1autl2	50	Activated protein c (autoprothrombin IIa) {Human (	96.18
d1kigl_	51	Factor X, N-terminal module {Cow (Bos taurus) [Tax	95.98
d2p3ua1	51	Factor X, N-terminal module {Human (Homo sapiens)	95.97
d1moxc_	49	Transforming growth factor alpha {Human (Homo sapi	95.93
d1moxc_	49	Transforming growth factor alpha {Human (Homo sapi	95.35
d1ioxa_	50	Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]	95.28
d1k36a_	46	Epiregulin, EGF-domain {Human (Homo sapiens) [TaxI	95.28
d1xdtr_	41	Heparin-binding epidermal growth factor, HBEGF {Hu	93.97
d1dx5i1	43	Thrombomodulin, different EGF-like domains {Human	93.89
d2i9aa1	40	Plasminogen activator (urokinase-type) {Human (Hom	93.06
d1rfnb_	57	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	92.29
d1ijqa2	50	Low density lipoprotein (LDL) receptor, different	92.1
d1xdtr_	41	Heparin-binding epidermal growth factor, HBEGF {Hu	90.89
d1dx5i1	43	Thrombomodulin, different EGF-like domains {Human	90.53
d2i9aa1	40	Plasminogen activator (urokinase-type) {Human (Hom	90.3
d1kloa1	55	Laminin gamma1 chain {Mouse (Mus musculus) [TaxId:	89.31
d1l3ya_	41	Integrin beta EGF-like domains {Human (Homo sapien	85.66
d2bz6l1	53	Coagulation factor VIIa {Human (Homo sapiens) [Tax	85.07
d1jv2b4	31	Integrin beta EGF-like domains {Human (Homo sapien	82.26

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.88  E-value=5.4e-10  Score=61.93  Aligned_cols=37  Identities=27%  Similarity=0.906  Sum_probs=32.7

Q ss_pred             cCCCCC-CCCCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCcc
Q psy5752           8 FSLSEC-DTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECN   53 (222)
Q Consensus         8 ~~~~~C-~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~   53 (222)
                      +|+|+| ++||.|+|+|++  .   .++| .|.|++||+|+   .|+
T Consensus         1 id~d~C~~~PC~ngg~C~~--~---~~~y-~C~C~~g~~G~---~Ce   38 (39)
T d1edmb_           1 VDGDQCESNPCLNGGSCKD--D---INSY-ECWCPFGFEGK---NCE   38 (39)
T ss_dssp             CCCCTTTTCCCCTTCEEEE--E---TTEE-EEECCTTCCST---TSC
T ss_pred             CccccCCCCCCCCCcEEEc--C---CCCE-EEECCCCCCCC---CCC
Confidence            589999 999999999998  3   5666 99999999999   775

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.87  E-value=1.2e-09  Score=61.69  Aligned_cols=40  Identities=25%  Similarity=0.759  Sum_probs=33.9

Q ss_pred             ccCCCCCCCCCCCCCCCeeeeCCCCeeEeecCCCCccCCCccc
Q psy5752         123 HPLKSCLEDRSLCGKDASCVVASQGHFHCECNEGFTGNGITCK  165 (222)
Q Consensus       123 ~~id~C~~~~~~C~~~~~C~n~~~g~~~C~C~~G~~gd~~~C~  165 (222)
                      +|||||+..+++|.++++|+|+.++ |+|.|++||+|  .+|+
T Consensus         1 qDideC~~~~~pC~n~g~C~n~~g~-y~C~C~~G~~G--~~Ce   40 (42)
T d2vj3a1           1 QDVDECSLGANPCEHAGKCINTLGS-FECQCLQGYTG--PRCE   40 (42)
T ss_dssp             CCCCTTTSSSCSSSTTCEEEECSSS-EEEECCTTEES--TTSC
T ss_pred             CCCccccCCCCCCCCCcEeECCCCC-EEeECCCCCcC--CCCc
Confidence            3789998767789999999999755 99999999998  5664

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.85  E-value=4.8e-10  Score=63.54  Aligned_cols=43  Identities=23%  Similarity=0.589  Sum_probs=34.3

Q ss_pred             ccccCCCCCCCCCCCCCCCeeeeCCCCeeEeecCCCCccCCCcccc
Q psy5752         121 ECHPLKSCLEDRSLCGKDASCVVASQGHFHCECNEGFTGNGITCKP  166 (222)
Q Consensus       121 ~C~~id~C~~~~~~C~~~~~C~n~~~g~~~C~C~~G~~gd~~~C~~  166 (222)
                      .|.|||||+..+..|  +++|+|++ |+|.|.|++||++++.+|.+
T Consensus         1 sCvDidEC~~~~~~~--~~~C~Nt~-Gsy~C~C~~Gy~~~g~~C~D   43 (43)
T d1emoa1           1 SAVDMDECKEPDVCK--HGQCINTD-GSYRCECPFGYILAGNECVD   43 (43)
T ss_dssp             CCCCCCSSSSTTSCS--SSCCCCCS-SCCCCCCCTTEEESSSCEEE
T ss_pred             CCcceeccCCcCCCC--CCEeECCC-CCeEeECCCCcccCCCcccC
Confidence            377899998665434  56899997 55999999999988777764

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.82  E-value=5.5e-10  Score=61.10  Aligned_cols=36  Identities=22%  Similarity=0.779  Sum_probs=31.8

Q ss_pred             CCCCC-CCCCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCcc
Q psy5752           9 SLSEC-DTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECN   53 (222)
Q Consensus         9 ~~~~C-~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~   53 (222)
                      |+|+| ++||.|+|+|++  .   .++| .|.|++||+|.   .|+
T Consensus         1 D~d~C~~~PC~ngg~C~~--~---~~~y-~C~C~~g~~G~---~Ce   37 (37)
T d2c4fl1           1 DGDQCASSPCQNGGSCKD--Q---LQSY-ICFCLPAFEGR---NCE   37 (37)
T ss_dssp             TCCGGGGCCCCTTCEEEE--E---TTEE-EEECCTTEEST---TSC
T ss_pred             CcccCCCCCCCCCCEEEC--C---CCCe-EEECCCCCcCC---CCC
Confidence            78999 999999999998  3   5666 99999999998   775

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.77  E-value=1.6e-09  Score=61.13  Aligned_cols=37  Identities=32%  Similarity=0.849  Sum_probs=32.5

Q ss_pred             CCCCC---CCCCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCccc
Q psy5752           9 SLSEC---DTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNP   54 (222)
Q Consensus         9 ~~~~C---~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~   54 (222)
                      |||||   ++||.++|+|++.     .++| +|.|++||+|.   .|+.
T Consensus         2 DideC~~~~~pC~n~g~C~n~-----~g~y-~C~C~~G~~G~---~Ce~   41 (42)
T d2vj3a1           2 DVDECSLGANPCEHAGKCINT-----LGSF-ECQCLQGYTGP---RCEI   41 (42)
T ss_dssp             CCCTTTSSSCSSSTTCEEEEC-----SSSE-EEECCTTEEST---TSCE
T ss_pred             CCccccCCCCCCCCCcEeECC-----CCCE-EeECCCCCcCC---CCcC
Confidence            79999   5899999999994     6777 99999999999   8763

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.73  E-value=2.8e-09  Score=58.88  Aligned_cols=36  Identities=39%  Similarity=0.953  Sum_probs=31.7

Q ss_pred             CCCC-CCCCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCccc
Q psy5752          10 LSEC-DTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNP   54 (222)
Q Consensus        10 ~~~C-~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~   54 (222)
                      ||+| ++||+|+|+|++.     .++| .|.|++||+|.   .|+.
T Consensus         1 Id~C~~~PC~n~g~C~~~-----~~~y-~C~C~~G~~G~---~Ce~   37 (39)
T d2vj3a2           1 VNECVSNPCQNDATCLDQ-----IGEF-QCICMPGYEGV---HCEV   37 (39)
T ss_dssp             CCTTTTCCCCSSCEEEEC-----SSCE-EEECCTTEESS---SSCE
T ss_pred             CcCCcCCCCCCCCEEECC-----CCCE-EEeCCCCCccC---cCee
Confidence            6899 9999999999983     5666 99999999999   8864

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.72  E-value=4.3e-09  Score=59.60  Aligned_cols=35  Identities=34%  Similarity=0.975  Sum_probs=30.4

Q ss_pred             cCCCCCCCCCCCCCCCeeeeCCCCeeEeecCCCCccC
Q psy5752         124 PLKSCLEDRSLCGKDASCVVASQGHFHCECNEGFTGN  160 (222)
Q Consensus       124 ~id~C~~~~~~C~~~~~C~n~~~g~~~C~C~~G~~gd  160 (222)
                      |||||+..++.|. +++|+|++ |+|+|.|++||+++
T Consensus         2 DidEC~~~~~~C~-~~~C~Nt~-Gsy~C~C~~Gy~~~   36 (44)
T d1lmja1           2 DIDECRISPDLCG-RGQCVNTP-GDFECKCDEGYESG   36 (44)
T ss_dssp             CCCTTTTCSSTTT-TSCEEEET-TEEEECCCSSEEEC
T ss_pred             cccccCCCCCCCC-CCEeEcCC-CCeEEeCCCCCccC
Confidence            7899988888886 47899997 66999999999975

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.69  E-value=3.3e-09  Score=59.68  Aligned_cols=39  Identities=31%  Similarity=0.735  Sum_probs=31.8

Q ss_pred             cCCCCCCCCCCCCCCCeeeeCCCCeeEeecCCCCcc--CCCcc
Q psy5752         124 PLKSCLEDRSLCGKDASCVVASQGHFHCECNEGFTG--NGITC  164 (222)
Q Consensus       124 ~id~C~~~~~~C~~~~~C~n~~~g~~~C~C~~G~~g--d~~~C  164 (222)
                      |||||+..++.|. ++.|+|++ |+|+|.|++||+.  ++++|
T Consensus         1 DidEC~~~~~~C~-~~~C~Nt~-Gsy~C~C~~Gy~l~~d~~~C   41 (42)
T d1lmja2           1 DIDECQRDPLLCR-GGVCHNTE-GSYRCECPPGHQLSPNISAC   41 (42)
T ss_dssp             ECCHHHHCSSTTT-TSEEEEET-TEEEEESCTTSCCCSSSCCC
T ss_pred             CccccCCCCCCCC-CCEeECCC-CCeEEeCCCCCeECcCCCcc
Confidence            6899988888896 57999997 6699999999994  44444

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.69  E-value=4.1e-09  Score=59.59  Aligned_cols=42  Identities=29%  Similarity=0.680  Sum_probs=33.7

Q ss_pred             CccCCCCC-CCCCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCccc
Q psy5752           6 IRFSLSEC-DTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNP   54 (222)
Q Consensus         6 ~~~~~~~C-~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~   54 (222)
                      +|+||||| ..++..++.|+|  +   .|+| .|.|++||++++. .|.+
T Consensus         1 sCvDidEC~~~~~~~~~~C~N--t---~Gsy-~C~C~~Gy~~~g~-~C~D   43 (43)
T d1emoa1           1 SAVDMDECKEPDVCKHGQCIN--T---DGSY-RCECPFGYILAGN-ECVD   43 (43)
T ss_dssp             CCCCCCSSSSTTSCSSSCCCC--C---SSCC-CCCCCTTEEESSS-CEEE
T ss_pred             CCcceeccCCcCCCCCCEeEC--C---CCCe-EeECCCCcccCCC-cccC
Confidence            48999999 555556789999  4   7888 9999999997665 6653

>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-like domain of nidogen-1
domain: EGF-like domain of nidogen-1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.63  E-value=2.2e-09  Score=59.51  Aligned_cols=36  Identities=33%  Similarity=0.757  Sum_probs=30.7

Q ss_pred             CCCCCCCCCCeeeeCCCCeeEeecCCCCccCCCcccc
Q psy5752         130 EDRSLCGKDASCVVASQGHFHCECNEGFTGNGITCKP  166 (222)
Q Consensus       130 ~~~~~C~~~~~C~n~~~g~~~C~C~~G~~gd~~~C~~  166 (222)
                      .+.+.|+.++.|+|++ |+|.|.|.+||.|||..|.+
T Consensus         4 ~~~~~C~~~A~C~Nt~-Gsy~C~C~~Gy~GdG~~C~~   39 (40)
T d1gl4a2           4 NNRHQCSVHAECRDYA-TGFCCRCVANYTGNGRQCVA   39 (40)
T ss_dssp             HHGGGSCTTEEEEECS-SCEEEEECTTEEECSSSEEE
T ss_pred             CCCCCCCCCCEeecCC-CCeEeECCCCCcCCCCEeeC
Confidence            3456698899999997 55999999999999998874

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.63  E-value=8.7e-09  Score=56.18  Aligned_cols=36  Identities=25%  Similarity=0.605  Sum_probs=30.9

Q ss_pred             cCCCCCCCCCCCCCCCeeeeCCCCeeEeecCCCCccCCCcc
Q psy5752         124 PLKSCLEDRSLCGKDASCVVASQGHFHCECNEGFTGNGITC  164 (222)
Q Consensus       124 ~id~C~~~~~~C~~~~~C~n~~~g~~~C~C~~G~~gd~~~C  164 (222)
                      |+|+|..+|  |.++++|++.. ++|+|.|++||+|  ..|
T Consensus         1 D~d~C~~~P--C~ngg~C~~~~-~~y~C~C~~g~~G--~~C   36 (37)
T d2c4fl1           1 DGDQCASSP--CQNGGSCKDQL-QSYICFCLPAFEG--RNC   36 (37)
T ss_dssp             TCCGGGGCC--CCTTCEEEEET-TEEEEECCTTEES--TTS
T ss_pred             CcccCCCCC--CCCCCEEECCC-CCeEEECCCCCcC--CCC
Confidence            578998766  99999999986 5599999999998  555

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.62  E-value=1.2e-08  Score=56.25  Aligned_cols=35  Identities=29%  Similarity=0.875  Sum_probs=30.7

Q ss_pred             CCC-CCCCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCccc
Q psy5752          11 SEC-DTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNP   54 (222)
Q Consensus        11 ~~C-~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~   54 (222)
                      |+| ++||+|+|+|++.     .++| .|.|++||+|.   .|+.
T Consensus         1 D~C~~~PC~ngg~C~~~-----~~~y-~C~C~~G~~G~---~Cei   36 (39)
T d1xkba1           1 DQCETSPCQNQGKCKDG-----LGEY-TCTCLEGFEGK---NCEL   36 (39)
T ss_dssp             CTTTTCCCCSSCEECCC-----SSSC-CEECCTTEETT---TTCE
T ss_pred             CcCCCCCCCCCcEEECC-----CCCE-EEECCCCCCcC---cCeE
Confidence            689 9999999999993     5666 99999999999   8874

>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement protease C1R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.61  E-value=2.2e-08  Score=59.34  Aligned_cols=42  Identities=19%  Similarity=0.559  Sum_probs=30.1

Q ss_pred             cCCCCCCCCCCCCC------CCeeeeCCCCeeEeecCCCCc--cCCCcccc
Q psy5752         124 PLKSCLEDRSLCGK------DASCVVASQGHFHCECNEGFT--GNGITCKP  166 (222)
Q Consensus       124 ~id~C~~~~~~C~~------~~~C~n~~~g~~~C~C~~G~~--gd~~~C~~  166 (222)
                      |||||+...+.|..      ...|+|++ |+|+|.|++||+  .|+++|+.
T Consensus         3 DidEC~~~~~~c~~~~~~~c~~~C~Nt~-GsY~C~C~~Gy~l~~d~~tC~~   52 (53)
T d1apqa_           3 DLDECASRSKSGEEDPQPQCQHLCHNYV-GGYFCSCRPGYELQEDRHSCQA   52 (53)
T ss_dssp             SCCTTTCSTTTCCCSSSCTTSSEEEEET-TEEEEECSTTCEECTTSSCEEC
T ss_pred             ecccccCCCCCcccCCCCCccCEeEcCC-CCeEeECCCCCeECCCCCceec
Confidence            56666655444432      34899997 669999999999  57777764

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.61  E-value=1.7e-08  Score=55.67  Aligned_cols=37  Identities=27%  Similarity=0.650  Sum_probs=31.4

Q ss_pred             cCCCCCCCCCCCCCCCeeeeCCCCeeEeecCCCCccCCCccc
Q psy5752         124 PLKSCLEDRSLCGKDASCVVASQGHFHCECNEGFTGNGITCK  165 (222)
Q Consensus       124 ~id~C~~~~~~C~~~~~C~n~~~g~~~C~C~~G~~gd~~~C~  165 (222)
                      |+|+|..+|  |.++++|++.. ++|+|.|++||+|  ..|+
T Consensus         2 d~d~C~~~P--C~ngg~C~~~~-~~y~C~C~~g~~G--~~Ce   38 (39)
T d1edmb_           2 DGDQCESNP--CLNGGSCKDDI-NSYECWCPFGFEG--KNCE   38 (39)
T ss_dssp             CCCTTTTCC--CCTTCEEEEET-TEEEEECCTTCCS--TTSC
T ss_pred             ccccCCCCC--CCCCcEEEcCC-CCEEEECCCCCCC--CCCC
Confidence            678998766  99999999986 5599999999998  5554

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.60  E-value=2.4e-08  Score=54.99  Aligned_cols=36  Identities=31%  Similarity=0.970  Sum_probs=30.8

Q ss_pred             CCCCCCCCCCCCCCCeeeeCCCCeeEeecCCCCccCCCccc
Q psy5752         125 LKSCLEDRSLCGKDASCVVASQGHFHCECNEGFTGNGITCK  165 (222)
Q Consensus       125 id~C~~~~~~C~~~~~C~n~~~g~~~C~C~~G~~gd~~~C~  165 (222)
                      ||+|..+|  |.++++|++..+ +|+|.|++||+|  ..|+
T Consensus         1 Id~C~~~P--C~n~g~C~~~~~-~y~C~C~~G~~G--~~Ce   36 (39)
T d2vj3a2           1 VNECVSNP--CQNDATCLDQIG-EFQCICMPGYEG--VHCE   36 (39)
T ss_dssp             CCTTTTCC--CCSSCEEEECSS-CEEEECCTTEES--SSSC
T ss_pred             CcCCcCCC--CCCCCEEECCCC-CEEEeCCCCCcc--CcCe
Confidence            68898766  999999999874 599999999999  6665

>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.60  E-value=1.1e-08  Score=55.09  Aligned_cols=34  Identities=38%  Similarity=0.964  Sum_probs=29.5

Q ss_pred             CCC-CCCCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCcc
Q psy5752          11 SEC-DTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECN   53 (222)
Q Consensus        11 ~~C-~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~   53 (222)
                      |+| ++||+|+|+|++.     .++| +|.|++||+|.   .||
T Consensus         1 d~C~~~PC~ngg~C~~~-----~~~y-~C~C~~g~~G~---~CE   35 (35)
T d2vj3a3           1 DECASSPCLHNGRCLDK-----INEF-QCECPTGFTGH---LCQ   35 (35)
T ss_dssp             CTTTTCCSTTTCEEEEC-----SSCE-EEECCTTEESS---SSC
T ss_pred             CCCCCCCCCCCcEEECC-----CCCe-EEECCCCCCCC---CcC
Confidence            689 9999999999983     5566 99999999999   775

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.55  E-value=8.9e-09  Score=58.18  Aligned_cols=40  Identities=28%  Similarity=0.752  Sum_probs=31.6

Q ss_pred             ccCCCCCCCCCCCCCCCeeeeCCCCeeEeecCCCCcc--CCCcc
Q psy5752         123 HPLKSCLEDRSLCGKDASCVVASQGHFHCECNEGFTG--NGITC  164 (222)
Q Consensus       123 ~~id~C~~~~~~C~~~~~C~n~~~g~~~C~C~~G~~g--d~~~C  164 (222)
                      +|||||+..++.|. .++|+|++ |+|+|.|++||+.  ++++|
T Consensus         1 qDinEC~~~~~~c~-~~~C~Nt~-Gsy~C~C~~Gy~l~~~~~~C   42 (43)
T d1uzka2           1 EDIDECQELPGLCQ-GGKCINTF-GSFQCRCPTGYYLNEDTRVC   42 (43)
T ss_dssp             EECCHHHHCGGGGB-TSEEEECS-SCEEEECCTTCCBCTTTCBB
T ss_pred             CCcccccCCCCCcC-CCEEECCC-CCeEeECCCCCeECcCCCcc
Confidence            37899987778886 46999998 5599999999984  44555

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.54  E-value=2.4e-08  Score=56.39  Aligned_cols=40  Identities=23%  Similarity=0.673  Sum_probs=30.6

Q ss_pred             cCCCCCCCCCCCCCCCeeeeCCCCeeEeecCCCCcc--CCCcccc
Q psy5752         124 PLKSCLEDRSLCGKDASCVVASQGHFHCECNEGFTG--NGITCKP  166 (222)
Q Consensus       124 ~id~C~~~~~~C~~~~~C~n~~~g~~~C~C~~G~~g--d~~~C~~  166 (222)
                      |||||+..++.|  .+.|+|++ |+|+|.|++||..  +++.|.+
T Consensus         2 DidEC~~~~~~c--~~~C~Nt~-G~y~C~C~~Gy~l~~d~~~C~D   43 (43)
T d1uzka1           2 DVNECLDPTTCI--SGNCVNTP-GSYICDCPPDFELNPTRVGCVD   43 (43)
T ss_dssp             CCCGGGSTTSSB--TSEEEEET-TEEEEECCTTCEECTTSSBEEC
T ss_pred             CccccCCCCcCc--CCEeECCC-CCEEEecCCCCEECCCCCcccC
Confidence            789998755444  46999997 5699999999984  4566653

>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.46  E-value=5.9e-08  Score=54.09  Aligned_cols=39  Identities=33%  Similarity=0.910  Sum_probs=31.2

Q ss_pred             CCCCCCCCCCCCCCCeeeeCCCCeeEeecCCCCc--cCCCccccC
Q psy5752         125 LKSCLEDRSLCGKDASCVVASQGHFHCECNEGFT--GNGITCKPV  167 (222)
Q Consensus       125 id~C~~~~~~C~~~~~C~n~~~g~~~C~C~~G~~--gd~~~C~~~  167 (222)
                      ||||+. ++.|.+  .|+|+. |+|+|.|++||+  .|+++|+++
T Consensus         1 idEC~~-~~~C~~--~C~n~~-Gsy~C~C~~Gy~L~~d~~~C~ai   41 (41)
T d1i0ua2           1 IDECQD-PDTCSQ--LCVNLE-GGYKCQCEEGFQLDPHTKACKAV   41 (41)
T ss_dssp             CCTTTT-TTSCSS--CEECSS-SCCEECCCTTEEECTTTCCEEEC
T ss_pred             CccCCC-CCCCCC--EeECCC-CCEEeECCCCCeECCCCCccccC
Confidence            688874 567965  899997 559999999999  467888764

>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.44  E-value=1.7e-08  Score=56.02  Aligned_cols=37  Identities=27%  Similarity=0.724  Sum_probs=31.9

Q ss_pred             CCC-CCCCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCcccCC
Q psy5752          11 SEC-DTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPES   56 (222)
Q Consensus        11 ~~C-~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~~~   56 (222)
                      +.| ++||.|+|+|++.     .++| .|.|++||+|.   .|+.+.
T Consensus         2 ~~C~~~pC~ngg~C~~~-----~~~y-~C~C~~g~~G~---~Ce~~~   39 (40)
T d1g1sa2           2 ASCQDMSCSKQGECLET-----IGNY-TCSCYPGFYGP---ECEYVR   39 (40)
T ss_dssp             CCCCTTGGGGSEEEEEC-----SSSE-EEEECTTEEST---TSCEEC
T ss_pred             CcccCCcCCCCcEEECC-----CCCe-EEeCCCCccCC---CCCCCc
Confidence            679 8999999999983     5666 99999999999   888654

>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.44  E-value=6.8e-08  Score=55.02  Aligned_cols=40  Identities=28%  Similarity=0.662  Sum_probs=27.8

Q ss_pred             CCCCCCCCCC---CCCCCeeeeCCCCeeEeecCCCCc--cCCCccccC
Q psy5752         125 LKSCLEDRSL---CGKDASCVVASQGHFHCECNEGFT--GNGITCKPV  167 (222)
Q Consensus       125 id~C~~~~~~---C~~~~~C~n~~~g~~~C~C~~G~~--gd~~~C~~~  167 (222)
                      ||||+..++.   |  .+.|+|++ |+|+|.|++||.  .|+++|+.+
T Consensus         1 IdEC~~~~~~~~~C--~~~C~Nt~-gsy~C~C~~Gy~L~~d~~tC~~i   45 (45)
T d1nt0a3           1 VDECRTSLGDSVPC--DHYCHNYL-GGYYCSCRVGYILHQNKHTCSAL   45 (45)
T ss_dssp             CCTTC-------CC--SSEEEEET-TEEEEECCTTEEECTTSSCEEEC
T ss_pred             CcCCccCCCCcCCC--CCEeecCC-CCEEEeCCCCCEECCCCCccccC
Confidence            5778654433   5  45899997 669999999998  577888753

>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.41  E-value=1.6e-07  Score=50.41  Aligned_cols=34  Identities=35%  Similarity=0.929  Sum_probs=28.5

Q ss_pred             CCCCCCCCCCCCCCeeeeCCCCeeEeecCCCCccCCCcc
Q psy5752         126 KSCLEDRSLCGKDASCVVASQGHFHCECNEGFTGNGITC  164 (222)
Q Consensus       126 d~C~~~~~~C~~~~~C~n~~~g~~~C~C~~G~~gd~~~C  164 (222)
                      |+|..+|  |.++++|++..+ +|+|.|++||+|  ..|
T Consensus         1 d~C~~~P--C~ngg~C~~~~~-~y~C~C~~g~~G--~~C   34 (35)
T d2vj3a3           1 DECASSP--CLHNGRCLDKIN-EFQCECPTGFTG--HLC   34 (35)
T ss_dssp             CTTTTCC--STTTCEEEECSS-CEEEECCTTEES--SSS
T ss_pred             CCCCCCC--CCCCcEEECCCC-CeEEECCCCCCC--CCc
Confidence            5787665  999999999875 499999999998  555

>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.40  E-value=1.6e-08  Score=55.83  Aligned_cols=36  Identities=25%  Similarity=0.796  Sum_probs=31.0

Q ss_pred             CCC-CCCCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCcccC
Q psy5752          11 SEC-DTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPE   55 (222)
Q Consensus        11 ~~C-~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~~   55 (222)
                      ++| ++||.|+|+|++  .   .+.| .|.|++||+|+   .|+.+
T Consensus         2 ~~C~~~pC~ngg~C~~--~---~~~~-~C~C~~g~~G~---~Ce~~   38 (39)
T d1g1ta2           2 AACTNTSCSGHGECVE--T---INNY-TCKCDPGFSGL---KCEQI   38 (39)
T ss_dssp             CCCCTTGGGGSEEEEE--E---TTEE-EEEECTTEEST---TSCEE
T ss_pred             CcccCCcCCCCcEEEC--C---CCCE-EEeCCCCCcCc---CcCcc
Confidence            689 899999999998  3   5666 99999999999   88753

>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (tissue-type), t-PA
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.40  E-value=1.2e-07  Score=52.84  Aligned_cols=38  Identities=21%  Similarity=0.642  Sum_probs=30.5

Q ss_pred             C-CCCCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCcccCCC
Q psy5752          13 C-DTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPESL   57 (222)
Q Consensus        13 C-~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~~~~   57 (222)
                      | ++||.|+|+|+....   ...| .|.|++||+|.   .|+...+
T Consensus         1 C~~nPC~ngG~C~~~~~---~~~y-~C~C~~g~~G~---~Ce~~~~   39 (41)
T d1tpga1           1 CSEPRCFNGGTCQQALY---FSDF-VCQCPEGFAGK---SCEIDTR   39 (41)
T ss_dssp             CSSCCSCTTCEEEEESS---SSCE-EEECCTTCBSS---SCCBCSS
T ss_pred             CcCCCCCCCCEEecCCC---CCCe-EECCCCCCCCC---CcCcCcC
Confidence            5 789999999997432   3455 99999999999   9986543

>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.37  E-value=1.6e-07  Score=53.48  Aligned_cols=41  Identities=27%  Similarity=0.575  Sum_probs=29.9

Q ss_pred             CCCCCCCCCCC-CCCCeeeeCCCCeeEeecCCCCc--cCCCcccc
Q psy5752         125 LKSCLEDRSLC-GKDASCVVASQGHFHCECNEGFT--GNGITCKP  166 (222)
Q Consensus       125 id~C~~~~~~C-~~~~~C~n~~~g~~~C~C~~G~~--gd~~~C~~  166 (222)
                      ||||+..++.+ .-.+.|+|++ |+|+|.|++||.  .|+++|.+
T Consensus         1 IdEC~~~~~~~~~C~~~C~Nt~-Gsy~C~C~~Gy~l~~d~~tC~D   44 (45)
T d1szba2           1 IDECQVAPGEAPTCDHHCHNHL-GGFYCSCRAGYVLHRNKRTCSE   44 (45)
T ss_dssp             CCTTCCCTTSCCSSSSEEEEET-TEEEEECCTTEEECTTSSCEEE
T ss_pred             CcCCcCCCCCCCCCCCCCccCC-CCeEEECCCCCeECCCCCCccC
Confidence            57786654422 1245899997 669999999999  57777875

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.34  E-value=1.4e-07  Score=51.77  Aligned_cols=35  Identities=29%  Similarity=0.806  Sum_probs=29.5

Q ss_pred             CCCCCCCCCCCCCCeeeeCCCCeeEeecCCCCccCCCccc
Q psy5752         126 KSCLEDRSLCGKDASCVVASQGHFHCECNEGFTGNGITCK  165 (222)
Q Consensus       126 d~C~~~~~~C~~~~~C~n~~~g~~~C~C~~G~~gd~~~C~  165 (222)
                      |+|+.+|  |.++++|++..++ |+|.|++||+|  ..|+
T Consensus         1 D~C~~~P--C~ngg~C~~~~~~-y~C~C~~G~~G--~~Ce   35 (39)
T d1xkba1           1 DQCETSP--CQNQGKCKDGLGE-YTCTCLEGFEG--KNCE   35 (39)
T ss_dssp             CTTTTCC--CCSSCEECCCSSS-CCEECCTTEET--TTTC
T ss_pred             CcCCCCC--CCCCcEEECCCCC-EEEECCCCCCc--CcCe
Confidence            5787665  9999999998755 99999999999  6665

>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-like domain of nidogen-1
domain: EGF-like domain of nidogen-1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.31  E-value=1e-07  Score=52.64  Aligned_cols=33  Identities=36%  Similarity=0.984  Sum_probs=29.4

Q ss_pred             CCCCCCCEeeecCCCCCeEEecCCCCccCCCeeec
Q psy5752          63 KNCHANAECVYNATSAGYRCQCAQGYVGNGVECHP   97 (222)
Q Consensus        63 ~~C~~~~~C~~~n~~g~~~C~C~~G~~~~~~~C~~   97 (222)
                      +.|..++.|+  |++|+|.|+|++||.|++..|.+
T Consensus         7 ~~C~~~A~C~--Nt~Gsy~C~C~~Gy~GdG~~C~~   39 (40)
T d1gl4a2           7 HQCSVHAECR--DYATGFCCRCVANYTGNGRQCVA   39 (40)
T ss_dssp             GGSCTTEEEE--ECSSCEEEEECTTEEECSSSEEE
T ss_pred             CCCCCCCEee--cCCCCeEeECCCCCcCCCCEeeC
Confidence            6788899997  99999999999999999987753

>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=98.30  E-value=8.6e-08  Score=53.66  Aligned_cols=37  Identities=27%  Similarity=0.734  Sum_probs=30.6

Q ss_pred             CCCC-CCCCCCCCeecCCCCCCCCCCceeeecCC-CCccCCCCCccc
Q psy5752          10 LSEC-DTPCHPNAQCTSPDEFNESREQAKCICNF-GYTGDGVTECNP   54 (222)
Q Consensus        10 ~~~C-~~~C~~~~~C~~~~~~~~~g~~~~C~C~~-G~~g~~~~~C~~   54 (222)
                      ||+| ++||+|+|+|++..    .++| .|.|++ ||+|.   .|+.
T Consensus         2 id~C~~nPC~ngG~C~~~~----~~~y-~C~C~~~G~~G~---~Ce~   40 (42)
T d1q4ga2           2 VNPCCYYPCQHQGICVRFG----LDRY-QCDCTRTGYSGP---NCTI   40 (42)
T ss_dssp             CCGGGGCCCCTTCEEEEET----TTEE-EEECTTSSEETT---TTCE
T ss_pred             CccCcCCCCCCCCEeeeCC----CCCE-EEECCCCCcCCc---CcCc
Confidence            7899 99999999998732    3455 999986 99999   8874

>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.30  E-value=6.4e-08  Score=53.29  Aligned_cols=33  Identities=21%  Similarity=0.578  Sum_probs=26.8

Q ss_pred             cCCCCCCCCCCCCCCCeeeeCCCCeeEeecCCCCccC
Q psy5752         124 PLKSCLEDRSLCGKDASCVVASQGHFHCECNEGFTGN  160 (222)
Q Consensus       124 ~id~C~~~~~~C~~~~~C~n~~~g~~~C~C~~G~~gd  160 (222)
                      |||||+. ++.|.+  .|+|++ |+|+|.|++||++.
T Consensus         1 DidEC~~-~~~C~~--~C~N~~-Gsy~C~C~~Gy~l~   33 (40)
T d1dx5i3           1 DIDECEN-GGFCSG--VCHNLP-GTFECICGPDSALA   33 (40)
T ss_dssp             ECCHHHH-CSSCSS--EEEECS-SSEEEEECSSSSCE
T ss_pred             CccccCC-CcCccC--EeeCCC-CCeEeECCCCCeeC
Confidence            5888975 477964  899997 55999999999963

>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.26  E-value=2.9e-07  Score=52.81  Aligned_cols=39  Identities=23%  Similarity=0.480  Sum_probs=32.2

Q ss_pred             cCCCCC-CCCCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCcccCC
Q psy5752           8 FSLSEC-DTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPES   56 (222)
Q Consensus         8 ~~~~~C-~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~~~   56 (222)
                      ...++| ++||.| |+|++.     .++| .|.|++||+|+   .|+...
T Consensus         6 p~~~~C~~~PC~n-G~C~~~-----~~~y-~C~C~~G~~G~---~Ce~~I   45 (48)
T d1autl1           6 PLEHPCASLCCGH-GTCIDG-----IGSF-SCDCRSGWEGR---FCQREV   45 (48)
T ss_dssp             SSCCSSSSTTTTS-EEECCC-----SSCC-CEEECTTEEST---TSCEEC
T ss_pred             CCCCcccCCCCCC-CEEECC-----CCCC-eEeCCCCCcCC---Cccccc
Confidence            357899 999987 899984     5667 99999999999   887543

>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.22  E-value=3.6e-07  Score=50.44  Aligned_cols=37  Identities=27%  Similarity=0.741  Sum_probs=30.1

Q ss_pred             CCCCCCCCCCCCCCCeeeeCCCCeeEeecCCCCcc-CCCcc
Q psy5752         125 LKSCLEDRSLCGKDASCVVASQGHFHCECNEGFTG-NGITC  164 (222)
Q Consensus       125 id~C~~~~~~C~~~~~C~n~~~g~~~C~C~~G~~g-d~~~C  164 (222)
                      +|||+..++.|++  .|+|++++ |+|.|++||.. |+++|
T Consensus         2 ~neC~~~nggC~h--~C~n~~g~-~~C~C~~Gy~L~d~~tC   39 (40)
T d3bpse1           2 TNECLDNNGGCSH--VCNDLKIG-YECLCPDGFQLVAQRRC   39 (40)
T ss_dssp             SCGGGTGGGGCSS--EEEECSSS-EEEECCTTCCEETTTEE
T ss_pred             cccCCCCCCCCcC--EEEcCCCC-EEEECCCCCEECCCCcC
Confidence            5789888888975  89999854 99999999984 55555

>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement C1S component
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.13  E-value=1.4e-06  Score=48.46  Aligned_cols=38  Identities=18%  Similarity=0.527  Sum_probs=29.5

Q ss_pred             CCCCC-CCCCCCCCCeeeeCCCCeeEeecCCCCc--cCCCcccc
Q psy5752         126 KSCLE-DRSLCGKDASCVVASQGHFHCECNEGFT--GNGITCKP  166 (222)
Q Consensus       126 d~C~~-~~~~C~~~~~C~n~~~g~~~C~C~~G~~--gd~~~C~~  166 (222)
                      |||+. ..+.|.+  .|+|++ |+|+|.|++||.  .|+++|..
T Consensus         1 dEC~~~~~~~C~~--~C~n~~-Gsy~C~C~~Gy~L~~d~~tC~~   41 (42)
T d1nzia2           1 NECTDFVDVPCSH--FCNNFI-GGYFCSCPPEYFLHDDMKNCGV   41 (42)
T ss_dssp             CTTTC-CCCCSSS--EEEEET-TEEEEECCTTCEECTTSSCEEC
T ss_pred             CCCCCCCCcCCCC--EeecCC-CCEEEeCCCCCEECCCCCeecC
Confidence            57764 3467965  899997 669999999999  57777864

>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.13  E-value=3.6e-07  Score=50.74  Aligned_cols=36  Identities=31%  Similarity=0.905  Sum_probs=29.6

Q ss_pred             CCC-CCCCCCCCeecCCCCCCCCCCceeeecC-CCCccCCCCCccc
Q psy5752          11 SEC-DTPCHPNAQCTSPDEFNESREQAKCICN-FGYTGDGVTECNP   54 (222)
Q Consensus        11 ~~C-~~~C~~~~~C~~~~~~~~~g~~~~C~C~-~G~~g~~~~~C~~   54 (222)
                      |+| ++||+|+|+|++..    .++| .|.|+ +||+|.   .|+.
T Consensus         2 d~C~~~PC~ngG~C~~~~----~~~y-~C~C~~~gy~G~---~Ce~   39 (41)
T d1cvua2           2 NPCCSNPCQNRGECMSTG----FDQY-KCDCTRTGFYGE---NCTT   39 (41)
T ss_dssp             CTTTTCCCCTTCEEEEEE----TTEE-EEECTTSSEETT---TTCE
T ss_pred             CcCcCCCCCCCCEEEECC----CCCE-EEeCcCCCcCCc---CcCc
Confidence            789 99999999998742    3455 99996 699999   8874

>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.12  E-value=6.3e-07  Score=49.45  Aligned_cols=37  Identities=32%  Similarity=0.830  Sum_probs=29.8

Q ss_pred             CCCCCCCCCCCCCCeeeeCCCCeeEeecCCCCccCCCccccC
Q psy5752         126 KSCLEDRSLCGKDASCVVASQGHFHCECNEGFTGNGITCKPV  167 (222)
Q Consensus       126 d~C~~~~~~C~~~~~C~n~~~g~~~C~C~~G~~gd~~~C~~~  167 (222)
                      +.|..+|  |.++++|++..++ |+|.|++||.|  ..|+.+
T Consensus         2 ~~C~~~p--C~ngg~C~~~~~~-y~C~C~~g~~G--~~Ce~~   38 (40)
T d1g1sa2           2 ASCQDMS--CSKQGECLETIGN-YTCSCYPGFYG--PECEYV   38 (40)
T ss_dssp             CCCCTTG--GGGSEEEEECSSS-EEEEECTTEES--TTSCEE
T ss_pred             CcccCCc--CCCCcEEECCCCC-eEEeCCCCccC--CCCCCC
Confidence            4566555  9999999999755 99999999999  677654

>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=98.08  E-value=1.4e-06  Score=48.59  Aligned_cols=37  Identities=24%  Similarity=0.807  Sum_probs=30.0

Q ss_pred             CCCCCCCCCCCCCCCeeeeCCCCeeEeecCC-CCccCCCccc
Q psy5752         125 LKSCLEDRSLCGKDASCVVASQGHFHCECNE-GFTGNGITCK  165 (222)
Q Consensus       125 id~C~~~~~~C~~~~~C~n~~~g~~~C~C~~-G~~gd~~~C~  165 (222)
                      ||+|..+|  |.++++|++...++|+|.|++ ||+|  ..|+
T Consensus         2 id~C~~nP--C~ngG~C~~~~~~~y~C~C~~~G~~G--~~Ce   39 (42)
T d1q4ga2           2 VNPCCYYP--CQHQGICVRFGLDRYQCDCTRTGYSG--PNCT   39 (42)
T ss_dssp             CCGGGGCC--CCTTCEEEEETTTEEEEECTTSSEET--TTTC
T ss_pred             CccCcCCC--CCCCCEeeeCCCCCEEEECCCCCcCC--cCcC
Confidence            67888766  999999997644669999986 9998  6665

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.07  E-value=4.9e-07  Score=50.88  Aligned_cols=33  Identities=27%  Similarity=0.750  Sum_probs=27.7

Q ss_pred             cCCCCC---CCCCCCCCeecCCCCCCCCCCceeeecCCCCccC
Q psy5752           8 FSLSEC---DTPCHPNAQCTSPDEFNESREQAKCICNFGYTGD   47 (222)
Q Consensus         8 ~~~~~C---~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~   47 (222)
                      +|||||   +.+|. ++.|+|  +   .|+| .|.|++||+++
T Consensus         1 TDidEC~~~~~~C~-~~~C~N--t---~Gsy-~C~C~~Gy~~~   36 (44)
T d1lmja1           1 TDIDECRISPDLCG-RGQCVN--T---PGDF-ECKCDEGYESG   36 (44)
T ss_dssp             CCCCTTTTCSSTTT-TSCEEE--E---TTEE-EECCCSSEEEC
T ss_pred             CcccccCCCCCCCC-CCEeEc--C---CCCe-EEeCCCCCccC
Confidence            589999   45676 589999  5   7888 99999999876

>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.03  E-value=2.1e-06  Score=47.56  Aligned_cols=36  Identities=31%  Similarity=0.853  Sum_probs=27.3

Q ss_pred             CCCCCCCCCCCCEeeecCCCCCeEEecCCCCcc--CCCeeec
Q psy5752          58 GCNVVKNCHANAECVYNATSAGYRCQCAQGYVG--NGVECHP   97 (222)
Q Consensus        58 ~C~~~~~C~~~~~C~~~n~~g~~~C~C~~G~~~--~~~~C~~   97 (222)
                      ||+..++|  .+.|+  |++|+|+|.|++||+.  ++.+|++
T Consensus         3 EC~~~~~C--~~~C~--n~~Gsy~C~C~~Gy~L~~d~~~C~a   40 (41)
T d1i0ua2           3 ECQDPDTC--SQLCV--NLEGGYKCQCEEGFQLDPHTKACKA   40 (41)
T ss_dssp             TTTTTTSC--SSCEE--CSSSCCEECCCTTEEECTTTCCEEE
T ss_pred             cCCCCCCC--CCEeE--CCCCCEEeECCCCCeECCCCCcccc
Confidence            47655677  45897  9999999999999983  4555544

>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.02  E-value=7.3e-07  Score=48.90  Aligned_cols=36  Identities=28%  Similarity=0.969  Sum_probs=29.2

Q ss_pred             CCCCCCCCCCCCCCeeeeCCCCeeEeecCCCCccCCCcccc
Q psy5752         126 KSCLEDRSLCGKDASCVVASQGHFHCECNEGFTGNGITCKP  166 (222)
Q Consensus       126 d~C~~~~~~C~~~~~C~n~~~g~~~C~C~~G~~gd~~~C~~  166 (222)
                      +.|..+|  |.++++|++.. ++|+|.|++||+|  ..|+.
T Consensus         2 ~~C~~~p--C~ngg~C~~~~-~~~~C~C~~g~~G--~~Ce~   37 (39)
T d1g1ta2           2 AACTNTS--CSGHGECVETI-NNYTCKCDPGFSG--LKCEQ   37 (39)
T ss_dssp             CCCCTTG--GGGSEEEEEET-TEEEEEECTTEES--TTSCE
T ss_pred             CcccCCc--CCCCcEEECCC-CCEEEeCCCCCcC--cCcCc
Confidence            4576655  99999999986 5599999999999  66653

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.96  E-value=1.1e-06  Score=49.01  Aligned_cols=32  Identities=22%  Similarity=0.569  Sum_probs=26.5

Q ss_pred             CCCCC---CCCCCCCCeecCCCCCCCCCCceeeecCCCCccC
Q psy5752           9 SLSEC---DTPCHPNAQCTSPDEFNESREQAKCICNFGYTGD   47 (222)
Q Consensus         9 ~~~~C---~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~   47 (222)
                      |||||   +..|. ++.|+|  +   .|+| .|.|++||+..
T Consensus         1 DidEC~~~~~~C~-~~~C~N--t---~Gsy-~C~C~~Gy~l~   35 (42)
T d1lmja2           1 DIDECQRDPLLCR-GGVCHN--T---EGSY-RCECPPGHQLS   35 (42)
T ss_dssp             ECCHHHHCSSTTT-TSEEEE--E---TTEE-EEESCTTSCCC
T ss_pred             CccccCCCCCCCC-CCEeEC--C---CCCe-EEeCCCCCeEC
Confidence            68999   56675 689999  5   7888 99999999843

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.91  E-value=3.6e-06  Score=47.13  Aligned_cols=34  Identities=26%  Similarity=0.642  Sum_probs=25.2

Q ss_pred             cCCCCCCCCCCCCCCCEeeecCCCCCeEEecCCCCccC
Q psy5752          54 PESLGCNVVKNCHANAECVYNATSAGYRCQCAQGYVGN   91 (222)
Q Consensus        54 ~~~~~C~~~~~C~~~~~C~~~n~~g~~~C~C~~G~~~~   91 (222)
                      +++ ||+....+ .++.|+  |++|+|+|.|++||...
T Consensus         2 Did-EC~~~~~~-c~~~C~--Nt~G~y~C~C~~Gy~l~   35 (43)
T d1uzka1           2 DVN-ECLDPTTC-ISGNCV--NTPGSYICDCPPDFELN   35 (43)
T ss_dssp             CCC-GGGSTTSS-BTSEEE--EETTEEEEECCTTCEEC
T ss_pred             Ccc-ccCCCCcC-cCCEeE--CCCCCEEEecCCCCEEC
Confidence            344 48763333 367997  99999999999999843

>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heregulin-alpha, EGF-like domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.88  E-value=2.9e-06  Score=51.69  Aligned_cols=48  Identities=21%  Similarity=0.418  Sum_probs=33.9

Q ss_pred             CCCCC-CCCCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCcccCCCCCC
Q psy5752           9 SLSEC-DTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPESLGCN   60 (222)
Q Consensus         9 ~~~~C-~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~~~~~C~   60 (222)
                      +.++| .+||.|+|+|......+..+.| .|.|++||+|.   .|+.....+.
T Consensus         5 ~c~ec~~~~C~NgG~C~~~~~~~~~~~y-~C~C~~gy~G~---~Ce~~~~~~~   53 (63)
T d1haea_           5 KCAEKEKTFCVNGGECFMVKDLSNPSRY-LCKCQPGFTGA---RCTENVPMKV   53 (63)
T ss_dssp             ECCHHHHTTSCTTCEEEEEESSSSSCCE-EEECCTTEEST---TSCEECCSSC
T ss_pred             cCCCCcCCcCCCCCEEeecccccCCCCE-EeECCCCCCCC---CcCCCCCccc
Confidence            56788 8999999999531100004566 99999999999   9986654333

>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.88  E-value=5.3e-06  Score=48.55  Aligned_cols=39  Identities=26%  Similarity=0.652  Sum_probs=30.5

Q ss_pred             CCC-CCCCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCcccCC
Q psy5752          11 SEC-DTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPES   56 (222)
Q Consensus        11 ~~C-~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~~~   56 (222)
                      ++| +++|.|+|+|+....   ...| +|.|++||+|.   .|+..+
T Consensus         7 ~~c~~~~C~NgG~C~~~~~---~~~~-~C~C~~gy~G~---~Ce~~~   46 (53)
T d3egfa_           7 PSSYDGYCLNGGVCMHIES---LDSY-TCNCVIGYSGD---RCQTRD   46 (53)
T ss_dssp             CTTSSCCSCSSCEEEEESS---SSCE-EEECCTTCCSS---SSCCCS
T ss_pred             CCCCCCCCCCCcEeeccCC---CCCe-EeECCCCCcCC---CCccCC
Confidence            456 789999999986322   3455 99999999999   898654

>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.87  E-value=5.5e-06  Score=45.78  Aligned_cols=36  Identities=25%  Similarity=0.886  Sum_probs=28.4

Q ss_pred             CCCCCCCCCCCCCCeeeeCCCCeeEeecC-CCCccCCCccc
Q psy5752         126 KSCLEDRSLCGKDASCVVASQGHFHCECN-EGFTGNGITCK  165 (222)
Q Consensus       126 d~C~~~~~~C~~~~~C~n~~~g~~~C~C~-~G~~gd~~~C~  165 (222)
                      |+|..+|  |.++++|++...++|+|.|+ +||+|  ..|+
T Consensus         2 d~C~~~P--C~ngG~C~~~~~~~y~C~C~~~gy~G--~~Ce   38 (41)
T d1cvua2           2 NPCCSNP--CQNRGECMSTGFDQYKCDCTRTGFYG--ENCT   38 (41)
T ss_dssp             CTTTTCC--CCTTCEEEEEETTEEEEECTTSSEET--TTTC
T ss_pred             CcCcCCC--CCCCCEEEECCCCCEEEeCcCCCcCC--cCcC
Confidence            6787665  99999999764356999996 69998  6665

>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement protease C1R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.86  E-value=4.8e-06  Score=48.84  Aligned_cols=40  Identities=25%  Similarity=0.539  Sum_probs=28.5

Q ss_pred             cCCCCC---CCCCCC------CCeecCCCCCCCCCCceeeecCCCCc--cCCCCCccc
Q psy5752           8 FSLSEC---DTPCHP------NAQCTSPDEFNESREQAKCICNFGYT--GDGVTECNP   54 (222)
Q Consensus         8 ~~~~~C---~~~C~~------~~~C~~~~~~~~~g~~~~C~C~~G~~--g~~~~~C~~   54 (222)
                      +|||||   ...|..      ...|+|  +   .|+| .|.|++||+  ++++ +|+.
T Consensus         2 vDidEC~~~~~~c~~~~~~~c~~~C~N--t---~GsY-~C~C~~Gy~l~~d~~-tC~~   52 (53)
T d1apqa_           2 VDLDECASRSKSGEEDPQPQCQHLCHN--Y---VGGY-FCSCRPGYELQEDRH-SCQA   52 (53)
T ss_dssp             CSCCTTTCSTTTCCCSSSCTTSSEEEE--E---TTEE-EEECSTTCEECTTSS-CEEC
T ss_pred             eecccccCCCCCcccCCCCCccCEeEc--C---CCCe-EeECCCCCeECCCCC-ceec
Confidence            699999   334432      237999  4   7888 999999998  3444 6653

>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (tissue-type), t-PA
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.86  E-value=1.4e-05  Score=44.13  Aligned_cols=35  Identities=26%  Similarity=0.756  Sum_probs=27.6

Q ss_pred             CCCCCCCCCCCEeeecCCCCCeEEecCCCCccCCCe
Q psy5752          59 CNVVKNCHANAECVYNATSAGYRCQCAQGYVGNGVE   94 (222)
Q Consensus        59 C~~~~~C~~~~~C~~~n~~g~~~C~C~~G~~~~~~~   94 (222)
                      |.+ .+|.++++|+.....++|+|.|++||.|..++
T Consensus         1 C~~-nPC~ngG~C~~~~~~~~y~C~C~~g~~G~~Ce   35 (41)
T d1tpga1           1 CSE-PRCFNGGTCQQALYFSDFVCQCPEGFAGKSCE   35 (41)
T ss_dssp             CSS-CCSCTTCEEEEESSSSCEEEECCTTCBSSSCC
T ss_pred             CcC-CCCCCCCEEecCCCCCCeEECCCCCCCCCCcC
Confidence            455 89999999973334568999999999988653

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.84  E-value=1.7e-06  Score=48.42  Aligned_cols=32  Identities=25%  Similarity=0.674  Sum_probs=26.2

Q ss_pred             CCCCC---CCCCCCCCeecCCCCCCCCCCceeeecCCCCccC
Q psy5752           9 SLSEC---DTPCHPNAQCTSPDEFNESREQAKCICNFGYTGD   47 (222)
Q Consensus         9 ~~~~C---~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~   47 (222)
                      |||||   +..|. ++.|+|  +   .|+| .|.|++||+..
T Consensus         2 DinEC~~~~~~c~-~~~C~N--t---~Gsy-~C~C~~Gy~l~   36 (43)
T d1uzka2           2 DIDECQELPGLCQ-GGKCIN--T---FGSF-QCRCPTGYYLN   36 (43)
T ss_dssp             ECCHHHHCGGGGB-TSEEEE--C---SSCE-EEECCTTCCBC
T ss_pred             CcccccCCCCCcC-CCEEEC--C---CCCe-EeECCCCCeEC
Confidence            79999   56676 469999  4   7888 99999999853

>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.83  E-value=4.8e-06  Score=47.56  Aligned_cols=36  Identities=28%  Similarity=0.822  Sum_probs=29.3

Q ss_pred             cCCCCCCCCCCCCCCCeeeeCCCCeeEeecCCCCccCCCccc
Q psy5752         124 PLKSCLEDRSLCGKDASCVVASQGHFHCECNEGFTGNGITCK  165 (222)
Q Consensus       124 ~id~C~~~~~~C~~~~~C~n~~~g~~~C~C~~G~~gd~~~C~  165 (222)
                      .+++|..+|  |.+ ++|++..++ |+|.|++||.|  ..|+
T Consensus         7 ~~~~C~~~P--C~n-G~C~~~~~~-y~C~C~~G~~G--~~Ce   42 (48)
T d1autl1           7 LEHPCASLC--CGH-GTCIDGIGS-FSCDCRSGWEG--RFCQ   42 (48)
T ss_dssp             SCCSSSSTT--TTS-EEECCCSSC-CCEEECTTEES--TTSC
T ss_pred             CCCcccCCC--CCC-CEEECCCCC-CeEeCCCCCcC--CCcc
Confidence            357888766  986 799998755 99999999998  6665

>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.72  E-value=3.1e-06  Score=48.53  Aligned_cols=39  Identities=23%  Similarity=0.542  Sum_probs=30.3

Q ss_pred             CCCC-CCCCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCcccC
Q psy5752          10 LSEC-DTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPE   55 (222)
Q Consensus        10 ~~~C-~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~~   55 (222)
                      -++| +++|.|+|+|+....   ...| +|.|++||+|.   .|+..
T Consensus         4 C~~c~~~~C~ngG~C~~~~~---~~~~-~C~C~~gy~G~---~Ce~~   43 (48)
T d1nqlb_           4 CPLSHDGYCLHDGVCMYIEA---LDKY-ACNCVVGYIGE---RCQYR   43 (48)
T ss_dssp             CCSTTCCEECTTCEEEEETT---TTEE-EEEECTTEEST---TSCEE
T ss_pred             CCCCCCCCCCCCcEEeeeCC---CCCe-EEeCCCCcccC---CCCcC
Confidence            3567 789999999986422   3445 99999999999   88754

>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.71  E-value=4.3e-06  Score=45.74  Aligned_cols=31  Identities=23%  Similarity=0.508  Sum_probs=26.4

Q ss_pred             CCCCC--CCCCCCCCeecCCCCCCCCCCceeeecCCCCccC
Q psy5752           9 SLSEC--DTPCHPNAQCTSPDEFNESREQAKCICNFGYTGD   47 (222)
Q Consensus         9 ~~~~C--~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~   47 (222)
                      |||||  +.+|.+  .|+|  +   .|+| .|.|++||+..
T Consensus         1 DidEC~~~~~C~~--~C~N--~---~Gsy-~C~C~~Gy~l~   33 (40)
T d1dx5i3           1 DIDECENGGFCSG--VCHN--L---PGTF-ECICGPDSALA   33 (40)
T ss_dssp             ECCHHHHCSSCSS--EEEE--C---SSSE-EEEECSSSSCE
T ss_pred             CccccCCCcCccC--EeeC--C---CCCe-EeECCCCCeeC
Confidence            68999  788864  9999  4   7888 99999999864

>d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.67  E-value=1.6e-05  Score=45.77  Aligned_cols=40  Identities=25%  Similarity=0.628  Sum_probs=31.1

Q ss_pred             CCCCCCCCCCCCeeeeCCCCeeEeecCCCCc--cCCCccccCCCC
Q psy5752         128 CLEDRSLCGKDASCVVASQGHFHCECNEGFT--GNGITCKPVRKK  170 (222)
Q Consensus       128 C~~~~~~C~~~~~C~n~~~g~~~C~C~~G~~--gd~~~C~~~~~~  170 (222)
                      |+.+.+.|.+  .|+++++ +|+|.|++||+  .|+++|.++.+.
T Consensus         2 C~~~NGgC~~--~C~~~~g-~~~C~C~~Gy~L~~D~~tC~~~~~~   43 (50)
T d1autl2           2 CSLDNGGCTH--YCLEEVG-WRRCSCAPGYKLGDDLLQCHPAVKF   43 (50)
T ss_dssp             SSSGGGGCSS--EEEECSS-SEEEECCTTEEECTTSSCEEECSSS
T ss_pred             CCCCCCCccc--EeecCCC-CeEEECCCCCEECCCCCccccCCCC
Confidence            4445567865  8999985 59999999999  478899877653

>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.66  E-value=1.4e-05  Score=45.09  Aligned_cols=28  Identities=32%  Similarity=0.795  Sum_probs=22.5

Q ss_pred             CCEeeecCCCCCeEEecCCCCc--cCCCeeec
Q psy5752          68 NAECVYNATSAGYRCQCAQGYV--GNGVECHP   97 (222)
Q Consensus        68 ~~~C~~~n~~g~~~C~C~~G~~--~~~~~C~~   97 (222)
                      .+.|+  |++|+|+|.|++||+  .++++|..
T Consensus        15 ~~~C~--Nt~gsy~C~C~~Gy~L~~d~~tC~~   44 (45)
T d1nt0a3          15 DHYCH--NYLGGYYCSCRVGYILHQNKHTCSA   44 (45)
T ss_dssp             SSEEE--EETTEEEEECCTTEEECTTSSCEEE
T ss_pred             CCEee--cCCCCEEEeCCCCCEECCCCCcccc
Confidence            56897  999999999999997  45555543

>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.65  E-value=1.9e-05  Score=44.52  Aligned_cols=28  Identities=32%  Similarity=0.828  Sum_probs=22.6

Q ss_pred             CCEeeecCCCCCeEEecCCCCc--cCCCeeec
Q psy5752          68 NAECVYNATSAGYRCQCAQGYV--GNGVECHP   97 (222)
Q Consensus        68 ~~~C~~~n~~g~~~C~C~~G~~--~~~~~C~~   97 (222)
                      .+.|+  |++|+|+|.|++||.  .++++|.+
T Consensus        15 ~~~C~--Nt~Gsy~C~C~~Gy~l~~d~~tC~D   44 (45)
T d1szba2          15 DHHCH--NHLGGFYCSCRAGYVLHRNKRTCSE   44 (45)
T ss_dssp             SSEEE--EETTEEEEECCTTEEECTTSSCEEE
T ss_pred             CCCCc--cCCCCeEEECCCCCeECCCCCCccC
Confidence            56897  999999999999998  45555543

>d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos taurus) [TaxId: 9913]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Cow (Bos taurus) [TaxId: 9913]

Probab=97.59  E-value=1.1e-05  Score=46.73  Aligned_cols=41  Identities=20%  Similarity=0.597  Sum_probs=32.3

Q ss_pred             CCCCCCCCCCCCeeeeCCCCeeEeecCCCCc--cCCCccccCCCCC
Q psy5752         128 CLEDRSLCGKDASCVVASQGHFHCECNEGFT--GNGITCKPVRKKE  171 (222)
Q Consensus       128 C~~~~~~C~~~~~C~n~~~g~~~C~C~~G~~--gd~~~C~~~~~~~  171 (222)
                      |+.+.+.|.+  .|++++ ++|+|.|++||.  .|+++|.++++++
T Consensus         1 C~~~NGgC~h--~C~~~~-~~~~C~C~~Gy~L~~D~~tC~~~~~~p   43 (51)
T d1kigl_           1 CSLDNGGCDQ--FCREER-SEVRCSCAHGYVLGDDSKSCVSTERFP   43 (51)
T ss_dssp             CCTTTTSSSS--CCCEET-TEECCCCCTTEEECTTSSCEEECSSSC
T ss_pred             CCCCCCCccc--EeEcCC-CcEEeEcCCCCEECCCCCccccCCccC
Confidence            3445667876  699997 559999999998  4788999887764

>d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.53  E-value=1.7e-05  Score=45.88  Aligned_cols=40  Identities=30%  Similarity=0.702  Sum_probs=31.3

Q ss_pred             CCCCCCCCCCCCeeeeCCCCeeEeecCCCCc--cCCCccccCCCC
Q psy5752         128 CLEDRSLCGKDASCVVASQGHFHCECNEGFT--GNGITCKPVRKK  170 (222)
Q Consensus       128 C~~~~~~C~~~~~C~n~~~g~~~C~C~~G~~--gd~~~C~~~~~~  170 (222)
                      |+.+.+.|.+  .|+|++ ++|+|.|++||.  .|+++|.++.+.
T Consensus         3 C~~~NGgC~h--~C~n~~-g~~~C~C~~Gy~L~~D~~tC~~~~~~   44 (51)
T d2p3ua1           3 CSLDNGDCDQ--FCHEEQ-NSVVCSCARGYTLADNGKACIPTGPY   44 (51)
T ss_dssp             GGTGGGGCSS--EEEEET-TEEEEECCTTEEECTTSSCEEESSSS
T ss_pred             cCCCCCCccc--EeecCC-CCeEeEcCCCCEECCCCCccccCCcc
Confidence            4445567865  899997 559999999999  478899987654

>d1rfnb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.45  E-value=4.5e-05  Score=45.06  Aligned_cols=41  Identities=24%  Similarity=0.640  Sum_probs=32.4

Q ss_pred             CCCCCCCCCCCCeeeeCCCCeeEeecCCCCc--cCCCccccCCCC
Q psy5752         128 CLEDRSLCGKDASCVVASQGHFHCECNEGFT--GNGITCKPVRKK  170 (222)
Q Consensus       128 C~~~~~~C~~~~~C~n~~~g~~~C~C~~G~~--gd~~~C~~~~~~  170 (222)
                      |+.+.+.|.+  .|+++++++|+|.|++||.  .|+++|..+.+.
T Consensus         3 C~~~NGgC~h--~C~~~~~~~~~C~C~~Gy~L~~D~~tC~~~~~f   45 (57)
T d1rfnb_           3 CNIKNGRCEQ--FCKNSADNKVVCSCTEGYRLAENQKSCEPAVPF   45 (57)
T ss_dssp             TTGGGGGCSS--EEEECTTSCEEEECCTTEEECTTSSSEEECSSS
T ss_pred             cCCCCCCccc--EeeeCCCCCeEeECCCCCEECCCCCccccCCCc
Confidence            5555667876  8999976669999999999  478899987654

>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement C1S component
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.37  E-value=8e-05  Score=41.06  Aligned_cols=34  Identities=26%  Similarity=0.647  Sum_probs=25.3

Q ss_pred             CCCC--CCCCCCCCEeeecCCCCCeEEecCCCCc--cCCCee
Q psy5752          58 GCNV--VKNCHANAECVYNATSAGYRCQCAQGYV--GNGVEC   95 (222)
Q Consensus        58 ~C~~--~~~C~~~~~C~~~n~~g~~~C~C~~G~~--~~~~~C   95 (222)
                      ||+.  ...|.  ..|+  |++|+|+|.|++||.  .++.+|
T Consensus         2 EC~~~~~~~C~--~~C~--n~~Gsy~C~C~~Gy~L~~d~~tC   39 (42)
T d1nzia2           2 ECTDFVDVPCS--HFCN--NFIGGYFCSCPPEYFLHDDMKNC   39 (42)
T ss_dssp             TTTC-CCCCSS--SEEE--EETTEEEEECCTTCEECTTSSCE
T ss_pred             CCCCCCCcCCC--CEee--cCCCCEEEeCCCCCEECCCCCee
Confidence            4653  25674  5897  999999999999998  444544

>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.29  E-value=0.00014  Score=37.63  Aligned_cols=31  Identities=35%  Similarity=0.924  Sum_probs=24.8

Q ss_pred             CCCCCCCCCCCCCCeeeeCCCCeeEeecCCCCcc
Q psy5752         126 KSCLEDRSLCGKDASCVVASQGHFHCECNEGFTG  159 (222)
Q Consensus       126 d~C~~~~~~C~~~~~C~n~~~g~~~C~C~~G~~g  159 (222)
                      |||+.+ ++|.+ ++|.|..+| |.|.|.+||..
T Consensus         2 dECsig-npCGn-GTCtNviGg-Fec~C~~GFep   32 (39)
T d1emoa2           2 DECSVG-NPCGN-GTCKNVIGG-FECTCEEGFEP   32 (39)
T ss_dssp             CGGGTT-CSSSS-SCEEECSSS-EEECCSSSSCC
T ss_pred             CccccC-CccCC-ceeeecccc-eEEeecCCcCC
Confidence            567654 56874 799999866 99999999983

>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heregulin-alpha, EGF-like domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.23  E-value=4.6e-05  Score=46.11  Aligned_cols=38  Identities=24%  Similarity=0.632  Sum_probs=28.8

Q ss_pred             cCCCCCCCCCCCCCCCeee-----eCCCCeeEeecCCCCccCCCcccc
Q psy5752         124 PLKSCLEDRSLCGKDASCV-----VASQGHFHCECNEGFTGNGITCKP  166 (222)
Q Consensus       124 ~id~C~~~~~~C~~~~~C~-----n~~~g~~~C~C~~G~~gd~~~C~~  166 (222)
                      +.++|..++  |.++|+|.     +.. +.|.|.|++||+|  ..|+.
T Consensus         5 ~c~ec~~~~--C~NgG~C~~~~~~~~~-~~y~C~C~~gy~G--~~Ce~   47 (63)
T d1haea_           5 KCAEKEKTF--CVNGGECFMVKDLSNP-SRYLCKCQPGFTG--ARCTE   47 (63)
T ss_dssp             ECCHHHHTT--SCTTCEEEEEESSSSS-CCEEEECCTTEES--TTSCE
T ss_pred             cCCCCcCCc--CCCCCEEeecccccCC-CCEEeECCCCCCC--CCcCC
Confidence            356676655  99999996     333 4599999999999  77764

>d2bz6l1 g.3.11.1 (L:90-142) Coagulation factor VIIa {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Coagulation factor VIIa
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.21  E-value=0.00011  Score=42.58  Aligned_cols=40  Identities=25%  Similarity=0.838  Sum_probs=30.8

Q ss_pred             CCCCCCCCCCCCeeeeCCCCeeEeecCCCCc--cCCCccccCCC
Q psy5752         128 CLEDRSLCGKDASCVVASQGHFHCECNEGFT--GNGITCKPVRK  169 (222)
Q Consensus       128 C~~~~~~C~~~~~C~n~~~g~~~C~C~~G~~--gd~~~C~~~~~  169 (222)
                      |+.+.+.|.+  .|+++++++|+|.|+.||.  .|+++|.....
T Consensus         2 C~~~NGGC~h--~C~~~~~~~~~C~C~~Gy~L~~D~~tC~~~~~   43 (53)
T d2bz6l1           2 CVNENGGCEQ--YCSDHTGTKRSCRCHEGYSLLADGVSCTPTVE   43 (53)
T ss_dssp             TTSGGGGCSS--EEEEETTTEEEEECCTTEEECTTSSCEEECSS
T ss_pred             CCCCCCCCcC--EeeeCCCCCEEeECCCCCEECCCCCcccCCCc
Confidence            4455566876  7999987779999999999  47788886543

>d1ijqa2 g.3.11.1 (A:643-692) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.06  E-value=0.00022  Score=40.84  Aligned_cols=38  Identities=21%  Similarity=0.476  Sum_probs=27.8

Q ss_pred             CCCCCCCCCCCCCCeeeeCC-----CCeeEeecCCCCcc--CCCccc
Q psy5752         126 KSCLEDRSLCGKDASCVVAS-----QGHFHCECNEGFTG--NGITCK  165 (222)
Q Consensus       126 d~C~~~~~~C~~~~~C~n~~-----~g~~~C~C~~G~~g--d~~~C~  165 (222)
                      ++|+...+.|.+  .|+.++     .++|+|.|++||+.  |+++|.
T Consensus         5 neC~~~NGGC~h--~Cl~~p~~~n~~~~y~C~C~~G~~L~~D~~tCi   49 (50)
T d1ijqa2           5 ERTTLSNGGCQY--LCLPAPQINPHSPKFTCACPDGMLLARDMRSCL   49 (50)
T ss_dssp             SSSSSGGGGCSS--EEEECCCCSTTCCSEEEECCTTCEECTTSSCEE
T ss_pred             cccCCCCCCCcC--ccCCCcCcccCCCCEEEeCCCCCEECCCCCccc
Confidence            567766777976  797443     24599999999993  667774

>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.05  E-value=0.0002  Score=38.93  Aligned_cols=34  Identities=26%  Similarity=0.690  Sum_probs=24.9

Q ss_pred             CCCC-CCCCCCCCEeeecCCCCCeEEecCCCCc-cCCCee
Q psy5752          58 GCNV-VKNCHANAECVYNATSAGYRCQCAQGYV-GNGVEC   95 (222)
Q Consensus        58 ~C~~-~~~C~~~~~C~~~n~~g~~~C~C~~G~~-~~~~~C   95 (222)
                      ||.. ...|.  ..|+  |++++|+|.|++||. .++.+|
T Consensus         4 eC~~~nggC~--h~C~--n~~g~~~C~C~~Gy~L~d~~tC   39 (40)
T d3bpse1           4 ECLDNNGGCS--HVCN--DLKIGYECLCPDGFQLVAQRRC   39 (40)
T ss_dssp             GGGTGGGGCS--SEEE--ECSSSEEEECCTTCCEETTTEE
T ss_pred             cCCCCCCCCc--CEEE--cCCCCEEEECCCCCEECCCCcC
Confidence            3654 46674  4896  999999999999998 344443

>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.99  E-value=0.00058  Score=39.51  Aligned_cols=34  Identities=24%  Similarity=0.588  Sum_probs=27.3

Q ss_pred             CCCCCCCCCCCEeeecCCCCCeEEecCCCCccCCC
Q psy5752          59 CNVVKNCHANAECVYNATSAGYRCQCAQGYVGNGV   93 (222)
Q Consensus        59 C~~~~~C~~~~~C~~~n~~g~~~C~C~~G~~~~~~   93 (222)
                      |.+ .+|.++++|+......+|+|.|++||+|..+
T Consensus         9 c~~-~~C~NgG~C~~~~~~~~~~C~C~~gy~G~~C   42 (53)
T d3egfa_           9 SYD-GYCLNGGVCMHIESLDSYTCNCVIGYSGDRC   42 (53)
T ss_dssp             TSS-CCSCSSCEEEEESSSSCEEEECCTTCCSSSS
T ss_pred             CCC-CCCCCCcEeeccCCCCCeEeECCCCCcCCCC
Confidence            444 8999999996335556899999999998855

>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.84  E-value=0.00051  Score=38.89  Aligned_cols=35  Identities=26%  Similarity=0.723  Sum_probs=27.5

Q ss_pred             CCCCCCCCCCCEeeecCCCCCeEEecCCCCccCCCe
Q psy5752          59 CNVVKNCHANAECVYNATSAGYRCQCAQGYVGNGVE   94 (222)
Q Consensus        59 C~~~~~C~~~~~C~~~n~~g~~~C~C~~G~~~~~~~   94 (222)
                      |.. ++|.++++|+......+|+|.|.+||+|..++
T Consensus         7 c~~-~~C~ngG~C~~~~~~~~~~C~C~~gy~G~~Ce   41 (48)
T d1nqlb_           7 SHD-GYCLHDGVCMYIEALDKYACNCVVGYIGERCQ   41 (48)
T ss_dssp             TTC-CEECTTCEEEEETTTTEEEEEECTTEESTTSC
T ss_pred             CCC-CCCCCCcEEeeeCCCCCeEEeCCCCcccCCCC
Confidence            444 88999999963345578999999999988653

>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epiregulin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.66  E-value=0.00037  Score=39.02  Aligned_cols=34  Identities=29%  Similarity=0.637  Sum_probs=25.2

Q ss_pred             CCCCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCcccC
Q psy5752          14 DTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPE   55 (222)
Q Consensus        14 ~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~~   55 (222)
                      .++|.| |.|.....   ...+ .|.|++||+|+   .|+..
T Consensus        11 ~~yC~n-G~C~~~~~---~~~~-~C~C~~gY~G~---RCe~~   44 (46)
T d1k36a_          11 NGYCLH-GQCIYLVD---MSQN-YCRCEVGYTGV---RCEHF   44 (46)
T ss_dssp             CSSCSS-EEEEEETT---TTEE-EEEECTTCSST---TSCCC
T ss_pred             CCcCcC-CEEEEeCC---CCcc-EeECCCCceec---Cceee
Confidence            478997 67764222   4556 99999999999   88754

>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.62  E-value=0.00072  Score=34.93  Aligned_cols=29  Identities=28%  Similarity=0.788  Sum_probs=24.4

Q ss_pred             CCC--CCCCCCCCeecCCCCCCCCCCceeeecCCCCcc
Q psy5752          11 SEC--DTPCHPNAQCTSPDEFNESREQAKCICNFGYTG   46 (222)
Q Consensus        11 ~~C--~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g   46 (222)
                      |||  .+||.| ++|.|.     .|.+ .|.|..||.-
T Consensus         2 dECsignpCGn-GTCtNv-----iGgF-ec~C~~GFep   32 (39)
T d1emoa2           2 DECSVGNPCGN-GTCKNV-----IGGF-ECTCEEGFEP   32 (39)
T ss_dssp             CGGGTTCSSSS-SCEEEC-----SSSE-EECCSSSSCC
T ss_pred             CccccCCccCC-ceeeec-----ccce-EEeecCCcCC
Confidence            788  789985 799994     6776 9999999973

>d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Betacellulin-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.34  E-value=0.00057  Score=38.96  Aligned_cols=35  Identities=20%  Similarity=0.498  Sum_probs=27.1

Q ss_pred             CCCCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCcccCC
Q psy5752          14 DTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPES   56 (222)
Q Consensus        14 ~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~~~   56 (222)
                      .+.|.|++.|....    ...+ .|.|+.||+|.   .|+..+
T Consensus        13 ~~yC~nGgcc~~~~----~~~~-~C~C~~gy~G~---rCe~~~   47 (50)
T d1ioxa_          13 KHYCIKGRCRFVVA----EQTP-SCVCDEGYIGA---RCERVD   47 (50)
T ss_dssp             TTSCTTCCEEEETT----TTEE-EECCCTTEETT---TTCEEC
T ss_pred             CCCccCCeEEEeCC----CCCc-EeECCCCCeeC---CCccce
Confidence            47899999886432    4555 99999999999   887554

>d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.18  E-value=0.002  Score=36.62  Aligned_cols=33  Identities=33%  Similarity=0.811  Sum_probs=24.8

Q ss_pred             CCCCCCCEeeecCCCCCeEEecCCCCc--cCCCeeecCC
Q psy5752          63 KNCHANAECVYNATSAGYRCQCAQGYV--GNGVECHPLK   99 (222)
Q Consensus        63 ~~C~~~~~C~~~n~~g~~~C~C~~G~~--~~~~~C~~~~   99 (222)
                      ..|.  ..|+  +++++|+|.|+.||+  .++++|+.++
T Consensus         7 GgC~--~~C~--~~~g~~~C~C~~Gy~L~~D~~tC~~~~   41 (50)
T d1autl2           7 GGCT--HYCL--EEVGWRRCSCAPGYKLGDDLLQCHPAV   41 (50)
T ss_dssp             GGCS--SEEE--ECSSSEEEECCTTEEECTTSSCEEECS
T ss_pred             CCcc--cEee--cCCCCeEEECCCCCEECCCCCccccCC
Confidence            4563  4896  889999999999998  4556665544

>d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos taurus) [TaxId: 9913]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Cow (Bos taurus) [TaxId: 9913]

Probab=95.98  E-value=0.0011  Score=37.98  Aligned_cols=35  Identities=29%  Similarity=0.712  Sum_probs=25.0

Q ss_pred             CCCCCCCEeeecCCCCCeEEecCCCCc--cCCCeeecCCCc
Q psy5752          63 KNCHANAECVYNATSAGYRCQCAQGYV--GNGVECHPLKSC  101 (222)
Q Consensus        63 ~~C~~~~~C~~~n~~g~~~C~C~~G~~--~~~~~C~~~~~C  101 (222)
                      ..|.  ..|+  +++++|+|.|..||.  .++.+|++++++
T Consensus         6 GgC~--h~C~--~~~~~~~C~C~~Gy~L~~D~~tC~~~~~~   42 (51)
T d1kigl_           6 GGCD--QFCR--EERSEVRCSCAHGYVLGDDSKSCVSTERF   42 (51)
T ss_dssp             TSSS--SCCC--EETTEECCCCCTTEEECTTSSCEEECSSS
T ss_pred             CCcc--cEeE--cCCCcEEeEcCCCCEECCCCCccccCCcc
Confidence            4553  3686  889999999999998  455656555544

>d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.97  E-value=0.0022  Score=36.59  Aligned_cols=34  Identities=32%  Similarity=0.791  Sum_probs=25.1

Q ss_pred             CCCCCCCEeeecCCCCCeEEecCCCCc--cCCCeeecCCC
Q psy5752          63 KNCHANAECVYNATSAGYRCQCAQGYV--GNGVECHPLKS  100 (222)
Q Consensus        63 ~~C~~~~~C~~~n~~g~~~C~C~~G~~--~~~~~C~~~~~  100 (222)
                      ..|.  ..|+  +++++|+|.|..||.  .++.+|+++++
T Consensus         8 GgC~--h~C~--n~~g~~~C~C~~Gy~L~~D~~tC~~~~~   43 (51)
T d2p3ua1           8 GDCD--QFCH--EEQNSVVCSCARGYTLADNGKACIPTGP   43 (51)
T ss_dssp             GGCS--SEEE--EETTEEEEECCTTEEECTTSSCEEESSS
T ss_pred             CCcc--cEee--cCCCCeEeEcCCCCEECCCCCccccCCc
Confidence            4563  4896  899999999999998  45566665443

>d1moxc_ g.3.11.1 (C:) Transforming growth factor alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Transforming growth factor alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.93  E-value=0.00087  Score=37.97  Aligned_cols=35  Identities=20%  Similarity=0.538  Sum_probs=26.5

Q ss_pred             CCCCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCcccCC
Q psy5752          14 DTPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPES   56 (222)
Q Consensus        14 ~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~~~   56 (222)
                      .+.|.|++.|... .   ...+ +|.|++||+|.   .|+..+
T Consensus        12 ~~yClnGgcc~~~-~---~~~~-~C~C~~gy~G~---RCe~~~   46 (49)
T d1moxc_          12 TQFCFHGTCRFLV-Q---EDKP-ACVCHSGYVGA---RCEHAD   46 (49)
T ss_dssp             SCSSTTEEEEEET-T---TTEE-EEEECTTEEST---TSCEEC
T ss_pred             CCEeeCCeEEecC-C---CCCc-EeECCCCCEec---CCcccc
Confidence            4679998877542 2   4555 99999999999   887544

>d1moxc_ g.3.11.1 (C:) Transforming growth factor alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Transforming growth factor alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.35  E-value=0.0071  Score=34.04  Aligned_cols=34  Identities=18%  Similarity=0.578  Sum_probs=26.0

Q ss_pred             CCCCCCCeeeeCCCCeeEeecCCCCccCCCccccCC
Q psy5752         133 SLCGKDASCVVASQGHFHCECNEGFTGNGITCKPVR  168 (222)
Q Consensus       133 ~~C~~~~~C~n~~~g~~~C~C~~G~~gd~~~C~~~~  168 (222)
                      +.|.+++.|.......++|.|++||+|  .+|+..+
T Consensus        13 ~yClnGgcc~~~~~~~~~C~C~~gy~G--~RCe~~~   46 (49)
T d1moxc_          13 QFCFHGTCRFLVQEDKPACVCHSGYVG--ARCEHAD   46 (49)
T ss_dssp             CSSTTEEEEEETTTTEEEEEECTTEES--TTSCEEC
T ss_pred             CEeeCCeEEecCCCCCcEeECCCCCEe--cCCcccc
Confidence            458887778655556799999999999  6777543

>d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Betacellulin-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.28  E-value=0.0085  Score=33.86  Aligned_cols=34  Identities=29%  Similarity=0.657  Sum_probs=26.3

Q ss_pred             CCCCCCCeeeeCCCCeeEeecCCCCccCCCccccCC
Q psy5752         133 SLCGKDASCVVASQGHFHCECNEGFTGNGITCKPVR  168 (222)
Q Consensus       133 ~~C~~~~~C~n~~~g~~~C~C~~G~~gd~~~C~~~~  168 (222)
                      +.|.+++.|.....+.+.|.|+.||+|  ..|+..+
T Consensus        14 ~yC~nGgcc~~~~~~~~~C~C~~gy~G--~rCe~~~   47 (50)
T d1ioxa_          14 HYCIKGRCRFVVAEQTPSCVCDEGYIG--ARCERVD   47 (50)
T ss_dssp             TSCTTCCEEEETTTTEEEECCCTTEET--TTTCEEC
T ss_pred             CCccCCeEEEeCCCCCcEeECCCCCee--CCCccce
Confidence            458888888755556699999999999  6777543

>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epiregulin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.28  E-value=0.011  Score=32.80  Aligned_cols=30  Identities=27%  Similarity=0.715  Sum_probs=24.0

Q ss_pred             CCCCCCCEeeecCCCCCeEEecCCCCccCCC
Q psy5752          63 KNCHANAECVYNATSAGYRCQCAQGYVGNGV   93 (222)
Q Consensus        63 ~~C~~~~~C~~~n~~g~~~C~C~~G~~~~~~   93 (222)
                      +.|.+ +.|........+.|.|++||.|+.+
T Consensus        12 ~yC~n-G~C~~~~~~~~~~C~C~~gY~G~RC   41 (46)
T d1k36a_          12 GYCLH-GQCIYLVDMSQNYCRCEVGYTGVRC   41 (46)
T ss_dssp             SSCSS-EEEEEETTTTEEEEEECTTCSSTTS
T ss_pred             CcCcC-CEEEEeCCCCccEeECCCCceecCc
Confidence            78987 6775346677899999999999854

>d1xdtr_ g.3.11.1 (R:) Heparin-binding epidermal growth factor, HBEGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heparin-binding epidermal growth factor, HBEGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.97  E-value=0.012  Score=31.65  Aligned_cols=32  Identities=34%  Similarity=0.837  Sum_probs=24.1

Q ss_pred             CCCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCccc
Q psy5752          15 TPCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNP   54 (222)
Q Consensus        15 ~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~   54 (222)
                      +-|.| |.|.....   .... +|.|..||+|.   .|+.
T Consensus         8 ~yCih-G~C~~i~~---l~~~-~C~C~~gY~G~---RCq~   39 (41)
T d1xdtr_           8 DFCIH-GECKYVKE---LRAP-SCICHPGYHGE---RCHG   39 (41)
T ss_dssp             TCCSS-EEECCBGG---GTBC-CEEECTTEEST---TCCE
T ss_pred             CEeEC-cEEeecCc---CCCc-eeECCCCCeec---Cccc
Confidence            46776 89986433   4555 89999999999   7763

>d1dx5i1 g.3.11.1 (I:345-387) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.89  E-value=0.029  Score=29.62  Aligned_cols=32  Identities=31%  Similarity=0.855  Sum_probs=24.4

Q ss_pred             cCCCCCCCCCCCCCCCeeeeCCCCeeEeecCCCCcc
Q psy5752         124 PLKSCLEDRSLCGKDASCVVASQGHFHCECNEGFTG  159 (222)
Q Consensus       124 ~id~C~~~~~~C~~~~~C~n~~~g~~~C~C~~G~~g  159 (222)
                      .+|+|...+  |..  .|.....+.|+|.|.+||..
T Consensus         3 ~vDPCf~~~--CE~--qCqP~~~~~Y~CiCaeGFaP   34 (43)
T d1dx5i1           3 PVDPCFRAN--CEY--QCQPLDQTSYLCVCAEGFAP   34 (43)
T ss_dssp             CCCGGGGCC--CSS--EEEECSSSCEEEECCTTEEE
T ss_pred             ccccccCCC--cce--eeeeCCCCcceEEecccccc
Confidence            357787544  864  79877666699999999984

>d2i9aa1 g.3.11.1 (A:10-49) Plasminogen activator (urokinase-type) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (urokinase-type)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.06  E-value=0.035  Score=28.63  Aligned_cols=35  Identities=26%  Similarity=0.604  Sum_probs=24.8

Q ss_pred             CCCCCCeecCCCCCCCCCCceeeecCCCCccCCCCCcccCC
Q psy5752          16 PCHPNAQCTSPDEFNESREQAKCICNFGYTGDGVTECNPES   56 (222)
Q Consensus        16 ~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~~~~   56 (222)
                      .|.|+|+|+.-..+  .+-. .|.|+.+|.|.   .|+.+.
T Consensus         3 ~ClNGG~Cvsyk~F--S~I~-rC~CPk~f~G~---HCEiDt   37 (40)
T d2i9aa1           3 DCLNGGTCVSNKYF--SNIH-WCNCPKKFGGQ---HCEIDK   37 (40)
T ss_dssp             CCCTTCEEEECSSS--TTCE-EEECCTTEEST---TSCEES
T ss_pred             ccccCCEEEEEehh--cCCE-EecCCcccCce---eEEecc
Confidence            48899999863221  1222 79999999999   888543

>d1rfnb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.29  E-value=0.1  Score=30.04  Aligned_cols=33  Identities=27%  Similarity=0.667  Sum_probs=22.7

Q ss_pred             CCCCCCCEeeecCCC-CCeEEecCCCCcc--CCCeeecCC
Q psy5752          63 KNCHANAECVYNATS-AGYRCQCAQGYVG--NGVECHPLK   99 (222)
Q Consensus        63 ~~C~~~~~C~~~n~~-g~~~C~C~~G~~~--~~~~C~~~~   99 (222)
                      ..|.  ..|+  +++ ++|+|.|..||..  ++.+|++++
T Consensus         8 GgC~--h~C~--~~~~~~~~C~C~~Gy~L~~D~~tC~~~~   43 (57)
T d1rfnb_           8 GRCE--QFCK--NSADNKVVCSCTEGYRLAENQKSCEPAV   43 (57)
T ss_dssp             GGCS--SEEE--ECTTSCEEEECCTTEEECTTSSSEEECS
T ss_pred             CCcc--cEee--eCCCCCeEeECCCCCEECCCCCccccCC
Confidence            4563  4896  554 5899999999983  455565544

>d1ijqa2 g.3.11.1 (A:643-692) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.10  E-value=0.087  Score=29.45  Aligned_cols=35  Identities=23%  Similarity=0.601  Sum_probs=22.1

Q ss_pred             CCC-CCCCCCCCEeee----cCCCCCeEEecCCCCcc--CCCee
Q psy5752          59 CNV-VKNCHANAECVY----NATSAGYRCQCAQGYVG--NGVEC   95 (222)
Q Consensus        59 C~~-~~~C~~~~~C~~----~n~~g~~~C~C~~G~~~--~~~~C   95 (222)
                      |.. ...|.  ..|+.    .++.++|+|.|+.||..  ++++|
T Consensus         7 C~~~NGGC~--h~Cl~~p~~~n~~~~y~C~C~~G~~L~~D~~tC   48 (50)
T d1ijqa2           7 TTLSNGGCQ--YLCLPAPQINPHSPKFTCACPDGMLLARDMRSC   48 (50)
T ss_dssp             SSSGGGGCS--SEEEECCCCSTTCCSEEEECCTTCEECTTSSCE
T ss_pred             cCCCCCCCc--CccCCCcCcccCCCCEEEeCCCCCEECCCCCcc
Confidence            443 34563  37851    14568999999999983  34444

>d1xdtr_ g.3.11.1 (R:) Heparin-binding epidermal growth factor, HBEGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heparin-binding epidermal growth factor, HBEGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.89  E-value=0.063  Score=28.70  Aligned_cols=30  Identities=30%  Similarity=0.649  Sum_probs=23.2

Q ss_pred             CCCCCCCEeeecCCCCCeEEecCCCCccCCC
Q psy5752          63 KNCHANAECVYNATSAGYRCQCAQGYVGNGV   93 (222)
Q Consensus        63 ~~C~~~~~C~~~n~~g~~~C~C~~G~~~~~~   93 (222)
                      +.|.+ ++|........+.|.|..||+|..+
T Consensus         8 ~yCih-G~C~~i~~l~~~~C~C~~gY~G~RC   37 (41)
T d1xdtr_           8 DFCIH-GECKYVKELRAPSCICHPGYHGERC   37 (41)
T ss_dssp             TCCSS-EEECCBGGGTBCCEEECTTEESTTC
T ss_pred             CEeEC-cEEeecCcCCCceeECCCCCeecCc
Confidence            56775 8996434566789999999999865

>d1dx5i1 g.3.11.1 (I:345-387) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.53  E-value=0.064  Score=28.28  Aligned_cols=29  Identities=28%  Similarity=0.794  Sum_probs=22.9

Q ss_pred             CCCC-CCCCCCCCeecCCCCCCCCCCceeeecCCCCc
Q psy5752          10 LSEC-DTPCHPNAQCTSPDEFNESREQAKCICNFGYT   45 (222)
Q Consensus        10 ~~~C-~~~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~   45 (222)
                      +|+| ..+|..  .|....    .+.| .|+|..||.
T Consensus         4 vDPCf~~~CE~--qCqP~~----~~~Y-~CiCaeGFa   33 (43)
T d1dx5i1           4 VDPCFRANCEY--QCQPLD----QTSY-LCVCAEGFA   33 (43)
T ss_dssp             CCGGGGCCCSS--EEEECS----SSCE-EEECCTTEE
T ss_pred             cccccCCCcce--eeeeCC----CCcc-eEEeccccc
Confidence            6788 778876  888752    4566 999999997

>d2i9aa1 g.3.11.1 (A:10-49) Plasminogen activator (urokinase-type) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (urokinase-type)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.30  E-value=0.2  Score=25.67  Aligned_cols=29  Identities=28%  Similarity=0.773  Sum_probs=22.1

Q ss_pred             CCCCCeeeeCC--CCeeEeecCCCCccCCCccc
Q psy5752         135 CGKDASCVVAS--QGHFHCECNEGFTGNGITCK  165 (222)
Q Consensus       135 C~~~~~C~n~~--~g~~~C~C~~G~~gd~~~C~  165 (222)
                      |.++++|+...  .+-.+|.||.+|.|  ..|+
T Consensus         4 ClNGG~Cvsyk~FS~I~rC~CPk~f~G--~HCE   34 (40)
T d2i9aa1           4 CLNGGTCVSNKYFSNIHWCNCPKKFGG--QHCE   34 (40)
T ss_dssp             CCTTCEEEECSSSTTCEEEECCTTEES--TTSC
T ss_pred             cccCCEEEEEehhcCCEEecCCcccCc--eeEE
Confidence            77889999653  23368999999998  5565

>d1kloa1 g.3.11.2 (A:11-65) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Laminin-type module
domain: Laminin gamma1 chain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=89.31  E-value=0.07  Score=30.50  Aligned_cols=32  Identities=28%  Similarity=0.753  Sum_probs=23.0

Q ss_pred             CCCCCCeecCCCCCCCCCCceee-ecCCCCccCCCCCccc
Q psy5752          16 PCHPNAQCTSPDEFNESREQAKC-ICNFGYTGDGVTECNP   54 (222)
Q Consensus        16 ~C~~~~~C~~~~~~~~~g~~~~C-~C~~G~~g~~~~~C~~   54 (222)
                      +|.++++|.....   .+.. .| .|..||+|.   .|+.
T Consensus         2 pC~~~~~c~~~~~---~~~~-vC~~C~~~~~G~---~Ce~   34 (55)
T d1kloa1           2 PCPGGSSCAIVPK---TKEV-VCTHCPTGTAGK---RCEL   34 (55)
T ss_dssp             CSCTTCCEEECSS---SCCE-EECSCCTTEEST---TSCE
T ss_pred             cCcCCCccceeCC---CCCE-EcCCCCCCCccC---cccc
Confidence            5667777765332   4555 78 599999999   8875

>d1l3ya_ g.3.11.6 (A:) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Integrin beta EGF-like domains
domain: Integrin beta EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.66  E-value=0.14  Score=27.26  Aligned_cols=22  Identities=32%  Similarity=0.883  Sum_probs=17.9

Q ss_pred             CCCeecCCCCCCCCCCceeeecCCCCccCCCCCcc
Q psy5752          19 PNAQCTSPDEFNESREQAKCICNFGYTGDGVTECN   53 (222)
Q Consensus        19 ~~~~C~~~~~~~~~g~~~~C~C~~G~~g~~~~~C~   53 (222)
                      .++.|+.  .        .|.|.+||+|+   .|+
T Consensus        19 ~hG~C~~--G--------~C~C~~Gw~G~---~Ce   40 (41)
T d1l3ya_          19 GRGLCFC--G--------KCRCHPGFEGS---ACQ   40 (41)
T ss_dssp             HHEEEET--T--------EEEECTTCCTT---TTC
T ss_pred             CCCeEEC--C--------EEEcCCCCccc---Ccc
Confidence            3688977  2        79999999999   665

>d2bz6l1 g.3.11.1 (L:90-142) Coagulation factor VIIa {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Coagulation factor VIIa
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.07  E-value=0.33  Score=27.28  Aligned_cols=32  Identities=31%  Similarity=0.898  Sum_probs=21.6

Q ss_pred             CCCCCCCEeeecCCCC-CeEEecCCCCc--cCCCeeecC
Q psy5752          63 KNCHANAECVYNATSA-GYRCQCAQGYV--GNGVECHPL   98 (222)
Q Consensus        63 ~~C~~~~~C~~~n~~g-~~~C~C~~G~~--~~~~~C~~~   98 (222)
                      ..|.  ..|+  ++++ +|.|.|..||.  .++.+|...
T Consensus         7 GGC~--h~C~--~~~~~~~~C~C~~Gy~L~~D~~tC~~~   41 (53)
T d2bz6l1           7 GGCE--QYCS--DHTGTKRSCRCHEGYSLLADGVSCTPT   41 (53)
T ss_dssp             GGCS--SEEE--EETTTEEEEECCTTEEECTTSSCEEEC
T ss_pred             CCCc--CEee--eCCCCCEEeECCCCCEECCCCCcccCC
Confidence            3453  4786  5554 68999999998  355666543

>d1jv2b4 g.3.11.6 (B:532-562) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Integrin beta EGF-like domains
domain: Integrin beta EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.26  E-value=0.24  Score=24.15  Aligned_cols=22  Identities=32%  Similarity=0.911  Sum_probs=17.2

Q ss_pred             CCCCCCeecCCCCCCCCCCceeeecCCCCccC
Q psy5752          16 PCHPNAQCTSPDEFNESREQAKCICNFGYTGD   47 (222)
Q Consensus        16 ~C~~~~~C~~~~~~~~~g~~~~C~C~~G~~g~   47 (222)
                      .|..|+.|.=  .        .|.|.+||+|+
T Consensus         4 ~C~ghG~C~C--G--------~C~C~~gw~G~   25 (31)
T d1jv2b4           4 MCSGHGQCSC--G--------DCLCDSDWTGY   25 (31)
T ss_dssp             CSCCCTTCCS--T--------TTCCCTTEESS
T ss_pred             eccCCCcccC--C--------ceEccCCcccc
Confidence            4677777754  1        69999999998