Psyllid ID: psy5888

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------
Protein Sequence
MVMPNTGHSSPKQASVYPLSIRVSESQEQPSEEMPFDLSQNTTRSHNGPHMSPAGKPPSSPDSERHEEQPLDLRVDHKKVFLSRNMEDENRNLILRSPTPSENLEVNYRSSPASTKDELQVQDDDRSSPPNIKSRSLSTYPVLFPHPVMLEAMYRARDKVPRLPLPYSMNSPPGYPGRPAYPFINSGLLNGHPIQSPTIDLIRSQLPPLANSPKQFQESISNNTGKPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDRNGGIPSPSMIHNRCRPPSGILNDDSYFEEIRSFMGKVSADGNRLVQRVSSLSRANYNYYLPHQEDAENNNNINSKKEILSPSEKDNYSSRSSTSSLGSTHAVPHPPRTKDVPESTREKTPDPVTNT
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcccccccccccccccccccccccHHccccccccccccccccccccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccHcccccccccccccccccccccccccccccccccccccHcEcccccccccccccccEEccccHHHEHcHccccccccccccccccEcccccHHHHHHHHcccccccccccccccEcccccHHHcccEcccccccccEEccccccccccccccccccccccccccccEEEEEEcccccccccccccccEccccHHHEHEEEccccccccEEccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHEEcccccccccccccccEccccHHHHHHHHcccccccccccccccEccccHHHHHHHHcccccccccccccccccccccEccccHHHHHHHHHcccccccccccccccEccccHHHHHHHHcccccccccccccccHHEHEcccccccccccccccEEccccEEEEcc
Coil and Loop (DISEMBL)
mvmpntghsspkqasvyplsirvsesqeqpseempfdlsqnttrshngphmspagkppsspdserheeqpldlrvdhKKVFLSRNmedenrnlilrsptpsenlevnyrsspastkdelqvqdddrssppniksrslstypvlfphpVMLEAMYRArdkvprlplpysmnsppgypgrpaypfinsgllnghpiqsptidlirsqlpplanspkqfqesisnntgkpkdryackfcgkvfprsanltrhlrthtgeqpykckycersfsissNLQRHVRnihnkekpfkcplcdrcfgqqtnldrhlkkheadgptilddrnggipspsmihnrcrppsgilnddSYFEEIRSFMGKVSADGNRLVQRVSSLSranynyylphqedaennnninskkeilspsekdnyssrsstsslgsthavphpprtkdvpestrektpdpvtnt
Flexible Loop (DISEMBL)
mvmpntghsspkqasvyPLSIRVSESQEQPSEEMPFDLSQNTTRSHNGPHMSPAGKPPSSPDSERHEeqpldlrvdhKKVFlsrnmedenrnlilrsptpsenlevnyrsspastkdelqvqdddrssppniksrslstypvlfpHPVMLEAMYRARDKVPRLPLPYSMNSPPGYPGRPAYPFINSGLLNGHPIQSPTIDLIRSQLPPLANSPKQFQEsisnntgkpkdRYACKFCGKVfprsanltrhlrthtgeqpykCKYCERSFSISSNLQRHVRNIHnkekpfkcplCDRCFGQQTNLDRHLKkheadgptilddrnGGIPSpsmihnrcrppsgILNDDSYFEEIRSFMgkvsadgnRLVQRVSSLSRANYNYYLphqedaennnniNSKKEILSPSEKDNYSSRsstsslgsthavphpprtkdvpestrektpdpvtnt
Low Complexity Region (SEG)
MVMPNTGHSSPKQASVYPLSIRVsesqeqpseeMPFDLSQNTTRSHNGPHMSPAGKPPSSPDSERHEEQPLDLRVDHKKVFLSRNMEDENRNLILRSPTPSENLEVNYRSSPASTKDELQVQDDDRSSPPNIKSRSLSTYPVLFPHPVMLEAMYRARDKVPRLPLPYSMNSPPGYPGRPAYPFINSGLLNGHPIQSPTIDLIRSQLPPLANSPKQFQESISNNTGKPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDRNGGIPSPSMIHNRCRPPSGILNDDSYFEEIRSFMGKVSADGNRLVQRVSSLSRANYNYYLPHQEDAennnninskkeilsPSEKDNYssrsstsslgsTHAVPHPPRTKDVPESTREKTPDPVTNT
Disordered region (IsUnstruct)
******************************************************************************************************************************************TYPVLFPHPVMLEAMYRARDKV*******************AYPFINSGLLNGHPI****IDL****************************RYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNL*************************************ILNDDSYFEEIRSFMGKVSADGNRLVQRVSSLSRANYNYYL******************************************************************
Disordered Region (DISOPRED)
***************************************************************************************************************************************************VML**********************PGYPGRPAYPF***************************************NTGKPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDRNG******************LNDDSYFEEIRSFMGKVSA***************************************************************************************
Disordered Region (DISEMBL)
**************SVYPLSIRVS*********************************************PLDLRVDHKKVFLSRNMEDENRNLILRSPTPSENLEVN*************************KSRSLSTYPVLFPHPVMLEAMYRARDKVPRLPLPYSMNSPPGYPGRPAYPFINSGLLNGHPIQSPTIDLIRSQLPPLANSPKQFQESISNNTGKPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDRNGGIPSPSMIHNRCRPPSGILNDDSYFEEIRSFMGKVSADGNRLVQRVSSLSRANYNYYLPHQEDAENNNNINSKKEI************************************************
Disordered Region (DISPRO)
****************************************NTTRSHNGPHMSPAGKPPSSPDSERHEEQPLDLRVDHKKVFLSRNMEDENRNLILRSPTPSENLEVNYRSSPASTKDELQVQDDDRSSPPNIKSRSLSTYPVLFPHPVMLEAMYRARDKVPRLPLPYSMNSPPGYPGRPAYPFINSGLLNGHPIQSPTIDLIRSQLPPLANSPKQFQESISNNTGKPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDRNGGIPSPSMIHNRCRPPSGILNDDSYFEEIRSFMGKVSADGNRLVQRVSSLSRANYNYYLPHQEDAENNNNINSKKEILSPSEKDNYSSRSSTSSLGSTHAVPHPPRTKDVPESTREKTPDP****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVMPNTGHSSPKQASVYPLSIRVSESQEQPSEEMPFDLSQNTTRSHNGPHMSPAGKPPSSPDSERHEEQPLDLRVDHKKVFLSRNMEDENRNLILRSPTPSENLEVNYRSSPASTKDELQVQDDDRSSPPNIKSRSLSTYPVLFPHPVMLEAMYRARDKVPRLPLPYSMNSPPGYPGRPAYPFINSGLLNGHPIQSPTIDLIRSQLPPLANSPKQFQESISNNTGKPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDRNGGIPSPSMIHNRCRPPSGILNDDSYFEEIRSFMGKVSADGNRLVQRVSSLSRANYNYYLPHQEDAENNNNINSKKEILSPSEKDNYSSRSSTSSLGSTHAVPHPPRTKDVPESTREKTPDPVTNT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	447	2.2.26 [Sep-21-2011]
B7ZRU9	1055	MDS1 and EVI1 complex loc	N/A	N/A	0.673	0.285	0.369	6e-50
B7ZRM8	1050	MDS1 and EVI1 complex loc	N/A	N/A	0.668	0.284	0.365	3e-49
P14404	1042	MDS1 and EVI1 complex loc	no	N/A	0.275	0.118	0.684	9e-49
Q03112	1051	MDS1 and EVI1 complex loc	yes	N/A	0.275	0.117	0.684	1e-48
Q8I7Z8	990	Transcription factor haml	no	N/A	0.263	0.119	0.684	3e-47
A2A935	1275	PR domain zinc finger pro	no	N/A	0.651	0.228	0.4	1e-46
Q9HAZ2	1276	PR domain zinc finger pro	no	N/A	0.288	0.101	0.637	3e-45
P08155	845	Krueppel homologous prote	no	N/A	0.284	0.150	0.392	2e-20
A2T812	754	Zinc finger protein 287 O	N/A	N/A	0.243	0.144	0.436	7e-20
Q9HBT7	754	Zinc finger protein 287 O	no	N/A	0.243	0.144	0.436	8e-20

>sp|B7ZRU9|EVI1A_XENLA MDS1 and EVI1 complex locus protein EVI1-A OS=Xenopus laevis GN=mecom-a PE=1 SV=1

 Score =  198 bits (504), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 135/365 (36%), Positives = 185/365 (50%), Gaps = 64/365 (17%)

Query: 16  VYPLSIRVSESQEQPSEEMPFDLSQNTTRSHNGPHM-SPAGKPPSSPDSERHEEQPLDLR 74
           + P S + ++  ++   E PFDL+         P++ S +G P SS     + +QPLDL 
Sbjct: 535 IEPESPKETKKVQKGKTESPFDLTTKRKEEKASPNVPSKSGAPTSS-----NHDQPLDL- 588

Query: 75  VDHKKVFLSRNMEDENRNLILRSPTPSENLEVNYRSSPASTKDELQVQDDDRSSPPNIKS 134
                     +M   +R    +   P +N                 + ++ +   P +  
Sbjct: 589 ----------SMGSRSRAATTKQTEPRKN----------------HIFNEKKDMDPELPK 622

Query: 135 RSLSTYPVLFPHPVMLEAMYRARDKVPRLPLPY----SMNSPPGYPGRPAYPF------- 183
            S        P P  ++ +YR   + P  PL       +   PG+   P +P        
Sbjct: 623 TSEHCLQHARPAPFFMDPIYRVEKRKPMDPLEILKEKYLRPSPGFLFHPQFPMPDQRTWM 682

Query: 184 -----INSGLLNGHPIQSPTIDLIRSQLPPLANSPKQFQESISNNTGKPKDRYACKFCGK 238
                +   L + + ++    +LI+S +P + N          N   K K+RY C++CGK
Sbjct: 683 SAIENMAEKLESFNALKPEANNLIQS-VPSMFNFRASSSALPENLLRKGKERYTCRYCGK 741

Query: 239 VFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFG 298
           +FPRSANLTRHLRTHTGEQPY+CKYC+RSFSISSNLQRHVRNIHNKEKPFKC LCDRCFG
Sbjct: 742 IFPRSANLTRHLRTHTGEQPYRCKYCDRSFSISSNLQRHVRNIHNKEKPFKCHLCDRCFG 801

Query: 299 QQTNLDRHLKKHEADGPTILDDRNGGI--PSPSMIHNRCRPPSGILN--DDSYFEEIRSF 354
           QQTNLDRHLKKHE          NG +   + S  H+       IL+  +DSYF EIR+F
Sbjct: 802 QQTNLDRHLKKHE----------NGNLSGTAASSPHSEIEGTGPILDEKEDSYFNEIRNF 851

Query: 355 MGKVS 359
           +G  S
Sbjct: 852 IGNSS 856

Transcriptional repressor during pronephros development. Plays a role in regionalization of the pronephros; may promote formation of the distal tubule and duct over formation of the glomus and proximal tubule.
Xenopus laevis (taxid: 8355)

>sp|B7ZRM8|EVI1B_XENLA MDS1 and EVI1 complex locus protein EVI1-B OS=Xenopus laevis GN=mecom-b PE=2 SV=1

 Score =  196 bits (499), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 132/361 (36%), Positives = 178/361 (49%), Gaps = 62/361 (17%)

Query: 16  VYPLSIRVSESQEQPSEEMPFDLSQNTTRSHNGPHMSPAGKPPSSPDSERHEEQPLDLRV 75
           V P S + S+  ++ + E  FDL+         P+   A    S+P S +HE QPLDL +
Sbjct: 532 VEPESPKESKKVQKGTTESAFDLTTKCKEEKASPN---APSKSSAPTSSKHE-QPLDLSM 587

Query: 76  DHKKVFLSRNMEDENRNLILRSPTPSENLEVNYRSSPASTKDELQVQDDDRSSPPNIKSR 135
             +    +    +  +N I                             + +     +K  
Sbjct: 588 GSRSRATTTKQTESRKNHIF---------------------------GEKKDIDSELKKT 620

Query: 136 SLSTYPVLFPHPVMLEAMYRARDKVPRLPLPY----SMNSPPGYPGRPAYPF-------- 183
           S        P P  ++ +YR   +    PL       + S  G+   P +P         
Sbjct: 621 SEHFLQHARPAPFFMDPIYRVEKRKTMDPLEVLKEKYLRSSSGFLFHPQFPLPDQRTWMS 680

Query: 184 ----INSGLLNGHPIQSPTIDLIRSQLPPLANSPKQFQESISNNTGKPKDRYACKFCGKV 239
               +   L + + ++    DLI+S +P + +          N   K K+RY C++CGK+
Sbjct: 681 AIENMAEKLESFNALKPEANDLIQS-VPSMFSFRASSSALPENLLRKGKERYTCRYCGKI 739

Query: 240 FPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQ 299
           FPRSANLTRHLRTHTGEQPY+CKYC+RSFSISSNLQRH+RNIHNKEKPFKC LCDRCFGQ
Sbjct: 740 FPRSANLTRHLRTHTGEQPYRCKYCDRSFSISSNLQRHIRNIHNKEKPFKCHLCDRCFGQ 799

Query: 300 QTNLDRHLKKHEADGPTILDDRNGGI--PSPSMIHNRCRPPSGIL--NDDSYFEEIRSFM 355
           QTNLDRHLKKHE          NG +   + S  H+       IL   +DSYF EIR+F+
Sbjct: 800 QTNLDRHLKKHE----------NGNLSGTAASSPHSEIEGTGAILEEKEDSYFNEIRNFI 849

Query: 356 G 356
           G
Sbjct: 850 G 850

Transcriptional repressor during pronephros development. Plays a role in regionalization of the pronephros; may promote formation of the distal tubule and duct over formation of the glomus and proximal tubule.

Xenopus laevis (taxid: 8355)

>sp|P14404|EVI1_MOUSE MDS1 and EVI1 complex locus protein EVI1 OS=Mus musculus GN=Mecom PE=1 SV=1

 Score =  194 bits (494), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 91/133 (68%), Positives = 104/133 (78%), Gaps = 10/133 (7%)

Query: 226 KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKE 285
           K K+RY C++CGK+FPRSANLTRHLRTHTGEQPY+CKYC+RSFSISSNLQRHVRNIHNKE
Sbjct: 719 KGKERYTCRYCGKIFPRSANLTRHLRTHTGEQPYRCKYCDRSFSISSNLQRHVRNIHNKE 778

Query: 286 KPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDRNGGIPSPSMIHNRCRPPSGILND- 344
           KPFKC LCDRCFGQQTNLDRHLKKHE        + N    + S  H+       IL+D 
Sbjct: 779 KPFKCHLCDRCFGQQTNLDRHLKKHE--------NGNMSGTATSSPHSELESAGAILDDK 830

Query: 345 -DSYFEEIRSFMG 356
            D+YF EIR+F+G
Sbjct: 831 EDAYFTEIRNFIG 843

Functions as a transcriptional regulator binding to DNA sequences in the promoter region of target genes and regulating positively or negatively their expression. Oncogene which plays a role in development, cell proliferation and differentiation. May also play a role in apoptosis through regulation of the JNK and TGF-beta signaling. Involved in hematopoiesis.

Mus musculus (taxid: 10090)

>sp|Q03112|EVI1_HUMAN MDS1 and EVI1 complex locus protein EVI1 OS=Homo sapiens GN=MECOM PE=1 SV=2

 Score =  194 bits (493), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 91/133 (68%), Positives = 104/133 (78%), Gaps = 10/133 (7%)

Query: 226 KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKE 285
           K K+RY C++CGK+FPRSANLTRHLRTHTGEQPY+CKYC+RSFSISSNLQRHVRNIHNKE
Sbjct: 728 KGKERYTCRYCGKIFPRSANLTRHLRTHTGEQPYRCKYCDRSFSISSNLQRHVRNIHNKE 787

Query: 286 KPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDRNGGIPSPSMIHNRCRPPSGILND- 344
           KPFKC LCDRCFGQQTNLDRHLKKHE        + N    + S  H+       IL+D 
Sbjct: 788 KPFKCHLCDRCFGQQTNLDRHLKKHE--------NGNMSGTATSSPHSELESTGAILDDK 839

Query: 345 -DSYFEEIRSFMG 356
            D+YF EIR+F+G
Sbjct: 840 EDAYFTEIRNFIG 852

Functions as a transcriptional regulator binding to DNA sequences in the promoter region of target genes and regulating positively or negatively their expression. Oncogene which plays a role in development, cell proliferation and differentiation. May also play a role in apoptosis through regulation of the JNK and TGF-beta signaling. Involved in hematopoiesis.

Homo sapiens (taxid: 9606)

>sp|Q8I7Z8|HAM_DROME Transcription factor hamlet OS=Drosophila melanogaster GN=ham PE=2 SV=1

 Score =  189 bits (480), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 91/133 (68%), Positives = 103/133 (77%), Gaps = 15/133 (11%)

Query: 226 KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKE 285
           K KDRY+CKFCGKVFPRSANLTRHLRTHTGEQPY CKYC+R+FSISSNLQRHVRNIHNKE
Sbjct: 812 KTKDRYSCKFCGKVFPRSANLTRHLRTHTGEQPYPCKYCDRAFSISSNLQRHVRNIHNKE 871

Query: 286 KPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDRNGGIPSPSMIHNRCRPPSGILNDD 345
           +PF+C LCDR FGQQTNLDRH+KKHE++G    D       SPS         SGI   +
Sbjct: 872 RPFRCELCDRSFGQQTNLDRHVKKHESEGNNFRD-------SPS--------SSGIAERE 916

Query: 346 SYFEEIRSFMGKV 358
            YF++IR FM +V
Sbjct: 917 EYFDDIRKFMNRV 929

Transcription factor that plays a crucial role in external sensory organ (ESO) that elaborates from a single precursor cell (ESOP cell). Mediates the differentiation of lineage branch that generates the internal 'ES' and 'th' cells (external sensory neuron and thecogen cells, respectively) from the IIIB cell. Its absence leads to re-specification of IIIB daughter cells into external tormagen cells (tr cells), or internal multidendritic neurons (MD cells). One of its role in the development of the ESO lineage is to modulate the activity of Notch and PAX2 signals.

Drosophila melanogaster (taxid: 7227)

>sp|A2A935|PRD16_MOUSE PR domain zinc finger protein 16 OS=Mus musculus GN=Prdm16 PE=1 SV=1

 Score =  187 bits (475), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 140/350 (40%), Positives = 184/350 (52%), Gaps = 59/350 (16%)

Query: 30   PSEEMPFDLSQNTTRSHNGPHMSPAGKPPSSPDSERHEEQPLDLRVDHK-KVFLSRNMED 88
            PS E PFDL   TT+         A K P  P S   EEQPLDL +  + +   +    +
Sbjct: 768  PSAECPFDL---TTKPKEAKPALLAPKVPLIPSS--GEEQPLDLSIGSRARASQNGGGRE 822

Query: 89   ENRNLIL--RSPTPSENLEVNYRSSPASTKDELQVQDDDRSSPPNIKSRSLSTYPVLF-- 144
              +N +   R P  SE L                         P +    L   P L   
Sbjct: 823  PRKNHVYGERKPGVSEGL-------------------------PKVCPAQLPQQPSLHYA 857

Query: 145  -PHPVMLEAMYRAR-----DKVPRLPLPYSMNSPPGY-PGRPAYPFINSGLLNGHPIQSP 197
             P P  ++ +YR       D V  L   Y   SP  + P   A   +   L +   +++ 
Sbjct: 858  KPSPFFMDPIYRVEKRKVADPVGVLKEKYLRPSPLLFHPQMSAIETMTEKLESFAAMKAD 917

Query: 198  TIDLIRSQLPPLANSPKQFQE---SISN-NTGKPKDRYACKFCGKVFPRSANLTRHLRTH 253
            +     S L PL + P  F+    ++S+    K K+RY C++CGK+FPRSANLTRHLRTH
Sbjct: 918  S----GSSLQPLPHHPFNFRSPPPTLSDPILRKGKERYTCRYCGKIFPRSANLTRHLRTH 973

Query: 254  TGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEAD 313
            TGEQPY+CKYC+RSFSISSNLQRHVRNIHNKEKPFKC LC+RCFGQQTNLDRHLKKHE +
Sbjct: 974  TGEQPYRCKYCDRSFSISSNLQRHVRNIHNKEKPFKCHLCNRCFGQQTNLDRHLKKHEHE 1033

Query: 314  GPTILDDRNGGIPSPSMIHNRCRPPS-----GILN--DDSYFEEIRSFMG 356
            G  +   ++ G+ +  +  +   P S      +L+  +DSYF EIR+F+ 
Sbjct: 1034 GAPV--SQHSGVLTNHLGTSASSPTSESDNHALLDEKEDSYFSEIRNFIA 1081

Binds DNA and functions as a transcriptional regulator. Functions in the differentiation of brown adipose tissue (BAT) which is specialized in dissipating chemical energy in the form of heat in response to cold or excess feeding while white adipose tissue (WAT) is specialized in the storage of excess energy and the control of systemic metabolism. Together with CEBPB, regulates the differentiation of myoblastic precursors into brown adipose cells. Functions also as a repressor of TGF-beta signaling. May regulate granulocytes differentiation.

Mus musculus (taxid: 10090)

>sp|Q9HAZ2|PRD16_HUMAN PR domain zinc finger protein 16 OS=Homo sapiens GN=PRDM16 PE=1 SV=3

 Score =  183 bits (464), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 88/138 (63%), Positives = 108/138 (78%), Gaps = 9/138 (6%)

Query: 226  KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKE 285
            K K+RY C++CGK+FPRSANLTRHLRTHTGEQPY+CKYC+RSFSISSNLQRHVRNIHNKE
Sbjct: 946  KGKERYTCRYCGKIFPRSANLTRHLRTHTGEQPYRCKYCDRSFSISSNLQRHVRNIHNKE 1005

Query: 286  KPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDRNGGIPSPSMIHNRCRPPS-----G 340
            KPFKC LC+RCFGQQTNLDRHLKKHE +   +   ++ G+ +  +  +   P S      
Sbjct: 1006 KPFKCHLCNRCFGQQTNLDRHLKKHEHENAPV--SQHPGVLTNHLGTSASSPTSESDNHA 1063

Query: 341  ILN--DDSYFEEIRSFMG 356
            +L+  +DSYF EIR+F+ 
Sbjct: 1064 LLDEKEDSYFSEIRNFIA 1081

Binds DNA and functions as a transcriptional regulator. Functions in the differentiation of brown adipose tissue (BAT) which is specialized in dissipating chemical energy in the form of heat in response to cold or excess feeding while white adipose tissue (WAT) is specialized in the storage of excess energy and the control of systemic metabolism. Together with CEBPB, regulates the differentiation of myoblastic precursors into brown adipose cells. Functions also as a repressor of TGF-beta signaling. Isoform 4 may regulate granulocytes differentiation.

Homo sapiens (taxid: 9606)

>sp|P08155|KRUH_DROME Krueppel homologous protein 1 OS=Drosophila melanogaster GN=Kr-h1 PE=2 SV=2

 Score =  100 bits (249), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 51/130 (39%), Positives = 68/130 (52%), Gaps = 3/130 (2%)

Query: 186 SGLLNGHPIQSPTIDLIRSQLPPLANSPKQFQESISNNTGKPKDRYACKFCGKVFPRSAN 245
           SG     P+ +  I+L  + LP     PK        N     D Y C  C K F   A 
Sbjct: 228 SGAGVAAPVSTAAIELNDAGLP--VGIPKSPTIKPLANVAAGADPYQCNVCQKTFAVPAR 285

Query: 246 LTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDR 305
           L RH RTHTGE+P++C++C + FS+  NLQ H R IH KE+P+KC +C R F     L R
Sbjct: 286 LIRHYRTHTGERPFECEFCHKLFSVKENLQVH-RRIHTKERPYKCDVCGRAFEHSGKLHR 344

Query: 306 HLKKHEADGP 315
           H++ H  + P
Sbjct: 345 HMRIHTGERP 354

Plays a general role in the hierarchies of gene expression leading to metamorphosis.

Drosophila melanogaster (taxid: 7227)

>sp|A2T812|ZN287_PONPY Zinc finger protein 287 OS=Pongo pygmaeus GN=ZNF287 PE=3 SV=1

 Score = 99.0 bits (245), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 48/110 (43%), Positives = 66/110 (60%), Gaps = 1/110 (0%)

Query: 231 YACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
           Y C  CGK F +SANLT+H RTHTGE+PYKC  C ++FS S +L +H R IHN EKPFKC
Sbjct: 585 YICNICGKAFSQSANLTQHHRTHTGEKPYKCSVCGKAFSQSVHLTQHQR-IHNGEKPFKC 643

Query: 291 PLCDRCFGQQTNLDRHLKKHEADGPTILDDRNGGIPSPSMIHNRCRPPSG 340
            +C + + Q  NL +H + H  + P   ++        S ++   R  +G
Sbjct: 644 NICGKAYRQGANLTQHQRIHTGEKPYKCNECGKAFIYSSSLNQHQRTHTG 693

May be involved in transcriptional regulation.

Pongo pygmaeus (taxid: 9600)

>sp|Q9HBT7|ZN287_HUMAN Zinc finger protein 287 OS=Homo sapiens GN=ZNF287 PE=2 SV=1

 Score = 98.6 bits (244), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 48/110 (43%), Positives = 66/110 (60%), Gaps = 1/110 (0%)

Query: 231 YACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
           Y C  CGK F +SANLT+H RTHTGE+PYKC  C ++FS S +L +H R IHN EKPFKC
Sbjct: 585 YICNICGKAFSQSANLTQHHRTHTGEKPYKCSVCGKAFSQSVHLTQHQR-IHNGEKPFKC 643

Query: 291 PLCDRCFGQQTNLDRHLKKHEADGPTILDDRNGGIPSPSMIHNRCRPPSG 340
            +C + + Q  NL +H + H  + P   ++        S ++   R  +G
Sbjct: 644 NICGKAYRQGANLTQHQRIHTGEKPYKCNECGKAFIYSSSLNQHQRTHTG 693

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	447
242020555	480	conserved hypothetical protein [Pediculu	0.738	0.687	0.569	1e-100
189240185	451	PREDICTED: similar to CG10348 CG10348-PA	0.724	0.718	0.581	6e-95
270012296	427	hypothetical protein TcasGA2_TC006419 [T	0.724	0.758	0.570	1e-94
328722031	640	PREDICTED: hypothetical protein LOC10016	0.510	0.356	0.621	4e-73
350416228	451	PREDICTED: hypothetical protein LOC10074	0.648	0.643	0.465	3e-72
340711673	452	PREDICTED: hypothetical protein LOC10064	0.648	0.641	0.464	3e-72
380030371	458	PREDICTED: uncharacterized protein LOC10	0.689	0.672	0.477	5e-70
189240183	819	PREDICTED: similar to conserved hypothet	0.550	0.300	0.488	8e-58
270012294	933	hypothetical protein TcasGA2_TC006417 [T	0.545	0.261	0.485	8e-58
328783956	1202	PREDICTED: hypothetical protein LOC72579	0.284	0.105	0.748	2e-56

>gi|242020555|ref|XP_002430718.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212515908|gb|EEB17980.1| conserved hypothetical protein [Pediculus humanus corporis]

 Score =  370 bits (950), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 220/386 (56%), Positives = 260/386 (67%), Gaps = 56/386 (14%)

Query: 1   MVMPNTGHSSPKQASVYPLSIRVSESQEQ--PSEEMPFDLSQNTTRSHNGPHMSPAGKPP 58
           M++P++GHSSPKQA+VYPL+IRV +  +Q    +EMPFDLS+NT  +  GPHMSPAG+PP
Sbjct: 35  MLVPSSGHSSPKQAAVYPLTIRVPDDNQQHNAGDEMPFDLSRNTRSA--GPHMSPAGRPP 92

Query: 59  SSPDSERHEEQPLDLRVDHKKVFLSRN-MEDENRNLILRSPTPSENLEVNYRSSPASTKD 117
             P  E   EQPLDLRVD+KK+ L R  +EDEN+N+ILRSP+P+ +     +  PAS   
Sbjct: 93  PGPTDE---EQPLDLRVDYKKLSLQRRRIEDENQNVILRSPSPTSSPPSKEQIIPASDIR 149

Query: 118 ELQVQDDDRSSPPNIKSRSLSTYPVLFPH----PVMLEAMYRARDKVPRLPLPYSMNSPP 173
           +  V    +SS    K    S YP+LFPH    P MLEAMYR  DK  RLP+P+ + SPP
Sbjct: 150 QSPVSPRSQSSSERSKESPSSPYPLLFPHQPLHPFMLEAMYRNVDKSARLPIPFPV-SPP 208

Query: 174 GYPGRPAYPFINSGLLNGHPIQSPTIDLIRSQLPPLANSPKQFQESISNNTGKPKDRYAC 233
           GY   P  PF+           SP                           GK KDRYAC
Sbjct: 209 GY-APPTRPFV---------FPSP---------------------------GKLKDRYAC 231

Query: 234 KFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLC 293
           KFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC LC
Sbjct: 232 KFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCQLC 291

Query: 294 DRCFGQQTNLDRHLKKHEADGPTILDD----RNGGIPSPSMIHNRCRPPS-GILNDDSYF 348
           +RCFGQQTNLDRHLKKHEADGPTILDD    R+     P   H     PS GI++D+SYF
Sbjct: 292 ERCFGQQTNLDRHLKKHEADGPTILDDHRHSRSSMYQHPKQGHRLSLLPSQGIMSDESYF 351

Query: 349 EEIRSFMGKVSADGNRLVQRVSSLSR 374
           EEIRSFMGKV+++G R+V  +++L R
Sbjct: 352 EEIRSFMGKVTSEG-RMVDPMAALLR 376

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189240185|ref|XP_001815516.1| PREDICTED: similar to CG10348 CG10348-PA [Tribolium castaneum]

 Score =  354 bits (908), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 222/382 (58%), Positives = 265/382 (69%), Gaps = 58/382 (15%)

Query: 1   MVMPNTGHSSPKQASVYPLSIRVSESQEQPSEEMPFDLSQNTTRSHNGPHMSPAGKPPSS 60
           M++ + GHSSPKQA+VYPLSIRV      P +EMPFDLS+NT     GPHMSPAG+PP  
Sbjct: 35  MLVASGGHSSPKQAAVYPLSIRVP-----PGDEMPFDLSRNTRSP--GPHMSPAGRPPPG 87

Query: 61  PDSERHEEQPLDLRVDHKKV---FLSRNMEDENRNLILRSPTPSENLEVNYRSSPASTKD 117
           P  +  ++QPLDLRV+HKK+    + R +EDENRNLI  SP  S N          S KD
Sbjct: 88  P--QDGDDQPLDLRVEHKKLSLMIIRRQVEDENRNLI--SPAVSVN----------SDKD 133

Query: 118 ELQVQDDDRSSP----PNIKSRSLSTYP-VLFP----HPVMLEAMYRAR-DKVPRLPLPY 167
           ++ V  D+RSSP    P   S  +  YP +LFP    HP+MLEAMYRA+ DKVPRLPLPY
Sbjct: 134 DVIV--DERSSPTHSVPKTFSPQIPGYPGMLFPPQPIHPMMLEAMYRAQGDKVPRLPLPY 191

Query: 168 SMNSPPGYPGRPAYPFINSGLLNGHPIQSPTIDLIRSQLPPLANSPKQFQESISNNTGKP 227
             +          YPF++  +L+  P+     D++R+   P   +PK +  +     GK 
Sbjct: 192 PSSP---PGYPQRYPFLSPSMLSP-PVNQVPFDMLRN---PTPQTPKVYDTA----GGKM 240

Query: 228 KDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKP 287
           KDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC+YCERSFSISSNLQRHVRNIHNKEKP
Sbjct: 241 KDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCRYCERSFSISSNLQRHVRNIHNKEKP 300

Query: 288 FKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDRNGGIPSPSMIHNRCRPPSGILNDDSY 347
           FKCPLC+RCFGQQTNLDRHLKKHEADGPTILD+RN        +  R    S  L+++SY
Sbjct: 301 FKCPLCERCFGQQTNLDRHLKKHEADGPTILDERN--------LQRRTM-ASRNLSEESY 351

Query: 348 FEEIRSFMGKVSADGNRLVQRV 369
           FEEIRSFMGKV+ DG RL+Q +
Sbjct: 352 FEEIRSFMGKVT-DG-RLLQHL 371

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270012296|gb|EFA08744.1| hypothetical protein TcasGA2_TC006419 [Tribolium castaneum]

 Score =  353 bits (906), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 218/382 (57%), Positives = 260/382 (68%), Gaps = 58/382 (15%)

Query: 1   MVMPNTGHSSPKQASVYPLSIRVSESQEQPSEEMPFDLSQNTTRSHNGPHMSPAGKPPSS 60
           M++ + GHSSPKQA+VYPLSIRV      P +EMPFDLS+NT     GPHMSPAG+PP  
Sbjct: 11  MLVASGGHSSPKQAAVYPLSIRVP-----PGDEMPFDLSRNTRSP--GPHMSPAGRPPPG 63

Query: 61  PDSERHEEQPLDLRVDHKKV---FLSRNMEDENRNLILRSPTPSENLEVNYRSSPASTKD 117
           P  +  ++QPLDLRV+HKK+    + R +EDENRNLI  SP  S N          S KD
Sbjct: 64  P--QDGDDQPLDLRVEHKKLSLMIIRRQVEDENRNLI--SPAVSVN----------SDKD 109

Query: 118 ELQVQDDDRSSP----PNIKSRSLSTYP-VLFP----HPVMLEAMYRAR-DKVPRLPLPY 167
           ++ V  D+RSSP    P   S  +  YP +LFP    HP+MLEAMYRA+ DKVPRL    
Sbjct: 110 DVIV--DERSSPTHSVPKTFSPQIPGYPGMLFPPQPIHPMMLEAMYRAQGDKVPRL---P 164

Query: 168 SMNSPPGYPGRPAYPFINSGLLNGHPIQSPTIDLIRSQLPPLANSPKQFQESISNNTGKP 227
                        YPF++  +L+  P+     D++R+   P   +PK +  +     GK 
Sbjct: 165 LPYPSSPPGYPQRYPFLSPSMLSP-PVNQVPFDMLRN---PTPQTPKVYDTA----GGKM 216

Query: 228 KDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKP 287
           KDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC+YCERSFSISSNLQRHVRNIHNKEKP
Sbjct: 217 KDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCRYCERSFSISSNLQRHVRNIHNKEKP 276

Query: 288 FKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDRNGGIPSPSMIHNRCRPPSGILNDDSY 347
           FKCPLC+RCFGQQTNLDRHLKKHEADGPTILD+RN        +  R    S  L+++SY
Sbjct: 277 FKCPLCERCFGQQTNLDRHLKKHEADGPTILDERN--------LQRRTM-ASRNLSEESY 327

Query: 348 FEEIRSFMGKVSADGNRLVQRV 369
           FEEIRSFMGKV+ DG RL+Q +
Sbjct: 328 FEEIRSFMGKVT-DG-RLLQHL 347

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328722031|ref|XP_001947307.2| PREDICTED: hypothetical protein LOC100167703 [Acyrthosiphon pisum]

 Score =  281 bits (719), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 156/251 (62%), Positives = 178/251 (70%), Gaps = 23/251 (9%)

Query: 137 LSTYPVLFP----HPVMLEAMYRARDKVPRLPLPYSM---NSPPGYPGRPA--YPFINSG 187
           +  YPVLFP    HP+MLEA+YRA     +  +P S+    +  GY  RP+  YPFINS 
Sbjct: 303 MVNYPVLFPPQPLHPMMLEAIYRAGAVGDKSRMPSSLAGYQTGGGY-HRPSQHYPFINSP 361

Query: 188 LLNGHP-IQSPTIDLIRSQLPP-----LANSPKQFQESISNNTGKPKDRYACKFCGKVFP 241
           LLNGH  +  PT D++R   PP     +A SP+Q   +    +GKPKDRY+CKFC KVFP
Sbjct: 362 LLNGHHHVPPPTYDVVRQPPPPPLPPPVARSPQQKSSAFQETSGKPKDRYSCKFCQKVFP 421

Query: 242 RSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQT 301
           RSANLTRHLRTHTGEQPYKC YCERSFSISSNLQRHVRNIHNKEKPFKCPLC+RCFGQQT
Sbjct: 422 RSANLTRHLRTHTGEQPYKCNYCERSFSISSNLQRHVRNIHNKEKPFKCPLCERCFGQQT 481

Query: 302 NLDRHLKKHEADGPTILDDR------NGGIPSPSMIHNRCRPPSG-ILNDDSYFEEIRSF 354
           NLDRHLKKHEADGPTI+DDR           + +    R RP  G    D+SYFEEIRSF
Sbjct: 482 NLDRHLKKHEADGPTIMDDRLSSSAAVVAAAAAAAAAERRRPSRGPGAGDESYFEEIRSF 541

Query: 355 MGKVSADGNRL 365
           MGKVS DG+R 
Sbjct: 542 MGKVSEDGSRF 552

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350416228|ref|XP_003490881.1| PREDICTED: hypothetical protein LOC100748733 [Bombus impatiens]

 Score =  279 bits (713), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 188/404 (46%), Positives = 220/404 (54%), Gaps = 114/404 (28%)

Query: 7   GHSSPKQASVYPLSIRVSESQEQPSEEMPFDLSQ----------NTTRSHNGPHMSPAGK 56
           GH SPKQAS+YPLS+RV +      EE+P+DLS           N  +    PHMSPA +
Sbjct: 36  GHISPKQASIYPLSVRVPDV-----EELPYDLSHGHGRGLSSPTNQQQHRQQPHMSPAAR 90

Query: 57  PPSSPDSERHEEQPLDLRVDHKKVFLSRNMEDENRNLILRSPTPSENLEVNYRSSPASTK 116
           PP S   E  + +PLDLRVDHKK  L+    DEN+N                        
Sbjct: 91  PPQSHHQEDLDCEPLDLRVDHKKERLT----DENQN------------------------ 122

Query: 117 DELQVQDDDRSSPPNIKSRSLSTYPVLFP-----HPVMLEAMYRAR---DKVPRLP---- 164
            E++V +       N    SL  + VLFP     HP++LEAMYR+      VP LP    
Sbjct: 123 -EIEVLNQ------NSLGGSLPYHTVLFPQHHAVHPLVLEAMYRSHHHSSSVPDLPKIQV 175

Query: 165 --LPYSMNSPPGYPGRPAYPFINSGLLNGHPIQSPTIDLIR------------------- 203
             LP  +  PP           +S       + SP+                        
Sbjct: 176 RALPTMVPLPPNRFSSTTSSTSSSSSQAAARVPSPSSGQQHQPQQQSHSSQQQQQQQQQQ 235

Query: 204 --SQLPPLANSPKQFQESISNNTG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYK 260
             S LPP          SIS   G KPKDRY+CKFCGKVFPRSANLTRHLRTHTGEQPYK
Sbjct: 236 QASNLPPY---------SISVQAGLKPKDRYSCKFCGKVFPRSANLTRHLRTHTGEQPYK 286

Query: 261 CKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDD 320
           CKYCERSFSISSNLQRHVRNIHNKEKPFKCPLC+RCFGQQTNLDRHLKKH+ADGPTILD+
Sbjct: 287 CKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCERCFGQQTNLDRHLKKHDADGPTILDE 346

Query: 321 ----RNGGIPSPSMIHNRCRPPSGILNDDSYFEEIRSFMGKVSA 360
                +G +P                 D+SYFEEIRSFMGK+++
Sbjct: 347 VRSRYHGQLPR---------------ADESYFEEIRSFMGKITS 375

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340711673|ref|XP_003394396.1| PREDICTED: hypothetical protein LOC100646056 [Bombus terrestris]

 Score =  278 bits (712), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 188/405 (46%), Positives = 220/405 (54%), Gaps = 115/405 (28%)

Query: 7   GHSSPKQASVYPLSIRVSESQEQPSEEMPFDLSQ----------NTTRSHNGPHMSPAGK 56
           GH SPKQAS+YPLS+RV +      EE+P+DLS           N  +    PHMSPA +
Sbjct: 36  GHISPKQASIYPLSVRVPDV-----EELPYDLSHGHGRGLSSPTNQQQHRQQPHMSPAAR 90

Query: 57  PPSSPDSERHEEQPLDLRVDHKKVFLSRNMEDENRNLILRSPTPSENLEVNYRSSPASTK 116
           PP S   E  + +PLDLRVDHKK  L+    DEN+N                        
Sbjct: 91  PPQSHHQEDLDCEPLDLRVDHKKERLT----DENQN------------------------ 122

Query: 117 DELQVQDDDRSSPPNIKSRSLSTYPVLFP-----HPVMLEAMYRAR---DKVPRLP---- 164
            E++V +       N    SL  + VLFP     HP++LEAMYR+      VP LP    
Sbjct: 123 -EIEVLNQ------NSLGGSLPYHTVLFPQHHAVHPLVLEAMYRSHHHSSSVPDLPKIQV 175

Query: 165 --LPYSMNSPPGYPGRPAYPFINSGLLNGHPIQSPT----------------------ID 200
             LP  +  PP           +S       + SP+                        
Sbjct: 176 RALPTMVPLPPNRFSSTTSSTSSSSSQAAARVPSPSGGQQHQPQQQSHSSQQQQQQQQQQ 235

Query: 201 LIRSQLPPLANSPKQFQESISNNTG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPY 259
              S LPP          SIS   G KPKDRY+CKFCGKVFPRSANLTRHLRTHTGEQPY
Sbjct: 236 QQASNLPPY---------SISVQAGLKPKDRYSCKFCGKVFPRSANLTRHLRTHTGEQPY 286

Query: 260 KCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILD 319
           KCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLC+RCFGQQTNLDRHLKKH+ADGPTILD
Sbjct: 287 KCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCERCFGQQTNLDRHLKKHDADGPTILD 346

Query: 320 D----RNGGIPSPSMIHNRCRPPSGILNDDSYFEEIRSFMGKVSA 360
           +     +G +P                 D+SYFEEIRSFMGK+++
Sbjct: 347 EVRSRYHGQLPR---------------ADESYFEEIRSFMGKITS 376

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380030371|ref|XP_003698822.1| PREDICTED: uncharacterized protein LOC100872987 [Apis florea]

 Score =  271 bits (693), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 187/392 (47%), Positives = 221/392 (56%), Gaps = 84/392 (21%)

Query: 7   GHSSPKQASVYPLSIRVSESQEQPSEEMPFDLSQ----------NTTRSHNGPHMSPAGK 56
           GH SPKQAS+YPLS+RV +      EE+P+DLS           N  +    PHMSPA +
Sbjct: 36  GHISPKQASIYPLSVRVPDV-----EELPYDLSHGHGRGLSSPTNQQQHRQQPHMSPAAR 90

Query: 57  PPSSPDSERHE-EQPLDLRVDHKKVFLSRNMEDENRNLILRSPTPSENLEVNYRSSPAST 115
           PP S   E  +  +PLDLRVDHKK  L+    DEN+N I       E L  N        
Sbjct: 91  PPQSHHQEDLDCVEPLDLRVDHKKERLT----DENQNEI-------EVLNQNSLGGSGGG 139

Query: 116 KDELQVQDDDRSSPPNIKSRSLSTYPVLFP-----HPVMLEAMYRAR---DKVPRLP--- 164
                                +  + VLFP     HP++LEAMYR+      VP LP   
Sbjct: 140 GG---------------GGGGIPYHTVLFPQHHTVHPLVLEAMYRSHHHGSSVPDLPKIQ 184

Query: 165 ---LPYSMNSPPGYPGRPAYPFINSGLLNGHPIQSPTIDLIRSQLPPLANSPKQFQE--- 218
              LP  +  PP      A    +        + SP+        P  ++S +Q Q+   
Sbjct: 185 VRALPTMVPLPPNRFSSTASTASSVSSQAAGRVPSPSAGQQHQPSPQQSHSSQQQQQAPS 244

Query: 219 -----SISNNTG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISS 272
                SIS   G KPKDRY+CKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISS
Sbjct: 245 AIPPYSISVQAGLKPKDRYSCKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISS 304

Query: 273 NLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDD----RNGGIPSP 328
           NLQRHVRNIHNKEKPFKCPLC+RCFGQQTNLDRHLKKH+ADGPTILD+     +G +P  
Sbjct: 305 NLQRHVRNIHNKEKPFKCPLCERCFGQQTNLDRHLKKHDADGPTILDEVRSRYHGQLPR- 363

Query: 329 SMIHNRCRPPSGILNDDSYFEEIRSFMGKVSA 360
                          D+SYFEEIRSFMGK+++
Sbjct: 364 --------------ADESYFEEIRSFMGKITS 381

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189240183|ref|XP_975197.2| PREDICTED: similar to conserved hypothetical protein [Tribolium castaneum]

 Score =  231 bits (588), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 148/303 (48%), Positives = 180/303 (59%), Gaps = 57/303 (18%)

Query: 68  EQPLDLRVDHKKVFLSR-NMEDENRNLILRSPTPSENLEVNYRSSPASTKDELQVQDDDR 126
           +QPLDL +  KK    +  ++ E R+L+   P P E              ++++V D + 
Sbjct: 507 DQPLDLSLGWKKTRTEKPQIKHEIRDLL---PKPKE--------------EKIEVVDLEE 549

Query: 127 SSPPNIKSRSLSTYPVLFPHPV--MLEAMYRARDKVPRLPLPYSMNS-PPGYPGRPAYPF 183
                 K   LST P+ +P P+  M   MYR     P   L  +    PP +   P +PF
Sbjct: 550 D-----KKEVLSTPPMAYPRPIHPMFLEMYR-----PNFQLQNNDRLLPPAF--GPRFPF 597

Query: 184 INSGLLNGHPIQSPTIDLIRSQLPPLANSPKQFQESISNNT-GKPKDRYACKFCGKVFPR 242
           +NS       + S  IDL+R  L   ++ P  F + I     GK KDRYACKFCGKVFPR
Sbjct: 598 LNS-------LPSHRIDLLRPGLQNFSSKP--FHDMIQQQAQGKMKDRYACKFCGKVFPR 648

Query: 243 SANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTN 302
           SANLTRHLRTHTGEQPYKC+YCERSFSISSNLQRHVRNIHNKEKPFKCPLC+RCFGQQTN
Sbjct: 649 SANLTRHLRTHTGEQPYKCRYCERSFSISSNLQRHVRNIHNKEKPFKCPLCERCFGQQTN 708

Query: 303 LDRHLKKHEADGPTILDDRNGGIPSPSMIHNRCRPPSGILN--DDSYFEEIRSFMGKVSA 360
           LDRHLKKHEA      DD +GG+           P S   N  +D+ F+EIRSFMGKV+ 
Sbjct: 709 LDRHLKKHEA------DDGSGGVAVAD------SPGSSNENEREDACFDEIRSFMGKVTY 756

Query: 361 DGN 363
            G 
Sbjct: 757 AGG 759

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270012294|gb|EFA08742.1| hypothetical protein TcasGA2_TC006417 [Tribolium castaneum]

 Score =  230 bits (587), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 148/305 (48%), Positives = 181/305 (59%), Gaps = 61/305 (20%)

Query: 68  EQPLDLRVDHKKVFLSR-NMEDENRNLILRSPTPSENLEVNYRSSPASTKDELQVQDDDR 126
           +QPLDL +  KK    +  ++ E R+L+   P P E              ++++V D + 
Sbjct: 621 DQPLDLSLGWKKTRTEKPQIKHEIRDLL---PKPKE--------------EKIEVVDLEE 663

Query: 127 SSPPNIKSRSLSTYPVLFPHPV--MLEAMYRARDKVP---RLPLPYSMNSPPGYPGRPAY 181
                 K   LST P+ +P P+  M   MYR   ++    RL        PP +   P +
Sbjct: 664 D-----KKEVLSTPPMAYPRPIHPMFLEMYRPNFQLQNNDRL-------LPPAFG--PRF 709

Query: 182 PFINSGLLNGHPIQSPTIDLIRSQLPPLANSPKQFQESISNNT-GKPKDRYACKFCGKVF 240
           PF+NS       + S  IDL+R  L   ++ P  F + I     GK KDRYACKFCGKVF
Sbjct: 710 PFLNS-------LPSHRIDLLRPGLQNFSSKP--FHDMIQQQAQGKMKDRYACKFCGKVF 760

Query: 241 PRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQ 300
           PRSANLTRHLRTHTGEQPYKC+YCERSFSISSNLQRHVRNIHNKEKPFKCPLC+RCFGQQ
Sbjct: 761 PRSANLTRHLRTHTGEQPYKCRYCERSFSISSNLQRHVRNIHNKEKPFKCPLCERCFGQQ 820

Query: 301 TNLDRHLKKHEADGPTILDDRNGGIPSPSMIHNRCRPPSGILN--DDSYFEEIRSFMGKV 358
           TNLDRHLKKHEA      DD +GG+           P S   N  +D+ F+EIRSFMGKV
Sbjct: 821 TNLDRHLKKHEA------DDGSGGVAVAD------SPGSSNENEREDACFDEIRSFMGKV 868

Query: 359 SADGN 363
           +  G 
Sbjct: 869 TYAGG 873

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328783956|ref|XP_001121599.2| PREDICTED: hypothetical protein LOC725792 [Apis mellifera]

 Score =  226 bits (575), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 110/147 (74%), Positives = 120/147 (81%), Gaps = 20/147 (13%)

Query: 219  SISNNTG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRH 277
            SIS   G KPKDRY+CKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRH
Sbjct: 995  SISVQAGLKPKDRYSCKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRH 1054

Query: 278  VRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDD----RNGGIPSPSMIHN 333
            VRNIHNKEKPFKCPLC+RCFGQQTNLDRHLKKH+ADGPTILD+     +G +P       
Sbjct: 1055 VRNIHNKEKPFKCPLCERCFGQQTNLDRHLKKHDADGPTILDEVRSRYHGQLPRA----- 1109

Query: 334  RCRPPSGILNDDSYFEEIRSFMGKVSA 360
                      D+SYFEEIRSFMGK+++
Sbjct: 1110 ----------DESYFEEIRSFMGKITS 1126

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	447
FB|FBgn0032707	540	CG10348 [Drosophila melanogast	0.284	0.235	0.742	3.8e-56
UNIPROTKB|D6RFY3	1177	PRDM16 "PR domain zinc finger	0.335	0.127	0.582	1.6e-49
UNIPROTKB|D6RDW0	1178	PRDM16 "PR domain zinc finger	0.335	0.127	0.582	1.7e-49
UNIPROTKB|D3YTA5	1256	PRDM16 "PR domain zinc finger	0.335	0.119	0.582	2.5e-49
UNIPROTKB|F8WEV3	1275	PRDM16 "PR domain zinc finger	0.335	0.117	0.582	2.7e-49
UNIPROTKB|Q9HAZ2	1276	PRDM16 "PR domain zinc finger	0.335	0.117	0.582	2.7e-49
UNIPROTKB|J9P0I6	1156	PRDM16 "Uncharacterized protei	0.335	0.129	0.576	3.9e-49
UNIPROTKB|F1Q029	1259	PRDM16 "Uncharacterized protei	0.335	0.119	0.576	6.7e-49
UNIPROTKB|H0YA13	1084	PRDM16 "PR domain zinc finger	0.335	0.138	0.582	8.7e-49
UNIPROTKB|F1P809	1114	MECOM "Uncharacterized protein	0.469	0.188	0.491	1.2e-48

FB|FBgn0032707 CG10348 [Drosophila melanogaster (taxid:7227)]

 Score = 523 (189.2 bits), Expect = 3.8e-56, Sum P(2) = 3.8e-56
 Identities = 98/132 (74%), Positives = 108/132 (81%)

Query:   228 KDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKP 287
             KDRY CKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKE+P
Sbjct:   308 KDRYTCKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKERP 367

Query:   288 FKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDRNGGIPSPSMIHNRCRPPSGILNDDSY 347
             FKC +C+RCFGQQTNLDRHLKKHE+D  + L   +G       I   C  P+    ++SY
Sbjct:   368 FKCEICERCFGQQTNLDRHLKKHESDAVS-LSALSGVSERMHCIRRFCENPT----EESY 422

Query:   348 FEEIRSFMGKVS 359
             FEEIRSFMGKV+
Sbjct:   423 FEEIRSFMGKVT 434

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|D6RFY3 PRDM16 "PR domain zinc finger protein 16" [Homo sapiens (taxid:9606)]

 Score = 480 (174.0 bits), Expect = 1.6e-49, Sum P(3) = 1.6e-49
 Identities = 95/163 (58%), Positives = 120/163 (73%)

Query:   204 SQLPPLANSPKQFQE---SISNNT-GKPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPY 259
             S L PL + P  F+    ++S+    K K+RY C++CGK+FPRSANLTRHLRTHTGEQPY
Sbjct:   920 SSLQPLPHHPFNFRSPPPTLSDPILRKGKERYTCRYCGKIFPRSANLTRHLRTHTGEQPY 979

Query:   260 KCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILD 319
             +CKYC+RSFSISSNLQRHVRNIHNKEKPFKC LC+RCFGQQTNLDRHLKKHE +   +  
Sbjct:   980 RCKYCDRSFSISSNLQRHVRNIHNKEKPFKCHLCNRCFGQQTNLDRHLKKHEHENAPV-- 1037

Query:   320 DRNGGIPSPSMIHNRCRPPS-----GILND--DSYFEEIRSFM 355
              ++ G+ +  +  +   P S      +L++  DSYF EIR+F+
Sbjct:  1038 SQHPGVLTNHLGTSASSPTSESDNHALLDEKEDSYFSEIRNFI 1080

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|D6RDW0 PRDM16 "PR domain zinc finger protein 16" [Homo sapiens (taxid:9606)]

 Score = 480 (174.0 bits), Expect = 1.7e-49, Sum P(3) = 1.7e-49
 Identities = 95/163 (58%), Positives = 120/163 (73%)

Query:   204 SQLPPLANSPKQFQE---SISNNT-GKPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPY 259
             S L PL + P  F+    ++S+    K K+RY C++CGK+FPRSANLTRHLRTHTGEQPY
Sbjct:   921 SSLQPLPHHPFNFRSPPPTLSDPILRKGKERYTCRYCGKIFPRSANLTRHLRTHTGEQPY 980

Query:   260 KCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILD 319
             +CKYC+RSFSISSNLQRHVRNIHNKEKPFKC LC+RCFGQQTNLDRHLKKHE +   +  
Sbjct:   981 RCKYCDRSFSISSNLQRHVRNIHNKEKPFKCHLCNRCFGQQTNLDRHLKKHEHENAPV-- 1038

Query:   320 DRNGGIPSPSMIHNRCRPPS-----GILND--DSYFEEIRSFM 355
              ++ G+ +  +  +   P S      +L++  DSYF EIR+F+
Sbjct:  1039 SQHPGVLTNHLGTSASSPTSESDNHALLDEKEDSYFSEIRNFI 1081

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|D3YTA5 PRDM16 "PR domain zinc finger protein 16" [Homo sapiens (taxid:9606)]

 Score = 480 (174.0 bits), Expect = 2.5e-49, Sum P(3) = 2.5e-49
 Identities = 95/163 (58%), Positives = 120/163 (73%)

Query:   204 SQLPPLANSPKQFQE---SISNNT-GKPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPY 259
             S L PL + P  F+    ++S+    K K+RY C++CGK+FPRSANLTRHLRTHTGEQPY
Sbjct:   919 SSLQPLPHHPFNFRSPPPTLSDPILRKGKERYTCRYCGKIFPRSANLTRHLRTHTGEQPY 978

Query:   260 KCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILD 319
             +CKYC+RSFSISSNLQRHVRNIHNKEKPFKC LC+RCFGQQTNLDRHLKKHE +   +  
Sbjct:   979 RCKYCDRSFSISSNLQRHVRNIHNKEKPFKCHLCNRCFGQQTNLDRHLKKHEHENAPV-- 1036

Query:   320 DRNGGIPSPSMIHNRCRPPS-----GILND--DSYFEEIRSFM 355
              ++ G+ +  +  +   P S      +L++  DSYF EIR+F+
Sbjct:  1037 SQHPGVLTNHLGTSASSPTSESDNHALLDEKEDSYFSEIRNFI 1079

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F8WEV3 PRDM16 "PR domain zinc finger protein 16" [Homo sapiens (taxid:9606)]

 Score = 480 (174.0 bits), Expect = 2.7e-49, Sum P(3) = 2.7e-49
 Identities = 95/163 (58%), Positives = 120/163 (73%)

Query:   204 SQLPPLANSPKQFQE---SISNNT-GKPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPY 259
             S L PL + P  F+    ++S+    K K+RY C++CGK+FPRSANLTRHLRTHTGEQPY
Sbjct:   919 SSLQPLPHHPFNFRSPPPTLSDPILRKGKERYTCRYCGKIFPRSANLTRHLRTHTGEQPY 978

Query:   260 KCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILD 319
             +CKYC+RSFSISSNLQRHVRNIHNKEKPFKC LC+RCFGQQTNLDRHLKKHE +   +  
Sbjct:   979 RCKYCDRSFSISSNLQRHVRNIHNKEKPFKCHLCNRCFGQQTNLDRHLKKHEHENAPV-- 1036

Query:   320 DRNGGIPSPSMIHNRCRPPS-----GILND--DSYFEEIRSFM 355
              ++ G+ +  +  +   P S      +L++  DSYF EIR+F+
Sbjct:  1037 SQHPGVLTNHLGTSASSPTSESDNHALLDEKEDSYFSEIRNFI 1079

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|Q9HAZ2 PRDM16 "PR domain zinc finger protein 16" [Homo sapiens (taxid:9606)]

 Score = 480 (174.0 bits), Expect = 2.7e-49, Sum P(3) = 2.7e-49
 Identities = 95/163 (58%), Positives = 120/163 (73%)

Query:   204 SQLPPLANSPKQFQE---SISNNT-GKPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPY 259
             S L PL + P  F+    ++S+    K K+RY C++CGK+FPRSANLTRHLRTHTGEQPY
Sbjct:   920 SSLQPLPHHPFNFRSPPPTLSDPILRKGKERYTCRYCGKIFPRSANLTRHLRTHTGEQPY 979

Query:   260 KCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILD 319
             +CKYC+RSFSISSNLQRHVRNIHNKEKPFKC LC+RCFGQQTNLDRHLKKHE +   +  
Sbjct:   980 RCKYCDRSFSISSNLQRHVRNIHNKEKPFKCHLCNRCFGQQTNLDRHLKKHEHENAPV-- 1037

Query:   320 DRNGGIPSPSMIHNRCRPPS-----GILND--DSYFEEIRSFM 355
              ++ G+ +  +  +   P S      +L++  DSYF EIR+F+
Sbjct:  1038 SQHPGVLTNHLGTSASSPTSESDNHALLDEKEDSYFSEIRNFI 1080

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0022008 "neurogenesis" evidence=IEA

GO:0035019 "somatic stem cell maintenance" evidence=IEA

GO:0043586 "tongue development" evidence=IEA

GO:0046332 "SMAD binding" evidence=IEA

GO:0050872 "white fat cell differentiation" evidence=IEA

GO:0060021 "palate development" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0043565 "sequence-specific DNA binding" evidence=IDA

GO:0030853 "negative regulation of granulocyte differentiation" evidence=IDA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=ISS;IDA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=ISS;IDA

GO:0005634 "nucleus" evidence=IDA

GO:0030512 "negative regulation of transforming growth factor beta receptor signaling pathway" evidence=IDA;IMP

GO:0017053 "transcriptional repressor complex" evidence=ISS

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IDA

GO:0043457 "regulation of cellular respiration" evidence=ISS

GO:0050873 "brown fat cell differentiation" evidence=ISS

GO:0003713 "transcription coactivator activity" evidence=ISS

UNIPROTKB|J9P0I6 PRDM16 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 477 (173.0 bits), Expect = 3.9e-49, Sum P(3) = 3.9e-49
 Identities = 94/163 (57%), Positives = 120/163 (73%)

Query:   204 SQLPPLANSPKQFQE---SISNNT-GKPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPY 259
             S L PL + P  F+    ++S+    K K+RY C++CGK+FPRSANLTRHLRTHTGEQPY
Sbjct:   899 SSLQPLPHHPFNFRSPPPTLSDPILRKGKERYTCRYCGKIFPRSANLTRHLRTHTGEQPY 958

Query:   260 KCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILD 319
             +CKYC+RSFSISSNLQRHVRNIHNKEKPF+C LC+RCFGQQTNLDRHLKKHE +   +  
Sbjct:   959 RCKYCDRSFSISSNLQRHVRNIHNKEKPFRCHLCNRCFGQQTNLDRHLKKHEHEHAPV-- 1016

Query:   320 DRNGGIPSPSMIHNRCRPPS-----GILND--DSYFEEIRSFM 355
              ++ G+ +  +  +   P S      +L++  DSYF EIR+F+
Sbjct:  1017 SQHSGVLTNHLGTSASSPTSESDNHALLDEKEDSYFSEIRNFI 1059

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|F1Q029 PRDM16 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 477 (173.0 bits), Expect = 6.7e-49, Sum P(3) = 6.7e-49
 Identities = 94/163 (57%), Positives = 120/163 (73%)

Query:   204 SQLPPLANSPKQFQE---SISNNT-GKPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPY 259
             S L PL + P  F+    ++S+    K K+RY C++CGK+FPRSANLTRHLRTHTGEQPY
Sbjct:   903 SSLQPLPHHPFNFRSPPPTLSDPILRKGKERYTCRYCGKIFPRSANLTRHLRTHTGEQPY 962

Query:   260 KCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILD 319
             +CKYC+RSFSISSNLQRHVRNIHNKEKPF+C LC+RCFGQQTNLDRHLKKHE +   +  
Sbjct:   963 RCKYCDRSFSISSNLQRHVRNIHNKEKPFRCHLCNRCFGQQTNLDRHLKKHEHEHAPV-- 1020

Query:   320 DRNGGIPSPSMIHNRCRPPS-----GILND--DSYFEEIRSFM 355
              ++ G+ +  +  +   P S      +L++  DSYF EIR+F+
Sbjct:  1021 SQHSGVLTNHLGTSASSPTSESDNHALLDEKEDSYFSEIRNFI 1063

GO:0060021 "palate development" evidence=IEA

GO:0050873 "brown fat cell differentiation" evidence=IEA

GO:0050872 "white fat cell differentiation" evidence=IEA

GO:0046332 "SMAD binding" evidence=IEA

GO:0043586 "tongue development" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0043457 "regulation of cellular respiration" evidence=IEA

GO:0035019 "somatic stem cell maintenance" evidence=IEA

GO:0030853 "negative regulation of granulocyte differentiation" evidence=IEA

GO:0030512 "negative regulation of transforming growth factor beta receptor signaling pathway" evidence=IEA

GO:0022008 "neurogenesis" evidence=IEA

GO:0017053 "transcriptional repressor complex" evidence=IEA

GO:0003713 "transcription coactivator activity" evidence=IEA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|H0YA13 PRDM16 "PR domain zinc finger protein 16" [Homo sapiens (taxid:9606)]

 Score = 480 (174.0 bits), Expect = 8.7e-49, Sum P(2) = 8.7e-49
 Identities = 95/163 (58%), Positives = 120/163 (73%)

Query:   204 SQLPPLANSPKQFQE---SISNNT-GKPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPY 259
             S L PL + P  F+    ++S+    K K+RY C++CGK+FPRSANLTRHLRTHTGEQPY
Sbjct:   728 SSLQPLPHHPFNFRSPPPTLSDPILRKGKERYTCRYCGKIFPRSANLTRHLRTHTGEQPY 787

Query:   260 KCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILD 319
             +CKYC+RSFSISSNLQRHVRNIHNKEKPFKC LC+RCFGQQTNLDRHLKKHE +   +  
Sbjct:   788 RCKYCDRSFSISSNLQRHVRNIHNKEKPFKCHLCNRCFGQQTNLDRHLKKHEHENAPV-- 845

Query:   320 DRNGGIPSPSMIHNRCRPPS-----GILND--DSYFEEIRSFM 355
              ++ G+ +  +  +   P S      +L++  DSYF EIR+F+
Sbjct:   846 SQHPGVLTNHLGTSASSPTSESDNHALLDEKEDSYFSEIRNFI 888

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1P809 MECOM "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 518 (187.4 bits), Expect = 1.2e-48, P = 1.2e-48
 Identities = 110/224 (49%), Positives = 134/224 (59%)

Query:   145 PHPVMLEAMYRAR-----DKVPRLPLPYSMNSPPGYPGRPAYPFINSGL--LNGHPIQSP 197
             P P  ++ +YR       D +  L   Y +   PG+   P    I +    L       P
Sbjct:   696 PTPFFMDPIYRVEKRKLTDPLEALKEKY-LRPSPGFLFHPQMSAIENMAEKLESFSALKP 754

Query:   198 TIDLIRSQLPPLANSPKQFQESISNNTGKPKDRYACKFCGKVFPRSANLTRHLRTHTGEQ 257
                 +   +P + N          N   K K+RY C++CGK+FPRSANLTRHLRTHTGEQ
Sbjct:   755 EASELLQSVPSMFNFRAPPNALPENLLRKGKERYTCRYCGKIFPRSANLTRHLRTHTGEQ 814

Query:   258 PYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTI 317
             PY+CKYC+RSFSISSNLQRHVRNIHNKEKPFKC LCDRCFGQQTNLDRHLKKHE +G   
Sbjct:   815 PYRCKYCDRSFSISSNLQRHVRNIHNKEKPFKCHLCDRCFGQQTNLDRHLKKHE-NGNMS 873

Query:   318 LDDRNGGIPS---PSMIHNRCRPPSGILND--DSYFEEIRSFMG 356
              +   G +PS    S  H+       IL+D  D+YF EIR+F+G
Sbjct:   874 ANQNKGSLPSGTATSSPHSELESTGAILDDKEDAYFTEIRNFIG 917

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	447
pfam13465	26	pfam13465, zf-H2C2_2, Zinc-finger double domain	4e-07
pfam00096	22	pfam00096, zf-C2H2, Zinc finger, C2H2 type	6e-05
pfam13465	26	pfam13465, zf-H2C2_2, Zinc-finger double domain	7e-05
smart00355	23	smart00355, ZnF_C2H2, zinc finger	2e-04
pfam00096	22	pfam00096, zf-C2H2, Zinc finger, C2H2 type	0.002
smart00355	23	smart00355, ZnF_C2H2, zinc finger	0.002
pfam13894	24	pfam13894, zf-C2H2_4, C2H2-type zinc finger	0.002
pfam13894	24	pfam13894, zf-C2H2_4, C2H2-type zinc finger	0.003

>gnl|CDD|222150 pfam13465, zf-H2C2_2, Zinc-finger double domain

 Score = 45.5 bits (108), Expect = 4e-07
 Identities = 18/25 (72%), Positives = 21/25 (84%)

Query: 245 NLTRHLRTHTGEQPYKCKYCERSFS 269
           NL RH+RTHTGE+PYKC  C +SFS
Sbjct: 1   NLRRHMRTHTGEKPYKCPVCGKSFS 25

Length = 26

>gnl|CDD|200998 pfam00096, zf-C2H2, Zinc finger, C2H2 type

 Score = 39.6 bits (93), Expect = 6e-05
 Identities = 14/21 (66%), Positives = 15/21 (71%)

Query: 233 CKFCGKVFPRSANLTRHLRTH 253
           C  CGK F R +NL RHLRTH
Sbjct: 2   CPDCGKSFSRKSNLKRHLRTH 22

The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter. Length = 22

>gnl|CDD|222150 pfam13465, zf-H2C2_2, Zinc-finger double domain

 Score = 39.3 bits (92), Expect = 7e-05
 Identities = 14/25 (56%), Positives = 19/25 (76%), Gaps = 1/25 (4%)

Query: 273 NLQRHVRNIHNKEKPFKCPLCDRCF 297
           NL+RH+R  H  EKP+KCP+C + F
Sbjct: 1   NLRRHMR-THTGEKPYKCPVCGKSF 24

Length = 26

>gnl|CDD|197676 smart00355, ZnF_C2H2, zinc finger

 Score = 38.2 bits (89), Expect = 2e-04
 Identities = 12/23 (52%), Positives = 14/23 (60%)

Query: 231 YACKFCGKVFPRSANLTRHLRTH 253
           Y C  CGKVF   + L  H+RTH
Sbjct: 1   YRCPECGKVFKSKSALREHMRTH 23

Length = 23

>gnl|CDD|200998 pfam00096, zf-C2H2, Zinc finger, C2H2 type

 Score = 35.4 bits (82), Expect = 0.002
 Identities = 11/22 (50%), Positives = 16/22 (72%)

Query: 289 KCPLCDRCFGQQTNLDRHLKKH 310
           KCP C + F +++NL RHL+ H
Sbjct: 1   KCPDCGKSFSRKSNLKRHLRTH 22

The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter. Length = 22

>gnl|CDD|197676 smart00355, ZnF_C2H2, zinc finger

 Score = 35.1 bits (81), Expect = 0.002
 Identities = 7/23 (30%), Positives = 14/23 (60%)

Query: 288 FKCPLCDRCFGQQTNLDRHLKKH 310
           ++CP C + F  ++ L  H++ H
Sbjct: 1   YRCPECGKVFKSKSALREHMRTH 23

Length = 23

>gnl|CDD|206065 pfam13894, zf-C2H2_4, C2H2-type zinc finger

 Score = 35.3 bits (81), Expect = 0.002
 Identities = 11/23 (47%), Positives = 12/23 (52%)

Query: 231 YACKFCGKVFPRSANLTRHLRTH 253
           + C  CGK F     L RHLR H
Sbjct: 1   FKCPLCGKSFSSKDALKRHLRKH 23

This family contains a number of divergent C2H2 type zinc fingers. Length = 24

>gnl|CDD|206065 pfam13894, zf-C2H2_4, C2H2-type zinc finger

 Score = 34.5 bits (79), Expect = 0.003
 Identities = 13/23 (56%), Positives = 16/23 (69%)

Query: 288 FKCPLCDRCFGQQTNLDRHLKKH 310
           FKCPLC + F  +  L RHL+KH
Sbjct: 1   FKCPLCGKSFSSKDALKRHLRKH 23

This family contains a number of divergent C2H2 type zinc fingers. Length = 24

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	447
KOG2462|consensus	279		99.89
KOG2462|consensus	279		99.87
KOG1074|consensus	958		99.75
KOG3576|consensus	267		99.73
KOG1074|consensus	958		99.61
KOG3608|consensus	467		99.55
KOG3623|consensus	1007		99.51
KOG3623|consensus	1007		99.5
KOG3576|consensus	267		99.49
KOG3608|consensus	467		99.44
PLN03086	567	PRLI-interacting factor K; Provisional	99.01
PLN03086	567	PRLI-interacting factor K; Provisional	98.96
PHA00733	128	hypothetical protein	98.89
PHA00733	128	hypothetical protein	98.78
KOG3993|consensus	500		98.69
PHA02768	55	hypothetical protein; Provisional	98.6
PHA02768	55	hypothetical protein; Provisional	98.47
KOG3993|consensus	500		98.28
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.27
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	97.97
PHA00616	44	hypothetical protein	97.96
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.83
PHA00616	44	hypothetical protein	97.83
PHA00732	79	hypothetical protein	97.79
PHA00732	79	hypothetical protein	97.78
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.56
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.48
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.28
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.21
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.13
COG5236	493	Uncharacterized conserved protein, contains RING Z	97.11
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.05
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	96.85
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	96.76
KOG2231|consensus	669		96.69
COG5048	467	FOG: Zn-finger [General function prediction only]	96.62
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.5
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	96.37
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	96.37
KOG2231|consensus	669		96.29
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	96.23
smart00355	26	ZnF_C2H2 zinc finger.	95.72
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	95.63
PRK04860	160	hypothetical protein; Provisional	95.6
smart00355	26	ZnF_C2H2 zinc finger.	95.46
KOG2482|consensus	423		95.13
KOG1146|consensus	1406		95.03
PRK04860	160	hypothetical protein; Provisional	94.99
COG5236	493	Uncharacterized conserved protein, contains RING Z	94.91
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	94.42
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	94.29
KOG2785|consensus	390		94.04
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	93.95
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	93.75
KOG1146|consensus	1406		93.43
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	92.94
COG5048	467	FOG: Zn-finger [General function prediction only]	92.64
KOG2482|consensus	423		92.31
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	91.82
KOG4173|consensus	253		91.36
KOG2893|consensus	341		90.45
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	89.44
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	89.14
KOG4167|consensus	907		89.03
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	88.35
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	87.93
KOG4173|consensus	253		87.92
KOG2893|consensus	341		86.14
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	84.96
KOG4377|consensus	480		83.78
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	83.33
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	82.54
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	82.17
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	80.91

>KOG2462|consensus

Probab=99.89  E-value=3e-24  Score=204.47  Aligned_cols=138  Identities=26%  Similarity=0.499  Sum_probs=125.0

Q ss_pred             CCCccCCCCCCccCChHHHHHHHHHhcC---CCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCCCcccCCchhHH
Q psy5888         228 KDRYACKFCGKVFPRSANLTRHLRTHTG---EQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLD  304 (447)
Q Consensus       228 ~k~~~C~~Cgk~F~~~~~L~~H~r~H~~---ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C~k~F~~~~~L~  304 (447)
                      ..+|+|..||+.|.+..+|.+|..+|..   .+-+.|++|+|.|.+-..|+.|++ +|+  -+++|.+||+.|.+...|+
T Consensus       128 ~~r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHir-TH~--l~c~C~iCGKaFSRPWLLQ  204 (279)
T KOG2462|consen  128 HPRYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIR-THT--LPCECGICGKAFSRPWLLQ  204 (279)
T ss_pred             CCceeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhh-ccC--CCcccccccccccchHHhh
Confidence            4579999999999999999999999975   567999999999999999999999 787  4799999999999999999


Q ss_pred             HHHhhhcCCCCcccCCCCCCCCChhhhhhccCCCCCCCCCCCchhhhccccccccCChhHHHHHHHhhcc
Q psy5888         305 RHLKKHEADGPTILDDRNGGIPSPSMIHNRCRPPSGILNDDSYFEEIRSFMGKVSADGNRLVQRVSSLSR  374 (447)
Q Consensus       305 ~Hlr~H~~ekp~~C~~C~k~f~s~~~l~~H~~~h~~~~~~~~~~~~~c~~Cgk~f~~~~~L~~H~~~~~~  374 (447)
                      .|+|+|+|||||.|..|++.|...++|+-|++.|..+    +.|  .|..|+|.|..++.|.+|.+.-..
T Consensus       205 GHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~----K~~--qC~~C~KsFsl~SyLnKH~ES~C~  268 (279)
T KOG2462|consen  205 GHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDV----KKH--QCPRCGKSFALKSYLNKHSESACL  268 (279)
T ss_pred             cccccccCCCCccCCcccchhcchHHHHHHHHhhcCC----ccc--cCcchhhHHHHHHHHHHhhhhccc
Confidence            9999999999999999999999999999999999853    333  569999999999999999775443

>KOG2462|consensus

Probab=99.87  E-value=6.3e-23  Score=195.44  Aligned_cols=134  Identities=27%  Similarity=0.537  Sum_probs=113.2

Q ss_pred             hhhccCCCCCCCchhhhhcccccCCC-CCCCccCCCCCCccCChHHHHHHHHHhcCCCcccCCCCCCcccchhhHHHHhh
Q psy5888         201 LIRSQLPPLANSPKQFQESISNNTGK-PKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVR  279 (447)
Q Consensus       201 ~~~~~~p~~~~s~~~~~~~~~~~~~~-~~k~~~C~~Cgk~F~~~~~L~~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~  279 (447)
                      ..|..|.........+..|...+... .++-+.|++|+|.|.+...|++|+|+|+  -+++|.+|||.|.+.+-|+-|+|
T Consensus       131 ~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWLLQGHiR  208 (279)
T KOG2462|consen  131 YKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWLLQGHIR  208 (279)
T ss_pred             eeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccC--CCcccccccccccchHHhhcccc
Confidence            44555655544443333332222211 1467999999999999999999999997  67999999999999999999999


Q ss_pred             hhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCCCCCCCChhhhhhccCC
Q psy5888         280 NIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDRNGGIPSPSMIHNRCRP  337 (447)
Q Consensus       280 ~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C~k~f~s~~~l~~H~~~  337 (447)
                       .|+|||||.|+.|+|.|.++++|+.||++|.+.|.|.|..|+|.|...+.|..|...
T Consensus       209 -THTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  209 -THTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHSES  265 (279)
T ss_pred             -cccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhhhh
Confidence             899999999999999999999999999999999999999999999999999999754

>KOG1074|consensus

Probab=99.75  E-value=6.4e-18  Score=179.85  Aligned_cols=84  Identities=13%  Similarity=0.150  Sum_probs=75.7

Q ss_pred             CCCCCCCcccCCchhHHHHHhhhcCCCCcccCCCCCCCCChhhhhhccCCCCCCCCCCCchhhhcc---ccccccCChhH
Q psy5888         288 FKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDRNGGIPSPSMIHNRCRPPSGILNDDSYFEEIRS---FMGKVSADGNR  364 (447)
Q Consensus       288 ~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C~k~f~s~~~l~~H~~~h~~~~~~~~~~~~~c~---~Cgk~f~~~~~  364 (447)
                      -.|-+|-|...-.+.|+.|.|+|+||+||+|.+|++.|.++..|+.|+-.|.....-...|.|  .   +|-+.|...-.
T Consensus       606 NqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~Sc--P~~~ic~~kftn~V~  683 (958)
T KOG1074|consen  606 NQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSC--PSTFICQKKFTNAVT  683 (958)
T ss_pred             cceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccccccccC--Cchhhhccccccccc
Confidence            579999999999999999999999999999999999999999999999999877665555544  7   99999999999


Q ss_pred             HHHHHHhhc
Q psy5888         365 LVQRVSSLS  373 (447)
Q Consensus       365 L~~H~~~~~  373 (447)
                      |-+|++.|.
T Consensus       684 lpQhIriH~  692 (958)
T KOG1074|consen  684 LPQHIRIHL  692 (958)
T ss_pred             ccceEEeec
Confidence            999987655

>KOG3576|consensus

Probab=99.73  E-value=2.5e-18  Score=156.73  Aligned_cols=112  Identities=29%  Similarity=0.617  Sum_probs=102.2

Q ss_pred             CCCccCCCCCCccCChHHHHHHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCCCcccCCchhHHHHH
Q psy5888         228 KDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHL  307 (447)
Q Consensus       228 ~k~~~C~~Cgk~F~~~~~L~~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hl  307 (447)
                      ...|.|.+|+|.|.-...|.+|++.|...+.|.|..||+.|....+|++|++ .|+|.+||+|..|++.|..+..|..|+
T Consensus       115 ~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~r-thtgvrpykc~~c~kaftqrcsleshl  193 (267)
T KOG3576|consen  115 QDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTR-THTGVRPYKCSLCEKAFTQRCSLESHL  193 (267)
T ss_pred             CCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhc-cccCccccchhhhhHHHHhhccHHHHH
Confidence            4679999999999999999999999999999999999999999999999999 899999999999999999999999998


Q ss_pred             hhhcC-----------CCCcccCCCCCCCCChhhhhhccCCCCC
Q psy5888         308 KKHEA-----------DGPTILDDRNGGIPSPSMIHNRCRPPSG  340 (447)
Q Consensus       308 r~H~~-----------ekp~~C~~C~k~f~s~~~l~~H~~~h~~  340 (447)
                      +.-++           +|.|+|+.||++-.....+..|++.|+.
T Consensus       194 ~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp  237 (267)
T KOG3576|consen  194 KKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHP  237 (267)
T ss_pred             HHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCC
Confidence            76544           4668899999888887788888887774

>KOG1074|consensus

Probab=99.61  E-value=1.3e-15  Score=162.52  Aligned_cols=113  Identities=27%  Similarity=0.405  Sum_probs=97.0

Q ss_pred             ccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCC----CcccC---CCCCCCCChhhh
Q psy5888         259 YKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADG----PTILD---DRNGGIPSPSMI  331 (447)
Q Consensus       259 ~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ek----p~~C~---~C~k~f~s~~~l  331 (447)
                      -.|.+|.|...-.+.|+.|++ .|+||+||+|.+||+.|..+.+|+.|+-+|...-    .|.|+   +|-+.|.....|
T Consensus       606 NqCiiC~rVlSC~saLqmHyr-tHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~V~l  684 (958)
T KOG1074|consen  606 NQCIICLRVLSCPSALQMHYR-THTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNAVTL  684 (958)
T ss_pred             cceeeeeecccchhhhhhhhh-cccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhcccccccccc
Confidence            668888888888888888998 7999999999999999999999999999997653    47899   999999999999


Q ss_pred             hhccCCCCC-CCC------CCCchhhhccccccccCChhHHHHHHHhh
Q psy5888         332 HNRCRPPSG-ILN------DDSYFEEIRSFMGKVSADGNRLVQRVSSL  372 (447)
Q Consensus       332 ~~H~~~h~~-~~~------~~~~~~~~c~~Cgk~f~~~~~L~~H~~~~  372 (447)
                      .+|+++|.. .+.      +.......|.+|.+.|.+...|..|+..+
T Consensus       685 pQhIriH~~~~~s~g~~a~e~~~~adq~~~~qk~~~~a~~f~~~~se~  732 (958)
T KOG1074|consen  685 PQHIRIHLGGQISNGGTAAEGILAADQCSSCQKTFSDARSFSQQISEQ  732 (958)
T ss_pred             cceEEeecCCCCCCCcccccccchhcccchhhhcccccccchhhhhcc
Confidence            999999872 222      33445567899999999999999998765

>KOG3608|consensus

Probab=99.55  E-value=1.1e-15  Score=149.43  Aligned_cols=160  Identities=20%  Similarity=0.336  Sum_probs=117.9

Q ss_pred             CCCCCchhhhhcccccCCCCCCCccCCCCCCccCChHHHHHHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCC
Q psy5888         208 PLANSPKQFQESISNNTGKPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKP  287 (447)
Q Consensus       208 ~~~~s~~~~~~~~~~~~~~~~k~~~C~~Cgk~F~~~~~L~~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp  287 (447)
                      ..+.....+-.++...+...+..|.|..|.|.|.++..|..|++.|.  .-|+|+.|.-.....+.|.+|++..|...|+
T Consensus       215 ~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHv--n~ykCplCdmtc~~~ssL~~H~r~rHs~dkp  292 (467)
T KOG3608|consen  215 ELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHV--NCYKCPLCDMTCSSASSLTTHIRYRHSKDKP  292 (467)
T ss_pred             HHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhh--hcccccccccCCCChHHHHHHHHhhhccCCC
Confidence            33334444444444444445556777777777777777777777775  3478888888888888888888888888888


Q ss_pred             CCCCCCCcccCCchhHHHHHhhhcCCCCcccCC--CCCCCCChhhhhhccCCCCCCCCCCCchhhhccccccccCChhHH
Q psy5888         288 FKCPLCDRCFGQQTNLDRHLKKHEADGPTILDD--RNGGIPSPSMIHNRCRPPSGILNDDSYFEEIRSFMGKVSADGNRL  365 (447)
Q Consensus       288 ~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~--C~k~f~s~~~l~~H~~~h~~~~~~~~~~~~~c~~Cgk~f~~~~~L  365 (447)
                      |+|..|.+.|.+..+|.+|...|. +-.|.|+.  |.+.|.....+..|.+.++...   ....+.|-.|.+.|++...|
T Consensus       293 fKCd~Cd~~c~~esdL~kH~~~HS-~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~---np~~Y~CH~Cdr~ft~G~~L  368 (467)
T KOG3608|consen  293 FKCDECDTRCVRESDLAKHVQVHS-KTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGN---NPILYACHCCDRFFTSGKSL  368 (467)
T ss_pred             ccccchhhhhccHHHHHHHHHhcc-ccceecCCCCCcHHHHHHHHHHHHHHHhccCC---CCCceeeecchhhhccchhH
Confidence            888888888888888888888776 67788886  8888888888888877766422   22233668999999999999


Q ss_pred             HHHHHhhc
Q psy5888         366 VQRVSSLS  373 (447)
Q Consensus       366 ~~H~~~~~  373 (447)
                      ..|+..-+
T Consensus       369 ~~HL~kkH  376 (467)
T KOG3608|consen  369 SAHLMKKH  376 (467)
T ss_pred             HHHHHHhh
Confidence            99986533

>KOG3623|consensus

Probab=99.51  E-value=4.7e-15  Score=155.84  Aligned_cols=108  Identities=21%  Similarity=0.556  Sum_probs=96.5

Q ss_pred             ccCCCCCCccCChHHHHHHHHHhc--CCCcccCCCCCCcccchhhHHHHhhhhccC-------------CCCCCCCCCCc
Q psy5888         231 YACKFCGKVFPRSANLTRHLRTHT--GEQPYKCKYCERSFSISSNLQRHVRNIHNK-------------EKPFKCPLCDR  295 (447)
Q Consensus       231 ~~C~~Cgk~F~~~~~L~~H~r~H~--~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~-------------~kp~~C~~C~k  295 (447)
                      ..|++|.+.+.+...|+.|++..+  .+..|.|..|...|.++..|.+||. +|..             .+.|+|..||+
T Consensus       211 ltcpycdrgykrltslkeHikyrhekne~nfsC~lCsytFAyRtQLErhm~-~hkpg~dqa~sltqsa~lRKFKCtECgK  289 (1007)
T KOG3623|consen  211 LTCPYCDRGYKRLTSLKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHMQ-LHKPGGDQAISLTQSALLRKFKCTECGK  289 (1007)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHHH-hhcCCCcccccccchhhhccccccccch
Confidence            679999999999999999998543  2566999999999999999999998 6752             35699999999


Q ss_pred             ccCCchhHHHHHhhhcCCCCcccCCCCCCCCChhhhhhccCCCC
Q psy5888         296 CFGQQTNLDRHLKKHEADGPTILDDRNGGIPSPSMIHNRCRPPS  339 (447)
Q Consensus       296 ~F~~~~~L~~Hlr~H~~ekp~~C~~C~k~f~s~~~l~~H~~~h~  339 (447)
                      .|..+.+|+.|+|+|.|||||.|+.|+|.|.....+-.|+...-
T Consensus       290 AFKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHmSSKK  333 (1007)
T KOG3623|consen  290 AFKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHMSSKK  333 (1007)
T ss_pred             hhhhHHHHHhhheeecCCCCcCCcccccccccCCcccccccccc
Confidence            99999999999999999999999999999998888888875443

>KOG3623|consensus

Probab=99.50  E-value=4.8e-14  Score=148.30  Aligned_cols=81  Identities=22%  Similarity=0.531  Sum_probs=72.4

Q ss_pred             CCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCCCCCCCChhhhhhcc
Q psy5888         256 EQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDRNGGIPSPSMIHNRC  335 (447)
Q Consensus       256 ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C~k~f~s~~~l~~H~  335 (447)
                      +..|.|+.|+|.|.-.+.|.+|.- -|+|.+||+|.+|.+.|..+.+|..|+|.|.|||||.|++|+|.|.....+-+|+
T Consensus       892 ~gmyaCDqCDK~FqKqSSLaRHKY-EHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCdKClKRFSHSGSYSQHM  970 (1007)
T KOG3623|consen  892 DGMYACDQCDKAFQKQSSLARHKY-EHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCDKCLKRFSHSGSYSQHM  970 (1007)
T ss_pred             cccchHHHHHHHHHhhHHHHHhhh-hhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCcchhhhhhhhcccccchHhhh
Confidence            457999999999999999999987 7999999999999999999999999999999999999999999999888888887


Q ss_pred             CC
Q psy5888         336 RP  337 (447)
Q Consensus       336 ~~  337 (447)
                      ..
T Consensus       971 NH  972 (1007)
T KOG3623|consen  971 NH  972 (1007)
T ss_pred             cc
Confidence            54

>KOG3576|consensus

Probab=99.49  E-value=2e-15  Score=137.84  Aligned_cols=118  Identities=16%  Similarity=0.326  Sum_probs=102.6

Q ss_pred             CCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCCCCCCCChhhhhhc
Q psy5888         255 GEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDRNGGIPSPSMIHNR  334 (447)
Q Consensus       255 ~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C~k~f~s~~~l~~H  334 (447)
                      +...|.|.+|+|.|....-|.+|++ .|...+.|-|..||+.|...-+|++|+|+|+|.+||+|..|++.|...-.|..|
T Consensus       114 d~d~ftCrvCgK~F~lQRmlnrh~k-ch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcslesh  192 (267)
T KOG3576|consen  114 DQDSFTCRVCGKKFGLQRMLNRHLK-CHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESH  192 (267)
T ss_pred             CCCeeeeehhhhhhhHHHHHHHHhh-hccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHH
Confidence            3456999999999999999999999 899999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCC-----CCCCchhhhccccccccCChhHHHHHHHhhc
Q psy5888         335 CRPPSGIL-----NDDSYFEEIRSFMGKVSADGNRLVQRVSSLS  373 (447)
Q Consensus       335 ~~~h~~~~-----~~~~~~~~~c~~Cgk~f~~~~~L~~H~~~~~  373 (447)
                      ++.-|+..     .+....-.+|+.||.+....+.++.|++.++
T Consensus       193 l~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~h  236 (267)
T KOG3576|consen  193 LKKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHH  236 (267)
T ss_pred             HHHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcC
Confidence            87655532     2222333477999999999999999987544

>KOG3608|consensus

Probab=99.44  E-value=3.9e-14  Score=138.68  Aligned_cols=136  Identities=22%  Similarity=0.394  Sum_probs=100.0

Q ss_pred             ccCCC--CCCccCChHHHHHHHHHhcCCCcccCCCCCCcccchhhHHHHhhh----------------------------
Q psy5888         231 YACKF--CGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRN----------------------------  280 (447)
Q Consensus       231 ~~C~~--Cgk~F~~~~~L~~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~----------------------------  280 (447)
                      +.|.+  |-+.|.++..|.+|+++|+++|-..|+.|+.-|.++..|..|.+.                            
T Consensus       178 ~~C~W~~Ct~~~~~k~~LreH~r~Hs~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv  257 (467)
T KOG3608|consen  178 TMCNWAMCTKHMGNKYRLREHIRTHSNEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHV  257 (467)
T ss_pred             eeccchhhhhhhccHHHHHHHHHhcCCCeEEecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHH
Confidence            55555  667777777777777777766655555555555555555555441                            


Q ss_pred             -hccCCCCCCCCCCCcccCCchhHHHHHhh-hcCCCCcccCCCCCCCCChhhhhhccCCCCCCCCCCCchhhhccccccc
Q psy5888         281 -IHNKEKPFKCPLCDRCFGQQTNLDRHLKK-HEADGPTILDDRNGGIPSPSMIHNRCRPPSGILNDDSYFEEIRSFMGKV  358 (447)
Q Consensus       281 -~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~-H~~ekp~~C~~C~k~f~s~~~l~~H~~~h~~~~~~~~~~~~~c~~Cgk~  358 (447)
                       .|..  -|+|+.|.......+.|.+|++. |..+|+|+|+.|.+.|.+...|..|...|..     ..+.|.-..|...
T Consensus       258 ~rHvn--~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS~-----~~y~C~h~~C~~s  330 (467)
T KOG3608|consen  258 VRHVN--CYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHSK-----TVYQCEHPDCHYS  330 (467)
T ss_pred             HHhhh--cccccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhccc-----cceecCCCCCcHH
Confidence             2322  48899999989999999999876 8888999999999999999999999887763     3555544569999


Q ss_pred             cCChhHHHHHHHhhc
Q psy5888         359 SADGNRLVQRVSSLS  373 (447)
Q Consensus       359 f~~~~~L~~H~~~~~  373 (447)
                      |.....+.+|++.++
T Consensus       331 ~r~~~q~~~H~~evh  345 (467)
T KOG3608|consen  331 VRTYTQMRRHFLEVH  345 (467)
T ss_pred             HHHHHHHHHHHHHhc
Confidence            999999999998655

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.01  E-value=4.5e-10  Score=119.29  Aligned_cols=120  Identities=13%  Similarity=0.283  Sum_probs=87.9

Q ss_pred             ccCCC--CCCccCChHHHHHHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCCCcccCCchhHHHHHh
Q psy5888         231 YACKF--CGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLK  308 (447)
Q Consensus       231 ~~C~~--Cgk~F~~~~~L~~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr  308 (447)
                      -.|+.  ||..|. +..|..|         +.|++|++.|. ...|..|+. .|.  +++.|+ ||+.| .+..|..|++
T Consensus       434 V~Cp~~~Cg~v~~-r~el~~H---------~~C~~Cgk~f~-~s~LekH~~-~~H--kpv~Cp-Cg~~~-~R~~L~~H~~  497 (567)
T PLN03086        434 VVCPHDGCGIVLR-VEEAKNH---------VHCEKCGQAFQ-QGEMEKHMK-VFH--EPLQCP-CGVVL-EKEQMVQHQA  497 (567)
T ss_pred             eeCCcccccceee-ccccccC---------ccCCCCCCccc-hHHHHHHHH-hcC--CCccCC-CCCCc-chhHHHhhhh
Confidence            45774  888884 3344444         47999999985 577899988 453  689999 99755 5688999999


Q ss_pred             hhcCCCCcccCCCCCCCCC----------hhhhhhccCCCCCCCCCCCchhhhccccccccCChhHHHHHHHhhcc
Q psy5888         309 KHEADGPTILDDRNGGIPS----------PSMIHNRCRPPSGILNDDSYFEEIRSFMGKVSADGNRLVQRVSSLSR  374 (447)
Q Consensus       309 ~H~~ekp~~C~~C~k~f~s----------~~~l~~H~~~h~~~~~~~~~~~~~c~~Cgk~f~~~~~L~~H~~~~~~  374 (447)
                      +|..++++.|.+|++.|..          ...|..|...+.     ...+  .|..||+.+..+ .+..|+...+.
T Consensus       498 thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~CG-----~rt~--~C~~Cgk~Vrlr-dm~~H~~~~h~  565 (567)
T PLN03086        498 STCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESICG-----SRTA--PCDSCGRSVMLK-EMDIHQIAVHQ  565 (567)
T ss_pred             ccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHhcC-----Ccce--EccccCCeeeeh-hHHHHHHHhhc
Confidence            9999999999999998852          235677766543     2333  459999977665 78888876554

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.96  E-value=5.4e-10  Score=118.72  Aligned_cols=100  Identities=14%  Similarity=0.362  Sum_probs=64.4

Q ss_pred             CCCccCCCCCCccCChHHHHHHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCCCcccC---------
Q psy5888         228 KDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFG---------  298 (447)
Q Consensus       228 ~k~~~C~~Cgk~F~~~~~L~~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C~k~F~---------  298 (447)
                      ++.+.|++|++.|. ...|..|+++|+  +++.|+ |++.| .+..|..|+. .|...+++.|.+|++.|.         
T Consensus       451 ~~H~~C~~Cgk~f~-~s~LekH~~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~-thCp~Kpi~C~fC~~~v~~g~~~~d~~  524 (567)
T PLN03086        451 KNHVHCEKCGQAFQ-QGEMEKHMKVFH--EPLQCP-CGVVL-EKEQMVQHQA-STCPLRLITCRFCGDMVQAGGSAMDVR  524 (567)
T ss_pred             ccCccCCCCCCccc-hHHHHHHHHhcC--CCccCC-CCCCc-chhHHHhhhh-ccCCCCceeCCCCCCccccCccccchh
Confidence            34567777777774 566777777764  667777 77544 4566777766 577777777777777763         


Q ss_pred             -CchhHHHHHhhhcCCCCcccCCCCCCCCChhhhhhcc
Q psy5888         299 -QQTNLDRHLKKHEADGPTILDDRNGGIPSPSMIHNRC  335 (447)
Q Consensus       299 -~~~~L~~Hlr~H~~ekp~~C~~C~k~f~s~~~l~~H~  335 (447)
                       ....|..|...+ +.+++.|..|++.+... .+..|+
T Consensus       525 d~~s~Lt~HE~~C-G~rt~~C~~Cgk~Vrlr-dm~~H~  560 (567)
T PLN03086        525 DRLRGMSEHESIC-GSRTAPCDSCGRSVMLK-EMDIHQ  560 (567)
T ss_pred             hhhhhHHHHHHhc-CCcceEccccCCeeeeh-hHHHHH
Confidence             134667776664 66777777777776543 234443

>PHA00733 hypothetical protein

Probab=98.89  E-value=1.1e-09  Score=95.88  Aligned_cols=82  Identities=26%  Similarity=0.453  Sum_probs=64.3

Q ss_pred             CCCccCCCCCCccCChHHHHHH--HH---HhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCCCcccCCchh
Q psy5888         228 KDRYACKFCGKVFPRSANLTRH--LR---THTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTN  302 (447)
Q Consensus       228 ~k~~~C~~Cgk~F~~~~~L~~H--~r---~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C~k~F~~~~~  302 (447)
                      .+++.|.+|.+.|.....|..|  ++   .+.++++|.|..|++.|.+...|..|++ .|  +.+|.|.+|++.|.....
T Consensus        38 ~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r-~h--~~~~~C~~CgK~F~~~~s  114 (128)
T PHA00733         38 QKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIR-YT--EHSKVCPVCGKEFRNTDS  114 (128)
T ss_pred             hhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHh-cC--CcCccCCCCCCccCCHHH
Confidence            4678899999888887777665  22   2344778999999999999999988887 55  346889999999999989


Q ss_pred             HHHHHhhhcC
Q psy5888         303 LDRHLKKHEA  312 (447)
Q Consensus       303 L~~Hlr~H~~  312 (447)
                      |..|+...|+
T Consensus       115 L~~H~~~~h~  124 (128)
T PHA00733        115 TLDHVCKKHN  124 (128)
T ss_pred             HHHHHHHhcC
Confidence            9888877664

>PHA00733 hypothetical protein

Probab=98.78  E-value=3.5e-09  Score=92.84  Aligned_cols=95  Identities=12%  Similarity=0.164  Sum_probs=70.0

Q ss_pred             HHHHHHHHHhcCCCcccCCCCCCcccchhhHHHH--hh--hhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccC
Q psy5888         244 ANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRH--VR--NIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILD  319 (447)
Q Consensus       244 ~~L~~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H--~~--~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~  319 (447)
                      ..|.++-..-...+++.|.+|.+.|.....|..|  ++  ..+.+.++|.|..|++.|.....|..|++.|  +.+|.|.
T Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~  103 (128)
T PHA00733         26 EELKRYHSLTPEQKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCP  103 (128)
T ss_pred             HHhhhhhcCChhhhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCC
Confidence            3444433222235779999999888877666655  11  1233578899999999999999999999876  3568999


Q ss_pred             CCCCCCCChhhhhhccCCCCC
Q psy5888         320 DRNGGIPSPSMIHNRCRPPSG  340 (447)
Q Consensus       320 ~C~k~f~s~~~l~~H~~~h~~  340 (447)
                      .|++.|.....|..|+...|+
T Consensus       104 ~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733        104 VCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             CCCCccCCHHHHHHHHHHhcC
Confidence            999999998888888776664

>KOG3993|consensus

Probab=98.69  E-value=3.3e-09  Score=106.63  Aligned_cols=52  Identities=8%  Similarity=-0.030  Sum_probs=35.0

Q ss_pred             cccCCCCCCCCChhhhhhccCCCCCCCCCCCchhhhccccccccCChhHHHHHHHhhc
Q psy5888         316 TILDDRNGGIPSPSMIHNRCRPPSGILNDDSYFEEIRSFMGKVSADGNRLVQRVSSLS  373 (447)
Q Consensus       316 ~~C~~C~k~f~s~~~l~~H~~~h~~~~~~~~~~~~~c~~Cgk~f~~~~~L~~H~~~~~  373 (447)
                      ..|+.|+--+.++..-..+.+...    ....|.|  ..|--.|.....|.+|+...+
T Consensus       431 ~~pp~~~~ppsss~~sgg~~rlg~----~~q~f~~--ky~~atfyss~~ltrhin~~H  482 (500)
T KOG3993|consen  431 ELPPYDGSPPSSSGSSGGYGRLGI----AEQGFTC--KYCPATFYSSPGLTRHINKCH  482 (500)
T ss_pred             cCCCCCCCCcccCCCCCccccccc----hhhcccc--ccchHhhhcCcchHhHhhhcC
Confidence            347778866766555444543322    2345555  699999999999999987544

>PHA02768 hypothetical protein; Provisional

Probab=98.60  E-value=2.4e-08  Score=73.71  Aligned_cols=42  Identities=26%  Similarity=0.647  Sum_probs=27.8

Q ss_pred             ccCCCCCCccCChHHHHHHHHHhcCCCcccCCCCCCcccchhhH
Q psy5888         231 YACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNL  274 (447)
Q Consensus       231 ~~C~~Cgk~F~~~~~L~~H~r~H~~ekp~~C~~C~k~F~s~~~L  274 (447)
                      |.|+.||+.|.+..+|..|+++|+  ++|+|..|++.|.+.+.|
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEY   47 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceeccccee
Confidence            566667777777667777776666  466666666666655544

>PHA02768 hypothetical protein; Provisional

Probab=98.47  E-value=7e-08  Score=71.25  Aligned_cols=42  Identities=19%  Similarity=0.423  Sum_probs=22.7

Q ss_pred             CCCCCCCcccCCchhHHHHHhhhcCCCCcccCCCCCCCCChhhh
Q psy5888         288 FKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDRNGGIPSPSMI  331 (447)
Q Consensus       288 ~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C~k~f~s~~~l  331 (447)
                      |.|+.||+.|.+...|..|+++|+  ++|.|..|++.|...+.|
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEY   47 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceeccccee
Confidence            555555555555555555555555  455555555555544433

>KOG3993|consensus

Probab=98.28  E-value=6.8e-07  Score=90.29  Aligned_cols=115  Identities=20%  Similarity=0.322  Sum_probs=74.1

Q ss_pred             ccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCccc--CCC-CCCCCChhhhhhcc
Q psy5888         259 YKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTIL--DDR-NGGIPSPSMIHNRC  335 (447)
Q Consensus       259 ~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C--~~C-~k~f~s~~~l~~H~  335 (447)
                      |+|..|...|.....|.+|.- --....-|+|+.|+|.|+-..+|..|+|+|.....-.-  ..= .+...+....++-.
T Consensus       268 yiCqLCK~kYeD~F~LAQHrC-~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~  346 (500)
T KOG3993|consen  268 YICQLCKEKYEDAFALAQHRC-PRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAE  346 (500)
T ss_pred             HHHHHHHHhhhhHHHHhhccC-CeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhcc
Confidence            888888888888888888864 23333459999999999999999999999975432110  000 00000111111111


Q ss_pred             CCCCCCCCCCCchhhhccccccccCChhHHHHHHHhhcccCcC
Q psy5888         336 RPPSGILNDDSYFEEIRSFMGKVSADGNRLVQRVSSLSRANYN  378 (447)
Q Consensus       336 ~~h~~~~~~~~~~~~~c~~Cgk~f~~~~~L~~H~~~~~~~~~~  378 (447)
                      +  .+....+..|.|  ..|+|.|.++..|++|+.++++....
T Consensus       347 r--sg~dss~gi~~C--~~C~KkFrRqAYLrKHqlthq~~~~~  385 (500)
T KOG3993|consen  347 R--SGDDSSSGIFSC--HTCGKKFRRQAYLRKHQLTHQRAPLA  385 (500)
T ss_pred             c--cCCcccCceeec--HHhhhhhHHHHHHHHhHHhhhccccc
Confidence            1  333344445544  99999999999999998877765443

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.27  E-value=4.5e-07  Score=57.10  Aligned_cols=25  Identities=76%  Similarity=1.472  Sum_probs=17.9

Q ss_pred             HHHHHHHHhcCCCcccCCCCCCccc
Q psy5888         245 NLTRHLRTHTGEQPYKCKYCERSFS  269 (447)
Q Consensus       245 ~L~~H~r~H~~ekp~~C~~C~k~F~  269 (447)
                      +|.+|+++|+++++|.|++|++.|.
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEES
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeC
Confidence            4667777777777777777777765

...

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=97.97  E-value=3.1e-06  Score=53.26  Aligned_cols=24  Identities=54%  Similarity=1.261  Sum_probs=14.5

Q ss_pred             HHHHhhhhccCCCCCCCCCCCcccC
Q psy5888         274 LQRHVRNIHNKEKPFKCPLCDRCFG  298 (447)
Q Consensus       274 L~~H~~~~H~~~kp~~C~~C~k~F~  298 (447)
                      |.+|++ +|+++++|.|++|++.|.
T Consensus         2 l~~H~~-~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    2 LRRHMR-THTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHH-HHSSSSSEEESSSSEEES
T ss_pred             HHHHhh-hcCCCCCCCCCCCcCeeC
Confidence            556666 566666666666666554

...

>PHA00616 hypothetical protein

Probab=97.96  E-value=3.1e-06  Score=59.65  Aligned_cols=34  Identities=24%  Similarity=0.574  Sum_probs=28.6

Q ss_pred             CccCCCCCCccCChHHHHHHHHHhcCCCcccCCC
Q psy5888         230 RYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKY  263 (447)
Q Consensus       230 ~~~C~~Cgk~F~~~~~L~~H~r~H~~ekp~~C~~  263 (447)
                      +|+|..||+.|...+.|.+|++.|++++++.|++
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~   34 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLEY   34 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccceeE
Confidence            4788888888888888888888888888888875

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.83  E-value=2.3e-05  Score=58.15  Aligned_cols=49  Identities=35%  Similarity=0.729  Sum_probs=22.8

Q ss_pred             ccCCCCCCcccchhhHHHHhhhhccCC-CCCCCCCCCcccCCchhHHHHHhhh
Q psy5888         259 YKCKYCERSFSISSNLQRHVRNIHNKE-KPFKCPLCDRCFGQQTNLDRHLKKH  310 (447)
Q Consensus       259 ~~C~~C~k~F~s~~~L~~H~~~~H~~~-kp~~C~~C~k~F~~~~~L~~Hlr~H  310 (447)
                      |.|++|++. .+...|..|....|..+ +.+.|++|...+.  .+|..|+..+
T Consensus         3 f~CP~C~~~-~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~   52 (54)
T PF05605_consen    3 FTCPYCGKG-FSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQ   52 (54)
T ss_pred             cCCCCCCCc-cCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHh
Confidence            445555552 33344555544444432 2355555554333  2555555543

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PHA00616 hypothetical protein

Probab=97.83  E-value=7.1e-06  Score=57.88  Aligned_cols=33  Identities=18%  Similarity=0.411  Sum_probs=21.9

Q ss_pred             CCCCCCCCcccCCchhHHHHHhhhcCCCCcccC
Q psy5888         287 PFKCPLCDRCFGQQTNLDRHLKKHEADGPTILD  319 (447)
Q Consensus       287 p~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~  319 (447)
                      +|+|..||+.|.....|.+|++.|++++++.|+
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~   33 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLE   33 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCcccee
Confidence            466666666666666666666666666666654

>PHA00732 hypothetical protein

Probab=97.79  E-value=1.6e-05  Score=63.79  Aligned_cols=44  Identities=32%  Similarity=0.636  Sum_probs=29.5

Q ss_pred             CccCCCCCCccCChHHHHHHHHH-hcCCCcccCCCCCCcccchhhHHHHhh
Q psy5888         230 RYACKFCGKVFPRSANLTRHLRT-HTGEQPYKCKYCERSFSISSNLQRHVR  279 (447)
Q Consensus       230 ~~~C~~Cgk~F~~~~~L~~H~r~-H~~ekp~~C~~C~k~F~s~~~L~~H~~  279 (447)
                      +|.|..|++.|.+...|..|++. |.+   +.|+.|++.|.   .|..|++
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~---~~C~~CgKsF~---~l~~H~~   45 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTL---TKCPVCNKSYR---RLNQHFY   45 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCC---CccCCCCCEeC---Chhhhhc
Confidence            36677777777777777777763 442   46777777776   3666665

>PHA00732 hypothetical protein

Probab=97.78  E-value=2e-05  Score=63.25  Aligned_cols=48  Identities=27%  Similarity=0.631  Sum_probs=40.6

Q ss_pred             cccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhc
Q psy5888         258 PYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHE  311 (447)
Q Consensus       258 p~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~  311 (447)
                      ||.|..|++.|.+...|+.|++..|.+   +.|..|++.|.   .|..|++.+.
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~---~~C~~CgKsF~---~l~~H~~~~~   48 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTL---TKCPVCNKSYR---RLNQHFYSQY   48 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCC---CccCCCCCEeC---ChhhhhcccC
Confidence            589999999999999999999744653   68999999998   5788986654

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.56  E-value=0.00012  Score=54.36  Aligned_cols=50  Identities=30%  Similarity=0.667  Sum_probs=39.7

Q ss_pred             CccCCCCCCccCChHHHHHHHHH-hcCC-CcccCCCCCCcccchhhHHHHhhhhc
Q psy5888         230 RYACKFCGKVFPRSANLTRHLRT-HTGE-QPYKCKYCERSFSISSNLQRHVRNIH  282 (447)
Q Consensus       230 ~~~C~~Cgk~F~~~~~L~~H~r~-H~~e-kp~~C~~C~k~F~s~~~L~~H~~~~H  282 (447)
                      .|.|++|++ ..+...|..|+.. |..+ +.+.|++|...+.  .+|.+|+...|
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            489999999 5567899999885 5443 5799999998765  48999998544

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.48  E-value=3.3e-05  Score=75.68  Aligned_cols=72  Identities=17%  Similarity=0.306  Sum_probs=40.2

Q ss_pred             CCCcccCCC--CCCcccchhhHHHHhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCCCCCCCChhhhh
Q psy5888         255 GEQPYKCKY--CERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDRNGGIPSPSMIH  332 (447)
Q Consensus       255 ~ekp~~C~~--C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C~k~f~s~~~l~  332 (447)
                      ++|||+|++  |.|.+.....|+.|+..-|...+...-+          .-..|.-.-...|||.|++|+|.|++...|+
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p----------~p~~~~~F~~~~KPYrCevC~KRYKNlNGLK  415 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENP----------SPEKMNIFSAKDKPYRCEVCDKRYKNLNGLK  415 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccccCcccCCCC----------CccccccccccCCceeccccchhhccCccce
Confidence            358888887  8888888888888876333222111111          0000111122356777777777777666666


Q ss_pred             hccC
Q psy5888         333 NRCR  336 (447)
Q Consensus       333 ~H~~  336 (447)
                      .|..
T Consensus       416 YHr~  419 (423)
T COG5189         416 YHRK  419 (423)
T ss_pred             eccc
Confidence            6654

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.28  E-value=0.00014  Score=43.98  Aligned_cols=23  Identities=52%  Similarity=1.156  Sum_probs=15.0

Q ss_pred             ccCCCCCCccCChHHHHHHHHHh
Q psy5888         231 YACKFCGKVFPRSANLTRHLRTH  253 (447)
Q Consensus       231 ~~C~~Cgk~F~~~~~L~~H~r~H  253 (447)
                      |.|+.|++.|.+...|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            45666666666666666666654

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.21  E-value=0.00017  Score=70.87  Aligned_cols=72  Identities=19%  Similarity=0.262  Sum_probs=45.1

Q ss_pred             CCCCCCCCC--CCcccCCchhHHHHHhhhcCCCCcccCCCCCCCCChhhhhhccCCCCCCCCCCCchhhhccccccccCC
Q psy5888         284 KEKPFKCPL--CDRCFGQQTNLDRHLKKHEADGPTILDDRNGGIPSPSMIHNRCRPPSGILNDDSYFEEIRSFMGKVSAD  361 (447)
Q Consensus       284 ~~kp~~C~~--C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C~k~f~s~~~l~~H~~~h~~~~~~~~~~~~~c~~Cgk~f~~  361 (447)
                      ++|||+|++  |.+.|.....|+.|+.--|         |.........    -..+......++.  +.|.+|+|.|..
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH---------~~~~~~~~p~----p~~~~~F~~~~KP--YrCevC~KRYKN  410 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGH---------QNQKLHENPS----PEKMNIFSAKDKP--YRCEVCDKRYKN  410 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccc---------cCcccCCCCC----ccccccccccCCc--eeccccchhhcc
Confidence            358999987  9999999999999976522         2222110000    0011111223334  366999999999


Q ss_pred             hhHHHHHHH
Q psy5888         362 GNRLVQRVS  370 (447)
Q Consensus       362 ~~~L~~H~~  370 (447)
                      ...|.=|+.
T Consensus       411 lNGLKYHr~  419 (423)
T COG5189         411 LNGLKYHRK  419 (423)
T ss_pred             Cccceeccc
Confidence            999988854

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.13  E-value=0.00022  Score=58.58  Aligned_cols=73  Identities=22%  Similarity=0.587  Sum_probs=20.9

Q ss_pred             cCCCCCCccCChHHHHHHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCCCcccCCchhHHHHHhhh
Q psy5888         232 ACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH  310 (447)
Q Consensus       232 ~C~~Cgk~F~~~~~L~~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H  310 (447)
                      +|.+|+..|.....|..||...++-.   .. ....+.....+..+++ . .....+.|.+|++.|.+...|..|++.+
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~---~~-~~~~l~~~~~~~~~~~-~-~~~~~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFD---IP-DQKYLVDPNRLLNYLR-K-KVKESFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             ------------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             Cccccccccccccccccccccccccc---cc-cccccccccccccccc-c-ccCCCCCCCccCCCCcCHHHHHHHHcCc
Confidence            48899999999999999997555421   11 1222233444444443 1 1223589999999999999999999874

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=97.11  E-value=0.0014  Score=65.28  Aligned_cols=136  Identities=18%  Similarity=0.250  Sum_probs=87.6

Q ss_pred             ccCCC--CCCccCChHHHHHHHHHhcCCCcccCCCCC---C------cccchhhHHHHhhhhccCCCCC----CCCCCCc
Q psy5888         231 YACKF--CGKVFPRSANLTRHLRTHTGEQPYKCKYCE---R------SFSISSNLQRHVRNIHNKEKPF----KCPLCDR  295 (447)
Q Consensus       231 ~~C~~--Cgk~F~~~~~L~~H~r~H~~ekp~~C~~C~---k------~F~s~~~L~~H~~~~H~~~kp~----~C~~C~k  295 (447)
                      |.|+.  |.........|+.|.+..++.  +.|.+|-   +      ...++..|..|.. .-..+..|    .|.+|..
T Consensus       152 F~CP~skc~~~C~~~k~lk~H~K~~H~~--~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~-~G~~e~GFKGHP~C~FC~~  228 (493)
T COG5236         152 FKCPKSKCHRRCGSLKELKKHYKAQHGF--VLCSECIGNKKDFWNEIRLFRSSTLRDHKN-GGLEEEGFKGHPLCIFCKI  228 (493)
T ss_pred             hcCCchhhhhhhhhHHHHHHHHHhhcCc--EEhHhhhcCcccCccceeeeeccccccccc-CCccccCcCCCchhhhccc
Confidence            77876  666666677899999976653  6787763   2      3345667777865 33333233    5999999


Q ss_pred             ccCCchhHHHHHhhhcCCCCcccCCCCCC-------CCChhhhhhccCCCCCCCCCCCchhhhccccccccCChhHHHHH
Q psy5888         296 CFGQQTNLDRHLKKHEADGPTILDDRNGG-------IPSPSMIHNRCRPPSGILNDDSYFEEIRSFMGKVSADGNRLVQR  368 (447)
Q Consensus       296 ~F~~~~~L~~Hlr~H~~ekp~~C~~C~k~-------f~s~~~l~~H~~~h~~~~~~~~~~~~~c~~Cgk~f~~~~~L~~H  368 (447)
                      .|.....|.+|+|..| |+   |-+|.++       |.+-..|..|.+..|-.-   .+..|.-..| .+|...-.|..|
T Consensus       229 ~FYdDDEL~~HcR~~H-E~---ChICD~v~p~~~QYFK~Y~~Le~HF~~~hy~c---t~qtc~~~k~-~vf~~~~el~~h  300 (493)
T COG5236         229 YFYDDDELRRHCRLRH-EA---CHICDMVGPIRYQYFKSYEDLEAHFRNAHYCC---TFQTCRVGKC-YVFPYHTELLEH  300 (493)
T ss_pred             eecChHHHHHHHHhhh-hh---hhhhhccCccchhhhhCHHHHHHHhhcCceEE---EEEEEecCcE-EEeccHHHHHHH
Confidence            9999999999998754 23   5555544       666667788876544210   0111111111 478999999999


Q ss_pred             HHhhcccCc
Q psy5888         369 VSSLSRANY  377 (447)
Q Consensus       369 ~~~~~~~~~  377 (447)
                      +..++....
T Consensus       301 ~~~~h~~~~  309 (493)
T COG5236         301 LTRFHKVNA  309 (493)
T ss_pred             HHHHhhccc
Confidence            976655444

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.05  E-value=0.00025  Score=42.87  Aligned_cols=22  Identities=41%  Similarity=1.247  Sum_probs=11.1

Q ss_pred             CCCCCCCcccCCchhHHHHHhh
Q psy5888         288 FKCPLCDRCFGQQTNLDRHLKK  309 (447)
Q Consensus       288 ~~C~~C~k~F~~~~~L~~Hlr~  309 (447)
                      |.|+.|++.|.+...|..|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            3455555555555555555544

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=96.85  E-value=0.00077  Score=40.53  Aligned_cols=23  Identities=43%  Similarity=1.048  Sum_probs=14.1

Q ss_pred             ccCCCCCCccCChHHHHHHHHHh
Q psy5888         231 YACKFCGKVFPRSANLTRHLRTH  253 (447)
Q Consensus       231 ~~C~~Cgk~F~~~~~L~~H~r~H  253 (447)
                      |.|.+|++.|.+...|..|++.|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            45666777777777777776655

...

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=96.76  E-value=0.00077  Score=40.55  Aligned_cols=23  Identities=35%  Similarity=1.125  Sum_probs=12.3

Q ss_pred             CCCCCCCcccCCchhHHHHHhhh
Q psy5888         288 FKCPLCDRCFGQQTNLDRHLKKH  310 (447)
Q Consensus       288 ~~C~~C~k~F~~~~~L~~Hlr~H  310 (447)
                      |.|++|++.|.+...|..|++.|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            45566666666666666665554

...

>KOG2231|consensus

Probab=96.69  E-value=0.0026  Score=69.24  Aligned_cols=101  Identities=22%  Similarity=0.338  Sum_probs=66.9

Q ss_pred             cCCCCCCccCChHHHHHHHH-HhcCCCcccCCCCC---------CcccchhhHHHHhhhhccCCC----CCCCCCCCccc
Q psy5888         232 ACKFCGKVFPRSANLTRHLR-THTGEQPYKCKYCE---------RSFSISSNLQRHVRNIHNKEK----PFKCPLCDRCF  297 (447)
Q Consensus       232 ~C~~Cgk~F~~~~~L~~H~r-~H~~ekp~~C~~C~---------k~F~s~~~L~~H~~~~H~~~k----p~~C~~C~k~F  297 (447)
                      .|.+| -.|.....|+.|++ .|   +-+.|.+|-         ...-+...|..|+..--.+++    --.|.+|...|
T Consensus       117 ~~~~c-~~~~s~~~Lk~H~~~~H---~~~~c~lC~~~~kif~~e~k~Yt~~el~~h~~~gd~d~~s~rGhp~C~~C~~~f  192 (669)
T KOG2231|consen  117 ECLHC-TEFKSVENLKNHMRDQH---KLHLCSLCLQNLKIFINERKLYTRAELNLHLMFGDPDDESCRGHPLCKFCHERF  192 (669)
T ss_pred             CCccc-cchhHHHHHHHHHHHhh---hhhccccccccceeeeeeeehehHHHHHHHHhcCCCccccccCCccchhhhhhh
Confidence            35555 45558889999996 45   235565542         223345667788763222222    14689999999


Q ss_pred             CCchhHHHHHhhhcCCCCcccCCC------CCCCCChhhhhhccCCCCC
Q psy5888         298 GQQTNLDRHLKKHEADGPTILDDR------NGGIPSPSMIHNRCRPPSG  340 (447)
Q Consensus       298 ~~~~~L~~Hlr~H~~ekp~~C~~C------~k~f~s~~~l~~H~~~h~~  340 (447)
                      -....|.+|++.+|    |.|-+|      +.-|.....|..|.+.+|-
T Consensus       193 ld~~el~rH~~~~h----~~chfC~~~~~~neyy~~~~dLe~HfR~~Hf  237 (669)
T KOG2231|consen  193 LDDDELYRHLRFDH----EFCHFCDYKTGQNEYYNDYDDLEEHFRKGHF  237 (669)
T ss_pred             ccHHHHHHhhccce----eheeecCcccccchhcccchHHHHHhhhcCc
Confidence            99999999999877    445555      3446677788999887773

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=96.62  E-value=0.00075  Score=68.94  Aligned_cols=140  Identities=24%  Similarity=0.282  Sum_probs=94.0

Q ss_pred             CCccCCCCCCccCChHHHHHHHH--HhcCC--CcccCC--CCCCcccchhhHHHHhhhhccCCCCCCCCC--CCcccCCc
Q psy5888         229 DRYACKFCGKVFPRSANLTRHLR--THTGE--QPYKCK--YCERSFSISSNLQRHVRNIHNKEKPFKCPL--CDRCFGQQ  300 (447)
Q Consensus       229 k~~~C~~Cgk~F~~~~~L~~H~r--~H~~e--kp~~C~--~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~--C~k~F~~~  300 (447)
                      .++.|..|...|.+...|.+|.+  .|.++  +++.|+  +|++.|.+...+.+|.. .|.+...+.|..  |...+...
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  366 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHIL-LHTSISPAKEKLLNSSSKFSPL  366 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcc-cccCCCccccccccCccccccc
Confidence            46899999999999999999999  89999  999999  79999999999999998 899888777765  44444433


Q ss_pred             hhH-----HHHHhhhcCCCCcccC--CCCCCCCChhhhhhccCCCCCCCCCCCchhhhccccccccCChhHHHHHHHhhc
Q psy5888         301 TNL-----DRHLKKHEADGPTILD--DRNGGIPSPSMIHNRCRPPSGILNDDSYFEEIRSFMGKVSADGNRLVQRVSSLS  373 (447)
Q Consensus       301 ~~L-----~~Hlr~H~~ekp~~C~--~C~k~f~s~~~l~~H~~~h~~~~~~~~~~~~~c~~Cgk~f~~~~~L~~H~~~~~  373 (447)
                      ..-     ..........+.+.|.  .|...+.....+..|...+.    ......+.+..|.+.|.....+..|++.+.
T Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  442 (467)
T COG5048         367 LNNEPPQSLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHIITHL----SFRPYNCKNPPCSKSFNRHYNLIPHKKIHT  442 (467)
T ss_pred             cCCCCccchhhccCccCCccccccccchhhhhcccccccccccccc----ccCCcCCCCCcchhhccCcccccccccccc
Confidence            331     1111112223333333  35555555555555544433    223334556777787777777777765433

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.50  E-value=0.0014  Score=47.46  Aligned_cols=41  Identities=29%  Similarity=0.624  Sum_probs=24.1

Q ss_pred             HHHhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCC
Q psy5888         275 QRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGP  315 (447)
Q Consensus       275 ~~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp  315 (447)
                      ..+.+..+..+.|-.|++|+..+.+..+|++|+.++|+.|+
T Consensus        12 ~~~~k~~~~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   12 TKKPKSKSQSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             ----CCCCTTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             hhHHHHhhccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            34444344556788899999989888899999888877664

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=96.37  E-value=0.0007  Score=55.55  Aligned_cols=22  Identities=14%  Similarity=0.098  Sum_probs=14.0

Q ss_pred             hccccccccCChhHHHHHHHhh
Q psy5888         351 IRSFMGKVSADGNRLVQRVSSL  372 (447)
Q Consensus       351 ~c~~Cgk~f~~~~~L~~H~~~~  372 (447)
                      .|..|++.|.+...|..||+..
T Consensus        52 ~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen   52 RCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             EBSSSS-EESSHHHHHHHHHHT
T ss_pred             CCCccCCCCcCHHHHHHHHcCc
Confidence            5567777777777777776644

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=96.37  E-value=0.0016  Score=40.87  Aligned_cols=24  Identities=38%  Similarity=0.836  Sum_probs=14.9

Q ss_pred             ccCCCCCCccCChHHHHHHHHHhc
Q psy5888         231 YACKFCGKVFPRSANLTRHLRTHT  254 (447)
Q Consensus       231 ~~C~~Cgk~F~~~~~L~~H~r~H~  254 (447)
                      |.|..|++.|.+...|..|++.|.
T Consensus         2 ~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    2 FECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             EEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCccCCccCChhHHHHHhHHhc
Confidence            566666666666666666665553

>KOG2231|consensus

Probab=96.29  E-value=0.0056  Score=66.69  Aligned_cols=76  Identities=22%  Similarity=0.391  Sum_probs=53.7

Q ss_pred             cCCCCCCcccchhhHHHHhhhhccCCCCCCCCCC---------CcccCCchhHHHHHhhhcC-CCC----cccCCCCCCC
Q psy5888         260 KCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLC---------DRCFGQQTNLDRHLKKHEA-DGP----TILDDRNGGI  325 (447)
Q Consensus       260 ~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C---------~k~F~~~~~L~~Hlr~H~~-ekp----~~C~~C~k~f  325 (447)
                      .|..| -.|.....|+.|+...|..   +.|.+|         .....+...|..|++.-.. ++.    -.|.+|...|
T Consensus       117 ~~~~c-~~~~s~~~Lk~H~~~~H~~---~~c~lC~~~~kif~~e~k~Yt~~el~~h~~~gd~d~~s~rGhp~C~~C~~~f  192 (669)
T KOG2231|consen  117 ECLHC-TEFKSVENLKNHMRDQHKL---HLCSLCLQNLKIFINERKLYTRAELNLHLMFGDPDDESCRGHPLCKFCHERF  192 (669)
T ss_pred             CCccc-cchhHHHHHHHHHHHhhhh---hccccccccceeeeeeeehehHHHHHHHHhcCCCccccccCCccchhhhhhh
Confidence            46666 6666899999999766754   556554         2233456678888776322 322    4699999999


Q ss_pred             CChhhhhhccCCCC
Q psy5888         326 PSPSMIHNRCRPPS  339 (447)
Q Consensus       326 ~s~~~l~~H~~~h~  339 (447)
                      -....|..|++.+|
T Consensus       193 ld~~el~rH~~~~h  206 (669)
T KOG2231|consen  193 LDDDELYRHLRFDH  206 (669)
T ss_pred             ccHHHHHHhhccce
Confidence            99999999988665

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=96.23  E-value=0.0019  Score=40.53  Aligned_cols=23  Identities=30%  Similarity=0.782  Sum_probs=13.0

Q ss_pred             CCCCCCCcccCCchhHHHHHhhh
Q psy5888         288 FKCPLCDRCFGQQTNLDRHLKKH  310 (447)
Q Consensus       288 ~~C~~C~k~F~~~~~L~~Hlr~H  310 (447)
                      |.|..|++.|.....|..|++.|
T Consensus         2 ~~C~~C~~~F~~~~~l~~H~~~h   24 (27)
T PF13912_consen    2 FECDECGKTFSSLSALREHKRSH   24 (27)
T ss_dssp             EEETTTTEEESSHHHHHHHHCTT
T ss_pred             CCCCccCCccCChhHHHHHhHHh
Confidence            45555555555555555555554

>smart00355 ZnF_C2H2 zinc finger

Probab=95.72  E-value=0.011  Score=35.82  Aligned_cols=23  Identities=52%  Similarity=1.050  Sum_probs=14.6

Q ss_pred             ccCCCCCCccCChHHHHHHHHHh
Q psy5888         231 YACKFCGKVFPRSANLTRHLRTH  253 (447)
Q Consensus       231 ~~C~~Cgk~F~~~~~L~~H~r~H  253 (447)
                      |.|..|++.|.....|..|++.|
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHh
Confidence            45666666666666666666654

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=95.63  E-value=0.013  Score=42.53  Aligned_cols=31  Identities=35%  Similarity=0.681  Sum_probs=18.9

Q ss_pred             CCCccCCCCCCccCChHHHHHHHHHhcCCCc
Q psy5888         228 KDRYACKFCGKVFPRSANLTRHLRTHTGEQP  258 (447)
Q Consensus       228 ~k~~~C~~Cgk~F~~~~~L~~H~r~H~~ekp  258 (447)
                      ..+..|++|+..+.+..+|.+|+..+++.||
T Consensus        22 ~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   22 EQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             S--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             CCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            4567788888888888888888877766654

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PRK04860 hypothetical protein; Provisional

Probab=95.60  E-value=0.0066  Score=55.28  Aligned_cols=40  Identities=30%  Similarity=0.719  Sum_probs=30.3

Q ss_pred             CCccCCCCCCccCChHHHHHHHHHhcCCCcccCCCCCCcccchh
Q psy5888         229 DRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISS  272 (447)
Q Consensus       229 k~~~C~~Cgk~F~~~~~L~~H~r~H~~ekp~~C~~C~k~F~s~~  272 (447)
                      -.|.|. |++   ....+.+|.++|+++++|.|..|++.|....
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~~  157 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFKG  157 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEec
Confidence            358887 887   4557788888888888888888888776543

>smart00355 ZnF_C2H2 zinc finger

Probab=95.46  E-value=0.011  Score=35.72  Aligned_cols=24  Identities=29%  Similarity=0.974  Sum_probs=17.1

Q ss_pred             CCCCCCCcccCCchhHHHHHhhhc
Q psy5888         288 FKCPLCDRCFGQQTNLDRHLKKHE  311 (447)
Q Consensus       288 ~~C~~C~k~F~~~~~L~~Hlr~H~  311 (447)
                      |.|..|++.|.....|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            467777777777777777777553

>KOG2482|consensus

Probab=95.13  E-value=0.012  Score=58.80  Aligned_cols=141  Identities=15%  Similarity=0.160  Sum_probs=79.1

Q ss_pred             CCccCCCCCCccC-ChHHHHHHHH-HhcC--C-------------------CcccCCCCCCcccchhhHHHHhhhh-ccC
Q psy5888         229 DRYACKFCGKVFP-RSANLTRHLR-THTG--E-------------------QPYKCKYCERSFSISSNLQRHVRNI-HNK  284 (447)
Q Consensus       229 k~~~C~~Cgk~F~-~~~~L~~H~r-~H~~--e-------------------kp~~C~~C~k~F~s~~~L~~H~~~~-H~~  284 (447)
                      ...+|-+|+..+. ..+.+..|+- .|.-  .                   ..+.|-+|.+.|..+..|+.||+.. |..
T Consensus       143 fslqClFCn~e~lgnRs~~l~Hlf~~H~lniGlpDniVyvnelLehLkekL~r~~CLyCekifrdkntLkeHMrkK~Hrr  222 (423)
T KOG2482|consen  143 FSLQCLFCNNEGLGNRSEILEHLFHVHGLNIGLPDNIVYVNELLEHLKEKLERLRCLYCEKIFRDKNTLKEHMRKKRHRR  222 (423)
T ss_pred             eeeEEEEecchhcccHHHHHHHHHHHhhhccCCCcceeeHHHHHHHHHHHHhhheeeeeccccCCcHHHHHHHHhccCcc
Confidence            3467999976654 4456666765 3321  1                   1488999999999999999999842 221


Q ss_pred             CCCCCCCCCCccc------CCchhHHHH--H--hhh--c-------------CCCC--cccCCCCCCCCChhhhhhccCC
Q psy5888         285 EKPFKCPLCDRCF------GQQTNLDRH--L--KKH--E-------------ADGP--TILDDRNGGIPSPSMIHNRCRP  337 (447)
Q Consensus       285 ~kp~~C~~C~k~F------~~~~~L~~H--l--r~H--~-------------~ekp--~~C~~C~k~f~s~~~l~~H~~~  337 (447)
                      -.| +-..-.+-|      ..++-...|  .  .+.  .             +..+  .+|-.|...+.+...|..|++.
T Consensus       223 inP-knreYDkfyiINY~ev~ks~t~~~~e~dret~~d~~E~D~~wsDw~ed~a~a~~v~CLfC~~~~en~~~l~eHmk~  301 (423)
T KOG2482|consen  223 INP-KNREYDKFYIINYLEVGKSWTIVHSEDDRETNEDINETDDTWSDWNEDDAEALSVVCLFCTNFYENPVFLFEHMKI  301 (423)
T ss_pred             cCC-CccccceEEEEeHhhcCCccchhhhhhhhhhhccccccccchhhhhcCCCCccceEEEeeccchhhHHHHHHHHHH
Confidence            111 000000000      000000111  1  100  0             0111  4677777777777777777665


Q ss_pred             CCC---------------------CCCCCCchhhhccccccccCChhHHHHHHH
Q psy5888         338 PSG---------------------ILNDDSYFEEIRSFMGKVSADGNRLVQRVS  370 (447)
Q Consensus       338 h~~---------------------~~~~~~~~~~~c~~Cgk~f~~~~~L~~H~~  370 (447)
                      .|.                     ...+.....+.|-.|.-.|.....|..||.
T Consensus       302 vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~hm~  355 (423)
T KOG2482|consen  302 VHEFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGLLIHMV  355 (423)
T ss_pred             HHHhhHHhhccccccchhhhhhHHHHHHHHhhccccccccccccCcchhhhhcc
Confidence            442                     112334455678899999999999999985

>KOG1146|consensus

Probab=95.03  E-value=0.0093  Score=68.63  Aligned_cols=77  Identities=22%  Similarity=0.417  Sum_probs=57.2

Q ss_pred             CCCCCCccCChHHHHHHHH-HhcCCCcccCCCCCCcccchhhHHHHhhhhcc------------------------CCCC
Q psy5888         233 CKFCGKVFPRSANLTRHLR-THTGEQPYKCKYCERSFSISSNLQRHVRNIHN------------------------KEKP  287 (447)
Q Consensus       233 C~~Cgk~F~~~~~L~~H~r-~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~------------------------~~kp  287 (447)
                      |.-|+..|.+...+.-|+. .|...+-|+|+.|++.|.....|..|+|.+|.                        +.++
T Consensus       439 ~~~~e~~~~s~r~~~~~t~~L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p  518 (1406)
T KOG1146|consen  439 LTKAEPLLESKRSLEGQTVVLHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKP  518 (1406)
T ss_pred             ccchhhhhhhhcccccceeeeecccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCc
Confidence            4446666666666666655 45556778888888888888888888886443                        2357


Q ss_pred             CCCCCCCcccCCchhHHHHHhh
Q psy5888         288 FKCPLCDRCFGQQTNLDRHLKK  309 (447)
Q Consensus       288 ~~C~~C~k~F~~~~~L~~Hlr~  309 (447)
                      |.|..|...+..+..|.+|+..
T Consensus       519 ~~C~~C~~stttng~LsihlqS  540 (1406)
T KOG1146|consen  519 YPCRACNYSTTTNGNLSIHLQS  540 (1406)
T ss_pred             ccceeeeeeeecchHHHHHHHH
Confidence            8999999999999999999864

>PRK04860 hypothetical protein; Provisional

Probab=94.99  E-value=0.015  Score=53.05  Aligned_cols=37  Identities=16%  Similarity=0.369  Sum_probs=30.5

Q ss_pred             CCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCCCCCCCC
Q psy5888         287 PFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDRNGGIPS  327 (447)
Q Consensus       287 p~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C~k~f~s  327 (447)
                      +|.|. |+.   ....+.+|.++|.++++|.|..|+..|..
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~  155 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVF  155 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEE
Confidence            58887 886   66778889999999999999999888753

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=94.91  E-value=0.0095  Score=59.44  Aligned_cols=101  Identities=15%  Similarity=0.195  Sum_probs=70.8

Q ss_pred             cccCCC--CCCcccchhhHHHHhhhhccCCCCCCCCCCC---cccC------CchhHHHHHhhhcCC---CC-cccCCCC
Q psy5888         258 PYKCKY--CERSFSISSNLQRHVRNIHNKEKPFKCPLCD---RCFG------QQTNLDRHLKKHEAD---GP-TILDDRN  322 (447)
Q Consensus       258 p~~C~~--C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C~---k~F~------~~~~L~~Hlr~H~~e---kp-~~C~~C~  322 (447)
                      .|.|+.  |.........|+.|.+..|..   +.|.+|-   +.|.      +...|..|...-..+   |- -.|.+|.
T Consensus       151 ~F~CP~skc~~~C~~~k~lk~H~K~~H~~---~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GFKGHP~C~FC~  227 (493)
T COG5236         151 SFKCPKSKCHRRCGSLKELKKHYKAQHGF---VLCSECIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGFKGHPLCIFCK  227 (493)
T ss_pred             HhcCCchhhhhhhhhHHHHHHHHHhhcCc---EEhHhhhcCcccCccceeeeecccccccccCCccccCcCCCchhhhcc
Confidence            488887  777777788899999866643   6777762   3343      345666776543222   22 3699999


Q ss_pred             CCCCChhhhhhccCCCCCCCCCCCchhhhcccccc-------ccCChhHHHHHHHh
Q psy5888         323 GGIPSPSMIHNRCRPPSGILNDDSYFEEIRSFMGK-------VSADGNRLVQRVSS  371 (447)
Q Consensus       323 k~f~s~~~l~~H~~~h~~~~~~~~~~~~~c~~Cgk-------~f~~~~~L~~H~~~  371 (447)
                      ..|....+|..|++..|.          .|-+|.+       .|.+...|..|.+.
T Consensus       228 ~~FYdDDEL~~HcR~~HE----------~ChICD~v~p~~~QYFK~Y~~Le~HF~~  273 (493)
T COG5236         228 IYFYDDDELRRHCRLRHE----------ACHICDMVGPIRYQYFKSYEDLEAHFRN  273 (493)
T ss_pred             ceecChHHHHHHHHhhhh----------hhhhhhccCccchhhhhCHHHHHHHhhc
Confidence            999999999999987663          3445544       47888999999863

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=94.42  E-value=0.019  Score=35.14  Aligned_cols=22  Identities=36%  Similarity=0.901  Sum_probs=12.9

Q ss_pred             ccCCCCCCccCChHHHHHHHHH
Q psy5888         231 YACKFCGKVFPRSANLTRHLRT  252 (447)
Q Consensus       231 ~~C~~Cgk~F~~~~~L~~H~r~  252 (447)
                      |.|.+|++.|.+...|..|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            4566666666666666666553

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=94.29  E-value=0.023  Score=34.54  Aligned_cols=23  Identities=48%  Similarity=1.047  Sum_probs=13.8

Q ss_pred             CCCCCCCcccCCchhHHHHHhhhc
Q psy5888         288 FKCPLCDRCFGQQTNLDRHLKKHE  311 (447)
Q Consensus       288 ~~C~~C~k~F~~~~~L~~Hlr~H~  311 (447)
                      |+|..|+.... ...|.+|++.|+
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            46777776666 666777776654

>KOG2785|consensus

Probab=94.04  E-value=0.097  Score=53.24  Aligned_cols=148  Identities=14%  Similarity=0.163  Sum_probs=89.9

Q ss_pred             CccCCCCCCccCChHHHHHHHH--Hhc-----------------------------------CCCcccCCCCCCcccchh
Q psy5888         230 RYACKFCGKVFPRSANLTRHLR--THT-----------------------------------GEQPYKCKYCERSFSISS  272 (447)
Q Consensus       230 ~~~C~~Cgk~F~~~~~L~~H~r--~H~-----------------------------------~ekp~~C~~C~k~F~s~~  272 (447)
                      -|.|..|...|.....-+.|++  +|.                                   ++.++.|.+|.+.|.+..
T Consensus         3 ~ftC~tC~v~F~~ad~Qr~HyKSdWHRYNLKRkVA~lPPItaE~F~~k~~s~~~~~~~~~e~~~~~~~c~~c~k~~~s~~   82 (390)
T KOG2785|consen    3 GFTCNTCNVEFDDADEQRAHYKSDWHRYNLKRKVASLPPITAEEFNEKVLSDDSEKEENLEEAESVVYCEACNKSFASPK   82 (390)
T ss_pred             cceeeceeeeeccHHHHHHHhhhhHHHhhHHhHhhcCCCcCHHHHhHHHhhhhhhhhhhhhhcccceehHHhhccccChh
Confidence            3889999999998888888887  441                                   113588999999998888


Q ss_pred             hHHHHhhhhccCC----------------CCCC-------------CCCCCcccCCchhHHHHHhh------h------c
Q psy5888         273 NLQRHVRNIHNKE----------------KPFK-------------CPLCDRCFGQQTNLDRHLKK------H------E  311 (447)
Q Consensus       273 ~L~~H~~~~H~~~----------------kp~~-------------C~~C~k~F~~~~~L~~Hlr~------H------~  311 (447)
                      ....|+...-..+                ..+.             |..|-..+........+...      -      .
T Consensus        83 a~~~hl~Sk~h~~~~~~~~r~~e~d~a~~~q~~~~~p~~l~~~~e~e~~~~E~~~~~d~~~e~~~dd~~Edi~~d~~~e~  162 (390)
T KOG2785|consen   83 AHENHLKSKKHVENLSNHQRSEEGDSAKISQLPSRRPSNLQNKGESELKWYEVDSDEDSSEEEEEDDEEEDIEEDGDDED  162 (390)
T ss_pred             hHHHHHHHhhcchhhhhhhccccccchhhhhccccCccccccCCCcccchhhcccccccchhhccCcchhhhhhccchhc
Confidence            8888876311100                0112             22332223222222222111      0      0


Q ss_pred             CCCCcccCCCCCCCCChhhhhhccCCCCCCCC-CCCc----------------hhhhccccc---cccCChhHHHHHHHh
Q psy5888         312 ADGPTILDDRNGGIPSPSMIHNRCRPPSGILN-DDSY----------------FEEIRSFMG---KVSADGNRLVQRVSS  371 (447)
Q Consensus       312 ~ekp~~C~~C~k~f~s~~~l~~H~~~h~~~~~-~~~~----------------~~~~c~~Cg---k~f~~~~~L~~H~~~  371 (447)
                      ..-|-.|-.|++.+.+-..-..|+..+|+..- +..+                ...+|-+|+   +.|.+....+.||..
T Consensus       163 e~~Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~HM~~  242 (390)
T KOG2785|consen  163 ELIPTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAHMRD  242 (390)
T ss_pred             ccCCcceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHHHhh
Confidence            12246788899888888777888887776432 1111                122667888   889999999999975


Q ss_pred             hcccCc
Q psy5888         372 LSRANY  377 (447)
Q Consensus       372 ~~~~~~  377 (447)
                      -..+..
T Consensus       243 K~HCkl  248 (390)
T KOG2785|consen  243 KGHCKL  248 (390)
T ss_pred             ccCccc
Confidence            444333

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=93.95  E-value=0.041  Score=33.42  Aligned_cols=23  Identities=39%  Similarity=0.829  Sum_probs=13.7

Q ss_pred             ccCCCCCCccCChHHHHHHHHHhc
Q psy5888         231 YACKFCGKVFPRSANLTRHLRTHT  254 (447)
Q Consensus       231 ~~C~~Cgk~F~~~~~L~~H~r~H~  254 (447)
                      |+|.+|+.... ...|.+|++.|+
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            56777776665 666777776654

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=93.75  E-value=0.027  Score=34.49  Aligned_cols=22  Identities=32%  Similarity=0.964  Sum_probs=12.4

Q ss_pred             CCCCCCCcccCCchhHHHHHhh
Q psy5888         288 FKCPLCDRCFGQQTNLDRHLKK  309 (447)
Q Consensus       288 ~~C~~C~k~F~~~~~L~~Hlr~  309 (447)
                      |.|.+|++.|.+...|..|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            3455555555555555555543

>KOG1146|consensus

Probab=93.43  E-value=0.042  Score=63.49  Aligned_cols=102  Identities=16%  Similarity=0.152  Sum_probs=77.1

Q ss_pred             cCCCCCCcccchhhHHHHhhhhccCCCCCCCCCCCcccCCchhHHHHHhh-hcCCCCcccCCCCCCCCChhhhhhccCCC
Q psy5888         260 KCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKK-HEADGPTILDDRNGGIPSPSMIHNRCRPP  338 (447)
Q Consensus       260 ~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~-H~~ekp~~C~~C~k~f~s~~~l~~H~~~h  338 (447)
                      .|.-|+..|.++..+.-|+..+|...+-|+|+.|+..|.....|..|+|. |.....   .+|       .....|.+..
T Consensus       438 e~~~~e~~~~s~r~~~~~t~~L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~---~~c-------~~gq~~~~~a  507 (1406)
T KOG1146|consen  438 ELTKAEPLLESKRSLEGQTVVLHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQS---AYC-------KAGQNHPRLA  507 (1406)
T ss_pred             cccchhhhhhhhcccccceeeeecccccccCCccchhhhhHHHhhhcccccccccch---hHh-------Hhcccccccc
Confidence            36667888888888888888888888999999999999999999999988 443332   112       2234555555


Q ss_pred             CCCCCCCCchhhhccccccccCChhHHHHHHHh
Q psy5888         339 SGILNDDSYFEEIRSFMGKVSADGNRLVQRVSS  371 (447)
Q Consensus       339 ~~~~~~~~~~~~~c~~Cgk~f~~~~~L~~H~~~  371 (447)
                      .+...+..+....|..|...+.....|.+|+..
T Consensus       508 rg~~~~~~~~p~~C~~C~~stttng~LsihlqS  540 (1406)
T KOG1146|consen  508 RGEVYRCPGKPYPCRACNYSTTTNGNLSIHLQS  540 (1406)
T ss_pred             ccccccCCCCcccceeeeeeeecchHHHHHHHH
Confidence            544444455556779999999999999999963

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=92.94  E-value=0.029  Score=35.27  Aligned_cols=21  Identities=29%  Similarity=0.812  Sum_probs=11.8

Q ss_pred             ccCCCCCCccCChHHHHHHHH
Q psy5888         231 YACKFCGKVFPRSANLTRHLR  251 (447)
Q Consensus       231 ~~C~~Cgk~F~~~~~L~~H~r  251 (447)
                      |.|..|++.|.+...|..|++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~   22 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMK   22 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTT
T ss_pred             CCcccCCCCcCCHHHHHHHHc
Confidence            455555555555555555554

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=92.64  E-value=0.072  Score=54.29  Aligned_cols=138  Identities=20%  Similarity=0.261  Sum_probs=91.6

Q ss_pred             hccCCCCCCCchhhhhccc--ccCCCCCCCccCC--CCCCccCChHHHHHHHHHhcCCCcccCCC--CCCcccchhhHHH
Q psy5888         203 RSQLPPLANSPKQFQESIS--NNTGKPKDRYACK--FCGKVFPRSANLTRHLRTHTGEQPYKCKY--CERSFSISSNLQR  276 (447)
Q Consensus       203 ~~~~p~~~~s~~~~~~~~~--~~~~~~~k~~~C~--~Cgk~F~~~~~L~~H~r~H~~ekp~~C~~--C~k~F~s~~~L~~  276 (447)
                      +..+...+.....+..+..  .+....-+++.|.  .|++.|.+...+.+|...|.+..++.|..  |...+.....-..
T Consensus       292 ~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  371 (467)
T COG5048         292 SKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLNSSSKFSPLLNNEP  371 (467)
T ss_pred             CccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCccccccccCccccccccCCCC
Confidence            3344444444444444444  2222212789999  79999999999999999999998888876  5555554433111


Q ss_pred             Hhh----hhccCCCCCCCCC--CCcccCCchhHHHHHhhhcCCC--CcccCCCCCCCCChhhhhhccCCCCC
Q psy5888         277 HVR----NIHNKEKPFKCPL--CDRCFGQQTNLDRHLKKHEADG--PTILDDRNGGIPSPSMIHNRCRPPSG  340 (447)
Q Consensus       277 H~~----~~H~~~kp~~C~~--C~k~F~~~~~L~~Hlr~H~~ek--p~~C~~C~k~f~s~~~l~~H~~~h~~  340 (447)
                      +..    ..-...+.+.|..  |...+.....+..|...|....  .+.|..|.+.|.....+..|.+.+..
T Consensus       372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  443 (467)
T COG5048         372 PQSLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLIPHKKIHTN  443 (467)
T ss_pred             ccchhhccCccCCccccccccchhhhhccccccccccccccccCCcCCCCCcchhhccCccccccccccccc
Confidence            111    0111223355543  7788888888888988887766  46677899999988888888877653

>KOG2482|consensus

Probab=92.31  E-value=0.099  Score=52.36  Aligned_cols=111  Identities=19%  Similarity=0.352  Sum_probs=67.5

Q ss_pred             CCccCCCCCCccCChHHHHHHHHH--hcCCCc--------ccCCC--CCCccc-chhhHHHHhhhhcc------------
Q psy5888         229 DRYACKFCGKVFPRSANLTRHLRT--HTGEQP--------YKCKY--CERSFS-ISSNLQRHVRNIHN------------  283 (447)
Q Consensus       229 k~~~C~~Cgk~F~~~~~L~~H~r~--H~~ekp--------~~C~~--C~k~F~-s~~~L~~H~~~~H~------------  283 (447)
                      .++.|-+|.+.|..+..|+.|||.  |....|        |.=.+  -+++.. ....+.+-...-+.            
T Consensus       194 ~r~~CLyCekifrdkntLkeHMrkK~HrrinPknreYDkfyiINY~ev~ks~t~~~~e~dret~~d~~E~D~~wsDw~ed  273 (423)
T KOG2482|consen  194 ERLRCLYCEKIFRDKNTLKEHMRKKRHRRINPKNREYDKFYIINYLEVGKSWTIVHSEDDRETNEDINETDDTWSDWNED  273 (423)
T ss_pred             hhheeeeeccccCCcHHHHHHHHhccCcccCCCccccceEEEEeHhhcCCccchhhhhhhhhhhccccccccchhhhhcC
Confidence            358999999999999999999984  332222        11111  122111 11111000000000            


Q ss_pred             CCCC--CCCCCCCcccCCchhHHHHHhhhcC---------------------------CCCcccCCCCCCCCChhhhhhc
Q psy5888         284 KEKP--FKCPLCDRCFGQQTNLDRHLKKHEA---------------------------DGPTILDDRNGGIPSPSMIHNR  334 (447)
Q Consensus       284 ~~kp--~~C~~C~k~F~~~~~L~~Hlr~H~~---------------------------ekp~~C~~C~k~f~s~~~l~~H  334 (447)
                      +..+  ..|-+|...+.....|..||+.-|.                           .+...|..|.-.|.....|..|
T Consensus       274 ~a~a~~v~CLfC~~~~en~~~l~eHmk~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~h  353 (423)
T KOG2482|consen  274 DAEALSVVCLFCTNFYENPVFLFEHMKIVHEFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGLLIH  353 (423)
T ss_pred             CCCccceEEEeeccchhhHHHHHHHHHHHHHhhHHhhccccccchhhhhhHHHHHHHHhhccccccccccccCcchhhhh
Confidence            1112  5788898888888889999887442                           1124588999999999999999


Q ss_pred             cCCCC
Q psy5888         335 CRPPS  339 (447)
Q Consensus       335 ~~~h~  339 (447)
                      +..+.
T Consensus       354 m~e~k  358 (423)
T KOG2482|consen  354 MVEDK  358 (423)
T ss_pred             ccccc
Confidence            86553

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=91.82  E-value=0.084  Score=33.11  Aligned_cols=21  Identities=29%  Similarity=0.861  Sum_probs=15.7

Q ss_pred             ccCCCCCCcccchhhHHHHhh
Q psy5888         259 YKCKYCERSFSISSNLQRHVR  279 (447)
Q Consensus       259 ~~C~~C~k~F~s~~~L~~H~~  279 (447)
                      |.|..|++.|.+...|..|++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~   22 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMK   22 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTT
T ss_pred             CCcccCCCCcCCHHHHHHHHc
Confidence            567777777777777777765

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>KOG4173|consensus

Probab=91.36  E-value=0.065  Score=50.06  Aligned_cols=87  Identities=23%  Similarity=0.594  Sum_probs=64.0

Q ss_pred             CCccCCC--CCCccCChHHHHHHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhcc---------CCCCCCCCC--CCc
Q psy5888         229 DRYACKF--CGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHN---------KEKPFKCPL--CDR  295 (447)
Q Consensus       229 k~~~C~~--Cgk~F~~~~~L~~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~---------~~kp~~C~~--C~k  295 (447)
                      ..|.|++  |-+.|....++..|..+-++.   .|.+|.+.|.+..-|..|+...|.         |...|.|-+  |+.
T Consensus        78 ~~~~cqvagc~~~~d~lD~~E~hY~~~h~~---sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~  154 (253)
T KOG4173|consen   78 PAFACQVAGCCQVFDALDDYEHHYHTLHGN---SCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTE  154 (253)
T ss_pred             ccccccccchHHHHhhhhhHHHhhhhcccc---hhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhh
Confidence            4588988  888898888888887654443   599999999999988888875553         344578854  888


Q ss_pred             ccCCchhHHHHH-hhhcCCCCccc
Q psy5888         296 CFGQQTNLDRHL-KKHEADGPTIL  318 (447)
Q Consensus       296 ~F~~~~~L~~Hl-r~H~~ekp~~C  318 (447)
                      .|.+...-++|+ +.|.--..|..
T Consensus       155 KFkT~r~RkdH~I~~Hk~Pa~frF  178 (253)
T KOG4173|consen  155 KFKTSRDRKDHMIRMHKYPADFRF  178 (253)
T ss_pred             hhhhhhhhhhHHHHhccCCcceee
Confidence            888888888886 44654444443

>KOG2893|consensus

Probab=90.45  E-value=0.1  Score=49.75  Aligned_cols=49  Identities=22%  Similarity=0.577  Sum_probs=37.9

Q ss_pred             ccCCCCCCccCChHHHHHHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhcc
Q psy5888         231 YACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHN  283 (447)
Q Consensus       231 ~~C~~Cgk~F~~~~~L~~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~  283 (447)
                      --|-+|++.|....-|..|++.    |-|+|.+|.|.+.+--.|..|-..+|.
T Consensus        11 pwcwycnrefddekiliqhqka----khfkchichkkl~sgpglsihcmqvhk   59 (341)
T KOG2893|consen   11 PWCWYCNREFDDEKILIQHQKA----KHFKCHICHKKLFSGPGLSIHCMQVHK   59 (341)
T ss_pred             ceeeecccccchhhhhhhhhhh----ccceeeeehhhhccCCCceeehhhhhh
Confidence            3477899999999999988875    348999999888777777777544554

>TIGR00622 ssl1 transcription factor ssl1

Probab=89.44  E-value=0.7  Score=39.46  Aligned_cols=91  Identities=18%  Similarity=0.250  Sum_probs=58.7

Q ss_pred             ccCCCCCCccCChHHHHHHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhcc------CCCC-------CCCCCCCccc
Q psy5888         231 YACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHN------KEKP-------FKCPLCDRCF  297 (447)
Q Consensus       231 ~~C~~Cgk~F~~~~~L~~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~------~~kp-------~~C~~C~k~F  297 (447)
                      |.|+.|+-..              -+-|..|++|+-......+|.|...  |.      .+.+       ..|-.|...|
T Consensus         2 Y~CPrC~skv--------------C~LP~~CpiCgLtLVss~HLARSyH--HLfPl~~f~ev~~~~~~~~~~C~~C~~~f   65 (112)
T TIGR00622         2 YFCPQCRAKV--------------CELPVECPICGLTLILSTHLARSYH--HLFPLKAFQEIPLEEYNGSRFCFGCQGPF   65 (112)
T ss_pred             ccCCCCCCCc--------------cCCCCcCCcCCCEEeccchHHHhhh--ccCCCcccccccccccCCCCcccCcCCCC
Confidence            6777777433              2457889999988888888887643  32      1111       2388888888


Q ss_pred             CCchhHHHHHhhhcCCCCcccCCCCCCCCChhhhhhccCCCC
Q psy5888         298 GQQTNLDRHLKKHEADGPTILDDRNGGIPSPSMIHNRCRPPS  339 (447)
Q Consensus       298 ~~~~~L~~Hlr~H~~ekp~~C~~C~k~f~s~~~l~~H~~~h~  339 (447)
                      .......  ...-.....|.|+.|...|-..-+...|...|.
T Consensus        66 ~~~~~~~--~~~~~~~~~y~C~~C~~~FC~dCD~fiHe~Lh~  105 (112)
T TIGR00622        66 PKPPVSP--FDELKDSHRYVCAVCKNVFCVDCDVFVHESLHC  105 (112)
T ss_pred             CCccccc--ccccccccceeCCCCCCccccccchhhhhhccC
Confidence            7643111  000123446889999999887777777776665

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=89.14  E-value=0.35  Score=29.97  Aligned_cols=20  Identities=30%  Similarity=0.840  Sum_probs=11.7

Q ss_pred             ccCCCCCCccCChHHHHHHHH
Q psy5888         231 YACKFCGKVFPRSANLTRHLR  251 (447)
Q Consensus       231 ~~C~~Cgk~F~~~~~L~~H~r  251 (447)
                      ..|++||+.| ....|.+|+.
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHH
Confidence            3566666666 4555666654

>KOG4167|consensus

Probab=89.03  E-value=0.52  Score=51.67  Aligned_cols=28  Identities=36%  Similarity=0.808  Sum_probs=24.9

Q ss_pred             CCCCccCCCCCCccCChHHHHHHHHHhc
Q psy5888         227 PKDRYACKFCGKVFPRSANLTRHLRTHT  254 (447)
Q Consensus       227 ~~k~~~C~~Cgk~F~~~~~L~~H~r~H~  254 (447)
                      +...|.|..|+|+|.....+.+||++|.
T Consensus       789 ~~giFpCreC~kvF~KiKSrNAHMK~Hr  816 (907)
T KOG4167|consen  789 PTGIFPCRECGKVFFKIKSRNAHMKTHR  816 (907)
T ss_pred             CCceeehHHHHHHHHHHhhhhHHHHHHH
Confidence            4567999999999999999999999995

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=88.35  E-value=0.37  Score=29.84  Aligned_cols=19  Identities=42%  Similarity=1.024  Sum_probs=9.3

Q ss_pred             CCCCCCcccCCchhHHHHHh
Q psy5888         289 KCPLCDRCFGQQTNLDRHLK  308 (447)
Q Consensus       289 ~C~~C~k~F~~~~~L~~Hlr  308 (447)
                      .|+.||+.| ....|.+|++
T Consensus         4 ~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHHH
Confidence            455555555 3344455543

>smart00451 ZnF_U1 U1-like zinc finger

Probab=87.93  E-value=0.4  Score=31.59  Aligned_cols=23  Identities=26%  Similarity=0.704  Sum_probs=17.0

Q ss_pred             CccCCCCCCccCChHHHHHHHHH
Q psy5888         230 RYACKFCGKVFPRSANLTRHLRT  252 (447)
Q Consensus       230 ~~~C~~Cgk~F~~~~~L~~H~r~  252 (447)
                      .|.|.+|++.|.....+..|++.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            46788888888877777777753

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG4173|consensus

Probab=87.92  E-value=0.12  Score=48.24  Aligned_cols=77  Identities=17%  Similarity=0.376  Sum_probs=56.4

Q ss_pred             CcccCCC--CCCcccchhhHHHHhhhhccCCCCCCCCCCCcccCCchhHHHHHhh-hc---------CCCCcccC--CCC
Q psy5888         257 QPYKCKY--CERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKK-HE---------ADGPTILD--DRN  322 (447)
Q Consensus       257 kp~~C~~--C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~-H~---------~ekp~~C~--~C~  322 (447)
                      ..|.|++  |-+.|....++..|....|+    -.|.+|.+.|.+...|..|+.. |.         |...|.|-  .|+
T Consensus        78 ~~~~cqvagc~~~~d~lD~~E~hY~~~h~----~sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt  153 (253)
T KOG4173|consen   78 PAFACQVAGCCQVFDALDDYEHHYHTLHG----NSCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCT  153 (253)
T ss_pred             ccccccccchHHHHhhhhhHHHhhhhccc----chhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhh
Confidence            4588988  88999999888888765564    4799999999999999999754 43         33446663  566


Q ss_pred             CCCCChhhhhhccCC
Q psy5888         323 GGIPSPSMIHNRCRP  337 (447)
Q Consensus       323 k~f~s~~~l~~H~~~  337 (447)
                      -.|.+....+.|+-.
T Consensus       154 ~KFkT~r~RkdH~I~  168 (253)
T KOG4173|consen  154 EKFKTSRDRKDHMIR  168 (253)
T ss_pred             hhhhhhhhhhhHHHH
Confidence            666666666666543

>KOG2893|consensus

Probab=86.14  E-value=0.24  Score=47.31  Aligned_cols=41  Identities=34%  Similarity=0.705  Sum_probs=18.1

Q ss_pred             CCCCCCcccchhhHHHHhhhhccCCCCCCCCCCCcccCCchhHHHH
Q psy5888         261 CKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRH  306 (447)
Q Consensus       261 C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~H  306 (447)
                      |=+|++.|....-|.+|++.     |-|+|.+|-+...+--.|..|
T Consensus        13 cwycnrefddekiliqhqka-----khfkchichkkl~sgpglsih   53 (341)
T KOG2893|consen   13 CWYCNREFDDEKILIQHQKA-----KHFKCHICHKKLFSGPGLSIH   53 (341)
T ss_pred             eeecccccchhhhhhhhhhh-----ccceeeeehhhhccCCCceee
Confidence            44455555554444444432     224555554443333334444

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=84.96  E-value=1  Score=38.04  Aligned_cols=25  Identities=20%  Similarity=0.674  Sum_probs=21.2

Q ss_pred             CCC----CCCCcccCCchhHHHHHhhhcC
Q psy5888         288 FKC----PLCDRCFGQQTNLDRHLKKHEA  312 (447)
Q Consensus       288 ~~C----~~C~k~F~~~~~L~~Hlr~H~~  312 (447)
                      |.|    ..|++.+.+...+.+|++.+|+
T Consensus        81 ~~C~~~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   81 YRCQCDPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             eeeecCCCCCCcEeccHHHHHHHHHHhcC
Confidence            888    8899988899999999887664

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>KOG4377|consensus

Probab=83.78  E-value=1.4  Score=45.49  Aligned_cols=28  Identities=11%  Similarity=-0.046  Sum_probs=23.6

Q ss_pred             hhhhccccccccCChhHHHHHHHhhccc
Q psy5888         348 FEEIRSFMGKVSADGNRLVQRVSSLSRA  375 (447)
Q Consensus       348 ~~~~c~~Cgk~f~~~~~L~~H~~~~~~~  375 (447)
                      |.|....|+..+..-+.+..|.+.+.+.
T Consensus       402 fhc~r~Gc~~tl~s~sqm~shkrkheRq  429 (480)
T KOG4377|consen  402 FHCDRLGCEATLYSVSQMASHKRKHERQ  429 (480)
T ss_pred             eeecccCCceEEEehhhhhhhhhhhhhh
Confidence            5567789999999999999998877765

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=83.33  E-value=0.89  Score=38.70  Aligned_cols=15  Identities=27%  Similarity=0.680  Sum_probs=7.7

Q ss_pred             CcccCCCCCCcccch
Q psy5888         257 QPYKCKYCERSFSIS  271 (447)
Q Consensus       257 kp~~C~~C~k~F~s~  271 (447)
                      .|..|++||..|.-.
T Consensus        25 ~PivCP~CG~~~~~~   39 (108)
T PF09538_consen   25 DPIVCPKCGTEFPPE   39 (108)
T ss_pred             CCccCCCCCCccCcc
Confidence            445555555555443

The function of members of this family is unknown.

>smart00451 ZnF_U1 U1-like zinc finger

Probab=82.54  E-value=0.87  Score=29.89  Aligned_cols=22  Identities=23%  Similarity=0.688  Sum_probs=13.3

Q ss_pred             cccCCCCCCcccchhhHHHHhh
Q psy5888         258 PYKCKYCERSFSISSNLQRHVR  279 (447)
Q Consensus       258 p~~C~~C~k~F~s~~~L~~H~~  279 (447)
                      +|.|.+|++.|.+...+..|+.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHC
Confidence            3556666666666666666654

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=82.17  E-value=1.1  Score=38.20  Aligned_cols=30  Identities=20%  Similarity=0.422  Sum_probs=21.7

Q ss_pred             CCCCCCCcccCCchhHHHHHhhhcCCCCcccCCCCCCCCCh
Q psy5888         288 FKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDRNGGIPSP  328 (447)
Q Consensus       288 ~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C~k~f~s~  328 (447)
                      ..|+.||+.|...           +..|..|++||..|.-.
T Consensus        10 R~Cp~CG~kFYDL-----------nk~PivCP~CG~~~~~~   39 (108)
T PF09538_consen   10 RTCPSCGAKFYDL-----------NKDPIVCPKCGTEFPPE   39 (108)
T ss_pred             ccCCCCcchhccC-----------CCCCccCCCCCCccCcc
Confidence            6788888888654           23677788888888654

The function of members of this family is unknown.

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=80.91  E-value=1  Score=29.79  Aligned_cols=11  Identities=36%  Similarity=1.283  Sum_probs=6.5

Q ss_pred             ccCCCCCCccC
Q psy5888         231 YACKFCGKVFP  241 (447)
Q Consensus       231 ~~C~~Cgk~F~  241 (447)
                      |.|..||..+.
T Consensus         2 ~~C~~CGy~y~   12 (33)
T cd00350           2 YVCPVCGYIYD   12 (33)
T ss_pred             EECCCCCCEEC
Confidence            56666665543

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	447
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		3e-18
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		6e-18
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		4e-15
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		7e-15
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		2e-14
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		3e-14
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		4e-14
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		4e-14
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		4e-14
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		5e-14
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		6e-14
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		6e-14
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		7e-14
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		8e-14
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		1e-13
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		7e-13
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		1e-12
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		8e-12
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		1e-10
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		1e-09
1x6e_A	72	Solution Structures Of The C2h2 Type Zinc Finger Do		1e-08
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		1e-08
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		8e-07
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		2e-08
1f2i_G	73	Cocrystal Structure Of Selected Zinc Finger Dimer B		2e-08
1f2i_G	73	Cocrystal Structure Of Selected Zinc Finger Dimer B		8e-06
1tf3_A	92	Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures		3e-08
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		6e-08
1llm_C	88	Crystal Structure Of A Zif23-Gcn4 Chimera Bound To		9e-08
3uk3_C	57	Crystal Structure Of Znf217 Bound To Dna Length = 5		1e-07
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		2e-07
2ct1_A	77	Solution Structure Of The Zinc Finger Domain Of Tra		5e-07
2adr_A	60	Adr1 Dna-Binding Domain From Saccharomyces Cerevisi		6e-07
2epa_A	72	Solution Structure Of The First And Second Zf-C2h2		1e-06
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		3e-06
1tf6_A	190	Co-crystal Structure Of Xenopus Tfiiia Zinc Finger		3e-06
4gzn_C	60	Mouse Zfp57 Zinc Fingers In Complex With Methylated		7e-06
2lt7_A	133	Solution Nmr Structure Of Kaiso Zinc Finger Dna Bin		8e-06
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		1e-05
1bbo_A	57	High-Resolution Solution Structure Of The Double Cy		2e-05
1x6h_A	86	Solution Structures Of The C2h2 Type Zinc Finger Do		5e-05
2drp_A	66	The Crystal Structure Of A Two Zinc-Finger Peptide		7e-05
2eme_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		3e-04
2j7j_A	85	Invariance Of The Zinc Finger Module: A Comparison		3e-04
1un6_B	87	The Crystal Structure Of A Zinc Finger - Rna Comple		4e-04
2ema_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		6e-04
2epr_A	48	Solution Structure Of The Secound Zinc Finger Domai		6e-04
2yrj_A	46	Solution Structure Of The C2h2-Type Zinc Finger Dom		6e-04

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 89.4 bits (220), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 43/81 (53%), Positives = 56/81 (69%), Gaps = 1/81 (1%)
Query: 231 YACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
           Y C  CGK F +S+NL +H RTHTGE+PYKC  C +SFS SS+LQ+H R  H  EKP+KC
Sbjct: 5   YKCPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQR-THTGEKPYKC 63
Query: 291 PLCDRCFGQQTNLDRHLKKHE 311
           P C + F +  +L RH + H+
Sbjct: 64  PECGKSFSRSDHLSRHQRTHQ 84

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 88.6 bits (218), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 46/98 (46%), Positives = 60/98 (61%), Gaps = 2/98 (2%)
Query: 219 SISNNTGKPKDR-YACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRH 277
           S++    +P ++ YAC  CGK F RS +L  H RTHTGE+PYKC  C +SFS   +L RH
Sbjct: 9   SVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRH 68
Query: 278 VRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGP 315
            R  H  EKP+KCP C + F Q+ NL  H + H  + P
Sbjct: 69  QR-THTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKP 105

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 39/82 (47%), Positives = 53/82 (64%), Gaps = 3/82 (3%)
Query: 231 YAC--KFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPF 288
           YAC  + C + F RSA+LTRH+R HTG++P++C+ C R+FS S +L  H+R  H  EKPF
Sbjct: 5   YACPVESCDRRFSRSADLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRT-HTGEKPF 63
Query: 289 KCPLCDRCFGQQTNLDRHLKKH 310
            C +C R F +     RH K H
Sbjct: 64  ACDICGRKFARSDERKRHTKIH 85

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 78.6 bits (192), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 39/82 (47%), Positives = 52/82 (63%), Gaps = 3/82 (3%)
Query: 231 YAC--KFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPF 288
           YAC  + C + F RSA LTRH+R HTG++P++C+ C R+FS S +L  H+R  H  EKPF
Sbjct: 5   YACPVESCDRRFSRSAELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRT-HTGEKPF 63
Query: 289 KCPLCDRCFGQQTNLDRHLKKH 310
            C +C R F +     RH K H
Sbjct: 64  ACDICGRKFARSDERKRHTKIH 85

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 38/87 (43%), Positives = 54/87 (62%), Gaps = 2/87 (2%)
Query: 231 YACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
           + C+ CGK F R   L  H+R HTG +PYKCK C+ + + SS+L +H+R IH+ E+PFKC
Sbjct: 9   HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLR-IHSDERPFKC 67
Query: 291 PLCDRCFGQQTNLDRHLKKHEAD-GPT 316
            +C       + L  HL+ H  D GP+
Sbjct: 68  QICPYASRNSSQLTVHLRSHTGDSGPS 94

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 76.6 bits (187), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 38/82 (46%), Positives = 52/82 (63%), Gaps = 3/82 (3%)
Query: 231 YAC--KFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPF 288
           YAC  + C + F  S+NLTRH+R HTG++P++C+ C R+FS S +L  H+R  H  EKPF
Sbjct: 5   YACPVESCDRRFSDSSNLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRT-HTGEKPF 63
Query: 289 KCPLCDRCFGQQTNLDRHLKKH 310
            C +C R F +     RH K H
Sbjct: 64  ACDICGRKFARSDERKRHTKIH 85

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 39/81 (48%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 226 KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKE 285
           K K  + CKFCG+ F +S NL  H RTHT E+PY C  C ++F    +L+ H R IH+KE
Sbjct: 13  KTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDH-RYIHSKE 71
Query: 286 KPFKCPLCDRCFGQQTNLDRH 306
           KPFKC  C + F Q   L  H
Sbjct: 72  KPFKCQECGKGFCQSRTLAVH 92

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 75.9 bits (185), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
Query: 236 CGKVFPRSANLTRHLRTHTGEQPYKCKY--CERSFSISSNLQRHVRNIHNKEKPFKCPLC 293
           C KV+ +S++L  HLRTHTGE+PYKC +  C+  F+ S  L RH R  H   KPF+C +C
Sbjct: 23  CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRK-HTGAKPFQCGVC 81
Query: 294 DRCFGQQTNLDRHLKKHE 311
           +R F +  +L  H+K+H+
Sbjct: 82  NRSFSRSDHLALHMKRHQ 99

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 75.9 bits (185), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 38/82 (46%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
Query: 231 YAC--KFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPF 288
           YAC  + C + F RS  LTRH+R HTG++P++C+ C R+FS S +L  H+R  H  EKPF
Sbjct: 5   YACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRT-HTGEKPF 63
Query: 289 KCPLCDRCFGQQTNLDRHLKKH 310
            C +C R F +     RH K H
Sbjct: 64  ACDICGRKFARSDERKRHTKIH 85

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 75.9 bits (185), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 38/82 (46%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
Query: 231 YAC--KFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPF 288
           YAC  + C + F RS  LTRH+R HTG++P++C+ C R+FS S +L  H+R  H  EKPF
Sbjct: 4   YACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRT-HTGEKPF 62
Query: 289 KCPLCDRCFGQQTNLDRHLKKH 310
            C +C R F +     RH K H
Sbjct: 63  ACDICGRKFARSDERKRHTKIH 84

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 75.5 bits (184), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 38/82 (46%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
Query: 231 YAC--KFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPF 288
           YAC  + C + F RS  LTRH+R HTG++P++C+ C R+FS S +L  H+R  H  EKPF
Sbjct: 5   YACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRT-HTGEKPF 63
Query: 289 KCPLCDRCFGQQTNLDRHLKKH 310
            C +C R F +     RH K H
Sbjct: 64  ACDICGRKFARSDERKRHTKIH 85

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 75.1 bits (183), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 3/82 (3%)
Query: 231 YAC--KFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPF 288
           YAC  + C + F +S +LTRH+R HTG++P++C+ C R+FS S +L  H+R  H  EKPF
Sbjct: 5   YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRT-HTGEKPF 63
Query: 289 KCPLCDRCFGQQTNLDRHLKKH 310
            C +C R F +     RH K H
Sbjct: 64  ACDICGRKFARSDERKRHTKIH 85

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 75.1 bits (183), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 35/77 (45%), Positives = 48/77 (62%), Gaps = 3/77 (3%)
Query: 236 CGKVFPRSANLTRHLRTHTGEQPYKCKY--CERSFSISSNLQRHVRNIHNKEKPFKCPLC 293
           CGK + +S++L  HLRTHTGE+PY C +  C   F+ S  L RH R  H   +PF+C  C
Sbjct: 14  CGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRK-HTGHRPFQCQKC 72
Query: 294 DRCFGQQTNLDRHLKKH 310
           DR F +  +L  H+K+H
Sbjct: 73  DRAFSRSDHLALHMKRH 89

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 75.1 bits (183), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 35/77 (45%), Positives = 48/77 (62%), Gaps = 3/77 (3%)
Query: 236 CGKVFPRSANLTRHLRTHTGEQPYKCKY--CERSFSISSNLQRHVRNIHNKEKPFKCPLC 293
           CGK + +S++L  HLRTHTGE+PY C +  C   F+ S  L RH R  H   +PF+C  C
Sbjct: 13  CGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRK-HTGHRPFQCQKC 71
Query: 294 DRCFGQQTNLDRHLKKH 310
           DR F +  +L  H+K+H
Sbjct: 72  DRAFSRSDHLALHMKRH 88

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 231 YACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
           + CK CGK F RS+ L+ HL  H+  +PY C+YC + F   S++++H   IH  EKP KC
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHT-FIHTGEKPHKC 60
Query: 291 PLCDRCFGQQTNLDRHLKKHEA 312
            +C + F Q +NL  H +KH  
Sbjct: 61  QVCGKAFSQSSNLITHSRKHTG 82

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 71.6 bits (174), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 36/84 (42%), Positives = 51/84 (60%), Gaps = 5/84 (5%)
Query: 231 YACKFCGKVFPRSANLTRHLRTHTGEQPYKCKY--CERSFSISSNLQRHVRNIHNKEKPF 288
           + C  CGK F  S+ L RH   HTGE+P++C +  C + FS+  NL+ HVR IH  ++P+
Sbjct: 35  HVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVR-IHTGDRPY 93
Query: 289 KCPL--CDRCFGQQTNLDRHLKKH 310
            CP   C++ F Q TNL  H+  H
Sbjct: 94  VCPFDGCNKKFAQSTNLKSHILTH 117

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 49/82 (59%), Gaps = 3/82 (3%)
Query: 231 YAC--KFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPF 288
           YAC  + C + F +  NL  H+R HTG++P++C+ C R+FS  + L +H+R  H  EKPF
Sbjct: 5   YACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQHTGLNQHIRT-HTGEKPF 63
Query: 289 KCPLCDRCFGQQTNLDRHLKKH 310
            C +C R F      DRH K H
Sbjct: 64  ACDICGRKFATLHTRDRHTKIH 85

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 68.2 bits (165), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
Query: 231 YAC--KFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPF 288
           YAC  + C + F +  NL  H+R HTG++P++C+ C R+FS  ++L  H+R  H  EKPF
Sbjct: 5   YACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQQASLNAHIRT-HTGEKPF 63
Query: 289 KCPLCDRCFGQQTNLDRHLKKH 310
            C +C R F       RH K H
Sbjct: 64  ACDICGRKFATLHTRTRHTKIH 85

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/84 (45%), Positives = 47/84 (55%), Gaps = 5/84 (5%)
Query: 231 YACKF--CGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPF 288
           Y C F  C + F RS  L RH R HTG +P++CK C+R FS S +L+ H R  H  EKPF
Sbjct: 37  YQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTR-THTGEKPF 95
Query: 289 KC--PLCDRCFGQQTNLDRHLKKH 310
            C  P C + F +   L RH   H
Sbjct: 96  SCRWPSCQKKFARSDELVRHHNMH 119

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 48/86 (55%), Gaps = 7/86 (8%)
Query: 237 GKVFPRSANLTRHLRTHTGEQPYKCKY--CERSFSISSNLQRHVRNIHNKEKPFKCPL-- 292
           GK F     L  H+R HTGE+P+ C +  C + F+ S NL+ H R  H  EKPFKC    
Sbjct: 69  GKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRT-HTGEKPFKCEFEG 127
Query: 293 CDRCFGQQTNLDRHLKKHEAD--GPT 316
           CDR F   ++  +H+  H +D  GP+
Sbjct: 128 CDRRFANSSDRKKHMHVHTSDKSGPS 153

>pdb|1X6E|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Zinc Finger Protein 24 Length = 72

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/53 (52%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 231 YACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHN 283
           Y C  CGK F RS+ L +H R HTGE+PYKC  C ++FS +S L  H R IH 
Sbjct: 15  YGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQR-IHT 66

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 226 KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKE 285
           + + RY C  CGK F  S++L++H RTHTGE+PYKC  C ++F   S+L  H R +H   
Sbjct: 14  RERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHR-VHTGS 72
Query: 286 KP 287
            P
Sbjct: 73  GP 74

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 259 YKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPT 316
           YKC  C +SFS SS+L +H R  H  EKP+KC  C + F Q+++L  H + H   GP+
Sbjct: 19  YKCDECGKSFSHSSDLSKH-RRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPS 75

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 51/84 (60%), Gaps = 6/84 (7%)
Query: 231 YACKF--CGKVFPRSANLTRHLRTHTGEQPYKCKY--CERSFSISSNLQRHVRNIHNKEK 286
           + C F  C K + R  NL  HLR+HTGE+PY C++  C ++FS +S+  +H    H+ EK
Sbjct: 68  HKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEK 127
Query: 287 PFKCPL--CDRCFGQQTNLDRHLK 308
           P+ C L  C + +   ++L +H+K
Sbjct: 128 PYVCKLPGCTKRYTDPSSLRKHVK 151

>pdb|1F2I|G Chain G, Cocrystal Structure Of Selected Zinc Finger Dimer Bound To Dna Length = 73

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Query: 223 NTGKPKDR-YAC--KFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVR 279
           N   PK R YAC  + C + F RS  LTRH+R HTG++P++C+ C R+FS S +L  H+R
Sbjct: 11  NYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIR 70

>pdb|1F2I|G Chain G, Cocrystal Structure Of Selected Zinc Finger Dimer Bound To Dna Length = 73

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 257 QPYKC--KYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
           +PY C  + C+R FS S  L RH+R IH  +KPF+C +C R F +  +L  H++ H
Sbjct: 18  RPYACPVESCDRRFSRSDELTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72

>pdb|1TF3|A Chain A, Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures Length = 92

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 230 RYACKF--CGKVFPRSANLTRHLRTHTGEQPYKCKY--CERSFSISSNLQRHVRNIHNKE 285
           RY C F  CG  + ++  L  HL  HTGE+P+ CK   CE+ F+   +L RH    H  E
Sbjct: 3   RYICSFADCGAAYNKNWKLQAHLSKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLT-HTGE 61
Query: 286 KPFKCPL--CDRCFGQQTNLDRHLKK 309
           K F C    CD  F  + N+ +H  +
Sbjct: 62  KNFTCDSDGCDLRFTTKANMKKHFNR 87

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 232 ACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKE--KPFK 289
           AC+ CGK+F    +L RH  +H+GE+PY C  C   F     +  HVR+ H+    KP+ 
Sbjct: 9   ACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRS-HDGSVGKPYI 67
Query: 290 CPLCDRCFGQQTNLDRHLKK 309
           C  C + F +  +L+ H+K+
Sbjct: 68  CQSCGKGFSRPDHLNGHIKQ 87

>pdb|1LLM|C Chain C, Crystal Structure Of A Zif23-Gcn4 Chimera Bound To Dna Length = 88

Iteration: 1
 Score = 54.7 bits (130), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 231 YACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRH 277
           + C+ C + F RS +LT H+RTHTGE+P+ C  C R F+ S   +RH
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH 50

>pdb|3UK3|C Chain C, Crystal Structure Of Znf217 Bound To Dna Length = 57

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 233 CKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIH 282
           C +CGK F  +  L  HLRTHTGE+PYKC++CE + +  ++L+ H+   H
Sbjct: 7   CSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHH 56

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 222 NNTGKPKDR-YACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRN 280
            ++G   D+ Y C+ CGK F   +   RH+  H G +PY C  C + F +  +L  H++ 
Sbjct: 1   GSSGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK- 58
Query: 281 IHNKEKPFKCPLCDRCFGQQTNLDRHL 307
           IH   KP++C +C + F  + +  RH+
Sbjct: 59  IHTGIKPYECNICAKRFMWRDSFHRHV 85

>pdb|2CT1|A Chain A, Solution Structure Of The Zinc Finger Domain Of Transcriptional Repressor Ctcf Protein Length = 77

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 251 RTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKE-KPFKCPLCDRCFGQQTNLDRHLKK 309
           RTH+GE+PY+C  C   F+ S  ++ H+   H +    F CP CD    ++++L  HL+K
Sbjct: 8   RTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRK 67
Query: 310 -HEADGPT 316
            H   GP+
Sbjct: 68  QHSYSGPS 75

>pdb|2ADR|A Chain A, Adr1 Dna-Binding Domain From Saccharomyces Cerevisiae, Nmr, 25 Structures Length = 60

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 231 YACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHN 283
           + C+ C + F R  +L RH R+HT E+PY C  C R+F+    L RH + IH+
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHS 55

>pdb|2EPA|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domains From Human Krueppel-Like Factor 10 Length = 72

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 236 CGKVFPRSANLTRHLRTHTGEQPYKCKY--CERSFSISSNLQRHVRN 280
           CGK + +S++L  H RTHTGE+P+ C +  CER F+ S  L RH R 
Sbjct: 25  CGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRT 71

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 231 YACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKP 287
           Y C  C   F    NL  H   HTGE+PY+C  C   F+  +NL+ H R IH+ EKP
Sbjct: 18  YKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTR-IHSGEKP 73

>pdb|1TF6|A Chain A, Co-crystal Structure Of Xenopus Tfiiia Zinc Finger Domain Bound To The 5s Ribosomal Rna Gene Internal Control Region Length = 190

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 230 RYACKF--CGKVFPRSANLTRHLRTHTGEQPYKCKY--CERSFSISSNLQRHVRNIHNKE 285
           RY C F  CG  + ++  L  HL  HTGE+P+ CK   CE+ F+   +L RH    H  E
Sbjct: 12  RYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLT-HTGE 70
Query: 286 KPFKCPL--CDRCFGQQTNLDRHL 307
           K F C    CD  F  + N+ +H 
Sbjct: 71  KNFTCDSDGCDLRFTTKANMKKHF 94

>pdb|4GZN|C Chain C, Mouse Zfp57 Zinc Fingers In Complex With Methylated Dna Length = 60

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 256 EQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHE 311
           E+P+ C +C +++  +S L RH R  H   +P  CP C +CF  Q+ ++RHLK H+
Sbjct: 2   ERPFFCNFCGKTYRDASGLSRH-RRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQ 56

>pdb|2LT7|A Chain A, Solution Nmr Structure Of Kaiso Zinc Finger Dna Binding Domain In Complex With Kaiso Binding Site Dna Length = 133

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 223 NTGKPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIH 282
           N    + +Y C++C KVFP +   T+H   HTGE+ Y+C  C +SF     +  H++++H
Sbjct: 43  NIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMSSHIKSVH 102
Query: 283 NKE 285
           +++
Sbjct: 103 SQD 105

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 222 NNTGKPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNI 281
           N   + +  + C  C + F R   L  H+ +HTGE PYKC  C + F    +LQ H+  +
Sbjct: 58  NCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKL 117
Query: 282 HN 283
           H+
Sbjct: 118 HS 119

>pdb|1BBO|A Chain A, High-Resolution Solution Structure Of The Double Cys2His2 Zinc Finger From The Human Enhancer Binding Protein Mbp-1 Length = 57

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 230 RYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRN 280
           +Y C+ CG    + + L +H+RTHT  +PY C YC  SF    NL +H+++
Sbjct: 1   KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKS 51

>pdb|1X6H|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Transcriptional Repressor Ctcf Length = 86

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Query: 251 RTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKE---KPFKCPLCDRCFGQQTNLDRHL 307
           RTHTGE+PY C +C+++F     L  H +  H+       F C  C + F ++  + RH 
Sbjct: 8   RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHA 67
Query: 308 KKHEADGPTILDDRNGG 324
                 GP  ++  N G
Sbjct: 68  D--NCAGPDGVEGENSG 82

>pdb|2DRP|A Chain A, The Crystal Structure Of A Two Zinc-Finger Peptide Reveals An Extension To The Rules For Zinc-FingerDNA RECOGNITION Length = 66

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 252 THTGEQPYKCKYCERSFSISSNLQRHVRNIHNKE-KPFKCPLCDRCFGQQTNLDRHLK 308
           T  GE  Y+CK C R ++  SN  RH    H +  K + CP C + F ++ N+  H+K
Sbjct: 4   TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVK 61

>pdb|2EME|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 725- 757) Of Human Zinc Finger Protein 473 Length = 46

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 17/28 (60%), Positives = 19/28 (67%)
Query: 231 YACKFCGKVFPRSANLTRHLRTHTGEQP 258
           Y C +CGK F  SA L RH R HTGE+P
Sbjct: 13  YVCDYCGKAFGLSAELVRHQRIHTGEKP 40

>pdb|2J7J|A Chain A, Invariance Of The Zinc Finger Module: A Comparison Of The Free Structure With Those In Nucleic-Acid Complexes Length = 85

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
Query: 231 YACKF--CGKVFPRSANLTRHLRTHTGEQPYKCKY--CERSFSISSNLQRH 277
           Y C F  CGK F +   L  H  +HT + PY+C +  C++ FS+ S L+RH
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRH 52

>pdb|1UN6|B Chain B, The Crystal Structure Of A Zinc Finger - Rna Complex Reveals Two Modes Of Molecular Recognition Length = 87

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
Query: 231 YACKF--CGKVFPRSANLTRHLRTHTGEQPYKCKY--CERSFSISSNLQRH 277
           Y C F  CGK F +   L  H  +HT + PY+C +  C++ FS+ S L+RH
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRH 52

>pdb|2EMA|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 312- 344) Of Human Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 230 RYACKFCGKVFPRSANLTRHLRTHTGEQP 258
           RY C  CGKVF R++ L++H + HTGE+P
Sbjct: 12  RYKCNECGKVFSRNSQLSQHQKIHTGEKP 40

>pdb|2EPR|A Chain A, Solution Structure Of The Secound Zinc Finger Domain Of Zinc Finger Protein 278 Length = 48

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 16/39 (41%), Positives = 27/39 (69%)
Query: 221 SNNTGKPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPY 259
           S ++G+ + + AC+ CGK+F    +L RH  +H+GE+PY
Sbjct: 3   SGSSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPY 41

>pdb|2YRJ|A Chain A, Solution Structure Of The C2h2-Type Zinc Finger Domain (781- 813) From Zinc Finger Protein 473 Length = 46

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 17/28 (60%), Positives = 20/28 (71%)
Query: 231 YACKFCGKVFPRSANLTRHLRTHTGEQP 258
           Y C  CGK F + ANLT+H R HTGE+P
Sbjct: 13  YRCGECGKAFAQKANLTQHQRIHTGEKP 40

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	447
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-33
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-26
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-20
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-32
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	3e-23
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	6e-16
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	3e-32
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	6e-19
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	5e-17
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	8e-32
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	7e-20
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	3e-15
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	3e-31
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	1e-07
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	3e-31
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	1e-25
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	3e-23
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	6e-31
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	3e-22
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	3e-19
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	7e-31
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-28
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-21
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	7e-19
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	3e-04
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	1e-30
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-16
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	1e-30
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-30
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-30
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	5e-30
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-29
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	7e-24
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	5e-08
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	5e-08
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	8e-30
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	6e-26
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-22
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-12
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	3e-29
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	2e-18
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	3e-29
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	4e-25
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	9e-25
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-12
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-05
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	4e-29
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	2e-25
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	2e-24
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-18
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	3e-16
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	1e-28
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-21
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	5e-28
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	3e-24
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	5e-27
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-26
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	5e-18
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	1e-26
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	6e-20
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	5e-26
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	8e-26
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	1e-23
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-18
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	3e-06
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	8e-26
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	2e-21
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	7e-15
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	2e-24
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	5e-23
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	7e-24
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	5e-23
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	2e-23
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	2e-23
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	2e-23
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	1e-21
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	3e-23
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	5e-18
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	6e-04
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	6e-20
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	8e-20
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	3e-19
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	3e-17
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	9e-06
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	2e-18
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	1e-15
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	3e-05
2epa_A	72	Krueppel-like factor 10; transforming growth facto	5e-17
2epa_A	72	Krueppel-like factor 10; transforming growth facto	1e-15
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-16
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	9e-11
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-16
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-12
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-05
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-16
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-12
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-05
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-16
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-12
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-04
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-16
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-12
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-04
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-16
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-12
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-05
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-16
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-12
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-05
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	8e-16
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-12
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-05
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	8e-16
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	6e-13
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	4e-05
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-16
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-12
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-04
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	9e-16
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	7e-11
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	9e-16
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-12
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-04
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	9e-16
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-12
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	5e-05
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-16
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-12
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-05
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-15
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-12
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-04
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-15
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-12
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	9e-05
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-15
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-12
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-05
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-15
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-12
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-04
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-15
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-11
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	7e-04
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-15
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-12
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-05
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-15
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-12
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-05
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-15
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-12
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-05
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-15
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-12
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-15
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-12
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-04
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-15
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-12
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-04
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-15
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-12
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-04
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-15
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-12
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-04
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-15
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-12
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-04
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-15
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-12
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-05
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-15
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-12
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-05
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-15
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-12
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-05
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-15
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-12
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-04
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-15
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-12
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-05
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	2e-15
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	3e-12
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	9e-05
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-15
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	6e-12
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	6e-04
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-15
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-12
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-05
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-15
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-12
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-05
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-15
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-11
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-04
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-15
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-12
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-04
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-15
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-12
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-04
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-15
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-12
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-04
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-15
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-12
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	3e-15
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	3e-12
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-15
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-12
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-04
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	4e-15
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-12
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	4e-04
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	4e-15
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	5e-12
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	3e-04
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-15
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-13
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-05
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-15
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-12
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	4e-15
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-12
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	5e-05
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	5e-15
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	2e-11
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	2e-05
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	5e-15
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-11
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-05
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-15
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-12
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-04
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	6e-15
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	9e-11
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-04
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	6e-15
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	9e-12
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-04
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-15
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-11
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-04
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-15
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-12
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-05
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-15
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-12
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-15
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-12
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-04
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-15
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-11
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-05
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-15
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-12
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-04
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	8e-15
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	5e-12
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	3e-04
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	8e-15
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	9e-13
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-05
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	8e-15
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	3e-12
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-04
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-14
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-12
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-14
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-12
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-04
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-14
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-11
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-04
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-14
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-12
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-04
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-14
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-12
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-04
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-14
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-12
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-05
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-14
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-12
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-04
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-14
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-11
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-04
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-14
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-11
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	2e-14
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	6e-11
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	7e-04
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-14
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-12
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-04
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	3e-14
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	1e-10
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	1e-08
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-14
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-12
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-14
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-12
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-04
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	4e-14
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	9e-11
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-04
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	5e-14
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	7e-11
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	6e-05
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-14
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-11
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	9e-05
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	5e-14
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	5e-12
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	8e-04
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-14
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-10
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-05
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	1e-13
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	9e-11
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	2e-08
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	1e-13
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	2e-11
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	8e-04
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-13
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-10
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-04
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	7e-13
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	2e-09
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	1e-04
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	1e-12
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	5e-12
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-12
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-11
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-12
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	8e-12
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-04
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	5e-12
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	7e-10
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	9e-05
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	5e-12
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	3e-10
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	1e-04
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	7e-12
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	1e-06
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	2e-05
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-11
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-08
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	3e-11
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	4e-10
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	3e-10
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	2e-06
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	4e-06
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	3e-10
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	4e-08
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	7e-04
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	5e-10
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	4e-08
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	1e-09
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	1e-06
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	7e-05
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	1e-09
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	5e-08
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	4e-08
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	2e-04
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	1e-07
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	5e-06
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	2e-05
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	5e-07
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	2e-06
1ard_A	29	Yeast transcription factor ADR1; transcription reg	8e-07
1ard_A	29	Yeast transcription factor ADR1; transcription reg	7e-05
1ard_A	29	Yeast transcription factor ADR1; transcription reg	3e-04
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	6e-06
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	2e-04
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	4e-04
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	4e-04
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	4e-04
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	5e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-04
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	6e-04
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	6e-04
1paa_A	30	Yeast transcription factor ADR1; transcription reg	7e-04
1ej6_B	1275	Lambda1; icosahedral, non-equivalence, dsRNA virus	7e-04
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	7e-04
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	8e-04

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score =  120 bits (304), Expect = 1e-33
 Identities = 36/88 (40%), Positives = 51/88 (57%), Gaps = 5/88 (5%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIH 282
               P   + C+ CGK F R   L  H+R HTG +PYKCK C+ + + SS+L +H+R IH
Sbjct: 4   GSSGP---HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLR-IH 59

Query: 283 NKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
           + E+PFKC +C       + L  HL+ H
Sbjct: 60  SDERPFKCQICPYASRNSSQLTVHLRSH 87

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score =  101 bits (255), Expect = 1e-26
 Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 5/68 (7%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIH 282
           TG KP   Y CK C      S++L +HLR H+ E+P+KC+ C  +   SS L  H+R  H
Sbjct: 32  TGVKP---YKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLR-SH 87

Query: 283 NKEKPFKC 290
             +     
Sbjct: 88  TGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 85.6 bits (213), Expect = 1e-20
 Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 1/59 (1%)

Query: 252 THTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
           +     P+KC+ C + FS    L+ H+R  H   KP+KC  CD      ++L++HL+ H
Sbjct: 2   SSGSSGPHKCEVCGKCFSRKDKLKTHMR-CHTGVKPYKCKTCDYAAADSSSLNKHLRIH 59

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score =  117 bits (295), Expect = 2e-32
 Identities = 38/87 (43%), Positives = 53/87 (60%), Gaps = 6/87 (6%)

Query: 226 KPKDRYACKF--CGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHN 283
           +P   YAC    C + F +S +LTRH+R HTG++P++C+ C R+FS S +L  H+R  H 
Sbjct: 3   RP---YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIR-THT 58

Query: 284 KEKPFKCPLCDRCFGQQTNLDRHLKKH 310
            EKPF C +C R F +     RH K H
Sbjct: 59  GEKPFACDICGRKFARSDERKRHTKIH 85

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 92.5 bits (231), Expect = 3e-23
 Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 11/80 (13%)

Query: 214 KQFQESISNN------TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCER 266
           ++F +S S        TG KP   + C+ C + F RS +LT H+RTHTGE+P+ C  C R
Sbjct: 14  RRFSQSGSLTRHIRIHTGQKP---FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGR 70

Query: 267 SFSISSNLQRHVRNIHNKEK 286
            F+ S   +RH + IH ++K
Sbjct: 71  KFARSDERKRHTK-IHLRQK 89

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 71.7 bits (177), Expect = 6e-16
 Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 3/57 (5%)

Query: 256 EQPYKCKY--CERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
           E+PY C    C+R FS S +L RH+R IH  +KPF+C +C R F +  +L  H++ H
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHIRTH 57

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score =  116 bits (294), Expect = 3e-32
 Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 5/81 (6%)

Query: 226 KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKE 285
           KP   + C+ C + F RS +LT H+RTHTGE+P+ C  C R F+ S   +RH   I +  
Sbjct: 2   KP---FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRD-IQH-I 56

Query: 286 KPFKCPLCDRCFGQQTNLDRH 306
            P      +    +  +L+  
Sbjct: 57  LPILEDKVEELLSKNYHLENE 77

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 80.2 bits (199), Expect = 6e-19
 Identities = 19/66 (28%), Positives = 25/66 (37%), Gaps = 7/66 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRN-- 280
           TG KP   +AC  CG+ F RS    RH        P      E   S + +L+  V    
Sbjct: 27  TGEKP---FACDICGRKFARSDERKRHRDIQH-ILPILEDKVEELLSKNYHLENEVARLK 82

Query: 281 IHNKEK 286
               E+
Sbjct: 83  KLVGER 88

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 74.8 bits (185), Expect = 5e-17
 Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 1/53 (1%)

Query: 258 PYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
           P++C+ C R+FS S +L  H+R  H  EKPF C +C R F +     RH    
Sbjct: 3   PFQCRICMRNFSRSDHLTTHIR-THTGEKPFACDICGRKFARSDERKRHRDIQ 54

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score =  115 bits (291), Expect = 8e-32
 Identities = 35/83 (42%), Positives = 48/83 (57%), Gaps = 3/83 (3%)

Query: 230 RYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKY--CERSFSISSNLQRHVRNIHNKEKP 287
                 CGK + +S++L  HLRTHTGE+PY C +  C   F+ S  L RH R  H   +P
Sbjct: 7   TCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYR-KHTGHRP 65

Query: 288 FKCPLCDRCFGQQTNLDRHLKKH 310
           F+C  CDR F +  +L  H+K+H
Sbjct: 66  FQCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 83.0 bits (206), Expect = 7e-20
 Identities = 29/62 (46%), Positives = 38/62 (61%), Gaps = 7/62 (11%)

Query: 224 TG-KPKDRYACK--FCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRN 280
           TG KP   Y C    CG  F RS  LTRH R HTG +P++C+ C+R+FS S +L  H++ 
Sbjct: 31  TGEKP---YHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMK- 86

Query: 281 IH 282
            H
Sbjct: 87  RH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 69.9 bits (172), Expect = 3e-15
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 3/60 (5%)

Query: 253 HTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC--PLCDRCFGQQTNLDRHLKKH 310
            T         C ++++ SS+L+ H+R  H  EKP+ C    C   F +   L RH +KH
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLR-THTGEKPYHCDWDGCGWKFARSDELTRHYRKH 60

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score =  114 bits (287), Expect = 3e-31
 Identities = 35/80 (43%), Positives = 50/80 (62%), Gaps = 1/80 (1%)

Query: 231 YACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
           + CK CGK F RS+ L+ HL  H+  +PY C+YC + F   S++++H   IH  EKP KC
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTF-IHTGEKPHKC 60

Query: 291 PLCDRCFGQQTNLDRHLKKH 310
            +C + F Q +NL  H +KH
Sbjct: 61  QVCGKAFSQSSNLITHSRKH 80

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 48.2 bits (116), Expect = 1e-07
 Identities = 17/33 (51%), Positives = 21/33 (63%), Gaps = 4/33 (12%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTG 255
           TG KP   + C+ CGK F +S+NL  H R HTG
Sbjct: 53  TGEKP---HKCQVCGKAFSQSSNLITHSRKHTG 82

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score =  114 bits (289), Expect = 3e-31
 Identities = 38/88 (43%), Positives = 48/88 (54%), Gaps = 5/88 (5%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIH 282
              K    + CKFCG+ F +S NL  H RTHT E+PY C  C ++F    +L+ H   IH
Sbjct: 13  KTKKE---FICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRY-IH 68

Query: 283 NKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
           +KEKPFKC  C + F Q   L  H   H
Sbjct: 69  SKEKPFKCQECGKGFCQSRTLAVHKTLH 96

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 99.8 bits (250), Expect = 1e-25
 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 5/68 (7%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIH 282
           T  +P   Y C  C K F R  +L  H   H+ E+P+KC+ C + F  S  L  H   +H
Sbjct: 41  TDERP---YTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKT-LH 96

Query: 283 NKEKPFKC 290
            +      
Sbjct: 97  MQTSSPTA 104

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 92.9 bits (232), Expect = 3e-23
 Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 1/68 (1%)

Query: 243 SANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTN 302
           S+  +        ++ + CK+C R F+ S NL  H R  H  E+P+ C +C + F +Q +
Sbjct: 2   SSGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHER-THTDERPYTCDICHKAFRRQDH 60

Query: 303 LDRHLKKH 310
           L  H   H
Sbjct: 61  LRDHRYIH 68

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score =  113 bits (285), Expect = 6e-31
 Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 7/89 (7%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIH 282
           +G       AC+ CGK+F    +L RH  +H+GE+PY C  C   F     +  HVR  H
Sbjct: 3   SGSSG---VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVR-SH 58

Query: 283 NKE--KPFKCPLCDRCFGQQTNLDRHLKK 309
           +    KP+ C  C + F +  +L+ H+K+
Sbjct: 59  DGSVGKPYICQSCGKGFSRPDHLNGHIKQ 87

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 89.9 bits (224), Expect = 3e-22
 Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 6/66 (9%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQ--PYKCKYCERSFSISSNLQRHVRN 280
           +G KP   Y+C  CG  F R   ++ H+R+H G    PY C+ C + FS   +L  H++ 
Sbjct: 31  SGEKP---YSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQ 87

Query: 281 IHNKEK 286
           +H+   
Sbjct: 88  VHSGPS 93

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 81.4 bits (202), Expect = 3e-19
 Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 1/58 (1%)

Query: 253 HTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
            +G     C+ C + F    +L RH    H+ EKP+ CP+C   F ++  +  H++ H
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRHKL-SHSGEKPYSCPVCGLRFKRKDRMSYHVRSH 58

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score =  114 bits (288), Expect = 7e-31
 Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 6/90 (6%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRN-- 280
           +G        C  C K F     L  H R HTGE+P++C  C + +    NL  H     
Sbjct: 3   SGSSG---VECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNC 59

Query: 281 IHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
           ++  E+ F C +C   F ++  L  H+  H
Sbjct: 60  MNRSEQVFTCSVCQETFRRRMELRLHMVSH 89

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score =  108 bits (272), Expect = 1e-28
 Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 8/87 (9%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLR---THTGEQPYKCKYCERSFSISSNLQRHVR 279
           TG KP   + C  CGK + R  NL  H      +  EQ + C  C+ +F     L+ H+ 
Sbjct: 31  TGEKP---FECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMV 87

Query: 280 NIHNKEKPFKCPLCDRCFGQQTNLDRH 306
             H  E P+KC  C + F Q+ +L  H
Sbjct: 88  -SHTGEMPYKCSSCSQQFMQKKDLQSH 113

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 88.3 bits (220), Expect = 2e-21
 Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 4/64 (6%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIH 282
              +    + C  C + F R   L  H+ +HTGE PYKC  C + F    +LQ H+  +H
Sbjct: 62  RSEQV---FTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLH 118

Query: 283 NKEK 286
           +   
Sbjct: 119 SGPS 122

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 81.4 bits (202), Expect = 7e-19
 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 1/54 (1%)

Query: 253 HTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRH 306
            +G    +C  C + F     L+ H R  H  EKPF+CP C +C+ ++ NL  H
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYLKVHNR-KHTGEKPFECPKCGKCYFRKENLLEH 54

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 39.4 bits (93), Expect = 3e-04
 Identities = 8/29 (27%), Positives = 13/29 (44%)

Query: 282 HNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
            +     +CP C + F  +  L  H +KH
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYLKVHNRKH 30

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score =  113 bits (284), Expect = 1e-30
 Identities = 38/95 (40%), Positives = 58/95 (61%), Gaps = 5/95 (5%)

Query: 221 SNNTGKPKDRYACKF--CGKVFPRSANLTRHLRTHTGEQPYKCKY--CERSFSISSNLQR 276
           S    + +  + C +  C KV+ +S++L  HLRTHTGE+PYKC +  C+  F+ S  L R
Sbjct: 6   SGPDLEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTR 65

Query: 277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHE 311
           H R  H   KPF+C +C+R F +  +L  H+K+H+
Sbjct: 66  HYR-KHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 73.4 bits (181), Expect = 2e-16
 Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 7/73 (9%)

Query: 240 FPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC--PLCDRCF 297
              S       R H  + P     C + ++ SS+L+ H+R  H  EKP+KC    CD  F
Sbjct: 3   SGSSGPDLEKRRIHYCDYP----GCTKVYTKSSHLKAHLR-THTGEKPYKCTWEGCDWRF 57

Query: 298 GQQTNLDRHLKKH 310
            +   L RH +KH
Sbjct: 58  ARSDELTRHYRKH 70

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score =  113 bits (285), Expect = 1e-30
 Identities = 41/92 (44%), Positives = 50/92 (54%), Gaps = 9/92 (9%)

Query: 224 TG-KPKDRYACKF--CGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRN 280
           TG KP   Y C F  C + F RS  L RH R HTG +P++CK C+R FS S +L+ H R 
Sbjct: 32  TGEKP---YQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTR- 87

Query: 281 IHNKEKPFKCPL--CDRCFGQQTNLDRHLKKH 310
            H  EKPF C    C + F +   L RH   H
Sbjct: 88  THTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score =  112 bits (284), Expect = 2e-30
 Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 9/92 (9%)

Query: 224 TG-KPKDRYACK--FCGKVFPRSANLTRHLRTHTGEQPYKCKY--CERSFSISSNLQRHV 278
           +  +P   + C    C K + + ++L  H R HTGE+PY+C +  CER FS S  L+RH 
Sbjct: 2   SEKRP---FMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQ 58

Query: 279 RNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
           R  H   KPF+C  C R F +  +L  H + H
Sbjct: 59  R-RHTGVKPFQCKTCQRKFSRSDHLKTHTRTH 89

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  114 bits (288), Expect = 3e-30
 Identities = 46/88 (52%), Positives = 54/88 (61%), Gaps = 5/88 (5%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIH 282
            G KP   YAC  CGK F RS +L  H RTHTGE+PYKC  C +SFS   +L RH R  H
Sbjct: 17  PGEKP---YACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQR-TH 72

Query: 283 NKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
             EKP+KCP C + F Q+ NL  H + H
Sbjct: 73  TGEKPYKCPECGKSFSQRANLRAHQRTH 100

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  114 bits (287), Expect = 5e-30
 Identities = 43/88 (48%), Positives = 54/88 (61%), Gaps = 5/88 (5%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIH 282
           TG KP   Y C  CGK F + ANL  H RTHTGE+PY C  C +SFS  ++L+ H R  H
Sbjct: 73  TGEKP---YKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQR-TH 128

Query: 283 NKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
             EKP+KCP C + F ++ NL  H + H
Sbjct: 129 TGEKPYKCPECGKSFSREDNLHTHQRTH 156

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  112 bits (282), Expect = 3e-29
 Identities = 44/88 (50%), Positives = 54/88 (61%), Gaps = 5/88 (5%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIH 282
           TG KP   YAC  CGK F + A+L  H RTHTGE+PYKC  C +SFS   NL  H R  H
Sbjct: 101 TGEKP---YACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQR-TH 156

Query: 283 NKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
             EKP+KCP C + F ++  L+ H + H
Sbjct: 157 TGEKPYKCPECGKSFSRRDALNVHQRTH 184

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 97.1 bits (243), Expect = 7e-24
 Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 1/71 (1%)

Query: 240 FPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQ 299
              S++         GE+PY C  C +SFS S +L  H R  H  EKP+KCP C + F  
Sbjct: 3   EFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQR-THTGEKPYKCPECGKSFSD 61

Query: 300 QTNLDRHLKKH 310
           + +L RH + H
Sbjct: 62  KKDLTRHQRTH 72

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 52.1 bits (126), Expect = 5e-08
 Identities = 18/36 (50%), Positives = 20/36 (55%), Gaps = 4/36 (11%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQP 258
           TG KP   Y C  CGK F R   L  H RTHTG++ 
Sbjct: 157 TGEKP---YKCPECGKSFSRRDALNVHQRTHTGKKT 189

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 51.7 bits (125), Expect = 5e-08
 Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 1/44 (2%)

Query: 267 SFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
           S   SS+       +   EKP+ CP C + F +  +L  H + H
Sbjct: 2   SEFGSSSSVAQAA-LEPGEKPYACPECGKSFSRSDHLAEHQRTH 44

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score =  111 bits (280), Expect = 8e-30
 Identities = 36/89 (40%), Positives = 52/89 (58%), Gaps = 8/89 (8%)

Query: 226 KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKY--CERSFSISSNLQRHVRNIHN 283
           +    + C  CGK F  S+ L RH   HTGE+P++C +  C + FS+  NL+ HVR IH 
Sbjct: 33  RV---HVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVR-IHT 88

Query: 284 KEKPFKCPL--CDRCFGQQTNLDRHLKKH 310
            ++P+ CP   C++ F Q TNL  H+  H
Sbjct: 89  GDRPYVCPFDGCNKKFAQSTNLKSHILTH 117

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score =  101 bits (253), Expect = 6e-26
 Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 9/89 (10%)

Query: 226 KPKDRYACKF--CGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHN 283
           +     AC    C K+F  ++ + +HL TH G + + C  C ++F  SS L+RH   +H 
Sbjct: 4   RT---IACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQL-VHT 58

Query: 284 KEKPFKCPL--CDRCFGQQTNLDRHLKKH 310
            EKPF+C    C + F    NL  H++ H
Sbjct: 59  GEKPFQCTFEGCGKRFSLDFNLRTHVRIH 87

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 91.4 bits (228), Expect = 2e-22
 Identities = 29/71 (40%), Positives = 40/71 (56%), Gaps = 9/71 (12%)

Query: 224 TG-KPKDRYACKF--CGKVFPRSANLTRHLRTHTGEQPYKCKY--CERSFSISSNLQRHV 278
           TG KP   + C F  CGK F    NL  H+R HTG++PY C +  C + F+ S+NL+ H+
Sbjct: 58  TGEKP---FQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHI 114

Query: 279 RNIHNKEKPFK 289
              H K K  +
Sbjct: 115 L-THAKAKNNQ 124

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 62.9 bits (154), Expect = 2e-12
 Identities = 13/57 (22%), Positives = 25/57 (43%), Gaps = 4/57 (7%)

Query: 256 EQPYKCKY--CERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
            +   C +  C + F  +S +++H+   H   +   C  C + F + + L RH   H
Sbjct: 3   PRTIACPHKGCTKMFRDNSAMRKHLH-THG-PRVHVCAECGKAFVESSKLKRHQLVH 57

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score =  108 bits (273), Expect = 3e-29
 Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 5/83 (6%)

Query: 231 YACKF--CGKVFPRSANLTRHLRTHTGEQPYKCKY--CERSFSISSNLQRHVRNIHNKEK 286
           Y C F  CGK F +   L  H  +HT + PY+C +  C++ FS+ S L+RH + +H    
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEK-VHAGYP 60

Query: 287 PFKCPLCDRCFGQQTNLDRHLKK 309
             K   C       T   +H+ +
Sbjct: 61  CKKDDSCSFVGKTWTLYLKHVAE 83

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 78.8 bits (195), Expect = 2e-18
 Identities = 17/62 (27%), Positives = 21/62 (33%), Gaps = 6/62 (9%)

Query: 224 TG-KPKDRYACKF--CGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRN 280
           T   P   Y C    C K F   + L RH + H G    K   C       +   +HV  
Sbjct: 27  TQQLP---YECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAE 83

Query: 281 IH 282
            H
Sbjct: 84  CH 85

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score =  110 bits (278), Expect = 3e-29
 Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 10/94 (10%)

Query: 224 TG-KPKDRYACKF--CGKVFPRSANLTRHLRTHTGEQPYKCKY--CERSFSISSNLQRHV 278
           TG KP   + C F  C K + R  NL  HLR+HTGE+PY C++  C ++FS +S+  +H 
Sbjct: 63  TGEKP---HKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQ 119

Query: 279 RNIHNKEKPFKC--PLCDRCFGQQTNLDRHLKKH 310
              H+ EKP+ C  P C + +   ++L +H+K  
Sbjct: 120 NRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTV 153

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score =   99 bits (250), Expect = 4e-25
 Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 14/93 (15%)

Query: 224 TG-KPKDRYACKFCG-----KVFPRSANLTRHLRTHTGEQPYKCKY--CERSFSISSNLQ 275
              K    + C + G     + F     L  H+R HTGE+P+KC +  C +S+S   NL+
Sbjct: 30  GERKE---FVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLK 86

Query: 276 RHVRNIHNKEKPFKC--PLCDRCFGQQTNLDRH 306
            H+R  H  EKP+ C    C + F   ++  +H
Sbjct: 87  THLR-SHTGEKPYMCEHEGCSKAFSNASDRAKH 118

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 98.8 bits (247), Expect = 9e-25
 Identities = 23/95 (24%), Positives = 33/95 (34%), Gaps = 14/95 (14%)

Query: 226 KPKDRYACKFCGKVFPRSANLTRHL---RTHTGEQPYKCKYCE-----RSFSISSNLQRH 277
                     C + F     L  H+     H   + + C +       R F     L  H
Sbjct: 2   TD---CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVH 58

Query: 278 VRNIHNKEKPFKCPL--CDRCFGQQTNLDRHLKKH 310
           +R  H  EKP KC    C + + +  NL  HL+ H
Sbjct: 59  MR-RHTGEKPHKCTFEGCRKSYSRLENLKTHLRSH 92

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 64.2 bits (157), Expect = 2e-12
 Identities = 16/62 (25%), Positives = 24/62 (38%), Gaps = 7/62 (11%)

Query: 256 EQPYKCKYCERSFSISSNLQRHVRN--IHNKEKPFKCPLCD-----RCFGQQTNLDRHLK 308
           E   +   C + F     L  H+ +  IH + K F C         R F  Q  L  H++
Sbjct: 1   ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMR 60

Query: 309 KH 310
           +H
Sbjct: 61  RH 62

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 43.7 bits (104), Expect = 2e-05
 Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 6/35 (17%)

Query: 224 TG-KPKDRYACKF--CGKVFPRSANLTRHLRTHTG 255
           +  KP   Y CK   C K +   ++L +H++T  G
Sbjct: 124 SNEKP---YVCKLPGCTKRYTDPSSLRKHVKTVHG 155

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score =  111 bits (281), Expect = 4e-29
 Identities = 32/94 (34%), Positives = 44/94 (46%), Gaps = 11/94 (11%)

Query: 224 TG-KPKDRYACKF--CGKVFPRSANLTRHLRTHTGEQPYKCKY--CERSFSISSNLQRHV 278
              K    Y C F  CG  + ++  L  HL  HTGE+P+ CK   CE+ F+   +L RH 
Sbjct: 8   VVYKR---YICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHS 64

Query: 279 RNIHNKEKPFKC--PLCDRCFGQQTNLDRHLKKH 310
              H  EK F C    CD  F  + N+ +H  + 
Sbjct: 65  L-THTGEKNFTCDSDGCDLRFTTKANMKKHFNRF 97

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score =  101 bits (254), Expect = 2e-25
 Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 13/96 (13%)

Query: 224 TG-KPKDRYACK--FCGKVFPRSANLTRHLRTHTGEQ--PYKCKY--CERSFSISSNLQR 276
           TG K    + C    C   F   AN+ +H       +   Y C +  C ++F   + L+ 
Sbjct: 68  TGEKN---FTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKV 124

Query: 277 HVRNIHNKEKPFKC--PLCDRCFGQQTNLDRHLKKH 310
           H    H ++ P++C    CD+ F   + L RH K H
Sbjct: 125 HQF-SHTQQLPYECPHEGCDKRFSLPSRLKRHEKVH 159

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 98.8 bits (247), Expect = 2e-24
 Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 5/90 (5%)

Query: 224 TGKPKDRYACKF--CGKVFPRSANLTRHLRTHTGEQPYKCK--YCERSFSISSNLQRHVR 279
                  Y C F  CGK F +   L  H  +HT + PY+C    C++ FS+ S L+RH +
Sbjct: 98  HNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEK 157

Query: 280 NIHNKEKPFKCPLCDRCFGQQTNLDRHLKK 309
            +H      K   C       T   +H+ +
Sbjct: 158 -VHAGYPCKKDDSCSFVGKTWTLYLKHVAE 186

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 82.6 bits (205), Expect = 1e-18
 Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 5/66 (7%)

Query: 249 HLRTHTGEQPYKCKY--CERSFSISSNLQRHVRNIHNKEKPFKC--PLCDRCFGQQTNLD 304
                   + Y C +  C  +++ +  LQ H+   H  EKPF C    C++ F    +L 
Sbjct: 3   EKALPVVYKRYICSFADCGAAYNKNWKLQAHLC-KHTGEKPFPCKEEGCEKGFTSLHHLT 61

Query: 305 RHLKKH 310
           RH   H
Sbjct: 62  RHSLTH 67

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 75.7 bits (187), Expect = 3e-16
 Identities = 17/63 (26%), Positives = 21/63 (33%), Gaps = 6/63 (9%)

Query: 224 TG-KPKDRYACK--FCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRN 280
           T   P   Y C    C K F   + L RH + H G    K   C       +   +HV  
Sbjct: 130 TQQLP---YECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAE 186

Query: 281 IHN 283
            H 
Sbjct: 187 CHQ 189

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score =  106 bits (266), Expect = 1e-28
 Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 1/61 (1%)

Query: 251 RTHTGEQPYKCKYCERSFSISSNLQRHVRNI-HNKEKPFKCPLCDRCFGQQTNLDRHLKK 309
            T  GE  Y+CK C R ++  SN  RH         K + CP C + F ++ N+  H+K 
Sbjct: 3   FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKI 62

Query: 310 H 310
            
Sbjct: 63  I 63

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 86.8 bits (216), Expect = 2e-21
 Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 7/64 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRT--HTGEQPYKCKYCERSFSISSNLQRHVRN 280
            G      Y CK C +V+   +N  RH  T      + Y C +C + F+   N+  HV+ 
Sbjct: 6   EGEHT---YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVK- 61

Query: 281 IHNK 284
           I +K
Sbjct: 62  IIHK 65

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score =  104 bits (263), Expect = 5e-28
 Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 3/68 (4%)

Query: 245 NLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKE--KPFKCPLCDRCFGQQTN 302
           +     RTH+GE+PY+C  C   F+ S  ++ H+    + E    F CP CD    ++++
Sbjct: 2   SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHIL-QKHTENVAKFHCPHCDTVIARKSD 60

Query: 303 LDRHLKKH 310
           L  HL+K 
Sbjct: 61  LGVHLRKQ 68

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 94.5 bits (236), Expect = 3e-24
 Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 6/68 (8%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQ--PYKCKYCERSFSISSNLQRHVRN 280
           +G KP   Y C  C   F +S  +  H+     E    + C +C+   +  S+L  H+R 
Sbjct: 11  SGEKP---YECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRK 67

Query: 281 IHNKEKPF 288
            H+   P 
Sbjct: 68  QHSYSGPS 75

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score =  103 bits (259), Expect = 5e-27
 Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 6/84 (7%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIH 282
           +G K    Y C+ CGK F   +   RH+  H G +PY C  C + F +  +L  H++ IH
Sbjct: 6   SGDKL---YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK-IH 60

Query: 283 NKEKPFKCPLCDRCFGQQTNLDRH 306
              KP++C +C + F  + +  RH
Sbjct: 61  TGIKPYECNICAKRFMWRDSFHRH 84

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score =  102 bits (256), Expect = 1e-26
 Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 7/81 (8%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIH 282
            G +P   Y C  CGK F    +L  H++ HTG +PY+C  C + F    +  RH   + 
Sbjct: 33  LGLRP---YGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRH---VT 86

Query: 283 NKEKPFKCPLCDRCFGQQTNL 303
           +  K ++    ++   + +  
Sbjct: 87  SCTKSYEAAKAEQNTTEASGP 107

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 78.3 bits (194), Expect = 5e-18
 Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 2/60 (3%)

Query: 251 RTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
              +G++ Y C+ C +SF+  S   RH+  +H   +P+ C +C + F  + +L  H+K H
Sbjct: 3   SGSSGDKLYPCQ-CGKSFTHKSQRDRHMS-MHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 60

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score =  101 bits (253), Expect = 1e-26
 Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 10/81 (12%)

Query: 224 TG-KPKDRYACKF--CGKVFPRSANLTRHLR-THTGEQPYKCKY--CERSFSISSNLQRH 277
           +G        C F  CG++F     L  H +  H  ++ + C    C +SF+   +L+ H
Sbjct: 3   SGSSG---MPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEH 59

Query: 278 VRNIHNKEKPFKCPLCDRCFG 298
           ++ +H+  + + C       G
Sbjct: 60  MK-LHSDTRDYICEFSGPSSG 79

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 83.0 bits (206), Expect = 6e-20
 Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 4/62 (6%)

Query: 253 HTGEQPYKCKY--CERSFSISSNLQRHVRNIHNKEKPFKCP--LCDRCFGQQTNLDRHLK 308
            +G     C +  C R FS    L  H +  H  +K F CP   C + F  + +L  H+K
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61

Query: 309 KH 310
            H
Sbjct: 62  LH 63

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score =  101 bits (255), Expect = 5e-26
 Identities = 33/82 (40%), Positives = 44/82 (53%), Gaps = 5/82 (6%)

Query: 233 CKFCGKVFPRSANLTRHLRTHTGEQPYKCKY--CERSFSISSNLQRHVRNIHNKEKPFKC 290
           C   GK F     L  H+R HTGE+P+ C +  C + F+ S NL+ H R  H  EKPFKC
Sbjct: 65  CPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKR-THTGEKPFKC 123

Query: 291 PL--CDRCFGQQTNLDRHLKKH 310
               CDR F   ++  +H+  H
Sbjct: 124 EFEGCDRRFANSSDRKKHMHVH 145

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score =  101 bits (254), Expect = 8e-26
 Identities = 25/91 (27%), Positives = 34/91 (37%), Gaps = 12/91 (13%)

Query: 231 YACKFCGKVFPRSANLTRHLRTHTGEQPYK---------CKYCERSFSISSNLQRHVRNI 281
              K C + F     L  H+       P +         C    +SF     L  H+R +
Sbjct: 26  RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIR-V 84

Query: 282 HNKEKPFKCPL--CDRCFGQQTNLDRHLKKH 310
           H  EKPF CP   C + F +  NL  H + H
Sbjct: 85  HTGEKPFPCPFPGCGKIFARSENLKIHKRTH 115

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 95.8 bits (239), Expect = 1e-23
 Identities = 32/72 (44%), Positives = 46/72 (63%), Gaps = 9/72 (12%)

Query: 224 TG-KPKDRYACKF--CGKVFPRSANLTRHLRTHTGEQPYKCKY--CERSFSISSNLQRHV 278
           TG KP   + C F  CGK+F RS NL  H RTHTGE+P+KC++  C+R F+ SS+ ++H+
Sbjct: 86  TGEKP---FPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHM 142

Query: 279 RNIHNKEKPFKC 290
             +H  +K    
Sbjct: 143 H-VHTSDKSGPS 153

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 80.8 bits (200), Expect = 2e-18
 Identities = 16/84 (19%), Positives = 26/84 (30%), Gaps = 10/84 (11%)

Query: 236 CGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFK------ 289
            G                  +     K C+R+FS    L  HV  + +   P +      
Sbjct: 3   SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVT-MEHVGGPEQNNHVCY 61

Query: 290 ---CPLCDRCFGQQTNLDRHLKKH 310
              CP   + F  +  L  H++ H
Sbjct: 62  WEECPREGKSFKAKYKLVNHIRVH 85

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 46.1 bits (110), Expect = 3e-06
 Identities = 11/52 (21%), Positives = 17/52 (32%), Gaps = 2/52 (3%)

Query: 266 RSFSISSNLQRHVRN--IHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGP 315
            S S    +++ +    I   +       CDR F     L  H+      GP
Sbjct: 2   SSGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGP 53

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 99.1 bits (248), Expect = 8e-26
 Identities = 18/80 (22%), Positives = 28/80 (35%), Gaps = 9/80 (11%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQ----PYKCKYCERSFSISSNLQRHV 278
           TG KP   YAC  C K F +   L  H + +         + C  C ++F+  + + RH 
Sbjct: 11  TGEKP---YACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHA 67

Query: 279 RNIHNKEKPFKCPLCDRCFG 298
                     +        G
Sbjct: 68  D-NCAGPDGVEGENSGPSSG 86

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 87.6 bits (218), Expect = 2e-21
 Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 5/70 (7%)

Query: 245 NLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIH----NKEKPFKCPLCDRCFGQQ 300
           +     RTHTGE+PY C +C+++F     L  H +  +         F C  C + F ++
Sbjct: 2   SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFK-RYHDPNFVPAAFVCSKCGKTFTRR 60

Query: 301 TNLDRHLKKH 310
             + RH    
Sbjct: 61  NTMARHADNC 70

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 68.7 bits (169), Expect = 7e-15
 Identities = 11/47 (23%), Positives = 15/47 (31%), Gaps = 3/47 (6%)

Query: 222 NNTGKPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSF 268
           N        + C  CGK F R   + RH     G    + +    S 
Sbjct: 42  NFVPAA---FVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGPSS 85

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 94.9 bits (237), Expect = 2e-24
 Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 1/60 (1%)

Query: 251 RTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
            + +   P KC  C  S S  + L+ H R IH  ++PFKC  C     Q +NL +H+KK 
Sbjct: 2   SSGSSGHPEKCSECSYSCSSKAALRIHER-IHCTDRPFKCNYCSFDTKQPSNLSKHMKKF 60

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 91.0 bits (227), Expect = 5e-23
 Identities = 17/69 (24%), Positives = 26/69 (37%), Gaps = 5/69 (7%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIH 282
           +   P     C  C       A L  H R H  ++P+KC YC       SNL +H++   
Sbjct: 5   SSGHP---EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMK-KF 60

Query: 283 NKEKPFKCP 291
           + +      
Sbjct: 61  HGDMSGPSS 69

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 93.7 bits (234), Expect = 7e-24
 Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 1/68 (1%)

Query: 243 SANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTN 302
             +   H      ++PYKC  C+ SF    NL  H   +H  EKP++C +C   F +  N
Sbjct: 2   GHHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKT-VHTGEKPYRCNICGAQFNRPAN 60

Query: 303 LDRHLKKH 310
           L  H + H
Sbjct: 61  LKTHTRIH 68

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 91.4 bits (228), Expect = 5e-23
 Identities = 27/66 (40%), Positives = 34/66 (51%), Gaps = 5/66 (7%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIH 282
              KP   Y C  C   F    NL  H   HTGE+PY+C  C   F+  +NL+ H R IH
Sbjct: 13  HSDKP---YKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTR-IH 68

Query: 283 NKEKPF 288
           + EKP+
Sbjct: 69  SGEKPY 74

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 92.5 bits (231), Expect = 2e-23
 Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 1/68 (1%)

Query: 243 SANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTN 302
           S +  R        + YKC  C +SFS SS+L +H R  H  EKP+KC  C + F Q+++
Sbjct: 3   SGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRR-THTGEKPYKCDECGKAFIQRSH 61

Query: 303 LDRHLKKH 310
           L  H + H
Sbjct: 62  LIGHHRVH 69

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 92.5 bits (231), Expect = 2e-23
 Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 5/67 (7%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIH 282
              +    Y C  CGK F  S++L++H RTHTGE+PYKC  C ++F   S+L  H R +H
Sbjct: 14  RERRR---YKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHR-VH 69

Query: 283 NKEKPFK 289
               P  
Sbjct: 70  TGSGPSS 76

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 92.1 bits (230), Expect = 2e-23
 Identities = 31/66 (46%), Positives = 38/66 (57%), Gaps = 5/66 (7%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIH 282
           +G KP   Y C  CGK F RS+ L +H R HTGE+PYKC  C ++FS +S L  H R IH
Sbjct: 10  SGEKP---YGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQR-IH 65

Query: 283 NKEKPF 288
                 
Sbjct: 66  TSGPSS 71

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 87.1 bits (217), Expect = 1e-21
 Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 246 LTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDR 305
            +     H+GE+PY C  C ++FS SS L +H R +H  EKP+KC  C + F Q + L  
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQR-VHTGEKPYKCLECGKAFSQNSGLIN 60

Query: 306 HLKKH 310
           H + H
Sbjct: 61  HQRIH 65

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 91.4 bits (228), Expect = 3e-23
 Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 3/61 (4%)

Query: 226 KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKE 285
           +    + C+ C + F R  +L RH R+HT E+PY C  C R+F+    L RH + IH+  
Sbjct: 1   RS---FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN 57

Query: 286 K 286
            
Sbjct: 58  L 58

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 76.8 bits (190), Expect = 5e-18
 Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 1/52 (1%)

Query: 258 PYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKK 309
            + C+ C R+F+   +L+RH R  H  EKP+ C LC+R F ++  L RH +K
Sbjct: 2   SFVCEVCTRAFARQEHLKRHYR-SHTNEKPYPCGLCNRAFTRRDLLIRHAQK 52

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 37.1 bits (87), Expect = 6e-04
 Identities = 10/25 (40%), Positives = 15/25 (60%)

Query: 286 KPFKCPLCDRCFGQQTNLDRHLKKH 310
           + F C +C R F +Q +L RH + H
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSH 25

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 82.8 bits (205), Expect = 6e-20
 Identities = 13/61 (21%), Positives = 24/61 (39%), Gaps = 4/61 (6%)

Query: 253 HTGEQPYKCKYCERSFSISSNLQRHVRNIHNK---EKPFKCPLCDRCFGQQTNLDRHLKK 309
            +G    +C+ C  +    ++L  H R  H +      F C  C + F +  ++  H  K
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQR-KHAETVAALRFPCEFCGKRFEKPDSVAAHRSK 60

Query: 310 H 310
            
Sbjct: 61  S 61

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 82.5 bits (204), Expect = 8e-20
 Identities = 15/80 (18%), Positives = 26/80 (32%), Gaps = 7/80 (8%)

Query: 223 NTG-KPKDRYACKFCGKVFPRSANLTRHLRTHT---GEQPYKCKYCERSFSISSNLQRHV 278
           ++G        C+ CG    + A+L  H R H        + C++C + F    ++  H 
Sbjct: 2   SSGSSG---LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHR 58

Query: 279 RNIHNKEKPFKCPLCDRCFG 298
              H               G
Sbjct: 59  SKSHPALLLAPQESSGPSSG 78

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 80.8 bits (200), Expect = 3e-19
 Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 5/71 (7%)

Query: 242 RSANLTRHLRTHTGEQPYKCKY--CERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQ 299
              NL  ++      +PY C    C+R FS S  L RH+R IH  +KPF+C +C R F +
Sbjct: 5   PMNNLLNYVVPK--MRPYACPVESCDRRFSRSDELTRHIR-IHTGQKPFQCRICMRNFSR 61

Query: 300 QTNLDRHLKKH 310
             +L  H++ H
Sbjct: 62  SDHLTTHIRTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 75.0 bits (185), Expect = 3e-17
 Identities = 25/51 (49%), Positives = 36/51 (70%), Gaps = 2/51 (3%)

Query: 231 YAC--KFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVR 279
           YAC  + C + F RS  LTRH+R HTG++P++C+ C R+FS S +L  H+R
Sbjct: 20  YACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIR 70

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 42.7 bits (101), Expect = 9e-06
 Identities = 12/25 (48%), Positives = 17/25 (68%)

Query: 230 RYACKFCGKVFPRSANLTRHLRTHT 254
            + C+ C + F RS +LT H+RTHT
Sbjct: 49  PFQCRICMRNFSRSDHLTTHIRTHT 73

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 77.6 bits (192), Expect = 2e-18
 Identities = 13/49 (26%), Positives = 24/49 (48%)

Query: 249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCF 297
              + +  +PY C+ C + FS   +L  H++ +H  E+P KC +     
Sbjct: 3   SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 69.5 bits (171), Expect = 1e-15
 Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 5/51 (9%)

Query: 221 SNNTG-KPKDRYACKFCGKVFPRSANLTRHL-RTHTGEQPYKCKYCERSFS 269
           S+ +  KP   Y C+ CGK F R  +L  H+ + HT E+P+KC+      S
Sbjct: 5   SSGSVGKP---YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 40.3 bits (95), Expect = 3e-05
 Identities = 8/29 (27%), Positives = 16/29 (55%)

Query: 281 IHNKEKPFKCPLCDRCFGQQTNLDRHLKK 309
             +  KP+ C  C + F +  +L+ H+K+
Sbjct: 6   SGSVGKPYICQSCGKGFSRPDHLNGHIKQ 34

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 74.3 bits (183), Expect = 5e-17
 Identities = 24/53 (45%), Positives = 33/53 (62%), Gaps = 4/53 (7%)

Query: 231 YACKF--CGKVFPRSANLTRHLRTHTGEQPYKCKY--CERSFSISSNLQRHVR 279
           + C    CGK + +S++L  H RTHTGE+P+ C +  CER F+ S  L RH R
Sbjct: 18  HICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRR 70

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 70.5 bits (173), Expect = 1e-15
 Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 5/72 (6%)

Query: 243 SANLTRHLRTHTGEQPYKCKY--CERSFSISSNLQRHVRNIHNKEKPFKC--PLCDRCFG 298
           S+  +      +  + + C +  C +++  SS+L+ H R  H  EKPF C    C+R F 
Sbjct: 2   SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTR-THTGEKPFSCSWKGCERRFA 60

Query: 299 QQTNLDRHLKKH 310
           +   L RH + H
Sbjct: 61  RSDELSRHRRTH 72

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 71.8 bits (177), Expect = 2e-16
 Identities = 15/43 (34%), Positives = 24/43 (55%)

Query: 249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCP 291
              + TG++PY+C  C ++F  +++L RH R  H  EKP    
Sbjct: 3   SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 56.0 bits (136), Expect = 9e-11
 Identities = 19/40 (47%), Positives = 23/40 (57%), Gaps = 5/40 (12%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLR-THTGEQPYKC 261
           TG KP   Y C  CGK F ++ +L RH R  HTGE+P   
Sbjct: 8   TGKKP---YECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 70.6 bits (174), Expect = 5e-16
 Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 1/43 (2%)

Query: 248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
               + TGE+PYKC  C ++FS +S L RH R IH  EKP   
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFSQTSKLARHQR-IHTGEKPSGP 43

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.8 bits (146), Expect = 4e-12
 Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           TG KP   Y C  CGK F +++ L RH R HTGE+P   
Sbjct: 8   TGEKP---YKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 9e-05
 Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 1/35 (2%)

Query: 276 RHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
                    EKP+KC  C + F Q + L RH + H
Sbjct: 2   SSGS-SGTGEKPYKCNECGKAFSQTSKLARHQRIH 35

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 70.6 bits (174), Expect = 6e-16
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)

Query: 248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
               + TGE+PY C  C ++F+  SNL +H + IH  EKP   
Sbjct: 2   SSGSSGTGERPYICTVCGKAFTDRSNLIKHQK-IHTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.4 bits (145), Expect = 5e-12
 Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           TG +P   Y C  CGK F   +NL +H + HTGE+P   
Sbjct: 8   TGERP---YICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 5e-05
 Identities = 10/35 (28%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 276 RHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
                    E+P+ C +C + F  ++NL +H K H
Sbjct: 2   SSGS-SGTGERPYICTVCGKAFTDRSNLIKHQKIH 35

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 70.7 bits (174), Expect = 6e-16
 Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 1/43 (2%)

Query: 248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
               + TGE+PY CK C +SF  +S L +H R +H+ EKP   
Sbjct: 2   SSGSSGTGEKPYNCKECGKSFRWASCLLKHQR-VHSGEKPSGP 43

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 60.3 bits (147), Expect = 2e-12
 Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 4/40 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCK 262
           TG KP   Y CK CGK F  ++ L +H R H+GE+P    
Sbjct: 8   TGEKP---YNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 9/35 (25%), Positives = 14/35 (40%), Gaps = 1/35 (2%)

Query: 276 RHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
                    EKP+ C  C + F   + L +H + H
Sbjct: 2   SSGS-SGTGEKPYNCKECGKSFRWASCLLKHQRVH 35

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 70.2 bits (173), Expect = 7e-16
 Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 1/43 (2%)

Query: 248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
               + TGE+P++C  C +SFSISS L  H R IH  EKP   
Sbjct: 2   SSGSSGTGEKPFECAECGKSFSISSQLATHQR-IHTGEKPSGP 43

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 59.4 bits (145), Expect = 5e-12
 Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           TG KP   + C  CGK F  S+ L  H R HTGE+P   
Sbjct: 8   TGEKP---FECAECGKSFSISSQLATHQRIHTGEKPSGP 43

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 36.7 bits (86), Expect = 5e-04
 Identities = 10/35 (28%), Positives = 14/35 (40%), Gaps = 1/35 (2%)

Query: 276 RHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
                    EKPF+C  C + F   + L  H + H
Sbjct: 2   SSGS-SGTGEKPFECAECGKSFSISSQLATHQRIH 35

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 70.2 bits (173), Expect = 7e-16
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)

Query: 248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
               + TGE+ YKC  C + FS +S L +H + IH  EKP   
Sbjct: 2   SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQK-IHTGEKPSGP 43

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 61.0 bits (149), Expect = 2e-12
 Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           TG K    Y C  CGKVF R++ L++H + HTGE+P   
Sbjct: 8   TGEKR---YKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 38.7 bits (91), Expect = 9e-05
 Identities = 10/35 (28%), Positives = 15/35 (42%), Gaps = 1/35 (2%)

Query: 276 RHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
                    EK +KC  C + F + + L +H K H
Sbjct: 2   SSGS-SGTGEKRYKCNECGKVFSRNSQLSQHQKIH 35

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 70.2 bits (173), Expect = 7e-16
 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)

Query: 249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
              + TGE+P+KC  C +SF   S L RH   +H  EKP   
Sbjct: 3   SGSSGTGEKPFKCDICGKSFCGRSRLNRHSM-VHTAEKPSGP 43

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.6 bits (148), Expect = 2e-12
 Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           TG KP   + C  CGK F   + L RH   HT E+P   
Sbjct: 8   TGEKP---FKCDICGKSFCGRSRLNRHSMVHTAEKPSGP 43

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 6e-05
 Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)

Query: 277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
                   EKPFKC +C + F  ++ L+RH   H
Sbjct: 3   SGS-SGTGEKPFKCDICGKSFCGRSRLNRHSMVH 35

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 70.2 bits (173), Expect = 8e-16
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)

Query: 248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
               + TGE+P++C  C+++F+  SNL  H R  H  EKP   
Sbjct: 2   SSGSSGTGEKPFECSECQKAFNTKSNLIVHQR-THTGEKPSGP 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.4 bits (145), Expect = 4e-12
 Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           TG KP   + C  C K F   +NL  H RTHTGE+P   
Sbjct: 8   TGEKP---FECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 4e-05
 Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 1/35 (2%)

Query: 276 RHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
                    EKPF+C  C + F  ++NL  H + H
Sbjct: 2   SSGS-SGTGEKPFECSECQKAFNTKSNLIVHQRTH 35

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 70.2 bits (173), Expect = 8e-16
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
               + +GE+PYKC  C ++F   ++L  H R IH   +P   
Sbjct: 2   SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRR-IHTGYRPSGP 43

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.1 bits (152), Expect = 6e-13
 Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           +G KP   Y C  CGK F R  +L  H R HTG +P   
Sbjct: 8   SGEKP---YKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 4e-05
 Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 276 RHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
                  + EKP+KC  C + F + T+L+ H + H
Sbjct: 2   SSGS-SGSGEKPYKCSECGKAFHRHTHLNEHRRIH 35

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 70.2 bits (173), Expect = 8e-16
 Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)

Query: 248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
               + TGE+PY C+ C ++F   S LQ H R IH  EKP   
Sbjct: 2   SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQR-IHTGEKPSGP 43

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.5 bits (145), Expect = 4e-12
 Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           TG KP   Y C+ CGK F   + L  H R HTGE+P   
Sbjct: 8   TGEKP---YNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 9/35 (25%), Positives = 13/35 (37%), Gaps = 1/35 (2%)

Query: 276 RHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
                    EKP+ C  C + F   + L  H + H
Sbjct: 2   SSGS-SGTGEKPYNCEECGKAFIHDSQLQEHQRIH 35

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 70.5 bits (172), Expect = 9e-16
 Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 1/57 (1%)

Query: 230 RYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEK 286
           +Y C+ CG    + + L +H+RTHT  +PY C YC  SF    NL +H++      K
Sbjct: 1   KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMK-SKAHSK 56

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 56.6 bits (136), Expect = 7e-11
 Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)

Query: 259 YKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEAD 313
           Y C+ C       S L++H+R  H   +P+ C  C+  F  + NL +H+K     
Sbjct: 2   YICEECGIRXKKPSMLKKHIR-THTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHS 55

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 69.8 bits (172), Expect = 9e-16
 Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 1/43 (2%)

Query: 248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
               + TGE+PYKC+ C ++F +SS+L +H   +H+ E+P   
Sbjct: 2   SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHS-VHSGERPSGP 43

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.4 bits (150), Expect = 1e-12
 Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           TG KP   Y C+ CGK F  S++L +H   H+GE+P   
Sbjct: 8   TGEKP---YKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 1e-04
 Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 1/35 (2%)

Query: 276 RHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
                    EKP+KC +C + F   ++L +H   H
Sbjct: 2   SSGS-SGTGEKPYKCQVCGKAFRVSSHLVQHHSVH 35

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 69.8 bits (172), Expect = 9e-16
 Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)

Query: 248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
               + TGE+PYKC  C + F  +S+L RH   IH  EKP   
Sbjct: 2   SSGSSGTGEKPYKCHECGKVFRRNSHLARHQL-IHTGEKPSGP 43

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.0 bits (149), Expect = 1e-12
 Identities = 20/39 (51%), Positives = 24/39 (61%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           TG KP   Y C  CGKVF R+++L RH   HTGE+P   
Sbjct: 8   TGEKP---YKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 5e-05
 Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 1/35 (2%)

Query: 276 RHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
                    EKP+KC  C + F + ++L RH   H
Sbjct: 2   SSGS-SGTGEKPYKCHECGKVFRRNSHLARHQLIH 35

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 69.8 bits (172), Expect = 9e-16
 Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%)

Query: 248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
               + +GE+P+KCK C ++F  + +L  H+R IH  EKP   
Sbjct: 2   SSGSSGSGEKPFKCKECGKAFRQNIHLASHLR-IHTGEKPSGP 43

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.0 bits (149), Expect = 1e-12
 Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           +G KP   + CK CGK F ++ +L  HLR HTGE+P   
Sbjct: 8   SGEKP---FKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 3e-05
 Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 276 RHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
                  + EKPFKC  C + F Q  +L  HL+ H
Sbjct: 2   SSGS-SGSGEKPFKCKECGKAFRQNIHLASHLRIH 35

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 69.9 bits (172), Expect = 1e-15
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
               + TG +PY C  C ++FS+ S+L  H   IH  EKP   
Sbjct: 2   SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQV-IHTGEKPSGP 43

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 7e-12
 Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           TG KP   Y C  CGK F   ++LT H   HTGE+P   
Sbjct: 8   TGVKP---YMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 8/35 (22%), Positives = 12/35 (34%), Gaps = 1/35 (2%)

Query: 276 RHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
                     KP+ C  C + F   ++L  H   H
Sbjct: 2   SSGS-SGTGVKPYMCNECGKAFSVYSSLTTHQVIH 35

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 69.9 bits (172), Expect = 1e-15
 Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 1/43 (2%)

Query: 248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
               + +GE+PY C YC ++F +S+ L RH R IH  EKP   
Sbjct: 2   SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQR-IHTGEKPSGP 43

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.6 bits (148), Expect = 2e-12
 Identities = 20/39 (51%), Positives = 23/39 (58%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           +G KP   Y C +CGK F  SA L RH R HTGE+P   
Sbjct: 8   SGEKP---YVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 9e-05
 Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 1/35 (2%)

Query: 276 RHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
                  + EKP+ C  C + FG    L RH + H
Sbjct: 2   SSGS-SGSGEKPYVCDYCGKAFGLSAELVRHQRIH 35

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 69.5 bits (171), Expect = 1e-15
 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)

Query: 248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
               + TGE+P+KC  C +S++   +L +H R +H  EKP   
Sbjct: 2   SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQR-VHTGEKPSGP 43

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.6 bits (148), Expect = 2e-12
 Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           TG KP   + C  CGK + +  +LT+H R HTGE+P   
Sbjct: 8   TGEKP---FKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 3e-05
 Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 276 RHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
                    EKPFKC  C + + Q+ +L +H + H
Sbjct: 2   SSGS-SGTGEKPFKCGECGKSYNQRVHLTQHQRVH 35

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 69.5 bits (171), Expect = 1e-15
 Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 1/42 (2%)

Query: 249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
              +  GE+ YKC  C + FS SS+LQ H R +H  EKP   
Sbjct: 3   SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQR-VHTGEKPSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.5 bits (145), Expect = 5e-12
 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
            G K    Y C  CGK F +S++L  H R HTGE+P   
Sbjct: 8   MGEKC---YKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 1/34 (2%)

Query: 277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
                   EK +KC +C + F Q ++L  H + H
Sbjct: 3   SGS-SGMGEKCYKCDVCGKEFSQSSHLQTHQRVH 35

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 69.5 bits (171), Expect = 1e-15
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)

Query: 248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
               + TGE+P++C+ C +SFS +S L  H R IH  E P   
Sbjct: 2   SSGSSGTGEKPHECRECGKSFSFNSQLIVHQR-IHTGENPSGP 43

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 1e-11
 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           TG KP   + C+ CGK F  ++ L  H R HTGE P   
Sbjct: 8   TGEKP---HECRECGKSFSFNSQLIVHQRIHTGENPSGP 43

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 7e-04
 Identities = 9/35 (25%), Positives = 13/35 (37%), Gaps = 1/35 (2%)

Query: 276 RHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
                    EKP +C  C + F   + L  H + H
Sbjct: 2   SSGS-SGTGEKPHECRECGKSFSFNSQLIVHQRIH 35

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 69.4 bits (171), Expect = 1e-15
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)

Query: 248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
               + +GE+PYKC  C + F+ +S+L  H R IH  EKP   
Sbjct: 2   SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWR-IHTGEKPSGP 43

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.6 bits (148), Expect = 2e-12
 Identities = 19/39 (48%), Positives = 25/39 (64%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           +G KP   Y C  CGKVF ++++LT H R HTGE+P   
Sbjct: 8   SGEKP---YKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 3e-05
 Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 276 RHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
                  + EKP+KC  C + F Q ++L  H + H
Sbjct: 2   SSGS-SGSGEKPYKCNECGKVFTQNSHLTNHWRIH 35

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 69.4 bits (171), Expect = 1e-15
 Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 1/43 (2%)

Query: 248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
               + TGE+PYKC  C + F+ +S+L RH   IH  EKP   
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRG-IHTGEKPSGP 43

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.2 bits (147), Expect = 3e-12
 Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           TG KP   Y C  CGKVF ++++L RH   HTGE+P   
Sbjct: 8   TGEKP---YKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.5 bits (96), Expect = 3e-05
 Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 1/35 (2%)

Query: 276 RHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
                    EKP+KC  C + F Q ++L RH   H
Sbjct: 2   SSGS-SGTGEKPYKCNECGKVFTQNSHLVRHRGIH 35

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 69.5 bits (171), Expect = 1e-15
 Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 1/43 (2%)

Query: 248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
               + TGE+PYKC  C + F  +S L RH R IH  EKP   
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQR-IHTGEKPSGP 43

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.4 bits (145), Expect = 4e-12
 Identities = 20/39 (51%), Positives = 24/39 (61%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           TG KP   Y C  CGKVF  ++ L+RH R HTGE+P   
Sbjct: 8   TGEKP---YKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 8e-05
 Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 1/35 (2%)

Query: 276 RHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
                    EKP+KC  C + F   + L RH + H
Sbjct: 2   SSGS-SGTGEKPYKCNECGKVFRHNSYLSRHQRIH 35

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 69.5 bits (171), Expect = 1e-15
 Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%)

Query: 249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
              + TGE+PY+C  C ++FS  ++L +H R +H+ EKP   
Sbjct: 3   SGSSGTGEKPYECDVCRKAFSHHASLTQHQR-VHSGEKPSGP 43

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.2 bits (147), Expect = 3e-12
 Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           TG KP   Y C  C K F   A+LT+H R H+GE+P   
Sbjct: 8   TGEKP---YECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 69.5 bits (171), Expect = 1e-15
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
               + TG++PY+C  C ++F   S+L  H R  H  EKP   
Sbjct: 2   SSGSSGTGQRPYECIECGKAFKTKSSLICHRR-SHTGEKPSGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 59.1 bits (144), Expect = 6e-12
 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 4/40 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCK 262
           TG +P   Y C  CGK F   ++L  H R+HTGE+P    
Sbjct: 8   TGQRP---YECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 37.1 bits (87), Expect = 4e-04
 Identities = 7/35 (20%), Positives = 16/35 (45%), Gaps = 1/35 (2%)

Query: 276 RHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
                    ++P++C  C + F  +++L  H + H
Sbjct: 2   SSGS-SGTGQRPYECIECGKAFKTKSSLICHRRSH 35

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 69.5 bits (171), Expect = 2e-15
 Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)

Query: 249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
              + TGE+P++CK C  +FS S +L +H+R  H +  P   
Sbjct: 3   SGSSGTGEKPFQCKECGMNFSWSCSLFKHLR-SHERTDPSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.5 bits (145), Expect = 4e-12
 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           TG KP   + CK CG  F  S +L +HLR+H    P   
Sbjct: 8   TGEKP---FQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.8 bits (86), Expect = 4e-04
 Identities = 13/36 (36%), Positives = 18/36 (50%)

Query: 280 NIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGP 315
           +    EKPF+C  C   F    +L +HL+ HE   P
Sbjct: 5   SSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDP 40

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 69.1 bits (170), Expect = 2e-15
 Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 1/42 (2%)

Query: 249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
              + TGE+PYKC  C +SF   S+L  H R IH  EKP   
Sbjct: 3   SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQR-IHTGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.8 bits (146), Expect = 3e-12
 Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           TG KP   Y C  C K F   ++LT H R HTGE+P   
Sbjct: 8   TGEKP---YKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 7e-04
 Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 1/34 (2%)

Query: 277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
                   EKP+KC +C + F   ++L  H + H
Sbjct: 3   SGS-SGTGEKPYKCDVCHKSFRYGSSLTVHQRIH 35

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 69.0 bits (170), Expect = 2e-15
 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)

Query: 249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
              + TGE+PY+C  C+++F+  SNL  H R  H  E     
Sbjct: 3   SGSSGTGEKPYECNECQKAFNTKSNLMVHQR-THTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 60.2 bits (147), Expect = 2e-12
 Identities = 18/39 (46%), Positives = 19/39 (48%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           TG KP   Y C  C K F   +NL  H RTHTGE     
Sbjct: 8   TGEKP---YECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 1/34 (2%)

Query: 277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
                   EKP++C  C + F  ++NL  H + H
Sbjct: 3   SGS-SGTGEKPYECNECQKAFNTKSNLMVHQRTH 35

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 69.1 bits (170), Expect = 2e-15
 Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 1/42 (2%)

Query: 249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
              + TGE+PY C  C ++F+I SNL +H + IH K+KP   
Sbjct: 3   SGSSGTGEKPYICAECGKAFTIRSNLIKHQK-IHTKQKPSGP 43

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.2 bits (147), Expect = 2e-12
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           TG KP   Y C  CGK F   +NL +H + HT ++P   
Sbjct: 8   TGEKP---YICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 1/34 (2%)

Query: 277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
                   EKP+ C  C + F  ++NL +H K H
Sbjct: 3   SGS-SGTGEKPYICAECGKAFTIRSNLIKHQKIH 35

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 69.1 bits (170), Expect = 2e-15
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)

Query: 248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
               + TGE+PYKC  C + F+ +S+L  H R IH   KP   
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLANHQR-IHTGVKPSGP 43

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.8 bits (146), Expect = 4e-12
 Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           TG KP   Y C  CGKVF ++++L  H R HTG +P   
Sbjct: 8   TGEKP---YKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 6e-05
 Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 1/35 (2%)

Query: 276 RHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
                    EKP+KC  C + F Q ++L  H + H
Sbjct: 2   SSGS-SGTGEKPYKCNECGKVFTQNSHLANHQRIH 35

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 69.1 bits (170), Expect = 2e-15
 Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 1/43 (2%)

Query: 248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
               + TGE+P+KC  C +SF  S++L +H R IH  EKP   
Sbjct: 2   SSGSSGTGERPHKCNECGKSFIQSAHLIQHQR-IHTGEKPSGP 43

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.4 bits (145), Expect = 4e-12
 Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           TG +P   + C  CGK F +SA+L +H R HTGE+P   
Sbjct: 8   TGERP---HKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 7e-05
 Identities = 10/35 (28%), Positives = 15/35 (42%), Gaps = 1/35 (2%)

Query: 276 RHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
                    E+P KC  C + F Q  +L +H + H
Sbjct: 2   SSGS-SGTGERPHKCNECGKSFIQSAHLIQHQRIH 35

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 69.1 bits (170), Expect = 2e-15
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%)

Query: 248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
               + TGE+PYKC  C ++F+  S L  H +  H  E+    
Sbjct: 2   SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQ-SHTGERHSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.4 bits (145), Expect = 4e-12
 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           TG KP   Y C  CGK F R + L  H ++HTGE+    
Sbjct: 8   TGEKP---YKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 1/35 (2%)

Query: 276 RHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
                    EKP+KC  C + F +++ L  H + H
Sbjct: 2   SSGS-SGTGEKPYKCSDCGKAFTRKSGLHIHQQSH 35

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 69.1 bits (170), Expect = 2e-15
 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)

Query: 249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
              + TGE+PYKC+ C + F    +L  H   +H  EKP   
Sbjct: 3   SGSSGTGEKPYKCEECGKGFICRRDLYTHHM-VHTGEKPSGP 43

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 60.6 bits (148), Expect = 2e-12
 Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           TG KP   Y C+ CGK F    +L  H   HTGE+P   
Sbjct: 8   TGEKP---YKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 37.5 bits (88), Expect = 3e-04
 Identities = 10/34 (29%), Positives = 14/34 (41%), Gaps = 1/34 (2%)

Query: 277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
                   EKP+KC  C + F  + +L  H   H
Sbjct: 3   SGS-SGTGEKPYKCEECGKGFICRRDLYTHHMVH 35

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 69.1 bits (170), Expect = 2e-15
 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)

Query: 248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
               + +GE+P+KC+ C + F+ +S L  H R +H  EKP   
Sbjct: 2   SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQR-VHTGEKPSGP 43

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 7e-12
 Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           +G KP   + C+ CGK F +++ L  H R HTGE+P   
Sbjct: 8   SGEKP---FKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 4e-05
 Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 1/35 (2%)

Query: 276 RHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
                  + EKPFKC  C + F Q + L  H + H
Sbjct: 2   SSGS-SGSGEKPFKCEECGKRFTQNSQLHSHQRVH 35

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 69.1 bits (170), Expect = 2e-15
 Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)

Query: 248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
               + TGE+PY+C  C ++F+  +NL +H R IH  EKP   
Sbjct: 2   SSGSSGTGEKPYRCGECGKAFAQKANLTQHQR-IHTGEKPSGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.2 bits (147), Expect = 3e-12
 Identities = 21/39 (53%), Positives = 24/39 (61%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           TG KP   Y C  CGK F + ANLT+H R HTGE+P   
Sbjct: 8   TGEKP---YRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 9e-05
 Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 276 RHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
                    EKP++C  C + F Q+ NL +H + H
Sbjct: 2   SSGS-SGTGEKPYRCGECGKAFAQKANLTQHQRIH 35

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 69.1 bits (170), Expect = 2e-15
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)

Query: 248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
               + TGE+PY+C  C ++FS+ S+L  H   IH  +KP   
Sbjct: 2   SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQA-IHTGKKPSGP 43

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 6e-12
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 4/40 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCK 262
           TG KP   Y C  CGK F   ++LT H   HTG++P    
Sbjct: 8   TGEKP---YECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 6e-04
 Identities = 9/35 (25%), Positives = 15/35 (42%), Gaps = 1/35 (2%)

Query: 276 RHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
                    EKP++C  C + F  +++L  H   H
Sbjct: 2   SSGS-SGTGEKPYECNQCGKAFSVRSSLTTHQAIH 35

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 68.7 bits (169), Expect = 2e-15
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)

Query: 248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
               + TGE+PY+C  C ++F+  SNL  H + IH  EKP   
Sbjct: 2   SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQK-IHTGEKPSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 9e-12
 Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           TG KP   Y C  CGK F   +NL  H + HTGE+P   
Sbjct: 8   TGEKP---YRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 4e-05
 Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 1/35 (2%)

Query: 276 RHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
                    EKP++C  C + F  ++NL  H K H
Sbjct: 2   SSGS-SGTGEKPYRCAECGKAFTDRSNLFTHQKIH 35

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 68.7 bits (169), Expect = 2e-15
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)

Query: 249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
              + TGE+PYKC+ C + ++   NL  H + +H  E+P   
Sbjct: 3   SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQK-VHTGERPSGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.0 bits (149), Expect = 1e-12
 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           TG KP   Y C+ CGK +    NL  H + HTGE+P   
Sbjct: 8   TGEKP---YKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%)

Query: 277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
                   EKP+KC  C + +  + NLD H K H
Sbjct: 3   SGS-SGTGEKPYKCEKCGKGYNSKFNLDMHQKVH 35

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 68.7 bits (169), Expect = 3e-15
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
               + TGE+PYKC  C ++F   S+L  H    H+ EKP   
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFRARSSLAIHQA-THSGEKPSGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 1e-11
 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           TG KP   Y C  CGK F   ++L  H  TH+GE+P   
Sbjct: 8   TGEKP---YKCNECGKAFRARSSLAIHQATHSGEKPSGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 10/35 (28%), Positives = 15/35 (42%), Gaps = 1/35 (2%)

Query: 276 RHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
                    EKP+KC  C + F  +++L  H   H
Sbjct: 2   SSGS-SGTGEKPYKCNECGKAFRARSSLAIHQATH 35

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 68.7 bits (169), Expect = 3e-15
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
               +  GE+PY C  C ++FS  S L  H+R  H+ EKP   
Sbjct: 2   SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMR-THSGEKPSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.5 bits (145), Expect = 4e-12
 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
            G KP   Y C  CGK F   + L  H+RTH+GE+P   
Sbjct: 8   AGEKP---YGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 9/35 (25%), Positives = 15/35 (42%), Gaps = 1/35 (2%)

Query: 276 RHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
                    EKP+ C  C + F  ++ L  H++ H
Sbjct: 2   SSGS-SGAGEKPYGCSECGKAFSSKSYLIIHMRTH 35

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 68.7 bits (169), Expect = 3e-15
 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 1/42 (2%)

Query: 249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
              + TGE+PYKC  C ++F   SNL  H   IH  EKP   
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRAHSNLTTHQV-IHTGEKPSGP 43

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.2 bits (147), Expect = 2e-12
 Identities = 19/39 (48%), Positives = 21/39 (53%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           TG KP   Y C  CGK F   +NLT H   HTGE+P   
Sbjct: 8   TGEKP---YKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 1e-04
 Identities = 11/34 (32%), Positives = 14/34 (41%), Gaps = 1/34 (2%)

Query: 277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
                   EKP+KC  C + F   +NL  H   H
Sbjct: 3   SGS-SGTGEKPYKCNECGKAFRAHSNLTTHQVIH 35

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 68.7 bits (169), Expect = 3e-15
 Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 1/43 (2%)

Query: 248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
               + TGE+PY C  C ++F +S++L +H+R +H +E     
Sbjct: 2   SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLR-VHTQETLSGP 43

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.4 bits (150), Expect = 1e-12
 Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 4/40 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCK 262
           TG KP   Y+C  CGK F  SA+L +HLR HT E      
Sbjct: 8   TGEKP---YSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 10/35 (28%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 276 RHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
                    EKP+ C +C + F    +L++HL+ H
Sbjct: 2   SSGS-SGTGEKPYSCNVCGKAFVLSAHLNQHLRVH 35

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 68.3 bits (168), Expect = 3e-15
 Identities = 13/43 (30%), Positives = 17/43 (39%), Gaps = 1/43 (2%)

Query: 248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
               + TG +PY C  C ++F   S L  H R  H  E     
Sbjct: 2   SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTR-THTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 59.8 bits (146), Expect = 4e-12
 Identities = 18/39 (46%), Positives = 19/39 (48%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           TG KP   Y C  CGK F   + L  H RTHTGE     
Sbjct: 8   TGMKP---YVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 68.3 bits (168), Expect = 3e-15
 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)

Query: 249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
              + TGE+ Y CK C +SFS +  L +H R +H+ EKP   
Sbjct: 3   SGSSGTGEKLYNCKECGKSFSRAPCLLKHER-LHSGEKPSGP 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.8 bits (146), Expect = 3e-12
 Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           TG K    Y CK CGK F R+  L +H R H+GE+P   
Sbjct: 8   TGEKL---YNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 68.3 bits (168), Expect = 3e-15
 Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 1/43 (2%)

Query: 248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
               + TGE+PY+CK C ++FS +++L +H R +H  EKP   
Sbjct: 2   SSGSSGTGEKPYECKECGKAFSQTTHLIQHQR-VHTGEKPSGP 43

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 59.8 bits (146), Expect = 3e-12
 Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           TG KP   Y CK CGK F ++ +L +H R HTGE+P   
Sbjct: 8   TGEKP---YECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 38.6 bits (91), Expect = 1e-04
 Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 276 RHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
                    EKP++C  C + F Q T+L +H + H
Sbjct: 2   SSGS-SGTGEKPYECKECGKAFSQTTHLIQHQRVH 35

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 68.3 bits (168), Expect = 4e-15
 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)

Query: 249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
              + TG +PY+C  C ++FS +S L RH R +H  EKP   
Sbjct: 3   SGSSGTGGKPYQCNECGKAFSQTSKLARHQR-VHTGEKPSGP 43

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.6 bits (148), Expect = 2e-12
 Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           TG KP   Y C  CGK F +++ L RH R HTGE+P   
Sbjct: 8   TGGKP---YQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 4e-04
 Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 1/34 (2%)

Query: 277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
                    KP++C  C + F Q + L RH + H
Sbjct: 3   SGS-SGTGGKPYQCNECGKAFSQTSKLARHQRVH 35

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 68.3 bits (168), Expect = 4e-15
 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
               + TG +PY C  C ++FS+ S L  H R  H   KP   
Sbjct: 2   SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQR-SHTGVKPSGP 43

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 59.5 bits (145), Expect = 5e-12
 Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           TG KP   Y C  C K F   + L  H R+HTG +P   
Sbjct: 8   TGVKP---YGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 8/35 (22%), Positives = 13/35 (37%), Gaps = 1/35 (2%)

Query: 276 RHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
                     KP+ C  C + F  ++ L  H + H
Sbjct: 2   SSGS-SGTGVKPYGCSQCAKTFSLKSQLIVHQRSH 35

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 67.9 bits (167), Expect = 4e-15
 Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)

Query: 248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
               + TGE+PY+CK C ++F+  ++L +H +  H  EKP   
Sbjct: 2   SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQK-THTGEKPSGP 43

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.4 bits (150), Expect = 8e-13
 Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 4/40 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCK 262
           TG KP   Y CK C K F + A+L +H +THTGE+P    
Sbjct: 8   TGEKP---YECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 6e-05
 Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 276 RHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
                    EKP++C +C + F Q+ +L +H K H
Sbjct: 2   SSGS-SGTGEKPYECKVCSKAFTQKAHLAQHQKTH 35

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 67.9 bits (167), Expect = 4e-15
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)

Query: 248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
               + TGE+PY+C  C ++FS   +L  H R IH+ +KP   
Sbjct: 2   SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQR-IHSGKKPSGP 43

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 6e-12
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           TG KP   Y C  CGK F    +L+ H R H+G++P   
Sbjct: 8   TGEKP---YECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 67.9 bits (167), Expect = 4e-15
 Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 1/42 (2%)

Query: 249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
              + + E+PYKC+ C + ++   NL  H R +H  EK    
Sbjct: 3   SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQR-VHMGEKTSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.8 bits (146), Expect = 3e-12
 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           +  KP   Y C+ CGK + R  NL  H R H GE+    
Sbjct: 8   SVEKP---YKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 5e-05
 Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)

Query: 277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
                 + EKP+KC  C + + ++ NLD H + H
Sbjct: 3   SGS-SGSVEKPYKCEDCGKGYNRRLNLDMHQRVH 35

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 68.1 bits (167), Expect = 5e-15
 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 3/44 (6%)

Query: 249 HLRTHTGEQPYKCKY--CERSFSISSNLQRHVRNIHNKEKPFKC 290
              + TGE+P+ C +  C   FS S  L RH R  H+  KP   
Sbjct: 3   SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRR-SHSGVKPSGP 45

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 58.1 bits (141), Expect = 2e-11
 Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 6/41 (14%)

Query: 224 TG-KPKDRYACKF--CGKVFPRSANLTRHLRTHTGEQPYKC 261
           TG KP   +AC +  CG  F RS  L+RH R+H+G +P   
Sbjct: 8   TGEKP---FACTWPGCGWRFSRSDELSRHRRSHSGVKPSGP 45

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 40.7 bits (96), Expect = 2e-05
 Identities = 13/41 (31%), Positives = 15/41 (36%), Gaps = 3/41 (7%)

Query: 277 HVRNIHNKEKPFKC--PLCDRCFGQQTNLDRHLKKHEADGP 315
                   EKPF C  P C   F +   L RH + H    P
Sbjct: 3   SGS-SGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKP 42

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 68.0 bits (167), Expect = 5e-15
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)

Query: 249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
              +  GE+ +KC+ C+  FS +S+L+ H   +H  EKP   
Sbjct: 3   SGSSGMGEKTWKCRECDMCFSQASSLRLHQN-VHVGEKPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 57.6 bits (140), Expect = 2e-11
 Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 4/42 (9%)

Query: 221 SNNTG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           S+  G K    + C+ C   F ++++L  H   H GE+P   
Sbjct: 5   SSGMGEKT---WKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 40.2 bits (95), Expect = 3e-05
 Identities = 12/30 (40%), Positives = 15/30 (50%)

Query: 281 IHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
               EK +KC  CD CF Q ++L  H   H
Sbjct: 6   SGMGEKTWKCRECDMCFSQASSLRLHQNVH 35

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 67.6 bits (166), Expect = 5e-15
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)

Query: 248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
               + TGE+PY+C  C +SF+  S L  H + IH  EKP   
Sbjct: 2   SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQ-IHTGEKPSGP 43

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 8e-12
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 4/40 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCK 262
           TG KP   Y C  CGK F + + L  H + HTGE+P    
Sbjct: 8   TGEKP---YECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 3e-04
 Identities = 9/35 (25%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 276 RHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
                    EKP++C +C + F +++ L  H + H
Sbjct: 2   SSGS-SGTGEKPYECSICGKSFTKKSQLHVHQQIH 35

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 67.6 bits (166), Expect = 6e-15
 Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 1/42 (2%)

Query: 249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
              +  G  PYKC  CE+SFS    L  H R +H +EKP   
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQR-MHTREKPSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 55.6 bits (135), Expect = 9e-11
 Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 4/42 (9%)

Query: 221 SNNTG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           S+  G  P   Y C  C K F     L  H R HT E+P   
Sbjct: 5   SSGAGVNP---YKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 38.3 bits (90), Expect = 2e-04
 Identities = 8/32 (25%), Positives = 14/32 (43%)

Query: 279 RNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
            +      P+KC  C++ F  +  L  H + H
Sbjct: 4   GSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMH 35

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 67.5 bits (166), Expect = 6e-15
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
               + TGE+P+KC  C + FS  S L  H + +H  EKP   
Sbjct: 2   SSGSSGTGEKPFKCVECGKGFSRRSALNVHHK-LHTGEKPSGP 43

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 58.7 bits (143), Expect = 9e-12
 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           TG KP   + C  CGK F R + L  H + HTGE+P   
Sbjct: 8   TGEKP---FKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 276 RHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
                    EKPFKC  C + F +++ L+ H K H
Sbjct: 2   SSGS-SGTGEKPFKCVECGKGFSRRSALNVHHKLH 35

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 67.5 bits (166), Expect = 7e-15
 Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)

Query: 249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
              +  G++ +KC  C+++F+ SS+L  H R IH  EKP   
Sbjct: 3   SGSSGAGKKLFKCNECKKTFTQSSSLTVHQR-IHTGEKPSGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 1e-11
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
            G K    + C  C K F +S++LT H R HTGE+P   
Sbjct: 8   AGKKL---FKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 1/34 (2%)

Query: 277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
                   +K FKC  C + F Q ++L  H + H
Sbjct: 3   SGS-SGAGKKLFKCNECKKTFTQSSSLTVHQRIH 35

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 67.6 bits (166), Expect = 7e-15
 Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 1/43 (2%)

Query: 248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
               + +GE+P++C+ C + F+ +S+L  H R +H  EKP   
Sbjct: 2   SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQR-VHTGEKPSGP 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 7e-12
 Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           +G KP   + C+ CGK F ++++L  H R HTGE+P   
Sbjct: 8   SGEKP---FQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.1 bits (92), Expect = 8e-05
 Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 276 RHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
                  + EKPF+C  C + F Q ++L  H + H
Sbjct: 2   SSGS-SGSGEKPFQCEECGKRFTQNSHLHSHQRVH 35

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 67.5 bits (166), Expect = 7e-15
 Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 1/42 (2%)

Query: 249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
              + TGE+PY C  C +SF   S+L RH R IH  EKP   
Sbjct: 3   SGSSGTGEKPYICNECGKSFIQKSHLNRHRR-IHTGEKPSGP 43

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.2 bits (147), Expect = 2e-12
 Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           TG KP   Y C  CGK F + ++L RH R HTGE+P   
Sbjct: 8   TGEKP---YICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)

Query: 277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
                   EKP+ C  C + F Q+++L+RH + H
Sbjct: 3   SGS-SGTGEKPYICNECGKSFIQKSHLNRHRRIH 35

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 67.5 bits (166), Expect = 7e-15
 Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 1/42 (2%)

Query: 249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
              + TGE+PYKC  C + F+ +S+L RH   IH  EKP   
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRG-IHTGEKPSGP 43

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.2 bits (147), Expect = 2e-12
 Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           TG KP   Y C  CGKVF ++++L RH   HTGE+P   
Sbjct: 8   TGEKP---YKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%)

Query: 277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
                   EKP+KC  C + F Q ++L RH   H
Sbjct: 3   SGS-SGTGEKPYKCNECGKVFTQNSHLARHRGIH 35

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 67.2 bits (165), Expect = 8e-15
 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)

Query: 249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
              + TGE+PYKC  C +SF+  S L+ H +  H  E+    
Sbjct: 3   SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQK-CHTGERHSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 1e-11
 Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           TG KP   Y C  CGK F   + L  H + HTGE+    
Sbjct: 8   TGEKP---YKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 6e-05
 Identities = 11/34 (32%), Positives = 15/34 (44%), Gaps = 1/34 (2%)

Query: 277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
                   EKP+KC  C + F  ++ L  H K H
Sbjct: 3   SGS-SGTGEKPYKCSDCGKSFTWKSRLRIHQKCH 35

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 67.1 bits (165), Expect = 8e-15
 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)

Query: 249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
              + TG++PYKC  C + F+ +S+L RH   IH  EKP   
Sbjct: 3   SGSSGTGKKPYKCNECGKVFTQNSHLARHRG-IHTGEKPSGP 43

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.2 bits (147), Expect = 3e-12
 Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           TG KP   Y C  CGKVF ++++L RH   HTGE+P   
Sbjct: 8   TGKKP---YKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 1/34 (2%)

Query: 277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
                   +KP+KC  C + F Q ++L RH   H
Sbjct: 3   SGS-SGTGKKPYKCNECGKVFTQNSHLARHRGIH 35

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 67.2 bits (165), Expect = 8e-15
 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)

Query: 249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
              + TG++P++C +C +SF    NL  H R IH  EK    
Sbjct: 3   SGSSGTGQKPFECTHCGKSFRAKGNLVTHQR-IHTGEKSGPS 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 59.5 bits (145), Expect = 5e-12
 Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           TG KP   + C  CGK F    NL  H R HTGE+    
Sbjct: 8   TGQKP---FECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 37.5 bits (88), Expect = 3e-04
 Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 1/34 (2%)

Query: 277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
                   +KPF+C  C + F  + NL  H + H
Sbjct: 3   SGS-SGTGQKPFECTHCGKSFRAKGNLVTHQRIH 35

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 67.2 bits (165), Expect = 8e-15
 Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 1/42 (2%)

Query: 249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
              + +GE+PY C  C ++F   S+L  H++  H +EK    
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHLIEHLK-RHFREKSSGP 43

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.4 bits (150), Expect = 9e-13
 Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           +G +P   Y C  CGK F R ++L  HL+ H  E+    
Sbjct: 8   SGERP---YGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 2e-05
 Identities = 11/31 (35%), Positives = 20/31 (64%)

Query: 280 NIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
           +  + E+P+ C  C + FG+ ++L  HLK+H
Sbjct: 5   SSGSGERPYGCNECGKNFGRHSHLIEHLKRH 35

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 67.2 bits (165), Expect = 8e-15
 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)

Query: 249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
              + TGE+P+ C  C ++FS    L +H R IH  EKP   
Sbjct: 3   SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRR-IHTGEKPSGP 43

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.8 bits (146), Expect = 3e-12
 Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           TG KP   + C  CGK F     L +H R HTGE+P   
Sbjct: 8   TGEKP---FDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 10/34 (29%), Positives = 14/34 (41%), Gaps = 1/34 (2%)

Query: 277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
                   EKPF C  C + F     L++H + H
Sbjct: 3   SGS-SGTGEKPFDCIDCGKAFSDHIGLNQHRRIH 35

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.8 bits (164), Expect = 1e-14
 Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)

Query: 249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
              + TGE+PYKC  C ++F  +S+  +H R +H  ++P   
Sbjct: 3   SGSSGTGEKPYKCMECGKAFGDNSSCTQHQR-LHTGQRPSGP 43

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 6e-12
 Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           TG KP   Y C  CGK F  +++ T+H R HTG++P   
Sbjct: 8   TGEKP---YKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 66.8 bits (164), Expect = 1e-14
 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)

Query: 249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
              + +GE+P+KC+ C + F  +S    H R  H+ EKP   
Sbjct: 3   SGSSGSGEKPFKCEECGKGFYTNSQCYSHQR-SHSGEKPSGP 43

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 59.5 bits (145), Expect = 4e-12
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           +G KP   + C+ CGK F  ++    H R+H+GE+P   
Sbjct: 8   SGEKP---FKCEECGKGFYTNSQCYSHQRSHSGEKPSGP 43

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 10/34 (29%), Positives = 14/34 (41%), Gaps = 1/34 (2%)

Query: 277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
                 + EKPFKC  C + F   +    H + H
Sbjct: 3   SGS-SGSGEKPFKCEECGKGFYTNSQCYSHQRSH 35

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.8 bits (164), Expect = 1e-14
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)

Query: 249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
              + TGE P+ C  C + F+  +NL  H + IH  E+P   
Sbjct: 3   SGSSGTGENPFICSECGKVFTHKTNLIIHQK-IHTGERPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 1e-11
 Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           TG  P   + C  CGKVF    NL  H + HTGE+P   
Sbjct: 8   TGENP---FICSECGKVFTHKTNLIIHQKIHTGERPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 1e-04
 Identities = 12/34 (35%), Positives = 14/34 (41%), Gaps = 1/34 (2%)

Query: 277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
                   E PF C  C + F  +TNL  H K H
Sbjct: 3   SGS-SGTGENPFICSECGKVFTHKTNLIIHQKIH 35

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.8 bits (164), Expect = 1e-14
 Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
               + TGE PY+C  C ++FS    L  H R  H  EKP   
Sbjct: 2   SSGSSGTGENPYECHECGKAFSRKYQLISHQR-THAGEKPSGP 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.6 bits (148), Expect = 2e-12
 Identities = 18/39 (46%), Positives = 19/39 (48%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           TG  P   Y C  CGK F R   L  H RTH GE+P   
Sbjct: 8   TGENP---YECHECGKAFSRKYQLISHQRTHAGEKPSGP 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 3e-04
 Identities = 8/35 (22%), Positives = 14/35 (40%), Gaps = 1/35 (2%)

Query: 276 RHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
                    E P++C  C + F ++  L  H + H
Sbjct: 2   SSGS-SGTGENPYECHECGKAFSRKYQLISHQRTH 35

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.8 bits (164), Expect = 1e-14
 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)

Query: 249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
              + TGE+PYKC  C + F+ +S+L RH R +H   KP   
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRR-VHTGGKPSGP 43

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.2 bits (147), Expect = 3e-12
 Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           TG KP   Y C  CGKVF ++++L RH R HTG +P   
Sbjct: 8   TGEKP---YKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 3e-04
 Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)

Query: 277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
                   EKP+KC  C + F Q ++L RH + H
Sbjct: 3   SGS-SGTGEKPYKCNECGKVFTQNSHLARHRRVH 35

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.4 bits (163), Expect = 1e-14
 Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
              + +GE+PYKC  C + +    +L  H R +H  EK    
Sbjct: 3   SGSSGSGEKPYKCVECGKGYKRRLDLDFHQR-VHTGEKLSGP 43

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.9 bits (146), Expect = 4e-12
 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           +G KP   Y C  CGK + R  +L  H R HTGE+    
Sbjct: 8   SGEKP---YKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 4e-05
 Identities = 10/34 (29%), Positives = 18/34 (52%), Gaps = 1/34 (2%)

Query: 277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
                 + EKP+KC  C + + ++ +LD H + H
Sbjct: 3   SGS-SGSGEKPYKCVECGKGYKRRLDLDFHQRVH 35

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.4 bits (163), Expect = 2e-14
 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)

Query: 249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
              + +GE+PY C  C ++FS  S L  H R  H  EKP   
Sbjct: 3   SGSSGSGEKPYGCNECGKTFSQKSILSAHQR-THTGEKPSGP 43

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.9 bits (146), Expect = 4e-12
 Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           +G KP   Y C  CGK F + + L+ H RTHTGE+P   
Sbjct: 8   SGEKP---YGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 5e-04
 Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 1/34 (2%)

Query: 277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
                 + EKP+ C  C + F Q++ L  H + H
Sbjct: 3   SGS-SGSGEKPYGCNECGKTFSQKSILSAHQRTH 35

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.4 bits (163), Expect = 2e-14
 Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 1/42 (2%)

Query: 249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
              + TGE+PY+C  C +SF   S L  H R IH  E P   
Sbjct: 3   SGSSGTGEKPYECSDCGKSFIKKSQLHVHQR-IHTGENPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 1e-11
 Identities = 18/39 (46%), Positives = 20/39 (51%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           TG KP   Y C  CGK F + + L  H R HTGE P   
Sbjct: 8   TGEKP---YECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 7e-04
 Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 1/34 (2%)

Query: 277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
                   EKP++C  C + F +++ L  H + H
Sbjct: 3   SGS-SGTGEKPYECSDCGKSFIKKSQLHVHQRIH 35

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.4 bits (163), Expect = 2e-14
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
               + TGE+ Y+C  C ++F+  S L  H R IH  EKP   
Sbjct: 2   SSGSSGTGERHYECSECGKAFARKSTLIMHQR-IHTGEKPSGP 43

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 1e-11
 Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           TG +    Y C  CGK F R + L  H R HTGE+P   
Sbjct: 8   TGERH---YECSECGKAFARKSTLIMHQRIHTGEKPSGP 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 66.4 bits (163), Expect = 2e-14
 Identities = 12/43 (27%), Positives = 18/43 (41%), Gaps = 1/43 (2%)

Query: 248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
               + +GE+PY+C  C ++F   S L  H R  H        
Sbjct: 2   SSGSSGSGEKPYECNECGKAFIWKSLLIVHER-THAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 56.4 bits (137), Expect = 6e-11
 Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           +G KP   Y C  CGK F   + L  H RTH G      
Sbjct: 8   SGEKP---YECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 36.4 bits (85), Expect = 7e-04
 Identities = 9/35 (25%), Positives = 16/35 (45%), Gaps = 1/35 (2%)

Query: 276 RHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
                  + EKP++C  C + F  ++ L  H + H
Sbjct: 2   SSGS-SGSGEKPYECNECGKAFIWKSLLIVHERTH 35

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.0 bits (162), Expect = 2e-14
 Identities = 12/43 (27%), Positives = 23/43 (53%), Gaps = 1/43 (2%)

Query: 248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
               + +G++PY+CK C ++F    +L +H R +H  E+    
Sbjct: 2   SSGSSGSGKKPYECKECRKTFIQIGHLNQHKR-VHTGERSSGP 43

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.0 bits (149), Expect = 1e-12
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 4/43 (9%)

Query: 221 SNNTG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCK 262
           S+ +G KP   Y CK C K F +  +L +H R HTGE+     
Sbjct: 5   SSGSGKKP---YECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 4e-04
 Identities = 9/32 (28%), Positives = 19/32 (59%)

Query: 279 RNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
            +  + +KP++C  C + F Q  +L++H + H
Sbjct: 4   GSSGSGKKPYECKECRKTFIQIGHLNQHKRVH 35

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 67.3 bits (164), Expect = 3e-14
 Identities = 16/69 (23%), Positives = 21/69 (30%), Gaps = 10/69 (14%)

Query: 231 YACKFCGKVFPRSANLTRHL-RTHTGEQPYKCKYCE--------RSFSISSNLQRHVRNI 281
              K C + F     L  H+   H G        C         +SF     L  H+R +
Sbjct: 26  RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIR-V 84

Query: 282 HNKEKPFKC 290
           H  EK    
Sbjct: 85  HTGEKSGPS 93

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 56.9 bits (137), Expect = 1e-10
 Identities = 15/67 (22%), Positives = 22/67 (32%), Gaps = 8/67 (11%)

Query: 252 THTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFK--------CPLCDRCFGQQTNL 303
               +     K C+R+FS    L  HV   H               CP   + F  +  L
Sbjct: 19  IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78

Query: 304 DRHLKKH 310
             H++ H
Sbjct: 79  VNHIRVH 85

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 51.5 bits (123), Expect = 1e-08
 Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 5/42 (11%)

Query: 225 GKPKDRYACKF-----CGKVFPRSANLTRHLRTHTGEQPYKC 261
           G  ++ + C +      GK F     L  H+R HTGE+    
Sbjct: 52  GPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPS 93

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.6 bits (161), Expect = 3e-14
 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)

Query: 249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
              + TGE+ Y+C  C ++F   S L  H R IH  EKP   
Sbjct: 3   SGSSGTGERHYECSECGKAFIQKSTLSMHQR-IHRGEKPSGP 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 8e-12
 Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           TG +    Y C  CGK F + + L+ H R H GE+P   
Sbjct: 8   TGERH---YECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.6 bits (161), Expect = 3e-14
 Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 1/43 (2%)

Query: 248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
               + TG + ++C  C ++F+  S L  H + IH  EKP   
Sbjct: 2   SSGSSGTGGKHFECTECGKAFTRKSTLSMHQK-IHTGEKPSGP 43

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 7e-12
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           TG K    + C  CGK F R + L+ H + HTGE+P   
Sbjct: 8   TGGKH---FECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 7e-04
 Identities = 9/35 (25%), Positives = 14/35 (40%), Gaps = 1/35 (2%)

Query: 276 RHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
                     K F+C  C + F +++ L  H K H
Sbjct: 2   SSGS-SGTGGKHFECTECGKAFTRKSTLSMHQKIH 35

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 65.2 bits (160), Expect = 4e-14
 Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 1/40 (2%)

Query: 249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPF 288
              +  GE+PY C+ C   F     L+ H+R IH    P 
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHLR-IHTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 55.6 bits (135), Expect = 9e-11
 Identities = 16/37 (43%), Positives = 17/37 (45%), Gaps = 4/37 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPY 259
            G KP   Y C+ CG  F     L  HLR HTG  P 
Sbjct: 7   GGEKP---YPCEICGTRFRHLQTLKSHLRIHTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 10/29 (34%), Positives = 13/29 (44%)

Query: 282 HNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
              EKP+ C +C   F     L  HL+ H
Sbjct: 6   SGGEKPYPCEICGTRFRHLQTLKSHLRIH 34

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 64.9 bits (159), Expect = 5e-14
 Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPF 288
              +  GE+PYKC+ C   F   ++L+ HV  IH    P 
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVL-IHTGSGPS 40

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 56.0 bits (136), Expect = 7e-11
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 4/37 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPY 259
            G KP   Y C+ CG  F + A+L  H+  HTG  P 
Sbjct: 7   GGEKP---YKCETCGARFVQVAHLRAHVLIHTGSGPS 40

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 39.4 bits (93), Expect = 6e-05
 Identities = 11/30 (36%), Positives = 14/30 (46%)

Query: 281 IHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
               EKP+KC  C   F Q  +L  H+  H
Sbjct: 5   SSGGEKPYKCETCGARFVQVAHLRAHVLIH 34

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.2 bits (160), Expect = 5e-14
 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)

Query: 248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
               + +GE+P+KC  C + F   S+L  H+R +H++EK    
Sbjct: 2   SSGSSGSGERPFKCNECGKGFGRRSHLAGHLR-LHSREKSSGP 43

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 2e-11
 Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           +G +P   + C  CGK F R ++L  HLR H+ E+    
Sbjct: 8   SGERP---FKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.1 bits (92), Expect = 9e-05
 Identities = 12/32 (37%), Positives = 21/32 (65%)

Query: 279 RNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
            +  + E+PFKC  C + FG++++L  HL+ H
Sbjct: 4   GSSGSGERPFKCNECGKGFGRRSHLAGHLRLH 35

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.9 bits (159), Expect = 5e-14
 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)

Query: 249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
              +  GE+PY+C  C +SFS S  L +H    H +EKP   
Sbjct: 3   SGSSGEGEKPYQCSECGKSFSGSYRLTQHWI-THTREKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.5 bits (145), Expect = 5e-12
 Identities = 18/39 (46%), Positives = 20/39 (51%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
            G KP   Y C  CGK F  S  LT+H  THT E+P   
Sbjct: 8   EGEKP---YQCSECGKSFSGSYRLTQHWITHTREKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 8e-04
 Identities = 9/32 (28%), Positives = 14/32 (43%)

Query: 279 RNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
            +    EKP++C  C + F     L +H   H
Sbjct: 4   GSSGEGEKPYQCSECGKSFSGSYRLTQHWITH 35

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 64.9 bits (159), Expect = 7e-14
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%)

Query: 248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
               +  GE+ ++C  C + F  +SN  +H R IH  EKP   
Sbjct: 2   SSGSSGHGERGHRCSDCGKFFLQASNFIQHRR-IHTGEKPSGP 43

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 55.6 bits (135), Expect = 1e-10
 Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
            G +    + C  CGK F +++N  +H R HTGE+P   
Sbjct: 8   HGERG---HRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 39.1 bits (92), Expect = 7e-05
 Identities = 8/32 (25%), Positives = 16/32 (50%)

Query: 279 RNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
            +  + E+  +C  C + F Q +N  +H + H
Sbjct: 4   GSSGHGERGHRCSDCGKFFLQASNFIQHRRIH 35

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 66.3 bits (161), Expect = 1e-13
 Identities = 16/86 (18%), Positives = 26/86 (30%), Gaps = 6/86 (6%)

Query: 230 RYACKFCGKVFPRSANLTRHLR-----THTGEQPYKCKYCERSFSISSNLQRHVRNIHNK 284
           ++ CK C   +     LT H+           +         S     +L        + 
Sbjct: 19  KFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGK-EDA 77

Query: 285 EKPFKCPLCDRCFGQQTNLDRHLKKH 310
           +K  KC  C   F    +L  H+ K 
Sbjct: 78  QKVLKCMYCGHSFESLQDLSVHMIKT 103

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 58.2 bits (140), Expect = 9e-11
 Identities = 11/74 (14%), Positives = 23/74 (31%), Gaps = 2/74 (2%)

Query: 242 RSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQT 301
             ++   +    TG   ++CK C  ++     L  H+               D    ++ 
Sbjct: 3   SGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMN--ETGHYRDDNHETDNNNPKRW 60

Query: 302 NLDRHLKKHEADGP 315
           +  R     E +G 
Sbjct: 61  SKPRKRSLLEMEGK 74

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 51.3 bits (122), Expect = 2e-08
 Identities = 12/67 (17%), Positives = 21/67 (31%), Gaps = 1/67 (1%)

Query: 224 TGKPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRH-VRNIH 282
                +           PR  +L         ++  KC YC  SF    +L  H ++  H
Sbjct: 46  RDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKH 105

Query: 283 NKEKPFK 289
            ++    
Sbjct: 106 YQKVSGP 112

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.7 bits (156), Expect = 1e-13
 Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 1/43 (2%)

Query: 248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
               + TGE+P KC  C ++F   S L  H R  H  +K    
Sbjct: 2   SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQR-THVDDKHSGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.0 bits (141), Expect = 2e-11
 Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 4/42 (9%)

Query: 221 SNNTG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           S+ TG KP     C  CGK F   + L  H RTH  ++    
Sbjct: 5   SSGTGEKP---CKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 8e-04
 Identities = 10/32 (31%), Positives = 15/32 (46%)

Query: 279 RNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
            +    EKP KC  C + F  ++ L  H + H
Sbjct: 4   GSSGTGEKPCKCTECGKAFCWKSQLIMHQRTH 35

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 62.6 bits (153), Expect = 3e-13
 Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
               + +  + ++C  C R F++ S+L +H R IH  EKP   
Sbjct: 2   SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQR-IHTGEKPSGP 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 54.1 bits (131), Expect = 4e-10
 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 4/42 (9%)

Query: 221 SNNTG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           S+ +  K    + C  CG+ F   ++L +H R HTGE+P   
Sbjct: 5   SSGSSTKS---HQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 8/30 (26%), Positives = 16/30 (53%)

Query: 281 IHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
             +  K  +C  C R F  +++L++H + H
Sbjct: 6   SGSSTKSHQCHECGRGFTLKSHLNQHQRIH 35

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 61.8 bits (151), Expect = 7e-13
 Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 1/40 (2%)

Query: 249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPF 288
              +  GE+PY+C  C ++FS   +L  H+R +H    P 
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIR-VHTGSGPS 40

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 52.2 bits (126), Expect = 2e-09
 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 4/37 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPY 259
            G KP   Y C  CGK F +  +L  H+R HTG  P 
Sbjct: 7   GGEKP---YRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 1/39 (2%)

Query: 277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGP 315
                   EKP++C  C + F Q+ +L  H++ H   GP
Sbjct: 2   SSG-SSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGP 39

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 61.0 bits (149), Expect = 1e-12
 Identities = 12/40 (30%), Positives = 17/40 (42%), Gaps = 1/40 (2%)

Query: 251 RTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
              +GE PY+C  C ++F+    L  H R  H  E     
Sbjct: 3   SGSSGENPYECSECGKAFNRKDQLISHQR-THAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 59.1 bits (144), Expect = 5e-12
 Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           +G  P   Y C  CGK F R   L  H RTH GE     
Sbjct: 6   SGENP---YECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 60.6 bits (148), Expect = 2e-12
 Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
              + TGE PY+C  C + FS    L  H +  H+ +     
Sbjct: 3   SGSSGTGENPYECCECGKVFSRKDQLVSHQK-THSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 57.1 bits (139), Expect = 3e-11
 Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 4/42 (9%)

Query: 221 SNNTG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           S+ TG  P   Y C  CGKVF R   L  H +TH+G+     
Sbjct: 5   SSGTGENP---YECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 60.6 bits (148), Expect = 2e-12
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)

Query: 251 RTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
              +GE+P+ C  CE++FS  S L  H +  H +EKP   
Sbjct: 3   SGSSGEKPFGCSCCEKAFSSKSYLLVHQQ-THAEEKPSGP 41

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 58.7 bits (143), Expect = 8e-12
 Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 4/42 (9%)

Query: 221 SNNTG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           S ++G KP   + C  C K F   + L  H +TH  E+P   
Sbjct: 3   SGSSGEKP---FGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 10/30 (33%), Positives = 16/30 (53%)

Query: 281 IHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
             + EKPF C  C++ F  ++ L  H + H
Sbjct: 4   GSSGEKPFGCSCCEKAFSSKSYLLVHQQTH 33

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 59.5 bits (145), Expect = 5e-12
 Identities = 10/42 (23%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
              + T  + Y C  C ++F+   +L RH + IH ++     
Sbjct: 3   SGSSGTDSKSYNCNECGKAFTRIFHLTRHQK-IHTRKSGPSS 43

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 53.4 bits (129), Expect = 7e-10
 Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           T  K    Y C  CGK F R  +LTRH + HT +     
Sbjct: 8   TDSKS---YNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 38.7 bits (91), Expect = 9e-05
 Identities = 9/30 (30%), Positives = 13/30 (43%)

Query: 281 IHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
                K + C  C + F +  +L RH K H
Sbjct: 6   SGTDSKSYNCNECGKAFTRIFHLTRHQKIH 35

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 62.3 bits (150), Expect = 5e-12
 Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 5/86 (5%)

Query: 201 LIRSQLPPLANSPKQFQES---ISNNTGKPKDRYACKFCGKVFPRSANLTRHLRTHTGEQ 257
           LIR+ +  L ++P+   ES         K   ++ C  C   F  S +L +H+R    E 
Sbjct: 42  LIRAIVKTLIHNPQLLDESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EH 99

Query: 258 PYKCKYCERSFSISSNLQRHVRNIHN 283
              C  C++ F+ + +   HV   HN
Sbjct: 100 TKVCPVCKKEFTSTDSALDHVCKKHN 125

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 56.9 bits (136), Expect = 3e-10
 Identities = 16/71 (22%), Positives = 27/71 (38%), Gaps = 3/71 (4%)

Query: 240 FPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQ 299
               ++    L        + C  C   FS S +L++H+R     E    CP+C + F  
Sbjct: 56  LLDESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRY---TEHTKVCPVCKKEFTS 112

Query: 300 QTNLDRHLKKH 310
             +   H+ K 
Sbjct: 113 TDSALDHVCKK 123

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 41.1 bits (95), Expect = 1e-04
 Identities = 18/94 (19%), Positives = 28/94 (29%), Gaps = 2/94 (2%)

Query: 218 ESISNNTGKPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRH 277
           +S S                +   R   LT   +           +  +    SS L R 
Sbjct: 7   DSGSKKYLSNHKGIFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRL 66

Query: 278 VRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHE 311
           +         F CPLC   F    +L +H++  E
Sbjct: 67  LA--SKAISQFVCPLCLMPFSSSVSLKQHIRYTE 98

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 59.7 bits (144), Expect = 7e-12
 Identities = 13/69 (18%), Positives = 24/69 (34%), Gaps = 8/69 (11%)

Query: 242 RSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQT 301
            S +  +  + H G++  KC  C   F   S          ++ K   C  C +   Q+ 
Sbjct: 2   SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRST--------LSRRKTPMCEKCRKDSCQEA 53

Query: 302 NLDRHLKKH 310
            L++     
Sbjct: 54  ALNKDEGNE 62

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 45.4 bits (107), Expect = 1e-06
 Identities = 11/58 (18%), Positives = 21/58 (36%), Gaps = 8/58 (13%)

Query: 231 YACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPF 288
             C  CG +F R + L+R        +   C+ C +     + L +      + +K  
Sbjct: 19  QKCSKCGIIFIRRSTLSRR-------KTPMCEKCRKDSCQEAALNKDEG-NESGKKTS 68

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 42.0 bits (98), Expect = 2e-05
 Identities = 8/46 (17%), Positives = 16/46 (34%), Gaps = 3/46 (6%)

Query: 214 KQFQESISNNTGKPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPY 259
             F    + +  K      C+ C K   + A L +     +G++  
Sbjct: 26  IIFIRRSTLSRRKT---PMCEKCRKDSCQEAALNKDEGNESGKKTS 68

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 58.0 bits (141), Expect = 2e-11
 Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
              + +GE+ + C  C ++F   S L+ H R +H  EK    
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIHQR-VHMGEKCSGP 43

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 49.9 bits (120), Expect = 1e-08
 Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           +G K    + C  CGK F   + L  H R H GE+    
Sbjct: 8   SGEKS---HTCDECGKNFCYISALRIHQRVHMGEKCSGP 43

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 57.2 bits (139), Expect = 3e-11
 Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 4/40 (10%)

Query: 221 SNNTG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPY 259
           S ++G +    Y C+ CGK F +  +LT H R HTG  P 
Sbjct: 3   SGSSGQRV---YECQECGKSFRQKGSLTLHERIHTGSGPS 39

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 53.7 bits (130), Expect = 4e-10
 Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 1/38 (2%)

Query: 251 RTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPF 288
              +G++ Y+C+ C +SF    +L  H R IH    P 
Sbjct: 3   SGSSGQRVYECQECGKSFRQKGSLTLHER-IHTGSGPS 39

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 56.4 bits (135), Expect = 3e-10
 Identities = 19/84 (22%), Positives = 26/84 (30%), Gaps = 4/84 (4%)

Query: 226 KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKE 285
           + K+ Y C+ C            H R         C YC   F      Q H      + 
Sbjct: 12  ENKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHES--KCEY 67

Query: 286 KPFKCPLCDRCFGQQTNLDRHLKK 309
           K   C  C R F    ++ RH  +
Sbjct: 68  KKLTCLECMRTFKSSFSIWRHQVE 91

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 45.7 bits (107), Expect = 2e-06
 Identities = 13/58 (22%), Positives = 23/58 (39%), Gaps = 1/58 (1%)

Query: 228 KDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKE 285
           ++   C +C   F        H  +    +   C  C R+F  S ++ RH   +HN+ 
Sbjct: 40  RNAAVCPYCSLRFFSPELKQEH-ESKCEYKKLTCLECMRTFKSSFSIWRHQVEVHNQN 96

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 44.5 bits (104), Expect = 4e-06
 Identities = 14/57 (24%), Positives = 18/57 (31%), Gaps = 3/57 (5%)

Query: 255 GEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHE 311
            ++ Y+C+ C    S       H R   N      CP C   F        H  K E
Sbjct: 13  NKEVYQCRLCNAKLSSLLEQGSHERLCRNA---AVCPYCSLRFFSPELKQEHESKCE 66

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 54.2 bits (131), Expect = 3e-10
 Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 1/41 (2%)

Query: 249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFK 289
              +  GE PY C  C +SF+   +L  H R   ++  P  
Sbjct: 2   SSGSSGGETPYLCGQCGKSFTQRGSLAVHQR-SCSQSGPSS 41

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 48.4 bits (116), Expect = 4e-08
 Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 3/35 (8%)

Query: 226 KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYK 260
            P   Y C  CGK F +  +L  H R+ +   P  
Sbjct: 10  TP---YLCGQCGKSFTQRGSLAVHQRSCSQSGPSS 41

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 36.1 bits (84), Expect = 7e-04
 Identities = 10/34 (29%), Positives = 15/34 (44%)

Query: 282 HNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGP 315
              E P+ C  C + F Q+ +L  H +     GP
Sbjct: 6   SGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGP 39

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 53.5 bits (129), Expect = 5e-10
 Identities = 11/40 (27%), Positives = 21/40 (52%), Gaps = 1/40 (2%)

Query: 251 RTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC 290
              +GE+PY C  C+ +FS ++ L +H + +H  +     
Sbjct: 3   SGSSGEKPYSCAECKETFSDNNRLVQHQK-MHTVKSGPSS 41

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 48.5 bits (116), Expect = 4e-08
 Identities = 11/39 (28%), Positives = 18/39 (46%), Gaps = 4/39 (10%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKC 261
           +G KP   Y+C  C + F  +  L +H + HT +     
Sbjct: 6   SGEKP---YSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 52.7 bits (127), Expect = 1e-09
 Identities = 13/31 (41%), Positives = 19/31 (61%)

Query: 249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVR 279
             R  TG +P++C  C+RSFS S +L  H +
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRK 32

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 43.9 bits (104), Expect = 1e-06
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)

Query: 277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
             R      KPF+CP CDR F +  +L  H K+H
Sbjct: 2   STR-GSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 38.9 bits (91), Expect = 7e-05
 Identities = 8/24 (33%), Positives = 12/24 (50%)

Query: 230 RYACKFCGKVFPRSANLTRHLRTH 253
            + C  C + F RS +L  H + H
Sbjct: 11  PFQCPDCDRSFSRSDHLALHRKRH 34

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 52.6 bits (126), Expect = 1e-09
 Identities = 15/41 (36%), Positives = 25/41 (60%)

Query: 224 TGKPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYC 264
           +G+ + + AC+ CGK+F    +L RH  +H+GE+PY     
Sbjct: 6   SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 48.0 bits (114), Expect = 5e-08
 Identities = 10/43 (23%), Positives = 17/43 (39%), Gaps = 1/43 (2%)

Query: 251 RTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLC 293
            +    +   C+ C + F    +L RH    H+ EKP+     
Sbjct: 5   SSGRTRKQVACEICGKIFRDVYHLNRHKL-SHSGEKPYSSGPS 46

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A Length = 31

 Score = 48.0 bits (115), Expect = 4e-08
 Identities = 16/28 (57%), Positives = 18/28 (64%), Gaps = 2/28 (7%)

Query: 231 YAC--KFCGKVFPRSANLTRHLRTHTGE 256
           + C   +CGK F RS  L RH RTHTGE
Sbjct: 3   FMCTWSYCGKRFTRSDELQRHKRTHTGE 30

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A Length = 31

 Score = 37.6 bits (88), Expect = 2e-04
 Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 3/31 (9%)

Query: 258 PYKCKY--CERSFSISSNLQRHVRNIHNKEK 286
           P+ C +  C + F+ S  LQRH R  H  EK
Sbjct: 2   PFMCTWSYCGKRFTRSDELQRHKR-THTGEK 31

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 46.8 bits (111), Expect = 1e-07
 Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKP 287
               +  GE P+KC  C+R F+  + L +H R  H ++  
Sbjct: 2   SSGSSGAGENPFKCSKCDRVFTQRNYLVQHER-THARKSG 40

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 42.2 bits (99), Expect = 5e-06
 Identities = 13/29 (44%), Positives = 16/29 (55%)

Query: 282 HNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
              E PFKC  CDR F Q+  L +H + H
Sbjct: 7   GAGENPFKCSKCDRVFTQRNYLVQHERTH 35

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 40.6 bits (95), Expect = 2e-05
 Identities = 9/28 (32%), Positives = 14/28 (50%)

Query: 231 YACKFCGKVFPRSANLTRHLRTHTGEQP 258
           + C  C +VF +   L +H RTH  +  
Sbjct: 13  FKCSKCDRVFTQRNYLVQHERTHARKSG 40

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 102

 Score = 47.1 bits (111), Expect = 5e-07
 Identities = 14/76 (18%), Positives = 24/76 (31%), Gaps = 3/76 (3%)

Query: 245 NLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIH---NKEKPFKCPLCDRCFGQQT 301
           +   + +    E  Y+CKYC       +    HV + H        + C  C+    +  
Sbjct: 5   HHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYD 64

Query: 302 NLDRHLKKHEADGPTI 317
            L  H  K+       
Sbjct: 65  ALSEHNLKYHPGEENF 80

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 102

 Score = 45.1 bits (106), Expect = 2e-06
 Identities = 19/74 (25%), Positives = 25/74 (33%), Gaps = 4/74 (5%)

Query: 226 KPKDRYACKFCGKVFPRSANLTRHLRT-HTG---EQPYKCKYCERSFSISSNLQRHVRNI 281
           K +  Y CK+C    P     T H+ + H        Y C  C         L  H    
Sbjct: 14  KVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKY 73

Query: 282 HNKEKPFKCPLCDR 295
           H  E+ FK  +  R
Sbjct: 74  HPGEENFKLTMVKR 87

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A Length = 29

 Score = 44.2 bits (105), Expect = 8e-07
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query: 231 YACKFCGKVFPRSANLTRHLRTHTGE 256
           + C+ C + F R  +L RH R+HT E
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNE 28

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A Length = 29

 Score = 38.8 bits (91), Expect = 7e-05
 Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 1/29 (3%)

Query: 258 PYKCKYCERSFSISSNLQRHVRNIHNKEK 286
            + C+ C R+F+   +L+RH R  H  EK
Sbjct: 2   SFVCEVCTRAFARQEHLKRHYR-SHTNEK 29

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A Length = 29

 Score = 36.9 bits (86), Expect = 3e-04
 Identities = 10/25 (40%), Positives = 15/25 (60%)

Query: 286 KPFKCPLCDRCFGQQTNLDRHLKKH 310
           + F C +C R F +Q +L RH + H
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSH 25

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens} Length = 37

 Score = 42.0 bits (99), Expect = 6e-06
 Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 3/36 (8%)

Query: 223 NTGKPKDRYACKF--CGKVFPRSANLTRHLRTHTGE 256
           + GK K ++ C    CGKV+ ++++L  HLR HTGE
Sbjct: 2   DPGKKK-QHICHIQGCGKVYGKTSHLRAHLRWHTGE 36

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 98

 Score = 39.2 bits (90), Expect = 2e-04
 Identities = 12/64 (18%), Positives = 24/64 (37%), Gaps = 2/64 (3%)

Query: 226 KPKDRYACKFCGKVFPRS-ANLTRHLRT-HTGEQPYKCKYCERSFSISSNLQRHVRNIHN 283
             +    C  C  V  ++   L +H+      +   KC++C + F   + L  H    H+
Sbjct: 20  HERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHS 79

Query: 284 KEKP 287
            +  
Sbjct: 80  AKPS 83

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 Length = 47

 Score = 37.1 bits (86), Expect = 4e-04
 Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 3/43 (6%)

Query: 217 QESISNNTGKPKDR-YACKF--CGKVFPRSANLTRHLRTHTGE 256
           + SI     +  D+ + C F  C K F R  N+  H++TH  +
Sbjct: 4   RGSIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED 46

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1 Length = 35

 Score = 37.0 bits (85), Expect = 4e-04
 Identities = 8/27 (29%), Positives = 18/27 (66%)

Query: 253 HTGEQPYKCKYCERSFSISSNLQRHVR 279
            +G++P+ C+ C  +F+  +N  RH++
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLK 28

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 36

 Score = 36.8 bits (84), Expect = 4e-04
 Identities = 12/27 (44%), Positives = 17/27 (62%)

Query: 231 YACKFCGKVFPRSANLTRHLRTHTGEQ 257
           + C++C KVF    +L  HLR HT E+
Sbjct: 10  FTCEYCNKVFKFKHSLQAHLRIHTNEK 36

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens} Length = 30

 Score = 36.7 bits (84), Expect = 5e-04
 Identities = 16/30 (53%), Positives = 20/30 (66%), Gaps = 1/30 (3%)

Query: 257 QPYKCKYCERSFSISSNLQRHVRNIHNKEK 286
           +PY C +C+R F+    LQRHVR IH  EK
Sbjct: 2   KPYVCIHCQRQFADPGALQRHVR-IHTGEK 30

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.8 bits (97), Expect = 5e-04
 Identities = 58/515 (11%), Positives = 113/515 (21%), Gaps = 196/515 (38%)

Query: 46  HNGPHMSPAGKPPSSPDSERHEEQP------LDLRVDHKKVFLSRNMEDENRNL------ 93
           H+  HM          D E  E Q                 F  ++++D  +++      
Sbjct: 2   HHHHHM----------DFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEI 51

Query: 94  --ILRSPTPSENLEVNY---RSSPAST----------------KDELQVQDDDRSSPPNI 132
             I+ S          +    S                        ++ +    S    +
Sbjct: 52  DHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRM 111

Query: 133 ----KSRSLSTYPVLFPHPVM-LEAMYRARDKVPRL-PLP----YSMNSPPG-------- 174
               + R  +   V   + V  L+   + R  +  L P        +    G        
Sbjct: 112 YIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGV---LGSGKTWVAL 168

Query: 175 -----YPGRPAYPF----INSGLLNGHPIQSPTIDLIR-----SQLPPLANSPKQFQESI 220
                Y  +    F    +N    N     SP   L        Q+ P   S      +I
Sbjct: 169 DVCLSYKVQCKMDFKIFWLNLKNCN-----SPETVLEMLQKLLYQIDPNWTSRSDHSSNI 223

Query: 221 SNNTGKPKDRYACKFCGKVFPRSANL--------TRHLRTHTGEQPYKCK------YCER 266
                  +         K +     L         +            CK      + + 
Sbjct: 224 KLRIHSIQAELRRLLKSKPYENC--LLVLLNVQNAKAWNAFNL----SCKILLTTRFKQV 277

Query: 267 SFSISSNLQRHVRNIHNKEKPF----------KC----------------PLCDRCFG-- 298
           +  +S+    H+   H+               K                 P         
Sbjct: 278 TDFLSAATTTHISLDHH-SMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAES 336

Query: 299 -----------QQTNLDRHLKKHEAD----GPTIL-----------DDRNGGIPSPSMIH 332
                      +  N D+     E+      P                 +  IP+  +  
Sbjct: 337 IRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAH--IPTILL-- 392

Query: 333 NRCRPPSGILNDDSYFEEIRSFMGKVSADGNRLVQRVSSLSR--ANYNYYLPH-----QE 385
                   ++  D    ++   +       N+L +  S + +        +P      + 
Sbjct: 393 -------SLIWFDVIKSDVMVVV-------NKLHKY-SLVEKQPKESTISIPSIYLELKV 437

Query: 386 DAENNNNINSK------------KEILSPSEKDNY 408
             EN   ++               + L P   D Y
Sbjct: 438 KLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQY 472

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 Length = 33

 Score = 36.4 bits (84), Expect = 6e-04
 Identities = 10/31 (32%), Positives = 17/31 (54%)

Query: 230 RYACKFCGKVFPRSANLTRHLRTHTGEQPYK 260
           ++AC  C K F RS +L++H+  H      +
Sbjct: 2   KFACPECPKRFMRSDHLSKHITLHELLGEER 32

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 96

 Score = 37.9 bits (87), Expect = 6e-04
 Identities = 14/84 (16%), Positives = 30/84 (35%), Gaps = 7/84 (8%)

Query: 207 PPLANSPKQFQESISNNTGKPKDRYACKFCGKVFPRS-ANLTRHLRTHTGEQPYKCKYCE 265
               +  +Q+   I       K   +C  C  V  ++   L +H+     ++ + C +C 
Sbjct: 16  YAAGSLEEQWYLEI-----VDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCG 69

Query: 266 RSFSISSNLQRHVRNIHNKEKPFK 289
           +     + ++ HV   HN      
Sbjct: 70  KQLRSLAGMKYHVMANHNSLPSGP 93

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 Length = 30

 Score = 36.0 bits (83), Expect = 7e-04
 Identities = 10/24 (41%), Positives = 15/24 (62%)

Query: 286 KPFKCPLCDRCFGQQTNLDRHLKK 309
           K + C LC+R F ++  L RH +K
Sbjct: 1   KAYACGLCNRAFTRRDLLIRHAQK 24

>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_V Length = 1275

 Score = 41.0 bits (95), Expect = 7e-04
 Identities = 25/213 (11%), Positives = 48/213 (22%), Gaps = 16/213 (7%)

Query: 43  TRSHNGPHMSPAGK--PPSSPDSERHEEQPLDLRVDHKKVFLSRNMEDENRNLILRSPTP 100
            R   G            S   S +  ++      ++K    +      NR      P  
Sbjct: 5   PRKTKGKSSGKGNDSTERSDDGSSQLRDKQ-----NNKAGPATTEPGTSNREQYRARPGI 59

Query: 101 SENLEVNYRSSPASTKDELQVQDDDRSSPPNIKSRSLSTYPVLFPHPVMLEAMYRARDKV 160
           +        +      ++    D   ++  +      S            +A    + K 
Sbjct: 60  ASVQRATESAELPMKNNDEGTPDKKGNTRGD-LVNEHSEAKDEADEATQKQAKDTDKSKA 118

Query: 161 PRLPLPYSMNSPPGYPGRPAYPFINSGLLNGHPIQSPTIDLIRSQLPPLANSPKQFQESI 220
                              +    N G  N  P+ +       ++      S        
Sbjct: 119 Q--VTYSDTGINNANELSRSGNVDNEGGSNQKPMSTRI-----AEATSAIVSKHP-ARVG 170

Query: 221 SNNTGKPKDRYACKFCGKVFPRSANLTRHLRTH 253
              T      Y C  C  V     +L  H+ +H
Sbjct: 171 LPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 36

 Score = 36.0 bits (82), Expect = 7e-04
 Identities = 12/28 (42%), Positives = 17/28 (60%)

Query: 286 KPFKCPLCDRCFGQQTNLDRHLKKHEAD 313
           KP+KCP C      + NL+ HL+KH  +
Sbjct: 8   KPYKCPQCSYASAIKANLNVHLRKHTGE 35

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A Length = 29

 Score = 35.6 bits (82), Expect = 8e-04
 Identities = 11/28 (39%), Positives = 17/28 (60%)

Query: 230 RYACKFCGKVFPRSANLTRHLRTHTGEQ 257
           ++AC  C K F RS +LT H+  H  ++
Sbjct: 2   KFACPECPKRFMRSDHLTLHILLHENKK 29

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	447
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.91
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.89
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.88
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.87
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.86
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.86
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.85
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.85
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.82
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.81
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.81
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.81
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.78
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.77
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.75
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.74
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.73
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.72
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.72
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.7
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.69
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.69
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.68
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.67
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.67
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.66
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.66
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.64
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.64
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.63
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.62
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.62
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.61
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.59
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.57
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.57
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.57
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.57
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.56
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.53
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.53
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.53
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.52
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.52
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.47
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.47
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.47
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.45
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.43
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.42
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.42
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.41
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.4
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.39
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.39
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.38
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.36
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.36
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.35
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.35
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.33
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.32
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.32
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.3
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.28
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.27
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.26
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.26
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.26
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.26
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.26
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.25
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.25
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.23
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.22
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.2
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.17
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.17
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.17
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.12
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.09
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.06
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.05
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.01
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.0
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.0
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.99
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.99
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.99
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.99
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.99
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.99
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.99
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.99
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.99
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.99
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.99
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.99
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.99
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.98
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.98
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.98
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.98
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.98
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.98
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.98
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.98
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.98
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.98
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.98
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.98
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.97
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.97
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.97
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.97
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.97
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.97
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.97
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.97
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.97
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.97
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.97
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.97
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.97
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.97
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.97
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.97
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.97
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.97
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.96
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.96
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.96
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.96
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.96
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.96
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.96
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.96
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.96
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.96
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.96
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.96
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.95
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.95
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.95
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.95
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.95
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.95
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.95
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.95
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.95
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.95
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.95
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.95
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.95
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.95
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.95
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.95
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.95
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.95
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.94
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.94
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.94
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.94
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.94
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.93
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.93
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.93
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.93
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.93
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.92
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.92
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.92
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.92
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.92
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.92
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.91
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.91
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.91
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.91
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.91
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.9
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	98.9
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.9
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.88
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.86
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.84
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.84
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.84
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.83
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.83
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.83
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.83
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.83
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.83
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.83
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.83
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.83
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.83
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.83
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.83
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.82
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.82
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.82
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.82
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.82
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.82
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.82
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.82
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.82
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.81
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.81
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.81
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.81
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.81
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.81
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.81
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.81
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.81
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.81
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.81
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.81
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.81
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.81
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.81
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.81
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.81
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.8
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.8
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.8
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.8
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.8
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.8
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.8
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.8
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.8
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.79
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.79
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.79
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.79
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.79
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.79
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.79
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.79
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.78
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.78
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.78
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.78
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.78
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.78
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.78
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.77
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.77
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.77
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.77
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.77
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.76
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.76
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.76
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.76
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.76
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.76
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.75
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.75
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.75
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.75
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.74
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.74
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.74
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.73
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.73
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.73
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.72
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.72
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.72
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.71
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.71
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.71
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.69
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.69
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.69
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.68
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.68
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.67
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.67
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.65
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.65
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.64
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.64
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.62
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.6
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.58
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.49
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.46
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.44
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.41
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.39
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.36
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.34
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.33
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.32
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.31
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.31
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.29
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.29
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.25
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.22
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.2
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.19
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.16
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.15
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.11
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.1
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.09
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.07
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.04
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.03
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.02
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.01
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.01
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.01
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.01
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.01
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.0
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	97.98
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.97
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.96
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	97.93
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.91
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	97.91
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.9
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.88
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	97.88
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	97.87
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	97.87
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	97.86
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	97.84
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.84
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.83
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.82
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.82
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.82
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	97.81
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.81
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	97.81
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.8
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.8
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	97.79
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	97.75
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.75
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.73
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.71
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.71
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.7
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	96.87
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.66
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.66
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.66
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	96.81
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.64
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	96.81
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.64
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.63
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	96.77
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.59
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.57
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.57
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.56
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.56
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.44
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	96.54
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	96.53
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.2
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.17
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.03
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.44
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	94.47
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	94.37
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	94.31
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	93.36
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	92.88
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	92.69
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	91.64
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	86.78
2yuc_A	76	TNF receptor-associated factor 4; ZF-TRAF, cystein	82.93

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.91  E-value=2e-25  Score=204.98  Aligned_cols=165  Identities=30%  Similarity=0.546  Sum_probs=140.2

Q ss_pred             hhhhccCCCCCCCchhhhhcccccCCCCCCCccCCCCCCccCChHHHHHHHHHhcCCCcccCCCCCCcccchhhHHHHhh
Q psy5888         200 DLIRSQLPPLANSPKQFQESISNNTGKPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVR  279 (447)
Q Consensus       200 ~~~~~~~p~~~~s~~~~~~~~~~~~~~~~k~~~C~~Cgk~F~~~~~L~~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~  279 (447)
                      ...|..|...+.....+..++....+  .++|.|.+|++.|.....|..|+++|.++++|.|.+|++.|.+...|..|++
T Consensus        21 ~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   98 (190)
T 2i13_A           21 PYACPECGKSFSRSDHLAEHQRTHTG--EKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQR   98 (190)
T ss_dssp             ----------CCSSHHHHHGGGCC-----CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHH
T ss_pred             CCcCCCCccccCCHHHHHHHHHHcCC--CCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHHHHHHH
Confidence            35678888888888888888765443  4679999999999999999999999999999999999999999999999999


Q ss_pred             hhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCCCCCCCChhhhhhccCCCCCCCCCCCchhhhcccccccc
Q psy5888         280 NIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDRNGGIPSPSMIHNRCRPPSGILNDDSYFEEIRSFMGKVS  359 (447)
Q Consensus       280 ~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C~k~f~s~~~l~~H~~~h~~~~~~~~~~~~~c~~Cgk~f  359 (447)
                       .|.++++|.|.+|++.|.....|..|+++|+++++|.|..|++.|.....|..|++.|.+    +..|  .|..|++.|
T Consensus        99 -~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~----~~~~--~C~~C~~~f  171 (190)
T 2i13_A           99 -THTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTG----EKPY--KCPECGKSF  171 (190)
T ss_dssp             -HHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHC----CCCE--ECTTTCCEE
T ss_pred             -hcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCC----CCCe--ECCCCCCcc
Confidence             799999999999999999999999999999999999999999999999999999988764    2334  569999999


Q ss_pred             CChhHHHHHHHhhc
Q psy5888         360 ADGNRLVQRVSSLS  373 (447)
Q Consensus       360 ~~~~~L~~H~~~~~  373 (447)
                      .....|..|++.+.
T Consensus       172 ~~~~~L~~H~~~H~  185 (190)
T 2i13_A          172 SRRDALNVHQRTHT  185 (190)
T ss_dssp             SSHHHHHHHHTTC-
T ss_pred             CCHHHHHHHHHhcC
Confidence            99999999988654

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.89  E-value=1.8e-23  Score=191.89  Aligned_cols=159  Identities=23%  Similarity=0.392  Sum_probs=139.8

Q ss_pred             ccCCCCCCCchhhhhcccccCCCCCCCccC--CCCCCccCChHHHHHHHHHhcCCCcccCC--CCCCcccchhhHHHHhh
Q psy5888         204 SQLPPLANSPKQFQESISNNTGKPKDRYAC--KFCGKVFPRSANLTRHLRTHTGEQPYKCK--YCERSFSISSNLQRHVR  279 (447)
Q Consensus       204 ~~~p~~~~s~~~~~~~~~~~~~~~~k~~~C--~~Cgk~F~~~~~L~~H~r~H~~ekp~~C~--~C~k~F~s~~~L~~H~~  279 (447)
                      ..|...+.....+..++....+  +++|.|  .+|++.|.....|..|+++|.++++|.|.  .|++.|.+...|..|++
T Consensus        18 ~~C~~~f~~~~~L~~H~~~h~~--~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~   95 (190)
T 1tf6_A           18 ADCGAAYNKNWKLQAHLCKHTG--EKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFN   95 (190)
T ss_dssp             TTTCCBCSSHHHHHHHHHHHHC--CCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHH
T ss_pred             CCCcchhCCHHHHHHHHHhcCC--CCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHH
Confidence            4677777778888888765544  467999  88999999999999999999999999999  89999999999999995


Q ss_pred             hhc-cCCCCCCC--CCCCcccCCchhHHHHHhhhcCCCCcccCC--CCCCCCChhhhhhccCCCCCCCCCCCchhhhccc
Q psy5888         280 NIH-NKEKPFKC--PLCDRCFGQQTNLDRHLKKHEADGPTILDD--RNGGIPSPSMIHNRCRPPSGILNDDSYFEEIRSF  354 (447)
Q Consensus       280 ~~H-~~~kp~~C--~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~--C~k~f~s~~~l~~H~~~h~~~~~~~~~~~~~c~~  354 (447)
                      ..| .++++|.|  .+|++.|.+...|..|+++|+++++|.|..  |++.|.....|..|++.|.+       |  .|..
T Consensus        96 ~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~-------~--~C~~  166 (190)
T 1tf6_A           96 RFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG-------Y--PCKK  166 (190)
T ss_dssp             TTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS-------C--CCCS
T ss_pred             HhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC-------C--cCCC
Confidence            478 57889999  889999999999999999999999999988  99999999999999998875       2  4577


Q ss_pred             ---cccccCChhHHHHHHHhhc
Q psy5888         355 ---MGKVSADGNRLVQRVSSLS  373 (447)
Q Consensus       355 ---Cgk~f~~~~~L~~H~~~~~  373 (447)
                         |++.|.....|..|++.+.
T Consensus       167 ~~~C~~~f~~~~~l~~H~~~h~  188 (190)
T 1tf6_A          167 DDSCSFVGKTWTLYLKHVAECH  188 (190)
T ss_dssp             TTTCCCCCSCHHHHHHHHTTCC
T ss_pred             CCcCCCccccHHHHHHHHHhhc
Confidence               9999999999999987653

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.88  E-value=4.5e-24  Score=195.92  Aligned_cols=140  Identities=35%  Similarity=0.646  Sum_probs=116.0

Q ss_pred             CCCCccCCCCCCccCChHHHHHHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCCCcccCCchhHHHH
Q psy5888         227 PKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRH  306 (447)
Q Consensus       227 ~~k~~~C~~Cgk~F~~~~~L~~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~H  306 (447)
                      .+++|.|.+|++.|.....|..|+++|.++++|.|.+|++.|.+...|..|++ .|.++++|.|.+|++.|.....|..|
T Consensus        18 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H   96 (190)
T 2i13_A           18 GEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQR-THTGEKPYKCPECGKSFSQRANLRAH   96 (190)
T ss_dssp             -------------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHH-HHHCCCCEECTTTCCEESCHHHHHHH
T ss_pred             CCCCCcCCCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHH-hcCCCCCccCcccCCccCCHHHHHHH
Confidence            35679999999999999999999999999999999999999999999999999 79999999999999999999999999


Q ss_pred             HhhhcCCCCcccCCCCCCCCChhhhhhccCCCCCCCCCCCchhhhccccccccCChhHHHHHHHhhc
Q psy5888         307 LKKHEADGPTILDDRNGGIPSPSMIHNRCRPPSGILNDDSYFEEIRSFMGKVSADGNRLVQRVSSLS  373 (447)
Q Consensus       307 lr~H~~ekp~~C~~C~k~f~s~~~l~~H~~~h~~~~~~~~~~~~~c~~Cgk~f~~~~~L~~H~~~~~  373 (447)
                      ++.|+++++|.|..|++.|.....|..|++.|..    +..|  .|..|++.|.....|..|++.+.
T Consensus        97 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~----~~~~--~C~~C~~~f~~~~~L~~H~~~H~  157 (190)
T 2i13_A           97 QRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTG----EKPY--KCPECGKSFSREDNLHTHQRTHT  157 (190)
T ss_dssp             HHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHC----CCCE--ECTTTCCEESCHHHHHHHHHHHH
T ss_pred             HHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCC----CCCe--ECCCCCcccCCHHHHHHHHHhcC
Confidence            9999999999999999999999999999987753    2334  56999999999999999998764

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.87  E-value=1.6e-22  Score=178.87  Aligned_cols=138  Identities=22%  Similarity=0.434  Sum_probs=124.2

Q ss_pred             CCccCCCCCCccCChHHHHHHHH---HhcCCCcccCCCC-----CCcccchhhHHHHhhhhccCCCCCCCCC--CCcccC
Q psy5888         229 DRYACKFCGKVFPRSANLTRHLR---THTGEQPYKCKYC-----ERSFSISSNLQRHVRNIHNKEKPFKCPL--CDRCFG  298 (447)
Q Consensus       229 k~~~C~~Cgk~F~~~~~L~~H~r---~H~~ekp~~C~~C-----~k~F~s~~~L~~H~~~~H~~~kp~~C~~--C~k~F~  298 (447)
                      ..|.|..|++.|.+...|..|++   +|.++++|.|.+|     ++.|.+...|..|++ .|.++++|.|.+  |++.|.
T Consensus         2 ~~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~   80 (155)
T 2gli_A            2 TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMR-RHTGEKPHKCTFEGCRKSYS   80 (155)
T ss_dssp             CBCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTH-HHHCCCCCCCCSTTCCCCCS
T ss_pred             CcCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHH-hcCCCCCccCCCCCCCCccc
Confidence            46899999999999999999998   6888999999863     499999999999999 799999999986  999999


Q ss_pred             CchhHHHHHhhhcCCCCcccCC--CCCCCCChhhhhhcc-CCCCCCCCCCCchhhhccc--cccccCChhHHHHHHHhhc
Q psy5888         299 QQTNLDRHLKKHEADGPTILDD--RNGGIPSPSMIHNRC-RPPSGILNDDSYFEEIRSF--MGKVSADGNRLVQRVSSLS  373 (447)
Q Consensus       299 ~~~~L~~Hlr~H~~ekp~~C~~--C~k~f~s~~~l~~H~-~~h~~~~~~~~~~~~~c~~--Cgk~f~~~~~L~~H~~~~~  373 (447)
                      +...|..|++.|+++++|.|+.  |++.|.....|..|+ +.|..    +..|  .|..  |++.|.....|..|++.+.
T Consensus        81 ~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~----~~~~--~C~~~~C~~~f~~~~~L~~H~~~hh  154 (155)
T 2gli_A           81 RLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSN----EKPY--VCKLPGCTKRYTDPSSLRKHVKTVH  154 (155)
T ss_dssp             SHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCS----CCCE--ECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCC----CCCe--eCCCCCCccccCCHHHHHHHHHhhc
Confidence            9999999999999999999998  999999999999998 67753    3344  4577  9999999999999998653

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.86  E-value=4.6e-22  Score=169.01  Aligned_cols=112  Identities=24%  Similarity=0.468  Sum_probs=105.0

Q ss_pred             CCCccCCCCCCccCChHHHHHHHHHhcCCCcccCCCCCCcccchhhHHHHhhh--hccCCCCCCCCCCCcccCCchhHHH
Q psy5888         228 KDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRN--IHNKEKPFKCPLCDRCFGQQTNLDR  305 (447)
Q Consensus       228 ~k~~~C~~Cgk~F~~~~~L~~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~--~H~~~kp~~C~~C~k~F~~~~~L~~  305 (447)
                      .++|.|.+|++.|.....|..|+++|.++++|.|.+|++.|.+...|..|++.  .|.++++|.|.+|++.|.....|..
T Consensus         5 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~   84 (124)
T 2dlq_A            5 SSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRL   84 (124)
T ss_dssp             CSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHH
T ss_pred             CCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHH
Confidence            46799999999999999999999999999999999999999999999999984  2578899999999999999999999


Q ss_pred             HHhhhcCCCCcccCCCCCCCCChhhhhhccC-CCC
Q psy5888         306 HLKKHEADGPTILDDRNGGIPSPSMIHNRCR-PPS  339 (447)
Q Consensus       306 Hlr~H~~ekp~~C~~C~k~f~s~~~l~~H~~-~h~  339 (447)
                      |+++|+++++|.|..|++.|.....|..|++ .|.
T Consensus        85 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~  119 (124)
T 2dlq_A           85 HMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHS  119 (124)
T ss_dssp             HHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSS
T ss_pred             HHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCC
Confidence            9999999999999999999999999999986 444

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.86  E-value=4.5e-22  Score=182.54  Aligned_cols=141  Identities=24%  Similarity=0.412  Sum_probs=126.5

Q ss_pred             CCCCccC--CCCCCccCChHHHHHHHHHhcCCCcccC--CCCCCcccchhhHHHHhhhhccCCCCCCCC--CCCcccCCc
Q psy5888         227 PKDRYAC--KFCGKVFPRSANLTRHLRTHTGEQPYKC--KYCERSFSISSNLQRHVRNIHNKEKPFKCP--LCDRCFGQQ  300 (447)
Q Consensus       227 ~~k~~~C--~~Cgk~F~~~~~L~~H~r~H~~ekp~~C--~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~--~C~k~F~~~  300 (447)
                      ..++|.|  ..|++.|.....|..|+++|.++++|.|  .+|++.|.+...|..|++ .|.++++|.|.  .|++.|.+.
T Consensus         9 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~   87 (190)
T 1tf6_A            9 VYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSL-THTGEKNFTCDSDGCDLRFTTK   87 (190)
T ss_dssp             -CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHT-TTTTCCCEECCSSSCCCEESCH
T ss_pred             CCcceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHH-HccCCCceeCCCCCCCCccCCH
Confidence            3567999  6899999999999999999999999999  889999999999999999 89999999999  899999999


Q ss_pred             hhHHHHH-hhh-cCCCCccc--CCCCCCCCChhhhhhccCCCCCCCCCCCchhhhccc--cccccCChhHHHHHHHhhcc
Q psy5888         301 TNLDRHL-KKH-EADGPTIL--DDRNGGIPSPSMIHNRCRPPSGILNDDSYFEEIRSF--MGKVSADGNRLVQRVSSLSR  374 (447)
Q Consensus       301 ~~L~~Hl-r~H-~~ekp~~C--~~C~k~f~s~~~l~~H~~~h~~~~~~~~~~~~~c~~--Cgk~f~~~~~L~~H~~~~~~  374 (447)
                      ..|..|+ +.| .++++|.|  +.|++.|.....|..|++.|.+    +..|  .|..  |++.|.....|..|++.+..
T Consensus        88 ~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~----~~~~--~C~~~~C~k~F~~~~~L~~H~~~H~~  161 (190)
T 1tf6_A           88 ANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQ----QLPY--ECPHEGCDKRFSLPSRLKRHEKVHAG  161 (190)
T ss_dssp             HHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSS----SCSS--BCCSSSCCCBCSSHHHHHHHHTSSCS
T ss_pred             HHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCC----CCCc--cCCCCCCCchhcCHHHHHHHHHHhCC
Confidence            9999999 556 46789999  8999999999999999998764    3344  4566  99999999999999986543

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.85  E-value=6.4e-22  Score=167.13  Aligned_cols=110  Identities=33%  Similarity=0.655  Sum_probs=104.7

Q ss_pred             CCCccCCC--CCCccCChHHHHHHHHHhcCCCcccCC--CCCCcccchhhHHHHhhhhccCCCCCCCCCCCcccCCchhH
Q psy5888         228 KDRYACKF--CGKVFPRSANLTRHLRTHTGEQPYKCK--YCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNL  303 (447)
Q Consensus       228 ~k~~~C~~--Cgk~F~~~~~L~~H~r~H~~ekp~~C~--~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C~k~F~~~~~L  303 (447)
                      +++|.|.+  |++.|.....|..|+++|.++++|.|.  .|++.|.+...|..|++ .|.++++|.|.+|++.|.+...|
T Consensus         4 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l   82 (119)
T 2jp9_A            4 KRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQR-RHTGVKPFQCKTCQRKFSRSDHL   82 (119)
T ss_dssp             SCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHH-HHHCCCCEECTTTCCEESCHHHH
T ss_pred             CeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHH-HcCCCCCccCCccCchhCCHHHH
Confidence            46799998  999999999999999999999999999  69999999999999999 79999999999999999999999


Q ss_pred             HHHHhhhcCCCCccc--CCCCCCCCChhhhhhccCCC
Q psy5888         304 DRHLKKHEADGPTIL--DDRNGGIPSPSMIHNRCRPP  338 (447)
Q Consensus       304 ~~Hlr~H~~ekp~~C--~~C~k~f~s~~~l~~H~~~h  338 (447)
                      ..|+++|+++++|.|  +.|++.|.....|..|++.|
T Consensus        83 ~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           83 KTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             HHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            999999999999999  78999999999999998765

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.85  E-value=8.1e-22  Score=172.65  Aligned_cols=100  Identities=23%  Similarity=0.488  Sum_probs=93.0

Q ss_pred             CCCCccCCCCCCccCChHHHHHHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCCCcccCCchhHHHH
Q psy5888         227 PKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRH  306 (447)
Q Consensus       227 ~~k~~~C~~Cgk~F~~~~~L~~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~H  306 (447)
                      ++++|.|.+|++.|.....|..|+++|+++++|.|.+|++.|.+...|..|++ +|+++++|.|.+|++.|.+...|..|
T Consensus        19 Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~~C~k~F~~~~~L~~H   97 (133)
T 2lt7_A           19 GRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEI-HHTGERRYQCLACGKSFINYQFMSSH   97 (133)
T ss_dssp             TEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHH-HHHTCCCEEESSSCCEESSHHHHHHH
T ss_pred             CCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhcc-ccCCCccccCCCCCCCcCCHHHHHHH
Confidence            45789999999999999999999999999999999999999999999999998 89999999999999999999999999


Q ss_pred             HhhhcCCC------CcccCCCCCCCCC
Q psy5888         307 LKKHEADG------PTILDDRNGGIPS  327 (447)
Q Consensus       307 lr~H~~ek------p~~C~~C~k~f~s  327 (447)
                      +++|++++      .|.|..|++.|..
T Consensus        98 ~~~hh~~~p~~~~k~~~C~~C~k~~~~  124 (133)
T 2lt7_A           98 IKSVHSQDPSGDSKLYRLHPCRSLQIR  124 (133)
T ss_dssp             HHHHTCCCTTSSSCCEEECCCCSSCCC
T ss_pred             hHHhcCCCCCCCCCCeecCCCCchhhh
Confidence            99998765      4788888887754

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.82  E-value=6.9e-21  Score=162.29  Aligned_cols=111  Identities=30%  Similarity=0.585  Sum_probs=103.1

Q ss_pred             CCCccCC--CCCCccCChHHHHHHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCC--CCcccCCchhH
Q psy5888         228 KDRYACK--FCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPL--CDRCFGQQTNL  303 (447)
Q Consensus       228 ~k~~~C~--~Cgk~F~~~~~L~~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~--C~k~F~~~~~L  303 (447)
                      .++|.|.  .|++.|.+...|..|+++| ++++|.|.+|++.|.+...|..|++ .|.++++|.|.+  |++.|.....|
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~l   80 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQL-VHTGEKPFQCTFEGCGKRFSLDFNL   80 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGG-GTSCCCCEECCSTTCCCEESCHHHH
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHH-HcCCCCCeeCCCCCCcCccCCHHHH
Confidence            3579999  8999999999999999999 8899999999999999999999999 899999999986  99999999999


Q ss_pred             HHHHhhhcCCCCcccC--CCCCCCCChhhhhhccCCCCC
Q psy5888         304 DRHLKKHEADGPTILD--DRNGGIPSPSMIHNRCRPPSG  340 (447)
Q Consensus       304 ~~Hlr~H~~ekp~~C~--~C~k~f~s~~~l~~H~~~h~~  340 (447)
                      ..|+++|+++++|.|.  .|++.|.....|..|++.|..
T Consensus        81 ~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~  119 (124)
T 1ubd_C           81 RTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAK  119 (124)
T ss_dssp             HHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC-
T ss_pred             HHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcc
Confidence            9999999999999995  599999999999999988765

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.81  E-value=4.5e-20  Score=163.50  Aligned_cols=113  Identities=25%  Similarity=0.466  Sum_probs=105.8

Q ss_pred             CCCCccCCCCCCccCChHHHHHHHHH-hcCCCc--------ccCCCCCCcccchhhHHHHhhhhccCCCCCCCCC--CCc
Q psy5888         227 PKDRYACKFCGKVFPRSANLTRHLRT-HTGEQP--------YKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPL--CDR  295 (447)
Q Consensus       227 ~~k~~~C~~Cgk~F~~~~~L~~H~r~-H~~ekp--------~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~--C~k  295 (447)
                      ....|.|.+|++.|.+...|..|+++ |.++++        |.|.+|++.|.+...|..|++ .|.++++|.|.+  |++
T Consensus        22 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~  100 (155)
T 2rpc_A           22 AQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIR-VHTGEKPFPCPFPGCGK  100 (155)
T ss_dssp             TCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTH-HHHCCCSEECSCTTTCC
T ss_pred             hhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHH-hcCCCCcccCCcCCCCC
Confidence            34679999999999999999999997 776654        899999999999999999999 899999999998  999


Q ss_pred             ccCCchhHHHHHhhhcCCCCcccCC--CCCCCCChhhhhhccCCCCC
Q psy5888         296 CFGQQTNLDRHLKKHEADGPTILDD--RNGGIPSPSMIHNRCRPPSG  340 (447)
Q Consensus       296 ~F~~~~~L~~Hlr~H~~ekp~~C~~--C~k~f~s~~~l~~H~~~h~~  340 (447)
                      .|.+...|..|+++|+++++|.|..  |++.|.....|..|++.|.+
T Consensus       101 ~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~  147 (155)
T 2rpc_A          101 IFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTS  147 (155)
T ss_dssp             EESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTS
T ss_pred             ccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcC
Confidence            9999999999999999999999997  99999999999999998875

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.81  E-value=1.5e-21  Score=170.94  Aligned_cols=117  Identities=15%  Similarity=0.177  Sum_probs=101.9

Q ss_pred             HHHHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCCCCCC
Q psy5888         246 LTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDRNGGI  325 (447)
Q Consensus       246 L~~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C~k~f  325 (447)
                      +..|.++|.|+++|+|.+|++.|.+...|..|++ +|.++++|.|.+|++.|.+...|..|+++|.++++|.|+.|++.|
T Consensus        10 ~~h~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F   88 (133)
T 2lt7_A           10 DDHYELIVDGRVYYICIVCKRSYVCLTSLRRHFN-IHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSF   88 (133)
T ss_dssp             SSEEEEEETTEEEEEETTTCCEESCHHHHHHHHH-HHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEE
T ss_pred             HhhceeecCCCcCeECCCCCCCcCCHHHHHHHHH-HcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCc
Confidence            3445568899999999999999999999999999 899999999999999999999999999999999999999999999


Q ss_pred             CChhhhhhccCCCCCCCCCCCchhhhccccccccCChh
Q psy5888         326 PSPSMIHNRCRPPSGILNDDSYFEEIRSFMGKVSADGN  363 (447)
Q Consensus       326 ~s~~~l~~H~~~h~~~~~~~~~~~~~c~~Cgk~f~~~~  363 (447)
                      .....|..|++.|+............|..|++.|..+.
T Consensus        89 ~~~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~~~  126 (133)
T 2lt7_A           89 INYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQY  126 (133)
T ss_dssp             SSHHHHHHHHHHHTCCCTTSSSCCEEECCCCSSCCCCC
T ss_pred             CCHHHHHHHhHHhcCCCCCCCCCCeecCCCCchhhhcc
Confidence            99999999998887643222222235699999988654

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.81  E-value=2.2e-20  Score=165.18  Aligned_cols=137  Identities=26%  Similarity=0.532  Sum_probs=120.7

Q ss_pred             hccCCCCCCCchhhhhccccc-CCCCCCCccCCC-----CCCccCChHHHHHHHHHhcCCCcccCCC--CCCcccchhhH
Q psy5888         203 RSQLPPLANSPKQFQESISNN-TGKPKDRYACKF-----CGKVFPRSANLTRHLRTHTGEQPYKCKY--CERSFSISSNL  274 (447)
Q Consensus       203 ~~~~p~~~~s~~~~~~~~~~~-~~~~~k~~~C~~-----Cgk~F~~~~~L~~H~r~H~~ekp~~C~~--C~k~F~s~~~L  274 (447)
                      +..|...+.+...+..++... .....++|.|.+     |++.|.....|..|+++|+++++|.|.+  |++.|.+...|
T Consensus         6 C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l   85 (155)
T 2gli_A            6 WDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENL   85 (155)
T ss_dssp             BTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHH
T ss_pred             cCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHH
Confidence            556777788888888887631 233456788875     3599999999999999999999999986  99999999999


Q ss_pred             HHHhhhhccCCCCCCCCC--CCcccCCchhHHHHH-hhhcCCCCcccCC--CCCCCCChhhhhhccCCCCC
Q psy5888         275 QRHVRNIHNKEKPFKCPL--CDRCFGQQTNLDRHL-KKHEADGPTILDD--RNGGIPSPSMIHNRCRPPSG  340 (447)
Q Consensus       275 ~~H~~~~H~~~kp~~C~~--C~k~F~~~~~L~~Hl-r~H~~ekp~~C~~--C~k~f~s~~~l~~H~~~h~~  340 (447)
                      ..|++ .|.++++|.|.+  |++.|.+...|..|+ +.|.++++|.|..  |++.|.....|..|++.|++
T Consensus        86 ~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A           86 KTHLR-SHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             HHHHH-HTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             HHHHH-HcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence            99999 799999999998  999999999999998 7899999999998  99999999999999987763

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.78  E-value=6.5e-19  Score=146.03  Aligned_cols=92  Identities=42%  Similarity=0.799  Sum_probs=87.6

Q ss_pred             CCCCCccCCCCCCccCChHHHHHHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCCCcccCCchhHHH
Q psy5888         226 KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDR  305 (447)
Q Consensus       226 ~~~k~~~C~~Cgk~F~~~~~L~~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~  305 (447)
                      ..+++|.|.+|++.|.....|..|+++|+++++|.|.+|++.|.....|.+|++ .|.++++|.|.+|++.|.+...|..
T Consensus        13 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~L~~   91 (106)
T 2ee8_A           13 KTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRY-IHSKEKPFKCQECGKGFCQSRTLAV   91 (106)
T ss_dssp             CCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGG-GSCCCCTTSCSSSCCCCSSHHHHHH
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHH-HhCCCCCeECCCcCCcccCHHHHHH
Confidence            345779999999999999999999999999999999999999999999999999 8999999999999999999999999


Q ss_pred             HHhhhcCCCCccc
Q psy5888         306 HLKKHEADGPTIL  318 (447)
Q Consensus       306 Hlr~H~~ekp~~C  318 (447)
                      |+++|+++++|.+
T Consensus        92 H~~~H~~~~~~~~  104 (106)
T 2ee8_A           92 HKTLHMQTSSPTA  104 (106)
T ss_dssp             HHHHTTSCCCCCC
T ss_pred             HHHHhCCCCCCcC
Confidence            9999999998864

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.77  E-value=1.4e-19  Score=152.70  Aligned_cols=114  Identities=25%  Similarity=0.480  Sum_probs=103.5

Q ss_pred             cCCCcccCCC--CCCcccchhhHHHHhhhhccCCCCCCCC--CCCcccCCchhHHHHHhhhcCCCCcccCCCCCCCCChh
Q psy5888         254 TGEQPYKCKY--CERSFSISSNLQRHVRNIHNKEKPFKCP--LCDRCFGQQTNLDRHLKKHEADGPTILDDRNGGIPSPS  329 (447)
Q Consensus       254 ~~ekp~~C~~--C~k~F~s~~~L~~H~~~~H~~~kp~~C~--~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C~k~f~s~~  329 (447)
                      +++++|.|.+  |++.|.+...|..|++ .|.++++|.|.  .|++.|.+...|..|+++|+++++|.|+.|++.|....
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~   80 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSR-KHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSD   80 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHH-HHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHH
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHH-hhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHH
Confidence            5788999997  9999999999999999 89999999999  79999999999999999999999999999999999999


Q ss_pred             hhhhccCCCCCCCCCCCchhhhccccccccCChhHHHHHHHhh
Q psy5888         330 MIHNRCRPPSGILNDDSYFEEIRSFMGKVSADGNRLVQRVSSL  372 (447)
Q Consensus       330 ~l~~H~~~h~~~~~~~~~~~~~c~~Cgk~f~~~~~L~~H~~~~  372 (447)
                      .|..|++.|.+    +..|.|.+..||+.|.....|.+|++.+
T Consensus        81 ~l~~H~~~h~~----~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           81 HLKTHTRTHTG----EKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHHHHHHHT----CCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             HHHHHHHHhcC----CCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            99999987754    3445554489999999999999998753

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.75  E-value=2.3e-18  Score=139.93  Aligned_cols=89  Identities=40%  Similarity=0.838  Sum_probs=83.5

Q ss_pred             CCCCccCCCCCCccCChHHHHHHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCCCcccCCchhHHHH
Q psy5888         227 PKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRH  306 (447)
Q Consensus       227 ~~k~~~C~~Cgk~F~~~~~L~~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~H  306 (447)
                      .+++|.|.+|++.|.....|..|+++|.++++|.|.+|++.|.....|..|++ .|.++++|.|.+|++.|.+...|..|
T Consensus         5 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H   83 (96)
T 2dmd_A            5 SSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLR-IHSDERPFKCQICPYASRNSSQLTVH   83 (96)
T ss_dssp             CCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHH-HSCCCCCEECSSSSCEESSHHHHHHH
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHH-HhCCCCCccCCCCCCccCCHHHHHHH
Confidence            34679999999999999999999999999999999999999999999999999 79999999999999999999999999


Q ss_pred             HhhhcCCCCc
Q psy5888         307 LKKHEADGPT  316 (447)
Q Consensus       307 lr~H~~ekp~  316 (447)
                      +++|++++..
T Consensus        84 ~~~h~~~~~p   93 (96)
T 2dmd_A           84 LRSHTGDSGP   93 (96)
T ss_dssp             HTTCCSCCCC
T ss_pred             HHHhcCCCCC
Confidence            9999988753

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.74  E-value=1.7e-18  Score=146.85  Aligned_cols=113  Identities=20%  Similarity=0.353  Sum_probs=102.2

Q ss_pred             cCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCCCcccCCchhHHHHHhh---hcCCCCcccCCCCCCCCChhh
Q psy5888         254 TGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKK---HEADGPTILDDRNGGIPSPSM  330 (447)
Q Consensus       254 ~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~---H~~ekp~~C~~C~k~f~s~~~  330 (447)
                      .++++|.|.+|++.|.+...|..|++ .|.++++|.|.+|++.|.+...|..|++.   |.++++|.|..|++.|.....
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~   81 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNR-KHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRME   81 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHH-HHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHH
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHH-hCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHH
Confidence            46789999999999999999999999 89999999999999999999999999986   578899999999999999999


Q ss_pred             hhhccCCCCCCCCCCCchhhhccccccccCChhHHHHHHHhhc
Q psy5888         331 IHNRCRPPSGILNDDSYFEEIRSFMGKVSADGNRLVQRVSSLS  373 (447)
Q Consensus       331 l~~H~~~h~~~~~~~~~~~~~c~~Cgk~f~~~~~L~~H~~~~~  373 (447)
                      |..|++.|..    +..|  .|..|++.|.....|.+|++..+
T Consensus        82 l~~H~~~h~~----~~~~--~C~~C~~~f~~~~~l~~H~~~~H  118 (124)
T 2dlq_A           82 LRLHMVSHTG----EMPY--KCSSCSQQFMQKKDLQSHMIKLH  118 (124)
T ss_dssp             HHHHHHHHSS----SCSE--ECSSSCCEESSHHHHHHHHHHTS
T ss_pred             HHHHHHHcCC----CCCc--cCCCccchhCCHHHHHHHHHHHC
Confidence            9999988764    2334  56999999999999999998544

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.73  E-value=4.6e-18  Score=150.49  Aligned_cols=119  Identities=30%  Similarity=0.596  Sum_probs=105.9

Q ss_pred             hhhhccCCCCCCCchhhhhcccc-cCCCCC------CCccCCCCCCccCChHHHHHHHHHhcCCCcccCCC--CCCcccc
Q psy5888         200 DLIRSQLPPLANSPKQFQESISN-NTGKPK------DRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKY--CERSFSI  270 (447)
Q Consensus       200 ~~~~~~~p~~~~s~~~~~~~~~~-~~~~~~------k~~~C~~Cgk~F~~~~~L~~H~r~H~~ekp~~C~~--C~k~F~s  270 (447)
                      ...|..|...+.....+..|+.. ......      ..|.|.+|++.|.....|..|+++|+++++|.|.+  |++.|.+
T Consensus        25 ~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~  104 (155)
T 2rpc_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFAR  104 (155)
T ss_dssp             SSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESC
T ss_pred             ccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCC
Confidence            45677888888888888888765 333221      12899999999999999999999999999999998  9999999


Q ss_pred             hhhHHHHhhhhccCCCCCCCCC--CCcccCCchhHHHHHhhhcCCCCcccC
Q psy5888         271 SSNLQRHVRNIHNKEKPFKCPL--CDRCFGQQTNLDRHLKKHEADGPTILD  319 (447)
Q Consensus       271 ~~~L~~H~~~~H~~~kp~~C~~--C~k~F~~~~~L~~Hlr~H~~ekp~~C~  319 (447)
                      ...|.+|++ .|.++++|.|.+  |++.|.+...|..|+++|+++++|.|.
T Consensus       105 ~~~L~~H~~-~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A          105 SENLKIHKR-THTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             HHHHHHHHT-TTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred             HHHHHHHHH-hhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            999999999 899999999997  999999999999999999999999985

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.72  E-value=4.5e-18  Score=133.82  Aligned_cols=82  Identities=43%  Similarity=0.941  Sum_probs=78.4

Q ss_pred             CccCCCCCCccCChHHHHHHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCCCcccCCchhHHHHHhh
Q psy5888         230 RYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKK  309 (447)
Q Consensus       230 ~~~C~~Cgk~F~~~~~L~~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~  309 (447)
                      +|.|.+|++.|.....|..|+++|.++++|.|.+|++.|.....|..|++ .|.++++|.|.+|++.|.+...|..|+++
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   79 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTF-IHTGEKPHKCQVCGKAFSQSSNLITHSRK   79 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHH-HHHTCCCEECTTTSCEESSHHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHH-HhcCCCCCcCCCcchhhCChHHHHHHHHh
Confidence            48999999999999999999999999999999999999999999999999 89999999999999999999999999999


Q ss_pred             hcC
Q psy5888         310 HEA  312 (447)
Q Consensus       310 H~~  312 (447)
                      |+|
T Consensus        80 H~g   82 (82)
T 2kmk_A           80 HTG   82 (82)
T ss_dssp             HC-
T ss_pred             hCC
Confidence            974

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.72  E-value=4.9e-18  Score=136.16  Aligned_cols=86  Identities=43%  Similarity=0.894  Sum_probs=80.2

Q ss_pred             CCCccCC--CCCCccCChHHHHHHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCCCcccCCchhHHH
Q psy5888         228 KDRYACK--FCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDR  305 (447)
Q Consensus       228 ~k~~~C~--~Cgk~F~~~~~L~~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~  305 (447)
                      +++|.|.  .|++.|.....|..|+++|.++++|.|.+|++.|.+...|..|++ .|.++++|.|.+|++.|.+...|..
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~   80 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIR-THTGEKPFACDICGRKFARSDERKR   80 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHH-HHHCCCCEECTTTCCEESSHHHHHH
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHH-HcCCCCCccCCCCCchhCCHHHHHH
Confidence            4679998  599999999999999999999999999999999999999999999 8999999999999999999999999


Q ss_pred             HHhhhcCCC
Q psy5888         306 HLKKHEADG  314 (447)
Q Consensus       306 Hlr~H~~ek  314 (447)
                      |+++|++++
T Consensus        81 H~~~H~~~k   89 (90)
T 1a1h_A           81 HTKIHLRQK   89 (90)
T ss_dssp             HHGGGGC--
T ss_pred             HHHHhcccC
Confidence            999999876

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.70  E-value=3.3e-17  Score=132.76  Aligned_cols=85  Identities=35%  Similarity=0.788  Sum_probs=78.5

Q ss_pred             CCCccCCCCCCccCChHHHHHHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCC--CCCCCCCCCcccCCchhHHH
Q psy5888         228 KDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKE--KPFKCPLCDRCFGQQTNLDR  305 (447)
Q Consensus       228 ~k~~~C~~Cgk~F~~~~~L~~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~--kp~~C~~C~k~F~~~~~L~~  305 (447)
                      +++|.|.+|++.|.....|..|+++|+++++|.|.+|++.|.+...|..|++ .|.++  ++|.|.+|++.|.+...|..
T Consensus         5 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~~~C~~C~~~f~~~~~L~~   83 (95)
T 2yt9_A            5 SSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVR-SHDGSVGKPYICQSCGKGFSRPDHLNG   83 (95)
T ss_dssp             CSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHH-HHCCCCCSSBCCSSSCCCBSSHHHHHH
T ss_pred             CCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHH-HhcCCCCCceECCCccchhCCHHHHHH
Confidence            4679999999999999999999999999999999999999999999999998 78876  89999999999999999999


Q ss_pred             HHh-hhcCC
Q psy5888         306 HLK-KHEAD  313 (447)
Q Consensus       306 Hlr-~H~~e  313 (447)
                      |++ .|.++
T Consensus        84 H~~~~H~~~   92 (95)
T 2yt9_A           84 HIKQVHSGP   92 (95)
T ss_dssp             HHHHTSCCC
T ss_pred             HHHHhcCCC
Confidence            986 67654

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.69  E-value=1.5e-17  Score=141.45  Aligned_cols=108  Identities=33%  Similarity=0.714  Sum_probs=93.6

Q ss_pred             cCCCCCCCchhhhhcccccCCCCCCCccCCCCCCccCChHHHHHHHHHhcCCCcccCCC--CCCcccchhhHHHHhhhhc
Q psy5888         205 QLPPLANSPKQFQESISNNTGKPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKY--CERSFSISSNLQRHVRNIH  282 (447)
Q Consensus       205 ~~p~~~~s~~~~~~~~~~~~~~~~k~~~C~~Cgk~F~~~~~L~~H~r~H~~ekp~~C~~--C~k~F~s~~~L~~H~~~~H  282 (447)
                      .|...+.....+..++...   ..++|.|.+|++.|.....|..|+++|+++++|.|.+  |++.|.+...|..|++ +|
T Consensus        12 ~C~~~f~~~~~l~~H~~~h---~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h   87 (124)
T 1ubd_C           12 GCTKMFRDNSAMRKHLHTH---GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVR-IH   87 (124)
T ss_dssp             TCCCEESSHHHHHHHHGGG---SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHHHH-HH
T ss_pred             CCcCccCCHHHHHHHHHHc---CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHHH-Hh
Confidence            5666677777788887654   4568999999999999999999999999999999986  9999999999999999 89


Q ss_pred             cCCCCCCCC--CCCcccCCchhHHHHHhhhcCCCCc
Q psy5888         283 NKEKPFKCP--LCDRCFGQQTNLDRHLKKHEADGPT  316 (447)
Q Consensus       283 ~~~kp~~C~--~C~k~F~~~~~L~~Hlr~H~~ekp~  316 (447)
                      .++++|.|+  .|++.|.+...|..|+++|++++++
T Consensus        88 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~~  123 (124)
T 1ubd_C           88 TGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN  123 (124)
T ss_dssp             HCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC-----
T ss_pred             CCCCceECCCCCCCCccCCHHHHHHHHHHHcccccC
Confidence            999999996  4999999999999999999998875

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.69  E-value=3e-17  Score=136.61  Aligned_cols=89  Identities=22%  Similarity=0.384  Sum_probs=83.1

Q ss_pred             CCCCccCCCCCCccCChHHHHHHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCCCcccCCchhHHHH
Q psy5888         227 PKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRH  306 (447)
Q Consensus       227 ~~k~~~C~~Cgk~F~~~~~L~~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~H  306 (447)
                      .+++|.|.+|++.|.....|..|+++|.  ++|.|.+|++.|.....|.+|++  |.++++|.|.+|++.|.+...|..|
T Consensus        13 ~~~~~~C~~C~~~f~~~~~l~~H~~~H~--~~~~C~~C~~~f~~~~~l~~H~~--H~~~~~~~C~~C~~~f~~~~~L~~H   88 (107)
T 1wjp_A           13 NKEVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQEHES--KCEYKKLTCLECMRTFKSSFSIWRH   88 (107)
T ss_dssp             CCCCCBCTTTCCBCSSHHHHHHHHHHHH--HSBCCTTTCCCBSSHHHHHHHHH--HCSTGGGEEGGGTEECSSHHHHHHH
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHHCC--CCccCCCCCCccCCHHHHHHHHH--cCCCCCccCccccchhCCHHHHHHH
Confidence            4578999999999999999999999994  78999999999999999999984  9999999999999999999999999


Q ss_pred             Hh-hhcCCCCcccC
Q psy5888         307 LK-KHEADGPTILD  319 (447)
Q Consensus       307 lr-~H~~ekp~~C~  319 (447)
                      ++ .|.++++|.|.
T Consensus        89 ~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           89 QVEVHNQNNMAPTS  102 (107)
T ss_dssp             HHHTSCCCCCCCCC
T ss_pred             HHHHcCCCCCCCCC
Confidence            97 89999999874

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.68  E-value=3.6e-17  Score=136.50  Aligned_cols=85  Identities=31%  Similarity=0.744  Sum_probs=80.0

Q ss_pred             CCCCCccCCCCCCccCChHHHHHHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCCCcccCCchhHHH
Q psy5888         226 KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDR  305 (447)
Q Consensus       226 ~~~k~~~C~~Cgk~F~~~~~L~~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~  305 (447)
                      ..+++|.| .|++.|.....|..|+++|.++++|.|.+|++.|.+...|.+|++ .|.++++|.|.+|++.|.+...|..
T Consensus         6 ~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~   83 (110)
T 2csh_A            6 SGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK-IHTGIKPYECNICAKRFMWRDSFHR   83 (110)
T ss_dssp             CCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHT-TTCCCCCEECSSSCCEESCHHHHHH
T ss_pred             CCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHH-HcCCCCCeeCCCCcchhcCHHHHHH
Confidence            34578999 999999999999999999999999999999999999999999998 8999999999999999999999999


Q ss_pred             HHhhhcC
Q psy5888         306 HLKKHEA  312 (447)
Q Consensus       306 Hlr~H~~  312 (447)
                      |++.|+.
T Consensus        84 H~~~~~~   90 (110)
T 2csh_A           84 HVTSCTK   90 (110)
T ss_dssp             HHHHHHH
T ss_pred             HHHHccc
Confidence            9999874

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.67  E-value=1.3e-16  Score=130.24  Aligned_cols=86  Identities=43%  Similarity=0.916  Sum_probs=80.7

Q ss_pred             CCCCCccCCC--CCCccCChHHHHHHHHHhcCCCcccCC--CCCCcccchhhHHHHhhhhccCCCCCCCCCCCcccCCch
Q psy5888         226 KPKDRYACKF--CGKVFPRSANLTRHLRTHTGEQPYKCK--YCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQT  301 (447)
Q Consensus       226 ~~~k~~~C~~--Cgk~F~~~~~L~~H~r~H~~ekp~~C~--~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C~k~F~~~~  301 (447)
                      ..++.|.|.+  |++.|.....|..|+++|.++++|.|.  .|++.|.....|.+|++ .|.++++|.|.+|++.|....
T Consensus        11 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~   89 (100)
T 2ebt_A           11 EKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYR-KHTGAKPFQCGVCNRSFSRSD   89 (100)
T ss_dssp             CSCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHH-HHTSCCSCBCSSSCCBCSSHH
T ss_pred             ccCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHH-HhCCCCCeECCCCcCccCCHH
Confidence            3356799997  999999999999999999999999997  59999999999999998 899999999999999999999


Q ss_pred             hHHHHHhhhcC
Q psy5888         302 NLDRHLKKHEA  312 (447)
Q Consensus       302 ~L~~Hlr~H~~  312 (447)
                      .|..|+++|++
T Consensus        90 ~l~~H~~~H~~  100 (100)
T 2ebt_A           90 HLALHMKRHQN  100 (100)
T ss_dssp             HHHHHHHHHCC
T ss_pred             HHHHHHHHhCC
Confidence            99999999964

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.67  E-value=7.3e-17  Score=130.98  Aligned_cols=88  Identities=27%  Similarity=0.502  Sum_probs=83.8

Q ss_pred             hcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCCCCCCCChhhhh
Q psy5888         253 HTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDRNGGIPSPSMIH  332 (447)
Q Consensus       253 H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C~k~f~s~~~l~  332 (447)
                      +.++++|.|.+|++.|.+...|..|++ .|.++++|.|.+|++.|.....|..|+++|+++++|.|..|++.|.....|.
T Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   81 (96)
T 2dmd_A            3 SGSSGPHKCEVCGKCFSRKDKLKTHMR-CHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLT   81 (96)
T ss_dssp             CCCCCCCCBTTTTBCCCCHHHHHHHGG-GCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHH
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHHHH-hcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHH
Confidence            467899999999999999999999999 8999999999999999999999999999999999999999999999999999


Q ss_pred             hccCCCCCC
Q psy5888         333 NRCRPPSGI  341 (447)
Q Consensus       333 ~H~~~h~~~  341 (447)
                      .|++.|++.
T Consensus        82 ~H~~~h~~~   90 (96)
T 2dmd_A           82 VHLRSHTGD   90 (96)
T ss_dssp             HHHTTCCSC
T ss_pred             HHHHHhcCC
Confidence            999998763

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.66  E-value=8.8e-17  Score=135.19  Aligned_cols=92  Identities=17%  Similarity=0.307  Sum_probs=79.9

Q ss_pred             CCCCccCCCCCCccCChHHHHHHHHH--hcCCCccc-CCCCCCcc--cchhhHHHHhhhhccCCCCCCCCCCCcccCCch
Q psy5888         227 PKDRYACKFCGKVFPRSANLTRHLRT--HTGEQPYK-CKYCERSF--SISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQT  301 (447)
Q Consensus       227 ~~k~~~C~~Cgk~F~~~~~L~~H~r~--H~~ekp~~-C~~C~k~F--~s~~~L~~H~~~~H~~~kp~~C~~C~k~F~~~~  301 (447)
                      .+++|.|.+|++.|.....|..|+++  |.+++++. |.+|++.|  .....|..|++ +|.++++|.|.+|++.|.+..
T Consensus        16 ~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~-~H~~~~~~~C~~C~k~f~~~~   94 (115)
T 2dmi_A           16 GASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEG-KEDAQKVLKCMYCGHSFESLQ   94 (115)
T ss_dssp             CCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCC-SCCCCSSCBCSSSCCBCSSHH
T ss_pred             CCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhh-ccCCCcceECCCCCCccCCHH
Confidence            35789999999999999999999998  77777655 99999998  88999999998 799999999999999999999


Q ss_pred             hHHHHHhhhcCCCCcccC
Q psy5888         302 NLDRHLKKHEADGPTILD  319 (447)
Q Consensus       302 ~L~~Hlr~H~~ekp~~C~  319 (447)
                      .|..|+++|+....+.+.
T Consensus        95 ~L~~H~~~hh~~~~~~~~  112 (115)
T 2dmi_A           95 DLSVHMIKTKHYQKVSGP  112 (115)
T ss_dssp             HHHHHHHHTTTTTCSCCC
T ss_pred             HHHHHHHHhCCcccCCCC
Confidence            999999998776655443

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.66  E-value=2.8e-18  Score=144.41  Aligned_cols=96  Identities=13%  Similarity=0.099  Sum_probs=76.9

Q ss_pred             HHHHHHHHHhcCCCcccCCCCCCcccchhhHHHHhhhh--ccCCCCCC-CCCCCccc--CCchhHHHHHhhhcCCCCccc
Q psy5888         244 ANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNI--HNKEKPFK-CPLCDRCF--GQQTNLDRHLKKHEADGPTIL  318 (447)
Q Consensus       244 ~~L~~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~--H~~~kp~~-C~~C~k~F--~~~~~L~~Hlr~H~~ekp~~C  318 (447)
                      ..|..|+++|+++++|.|.+|++.|.+...|..|++ .  |.+.+++. |.+|++.|  .....|..|+++|.++++|.|
T Consensus         5 ~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C   83 (115)
T 2dmi_A            5 SSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMN-ETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKC   83 (115)
T ss_dssp             CCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHH-HTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBC
T ss_pred             hhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHH-HhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceEC
Confidence            356778888888888888888888888888888887 6  66666544 88888887  788888888888888888888


Q ss_pred             CCCCCCCCChhhhhhccCCCCC
Q psy5888         319 DDRNGGIPSPSMIHNRCRPPSG  340 (447)
Q Consensus       319 ~~C~k~f~s~~~l~~H~~~h~~  340 (447)
                      ..|++.|.....|..|++.|+.
T Consensus        84 ~~C~k~f~~~~~L~~H~~~hh~  105 (115)
T 2dmi_A           84 MYCGHSFESLQDLSVHMIKTKH  105 (115)
T ss_dssp             SSSCCBCSSHHHHHHHHHHTTT
T ss_pred             CCCCCccCCHHHHHHHHHHhCC
Confidence            8888888888888888776654

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.64  E-value=2.1e-16  Score=130.81  Aligned_cols=86  Identities=26%  Similarity=0.516  Sum_probs=81.4

Q ss_pred             cCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCCCCCCCChhhhhh
Q psy5888         254 TGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDRNGGIPSPSMIHN  333 (447)
Q Consensus       254 ~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C~k~f~s~~~l~~  333 (447)
                      ..+++|.|.+|++.|.....|..|++ .|.++++|.|.+|++.|.....|..|+++|+++++|.|..|++.|.....|..
T Consensus        13 ~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~   91 (106)
T 2ee8_A           13 KTKKEFICKFCGRHFTKSYNLLIHER-THTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAV   91 (106)
T ss_dssp             CCCCCCBCSSSCCBCSSHHHHHHHHH-HHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHH
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHH-HcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHH
Confidence            45788999999999999999999999 79999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCC
Q psy5888         334 RCRPPSG  340 (447)
Q Consensus       334 H~~~h~~  340 (447)
                      |++.|..
T Consensus        92 H~~~H~~   98 (106)
T 2ee8_A           92 HKTLHMQ   98 (106)
T ss_dssp             HHHHTTS
T ss_pred             HHHHhCC
Confidence            9988875

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.64  E-value=1.6e-16  Score=126.93  Aligned_cols=83  Identities=43%  Similarity=0.932  Sum_probs=77.2

Q ss_pred             CCCccCCC--CCCccCChHHHHHHHHHhcCCCcccCC--CCCCcccchhhHHHHhhhhccCCCCCCCCCCCcccCCchhH
Q psy5888         228 KDRYACKF--CGKVFPRSANLTRHLRTHTGEQPYKCK--YCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNL  303 (447)
Q Consensus       228 ~k~~~C~~--Cgk~F~~~~~L~~H~r~H~~ekp~~C~--~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C~k~F~~~~~L  303 (447)
                      .+.|.|.+  |++.|.....|..|+++|.++++|.|.  .|++.|.+...|..|++ .|.++++|.|.+|++.|.....|
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l   81 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYR-KHTGHRPFQCQKCDRAFSRSDHL   81 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHH-HHHCCCCEECSSSSCEESSHHHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHH-HcCCCCCccCCCCCcccCCHHHH
Confidence            35799999  999999999999999999999999997  49999999999999998 89999999999999999999999


Q ss_pred             HHHHhhhc
Q psy5888         304 DRHLKKHE  311 (447)
Q Consensus       304 ~~Hlr~H~  311 (447)
                      ..|+++|.
T Consensus        82 ~~H~~~H~   89 (89)
T 2wbs_A           82 ALHMKRHF   89 (89)
T ss_dssp             HHHGGGGC
T ss_pred             HHHHHhhC
Confidence            99999873

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.63  E-value=3.2e-16  Score=126.90  Aligned_cols=86  Identities=27%  Similarity=0.610  Sum_probs=80.2

Q ss_pred             cCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCC--CCcccCCCCCCCCChhhh
Q psy5888         254 TGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEAD--GPTILDDRNGGIPSPSMI  331 (447)
Q Consensus       254 ~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~e--kp~~C~~C~k~f~s~~~l  331 (447)
                      .++++|.|.+|++.|.+...|..|++ .|.++++|.|.+|++.|.+...|..|++.|+++  ++|.|..|++.|.....|
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L   81 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKL-SHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHL   81 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHH-HSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHH
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHH-hcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHH
Confidence            46889999999999999999999999 799999999999999999999999999999987  899999999999999999


Q ss_pred             hhccC-CCCC
Q psy5888         332 HNRCR-PPSG  340 (447)
Q Consensus       332 ~~H~~-~h~~  340 (447)
                      ..|++ .|..
T Consensus        82 ~~H~~~~H~~   91 (95)
T 2yt9_A           82 NGHIKQVHSG   91 (95)
T ss_dssp             HHHHHHTSCC
T ss_pred             HHHHHHhcCC
Confidence            99985 6654

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.62  E-value=7.5e-17  Score=134.56  Aligned_cols=86  Identities=23%  Similarity=0.445  Sum_probs=73.9

Q ss_pred             HhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCCCCCCCChhhh
Q psy5888         252 THTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDRNGGIPSPSMI  331 (447)
Q Consensus       252 ~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C~k~f~s~~~l  331 (447)
                      .|+++++|.| .|++.|.+...|.+|++ .|.++++|.|.+|++.|.+...|..|+++|+++++|.|..|++.|.....|
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   81 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMS-MHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSF   81 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHH-HHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHH
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHH-HcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHH
Confidence            5788899999 89999999999999998 798889999999999999999999999999988888888888877777777


Q ss_pred             hhccCCCC
Q psy5888         332 HNRCRPPS  339 (447)
Q Consensus       332 ~~H~~~h~  339 (447)
                      ..|++.|+
T Consensus        82 ~~H~~~~~   89 (110)
T 2csh_A           82 HRHVTSCT   89 (110)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHcc
Confidence            77765443

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.62  E-value=1.5e-16  Score=127.41  Aligned_cols=85  Identities=32%  Similarity=0.632  Sum_probs=79.3

Q ss_pred             CCCcccCC--CCCCcccchhhHHHHhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCCCCCCCChhhhh
Q psy5888         255 GEQPYKCK--YCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDRNGGIPSPSMIH  332 (447)
Q Consensus       255 ~ekp~~C~--~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C~k~f~s~~~l~  332 (447)
                      |+++|.|.  .|++.|.....|..|++ .|.++++|.|.+|++.|.....|..|+++|+++++|.|..|++.|.....|.
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   79 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERK   79 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHH-HHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHH
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHH-HhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHH
Confidence            46899998  59999999999999999 8999999999999999999999999999999999999999999999999999


Q ss_pred             hccCCCCC
Q psy5888         333 NRCRPPSG  340 (447)
Q Consensus       333 ~H~~~h~~  340 (447)
                      .|++.|.+
T Consensus        80 ~H~~~H~~   87 (90)
T 1a1h_A           80 RHTKIHLR   87 (90)
T ss_dssp             HHHGGGGC
T ss_pred             HHHHHhcc
Confidence            99988764

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.61  E-value=1.2e-16  Score=125.53  Aligned_cols=81  Identities=26%  Similarity=0.571  Sum_probs=76.7

Q ss_pred             cccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCCCCCCCChhhhhhccCC
Q psy5888         258 PYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDRNGGIPSPSMIHNRCRP  337 (447)
Q Consensus       258 p~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C~k~f~s~~~l~~H~~~  337 (447)
                      +|.|.+|++.|.....|..|++ .|.++++|.|.+|++.|.....|..|++.|+++++|.|..|++.|.....|..|++.
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   79 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLL-IHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRK   79 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHH-HHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHH-HcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHh
Confidence            5899999999999999999999 799999999999999999999999999999999999999999999999999999876


Q ss_pred             CC
Q psy5888         338 PS  339 (447)
Q Consensus       338 h~  339 (447)
                      |.
T Consensus        80 H~   81 (82)
T 2kmk_A           80 HT   81 (82)
T ss_dssp             HC
T ss_pred             hC
Confidence            64

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.59  E-value=1.9e-16  Score=131.78  Aligned_cols=87  Identities=15%  Similarity=0.165  Sum_probs=79.5

Q ss_pred             HHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCCCCCCCCh
Q psy5888         249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDRNGGIPSP  328 (447)
Q Consensus       249 H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C~k~f~s~  328 (447)
                      ++++|.++++|.|.+|++.|.....|..|++ .|  .++|.|.+|++.|.....|..|++ |.++++|.|..|++.|...
T Consensus         7 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~H--~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~   82 (107)
T 1wjp_A            7 GASPVENKEVYQCRLCNAKLSSLLEQGSHER-LC--RNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSS   82 (107)
T ss_dssp             CCCCCCCCCCCBCTTTCCBCSSHHHHHHHHH-HH--HHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSH
T ss_pred             cCcccCCCcCeECCCCCCccCCHHHHHHHHH-HC--CCCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCH
Confidence            4567899999999999999999999999999 68  468999999999999999999996 9999999999999999999


Q ss_pred             hhhhhccC-CCC
Q psy5888         329 SMIHNRCR-PPS  339 (447)
Q Consensus       329 ~~l~~H~~-~h~  339 (447)
                      ..|..|++ .|.
T Consensus        83 ~~L~~H~~~~H~   94 (107)
T 1wjp_A           83 FSIWRHQVEVHN   94 (107)
T ss_dssp             HHHHHHHHHTSC
T ss_pred             HHHHHHHHHHcC
Confidence            99999986 654

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.57  E-value=7.9e-16  Score=122.09  Aligned_cols=81  Identities=25%  Similarity=0.533  Sum_probs=71.0

Q ss_pred             HHHHHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCC---CCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCC
Q psy5888         245 NLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKE---KPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDR  321 (447)
Q Consensus       245 ~L~~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~---kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C  321 (447)
                      .|.+|+++|+++++|.|.+|++.|.....|.+|++..|...   ++|.|.+|++.|.+...|..|+++|++++++.|..|
T Consensus         2 s~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~   81 (86)
T 1x6h_A            2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENS   81 (86)
T ss_dssp             TTTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCC
T ss_pred             CcccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCC
Confidence            35678899999999999999999999999999988444443   789999999999999999999999999999999999


Q ss_pred             CCCC
Q psy5888         322 NGGI  325 (447)
Q Consensus       322 ~k~f  325 (447)
                      +..|
T Consensus        82 ~~~~   85 (86)
T 1x6h_A           82 GPSS   85 (86)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            8865

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.57  E-value=2e-16  Score=127.06  Aligned_cols=81  Identities=31%  Similarity=0.664  Sum_probs=75.7

Q ss_pred             CCccCCCCCCccCChHHHHHHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCCCcccCCchhHHHHHh
Q psy5888         229 DRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLK  308 (447)
Q Consensus       229 k~~~C~~Cgk~F~~~~~L~~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr  308 (447)
                      ++|.|.+|++.|.....|..|+++|+++++|.|.+|++.|.....|..|++ .|.+ .+|.|..|++.|.....|..|++
T Consensus         2 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~h~~-~~~~c~~C~~~f~~~~~L~~H~~   79 (88)
T 1llm_C            2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRD-IQHI-LPILEDKVEELLSKNYHLENEVA   79 (88)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHH-HHTH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHH-HhCC-CcchHHHHHHHHHHHhhhHHHHH
Confidence            679999999999999999999999999999999999999999999999999 5654 67999999999999999999998


Q ss_pred             hhc
Q psy5888         309 KHE  311 (447)
Q Consensus       309 ~H~  311 (447)
                      .++
T Consensus        80 ~~h   82 (88)
T 1llm_C           80 RLK   82 (88)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            765

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.57  E-value=1.9e-15  Score=113.96  Aligned_cols=58  Identities=33%  Similarity=0.816  Sum_probs=40.4

Q ss_pred             CCCccCCCCCCccCChHHHHHHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCC
Q psy5888         228 KDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEK  286 (447)
Q Consensus       228 ~k~~~C~~Cgk~F~~~~~L~~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~k  286 (447)
                      +++|.|.+||+.|.....|..|+++|+++++|.|.+|++.|.....|.+|++ +|+|++
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~-~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLK-VHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGG-GGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhC-ccCCCC
Confidence            3567777777777777777777777777777777777777777777777776 676653

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.57  E-value=1e-15  Score=115.36  Aligned_cols=58  Identities=38%  Similarity=0.893  Sum_probs=55.2

Q ss_pred             CCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCC
Q psy5888         256 EQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADG  314 (447)
Q Consensus       256 ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ek  314 (447)
                      ||||.|.+|++.|.....|.+|++ +|+++++|.|.+||+.|.+...|..|+++|++++
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~-~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRR-AHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHH-HHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHH-HhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            799999999999999999999999 8999999999999999999999999999999875

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.56  E-value=2.8e-15  Score=118.25  Aligned_cols=78  Identities=32%  Similarity=0.682  Sum_probs=73.7

Q ss_pred             CccC--CCCCCccCChHHHHHHHHHhcCCCcccCCC--CCCcccchhhHHHHhhhhccCCCCCCCCC---CCcccCCchh
Q psy5888         230 RYAC--KFCGKVFPRSANLTRHLRTHTGEQPYKCKY--CERSFSISSNLQRHVRNIHNKEKPFKCPL---CDRCFGQQTN  302 (447)
Q Consensus       230 ~~~C--~~Cgk~F~~~~~L~~H~r~H~~ekp~~C~~--C~k~F~s~~~L~~H~~~~H~~~kp~~C~~---C~k~F~~~~~  302 (447)
                      +|.|  ..|++.|.....|..|+++|.++++|.|.+  |++.|.+...|.+|++ .|.+   |.|.+   |++.|.....
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~---~~C~~~~~C~~~f~~~~~   76 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEK-VHAG---YPCKKDDSCSFVGKTWTL   76 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHH-HHHS---EECCSCSSCCCEESSHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHH-HhCC---CCCCCCCCCCCccCCHHH
Confidence            4889  889999999999999999999999999998  9999999999999998 7888   99999   9999999999


Q ss_pred             HHHHHhhhc
Q psy5888         303 LDRHLKKHE  311 (447)
Q Consensus       303 L~~Hlr~H~  311 (447)
                      |..|+++|+
T Consensus        77 l~~H~~~hh   85 (85)
T 2j7j_A           77 YLKHVAECH   85 (85)
T ss_dssp             HHHHHHHCC
T ss_pred             HHHHHHhcC
Confidence            999999875

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.53  E-value=7.4e-15  Score=114.84  Aligned_cols=70  Identities=24%  Similarity=0.736  Sum_probs=52.4

Q ss_pred             CCCccCCC--CCCccCChHHHHHHHH-HhcCCCcccCCC--CCCcccchhhHHHHhhhhccCCCCCCCCCCCcccC
Q psy5888         228 KDRYACKF--CGKVFPRSANLTRHLR-THTGEQPYKCKY--CERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFG  298 (447)
Q Consensus       228 ~k~~~C~~--Cgk~F~~~~~L~~H~r-~H~~ekp~~C~~--C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C~k~F~  298 (447)
                      .++|.|..  |++.|.+...|..|++ .|.++++|.|.+  |++.|.+...|.+|++ +|.++++|.|.+|++.|.
T Consensus         5 ~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A            5 SSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK-LHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             CSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHH-HHHTSCCCSCCSSSCCCC
T ss_pred             CCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHH-HhCCCCCeeCCCCCCCCC
Confidence            35577776  7777777777777777 577777777777  7777777777777777 677777777777777763

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.53  E-value=4.2e-15  Score=118.65  Aligned_cols=82  Identities=26%  Similarity=0.562  Sum_probs=77.7

Q ss_pred             CCcccCCC--CCCcccchhhHHHHhhhhccCCCCCCCC--CCCcccCCchhHHHHHhhhcCCCCcccCCCCCCCCChhhh
Q psy5888         256 EQPYKCKY--CERSFSISSNLQRHVRNIHNKEKPFKCP--LCDRCFGQQTNLDRHLKKHEADGPTILDDRNGGIPSPSMI  331 (447)
Q Consensus       256 ekp~~C~~--C~k~F~s~~~L~~H~~~~H~~~kp~~C~--~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C~k~f~s~~~l  331 (447)
                      .+.|.|.+  |++.|.....|..|++ .|.++++|.|.  .|++.|.....|..|+++|+++++|.|..|++.|.....|
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   81 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLR-THTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHL   81 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHT-TSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHH-hcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHH
Confidence            46799999  9999999999999999 89999999997  5999999999999999999999999999999999999999


Q ss_pred             hhccCCC
Q psy5888         332 HNRCRPP  338 (447)
Q Consensus       332 ~~H~~~h  338 (447)
                      ..|++.|
T Consensus        82 ~~H~~~H   88 (89)
T 2wbs_A           82 ALHMKRH   88 (89)
T ss_dssp             HHHGGGG
T ss_pred             HHHHHhh
Confidence            9998766

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.53  E-value=1.2e-14  Score=113.69  Aligned_cols=73  Identities=27%  Similarity=0.543  Sum_probs=69.0

Q ss_pred             cCCCcccCCC--CCCcccchhhHHHHhhhhccCCCCCCCCC--CCcccCCchhHHHHHhhhcCCCCcccCCCCCCCC
Q psy5888         254 TGEQPYKCKY--CERSFSISSNLQRHVRNIHNKEKPFKCPL--CDRCFGQQTNLDRHLKKHEADGPTILDDRNGGIP  326 (447)
Q Consensus       254 ~~ekp~~C~~--C~k~F~s~~~L~~H~~~~H~~~kp~~C~~--C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C~k~f~  326 (447)
                      +++++|.|..  |++.|.+...|..|++..|.++++|.|.+  |++.|.+...|..|+++|+++++|.|..|++.|.
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCCC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCCC
Confidence            5688999998  99999999999999985699999999999  9999999999999999999999999999999983

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.52  E-value=4.6e-15  Score=121.01  Aligned_cols=84  Identities=29%  Similarity=0.547  Sum_probs=78.0

Q ss_pred             CCCcccCCC--CCCcccchhhHHHHhhhhccCCCCCCCC--CCCcccCCchhHHHHHhhhcCCCCcccCCCCCCCCChhh
Q psy5888         255 GEQPYKCKY--CERSFSISSNLQRHVRNIHNKEKPFKCP--LCDRCFGQQTNLDRHLKKHEADGPTILDDRNGGIPSPSM  330 (447)
Q Consensus       255 ~ekp~~C~~--C~k~F~s~~~L~~H~~~~H~~~kp~~C~--~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C~k~f~s~~~  330 (447)
                      ..+.|.|.+  |++.|.....|..|++ .|.++++|.|.  .|++.|.....|..|+++|+++++|.|..|++.|.....
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   90 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLR-THTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDH   90 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHH-HHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHH
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHH-HhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHH
Confidence            357899997  9999999999999999 79999999996  599999999999999999999999999999999999999


Q ss_pred             hhhccCCCC
Q psy5888         331 IHNRCRPPS  339 (447)
Q Consensus       331 l~~H~~~h~  339 (447)
                      |..|++.|.
T Consensus        91 l~~H~~~H~   99 (100)
T 2ebt_A           91 LALHMKRHQ   99 (100)
T ss_dssp             HHHHHHHHC
T ss_pred             HHHHHHHhC
Confidence            999987664

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.52  E-value=4.7e-15  Score=121.95  Aligned_cols=82  Identities=16%  Similarity=0.297  Sum_probs=73.0

Q ss_pred             ccCChHHHHHHHHHhcCCCcccCCCCCCccc-chhhHHHHhhhhccC-CCCCCCCCCCcccCCchhHHHHHhhhcCCCCc
Q psy5888         239 VFPRSANLTRHLRTHTGEQPYKCKYCERSFS-ISSNLQRHVRNIHNK-EKPFKCPLCDRCFGQQTNLDRHLKKHEADGPT  316 (447)
Q Consensus       239 ~F~~~~~L~~H~r~H~~ekp~~C~~C~k~F~-s~~~L~~H~~~~H~~-~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~  316 (447)
                      .+.....+..|+++|.++++|.|.+|++.|. ....|.+|++ +|.+ +++|.|.+|++.|.+...|.+|+++|++++++
T Consensus         5 s~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~-~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~   83 (98)
T 2gqj_A            5 SSGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHME-VCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPS   83 (98)
T ss_dssp             CCCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHH-HHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSS
T ss_pred             CCCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHH-HHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCC
Confidence            4555567789999999999999999999999 9999999998 7888 99999999999999999999999999999986


Q ss_pred             ccCCC
Q psy5888         317 ILDDR  321 (447)
Q Consensus       317 ~C~~C  321 (447)
                      .....
T Consensus        84 ~~~~~   88 (98)
T 2gqj_A           84 DAEAS   88 (98)
T ss_dssp             CCCCC
T ss_pred             CCCCC
Confidence            55433

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.47  E-value=3.3e-14  Score=111.04  Aligned_cols=65  Identities=43%  Similarity=0.852  Sum_probs=55.4

Q ss_pred             CCCCCCccCCCCCCccCChHHHHHHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCC
Q psy5888         225 GKPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC  290 (447)
Q Consensus       225 ~~~~k~~~C~~Cgk~F~~~~~L~~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C  290 (447)
                      ...+++|.|.+|++.|.....|.+|+++|+++++|.|.+|++.|.....|.+|++ +|.++++|.|
T Consensus        13 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~-~H~~~~p~~C   77 (77)
T 2cot_A           13 QRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHR-VHTGSGPSSG   77 (77)
T ss_dssp             CCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGG-GSCCCCCCCC
T ss_pred             CCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHH-HhCCCCCCCC
Confidence            3345778898899999888888889888888888888888888888888888888 7888888887

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.47  E-value=6.6e-14  Score=109.30  Aligned_cols=66  Identities=39%  Similarity=0.741  Sum_probs=63.1

Q ss_pred             HhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCccc
Q psy5888         252 THTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTIL  318 (447)
Q Consensus       252 ~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C  318 (447)
                      .+.++++|.|.+|++.|.....|.+|++ .|.++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus        12 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           12 QQRERRRYKCDECGKSFSHSSDLSKHRR-THTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCCCSCSSBCSSSCCBCSCHHHHHHHHT-TTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             cCCCCCCEECCCCCcccCCHHHHHHHHH-HcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            4667899999999999999999999999 89999999999999999999999999999999999987

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.47  E-value=4.5e-16  Score=124.94  Aligned_cols=78  Identities=31%  Similarity=0.632  Sum_probs=55.0

Q ss_pred             CCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCCCCCCCChhhhhhcc
Q psy5888         256 EQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDRNGGIPSPSMIHNRC  335 (447)
Q Consensus       256 ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C~k~f~s~~~l~~H~  335 (447)
                      +++|.|.+|++.|.....|..|++ .|.++++|.|.+|++.|.....|..|++.|++ .+|.|..|++.|.....|..|+
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H~   78 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIR-THTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENEV   78 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHH-HHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHH-HcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhHHHH
Confidence            467888888888888888888887 68888888888888888888888888887763 4454444444444444444443

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.45  E-value=1e-13  Score=114.05  Aligned_cols=78  Identities=14%  Similarity=0.290  Sum_probs=69.7

Q ss_pred             CCccCChHHHHHHHHHhcCCCcccCCCCCCcc-cchhhHHHHhhhhccCCCCCCCCCCCcccCCchhHHHH-HhhhcCCC
Q psy5888         237 GKVFPRSANLTRHLRTHTGEQPYKCKYCERSF-SISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRH-LKKHEADG  314 (447)
Q Consensus       237 gk~F~~~~~L~~H~r~H~~ekp~~C~~C~k~F-~s~~~L~~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~H-lr~H~~ek  314 (447)
                      ...|.....|..|++.|.++++|.|.+|++.| .....|..|++ +| ++++|.|.+|++.|.+...|..| +++|.++.
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~-~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p   90 (96)
T 2ctd_A           13 PPVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHME-NC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLP   90 (96)
T ss_dssp             CCSSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHH-HH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCS
T ss_pred             CCCCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHH-HH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCCC
Confidence            34667788999999999999999999999999 99999999999 79 99999999999999999999999 88887644


Q ss_pred             Cc
Q psy5888         315 PT  316 (447)
Q Consensus       315 p~  316 (447)
                      .|
T Consensus        91 ~~   92 (96)
T 2ctd_A           91 SG   92 (96)
T ss_dssp             SC
T ss_pred             CC
Confidence            33

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.43  E-value=3.6e-14  Score=111.85  Aligned_cols=78  Identities=23%  Similarity=0.417  Sum_probs=71.0

Q ss_pred             cccC--CCCCCcccchhhHHHHhhhhccCCCCCCCCC--CCcccCCchhHHHHHhhhcCCCCcccCC---CCCCCCChhh
Q psy5888         258 PYKC--KYCERSFSISSNLQRHVRNIHNKEKPFKCPL--CDRCFGQQTNLDRHLKKHEADGPTILDD---RNGGIPSPSM  330 (447)
Q Consensus       258 p~~C--~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~--C~k~F~~~~~L~~Hlr~H~~ekp~~C~~---C~k~f~s~~~  330 (447)
                      ||.|  ..|++.|.....|..|++ .|.++++|.|.+  |++.|.....|..|+++|++   |.|..   |++.|.....
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~   76 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQF-SHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTL   76 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHH-HHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHH-HhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHH
Confidence            5899  889999999999999998 899999999988  99999999999999999998   99998   9999888888


Q ss_pred             hhhccCCCC
Q psy5888         331 IHNRCRPPS  339 (447)
Q Consensus       331 l~~H~~~h~  339 (447)
                      |..|++.|+
T Consensus        77 l~~H~~~hh   85 (85)
T 2j7j_A           77 YLKHVAECH   85 (85)
T ss_dssp             HHHHHHHCC
T ss_pred             HHHHHHhcC
Confidence            888876653

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.42  E-value=1.2e-13  Score=107.02  Aligned_cols=61  Identities=41%  Similarity=0.868  Sum_probs=47.0

Q ss_pred             CCCCccCCCCCCccCChHHHHHHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCC
Q psy5888         227 PKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPF  288 (447)
Q Consensus       227 ~~k~~~C~~Cgk~F~~~~~L~~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~  288 (447)
                      ..++|.|.+|++.|.....|..|+++|+++++|.|.+|++.|.+...|.+|++ +|.++++|
T Consensus        14 ~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~kp~   74 (74)
T 2lce_A           14 SDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTR-IHSGEKPY   74 (74)
T ss_dssp             CCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHH-HHCCSCCC
T ss_pred             CCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHH-hcCCCCCC
Confidence            34667888888888888888888888877777888888888887777888877 67777765

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.42  E-value=6e-14  Score=117.03  Aligned_cols=64  Identities=27%  Similarity=0.489  Sum_probs=33.9

Q ss_pred             CCCccCCCCCCccCChHHHHHHHH-Hh---cCCCcccCCCCCCcccchhhHHHH-hhhhccCCCCCCCCC
Q psy5888         228 KDRYACKFCGKVFPRSANLTRHLR-TH---TGEQPYKCKYCERSFSISSNLQRH-VRNIHNKEKPFKCPL  292 (447)
Q Consensus       228 ~k~~~C~~Cgk~F~~~~~L~~H~r-~H---~~ekp~~C~~C~k~F~s~~~L~~H-~~~~H~~~kp~~C~~  292 (447)
                      +++|.|.+|++.|.....|.+|++ +|   .++++|.|.+|++.|.....|.+| ++ +|+++++|.|.+
T Consensus        16 ekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r-~Htgekpy~C~~   84 (102)
T 2ghf_A           16 EGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLK-YHPGEENFKLTM   84 (102)
T ss_dssp             CSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHH-TSTTCCCEEEEE
T ss_pred             CcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHH-hcCCCCCeeCCc
Confidence            344555555555555555555554 35   334555555555555555555555 34 455555555554

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.41  E-value=2.9e-13  Score=104.76  Aligned_cols=64  Identities=34%  Similarity=0.804  Sum_probs=61.1

Q ss_pred             HhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCc
Q psy5888         252 THTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPT  316 (447)
Q Consensus       252 ~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~  316 (447)
                      .+.++++|.|.+|++.|.....|.+|++ .|.++++|.|.+|++.|.+...|.+|+++|+++++|
T Consensus        11 ~~~~~~~~~C~~C~k~f~~~~~l~~H~~-~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           11 MTHSDKPYKCDRCQASFRYKGNLASHKT-VHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCCCSBCCTTSSCCBSCHHHHHHHHH-HHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             ccCCCCCeECCCCCceeCCHHHHHHHHH-HcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            5678899999999999999999999999 899999999999999999999999999999999986

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.40  E-value=4.1e-14  Score=110.52  Aligned_cols=67  Identities=33%  Similarity=0.746  Sum_probs=56.4

Q ss_pred             HHHHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCC-CCCCCCCCCcccCCchhHHHHHhhhcC
Q psy5888         246 LTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKE-KPFKCPLCDRCFGQQTNLDRHLKKHEA  312 (447)
Q Consensus       246 L~~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~-kp~~C~~C~k~F~~~~~L~~Hlr~H~~  312 (447)
                      |.+|+++|+++++|.|.+|++.|.....|.+|++..|.++ ++|.|.+|++.|.+...|..|+++|++
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~   70 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHS   70 (77)
T ss_dssp             CCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             CCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCC
Confidence            4568888888999999999999999999999986567764 789999999999999999999888654

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.39  E-value=1.1e-13  Score=106.74  Aligned_cols=62  Identities=42%  Similarity=0.821  Sum_probs=40.3

Q ss_pred             HHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCC
Q psy5888         251 RTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEAD  313 (447)
Q Consensus       251 r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~e  313 (447)
                      ++|.++++|.|.+|++.|.....|.+|++ .|.++++|.|.+|++.|.+...|..|+++|+++
T Consensus         7 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~   68 (72)
T 1x6e_A            7 GIHSGEKPYGCVECGKAFSRSSILVQHQR-VHTGEKPYKCLECGKAFSQNSGLINHQRIHTSG   68 (72)
T ss_dssp             CTTTTCCCEECSSSCCEESSHHHHHHHHH-GGGCSCCEECSSSCCEESSHHHHHHHHHHHHSS
T ss_pred             cccCCCCCccCCCCCCccCCHHHHHHHHH-hcCCCCCeECCCCCcccCCHHHHHHHHHhcCCC
Confidence            35666666666666666666666666666 566666666666666666666666666666554

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.39  E-value=2.1e-13  Score=104.42  Aligned_cols=62  Identities=37%  Similarity=0.642  Sum_probs=37.6

Q ss_pred             hcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCC
Q psy5888         253 HTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGP  315 (447)
Q Consensus       253 H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp  315 (447)
                      |.++++|.|.+|++.|.....|.+|++ +|.++++|.|.+|++.|.+...|..|+++|+++++
T Consensus         4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p   65 (70)
T 1x5w_A            4 GSSGHPEKCSECSYSCSSKAALRIHER-IHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS   65 (70)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHG-GGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHH-HcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCC
Confidence            445566666666666666666666665 46666666666666666666666666666665554

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.38  E-value=2.1e-13  Score=113.76  Aligned_cols=72  Identities=24%  Similarity=0.334  Sum_probs=65.5

Q ss_pred             hcCCCcccCCCCCCcccchhhHHHHhhhhc---cCCCCCCCCCCCcccCCchhHHHH-HhhhcCCCCcccCCCCCC
Q psy5888         253 HTGEQPYKCKYCERSFSISSNLQRHVRNIH---NKEKPFKCPLCDRCFGQQTNLDRH-LKKHEADGPTILDDRNGG  324 (447)
Q Consensus       253 H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H---~~~kp~~C~~C~k~F~~~~~L~~H-lr~H~~ekp~~C~~C~k~  324 (447)
                      ..|+++|.|.+|++.|.....|.+|++.+|   .++++|.|.+|++.|.+...|..| +++|.++++|.|..+...
T Consensus        13 ~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~~~   88 (102)
T 2ghf_A           13 KKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVKRN   88 (102)
T ss_dssp             CCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECCCS
T ss_pred             CCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCcccCC
Confidence            467899999999999999999999997459   678999999999999999999999 899999999999976543

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.36  E-value=5.7e-13  Score=107.38  Aligned_cols=60  Identities=33%  Similarity=0.678  Sum_probs=54.2

Q ss_pred             CCCCccCCCCCCccCChHHHHHHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCC
Q psy5888         227 PKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEK  286 (447)
Q Consensus       227 ~~k~~~C~~Cgk~F~~~~~L~~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~k  286 (447)
                      ..+.|.|.+|++.|.+...|.+|+++|+++++|.|.+|++.|.+...|.+|++.+|.++.
T Consensus        25 ~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           25 SAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             CCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            346799999999999999999999999999999999999999999999999876898764

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.36  E-value=1e-12  Score=103.98  Aligned_cols=70  Identities=19%  Similarity=0.400  Sum_probs=65.1

Q ss_pred             CCCCccCCCCCCccCChHHHHHHHHHhcCC----CcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCCCccc
Q psy5888         227 PKDRYACKFCGKVFPRSANLTRHLRTHTGE----QPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCF  297 (447)
Q Consensus       227 ~~k~~~C~~Cgk~F~~~~~L~~H~r~H~~e----kp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C~k~F  297 (447)
                      .+++|.|.+|++.|.....|..|++.|+.+    ++|.|.+|++.|.....|..|++ +|.+++++.|..|+..|
T Consensus        12 ~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~-~h~~~~~~~~~~~~~~~   85 (86)
T 1x6h_A           12 GEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHAD-NCAGPDGVEGENSGPSS   85 (86)
T ss_dssp             CCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHH-HCCCCCSCCCCCCCCCC
T ss_pred             CCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHH-HccCCCCcccCCCCCCC
Confidence            357899999999999999999999988775    78999999999999999999999 89999999999999876

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.35  E-value=2.1e-14  Score=123.13  Aligned_cols=107  Identities=17%  Similarity=0.227  Sum_probs=67.8

Q ss_pred             CCCccCCCCCCccCChHHHHHHHHHhc---CCCcccCCCCCCccc------chhhHHHHhhhhccCCCCCCCCCCCcccC
Q psy5888         228 KDRYACKFCGKVFPRSANLTRHLRTHT---GEQPYKCKYCERSFS------ISSNLQRHVRNIHNKEKPFKCPLCDRCFG  298 (447)
Q Consensus       228 ~k~~~C~~Cgk~F~~~~~L~~H~r~H~---~ekp~~C~~C~k~F~------s~~~L~~H~~~~H~~~kp~~C~~C~k~F~  298 (447)
                      .++|.|.+++....  ..+..|++.+.   .++.+.|.+|.+.|.      ....|..|++  |.++++|.|.+|++.|.
T Consensus        10 ~k~~~~~~k~~~~~--~s~ee~~~~~~l~~~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~~--h~~~~~~~C~~C~k~f~   85 (129)
T 2wbt_A           10 SKKYLSNHKGIFIH--VTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLA--SKAISQFVCPLCLMPFS   85 (129)
T ss_dssp             CCGGGGCSSCEEEE--CCHHHHHHHTTSCHHHHHHHHHHHHHHHHCGGGTTTHHHHHHHHH--HHHHCSEECTTTCCEES
T ss_pred             ccccccccCCeeee--ecHHhhhccccCChhhCcccchhhhcccCCCcccCCHHHHHHHHH--hCCCCCeECCCCCcccC
Confidence            45677666443221  12333433322   235566776655444      5556666653  66777777777777777


Q ss_pred             CchhHHHHHhhhcCCCCcccCCCCCCCCChhhhhhccCCCCC
Q psy5888         299 QQTNLDRHLKKHEADGPTILDDRNGGIPSPSMIHNRCRPPSG  340 (447)
Q Consensus       299 ~~~~L~~Hlr~H~~ekp~~C~~C~k~f~s~~~l~~H~~~h~~  340 (447)
                      ....|..|+++|  +++|.|+.|++.|.....|..|++.|++
T Consensus        86 ~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~  125 (129)
T 2wbt_A           86 SSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHN  125 (129)
T ss_dssp             SHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHHTTC
T ss_pred             CHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHHHCC
Confidence            777777777777  6777777777777777777777776654

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.35  E-value=1.1e-13  Score=118.71  Aligned_cols=81  Identities=25%  Similarity=0.423  Sum_probs=71.9

Q ss_pred             CCccCCCCCCccC------ChHHHHHHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCCCcccCCchh
Q psy5888         229 DRYACKFCGKVFP------RSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTN  302 (447)
Q Consensus       229 k~~~C~~Cgk~F~------~~~~L~~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C~k~F~~~~~  302 (447)
                      +.+.|.+|++.|.      ....|..|+ .|+++++|.|.+|++.|.....|..|++ +|  +++|.|.+|++.|.+...
T Consensus        40 ~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~-~H--~~~~~C~~C~k~f~~~~~  115 (129)
T 2wbt_A           40 KRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPLCLMPFSSSVSLKQHIR-YT--EHTKVCPVCKKEFTSTDS  115 (129)
T ss_dssp             HHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTTTCCEESSHHHHHHHHH-HT--CCCCBCTTTCCBCSSHHH
T ss_pred             CcccchhhhcccCCCcccCCHHHHHHHH-HhCCCCCeECCCCCcccCCHhHHHHHHH-HC--CCCCCCCCCCcccCCHHH
Confidence            4578888766554      667777777 6889999999999999999999999999 78  889999999999999999


Q ss_pred             HHHHHhhhcCC
Q psy5888         303 LDRHLKKHEAD  313 (447)
Q Consensus       303 L~~Hlr~H~~e  313 (447)
                      |..|+++|++.
T Consensus       116 l~~H~~~h~~~  126 (129)
T 2wbt_A          116 ALDHVCKKHNI  126 (129)
T ss_dssp             HHHHHHHTTCC
T ss_pred             HHHHHHHHCCc
Confidence            99999999875

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=5.7e-15  Score=113.23  Aligned_cols=71  Identities=21%  Similarity=0.336  Sum_probs=63.6

Q ss_pred             hHHHHHHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCC
Q psy5888         243 SANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDR  321 (447)
Q Consensus       243 ~~~L~~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C  321 (447)
                      ...|..|+++|.++++|.|.+|++.|.....|..        +++|.|.+|++.|.+...|..|+++|+++++|.|+.|
T Consensus         3 ~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~--------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A            3 SGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR--------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CCSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC--------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             chhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc--------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            3467789999999999999999999999888765        6789999999999999999999999999999999887

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.32  E-value=4.5e-13  Score=101.09  Aligned_cols=62  Identities=34%  Similarity=0.677  Sum_probs=50.9

Q ss_pred             HHhcCCCcccCCCCCCcccchhhHHHHhhhhc-cCCCCCCCCCCCcccCCchhHHHHHhhhcC
Q psy5888         251 RTHTGEQPYKCKYCERSFSISSNLQRHVRNIH-NKEKPFKCPLCDRCFGQQTNLDRHLKKHEA  312 (447)
Q Consensus       251 r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H-~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~  312 (447)
                      ++|.++++|.|.+|++.|.+...|..|++..| .++++|.|.+|++.|.+...|..|++.|++
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            46788888888888888888888888887437 578888888888888888888888888765

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.32  E-value=1.5e-12  Score=99.52  Aligned_cols=62  Identities=26%  Similarity=0.486  Sum_probs=57.6

Q ss_pred             CCCCCccCCCCCCccCChHHHHHHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCC
Q psy5888         226 KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPF  288 (447)
Q Consensus       226 ~~~k~~~C~~Cgk~F~~~~~L~~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~  288 (447)
                      ..+++|.|.+|++.|.....|.+|+++|+++++|.|.+|++.|.....|.+|++ .|.++++.
T Consensus         5 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~-~h~~~~p~   66 (70)
T 1x5w_A            5 SSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMK-KFHGDMSG   66 (70)
T ss_dssp             CCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHH-HHHSSSCC
T ss_pred             CCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHH-HHhCCCCC
Confidence            345789999999999999999999999999999999999999999999999999 78888764

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.30  E-value=1.2e-12  Score=95.62  Aligned_cols=51  Identities=43%  Similarity=0.923  Sum_probs=29.8

Q ss_pred             CCccCCCCCCccCChHHHHHHHHHhcCCCcccCCCCCCcccchhhHHHHhh
Q psy5888         229 DRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVR  279 (447)
Q Consensus       229 k~~~C~~Cgk~F~~~~~L~~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~  279 (447)
                      ++|.|.+|++.|.....|..|+++|+++++|.|.+|++.|.....|..|++
T Consensus         3 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   53 (57)
T 3uk3_C            3 SSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLE   53 (57)
T ss_dssp             --CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHH
T ss_pred             CCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHH
Confidence            445666666666666666666666666666666666666666666666655

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=5.5e-13  Score=109.44  Aligned_cols=74  Identities=11%  Similarity=0.128  Sum_probs=66.4

Q ss_pred             CcccchhhHHHHhhhhccCCCCCCCCCCCcccC-CchhHHHHHhhhcC-CCCcccCCCCCCCCChhhhhhccCCCCC
Q psy5888         266 RSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFG-QQTNLDRHLKKHEA-DGPTILDDRNGGIPSPSMIHNRCRPPSG  340 (447)
Q Consensus       266 k~F~s~~~L~~H~~~~H~~~kp~~C~~C~k~F~-~~~~L~~Hlr~H~~-ekp~~C~~C~k~f~s~~~l~~H~~~h~~  340 (447)
                      ..+.....+..|++ +|.++++|.|.+|++.|. ....|..|+++|++ +++|.|..|++.|.....|..|++.|+.
T Consensus         4 ~s~~~~~~~~~h~~-~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~   79 (98)
T 2gqj_A            4 GSSGPGGPEEQWQR-AIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHS   79 (98)
T ss_dssp             CCCCCCCSCSHHHH-TTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSC
T ss_pred             CCCCCCCcHHHHHH-HhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcC
Confidence            45666778889998 899999999999999999 99999999999998 9999999999999998888888877664

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.27  E-value=4.1e-12  Score=92.77  Aligned_cols=55  Identities=38%  Similarity=0.846  Sum_probs=37.1

Q ss_pred             ccCCCCCCccCChHHHHHHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCC
Q psy5888         231 YACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEK  286 (447)
Q Consensus       231 ~~C~~Cgk~F~~~~~L~~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~k  286 (447)
                      |.|.+|++.|.....|..|+++|+++++|.|.+|++.|.+...|.+|++ .|.+++
T Consensus         2 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~k   56 (57)
T 1bbo_A            2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMK-SKAHSK   56 (57)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHH-SSSSCC
T ss_pred             CcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHH-HhcccC
Confidence            6666777777777777777776666666777767777766666666666 555543

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.26  E-value=4.5e-12  Score=93.66  Aligned_cols=56  Identities=39%  Similarity=0.905  Sum_probs=41.3

Q ss_pred             CccCCCCCCccCChHHHHHHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCC
Q psy5888         230 RYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKE  285 (447)
Q Consensus       230 ~~~C~~Cgk~F~~~~~L~~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~  285 (447)
                      +|.|.+|++.|.....|.+|+++|+++++|.|.+|++.|.+...|.+|++.+|.++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             cCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            57777777777777777777777777777777777777777777777764366654

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.26  E-value=5e-12  Score=97.27  Aligned_cols=60  Identities=47%  Similarity=0.853  Sum_probs=55.8

Q ss_pred             CCCCCccCCCCCCccCChHHHHHHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCC
Q psy5888         226 KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEK  286 (447)
Q Consensus       226 ~~~k~~~C~~Cgk~F~~~~~L~~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~k  286 (447)
                      ..+++|.|.+|++.|.....|.+|+++|+++++|.|.+|++.|.+...|.+|++ +|.++.
T Consensus        10 ~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~-~H~~~~   69 (72)
T 1x6e_A           10 SGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQR-IHTSGP   69 (72)
T ss_dssp             TTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHH-HHHSSS
T ss_pred             CCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHH-hcCCCC
Confidence            445789999999999999999999999999999999999999999999999999 787764

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.26  E-value=2.6e-12  Score=100.26  Aligned_cols=54  Identities=22%  Similarity=0.538  Sum_probs=26.4

Q ss_pred             hcCCCcccCCCCCCcccchhhHHHHhhhhccC---CCCCCCCCCCcccCCchhHHHHH
Q psy5888         253 HTGEQPYKCKYCERSFSISSNLQRHVRNIHNK---EKPFKCPLCDRCFGQQTNLDRHL  307 (447)
Q Consensus       253 H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~---~kp~~C~~C~k~F~~~~~L~~Hl  307 (447)
                      |+++++|.|.+|++.|.....|.+|++ +|.+   +++|.|.+|++.|.....|..|+
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~-~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~   58 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQR-KHAETVAALRFPCEFCGKRFEKPDSVAAHR   58 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHH-HHHHHTTTCCEECTTTCCEESSHHHHHHHH
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHH-HhhccCCCcccCCCCCCchhCCHHHHHHHH
Confidence            444445555555555555555555544 3442   44455555555555555555554

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.26  E-value=4e-12  Score=92.81  Aligned_cols=56  Identities=29%  Similarity=0.683  Sum_probs=52.4

Q ss_pred             cccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCC
Q psy5888         258 PYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADG  314 (447)
Q Consensus       258 p~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ek  314 (447)
                      ||.|.+|++.|.....|..|++ .|.++++|.|.+|++.|.+...|..|+++|++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIR-THTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHH-HTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHH-hcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            6899999999999999999998 7999999999999999999999999999998765

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.26  E-value=3e-12  Score=103.16  Aligned_cols=63  Identities=24%  Similarity=0.515  Sum_probs=53.8

Q ss_pred             HHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCCCcccCCchhHHHHHh-hhcCCC
Q psy5888         251 RTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLK-KHEADG  314 (447)
Q Consensus       251 r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr-~H~~ek  314 (447)
                      ..+...++|.|++|++.|.+...|.+|++ +|.++++|.|.+|++.|.+...|.+|++ .|.+|.
T Consensus        21 ~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           21 GLSASAECHLCPVCGESFASKGAQERHLR-LLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             SSCCCCTTEECTTSCCEESSHHHHHHHHH-TTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCCCCCEECCCCCCCcCcHHHHhhhhh-hccCCCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            34667788999999999999999999998 7999999999999999999999999974 576653

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.25  E-value=4.6e-12  Score=92.52  Aligned_cols=57  Identities=37%  Similarity=0.790  Sum_probs=50.8

Q ss_pred             CCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcC
Q psy5888         255 GEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEA  312 (447)
Q Consensus       255 ~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~  312 (447)
                      |+++|.|.+|++.|.+...|..|++ +|.++++|.|.+|++.|.....|..|+++|++
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLR-THTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHH-HHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCCCCcchhCChHHHHHHHH-HcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            4689999999999999999999999 89999999999999999999999999999874

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.25  E-value=6.7e-12  Score=97.89  Aligned_cols=66  Identities=20%  Similarity=0.409  Sum_probs=59.7

Q ss_pred             CCCCccCCCCCCccCChHHHHHHHHHhcC---CCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCC
Q psy5888         227 PKDRYACKFCGKVFPRSANLTRHLRTHTG---EQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPL  292 (447)
Q Consensus       227 ~~k~~~C~~Cgk~F~~~~~L~~H~r~H~~---ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~  292 (447)
                      .+++|.|.+|++.|.....|.+|+++|++   +++|.|.+|++.|.....|.+|++..|.++++.....
T Consensus         4 ~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~   72 (78)
T 2d9h_A            4 GSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQES   72 (78)
T ss_dssp             SCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSCCSSS
T ss_pred             CCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCCcccc
Confidence            45789999999999999999999999996   8999999999999999999999976899888765543

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.23  E-value=1.1e-11  Score=101.79  Aligned_cols=61  Identities=18%  Similarity=0.378  Sum_probs=55.3

Q ss_pred             CCCccCCCCCCcc-CChHHHHHHHHHhcCCCcccCCCCCCcccchhhHHHH-hhhhccCCCCCCC
Q psy5888         228 KDRYACKFCGKVF-PRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRH-VRNIHNKEKPFKC  290 (447)
Q Consensus       228 ~k~~~C~~Cgk~F-~~~~~L~~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H-~~~~H~~~kp~~C  290 (447)
                      +++|.|.+|++.| .....|..|+++| ++++|.|.+|++.|.....|..| ++ +|+++..|.+
T Consensus        32 ~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~-~H~~~p~~~~   94 (96)
T 2ctd_A           32 KGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMA-NHNSLPSGPS   94 (96)
T ss_dssp             TSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHH-HTCCCSSCSC
T ss_pred             CCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHH-hcCCCCCCCC
Confidence            4679999999999 9999999999999 99999999999999999999999 77 8987654443

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.22  E-value=1.8e-11  Score=98.81  Aligned_cols=61  Identities=26%  Similarity=0.433  Sum_probs=39.1

Q ss_pred             CccCCCCCCccCChHHHHHHHHH-hcCCCc--------ccCCCCCCcccchhhHHHHhhhhccCCCCCCCC
Q psy5888         230 RYACKFCGKVFPRSANLTRHLRT-HTGEQP--------YKCKYCERSFSISSNLQRHVRNIHNKEKPFKCP  291 (447)
Q Consensus       230 ~~~C~~Cgk~F~~~~~L~~H~r~-H~~ekp--------~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~  291 (447)
                      .|.|.+|++.|.....|.+|+++ |.++++        |.|.+|++.|.....|.+|++ +|+++++|.|.
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~   94 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIR-VHTGEKSGPSS   94 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHH-HHHTCCCCSSC
T ss_pred             CCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHH-hcCCCCCCCCC
Confidence            46788888888888888888876 777666        555555555555555555555 45555555553

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.20  E-value=3.3e-12  Score=98.29  Aligned_cols=51  Identities=49%  Similarity=1.030  Sum_probs=25.0

Q ss_pred             CCccCC--CCCCccCChHHHHHHHHHhcCCCcccCCCCCCcccchhhHHHHhh
Q psy5888         229 DRYACK--FCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVR  279 (447)
Q Consensus       229 k~~~C~--~Cgk~F~~~~~L~~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~  279 (447)
                      ++|.|.  .|++.|.....|.+|+++|.++++|.|.+|++.|.+...|.+|++
T Consensus        18 ~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   70 (73)
T 1f2i_G           18 RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIR   70 (73)
T ss_dssp             CCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHT
T ss_pred             CccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHH
Confidence            344553  255555555555555555544444555555555555555555444

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.17  E-value=3.7e-12  Score=99.21  Aligned_cols=67  Identities=22%  Similarity=0.336  Sum_probs=59.9

Q ss_pred             hHHHHhhhhccCCCCCCCCCCCcccCCchhHHHHHh-hhcCC-CCcccCCCCCCCCChhhhhhccCCCCC
Q psy5888         273 NLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLK-KHEAD-GPTILDDRNGGIPSPSMIHNRCRPPSG  340 (447)
Q Consensus       273 ~L~~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr-~H~~e-kp~~C~~C~k~f~s~~~l~~H~~~h~~  340 (447)
                      .|.+|++ +|.++++|.|.+|++.|.+...|..|++ .|.++ ++|.|..|++.|.....|..|++.++.
T Consensus         2 s~~~H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~   70 (77)
T 2ct1_A            2 SSGSSGR-THSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHS   70 (77)
T ss_dssp             CCCCCCC-CCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             CCCcccc-ccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCC
Confidence            3568998 8999999999999999999999999997 57664 899999999999999999999887764

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.17  E-value=1.8e-11  Score=90.33  Aligned_cols=56  Identities=39%  Similarity=0.857  Sum_probs=48.0

Q ss_pred             CcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCCCcccCCchhHHHHH-hhhcCC
Q psy5888         257 QPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHL-KKHEAD  313 (447)
Q Consensus       257 kp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hl-r~H~~e  313 (447)
                      ++|.|.+|++.|.+...|.+|++ .|.++++|.|.+|++.|.+...|..|+ +.|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYR-SHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHH-TTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHH-HhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            47889999999999999999988 788888999999999999999999997 566654

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.17  E-value=2.6e-11  Score=97.79  Aligned_cols=62  Identities=24%  Similarity=0.360  Sum_probs=57.9

Q ss_pred             cccCCCCCCcccchhhHHHHhhhhccCCCC--------CCCCCCCcccCCchhHHHHHhhhcCCCCcccC
Q psy5888         258 PYKCKYCERSFSISSNLQRHVRNIHNKEKP--------FKCPLCDRCFGQQTNLDRHLKKHEADGPTILD  319 (447)
Q Consensus       258 p~~C~~C~k~F~s~~~L~~H~~~~H~~~kp--------~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~  319 (447)
                      .|.|..|++.|.....|.+|++..|.++++        |.|.+|++.|.....|..|+++|+++++|.|+
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            468999999999999999999833999887        99999999999999999999999999999996

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.12  E-value=2e-11  Score=93.84  Aligned_cols=64  Identities=39%  Similarity=0.859  Sum_probs=43.2

Q ss_pred             HHHHHH-HhcCCCcccCC--CCCCcccchhhHHHHhhhhccCCCCCCCCCCCcccCCchhHHHHHhhh
Q psy5888         246 LTRHLR-THTGEQPYKCK--YCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH  310 (447)
Q Consensus       246 L~~H~r-~H~~ekp~~C~--~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H  310 (447)
                      |..|+. +|.++++|.|+  .|++.|.....|.+|++ .|.++++|.|.+|++.|.+...|..|+++|
T Consensus         6 ~~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   72 (73)
T 1f2i_G            6 MNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHIRTH   72 (73)
T ss_dssp             --CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHH-HHHCCCCEECTTTCCEESCHHHHHHHHTTC
T ss_pred             ccchhhccCCCCCccCCcCCCCCCccCCHHHHHHHHH-hhCCCCCeECCCCCchhCCHHHHHHHHHhc
Confidence            333443 45667777776  37777777777777776 677777777777777777777777777766

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.09  E-value=6.3e-11  Score=89.11  Aligned_cols=55  Identities=35%  Similarity=0.804  Sum_probs=50.6

Q ss_pred             CCCccCCCCCCccCChHHHHHHHHH-h-cCCCcccCCCCCCcccchhhHHHHhhhhc
Q psy5888         228 KDRYACKFCGKVFPRSANLTRHLRT-H-TGEQPYKCKYCERSFSISSNLQRHVRNIH  282 (447)
Q Consensus       228 ~k~~~C~~Cgk~F~~~~~L~~H~r~-H-~~ekp~~C~~C~k~F~s~~~L~~H~~~~H  282 (447)
                      +++|.|.+|++.|.....|..|+++ | .++++|.|.+|++.|.+...|..|++..|
T Consensus         8 ~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H   64 (66)
T 2drp_A            8 EHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIH   64 (66)
T ss_dssp             TTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHT
T ss_pred             CcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHc
Confidence            4789999999999999999999998 7 58999999999999999999999999433

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=6.7e-11  Score=89.47  Aligned_cols=56  Identities=20%  Similarity=0.386  Sum_probs=35.6

Q ss_pred             CCCccCCCCCCccCChHHHHHHHHHhcCCCcccCC-CCCCcccchhhHHHHhhhhccCCC
Q psy5888         228 KDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCK-YCERSFSISSNLQRHVRNIHNKEK  286 (447)
Q Consensus       228 ~k~~~C~~Cgk~F~~~~~L~~H~r~H~~ekp~~C~-~C~k~F~s~~~L~~H~~~~H~~~k  286 (447)
                      .++|.|.+|++.|. ...|..|+++ +++++|.|. .|++.|.....|..|++ +|...+
T Consensus         8 ~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~-~hc~~~   64 (66)
T 2eod_A            8 KRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLK-DSCNTA   64 (66)
T ss_dssp             CCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHH-TTSSSC
T ss_pred             CCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHH-hhcccC
Confidence            34566666666666 6666666666 666666666 66666666666666666 455443

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=1.1e-10  Score=88.30  Aligned_cols=60  Identities=25%  Similarity=0.497  Sum_probs=55.0

Q ss_pred             hcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCC-CCCcccCCchhHHHHHhhhcCCCC
Q psy5888         253 HTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCP-LCDRCFGQQTNLDRHLKKHEADGP  315 (447)
Q Consensus       253 H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~-~C~k~F~~~~~L~~Hlr~H~~ekp  315 (447)
                      +.++++|.|.+|++.|. ...|..|++ + .++++|.|. .|++.|.....|..|+++|...++
T Consensus         5 ~C~~~~~~C~~C~k~f~-~~~L~~H~~-~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            5 SSGKRTQPCTYCTKEFV-FDTIQSHQY-Q-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CCCCCEEECSSSCCEEE-HHHHHHHHH-H-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             cCCCCCeeccccCCccC-HHHHHHHHH-H-cCCcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            45678999999999999 999999998 6 899999999 999999999999999999976654

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.01  E-value=8e-11  Score=82.22  Aligned_cols=44  Identities=32%  Similarity=0.508  Sum_probs=21.6

Q ss_pred             HHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCC
Q psy5888         249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLC  293 (447)
Q Consensus       249 H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C  293 (447)
                      |+++|+++++|.|.+|++.|.....|.+|++ +|.++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~~~~~C~~C   46 (46)
T 2em0_A            3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQN-VHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCCCCSSSCCCCSSHHHHHHHGG-GGSSSSCSCSSCC
T ss_pred             CcCccCCCcCeECCCCCcccCCHHHHHHHHH-HcCCCCCcCCCCC
Confidence            3444444555555555555555555555544 4555555555444

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.00  E-value=1.7e-10  Score=80.66  Aligned_cols=45  Identities=27%  Similarity=0.498  Sum_probs=29.4

Q ss_pred             HHhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCC
Q psy5888         276 RHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDR  321 (447)
Q Consensus       276 ~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C  321 (447)
                      +|++ +|.++++|.|.+|++.|.+...|..|+++|.++++|.|+.|
T Consensus         2 ~H~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGS-SGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCC-CCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCC-ccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3555 56666666666666666666666666666666666666655

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.00  E-value=3.6e-10  Score=86.51  Aligned_cols=55  Identities=45%  Similarity=0.913  Sum_probs=49.4

Q ss_pred             CCCCccCCC--CCCccCChHHHHHHHHHhcCCCcccCCC--CCCcccchhhHHHHhhhhc
Q psy5888         227 PKDRYACKF--CGKVFPRSANLTRHLRTHTGEQPYKCKY--CERSFSISSNLQRHVRNIH  282 (447)
Q Consensus       227 ~~k~~~C~~--Cgk~F~~~~~L~~H~r~H~~ekp~~C~~--C~k~F~s~~~L~~H~~~~H  282 (447)
                      ..++|.|.+  |++.|.....|.+|+++|+++++|.|.+  |++.|.....|.+|++ +|
T Consensus        14 ~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~-~H   72 (72)
T 2epa_A           14 RIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRR-TH   72 (72)
T ss_dssp             CCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTT-TC
T ss_pred             ccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhh-cC
Confidence            346799998  9999999999999999999999999975  9999999999999987 55

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.2e-10  Score=81.35  Aligned_cols=41  Identities=29%  Similarity=0.569  Sum_probs=20.4

Q ss_pred             hccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCC
Q psy5888         281 IHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDR  321 (447)
Q Consensus       281 ~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C  321 (447)
                      +|.++++|.|.+|++.|.+...|..|+++|+++++|.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            6 SGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            44444555555555555555555555555555555555444

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.99  E-value=8.1e-11  Score=82.29  Aligned_cols=45  Identities=38%  Similarity=0.659  Sum_probs=36.5

Q ss_pred             HHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCC
Q psy5888         248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLC  293 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C  293 (447)
                      +|+++|+++++|.|.+|++.|.....|.+|++ +|.++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQR-VHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHH-HHSSCCCSSCCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHH-HcCCCCCCCCCCC
Confidence            46677888888888888888888888888887 6888888888876

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=7.9e-11  Score=82.26  Aligned_cols=44  Identities=23%  Similarity=0.520  Sum_probs=22.4

Q ss_pred             HhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCC
Q psy5888         277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDR  321 (447)
Q Consensus       277 H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C  321 (447)
                      |++ +|.++++|.|.+|++.|.+...|..|+++|+++++|.|+.|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            3 SGS-SGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCC-CCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             ccC-CcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            444 45555555555555555555555555555555555555444

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=9e-11  Score=81.85  Aligned_cols=44  Identities=23%  Similarity=0.402  Sum_probs=23.6

Q ss_pred             HhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCC
Q psy5888         277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDR  321 (447)
Q Consensus       277 H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C  321 (447)
                      |++ +|.++++|.|.+|++.|.+...|..|+++|.++++|.|+.|
T Consensus         3 H~~-~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            3 SGS-SGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCC-SCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             Ccc-ccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            444 45555555555555555555555555555555555555544

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.99  E-value=1.2e-10  Score=81.46  Aligned_cols=44  Identities=30%  Similarity=0.513  Sum_probs=25.5

Q ss_pred             HhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCC
Q psy5888         277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDR  321 (447)
Q Consensus       277 H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C  321 (447)
                      |++ +|.++++|.|.+|++.|.+...|..|+++|+++++|.|..|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGS-SGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCC-CCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCC-CCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            444 45555555565566556555555556555555555555554

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.2e-10  Score=81.26  Aligned_cols=44  Identities=20%  Similarity=0.376  Sum_probs=23.2

Q ss_pred             HhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCC
Q psy5888         277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDR  321 (447)
Q Consensus       277 H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C  321 (447)
                      |++ +|.++++|.|.+|++.|.+...|.+|+++|+++++|.|+.|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            3 SGS-SGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCC-CSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             Ccc-cCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            444 45555555555555555555555555555555555555544

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.4e-10  Score=81.07  Aligned_cols=41  Identities=27%  Similarity=0.507  Sum_probs=19.2

Q ss_pred             hccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCC
Q psy5888         281 IHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDR  321 (447)
Q Consensus       281 ~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C  321 (447)
                      +|.++++|.|.+|++.|.+...|..|+++|.++++|.|+.|
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            6 SGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            34444444444444444444444444444444444444443

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=2.1e-10  Score=79.93  Aligned_cols=45  Identities=24%  Similarity=0.383  Sum_probs=28.6

Q ss_pred             HHhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCC
Q psy5888         276 RHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDR  321 (447)
Q Consensus       276 ~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C  321 (447)
                      +|++ +|.++++|.|.+|++.|.+...|..|+++|.++++|.|+.|
T Consensus         2 ~H~~-~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGS-SGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCC-CCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCC-CCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3555 56666666666666666666666666666666666666655

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.99  E-value=2.5e-10  Score=79.72  Aligned_cols=45  Identities=36%  Similarity=0.563  Sum_probs=42.7

Q ss_pred             HHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCC
Q psy5888         248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLC  293 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C  293 (447)
                      .|+++|+++++|.|.+|++.|.+...|.+|++ +|.++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~C   46 (46)
T 2ely_A            2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHK-LHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSTTHHHHHHH-HHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCCcccCccCcccCCHHHHHHHHH-HcCCCCCCCCCCC
Confidence            37889999999999999999999999999999 8999999999988

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.8e-10  Score=80.29  Aligned_cols=45  Identities=38%  Similarity=0.563  Sum_probs=42.8

Q ss_pred             HHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCC
Q psy5888         248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLC  293 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C  293 (447)
                      +|+++|+++++|.|.+|++.|.+...|.+|++ +|.++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHER-LHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHH-HCCSSSCCCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHH-hcCCCCCCCCCCC
Confidence            47889999999999999999999999999998 8999999999988

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.1e-10  Score=81.63  Aligned_cols=44  Identities=30%  Similarity=0.496  Sum_probs=21.9

Q ss_pred             HHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCC
Q psy5888         249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLC  293 (447)
Q Consensus       249 H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C  293 (447)
                      |+++|+++++|.|.+|++.|.+...|.+|++ +|.++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQK-IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGG-GTSCSSCSCCCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHH-HhCCCCCCCCCCC
Confidence            3444445555555555555555555555544 4555555555444

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.99  E-value=8.4e-11  Score=82.11  Aligned_cols=44  Identities=25%  Similarity=0.474  Sum_probs=22.5

Q ss_pred             HhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCC
Q psy5888         277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDR  321 (447)
Q Consensus       277 H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C  321 (447)
                      |++ +|.++++|.|.+|++.|.+...|..|+++|.++++|.|+.|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            3 SGS-SGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCS-SCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             Ccc-CCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            444 45555555555555555555555555555555555555444

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.3e-10  Score=81.06  Aligned_cols=41  Identities=27%  Similarity=0.566  Sum_probs=21.1

Q ss_pred             hccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCC
Q psy5888         281 IHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDR  321 (447)
Q Consensus       281 ~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C  321 (447)
                      +|.++++|.|.+|++.|.+...|.+|+++|+++++|.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            6 SGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45555555555555555555555555555555555555444

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=2.3e-10  Score=79.84  Aligned_cols=45  Identities=31%  Similarity=0.564  Sum_probs=28.5

Q ss_pred             HHhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCC
Q psy5888         276 RHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDR  321 (447)
Q Consensus       276 ~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C  321 (447)
                      +|++ +|.++++|.|.+|++.|.+...|..|+++|+++++|.|+.|
T Consensus         2 ~H~~-~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGS-SGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCC-CSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCC-CCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3555 56666666666666666666666666666666666666655

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=9.5e-11  Score=81.74  Aligned_cols=45  Identities=33%  Similarity=0.524  Sum_probs=36.8

Q ss_pred             HHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCC
Q psy5888         248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLC  293 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C  293 (447)
                      +|+++|+++++|.|.+|++.|.+...|.+|++ +|.++++|.|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQK-CHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHH-HHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHH-hcCCCCCCCCCCC
Confidence            46777888888888888888888888888887 7888888888877

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.8e-10  Score=80.37  Aligned_cols=45  Identities=38%  Similarity=0.615  Sum_probs=42.8

Q ss_pred             HHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCC
Q psy5888         248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLC  293 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C  293 (447)
                      +|+++|+++++|.|.+|++.|.....|.+|++ +|.++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRG-IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGG-GTSCCCCCSCCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhh-hcCCCCCCCCCCC
Confidence            47889999999999999999999999999998 8999999999988

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.4e-10  Score=80.99  Aligned_cols=41  Identities=24%  Similarity=0.545  Sum_probs=19.9

Q ss_pred             hccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCC
Q psy5888         281 IHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDR  321 (447)
Q Consensus       281 ~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C  321 (447)
                      +|.++++|.|.+|++.|.+...|.+|+++|+++++|.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            6 SGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            34444444444444444444444444444444444444444

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.9e-10  Score=80.12  Aligned_cols=45  Identities=38%  Similarity=0.571  Sum_probs=42.8

Q ss_pred             HHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCC
Q psy5888         248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLC  293 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C  293 (447)
                      +|+++|+++++|.|.+|++.|.+...|.+|++ +|.++++|.|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQR-IHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHT-TTTTSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHH-HcCCCCCCCCCCC
Confidence            47889999999999999999999999999999 7999999999988

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.98  E-value=1.8e-10  Score=80.34  Aligned_cols=45  Identities=29%  Similarity=0.467  Sum_probs=42.9

Q ss_pred             HHhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCC
Q psy5888         276 RHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDR  321 (447)
Q Consensus       276 ~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C  321 (447)
                      +|++ +|.++++|.|.+|++.|.+...|..|+++|.++++|.|+.|
T Consensus         2 ~H~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGS-SGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCC-CSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CCcC-ccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            5788 79999999999999999999999999999999999999988

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.1e-10  Score=81.43  Aligned_cols=41  Identities=29%  Similarity=0.598  Sum_probs=20.3

Q ss_pred             hccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCC
Q psy5888         281 IHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDR  321 (447)
Q Consensus       281 ~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C  321 (447)
                      +|.++++|.|.+|++.|.+...|..|+++|.++++|.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            6 SGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            34444445555555555555555555544544455554444

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.98  E-value=1.2e-10  Score=81.23  Aligned_cols=44  Identities=34%  Similarity=0.531  Sum_probs=22.3

Q ss_pred             HHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCC
Q psy5888         249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLC  293 (447)
Q Consensus       249 H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C  293 (447)
                      |+++|+++++|.|.+|++.|.+...|.+|++ +|.++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~C   46 (46)
T 2el4_A            3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQR-SHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSSCEESSHHHHHHHGG-GSSSCCCSCCTTC
T ss_pred             cccCCCCCCceECCCCCchhCCHHHHHHHHH-HhCCCCCCCCCCC
Confidence            4444555555555555555555555555554 4555555555444

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.7e-10  Score=80.52  Aligned_cols=45  Identities=36%  Similarity=0.603  Sum_probs=42.9

Q ss_pred             HHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCC
Q psy5888         248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLC  293 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C  293 (447)
                      +|+++|+++++|.|.+|++.|.....|.+|++ +|.++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQR-IHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHG-GGSSCCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHH-HhcCCCCCCCCCC
Confidence            47889999999999999999999999999999 8999999999988

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.2e-10  Score=81.27  Aligned_cols=44  Identities=25%  Similarity=0.425  Sum_probs=22.2

Q ss_pred             HhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCC
Q psy5888         277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDR  321 (447)
Q Consensus       277 H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C  321 (447)
                      |++ +|.++++|.|.+|++.|.+...|..|+++|.++++|.|+.|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            3 SGS-SGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCS-CSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CcC-CcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            444 45555555555555555555555555555555555555444

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=2.2e-10  Score=79.87  Aligned_cols=44  Identities=30%  Similarity=0.560  Sum_probs=25.3

Q ss_pred             HhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCC
Q psy5888         277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDR  321 (447)
Q Consensus       277 H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C  321 (447)
                      |++ +|.++++|.|.+|++.|.+...|..|+++|.++++|.|..|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            3 SGS-SGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSC-CCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCc-CCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            444 45555555555555555555555555555555555555554

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=1.3e-10  Score=81.09  Aligned_cols=44  Identities=34%  Similarity=0.564  Sum_probs=22.5

Q ss_pred             HHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCC
Q psy5888         249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLC  293 (447)
Q Consensus       249 H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C  293 (447)
                      |+++|+++++|.|.+|++.|.+...|.+|++ +|.++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHM-VHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGG-GGTTCCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHH-HhCCCCCCCCCCC
Confidence            3444555555555555555555555555554 4555555555544

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.5e-10  Score=80.69  Aligned_cols=45  Identities=44%  Similarity=0.701  Sum_probs=38.7

Q ss_pred             HHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCC
Q psy5888         248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLC  293 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C  293 (447)
                      +|+++|+++++|.|.+|++.|.....|.+|++ +|.++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQR-IHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHT-TTTTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHH-hcCCCCCCCCCCC
Confidence            46778888888999999999998888999988 7888888888887

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=1.1e-10  Score=80.67  Aligned_cols=41  Identities=27%  Similarity=0.540  Sum_probs=20.3

Q ss_pred             hccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCC
Q psy5888         281 IHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDR  321 (447)
Q Consensus       281 ~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C  321 (447)
                      +|.++++|.|.+|++.|.+...|..|+++|.++++|.|+.|
T Consensus         4 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            4 GSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34444455555555555555555555544554455554444

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.5e-10  Score=80.80  Aligned_cols=45  Identities=38%  Similarity=0.612  Sum_probs=37.1

Q ss_pred             HHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCC
Q psy5888         248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLC  293 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C  293 (447)
                      +|+++|+++++|.|.+|++.|.+...|.+|++ +|.++++|.|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSM-VHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHH-HTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHH-HcCCCCCCCCCCC
Confidence            36777888888888888888888888888887 7888888888877

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.5e-10  Score=80.82  Aligned_cols=44  Identities=27%  Similarity=0.459  Sum_probs=21.5

Q ss_pred             HhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCC
Q psy5888         277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDR  321 (447)
Q Consensus       277 H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C  321 (447)
                      |++ +|.++++|.|.+|++.|.+...|..|+++|.++++|.|+.|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            3 SGS-SGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             SSC-TTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             ccc-CCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            444 44444455555555555555555555544554555554443

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.97  E-value=1.8e-10  Score=80.43  Aligned_cols=45  Identities=38%  Similarity=0.578  Sum_probs=42.8

Q ss_pred             HHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCC
Q psy5888         248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLC  293 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C  293 (447)
                      +|+++|+++++|.|.+|++.|.+...|.+|++ +|.++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQK-IHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHT-GGGCCCCCSSSCC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHH-hcCCCCCCCCCCC
Confidence            47889999999999999999999999999999 8999999999988

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.8e-10  Score=80.25  Aligned_cols=44  Identities=27%  Similarity=0.478  Sum_probs=25.7

Q ss_pred             HhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCC
Q psy5888         277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDR  321 (447)
Q Consensus       277 H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C  321 (447)
                      |++ +|.++++|.|.+|++.|.+...|..|+++|.++++|.|+.|
T Consensus         3 H~~-~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            3 SGS-SGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CSS-CCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCC-CCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            444 45555556666666666666666666655655556655554

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=7.9e-11  Score=82.26  Aligned_cols=44  Identities=25%  Similarity=0.530  Sum_probs=22.9

Q ss_pred             HhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCC
Q psy5888         277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDR  321 (447)
Q Consensus       277 H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C  321 (447)
                      |++ +|.++++|.|.+|++.|.+...|..|+++|.++++|.|+.|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            3 SGS-SGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCC-SCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCC-CCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            444 45555555555555555555555555555555555555544

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.8e-10  Score=80.26  Aligned_cols=45  Identities=40%  Similarity=0.569  Sum_probs=42.9

Q ss_pred             HHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCC
Q psy5888         248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLC  293 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C  293 (447)
                      +|+++|+++++|.|.+|++.|.+...|.+|++ +|.++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~C   46 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQR-IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHH-HHSCCCTTSSSCC
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHH-HhCCCCCCCCCCC
Confidence            47889999999999999999999999999999 8999999999988

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=2.7e-10  Score=79.48  Aligned_cols=44  Identities=36%  Similarity=0.573  Sum_probs=42.2

Q ss_pred             HHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCC
Q psy5888         249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLC  293 (447)
Q Consensus       249 H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C  293 (447)
                      |+++|.++++|.|.+|++.|.+...|.+|++ +|.++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRR-IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHT-TTTTCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHH-HhCCCCCCCCCCC
Confidence            7789999999999999999999999999999 8999999999988

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.7e-10  Score=80.48  Aligned_cols=44  Identities=41%  Similarity=0.761  Sum_probs=21.0

Q ss_pred             HHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCC
Q psy5888         249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLC  293 (447)
Q Consensus       249 H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C  293 (447)
                      |+++|+++++|.|.+|++.|.....|.+|++ +|.++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~C   46 (46)
T 2eme_A            3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQR-IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCCCSEECSSSCCEESSHHHHHHHHG-GGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCeECCCCChhhCCHHHHHHHHH-hcCCCCCCCCCCC
Confidence            3444444444444444444444444444444 4444444444444

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.2e-10  Score=81.14  Aligned_cols=45  Identities=38%  Similarity=0.606  Sum_probs=38.0

Q ss_pred             HHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCC
Q psy5888         248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLC  293 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C  293 (447)
                      +|+++|+++++|.|.+|++.|.+...|.+|++ +|.++++|.|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~-~H~~~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQR-IHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHG-GGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHH-HcCCCCCCCCCCC
Confidence            36778888888888888888888888888887 7888888888877

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=9.8e-11  Score=81.85  Aligned_cols=44  Identities=20%  Similarity=0.398  Sum_probs=21.5

Q ss_pred             HhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCC
Q psy5888         277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDR  321 (447)
Q Consensus       277 H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C  321 (447)
                      |++ +|.++++|.|.+|++.|.+...|..|+++|.++++|.|+.|
T Consensus         3 H~~-~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            3 SGS-SGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCC-CCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CcC-CCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            444 44444445555555555555555555544544455554444

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=1e-10  Score=81.62  Aligned_cols=41  Identities=20%  Similarity=0.256  Sum_probs=19.5

Q ss_pred             hccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCC
Q psy5888         281 IHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDR  321 (447)
Q Consensus       281 ~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C  321 (447)
                      +|.++++|.|.+|++.|.+...|..|+++|+++++|.|+.|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            6 SGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             cCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34444444444444444444444444444444444444443

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.4e-10  Score=81.04  Aligned_cols=44  Identities=25%  Similarity=0.492  Sum_probs=25.6

Q ss_pred             HhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCC
Q psy5888         277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDR  321 (447)
Q Consensus       277 H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C  321 (447)
                      |++ +|.++++|.|.+|++.|.+...|..|+++|+++++|.|+.|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            3 SGS-SGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCC-CCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCC-CCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            444 45555555665566666655556666555555555555554

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.3e-10  Score=81.04  Aligned_cols=41  Identities=29%  Similarity=0.575  Sum_probs=18.8

Q ss_pred             hccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCC
Q psy5888         281 IHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDR  321 (447)
Q Consensus       281 ~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C  321 (447)
                      +|.++++|.|.+|++.|.+...|..|+++|.++++|.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            6 SGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34444444444444444444444444444444444444443

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.6e-10  Score=80.71  Aligned_cols=41  Identities=24%  Similarity=0.599  Sum_probs=19.9

Q ss_pred             hccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCC
Q psy5888         281 IHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDR  321 (447)
Q Consensus       281 ~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C  321 (447)
                      +|.++++|.|.+|++.|.+...|..|+++|+++++|.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            6 SGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34444444444444444444444444444444444444443

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.97  E-value=1.5e-10  Score=80.64  Aligned_cols=44  Identities=41%  Similarity=0.657  Sum_probs=21.6

Q ss_pred             HHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCC
Q psy5888         249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLC  293 (447)
Q Consensus       249 H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C  293 (447)
                      |+++|+++++|.|.+|++.|.+...|.+|++ +|.++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~C   46 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQR-VHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHGG-GGTSCCCCSTTCC
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHHH-HhCCCCCCCCCCC
Confidence            3444444555555555555555555555544 4544455555444

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.9e-10  Score=80.28  Aligned_cols=44  Identities=20%  Similarity=0.456  Sum_probs=25.9

Q ss_pred             HhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCC
Q psy5888         277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDR  321 (447)
Q Consensus       277 H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C  321 (447)
                      |++ +|.++++|.|.+|++.|.+...|..|+++|.++++|.|+.|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            3 SGS-SGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCC-CCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCC-CCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            444 45555566666666666666666666666666666665554

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.2e-10  Score=79.98  Aligned_cols=45  Identities=40%  Similarity=0.676  Sum_probs=42.9

Q ss_pred             HHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCC
Q psy5888         248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLC  293 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C  293 (447)
                      +|+++|+++++|.|.+|++.|.+...|.+|++ +|.++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQK-IHTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHH-HTSCCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHH-HcCCCCCCCCCCC
Confidence            57889999999999999999999999999998 8999999999987

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.3e-10  Score=81.06  Aligned_cols=44  Identities=27%  Similarity=0.533  Sum_probs=22.5

Q ss_pred             HhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCC
Q psy5888         277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDR  321 (447)
Q Consensus       277 H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C  321 (447)
                      |++ +|.++++|.|.+|++.|.+...|..|+++|.++++|.|+.|
T Consensus         3 H~~-~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            3 SGS-SGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCC-CSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             Ccc-cCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            444 45555555555555555555555555555555555555444

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=3e-10  Score=79.30  Aligned_cols=44  Identities=30%  Similarity=0.459  Sum_probs=42.2

Q ss_pred             HHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCC
Q psy5888         249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLC  293 (447)
Q Consensus       249 H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C  293 (447)
                      |+++|+++++|.|.+|++.|.+...|.+|++ +|.++++|.|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQR-VHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGG-GGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHH-hcCCCCCCCCCCC
Confidence            6789999999999999999999999999999 8999999999988

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=3.2e-10  Score=79.22  Aligned_cols=44  Identities=36%  Similarity=0.565  Sum_probs=42.2

Q ss_pred             HHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCC
Q psy5888         249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLC  293 (447)
Q Consensus       249 H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C  293 (447)
                      |+++|+++++|.|.+|++.|.+...|.+|++ +|.++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMR-THSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHT-TTCCSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHH-HhCCCCCCCCCCC
Confidence            7789999999999999999999999999999 8999999999988

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.8e-10  Score=80.43  Aligned_cols=45  Identities=38%  Similarity=0.617  Sum_probs=42.8

Q ss_pred             HHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCC
Q psy5888         248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLC  293 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C  293 (447)
                      +|+++|+++++|.|.+|++.|.+...|.+|++ +|.++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQK-IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHH-HHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHH-hcCCCCCCCCCCC
Confidence            47889999999999999999999999999999 8999999999988

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.3e-10  Score=81.20  Aligned_cols=44  Identities=20%  Similarity=0.372  Sum_probs=23.3

Q ss_pred             HhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCC
Q psy5888         277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDR  321 (447)
Q Consensus       277 H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C  321 (447)
                      |++ +|.++++|.|.+|++.|.+...|..|+++|.++++|.|+.|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            3 SGS-SGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCS-CSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             ccc-ccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            444 45555555555555555555555555555555555555544

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.9e-10  Score=80.30  Aligned_cols=45  Identities=36%  Similarity=0.555  Sum_probs=42.9

Q ss_pred             HHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCC
Q psy5888         248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLC  293 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C  293 (447)
                      +|+++|+++++|.|.+|++.|.....|.+|++ +|.++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQV-IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHH-HHHCCSCCSCCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHH-HcCCCCCCCCCCC
Confidence            47889999999999999999999999999999 8999999999988

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.4e-10  Score=80.99  Aligned_cols=45  Identities=36%  Similarity=0.545  Sum_probs=36.5

Q ss_pred             HHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCC
Q psy5888         248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLC  293 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C  293 (447)
                      +|+++|+++++|.|.+|++.|.+...|.+|++ +|.++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQR-THAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHH-HHTTSCCSCSSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHH-HcCCCCCCCCCCC
Confidence            36677888888888888888888888888887 6888888888876

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=2.4e-10  Score=78.92  Aligned_cols=44  Identities=34%  Similarity=0.565  Sum_probs=41.9

Q ss_pred             HHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCC
Q psy5888         249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLC  293 (447)
Q Consensus       249 H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C  293 (447)
                      |+++|+++++|.|.+|++.|.+...|.+|++ +|.++++|.|.+|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQ-THAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHH-HHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHH-HhCCCCCCCCCCC
Confidence            6788999999999999999999999999999 7999999999988

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.1e-10  Score=80.04  Aligned_cols=45  Identities=38%  Similarity=0.632  Sum_probs=42.8

Q ss_pred             HHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCC
Q psy5888         248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLC  293 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C  293 (447)
                      +|+++|+++++|.|.+|++.|.+...|.+|++ +|.++++|.|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWR-IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHH-HHSSSSCSSCCCC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHH-HHCCCCCCCCCCC
Confidence            47889999999999999999999999999999 8999999999988

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.5e-10  Score=80.79  Aligned_cols=44  Identities=27%  Similarity=0.511  Sum_probs=22.0

Q ss_pred             HhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCC
Q psy5888         277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDR  321 (447)
Q Consensus       277 H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C  321 (447)
                      |++ +|.++++|.|.+|++.|.+...|..|+++|.++++|.|+.|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            3 SGS-SGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCC-CSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             Ccc-ccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            444 44455555555555555555555555555555555555444

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2e-10  Score=80.17  Aligned_cols=45  Identities=38%  Similarity=0.623  Sum_probs=42.9

Q ss_pred             HHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCC
Q psy5888         248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLC  293 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C  293 (447)
                      +|+++|+++++|.|.+|++.|.....|.+|++ +|.++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQ-IHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHH-TTSSCCSCCSCCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHH-HhCCCCCCCCCCC
Confidence            47889999999999999999999999999999 8999999999987

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.95  E-value=1.8e-10  Score=80.27  Aligned_cols=45  Identities=20%  Similarity=0.361  Sum_probs=43.0

Q ss_pred             HHhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCC
Q psy5888         276 RHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDR  321 (447)
Q Consensus       276 ~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C  321 (447)
                      +|++ +|.++++|.|.+|++.|.+...|..|+++|+++++|.|+.|
T Consensus         2 ~H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGS-SGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCC-CSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             cccc-CCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            5788 79999999999999999999999999999999999999988

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=1.3e-10  Score=81.13  Aligned_cols=40  Identities=30%  Similarity=0.600  Sum_probs=19.1

Q ss_pred             hccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCC
Q psy5888         281 IHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDD  320 (447)
Q Consensus       281 ~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~  320 (447)
                      +|.++++|.|.+|++.|.+...|..|+++|.++++|.|+.
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ep3_A            6 SGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             SSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTC
T ss_pred             CCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            3444444444444444444444444444444444444443

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=1.4e-10  Score=80.90  Aligned_cols=44  Identities=34%  Similarity=0.604  Sum_probs=23.8

Q ss_pred             HHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCC
Q psy5888         249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLC  293 (447)
Q Consensus       249 H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C  293 (447)
                      |+++|+++++|.|.+|++.|.....|.+|++ +|.++++|.|.+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~C   46 (46)
T 2ytg_A            3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQR-VHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECTTTCCEESSSHHHHTTGG-GGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHH-HcCCCCCCCCCCC
Confidence            4445555555555555555555555555555 4555555555554

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.5e-10  Score=79.59  Aligned_cols=44  Identities=25%  Similarity=0.347  Sum_probs=25.5

Q ss_pred             HhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCC
Q psy5888         277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDR  321 (447)
Q Consensus       277 H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C  321 (447)
                      |++ +|.++++|.|.+|++.|.+...|..|+++|.++++|.|+.|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            3 SGS-SGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCC-CCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             Ccc-cCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            444 45555555565566556555555556555555555555554

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=2.1e-10  Score=80.10  Aligned_cols=45  Identities=29%  Similarity=0.494  Sum_probs=42.9

Q ss_pred             HHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCC
Q psy5888         248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLC  293 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C  293 (447)
                      +|+++|+++++|.|.+|++.|.+...|.+|++ +|.++++|.|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQR-IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHT-TTSCSCCSSCCCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHH-HhCCCCCCCCCCC
Confidence            47889999999999999999999999999998 8999999999988

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.6e-10  Score=79.58  Aligned_cols=45  Identities=42%  Similarity=0.648  Sum_probs=42.8

Q ss_pred             HHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCC
Q psy5888         248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLC  293 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C  293 (447)
                      .|+++|+++++|.|.+|++.|.+...|.+|++ +|.++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~C   46 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQR-IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHT-TTCCCCCCSCCCC
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHh-hcCCCCCCCCCCC
Confidence            47889999999999999999999999999999 8999999999988

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=1.7e-10  Score=80.42  Aligned_cols=45  Identities=31%  Similarity=0.436  Sum_probs=38.3

Q ss_pred             HHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCC
Q psy5888         248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLC  293 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C  293 (447)
                      +|+++|+++++|.|.+|++.|.+...|.+|++ +|.++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQR-THVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHH-HCCSCCCSCCCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHH-HhCCCCCCCCCCC
Confidence            46778888888888888888888888888888 7888888888877

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=1.9e-10  Score=80.32  Aligned_cols=41  Identities=27%  Similarity=0.496  Sum_probs=18.7

Q ss_pred             hccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCC
Q psy5888         281 IHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDR  321 (447)
Q Consensus       281 ~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C  321 (447)
                      +|.++++|.|.+|++.|.+...|..|+++|+++++|.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            6 SGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            34444444444444444444444444444444444444443

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.1e-10  Score=80.08  Aligned_cols=45  Identities=40%  Similarity=0.610  Sum_probs=42.7

Q ss_pred             HHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCC
Q psy5888         248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLC  293 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C  293 (447)
                      +|+++|+++++|.|.+|++.|.+...|.+|++ +|.++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~~c   46 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQL-IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHT-TTCCCCCSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHH-HcCCCCCCCCCCC
Confidence            47789999999999999999999999999998 8999999999988

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=3.5e-10  Score=79.08  Aligned_cols=44  Identities=25%  Similarity=0.512  Sum_probs=28.1

Q ss_pred             HhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCC
Q psy5888         277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDR  321 (447)
Q Consensus       277 H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C  321 (447)
                      |++ +|.++++|.|.+|++.|.+...|.+|+++|.++++|.|+.|
T Consensus         3 h~~-~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGS-SGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCC-CCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCc-CCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            444 56666666666666666666666666666666666666655

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=1.3e-10  Score=81.08  Aligned_cols=44  Identities=30%  Similarity=0.533  Sum_probs=23.0

Q ss_pred             HhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCC
Q psy5888         277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDR  321 (447)
Q Consensus       277 H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C  321 (447)
                      |++ +|.++++|.|.+|++.|.+...|..|+++|.++++|.|+.|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            3 SGS-SGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCC-CCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             cCc-CCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            444 45555555555555555555555555555555555555544

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.95  E-value=5e-10  Score=81.31  Aligned_cols=41  Identities=39%  Similarity=0.759  Sum_probs=21.5

Q ss_pred             CCccCCCCCCccCChHHHHHHHH-HhcCCCcccCCCCCCccc
Q psy5888         229 DRYACKFCGKVFPRSANLTRHLR-THTGEQPYKCKYCERSFS  269 (447)
Q Consensus       229 k~~~C~~Cgk~F~~~~~L~~H~r-~H~~ekp~~C~~C~k~F~  269 (447)
                      ++|.|.+|++.|.....|.+|++ +|.++++|.|.+|++.|.
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~   52 (54)
T 2eps_A           11 KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS   52 (54)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCC
Confidence            44555555555555555555554 455555555555555554

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.3e-10  Score=79.91  Aligned_cols=45  Identities=22%  Similarity=0.408  Sum_probs=42.7

Q ss_pred             HHhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCC
Q psy5888         276 RHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDR  321 (447)
Q Consensus       276 ~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C  321 (447)
                      .|++ +|.++++|.|.+|++.|.+...|..|+++|.++++|.|+.|
T Consensus         2 ~H~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            2 SSGS-SGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCS-SSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             cccc-ccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4777 79999999999999999999999999999999999999987

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=1.6e-10  Score=80.79  Aligned_cols=44  Identities=32%  Similarity=0.579  Sum_probs=33.0

Q ss_pred             HHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCC
Q psy5888         249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLC  293 (447)
Q Consensus       249 H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C  293 (447)
                      |+++|+++++|.|.+|++.|.+...|.+|++ +|.++++|.|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQR-LHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHH-HHHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHH-HcCCCCCCCCCCC
Confidence            5566777777777777777777777777777 6777777777776

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=1.9e-10  Score=80.26  Aligned_cols=45  Identities=38%  Similarity=0.636  Sum_probs=42.8

Q ss_pred             HHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCC
Q psy5888         248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLC  293 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C  293 (447)
                      +|+++|+++++|.|.+|++.|.....|.+|++ +|.++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRR-VHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTH-HHHSCCCSCSCCC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHH-hcCCCCCCCCCCC
Confidence            47889999999999999999999999999999 8999999999988

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=1.5e-10  Score=80.94  Aligned_cols=45  Identities=29%  Similarity=0.500  Sum_probs=37.8

Q ss_pred             HHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCC
Q psy5888         248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLC  293 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C  293 (447)
                      +|+++|+++++|.|.+|++.|.+...|..|++ +|.++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLK-RHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHH-HHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHH-HHcCCCCCCCCCC
Confidence            46778888888888888888888888888887 6888888888877

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.5e-10  Score=79.61  Aligned_cols=45  Identities=31%  Similarity=0.573  Sum_probs=42.8

Q ss_pred             HHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCC
Q psy5888         248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLC  293 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C  293 (447)
                      +|+++|+++++|.|.+|++.|.+...|.+|++ +|.++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRR-IHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHH-HHTCCCSSCSSCC
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHH-HcCCCCCCCCCCC
Confidence            47889999999999999999999999999998 8999999999988

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.8e-10  Score=79.32  Aligned_cols=45  Identities=27%  Similarity=0.526  Sum_probs=43.0

Q ss_pred             HHhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCC
Q psy5888         276 RHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDR  321 (447)
Q Consensus       276 ~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C  321 (447)
                      +|++ +|.++++|.|.+|++.|.+...|..|+++|.++++|.|..|
T Consensus         2 ~H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGS-SGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCC-TTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCC-CCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            5787 89999999999999999999999999999999999999988

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=2.3e-10  Score=79.75  Aligned_cols=45  Identities=27%  Similarity=0.355  Sum_probs=42.8

Q ss_pred             HHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCC
Q psy5888         248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLC  293 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C  293 (447)
                      +|+++|+++++|.|.+|++.|.....|.+|++ +|.++++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQR-VHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHT-TTCCSCSSCCSCC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHH-HhCCCCCCCCCCC
Confidence            47889999999999999999999999999998 8999999999988

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.9e-10  Score=80.25  Aligned_cols=44  Identities=34%  Similarity=0.640  Sum_probs=21.5

Q ss_pred             HHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCC
Q psy5888         249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLC  293 (447)
Q Consensus       249 H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C  293 (447)
                      |+++|+++++|.|.+|++.|.+...|.+|++ +|.++++|.|.+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~C   46 (46)
T 2en1_A            3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQR-VHTGEKPSGPSSG   46 (46)
T ss_dssp             STTCCCCCCSEEETTTTEEESSHHHHHHHGG-GGSCCCCSCCCCC
T ss_pred             cccCCCCCCCeeCCCCCcccCCHHHHHHHHH-HcCCCCCCCCCCC
Confidence            3444444455555555555555555555544 4444444554444

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.5e-10  Score=80.84  Aligned_cols=41  Identities=32%  Similarity=0.588  Sum_probs=18.8

Q ss_pred             hccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCC
Q psy5888         281 IHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDR  321 (447)
Q Consensus       281 ~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C  321 (447)
                      +|.++++|.|.+|++.|.+...|..|+++|.++++|.|..|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            6 SGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            34444444444444444444444444444444444444443

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.94  E-value=2.3e-10  Score=79.90  Aligned_cols=41  Identities=22%  Similarity=0.467  Sum_probs=19.2

Q ss_pred             hccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCC
Q psy5888         281 IHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDR  321 (447)
Q Consensus       281 ~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C  321 (447)
                      +|.++++|.|.+|++.|.+...|..|+++|.++++|.|+.|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            6 SGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34444444444444444444444444444444444444443

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.94  E-value=3.9e-10  Score=86.32  Aligned_cols=57  Identities=35%  Similarity=0.743  Sum_probs=43.8

Q ss_pred             hcCCCcccCCC--CCCcccchhhHHHHhhhhccCCCCCCCCC--CCcccCCchhHHHHHhhh
Q psy5888         253 HTGEQPYKCKY--CERSFSISSNLQRHVRNIHNKEKPFKCPL--CDRCFGQQTNLDRHLKKH  310 (447)
Q Consensus       253 H~~ekp~~C~~--C~k~F~s~~~L~~H~~~~H~~~kp~~C~~--C~k~F~~~~~L~~Hlr~H  310 (447)
                      +...++|.|.+  |++.|.....|.+|++ .|.++++|.|.+  |++.|.....|..|+++|
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTR-THTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHH-HHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHH-hcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            34567788877  8888888888888887 688888888864  888888888888887765

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.93  E-value=2.5e-10  Score=79.51  Aligned_cols=45  Identities=22%  Similarity=0.420  Sum_probs=42.9

Q ss_pred             HHhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCC
Q psy5888         276 RHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDR  321 (447)
Q Consensus       276 ~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C  321 (447)
                      .|++ +|.++++|.|.+|++.|.+...|..|+++|.++++|.|..|
T Consensus         2 ~H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            2 SSGS-SGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CSCC-SCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCC-CCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            4777 79999999999999999999999999999999999999988

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=2.9e-10  Score=79.31  Aligned_cols=45  Identities=24%  Similarity=0.382  Sum_probs=42.6

Q ss_pred             HHhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCC
Q psy5888         276 RHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDR  321 (447)
Q Consensus       276 ~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C  321 (447)
                      .|++ +|.++++|.|.+|++.|.+...|..|+++|+++++|.|+.|
T Consensus         2 ~H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            2 SSGS-SGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCC-SSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCC-CCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3777 79999999999999999999999999999999999999988

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=2.1e-10  Score=80.06  Aligned_cols=41  Identities=22%  Similarity=0.251  Sum_probs=20.7

Q ss_pred             hccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCC
Q psy5888         281 IHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDR  321 (447)
Q Consensus       281 ~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C  321 (447)
                      +|.++++|.|.+|++.|.+...|..|+++|.++++|.|..|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            6 SGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             ccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44455555555555555555555555555555555555444

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.93  E-value=3.3e-10  Score=79.12  Aligned_cols=45  Identities=38%  Similarity=0.575  Sum_probs=42.5

Q ss_pred             HHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCC
Q psy5888         248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLC  293 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C  293 (447)
                      .|+++|+++++|.|.+|++.|.+...|.+|++ +|.++++|.|.+|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~C   46 (46)
T 2el6_A            2 SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQR-MHTREKPSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCSEECSSSSCEESSHHHHHHHHG-GGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHH-HcCCCCCCCCCCC
Confidence            36788999999999999999999999999999 8999999999988

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=2.9e-10  Score=79.29  Aligned_cols=45  Identities=38%  Similarity=0.610  Sum_probs=42.6

Q ss_pred             HHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCC
Q psy5888         248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLC  293 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C  293 (447)
                      +|+++|+++++|.|.+|++.|.+...|.+|++ +|.++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~~   46 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQK-IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHT-TTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHH-HcCCCCCCCCCCC
Confidence            47889999999999999999999999999999 8999999999976

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=3.3e-10  Score=79.21  Aligned_cols=44  Identities=27%  Similarity=0.471  Sum_probs=27.7

Q ss_pred             HhhhhccCCCCCCCCCCCcccCCchhHHHHHh-hhcCCCCcccCCC
Q psy5888         277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLK-KHEADGPTILDDR  321 (447)
Q Consensus       277 H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr-~H~~ekp~~C~~C  321 (447)
                      |++ +|.++++|.|.+|++.|.+...|..|++ +|.++++|.|+.|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            3 SGS-SGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCC-CCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             ccc-ccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            455 5666666666666666666666666666 6666666666655

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=3.8e-10  Score=78.68  Aligned_cols=45  Identities=31%  Similarity=0.518  Sum_probs=42.6

Q ss_pred             HHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCC
Q psy5888         248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLC  293 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C  293 (447)
                      .|+++|+++++|.|.+|++.|.+...|.+|++ +|.++++|.|.+|
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~C   46 (46)
T 2enc_A            2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQR-SHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSEECSSSCCEESSHHHHHHHHH-HSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCCcCCChHHHHHHHH-HhCCCCCCCCCCC
Confidence            37789999999999999999999999999999 8999999999988

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=2.1e-10  Score=80.07  Aligned_cols=45  Identities=27%  Similarity=0.523  Sum_probs=43.0

Q ss_pred             HHhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCC
Q psy5888         276 RHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDR  321 (447)
Q Consensus       276 ~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C  321 (447)
                      +|++ +|.++++|.|.+|++.|.+...|..|+++|.++++|.|+.|
T Consensus         2 ~H~~-~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGS-SGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCC-CCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCC-CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            5788 79999999999999999999999999999999999999988

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=2.8e-10  Score=79.38  Aligned_cols=45  Identities=29%  Similarity=0.512  Sum_probs=43.0

Q ss_pred             HHhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCC
Q psy5888         276 RHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDR  321 (447)
Q Consensus       276 ~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C  321 (447)
                      +|++ +|.++++|.|.+|++.|.+...|..|+++|.++++|.|+.|
T Consensus         2 ~H~~-~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGS-SGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTT-CCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             Cccc-CCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            5888 89999999999999999999999999999999999999988

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=2.8e-10  Score=79.37  Aligned_cols=44  Identities=25%  Similarity=0.490  Sum_probs=25.5

Q ss_pred             HhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCC
Q psy5888         277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDR  321 (447)
Q Consensus       277 H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C  321 (447)
                      |++ +|.++++|.|.+|++.|.+...|..|+++|.++++|.|+.|
T Consensus         3 h~~-~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            3 SGS-SGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CSC-CCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCC-ccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            444 45555555555565555555555556555555555555554

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=1.8e-10  Score=80.33  Aligned_cols=45  Identities=36%  Similarity=0.558  Sum_probs=36.2

Q ss_pred             HHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCC
Q psy5888         248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLC  293 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C  293 (447)
                      +|+++|+++++|.|.+|++.|.+...|..|++ +|.++++|.|.+|
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQR-THTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHH-HHSSCCCSSSCCC
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHH-HcCCCCCCCCCCC
Confidence            36677888888888888888888888888887 6888888888876

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=2.2e-10  Score=80.03  Aligned_cols=41  Identities=24%  Similarity=0.470  Sum_probs=20.9

Q ss_pred             hccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCC
Q psy5888         281 IHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDR  321 (447)
Q Consensus       281 ~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C  321 (447)
                      +|.++++|.|.+|++.|.+...|..|+++|.++++|.|+.|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            6 SGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            44455555555555555555555555555555555555444

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=4.4e-10  Score=78.49  Aligned_cols=44  Identities=30%  Similarity=0.485  Sum_probs=42.1

Q ss_pred             HHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCC
Q psy5888         249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLC  293 (447)
Q Consensus       249 H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C  293 (447)
                      |+++|.++++|.|.+|++.|.+...|.+|++ +|.++++|.|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQR-VHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHH-HHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHH-HHcCCCCCCCCCC
Confidence            6788999999999999999999999999999 8999999999988

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.91  E-value=4.6e-10  Score=78.29  Aligned_cols=45  Identities=18%  Similarity=0.189  Sum_probs=42.6

Q ss_pred             HHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCC
Q psy5888         248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLC  293 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C  293 (447)
                      .|+++|+++++|.|.+|++.|.....|.+|++ +|.++++|.|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~C   46 (46)
T 2yso_A            2 SSGSSGSREKSHQCRECGEIFFQYVSLIEHQV-LHMGQKNSGPSSG   46 (46)
T ss_dssp             CCSCCSSCCCCEECTTTCCEESSHHHHHHHHH-HHSCCSCCCTTCC
T ss_pred             CcccccCCCCCEEccccChhhCCHHHHHHHHH-HhCCCCCCCCCCC
Confidence            37789999999999999999999999999999 8999999999988

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.91  E-value=1.1e-09  Score=79.38  Aligned_cols=48  Identities=27%  Similarity=0.645  Sum_probs=44.4

Q ss_pred             HhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCCCcccCC
Q psy5888         252 THTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQ  299 (447)
Q Consensus       252 ~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C~k~F~~  299 (447)
                      .|.++++|.|.+|++.|.....|.+|++.+|.++++|.|.+|++.|.+
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            467899999999999999999999998657999999999999999976

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=6.3e-10  Score=77.74  Aligned_cols=46  Identities=33%  Similarity=0.531  Sum_probs=42.8

Q ss_pred             HHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCC
Q psy5888         248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLC  293 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C  293 (447)
                      .|+++|.++++|.|.+|++.|.....|.+|++.+|.++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             ccccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            4788999999999999999999999999999746999999999988

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=3.3e-10  Score=79.05  Aligned_cols=44  Identities=32%  Similarity=0.606  Sum_probs=42.2

Q ss_pred             HHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCC
Q psy5888         249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLC  293 (447)
Q Consensus       249 H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C  293 (447)
                      |+++|+++++|.|.+|++.|.+...|.+|++ +|.++++|.|.+|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQK-VHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHT-TSCSCCSSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHH-hhCCCCCCCCCCC
Confidence            7789999999999999999999999999999 8999999999988

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.90  E-value=4.1e-11  Score=91.43  Aligned_cols=59  Identities=19%  Similarity=0.341  Sum_probs=54.8

Q ss_pred             CCCCccCCCCCCccCChHHHHHHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCC
Q psy5888         227 PKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLC  293 (447)
Q Consensus       227 ~~k~~~C~~Cgk~F~~~~~L~~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C  293 (447)
                      .+++|.|.+|++.|.....|..       +++|.|.+|++.|.....|..|++ +|.++++|.|.+|
T Consensus        15 ~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~-~H~~~~~~~C~~C   73 (73)
T 2ctu_A           15 GDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEG-NESGKKTSGPSSG   73 (73)
T ss_dssp             CCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSS-CCCCCCCSSCCCC
T ss_pred             CCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHH-hhcCCCCCCCCCC
Confidence            4578999999999999988876       789999999999999999999999 8999999999988

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=3.2e-10  Score=79.19  Aligned_cols=40  Identities=35%  Similarity=0.663  Sum_probs=20.4

Q ss_pred             hccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCC
Q psy5888         281 IHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDD  320 (447)
Q Consensus       281 ~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~  320 (447)
                      +|.++++|.|.+|++.|.+...|..|+++|.++++|.|+.
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em2_A            6 SGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSS   45 (46)
T ss_dssp             SCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSC
T ss_pred             CCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4455555555555555555555555555555555555543

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=6.6e-10  Score=77.54  Aligned_cols=45  Identities=36%  Similarity=0.631  Sum_probs=42.2

Q ss_pred             HHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCC
Q psy5888         248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLC  293 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C  293 (447)
                      .|+++|+++++|.|.+|++.|.....|.+|++ +|.++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~~   46 (46)
T 2em2_A            2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLR-IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSEECSSSCCEESSHHHHHHHHH-HHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCCEECCcCCchhCCHHHHHHHHH-HhCCCCCCCCCCC
Confidence            37789999999999999999999999999999 8999999999876

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.86  E-value=8.2e-11  Score=88.29  Aligned_cols=49  Identities=16%  Similarity=0.239  Sum_probs=23.6

Q ss_pred             HHhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCCCCCCCCh
Q psy5888         276 RHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDRNGGIPSP  328 (447)
Q Consensus       276 ~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C~k~f~s~  328 (447)
                      .|++ +|.++++|.|.+|++.|.....|.   ++|.++++|.|..|++.|...
T Consensus         4 ~h~~-~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~   52 (62)
T 1vd4_A            4 TDER-DSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEED   52 (62)
T ss_dssp             CCSS-SCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEEC
T ss_pred             hHHH-HcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccC
Confidence            3444 455555555555555554444443   445555555555555555433

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1.4e-09  Score=75.63  Aligned_cols=42  Identities=24%  Similarity=0.500  Sum_probs=25.4

Q ss_pred             HhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccC
Q psy5888         277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILD  319 (447)
Q Consensus       277 H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~  319 (447)
                      |++ +|.++++|.|.+|++.|.+...|..|+++|+++++|.|+
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep1_A            3 SGS-SGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCC-CCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred             ccc-CCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            455 566666666666666666666666666666666666654

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=7.2e-10  Score=77.15  Aligned_cols=44  Identities=39%  Similarity=0.618  Sum_probs=37.0

Q ss_pred             HHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCC
Q psy5888         248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPL  292 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~  292 (447)
                      +|+++|+++++|.|.+|++.|.+...|.+|++ +|.++++|.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQR-IHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHG-GGSSSCCCSSSC
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHH-HhCCCCCCCCCC
Confidence            46778888888888888888888888888888 788888888864

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1.6e-09  Score=73.70  Aligned_cols=38  Identities=26%  Similarity=0.489  Sum_probs=23.4

Q ss_pred             hccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCccc
Q psy5888         281 IHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTIL  318 (447)
Q Consensus       281 ~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C  318 (447)
                      +|.++++|.|.+|++.|.+...|..|+++|.++++|.|
T Consensus         4 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            4 GSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             SSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             CcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            45666666666666666666666666666666666655

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1.4e-09  Score=75.77  Aligned_cols=42  Identities=26%  Similarity=0.546  Sum_probs=24.7

Q ss_pred             HhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccC
Q psy5888         277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILD  319 (447)
Q Consensus       277 H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~  319 (447)
                      |++ +|.++++|.|.+|++.|.+...|..|+++|.++++|.|+
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq2_A            3 SGS-SGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCC-SSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred             ccc-ccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            444 455556666666666666666666666666666665554

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=9.3e-10  Score=76.69  Aligned_cols=42  Identities=31%  Similarity=0.529  Sum_probs=21.5

Q ss_pred             HhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccC
Q psy5888         277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILD  319 (447)
Q Consensus       277 H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~  319 (447)
                      |++ +|.++++|.|.+|++.|.+...|..|+++|.++++|.|+
T Consensus         3 H~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enf_A            3 SGS-SGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCC-CCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCS
T ss_pred             CCc-CCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCC
Confidence            444 455555555555555555555555555555555555543

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.83  E-value=8.1e-10  Score=75.36  Aligned_cols=38  Identities=21%  Similarity=0.525  Sum_probs=18.7

Q ss_pred             hccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCccc
Q psy5888         281 IHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTIL  318 (447)
Q Consensus       281 ~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C  318 (447)
                      +|.++++|.|.+|++.|.+...|..|+++|.++++|.|
T Consensus         4 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2el5_A            4 GSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS   41 (42)
T ss_dssp             SSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCC
T ss_pred             CCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            34444445555555555544445555444444444444

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=8.3e-10  Score=77.04  Aligned_cols=42  Identities=29%  Similarity=0.544  Sum_probs=21.4

Q ss_pred             HhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccC
Q psy5888         277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILD  319 (447)
Q Consensus       277 H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~  319 (447)
                      |++ +|.++++|.|.+|++.|.+...|..|+++|.++++|.|+
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            3 SGS-SGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCS-CCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             ccc-CCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            444 455555555555555555555555555555555555543

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.83  E-value=1.7e-09  Score=75.04  Aligned_cols=42  Identities=21%  Similarity=0.499  Sum_probs=26.7

Q ss_pred             hccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCCC
Q psy5888         281 IHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDRN  322 (447)
Q Consensus       281 ~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C~  322 (447)
                      .|.++++|.|.+|++.|.+...|..|+++|+++++|.|+.|+
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            455666666666666666666666666666666666666664

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=9.2e-10  Score=76.71  Aligned_cols=42  Identities=31%  Similarity=0.492  Sum_probs=22.5

Q ss_pred             HhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccC
Q psy5888         277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILD  319 (447)
Q Consensus       277 H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~  319 (447)
                      |++ +|.++++|.|.+|++.|.+...|..|+++|.++++|.|+
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A            3 SGS-SGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CCC-CCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCC-CCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            444 455555555555555555555555555555555555554

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.83  E-value=5.8e-10  Score=80.88  Aligned_cols=50  Identities=24%  Similarity=0.438  Sum_probs=28.0

Q ss_pred             CcccchhhHHHHhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCc
Q psy5888         266 RSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPT  316 (447)
Q Consensus       266 k~F~s~~~L~~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~  316 (447)
                      +.|.....|..|++ +|.++++|.|.+|++.|.....|..|+++|+++++|
T Consensus         4 k~~~~~~~l~~h~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            4 KRAKHPPGTEKPRS-RSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCCSCSSCCCCCHH-HHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             cccCCCcchhhHHH-hcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCC
Confidence            44555555555555 455555555555555555555555555555555554

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.83  E-value=9.4e-10  Score=79.72  Aligned_cols=52  Identities=25%  Similarity=0.359  Sum_probs=48.6

Q ss_pred             CCccCChHHHHHHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCC
Q psy5888         237 GKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFK  289 (447)
Q Consensus       237 gk~F~~~~~L~~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~  289 (447)
                      ++.|.....|..|+++|+++++|.|.+|++.|.....|..|++ +|+++++|.
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~kp~~   54 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLE-LRHFAKPGV   54 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHH-HHTTTSCCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHH-HhccCCCCC
Confidence            5778888999999999999999999999999999999999999 899999874

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1.4e-09  Score=75.80  Aligned_cols=44  Identities=41%  Similarity=0.653  Sum_probs=41.2

Q ss_pred             HHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCC
Q psy5888         248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPL  292 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~  292 (447)
                      +|+++|+++++|.|.+|++.|.....|.+|++ +|.++++|.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~~   45 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRG-IHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHT-TTTTSSCCCCSC
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHH-hhCCCCCCCCCC
Confidence            47889999999999999999999999999998 899999999974

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1e-09  Score=76.51  Aligned_cols=42  Identities=31%  Similarity=0.549  Sum_probs=22.0

Q ss_pred             HhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccC
Q psy5888         277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILD  319 (447)
Q Consensus       277 H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~  319 (447)
                      |++ +|.++++|.|.+|++.|.+...|..|+++|.++++|.|+
T Consensus         3 H~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yti_A            3 SGS-SGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCC-CCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred             CCc-CCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCC
Confidence            444 455555555555555555555555555555555555553

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.83  E-value=7.8e-10  Score=77.16  Aligned_cols=39  Identities=21%  Similarity=0.519  Sum_probs=20.0

Q ss_pred             hccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccC
Q psy5888         281 IHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILD  319 (447)
Q Consensus       281 ~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~  319 (447)
                      +|.++++|.|.+|++.|.+...|..|+++|.++++|.|+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            6 SGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             ccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            455555555555555555555555555555555555543

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1.1e-09  Score=76.38  Aligned_cols=44  Identities=39%  Similarity=0.679  Sum_probs=37.6

Q ss_pred             HHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCC
Q psy5888         248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPL  292 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~  292 (447)
                      +|+++|+++++|.|.+|++.|.....|.+|++ +|.++++|.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQR-VHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGG-GGCCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHH-HcCCCCCCCCCC
Confidence            46778888889999999999999999999988 788888888864

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.82  E-value=8e-10  Score=77.11  Aligned_cols=42  Identities=26%  Similarity=0.522  Sum_probs=22.0

Q ss_pred             HhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccC
Q psy5888         277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILD  319 (447)
Q Consensus       277 H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~  319 (447)
                      |++ +|.++++|.|.+|++.|.+...|..|+++|.++++|.|+
T Consensus         3 H~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A            3 SGS-SGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCC-CCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCC-CCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            444 455555555555555555555555555555555555553

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.5e-09  Score=75.54  Aligned_cols=44  Identities=41%  Similarity=0.662  Sum_probs=41.1

Q ss_pred             HHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCC
Q psy5888         248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPL  292 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~  292 (447)
                      +|+++|+++++|.|.+|++.|.+...|.+|++ +|.++++|.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~~   45 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRG-IHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHT-TTSCSCCSSTTC
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhH-hcCCCCCCCCCC
Confidence            47889999999999999999999999999998 899999999974

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.1e-09  Score=76.54  Aligned_cols=38  Identities=29%  Similarity=0.614  Sum_probs=17.5

Q ss_pred             hccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCccc
Q psy5888         281 IHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTIL  318 (447)
Q Consensus       281 ~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C  318 (447)
                      +|.++++|.|.+|++.|.+...|.+|+++|+++++|.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eon_A            6 SGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP   43 (46)
T ss_dssp             SCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTT
T ss_pred             CCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCC
Confidence            34444444444444444444444444444444444444

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=9.6e-10  Score=76.62  Aligned_cols=40  Identities=48%  Similarity=0.775  Sum_probs=16.6

Q ss_pred             hcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCC
Q psy5888         253 HTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLC  293 (447)
Q Consensus       253 H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C  293 (447)
                      |+++++|.|.+|++.|.+...|.+|++ +|.++++|.|.+|
T Consensus         7 h~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~C   46 (46)
T 2ep0_A            7 GTGEKPYKCDVCHKSFRYGSSLTVHQR-IHTGEKPSGPSSG   46 (46)
T ss_dssp             STTCCSEECSSSCCEESSHHHHHHHHT-TTSSSCCCSCCCC
T ss_pred             CCCCCCeeCcccCcccCChHHHHHHHH-HhCCCCCCCCCCC
Confidence            334444444444444444444444443 3444444444433

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.6e-09  Score=75.59  Aligned_cols=41  Identities=24%  Similarity=0.522  Sum_probs=24.4

Q ss_pred             hccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCC
Q psy5888         281 IHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDR  321 (447)
Q Consensus       281 ~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C  321 (447)
                      +|.++++|.|.+|++.|.+...|..|+++|+++++|.|+.|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            6 SGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45555566666666666666666666666665666665554

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.6e-09  Score=75.48  Aligned_cols=44  Identities=32%  Similarity=0.644  Sum_probs=41.3

Q ss_pred             HHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCC
Q psy5888         248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPL  292 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~  292 (447)
                      +|+++|+++++|.|.+|++.|.+...|.+|++ +|.++++|.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~   45 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQR-VHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGG-GGTTCCCSSCCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHH-hcCCCCCCCCCC
Confidence            47889999999999999999999999999998 899999999974

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=9.2e-10  Score=76.79  Aligned_cols=39  Identities=21%  Similarity=0.500  Sum_probs=19.1

Q ss_pred             hccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccC
Q psy5888         281 IHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILD  319 (447)
Q Consensus       281 ~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~  319 (447)
                      +|.++++|.|.+|++.|.+...|..|+++|.++++|.|+
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            6 SGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             SSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             CcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            444444444544555554444454454444444444443

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.82  E-value=1.3e-09  Score=76.05  Aligned_cols=44  Identities=45%  Similarity=0.708  Sum_probs=41.3

Q ss_pred             HHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCC
Q psy5888         248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPL  292 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~  292 (447)
                      .|+++|+++++|.|.+|++.|.+...|.+|++ +|.++++|.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~~   45 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQR-IHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHH-HHTTSCSSSSCC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHH-HhCCCCCCCCCC
Confidence            47889999999999999999999999999999 899999999974

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.1e-09  Score=74.49  Aligned_cols=42  Identities=26%  Similarity=0.534  Sum_probs=33.4

Q ss_pred             HHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCC
Q psy5888         249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCP  291 (447)
Q Consensus       249 H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~  291 (447)
                      |+++|.++++|.|.+|++.|.+...|.+|++ +|.++++|.|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQK-MHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHH-HTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHH-HhCCCCCCCCC
Confidence            4567788888888888888888888888887 68888888773

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.81  E-value=1.6e-09  Score=73.90  Aligned_cols=42  Identities=29%  Similarity=0.526  Sum_probs=39.6

Q ss_pred             HHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCC
Q psy5888         249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCP  291 (447)
Q Consensus       249 H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~  291 (447)
                      |+++|+++++|.|.+|++.|.+...|.+|++ +|.++++|.|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQR-THAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHG-GGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHH-hcCCCCCCCCC
Confidence            6778999999999999999999999999999 89999999985

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.6e-09  Score=74.45  Aligned_cols=41  Identities=20%  Similarity=0.363  Sum_probs=24.7

Q ss_pred             HhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCccc
Q psy5888         277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTIL  318 (447)
Q Consensus       277 H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C  318 (447)
                      |++ +|.++++|.|.+|++.|.+...|..|+++|.++++|.|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2en7_A            3 SGS-SGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS   43 (44)
T ss_dssp             SCC-CSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCC
T ss_pred             CCc-CCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCC
Confidence            444 45666666666666666666666666666666666655

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.7e-09  Score=75.37  Aligned_cols=42  Identities=29%  Similarity=0.519  Sum_probs=25.3

Q ss_pred             HhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccC
Q psy5888         277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILD  319 (447)
Q Consensus       277 H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~  319 (447)
                      |++ +|.++++|.|.+|++.|.+...|..|+++|+++++|.|+
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            3 SGS-SGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCC-CCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             ccc-ccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            455 556666666666666666666666666666666666554

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.4e-09  Score=75.80  Aligned_cols=43  Identities=26%  Similarity=0.510  Sum_probs=40.8

Q ss_pred             hhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCC
Q psy5888         278 VRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDR  321 (447)
Q Consensus       278 ~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C  321 (447)
                      ++ +|.++++|.|.+|++.|.+...|..|+++|+++++|.|+.|
T Consensus         4 ~~-~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            4 GS-SGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CC-SSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CC-CCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            45 79999999999999999999999999999999999999988

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.2e-09  Score=76.14  Aligned_cols=42  Identities=26%  Similarity=0.474  Sum_probs=21.6

Q ss_pred             HhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccC
Q psy5888         277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILD  319 (447)
Q Consensus       277 H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~  319 (447)
                      |++ +|.++++|.|.+|++.|.+...|..|+++|+++++|.|+
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em6_A            3 SGS-SGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCS-CCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTT
T ss_pred             Ccc-ccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            444 455555555555555555555555555555555555543

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.9e-09  Score=75.12  Aligned_cols=42  Identities=26%  Similarity=0.438  Sum_probs=26.7

Q ss_pred             HhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccC
Q psy5888         277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILD  319 (447)
Q Consensus       277 H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~  319 (447)
                      |++ +|.++++|.|.+|++.|.+...|..|+++|.++++|.|+
T Consensus         3 h~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en9_A            3 SGS-SGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCS-SCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred             CCC-CCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            455 566666666666666666666666666666666666664

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=2e-09  Score=74.94  Aligned_cols=44  Identities=32%  Similarity=0.558  Sum_probs=41.1

Q ss_pred             HHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCC
Q psy5888         248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPL  292 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~  292 (447)
                      .|+++|+++++|.|.+|++.|.+...|.+|++ +|.++++|.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~   45 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQK-IHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHT-TTSCCCCSCSCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHH-HhCCCCCCCCCC
Confidence            47889999999999999999999999999999 899999999974

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.1e-09  Score=76.29  Aligned_cols=38  Identities=32%  Similarity=0.644  Sum_probs=17.5

Q ss_pred             hccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCccc
Q psy5888         281 IHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTIL  318 (447)
Q Consensus       281 ~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C  318 (447)
                      +|.++++|.|.+|++.|.+...|..|+++|+++++|.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytf_A            6 SGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP   43 (46)
T ss_dssp             SSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCC
T ss_pred             CCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            34444444444444444444444444444444444444

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.1e-09  Score=76.38  Aligned_cols=42  Identities=21%  Similarity=0.443  Sum_probs=21.5

Q ss_pred             HhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccC
Q psy5888         277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILD  319 (447)
Q Consensus       277 H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~  319 (447)
                      |++ +|.++++|.|.+|++.|.+...|..|+++|.++++|.|+
T Consensus         3 H~~-~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            3 SGS-SGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCC-SCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCc-ccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            444 455555555555555555555555555555555555543

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.3e-09  Score=75.81  Aligned_cols=42  Identities=26%  Similarity=0.509  Sum_probs=24.4

Q ss_pred             HhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccC
Q psy5888         277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILD  319 (447)
Q Consensus       277 H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~  319 (447)
                      |++ +|.++++|.|.+|++.|.+...|..|+++|.++++|.|+
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A            3 SGS-SGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CCC-CSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             ccC-CCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            444 455555566666666666666666665555555555554

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.81  E-value=3.5e-10  Score=84.78  Aligned_cols=55  Identities=18%  Similarity=0.411  Sum_probs=48.7

Q ss_pred             HHHHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCCCcccCCchhHH
Q psy5888         246 LTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLD  304 (447)
Q Consensus       246 L~~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C~k~F~~~~~L~  304 (447)
                      |..|+++|+++++|.|++|++.|.....|.   + +|.++++|.|.+|++.|.....+.
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~-~H~~~k~~~C~~C~k~f~~~~~~~   56 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQ---L-FDPMTGTFRCTFCHTEVEEDESAM   56 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHH---H-EETTTTEEBCSSSCCBCEECTTCS
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhH---h-hcCCCCCEECCCCCCccccCcccc
Confidence            456889999999999999999999988886   5 799999999999999998876543

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.8e-09  Score=75.32  Aligned_cols=44  Identities=41%  Similarity=0.617  Sum_probs=41.2

Q ss_pred             HHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCC
Q psy5888         248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPL  292 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~  292 (447)
                      +|+++|+++++|.|.+|++.|.....|.+|++ +|.++++|.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~   45 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQR-VHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHT-TTSSSCCCCTTC
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHH-HcCCCCCCCCCC
Confidence            47889999999999999999999999999998 899999999974

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.5e-09  Score=75.66  Aligned_cols=43  Identities=28%  Similarity=0.594  Sum_probs=26.7

Q ss_pred             HHhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccC
Q psy5888         276 RHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILD  319 (447)
Q Consensus       276 ~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~  319 (447)
                      +|++ +|.++++|.|.+|++.|.+...|..|+++|.++++|.|+
T Consensus         2 ~H~~-~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em3_A            2 SSGS-SGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS   44 (46)
T ss_dssp             CCCC-CCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred             CCCC-CCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3555 566666666666666666666666666666666666654

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.1e-09  Score=76.23  Aligned_cols=42  Identities=45%  Similarity=0.715  Sum_probs=20.1

Q ss_pred             HHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCC
Q psy5888         249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCP  291 (447)
Q Consensus       249 H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~  291 (447)
                      |+++|+++++|.|.+|++.|.....|.+|++ +|.++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~p~~C~   44 (46)
T 2yts_A            3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRR-IHTGEKPSGPS   44 (46)
T ss_dssp             CSCCCCSCCSEECSSSCCEESSHHHHHHHGG-GTSSCCSSCCC
T ss_pred             CCCCCCCCcCEECCCCChhhCChHHHHHHHH-hcCCCCCcCCC
Confidence            3444444444444444444444444444444 44444444443

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.2e-09  Score=76.13  Aligned_cols=44  Identities=41%  Similarity=0.646  Sum_probs=36.8

Q ss_pred             HHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCC
Q psy5888         248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPL  292 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~  292 (447)
                      +|+++|+++++|.|.+|++.|.....|.+|++ +|.++++|.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~   45 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQV-IHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHT-TTCCSCCSSCCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHH-HhCCCCCCCCCC
Confidence            36778888888888888888888888888888 788888888863

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.3e-09  Score=76.02  Aligned_cols=39  Identities=23%  Similarity=0.480  Sum_probs=20.5

Q ss_pred             hccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccC
Q psy5888         281 IHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILD  319 (447)
Q Consensus       281 ~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~  319 (447)
                      +|.++++|.|.+|++.|.+...|..|+++|+++++|.|.
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            6 SGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             SCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            455555555555555555555555555555555555543

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.3e-09  Score=75.98  Aligned_cols=44  Identities=36%  Similarity=0.560  Sum_probs=41.2

Q ss_pred             HHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCC
Q psy5888         248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPL  292 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~  292 (447)
                      +|+++|+++++|.|.+|++.|.+...|.+|++ +|.++++|.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~~   45 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQR-IHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHT-TTSCCCCCSSCC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHH-HhCCCCCCCCCC
Confidence            47889999999999999999999999999999 899999999974

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=9.8e-10  Score=76.47  Aligned_cols=44  Identities=36%  Similarity=0.585  Sum_probs=34.8

Q ss_pred             HHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCC
Q psy5888         248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPL  292 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~  292 (447)
                      +|+++|+++++|.|.+|++.|.....|.+|++ +|.++++|.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~   45 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQA-THSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHH-HHCCCSCSCTTC
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHH-HcCCCCCCCCCC
Confidence            36677888888888888888888888888887 688888888764

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=9.5e-10  Score=76.53  Aligned_cols=39  Identities=26%  Similarity=0.577  Sum_probs=19.6

Q ss_pred             hccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccC
Q psy5888         281 IHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILD  319 (447)
Q Consensus       281 ~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~  319 (447)
                      +|.++++|.|.+|++.|.+...|..|+++|.++++|.|+
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A            6 SGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             SSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred             CcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence            444455555555555555555555555555555555443

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.2e-09  Score=76.22  Aligned_cols=42  Identities=38%  Similarity=0.612  Sum_probs=26.3

Q ss_pred             HHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCC
Q psy5888         251 RTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLC  293 (447)
Q Consensus       251 r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C  293 (447)
                      ++|.++++|.|.+|++.|.+...|.+|++ +|.++++|.|.+|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~C   46 (46)
T 2ytt_A            5 SSGEGEKPYQCSECGKSFSGSYRLTQHWI-THTREKPSGPSSG   46 (46)
T ss_dssp             SSCSCCCTTCCSSSCCCCSSHHHHHHHHT-HHHHCCCCSCCCC
T ss_pred             CCCCCCCCeeCCCCCcccCCHHHHHHHHH-HcCCCCCCCCCCC
Confidence            34566666666666666666666666665 5666666666655

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.3e-09  Score=76.05  Aligned_cols=43  Identities=35%  Similarity=0.589  Sum_probs=33.7

Q ss_pred             HHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCC
Q psy5888         249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPL  292 (447)
Q Consensus       249 H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~  292 (447)
                      |+++|+++++|.|.+|++.|.+...|.+|++ +|.++++|.|.+
T Consensus         3 h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~~   45 (46)
T 2en9_A            3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQR-IHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSCCSSCCCBCTTTCCBCSSHHHHHHHHH-HHTSSCCCSCCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHH-HcCCCCCCCCCC
Confidence            5667778888888888888888888888877 688888887764

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=2.6e-09  Score=74.46  Aligned_cols=44  Identities=27%  Similarity=0.572  Sum_probs=40.9

Q ss_pred             HHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCC
Q psy5888         248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPL  292 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~  292 (447)
                      .|+++|+++++|.|.+|++.|.....|.+|++ +|.++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~   45 (46)
T 2eoh_A            2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKR-VHTGERSSGPSS   45 (46)
T ss_dssp             CCCCSCCCSCSCCCSSSCCCCSSHHHHHHHHH-HCSSCCSCSTTC
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHH-HhCCCCCCCCCC
Confidence            37789999999999999999999999999999 899999999973

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.80  E-value=1.8e-09  Score=75.30  Aligned_cols=44  Identities=34%  Similarity=0.552  Sum_probs=41.2

Q ss_pred             HHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCC
Q psy5888         248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPL  292 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~  292 (447)
                      .|+++|+++++|.|.+|++.|.+...|.+|++ +|.++++|.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~   45 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRR-SHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHHH-HHSSSSCCCCCC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHHH-hcCCCCCCCCCC
Confidence            37889999999999999999999999999999 899999999974

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.9e-09  Score=75.03  Aligned_cols=44  Identities=36%  Similarity=0.556  Sum_probs=41.1

Q ss_pred             HHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCC
Q psy5888         248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPL  292 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~  292 (447)
                      .|+++|+++++|.|.+|++.|.+...|.+|++ +|.++++|.|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~~   45 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQR-IHRGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHG-GGCSCCCCSCCC
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHh-HhCCCCCCCCCC
Confidence            47889999999999999999999999999999 899999999974

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.80  E-value=1.8e-09  Score=76.18  Aligned_cols=40  Identities=25%  Similarity=0.465  Sum_probs=19.7

Q ss_pred             cCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCCC
Q psy5888         254 TGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCD  294 (447)
Q Consensus       254 ~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C~  294 (447)
                      .++++|.|.+|++.|.+...|.+|++ +|.++++|.|.+|+
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~C~   47 (48)
T 2epr_A            8 RTRKQVACEICGKIFRDVYHLNRHKL-SHSGEKPYSSGPSS   47 (48)
T ss_dssp             CCCCSEEETTTTEEESSHHHHHHHGG-GSCSCCCCCSCCCC
T ss_pred             CCCcCeeCCCCCcccCCHHHHHHHHH-hcCCCCCccCCCCC
Confidence            34444555555555555555555544 44444455555444

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.4e-09  Score=74.81  Aligned_cols=43  Identities=30%  Similarity=0.462  Sum_probs=36.6

Q ss_pred             HHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCC
Q psy5888         248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCP  291 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~  291 (447)
                      +|+++|+++++|.|.+|++.|.....|.+|++ +|.++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTR-THTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHT-TTCCSSSSCCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhh-hcCCCCCCCCC
Confidence            46778888888999999999999989999988 78888888884

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=1.1e-09  Score=76.29  Aligned_cols=44  Identities=34%  Similarity=0.659  Sum_probs=34.6

Q ss_pred             HHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCC
Q psy5888         248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPL  292 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~  292 (447)
                      +|+++|+++++|.|.+|++.|.+...|.+|++ +|.++++|.|.+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~-~H~~~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQK-THTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHH-HHCCCCCCCSCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHH-HhCCCCCCCCCC
Confidence            36677888888888888888888888888887 688888888764

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=2.1e-09  Score=75.05  Aligned_cols=43  Identities=37%  Similarity=0.712  Sum_probs=40.6

Q ss_pred             HHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCC
Q psy5888         249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPL  292 (447)
Q Consensus       249 H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~  292 (447)
                      |+++|+++++|.|.+|++.|.+...|.+|++ +|.++++|.|++
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~   45 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHS-VHSGERPSGPSS   45 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTT-TTTSCCSCTTSC
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHH-hcCCCCCCCCCC
Confidence            6788999999999999999999999999998 899999999974

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=1.5e-09  Score=75.44  Aligned_cols=44  Identities=36%  Similarity=0.624  Sum_probs=41.2

Q ss_pred             HHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCC
Q psy5888         248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPL  292 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~  292 (447)
                      +|+++|+++++|.|.+|++.|.+...|.+|++ +|.++++|.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~   45 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQR-THTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHH-TSCSSSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHH-HhCCCCCCCCCC
Confidence            47889999999999999999999999999999 899999999974

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.79  E-value=2e-09  Score=74.64  Aligned_cols=41  Identities=29%  Similarity=0.571  Sum_probs=21.2

Q ss_pred             hcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCCC
Q psy5888         253 HTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCD  294 (447)
Q Consensus       253 H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C~  294 (447)
                      |+++++|.|.+|++.|.....|.+|++ +|.++++|.|++||
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~l~~H~~-~H~~~~~~~C~~cg   45 (45)
T 2epq_A            5 SSGEKPYSCPVCGLRFKRKDRMSYHVR-SHDGSVGKSGPSSG   45 (45)
T ss_dssp             CSSCCSSEETTTTEECSCHHHHHHHHH-HHSCCCCCCCCCCC
T ss_pred             cCCCCCCcCCCCCcccCCHHHHHHHHH-HccCCCCCCCcCCC
Confidence            444555555555555555555555554 45555555555553

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=1.3e-09  Score=75.84  Aligned_cols=39  Identities=31%  Similarity=0.664  Sum_probs=19.5

Q ss_pred             hccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccC
Q psy5888         281 IHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILD  319 (447)
Q Consensus       281 ~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~  319 (447)
                      +|.++++|.|.+|++.|.+...|..|+++|.++++|.|+
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            6 SGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            444455555555555555555555555555555555443

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=1.4e-09  Score=75.88  Aligned_cols=42  Identities=24%  Similarity=0.495  Sum_probs=26.1

Q ss_pred             HhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccC
Q psy5888         277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILD  319 (447)
Q Consensus       277 H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~  319 (447)
                      |++ +|.++++|.|.+|++.|.+...|..|+++|+++++|.|+
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            3 SGS-SGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             SCC-CCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             ccc-cCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            555 566666666666666666666666666666666666654

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=1.8e-09  Score=75.31  Aligned_cols=42  Identities=29%  Similarity=0.576  Sum_probs=26.8

Q ss_pred             HhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccC
Q psy5888         277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILD  319 (447)
Q Consensus       277 H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~  319 (447)
                      |++ +|.++++|.|.+|++.|.+...|..|+++|.++++|.|+
T Consensus         3 h~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            3 SGS-SGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCS-CSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCc-CCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            555 566666666666666666666666666666666666664

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=1.7e-09  Score=75.27  Aligned_cols=44  Identities=39%  Similarity=0.687  Sum_probs=41.2

Q ss_pred             HHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCC
Q psy5888         248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPL  292 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~  292 (447)
                      +|+++|+++++|.|.+|++.|.....|.+|++ +|.++++|.|.+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~   45 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQR-IHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHT-TTSSCCSSCSCC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHH-HcCCCCCCCCCC
Confidence            47889999999999999999999999999998 899999999974

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=1.6e-09  Score=75.34  Aligned_cols=44  Identities=27%  Similarity=0.515  Sum_probs=41.3

Q ss_pred             HHhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCC
Q psy5888         276 RHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDD  320 (447)
Q Consensus       276 ~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~  320 (447)
                      +|++ +|.++++|.|.+|++.|.+...|..|+++|.++++|.|+.
T Consensus         2 ~H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            2 SSGS-SGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSC-CCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCC-CCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            5777 8999999999999999999999999999999999999964

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=1.7e-09  Score=75.17  Aligned_cols=44  Identities=41%  Similarity=0.665  Sum_probs=41.3

Q ss_pred             HHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCC
Q psy5888         248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPL  292 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~  292 (447)
                      .|+++|+++++|.|.+|++.|.+...|.+|++ +|.++++|.|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~kp~~C~~   45 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQR-IHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHH-HHHSCCCSSSTT
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHH-hcCCCCCCCCCC
Confidence            47889999999999999999999999999999 899999999975

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.78  E-value=2.9e-09  Score=75.11  Aligned_cols=41  Identities=34%  Similarity=0.756  Sum_probs=27.9

Q ss_pred             CCCCCccCCCCCCccCChHHHHHHHHHhcCCCcccCCCCCC
Q psy5888         226 KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCER  266 (447)
Q Consensus       226 ~~~k~~~C~~Cgk~F~~~~~L~~H~r~H~~ekp~~C~~C~k  266 (447)
                      ..+++|.|.+|++.|.....|.+|+++|+++++|.|.+|++
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            8 RTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            34456777777777777777777777777777777777764

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=1.8e-09  Score=74.22  Aligned_cols=41  Identities=24%  Similarity=0.498  Sum_probs=23.3

Q ss_pred             HhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCccc
Q psy5888         277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTIL  318 (447)
Q Consensus       277 H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C  318 (447)
                      |++ +|.++++|.|.+|++.|.+...|..|+++|.++++|.|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A            3 SGS-SGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             CSS-CCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             Ccc-CCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            444 45555555555555555555555555555555555555

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.78  E-value=2.1e-09  Score=74.10  Aligned_cols=41  Identities=32%  Similarity=0.515  Sum_probs=25.5

Q ss_pred             HhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCccc
Q psy5888         277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTIL  318 (447)
Q Consensus       277 H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C  318 (447)
                      |++ +|.++++|.|.+|++.|.+...|..|+++|+++++|.|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2yu5_A            3 SGS-SGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSS   43 (44)
T ss_dssp             CSC-CCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCC
T ss_pred             Ccc-ccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCC
Confidence            555 56666666666666666666666666666666666655

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=1.4e-09  Score=73.97  Aligned_cols=41  Identities=32%  Similarity=0.688  Sum_probs=21.4

Q ss_pred             HHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCC
Q psy5888         249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC  290 (447)
Q Consensus       249 H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C  290 (447)
                      |+++|+++++|.|.+|++.|.....|.+|++ +|.++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIR-VHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGG-GTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHH-HhCCCCCCCC
Confidence            3444555555555555555555555555554 4555555544

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=1.8e-09  Score=75.33  Aligned_cols=43  Identities=23%  Similarity=0.456  Sum_probs=26.7

Q ss_pred             HHhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccC
Q psy5888         276 RHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILD  319 (447)
Q Consensus       276 ~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~  319 (447)
                      +|++ +|.++++|.|.+|++.|.+...|..|+++|.++++|.|+
T Consensus         2 ~H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGS-SGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCC-CCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             Cccc-ccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            3555 566666666666666666666666666666666666654

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=8.3e-10  Score=77.03  Aligned_cols=44  Identities=32%  Similarity=0.654  Sum_probs=35.9

Q ss_pred             HHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCC
Q psy5888         248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPL  292 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~  292 (447)
                      +|+++|+++++|.|.+|++.|.....|.+|++ +|.++++|.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~   45 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLR-VHTQETLSGPSS   45 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHH-HHSSCCSSSCCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHH-HhCCCCCCCCCC
Confidence            36777888888888888888888888888887 788888888863

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=1.2e-09  Score=75.23  Aligned_cols=41  Identities=22%  Similarity=0.432  Sum_probs=21.7

Q ss_pred             HhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCccc
Q psy5888         277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTIL  318 (447)
Q Consensus       277 H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C  318 (447)
                      |++ +|.++++|.|.+|++.|.+...|..|+++|.++++|.|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eoj_A            3 SGS-SGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS   43 (44)
T ss_dssp             SCC-SSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCC
T ss_pred             Ccc-ccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            444 45555555555555555555555555555555555554

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=2.1e-09  Score=74.96  Aligned_cols=39  Identities=26%  Similarity=0.660  Sum_probs=20.1

Q ss_pred             hccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccC
Q psy5888         281 IHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILD  319 (447)
Q Consensus       281 ~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~  319 (447)
                      +|.++++|.|.+|++.|.+...|..|+++|.++++|.|+
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            6 SGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            445555555555555555555555555555555555543

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=2e-09  Score=74.08  Aligned_cols=43  Identities=28%  Similarity=0.476  Sum_probs=40.4

Q ss_pred             HHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCC
Q psy5888         248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCP  291 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~  291 (447)
                      .|+++|+++++|.|.+|++.|.+...|.+|++ +|.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQK-THSGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHT-TSSSSCSCCCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHH-HcCCCCCCCCC
Confidence            47889999999999999999999999999999 89999999985

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=1.7e-09  Score=74.42  Aligned_cols=43  Identities=35%  Similarity=0.604  Sum_probs=35.0

Q ss_pred             HHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCC
Q psy5888         248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCP  291 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~  291 (447)
                      +|+++|+++++|.|.+|++.|.+...|.+|++ +|.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQR-THTGESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHH-HTTTSSCSCCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHH-HhCCCCCCCCC
Confidence            36777888888888888888888888888887 78888888874

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=1e-09  Score=76.52  Aligned_cols=43  Identities=33%  Similarity=0.551  Sum_probs=34.6

Q ss_pred             HHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCC
Q psy5888         248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCP  291 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~  291 (447)
                      +|+++|+++++|.|.+|++.|.....|.+|++ +|.++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQ-SHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHH-HHTCCCBTTTB
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHH-HcCCCCCCCCC
Confidence            46677888888888888888888888888887 68888888875

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=1.9e-09  Score=73.56  Aligned_cols=38  Identities=32%  Similarity=0.672  Sum_probs=18.7

Q ss_pred             hccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCccc
Q psy5888         281 IHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTIL  318 (447)
Q Consensus       281 ~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C  318 (447)
                      +|.++++|.|.+|++.|.+...|..|+++|.++++|.|
T Consensus         5 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            5 SSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             ccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            34444445555555555555555555444544444444

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=1.8e-09  Score=75.34  Aligned_cols=38  Identities=29%  Similarity=0.427  Sum_probs=18.5

Q ss_pred             hccCCCCCCCCCCCcccCCchhHHHHHhhhcC-CCCccc
Q psy5888         281 IHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEA-DGPTIL  318 (447)
Q Consensus       281 ~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~-ekp~~C  318 (447)
                      +|.++++|.|.+|++.|.+...|..|+++|.+ +++|.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C   44 (46)
T 2eoy_A            6 SGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPS   44 (46)
T ss_dssp             CCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSS
T ss_pred             ccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCC
Confidence            34444444444444444444444444444444 444444

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=1.7e-09  Score=73.64  Aligned_cols=42  Identities=29%  Similarity=0.604  Sum_probs=39.6

Q ss_pred             HHhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCccc
Q psy5888         276 RHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTIL  318 (447)
Q Consensus       276 ~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C  318 (447)
                      +|++ +|.++++|.|.+|++.|.+...|..|+++|.++++|.|
T Consensus         1 ~H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            1 GSSG-SSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCC-CCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CCcc-ccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            4777 79999999999999999999999999999999999987

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=3.6e-09  Score=73.74  Aligned_cols=43  Identities=37%  Similarity=0.704  Sum_probs=40.2

Q ss_pred             HHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCC
Q psy5888         249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPL  292 (447)
Q Consensus       249 H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~  292 (447)
                      |+++|+++++|.|.+|++.|.+...|.+|++ +|.++++|.|..
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~~   45 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQR-VHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGG-GSCCSCCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHH-HhCCCCCCCCCC
Confidence            5678999999999999999999999999999 899999999963

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=1.5e-09  Score=75.68  Aligned_cols=43  Identities=33%  Similarity=0.652  Sum_probs=34.5

Q ss_pred             HHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCC
Q psy5888         248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCP  291 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~  291 (447)
                      +|+++|.++++|.|.+|++.|.....|.+|++ +|.++++|.|.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLR-LHSREKSSGPS   44 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHH-HHHHTTCCCSC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHH-HhCCCCCCCCC
Confidence            36677888888888888888888888888887 68888888876

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=2e-09  Score=74.23  Aligned_cols=41  Identities=22%  Similarity=0.379  Sum_probs=20.9

Q ss_pred             HhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCccc
Q psy5888         277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTIL  318 (447)
Q Consensus       277 H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C  318 (447)
                      |++ +|.++++|.|.+|++.|.+...|..|+++|.++++|.|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2emb_A            3 SGS-SGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSS   43 (44)
T ss_dssp             CCS-CCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTC
T ss_pred             ccc-ccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCC
Confidence            444 45555555555555555555555555555555555544

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=1.9e-09  Score=74.35  Aligned_cols=43  Identities=28%  Similarity=0.550  Sum_probs=36.3

Q ss_pred             HHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCC
Q psy5888         248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCP  291 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~  291 (447)
                      +|+++|+++++|.|.+|++.|.....|.+|++ +|.++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHER-THARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHH-HCCCCCSSCCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhH-hcCCCCCCCCC
Confidence            46778888888888888888888888888888 78888888874

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=2.1e-09  Score=74.06  Aligned_cols=43  Identities=16%  Similarity=0.382  Sum_probs=36.6

Q ss_pred             HHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCC
Q psy5888         248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCP  291 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~  291 (447)
                      .|+++|+++++|.|.+|++.|.....|..|++ +|.++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQK-THAAKSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGG-GGCCCCCTTCC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHH-HcCCCCCcCCC
Confidence            46778888888999889999998888999988 78888888884

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=3.2e-09  Score=72.37  Aligned_cols=41  Identities=32%  Similarity=0.635  Sum_probs=38.9

Q ss_pred             HHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCC
Q psy5888         249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC  290 (447)
Q Consensus       249 H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C  290 (447)
                      |+++|.++++|.|.+|++.|.....|.+|++ +|.++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLR-IHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTT-TTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHH-hcCCCCCCCC
Confidence            6778999999999999999999999999999 8999999988

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=2.5e-09  Score=74.31  Aligned_cols=42  Identities=24%  Similarity=0.486  Sum_probs=25.2

Q ss_pred             HhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccC
Q psy5888         277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILD  319 (447)
Q Consensus       277 H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~  319 (447)
                      |++ +|.++++|.|.+|++.|.+...|..|+++|.++++|.|+
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            3 SGS-SGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCC-SSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             ccc-CCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            444 556666666666666666666666666666666666554

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=5.1e-09  Score=72.21  Aligned_cols=41  Identities=15%  Similarity=0.217  Sum_probs=26.8

Q ss_pred             HhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCccc
Q psy5888         277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTIL  318 (447)
Q Consensus       277 H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C  318 (447)
                      |++ +|.++++|.|.+|++.|.+...|..|+++|.++++|.|
T Consensus         3 h~~-~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            3 SGS-SGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             CSC-SCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCC-CCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            444 56666666666666666666666666666666666666

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=1.5e-09  Score=73.98  Aligned_cols=38  Identities=34%  Similarity=0.600  Sum_probs=18.6

Q ss_pred             hccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCccc
Q psy5888         281 IHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTIL  318 (447)
Q Consensus       281 ~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C  318 (447)
                      +|.++++|.|.+|++.|.+...|..|+++|.++++|.|
T Consensus         5 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            5 SSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             ccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            34444445555555555555555555444444444443

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.73  E-value=2.2e-09  Score=73.05  Aligned_cols=38  Identities=26%  Similarity=0.543  Sum_probs=20.1

Q ss_pred             hccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCccc
Q psy5888         281 IHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTIL  318 (447)
Q Consensus       281 ~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C  318 (447)
                      +|.++++|.|.+|++.|.+...|..|+++|.++++|.|
T Consensus         5 ~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            5 SSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             cCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            45555555555555555555555555555555555544

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.73  E-value=3.6e-09  Score=73.69  Aligned_cols=43  Identities=33%  Similarity=0.485  Sum_probs=40.5

Q ss_pred             HHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccC-CCCCCCCC
Q psy5888         249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNK-EKPFKCPL  292 (447)
Q Consensus       249 H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~-~kp~~C~~  292 (447)
                      |+++|.++++|.|.+|++.|.....|.+|++ +|.+ +++|.|.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~~C~~   46 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHER-IHTRGVKSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHT-TCCSCCTTSSSCC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHH-HcCCCCCCCCCCC
Confidence            7789999999999999999999999999998 8999 99999974

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.73  E-value=4e-09  Score=71.74  Aligned_cols=41  Identities=29%  Similarity=0.527  Sum_probs=38.9

Q ss_pred             HHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCC
Q psy5888         249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC  290 (447)
Q Consensus       249 H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C  290 (447)
                      |+++|+++++|.|.+|++.|.....|.+|++ +|.++++|.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~-~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQR-SCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHH-HTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhh-hcCCCCCCCC
Confidence            5678999999999999999999999999999 8999999998

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=2.2e-09  Score=74.59  Aligned_cols=43  Identities=37%  Similarity=0.688  Sum_probs=36.6

Q ss_pred             HHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCC
Q psy5888         248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCP  291 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~  291 (447)
                      +|+++|+++++|.|.+|++.|.....|.+|++ +|.++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQA-IHTGKKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHT-TSCCCCCCCSC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHH-HhCCCCCCCCC
Confidence            36778888888888888888888888888888 78888888886

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=2.7e-09  Score=72.64  Aligned_cols=41  Identities=34%  Similarity=0.625  Sum_probs=39.0

Q ss_pred             HHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCC
Q psy5888         249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC  290 (447)
Q Consensus       249 H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C  290 (447)
                      |+++|+++++|.|.+|++.|.+...|.+|++ +|.++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVL-IHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTH-HHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHH-HcCCCCCCCC
Confidence            6778999999999999999999999999999 8999999988

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=2.5e-09  Score=74.44  Aligned_cols=42  Identities=31%  Similarity=0.507  Sum_probs=24.9

Q ss_pred             HhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccC
Q psy5888         277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILD  319 (447)
Q Consensus       277 H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~  319 (447)
                      |++ +|.++++|.|.+|++.|.+...|..|+++|.++++|.|.
T Consensus         3 H~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            3 SGS-SGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCC-CSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccc-ccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            454 455666666666666666666666666666666666553

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=1.9e-09  Score=75.12  Aligned_cols=43  Identities=35%  Similarity=0.634  Sum_probs=35.9

Q ss_pred             HHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCC
Q psy5888         248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCP  291 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~  291 (447)
                      +|+++|+++++|.|.+|++.|.....|.+|++ +|.++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLR-SHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHH-HHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHH-HhCCCCCCCCC
Confidence            46778888888888888888888888888887 78888888885

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.71  E-value=7.3e-09  Score=72.19  Aligned_cols=39  Identities=23%  Similarity=0.436  Sum_probs=25.3

Q ss_pred             hccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccC
Q psy5888         281 IHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILD  319 (447)
Q Consensus       281 ~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~  319 (447)
                      +|.++++|.|.+|++.|.+...|..|+++|+++++|.|+
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            6 SGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            466666666666666666666666666666666666664

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.71  E-value=3.5e-09  Score=73.04  Aligned_cols=42  Identities=21%  Similarity=0.284  Sum_probs=28.9

Q ss_pred             HHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCC
Q psy5888         249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCP  291 (447)
Q Consensus       249 H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~  291 (447)
                      |+++|.++++|.|.+|++.|.....|.+|++ +|.++++|.|.
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQA-LHAGESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHH-HHTTSCCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHH-HHCCCCCCCCC
Confidence            4556667777777777777777777777776 67777777663

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=2.7e-09  Score=73.52  Aligned_cols=41  Identities=22%  Similarity=0.374  Sum_probs=22.3

Q ss_pred             HhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCccc
Q psy5888         277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTIL  318 (447)
Q Consensus       277 H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C  318 (447)
                      |++ +|.++++|.|.+|++.|.+...|..|+++|+++++|.|
T Consensus         3 H~~-~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            3 SGS-SGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCC-CCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCc-CCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            444 45555555555555555555555555555555555554

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=4.3e-09  Score=72.70  Aligned_cols=38  Identities=24%  Similarity=0.374  Sum_probs=18.9

Q ss_pred             hccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCccc
Q psy5888         281 IHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTIL  318 (447)
Q Consensus       281 ~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C  318 (447)
                      +|.++++|.|.+|++.|.+...|..|+++|+++++|.|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            6 SGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             ccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            44444555555555555555555555555554444443

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=4.3e-09  Score=73.71  Aligned_cols=40  Identities=40%  Similarity=0.599  Sum_probs=16.9

Q ss_pred             hcCCCcccCC--CCCCcccchhhHHHHhhhhccCCCCCCCCCC
Q psy5888         253 HTGEQPYKCK--YCERSFSISSNLQRHVRNIHNKEKPFKCPLC  293 (447)
Q Consensus       253 H~~ekp~~C~--~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C  293 (447)
                      |+++++|.|.  .|++.|.....|.+|++ +|.++++|+|.+|
T Consensus         7 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~C   48 (48)
T 2ent_A            7 GTGEKPFACTWPGCGWRFSRSDELSRHRR-SHSGVKPSGPSSG   48 (48)
T ss_dssp             SCCCCCEECCSSSCCCEESSHHHHHHHHT-TSCCCCSCSSCCC
T ss_pred             cCCCCCeECCCCCCCCccCCHHHHHHHHH-HhCCCCCCCCCCC
Confidence            3444444443  34444444444444443 3444444444433

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=2.3e-09  Score=73.94  Aligned_cols=43  Identities=23%  Similarity=0.457  Sum_probs=36.5

Q ss_pred             HHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCC
Q psy5888         248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCP  291 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~  291 (447)
                      +|+++|+++++|.|.+|++.|.+...|.+|++ +|.++++|.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~-~H~~~~~~~C~   44 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQK-IHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHH-HHCCCCCCSCC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHH-HhCCCCCCCCC
Confidence            46778888888999999999998888999988 78888888874

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=6e-09  Score=71.94  Aligned_cols=43  Identities=28%  Similarity=0.435  Sum_probs=40.1

Q ss_pred             HHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCC
Q psy5888         248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCP  291 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~  291 (447)
                      .|+++|+++++|.|.+|++.|.....|..|++ +|.++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~~g   44 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHER-THAGVSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHG-GGSSCSCCCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHh-HhcCCCCCCCC
Confidence            47889999999999999999999999999999 89999999873

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.67  E-value=6e-09  Score=72.66  Aligned_cols=40  Identities=35%  Similarity=0.561  Sum_probs=24.0

Q ss_pred             HHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCC
Q psy5888         251 RTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCP  291 (447)
Q Consensus       251 r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~  291 (447)
                      ++|+++++|.|.+|++.|.+...|.+|++ +|.++++|.|.
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2eom_A            5 SSGHGERGHRCSDCGKFFLQASNFIQHRR-IHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCCSSSCCCCSSHHHHHHHHH-HHSSCCCSSCC
T ss_pred             CCCCCCCCcCCCCCCCeeCChHHHHHHHH-HhCCCCCCCCC
Confidence            34555666666666666666666666655 56666666654

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.67  E-value=7.5e-09  Score=72.44  Aligned_cols=44  Identities=27%  Similarity=0.450  Sum_probs=41.1

Q ss_pred             HhhhhccCCCCCCCC--CCCcccCCchhHHHHHhhhcCCCCcccCCC
Q psy5888         277 HVRNIHNKEKPFKCP--LCDRCFGQQTNLDRHLKKHEADGPTILDDR  321 (447)
Q Consensus       277 H~~~~H~~~kp~~C~--~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C  321 (447)
                      |.+ +|.++++|.|.  .|++.|.....|..|+++|.++++|.|..|
T Consensus         3 ~~~-~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            3 SGS-SGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCC-SSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCC-CcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            455 79999999998  899999999999999999999999999988

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.65  E-value=1.9e-08  Score=69.06  Aligned_cols=39  Identities=23%  Similarity=0.377  Sum_probs=22.7

Q ss_pred             hccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccC
Q psy5888         281 IHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILD  319 (447)
Q Consensus       281 ~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~  319 (447)
                      .|.++++|.|.+|++.|.+...|..|+++|+++++|.|+
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            4 GSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             CcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            355555566666666666555566665555555555554

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.65  E-value=1.3e-08  Score=69.86  Aligned_cols=39  Identities=23%  Similarity=0.454  Sum_probs=22.4

Q ss_pred             HhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCC
Q psy5888         252 THTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCP  291 (447)
Q Consensus       252 ~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~  291 (447)
                      +|+++++|.|.+|++.|.....|.+|++ +|.++++|.|.
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~   42 (43)
T 2yrm_A            4 GSSGNGAFFCNECDCRFSEEASLKRHTL-QTHSDKSGPSS   42 (43)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHHH-HHTCTTCSSSC
T ss_pred             CcCCCCCEECCCCCCeeCChHHHHHHHH-hhCCCCCccCC
Confidence            3555555555555555555555555555 45555555554

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.64  E-value=8.2e-10  Score=86.40  Aligned_cols=65  Identities=18%  Similarity=0.223  Sum_probs=35.7

Q ss_pred             HHHHHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCC
Q psy5888         245 NLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEAD  313 (447)
Q Consensus       245 ~L~~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~e  313 (447)
                      .|..|+++|.+++++.|.+|++.|. ...|..|+  .|.++++|.|..|++.|.+ ..|..|+++|.++
T Consensus         4 ~L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~--~~c~~~~~~C~~C~~~~~~-~~l~~H~~~c~~~   68 (75)
T 2d9k_A            4 GSSGHEETECPLRLAVCQHCDLELS-ILKLKEHE--DYCGARTELCGNCGRNVLV-KDLKTHPEVCGRE   68 (75)
T ss_dssp             CCSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH--HHHHHCEEECSSSCCEEET-TGGGTHHHHBTTB
T ss_pred             HHHhhCcccCCCcccCCcccChHhh-HHHHHHHH--hHcCCCceEcccCCCcCcH-HHHHHHHHHccCC
Confidence            3445555555556666666665553 55555554  2555555666666555542 5555565555443

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=4.8e-09  Score=72.72  Aligned_cols=37  Identities=27%  Similarity=0.553  Sum_probs=15.4

Q ss_pred             ccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCccc
Q psy5888         282 HNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTIL  318 (447)
Q Consensus       282 H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C  318 (447)
                      |.++++|.|.+|++.|.+...|..|+++|+++++|.|
T Consensus         7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (45)
T 2epu_A            7 GTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS   43 (45)
T ss_dssp             CCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCS
T ss_pred             CCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCC
Confidence            3344444444444444444444444444444444443

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.62  E-value=9.4e-09  Score=71.18  Aligned_cols=42  Identities=36%  Similarity=0.599  Sum_probs=39.0

Q ss_pred             HHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCC
Q psy5888         250 LRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPL  292 (447)
Q Consensus       250 ~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~  292 (447)
                      .++|+++++|.|.+|++.|.....|.+|++ +|.++++|.|.+
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~~   45 (45)
T 2epu_A            4 GSSGTGQKPFECTHCGKSFRAKGNLVTHQR-IHTGEKSGPSSG   45 (45)
T ss_dssp             CCCCCSCCSEEETTTTEEESSHHHHHHHHT-TTSSCCCCCSCC
T ss_pred             CCCCCCCcCccCCCCCCccCChHHHHHHHH-HhCCCCCCCCCC
Confidence            457999999999999999999999999999 899999999974

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.60  E-value=1.9e-08  Score=68.10  Aligned_cols=37  Identities=32%  Similarity=0.653  Sum_probs=17.1

Q ss_pred             hcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCC
Q psy5888         253 HTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC  290 (447)
Q Consensus       253 H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C  290 (447)
                      |+++++|.|.+|++.|.....|..|++ +|.++++|.|
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C   41 (41)
T 2ept_A            5 SSGQRVYECQECGKSFRQKGSLTLHER-IHTGSGPSSG   41 (41)
T ss_dssp             CCCCCCEECSSSCCEESSHHHHHHHGG-GCCCCSCSCC
T ss_pred             cCCCCCeECCCCCCCcCCHHHHHHHHH-HhCCCCCcCC
Confidence            444444444444444444444444444 3444444443

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.58  E-value=1.9e-08  Score=68.06  Aligned_cols=38  Identities=24%  Similarity=0.517  Sum_probs=36.7

Q ss_pred             hccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCccc
Q psy5888         281 IHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTIL  318 (447)
Q Consensus       281 ~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C  318 (447)
                      +|.++++|.|.+|++.|.+...|..|+++|+++++|.|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            4 GSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             ccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            68999999999999999999999999999999999987

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.49  E-value=1.2e-09  Score=88.19  Aligned_cols=41  Identities=17%  Similarity=0.387  Sum_probs=22.6

Q ss_pred             ccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCCC
Q psy5888         282 HNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDRN  322 (447)
Q Consensus       282 H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C~  322 (447)
                      |.++++|.|.+|++.|.+...|..|+++|+++++|.|..|.
T Consensus        20 H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~   60 (88)
T 1x6f_A           20 RLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQE   60 (88)
T ss_dssp             CCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCS
T ss_pred             cCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhh
Confidence            55555555555555555555555555555555555554443

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.46  E-value=1.1e-08  Score=79.93  Aligned_cols=67  Identities=12%  Similarity=0.059  Sum_probs=58.5

Q ss_pred             hhhHHHHhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcccCCCCCCCCChhhhhhccCCCCCC
Q psy5888         271 SSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTILDDRNGGIPSPSMIHNRCRPPSGI  341 (447)
Q Consensus       271 ~~~L~~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C~k~f~s~~~l~~H~~~h~~~  341 (447)
                      +..|..|++ .|.+++++.|.+|++.|. ...|..|+ .|.++++|.|..|++.|. ...|..|+..|...
T Consensus         2 ~~~L~~H~~-~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~   68 (75)
T 2d9k_A            2 SSGSSGHEE-TECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGRE   68 (75)
T ss_dssp             CCCCSCCCC-CCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTB
T ss_pred             chHHHhhCc-ccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccCC
Confidence            356888988 799999999999999994 89999999 899999999999999887 47888898776653

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.44  E-value=9.1e-08  Score=63.98  Aligned_cols=36  Identities=22%  Similarity=0.600  Sum_probs=18.2

Q ss_pred             cCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCC
Q psy5888         254 TGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKC  290 (447)
Q Consensus       254 ~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C  290 (447)
                      +++++|.|.+|++.|.....|..|++ +|.++++|.|
T Consensus         2 ~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~~   37 (39)
T 1njq_A            2 WPPRSYTCSFCKREFRSAQALGGHMN-VHRRDRARLR   37 (39)
T ss_dssp             CCSSSEECTTTCCEESSHHHHHHHHH-TTCCSCTTTT
T ss_pred             CCCCceECCCCCcccCCHHHHHHHHH-HcCCCcccee
Confidence            34455555555555555555555554 4555554443

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.41  E-value=4.1e-08  Score=79.16  Aligned_cols=59  Identities=20%  Similarity=0.366  Sum_probs=50.1

Q ss_pred             HHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcC
Q psy5888         249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEA  312 (447)
Q Consensus       249 H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~  312 (447)
                      |.++|+++++|.|.+|++.|.....|..|++ +|.++++|+|..|.    ....|..|.+.|.+
T Consensus        16 ~~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~-~Ht~ekp~~C~~~~----~~~~~~~~~~~~~~   74 (88)
T 1x6f_A           16 GNGPRLQNSTYQCKHCDSKLQSTAELTSHLN-IHNEEFQKRAKRQE----RRKQLLSKQKYADG   74 (88)
T ss_dssp             CCCSCCCCSCEECSSSCCEESSHHHHHHHHH-HHHHHHHHHCCCCS----CCCCCCCCCCCCCC
T ss_pred             cccccCCCCCCcCCCCCCEeCCHHHHHHHHH-HhCCCCCcccchhh----hHHHHHhhhccccc
Confidence            3457999999999999999999999999999 89999999998764    45566677777765

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.39  E-value=1.7e-07  Score=62.59  Aligned_cols=35  Identities=23%  Similarity=0.575  Sum_probs=17.8

Q ss_pred             cCCCCCCCCCCCcccCCchhHHHHHhhhcCCCCcc
Q psy5888         283 NKEKPFKCPLCDRCFGQQTNLDRHLKKHEADGPTI  317 (447)
Q Consensus       283 ~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~~  317 (447)
                      .++++|.|.+|++.|.....|..|+++|.++++|.
T Consensus         2 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   36 (39)
T 1njq_A            2 WPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARL   36 (39)
T ss_dssp             CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTT
T ss_pred             CCCCceECCCCCcccCCHHHHHHHHHHcCCCccce
Confidence            34445555555555555555555555555555444

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.36  E-value=2.1e-07  Score=61.08  Aligned_cols=35  Identities=40%  Similarity=0.726  Sum_probs=20.5

Q ss_pred             HhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcC
Q psy5888         277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEA  312 (447)
Q Consensus       277 H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~  312 (447)
                      |++ .|.++++|.|.+|++.|.+...|..|+++|.+
T Consensus         2 H~~-~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            2 STR-GSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSS-TTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCC-cCCCCCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            444 45566666666666666666666666665554

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.34  E-value=1.7e-07  Score=61.58  Aligned_cols=34  Identities=18%  Similarity=0.652  Sum_probs=22.4

Q ss_pred             hccCCCCCCCCCCCcccCCchhHHHHHhhhcCCC
Q psy5888         281 IHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADG  314 (447)
Q Consensus       281 ~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ek  314 (447)
                      +|.++++|.|.+|++.|.+...|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   36 (37)
T 2elo_A            3 SGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEV   36 (37)
T ss_dssp             CCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSC
T ss_pred             CCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCC
Confidence            4666666666666666666666666666666654

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.33  E-value=1.5e-07  Score=61.79  Aligned_cols=36  Identities=39%  Similarity=0.645  Sum_probs=29.9

Q ss_pred             HHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCC
Q psy5888         249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKE  285 (447)
Q Consensus       249 H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~  285 (447)
                      |+++|+++++|.|.+|++.|.....|.+|++ +|.++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~-~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRK-RHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHG-GGTCC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHH-HhccC
Confidence            6678888888888888888888888888887 67653

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.32  E-value=3.3e-07  Score=70.36  Aligned_cols=33  Identities=27%  Similarity=0.471  Sum_probs=15.8

Q ss_pred             CCccCCC--CCCccCChHHHHHHH-HHhcCCCcccC
Q psy5888         229 DRYACKF--CGKVFPRSANLTRHL-RTHTGEQPYKC  261 (447)
Q Consensus       229 k~~~C~~--Cgk~F~~~~~L~~H~-r~H~~ekp~~C  261 (447)
                      ++|+|.+  |++.|.+..+|.+|+ ++|+++|||.|
T Consensus        26 KPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~   61 (73)
T 1x3c_A           26 RPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFS   61 (73)
T ss_dssp             CSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCC
T ss_pred             CCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccc
Confidence            4445533  555555555555554 34444444444

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.31  E-value=3.6e-07  Score=70.20  Aligned_cols=38  Identities=29%  Similarity=0.492  Sum_probs=21.2

Q ss_pred             ccCCCCCCCCC--CCcccCCchhHHHHH-hhhcCCCCcccC
Q psy5888         282 HNKEKPFKCPL--CDRCFGQQTNLDRHL-KKHEADGPTILD  319 (447)
Q Consensus       282 H~~~kp~~C~~--C~k~F~~~~~L~~Hl-r~H~~ekp~~C~  319 (447)
                      ++++|||+|.+  |++.|.+...|.+|+ ++|+++|||.|-
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~   62 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSA   62 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCC
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccc
Confidence            44555555543  566665555565554 345555555553

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.31  E-value=2.9e-07  Score=59.45  Aligned_cols=33  Identities=18%  Similarity=0.445  Sum_probs=19.4

Q ss_pred             ccCCCCCCCCCCCcccCCchhHHHHHhhhcCCC
Q psy5888         282 HNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADG  314 (447)
Q Consensus       282 H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ek  314 (447)
                      |.++++|.|.+|++.|.+...|..|+++|++++
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~k   34 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAA   34 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTT
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCC
Confidence            455556666666666666666666666655544

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.29  E-value=5.5e-07  Score=58.01  Aligned_cols=31  Identities=32%  Similarity=0.575  Sum_probs=21.4

Q ss_pred             CccCCCCCCccCChHHHHHHHHHhcCCCccc
Q psy5888         230 RYACKFCGKVFPRSANLTRHLRTHTGEQPYK  260 (447)
Q Consensus       230 ~~~C~~Cgk~F~~~~~L~~H~r~H~~ekp~~  260 (447)
                      +|.|.+|++.|.....|..|+++|+++++|.
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             cccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            4667777777777777777777777766654

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.29  E-value=3.6e-07  Score=59.17  Aligned_cols=33  Identities=33%  Similarity=0.657  Sum_probs=17.7

Q ss_pred             ccCCCCCCCCCCCcccCCchhHHHHHhhhcCCC
Q psy5888         282 HNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADG  314 (447)
Q Consensus       282 H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ek  314 (447)
                      |.++++|.|.+|++.|.....|..|+++|++++
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~   34 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCC
Confidence            445555555555555555555555555555443

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.25  E-value=2.1e-07  Score=61.17  Aligned_cols=34  Identities=26%  Similarity=0.624  Sum_probs=21.4

Q ss_pred             HhcCCCcccCCCCCCcccchhhHHHHhhhhccCCC
Q psy5888         252 THTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEK  286 (447)
Q Consensus       252 ~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~k  286 (447)
                      +|+++++|.|.+|++.|.....|..|++ +|.+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~-~h~~~k   36 (37)
T 2elo_A            3 SGSSGRSYSCPVCEKSFSEDRLIKSHIK-TNHPEV   36 (37)
T ss_dssp             CCCCCCCCEETTTTEECSSHHHHHHHHH-HHCSSC
T ss_pred             CCCCCCCcCCCCCCCccCCHHHHHHHHH-HHcCCC
Confidence            4566666666666666666666666666 566554

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.22  E-value=8.5e-07  Score=57.10  Aligned_cols=30  Identities=33%  Similarity=0.716  Sum_probs=16.8

Q ss_pred             CCCCCCCCcccCCchhHHHHHhhhcCCCCc
Q psy5888         287 PFKCPLCDRCFGQQTNLDRHLKKHEADGPT  316 (447)
Q Consensus       287 p~~C~~C~k~F~~~~~L~~Hlr~H~~ekp~  316 (447)
                      +|.|.+|++.|.....|..|+++|+++++|
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   31 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHITLHELLGEE   31 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTTTCCC
T ss_pred             cccCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            455555555555555555555555555554

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.20  E-value=7.2e-07  Score=57.70  Aligned_cols=33  Identities=27%  Similarity=0.798  Sum_probs=21.2

Q ss_pred             hcCCCcccCCCCCCcccchhhHHHHhhhhccCCC
Q psy5888         253 HTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEK  286 (447)
Q Consensus       253 H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~k  286 (447)
                      |+++++|.|.+|++.|.....|.+|++ +|.+++
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~-~H~~~~   34 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLK-VHTDTL   34 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHG-GGTSCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHH-HcCCCC
Confidence            556666666666666666666666666 566554

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.19  E-value=6.9e-07  Score=57.63  Aligned_cols=33  Identities=27%  Similarity=0.550  Sum_probs=18.0

Q ss_pred             hcCCCcccCCCCCCcccchhhHHHHhhhhccCCC
Q psy5888         253 HTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEK  286 (447)
Q Consensus       253 H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~k  286 (447)
                      |+++++|.|.+|++.|.....|.+|++ .|.+++
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~-~h~~~k   34 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIR-EVHGAA   34 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHH-HTSCTT
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHH-HHcCCC
Confidence            445555555555555555555555555 455443

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.16  E-value=9.3e-07  Score=57.45  Aligned_cols=33  Identities=36%  Similarity=0.760  Sum_probs=21.5

Q ss_pred             hccCCCCCCCCCCCcccCCchhHHHHHhhhcCC
Q psy5888         281 IHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEAD  313 (447)
Q Consensus       281 ~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~e  313 (447)
                      .|.++++|.|.+|++.|.....|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            456666666666666666666666666666654

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.15  E-value=1.4e-06  Score=56.59  Aligned_cols=34  Identities=29%  Similarity=0.528  Sum_probs=23.4

Q ss_pred             hccCCCCCCCCCCCcccCCchhHHHHHhhhcCCC
Q psy5888         281 IHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADG  314 (447)
Q Consensus       281 ~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ek  314 (447)
                      .|.++++|.|.+|++.|.+...|..|+++|++++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            4666677777777777777777777777776553

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.11  E-value=1.3e-06  Score=57.36  Aligned_cols=33  Identities=33%  Similarity=0.682  Sum_probs=21.3

Q ss_pred             hccCCCCCCCCCCCcccCCc-hhHHHHHhhhcCC
Q psy5888         281 IHNKEKPFKCPLCDRCFGQQ-TNLDRHLKKHEAD  313 (447)
Q Consensus       281 ~H~~~kp~~C~~C~k~F~~~-~~L~~Hlr~H~~e  313 (447)
                      +|.++++|.|.+|++.|.+. ..|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            45666666666666666666 6666666666554

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.10  E-value=1.4e-06  Score=56.72  Aligned_cols=32  Identities=34%  Similarity=0.813  Sum_probs=18.9

Q ss_pred             ccCCCCCCCCCCCcccCCchhHHHHHhhhcCC
Q psy5888         282 HNKEKPFKCPLCDRCFGQQTNLDRHLKKHEAD  313 (447)
Q Consensus       282 H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~e  313 (447)
                      |.++++|.|.+|++.|.+...|..|+++|+++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            4 GSSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             SCCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            55555666666666666666666666655543

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.09  E-value=1.3e-06  Score=57.64  Aligned_cols=35  Identities=31%  Similarity=0.545  Sum_probs=18.5

Q ss_pred             ccCCCCCCCC--CCCcccCCchhHHHHHhhhcCCCCc
Q psy5888         282 HNKEKPFKCP--LCDRCFGQQTNLDRHLKKHEADGPT  316 (447)
Q Consensus       282 H~~~kp~~C~--~C~k~F~~~~~L~~Hlr~H~~ekp~  316 (447)
                      |.++++|.|.  .|++.|.+...|.+|+++|.++++|
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            3445555555  3555555555555555555555543

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.07  E-value=1.6e-06  Score=56.51  Aligned_cols=31  Identities=26%  Similarity=0.598  Sum_probs=16.1

Q ss_pred             ccCCCCCCCCCCCcccCCchhHHHHHhhhcC
Q psy5888         282 HNKEKPFKCPLCDRCFGQQTNLDRHLKKHEA  312 (447)
Q Consensus       282 H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~  312 (447)
                      |.++++|.|.+|++.|.+...|..|+++|++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elv_A            4 GSSGLLYDCHICERKFKNELDRDRHMLVHGD   34 (36)
T ss_dssp             SCCCCCEECSSSCCEESSHHHHHHHHTTTST
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHHHHhcC
Confidence            4445555555555555555555555555544

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.04  E-value=2.1e-06  Score=58.01  Aligned_cols=31  Identities=35%  Similarity=0.576  Sum_probs=17.9

Q ss_pred             ccCCCCCCCCC--CCcccCCchhHHHHHhhhcC
Q psy5888         282 HNKEKPFKCPL--CDRCFGQQTNLDRHLKKHEA  312 (447)
Q Consensus       282 H~~~kp~~C~~--C~k~F~~~~~L~~Hlr~H~~  312 (447)
                      |.+++||+|.+  |++.|.+...|.+|+++|++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg   36 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTA   36 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            44555666654  66666666666666665554

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.03  E-value=2.5e-06  Score=55.54  Aligned_cols=32  Identities=28%  Similarity=0.651  Sum_probs=19.6

Q ss_pred             ccCCCCCCCCCCCcccCCchhHHHHHhhhcCC
Q psy5888         282 HNKEKPFKCPLCDRCFGQQTNLDRHLKKHEAD  313 (447)
Q Consensus       282 H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~e  313 (447)
                      |.++++|.|.+|++.|.+...|..|+++|.++
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            45556666666666666666666666666554

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.02  E-value=1.5e-06  Score=57.00  Aligned_cols=33  Identities=33%  Similarity=0.653  Sum_probs=19.3

Q ss_pred             HhcCCCcccCCCCCCcccch-hhHHHHhhhhccCC
Q psy5888         252 THTGEQPYKCKYCERSFSIS-SNLQRHVRNIHNKE  285 (447)
Q Consensus       252 ~H~~ekp~~C~~C~k~F~s~-~~L~~H~~~~H~~~  285 (447)
                      +|.++++|.|.+|++.|... ..|.+|++ +|.++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~-~H~~~   36 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIW-AHEGV   36 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHH-HHHTC
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHH-hcCCC
Confidence            45555666666666666665 56666655 45543

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.01  E-value=1.9e-06  Score=60.63  Aligned_cols=33  Identities=24%  Similarity=0.725  Sum_probs=20.5

Q ss_pred             ccCCCCCCCCCCCcccCCchhHHHHHh-hhcCCC
Q psy5888         282 HNKEKPFKCPLCDRCFGQQTNLDRHLK-KHEADG  314 (447)
Q Consensus       282 H~~~kp~~C~~C~k~F~~~~~L~~Hlr-~H~~ek  314 (447)
                      |+++++|.|.+|++.|.+...|..|++ +|.++.
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~   35 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEE   35 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC--
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCC
Confidence            566666666666666666666666666 665543

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.01  E-value=2e-06  Score=55.99  Aligned_cols=32  Identities=28%  Similarity=0.625  Sum_probs=18.5

Q ss_pred             hcCCCcccCCCCCCcccchhhHHHHhhhhccCC
Q psy5888         253 HTGEQPYKCKYCERSFSISSNLQRHVRNIHNKE  285 (447)
Q Consensus       253 H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~  285 (447)
                      |.++++|.|.+|++.|.....|.+|++ +|+++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~-~H~~~   35 (36)
T 2elv_A            4 GSSGLLYDCHICERKFKNELDRDRHML-VHGDK   35 (36)
T ss_dssp             SCCCCCEECSSSCCEESSHHHHHHHHT-TTSTT
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHHH-HhcCC
Confidence            455556666666666666666666655 45543

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.01  E-value=2.1e-06  Score=55.92  Aligned_cols=32  Identities=34%  Similarity=0.688  Sum_probs=17.2

Q ss_pred             hcCCCcccCCCCCCcccchhhHHHHhhhhccCC
Q psy5888         253 HTGEQPYKCKYCERSFSISSNLQRHVRNIHNKE  285 (447)
Q Consensus       253 H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~  285 (447)
                      |.++++|.|.+|++.|.....|..|++ +|.++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~-~H~~~   35 (36)
T 2elq_A            4 GSSGKPFKCSLCEYATRSKSNLKAHMN-RHSTE   35 (36)
T ss_dssp             SCCCCSEECSSSSCEESCHHHHHHHHH-HSSTT
T ss_pred             CCCCCCccCCCCCchhCCHHHHHHHHH-HhccC
Confidence            445555555555555555555555555 45443

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.01  E-value=1.1e-06  Score=57.91  Aligned_cols=30  Identities=23%  Similarity=0.472  Sum_probs=13.8

Q ss_pred             ccCCCCCCCCCCCcccCCchhHHHH-Hhhhc
Q psy5888         282 HNKEKPFKCPLCDRCFGQQTNLDRH-LKKHE  311 (447)
Q Consensus       282 H~~~kp~~C~~C~k~F~~~~~L~~H-lr~H~  311 (447)
                      |.++++|.|..|++.|.+...|..| ++.|.
T Consensus         4 H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~   34 (37)
T 2elm_A            4 GSSGHLYYCSQCHYSSITKNCLKRHVIQKHS   34 (37)
T ss_dssp             SSSSCEEECSSSSCEEECHHHHHHHHHHHTC
T ss_pred             cCCCcCeECCCCCcccCCHHHHHHHHHHHcc
Confidence            4444444444444444444444444 44443

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.01  E-value=2.3e-06  Score=55.54  Aligned_cols=28  Identities=46%  Similarity=0.745  Sum_probs=13.6

Q ss_pred             CCccCCCCCCccCChHHHHHHHHHhcCC
Q psy5888         229 DRYACKFCGKVFPRSANLTRHLRTHTGE  256 (447)
Q Consensus       229 k~~~C~~Cgk~F~~~~~L~~H~r~H~~e  256 (447)
                      ++|.|.+|++.|.....|..|+++|+++
T Consensus         8 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            8 KPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            3445555555555555555555444443

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.00  E-value=1.7e-06  Score=57.08  Aligned_cols=34  Identities=24%  Similarity=0.447  Sum_probs=30.5

Q ss_pred             HHhcCCCcccCCCCCCcccchhhHHHH-hhhhccCC
Q psy5888         251 RTHTGEQPYKCKYCERSFSISSNLQRH-VRNIHNKE  285 (447)
Q Consensus       251 r~H~~ekp~~C~~C~k~F~s~~~L~~H-~~~~H~~~  285 (447)
                      ++|+++++|.|..|++.|.....|.+| ++ +|.++
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-~H~~~   36 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQ-KHSNI   36 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHH-HTCCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHH-HccCc
Confidence            578999999999999999999999999 77 78764

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.98  E-value=2.7e-06  Score=56.03  Aligned_cols=34  Identities=24%  Similarity=0.568  Sum_probs=16.0

Q ss_pred             cCCCcccCC--CCCCcccchhhHHHHhhhhccCCCCC
Q psy5888         254 TGEQPYKCK--YCERSFSISSNLQRHVRNIHNKEKPF  288 (447)
Q Consensus       254 ~~ekp~~C~--~C~k~F~s~~~L~~H~~~~H~~~kp~  288 (447)
                      +++++|.|.  .|++.|.+...|.+|++ +|.++++|
T Consensus         2 ~~~k~~~C~~~~C~k~f~~~~~L~~H~~-~H~~~k~~   37 (38)
T 1bhi_A            2 SDDKPFLCTAPGCGQRFTNEDHLAVHKH-KHEMTLKF   37 (38)
T ss_dssp             TTCCCEECCCTTTCCEESSHHHHHHHHH-HHHTTTTT
T ss_pred             CCCcceECCCCCCCcccCCHHHHHHHHH-HhCCCCCC
Confidence            344445554  25555555555555544 44444443

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.97  E-value=3.7e-06  Score=54.50  Aligned_cols=28  Identities=32%  Similarity=0.636  Sum_probs=15.1

Q ss_pred             CCccCCCCCCccCChHHHHHHHHHhcCC
Q psy5888         229 DRYACKFCGKVFPRSANLTRHLRTHTGE  256 (447)
Q Consensus       229 k~~~C~~Cgk~F~~~~~L~~H~r~H~~e  256 (447)
                      ++|.|.+|++.|.....|..|+++|+++
T Consensus         8 ~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            8 KTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             SSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            4455555555555555555555555543

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.96  E-value=3.5e-06  Score=56.89  Aligned_cols=29  Identities=28%  Similarity=0.413  Sum_probs=16.5

Q ss_pred             CCCccCCC--CCCccCChHHHHHHHHHhcCC
Q psy5888         228 KDRYACKF--CGKVFPRSANLTRHLRTHTGE  256 (447)
Q Consensus       228 ~k~~~C~~--Cgk~F~~~~~L~~H~r~H~~e  256 (447)
                      +++|.|.+  |++.|.+...|.+|+++|+++
T Consensus         7 ekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            7 GILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            34556654  666666666666666655543

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=97.93  E-value=3.7e-06  Score=59.09  Aligned_cols=33  Identities=24%  Similarity=0.590  Sum_probs=20.4

Q ss_pred             hcCCCcccCCCCCCcccchhhHHHHhhhhccCC
Q psy5888         253 HTGEQPYKCKYCERSFSISSNLQRHVRNIHNKE  285 (447)
Q Consensus       253 H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~  285 (447)
                      |+++++|.|.+|++.|.....|.+|++.+|.++
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e   34 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHLAE   34 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC-
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcCCC
Confidence            566666666666666666666666665346554

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.91  E-value=2.5e-06  Score=59.62  Aligned_cols=38  Identities=24%  Similarity=0.490  Sum_probs=27.2

Q ss_pred             HHhhhhccCCCCCCCC--CCCcccCCchhHHHHHhhhcCCC
Q psy5888         276 RHVRNIHNKEKPFKCP--LCDRCFGQQTNLDRHLKKHEADG  314 (447)
Q Consensus       276 ~H~~~~H~~~kp~~C~--~C~k~F~~~~~L~~Hlr~H~~ek  314 (447)
                      .|.. .|.++++|.|.  .|++.|.+...|..|+++|++++
T Consensus         8 ~~~~-~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            8 DKYV-KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGSC-EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHh-ccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            3444 57777788885  58888888888888887777653

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=97.91  E-value=3.6e-06  Score=56.23  Aligned_cols=26  Identities=27%  Similarity=0.496  Sum_probs=16.2

Q ss_pred             ccCCCCCCCCCCCcccCCchhHHHHH
Q psy5888         282 HNKEKPFKCPLCDRCFGQQTNLDRHL  307 (447)
Q Consensus       282 H~~~kp~~C~~C~k~F~~~~~L~~Hl  307 (447)
                      +.+++||.|.+|++.|.+...|.+|+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC
Confidence            44566666666666666666666665

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.90  E-value=5.2e-06  Score=53.94  Aligned_cols=29  Identities=41%  Similarity=0.832  Sum_probs=17.8

Q ss_pred             CCCccCCCCCCccCChHHHHHHHHHhcCC
Q psy5888         228 KDRYACKFCGKVFPRSANLTRHLRTHTGE  256 (447)
Q Consensus       228 ~k~~~C~~Cgk~F~~~~~L~~H~r~H~~e  256 (447)
                      +++|.|.+|++.|.....|..|+++|+++
T Consensus         7 ~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            7 GKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            34566666666666666666666666554

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.88  E-value=1e-05  Score=49.34  Aligned_cols=27  Identities=41%  Similarity=0.961  Sum_probs=19.9

Q ss_pred             CccCCCCCCccCChHHHHHHHHHhcCC
Q psy5888         230 RYACKFCGKVFPRSANLTRHLRTHTGE  256 (447)
Q Consensus       230 ~~~C~~Cgk~F~~~~~L~~H~r~H~~e  256 (447)
                      +|.|.+|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            477777777777777777777777665

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=97.88  E-value=5.5e-06  Score=54.47  Aligned_cols=32  Identities=28%  Similarity=0.722  Sum_probs=18.9

Q ss_pred             ccCCCCCCCCC--CCcccCCchhHHHHHhhhcCC
Q psy5888         282 HNKEKPFKCPL--CDRCFGQQTNLDRHLKKHEAD  313 (447)
Q Consensus       282 H~~~kp~~C~~--C~k~F~~~~~L~~Hlr~H~~e  313 (447)
                      |.++++|.|.+  |++.|.+...|..|+++|.++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            45556666653  666666666666666666554

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=97.87  E-value=2.3e-06  Score=54.49  Aligned_cols=30  Identities=20%  Similarity=0.485  Sum_probs=18.5

Q ss_pred             cccCCCCCCcccchhhHHHHhhhhccCCCCC
Q psy5888         258 PYKCKYCERSFSISSNLQRHVRNIHNKEKPF  288 (447)
Q Consensus       258 p~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~  288 (447)
                      +|.|.+|++.|.....|.+|++ +|+++++|
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~~-~H~~~kp~   31 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHIK-TAFIVVAL   31 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSSTT-SSSSSSSC
T ss_pred             CCCCCCCCcccCCHHHHHHHHH-HHccCCCC
Confidence            5666666666666666666665 56666554

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=97.87  E-value=6.2e-07  Score=57.26  Aligned_cols=31  Identities=32%  Similarity=0.499  Sum_probs=29.1

Q ss_pred             CCccCCCCCCccCChHHHHHHHHHhcCCCcc
Q psy5888         229 DRYACKFCGKVFPRSANLTRHLRTHTGEQPY  259 (447)
Q Consensus       229 k~~~C~~Cgk~F~~~~~L~~H~r~H~~ekp~  259 (447)
                      ++|.|.+|++.|.....|..|+++|+++++|
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            4699999999999999999999999999886

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.86  E-value=8.8e-06  Score=49.91  Aligned_cols=28  Identities=36%  Similarity=0.899  Sum_probs=19.2

Q ss_pred             CCccCCCCCCccCChHHHHHHHHHhcCC
Q psy5888         229 DRYACKFCGKVFPRSANLTRHLRTHTGE  256 (447)
Q Consensus       229 k~~~C~~Cgk~F~~~~~L~~H~r~H~~e  256 (447)
                      ++|.|.+|++.|.....|..|+++|+++
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            4567777777777777777777776654

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=97.84  E-value=8e-06  Score=49.97  Aligned_cols=27  Identities=41%  Similarity=0.714  Sum_probs=17.0

Q ss_pred             CccCCCCCCccCChHHHHHHHHHhcCC
Q psy5888         230 RYACKFCGKVFPRSANLTRHLRTHTGE  256 (447)
Q Consensus       230 ~~~C~~Cgk~F~~~~~L~~H~r~H~~e  256 (447)
                      +|.|.+|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            466666666666666666666666554

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.84  E-value=1.1e-05  Score=49.17  Aligned_cols=27  Identities=37%  Similarity=0.917  Sum_probs=16.9

Q ss_pred             CCCCCCCCcccCCchhHHHHHhhhcCC
Q psy5888         287 PFKCPLCDRCFGQQTNLDRHLKKHEAD  313 (447)
Q Consensus       287 p~~C~~C~k~F~~~~~L~~Hlr~H~~e  313 (447)
                      +|.|.+|++.|.+...|..|+++|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            466666666666666666666666554

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.83  E-value=1.4e-05  Score=60.75  Aligned_cols=29  Identities=31%  Similarity=0.598  Sum_probs=15.4

Q ss_pred             CCCccCCCCCCccCChHHHHHHHHHhcCC
Q psy5888         228 KDRYACKFCGKVFPRSANLTRHLRTHTGE  256 (447)
Q Consensus       228 ~k~~~C~~Cgk~F~~~~~L~~H~r~H~~e  256 (447)
                      +++|.|.+|++.|.+...|.+|+++|+++
T Consensus        11 ekpy~C~~CgK~F~~~s~L~~H~r~Htg~   39 (66)
T 2epp_A           11 AGILPCGLCGKVFTDANRLRQHEAQHGVT   39 (66)
T ss_dssp             CCCCCCTTTCCCCSCHHHHHHHHHHHTTT
T ss_pred             ccCcCCCCCCCccCCHHHHHhhhhhhCCC
Confidence            34555555555555555555555555543

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.82  E-value=1.8e-05  Score=60.16  Aligned_cols=33  Identities=21%  Similarity=0.487  Sum_probs=22.7

Q ss_pred             ccCCCCCCCCCCCcccCCchhHHHHHhhhcCCC
Q psy5888         282 HNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADG  314 (447)
Q Consensus       282 H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~ek  314 (447)
                      |.++++|.|.+|++.|.+...|.+|+++|++++
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc
Confidence            556677777777777777777777777776643

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.82  E-value=1e-05  Score=49.30  Aligned_cols=28  Identities=54%  Similarity=1.003  Sum_probs=20.8

Q ss_pred             CccCCCCCCccCChHHHHHHHHHhcCCC
Q psy5888         230 RYACKFCGKVFPRSANLTRHLRTHTGEQ  257 (447)
Q Consensus       230 ~~~C~~Cgk~F~~~~~L~~H~r~H~~ek  257 (447)
                      +|.|.+|++.|.....|..|+++|++++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            5777777777777777777777777653

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.82  E-value=1.3e-05  Score=49.05  Aligned_cols=28  Identities=29%  Similarity=0.675  Sum_probs=20.1

Q ss_pred             CccCCCCCCccCChHHHHHHHHHhcCCC
Q psy5888         230 RYACKFCGKVFPRSANLTRHLRTHTGEQ  257 (447)
Q Consensus       230 ~~~C~~Cgk~F~~~~~L~~H~r~H~~ek  257 (447)
                      +|.|.+|++.|.....|..|+++|++++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            4677777777777777777777776654

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.81  E-value=8.4e-06  Score=50.00  Aligned_cols=28  Identities=43%  Similarity=0.964  Sum_probs=14.8

Q ss_pred             CCCCCCCCCcccCCchhHHHHHhhhcCC
Q psy5888         286 KPFKCPLCDRCFGQQTNLDRHLKKHEAD  313 (447)
Q Consensus       286 kp~~C~~C~k~F~~~~~L~~Hlr~H~~e  313 (447)
                      ++|.|.+|++.|.....|..|+++|.++
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            3455555555555555555555555443

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.81  E-value=1.2e-05  Score=48.83  Aligned_cols=27  Identities=33%  Similarity=0.701  Sum_probs=19.4

Q ss_pred             CccCCCCCCccCChHHHHHHHHHhcCC
Q psy5888         230 RYACKFCGKVFPRSANLTRHLRTHTGE  256 (447)
Q Consensus       230 ~~~C~~Cgk~F~~~~~L~~H~r~H~~e  256 (447)
                      +|.|.+|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            467777777777777777777777665

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=97.81  E-value=9.3e-06  Score=49.65  Aligned_cols=27  Identities=33%  Similarity=0.694  Sum_probs=14.8

Q ss_pred             CCCCCCCCcccCCchhHHHHHhhhcCC
Q psy5888         287 PFKCPLCDRCFGQQTNLDRHLKKHEAD  313 (447)
Q Consensus       287 p~~C~~C~k~F~~~~~L~~Hlr~H~~e  313 (447)
                      +|.|.+|++.|.....|..|+++|.++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            455555555555555555555555543

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.80  E-value=1.3e-05  Score=48.71  Aligned_cols=28  Identities=57%  Similarity=0.902  Sum_probs=18.6

Q ss_pred             CCCCCCCCCcccCCchhHHHHHhhhcCC
Q psy5888         286 KPFKCPLCDRCFGQQTNLDRHLKKHEAD  313 (447)
Q Consensus       286 kp~~C~~C~k~F~~~~~L~~Hlr~H~~e  313 (447)
                      ++|.|.+|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            3566777777777666677776666654

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.80  E-value=1.6e-05  Score=48.73  Aligned_cols=28  Identities=21%  Similarity=0.585  Sum_probs=19.0

Q ss_pred             CCCCCCCCcccCCchhHHHHHhhhcCCC
Q psy5888         287 PFKCPLCDRCFGQQTNLDRHLKKHEADG  314 (447)
Q Consensus       287 p~~C~~C~k~F~~~~~L~~Hlr~H~~ek  314 (447)
                      +|.|.+|++.|.....|..|+++|++++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            5667777777777777777777666554

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=97.79  E-value=6e-06  Score=55.11  Aligned_cols=22  Identities=32%  Similarity=0.718  Sum_probs=11.2

Q ss_pred             CCccCCCCCCccCChHHHHHHH
Q psy5888         229 DRYACKFCGKVFPRSANLTRHL  250 (447)
Q Consensus       229 k~~~C~~Cgk~F~~~~~L~~H~  250 (447)
                      ++|.|.+|++.|.+.++|.+|+
T Consensus         7 kp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            7 ARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CCCEETTTTEECSCHHHHHHHH
T ss_pred             cCeECCCCCCccCCHhHccCcC
Confidence            4455555555555555555554

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=97.75  E-value=1.1e-05  Score=53.02  Aligned_cols=28  Identities=46%  Similarity=0.950  Sum_probs=14.1

Q ss_pred             CCccCCC--CCCccCChHHHHHHHHHhcCC
Q psy5888         229 DRYACKF--CGKVFPRSANLTRHLRTHTGE  256 (447)
Q Consensus       229 k~~~C~~--Cgk~F~~~~~L~~H~r~H~~e  256 (447)
                      ++|.|.+  |++.|.....|.+|+++|+++
T Consensus         7 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            7 KQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            3455543  555555555555555555443

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.75  E-value=2.6e-06  Score=59.49  Aligned_cols=38  Identities=16%  Similarity=0.512  Sum_probs=26.7

Q ss_pred             HHHHHhcCCCcccCC--CCCCcccchhhHHHHhhhhccCCC
Q psy5888         248 RHLRTHTGEQPYKCK--YCERSFSISSNLQRHVRNIHNKEK  286 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~--~C~k~F~s~~~L~~H~~~~H~~~k  286 (447)
                      .|+..|+++++|.|.  .|++.|.....|.+|++ +|++++
T Consensus         8 ~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~-~H~~ek   47 (47)
T 1ncs_A            8 DKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQ-THLEDR   47 (47)
T ss_dssp             GGSCEEETTTEEECCCTTCCCEECSSSSHHHHHH-HHTTTC
T ss_pred             HHHhccCCCCCeECCCCCCCCccCCHHHHHHHHH-HccCCC
Confidence            344557777777775  57877777777777777 677653

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.73  E-value=2.4e-05  Score=49.18  Aligned_cols=28  Identities=36%  Similarity=0.826  Sum_probs=16.5

Q ss_pred             CCCCCC--CCCcccCCchhHHHHHhhhcCC
Q psy5888         286 KPFKCP--LCDRCFGQQTNLDRHLKKHEAD  313 (447)
Q Consensus       286 kp~~C~--~C~k~F~~~~~L~~Hlr~H~~e  313 (447)
                      ++|.|.  .|++.|.+...|..|+++|+++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            455665  5666666666666666665544

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.71  E-value=1.3e-05  Score=48.77  Aligned_cols=27  Identities=41%  Similarity=0.870  Sum_probs=16.0

Q ss_pred             CCCCCCCCcccCCchhHHHHHhhhcCC
Q psy5888         287 PFKCPLCDRCFGQQTNLDRHLKKHEAD  313 (447)
Q Consensus       287 p~~C~~C~k~F~~~~~L~~Hlr~H~~e  313 (447)
                      +|.|.+|++.|.....|..|+++|.++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcCC
Confidence            455666666666666666666665544

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.71  E-value=2.6e-05  Score=48.96  Aligned_cols=28  Identities=36%  Similarity=0.764  Sum_probs=17.7

Q ss_pred             CCccCC--CCCCccCChHHHHHHHHHhcCC
Q psy5888         229 DRYACK--FCGKVFPRSANLTRHLRTHTGE  256 (447)
Q Consensus       229 k~~~C~--~Cgk~F~~~~~L~~H~r~H~~e  256 (447)
                      ++|.|.  .|++.|.....|..|+++|+++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            356666  5666666666666666666654

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.70  E-value=2.3e-05  Score=48.97  Aligned_cols=27  Identities=59%  Similarity=1.142  Sum_probs=17.5

Q ss_pred             CccCC--CCCCccCChHHHHHHHHHhcCC
Q psy5888         230 RYACK--FCGKVFPRSANLTRHLRTHTGE  256 (447)
Q Consensus       230 ~~~C~--~Cgk~F~~~~~L~~H~r~H~~e  256 (447)
                      +|.|.  .|++.|.....|..|+++|+++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            46665  5666666666666666666654

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.87  E-value=5.2e-06  Score=50.99  Aligned_cols=27  Identities=44%  Similarity=0.949  Sum_probs=17.3

Q ss_pred             CccCCCCCCccCChHHHHHHHHHhcCC
Q psy5888         230 RYACKFCGKVFPRSANLTRHLRTHTGE  256 (447)
Q Consensus       230 ~~~C~~Cgk~F~~~~~L~~H~r~H~~e  256 (447)
                      +|.|.+|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            466666666666666666666666554

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.66  E-value=2.2e-05  Score=47.15  Aligned_cols=25  Identities=36%  Similarity=0.860  Sum_probs=15.2

Q ss_pred             ccCCCCCCccCChHHHHHHHHHhcC
Q psy5888         231 YACKFCGKVFPRSANLTRHLRTHTG  255 (447)
Q Consensus       231 ~~C~~Cgk~F~~~~~L~~H~r~H~~  255 (447)
                      |.|.+|++.|.....|..|+++|++
T Consensus         2 ~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            2 YKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             ccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            5566666666666666666666554

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.66  E-value=2.7e-05  Score=48.62  Aligned_cols=27  Identities=33%  Similarity=0.874  Sum_probs=14.6

Q ss_pred             CCCCC--CCCcccCCchhHHHHHhhhcCC
Q psy5888         287 PFKCP--LCDRCFGQQTNLDRHLKKHEAD  313 (447)
Q Consensus       287 p~~C~--~C~k~F~~~~~L~~Hlr~H~~e  313 (447)
                      +|.|.  .|++.|.....|..|+++|+++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            45554  5555555555555555555543

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.66  E-value=2.4e-05  Score=47.21  Aligned_cols=25  Identities=32%  Similarity=0.720  Sum_probs=15.8

Q ss_pred             CCccCCCCCCccCChHHHHHHHHHh
Q psy5888         229 DRYACKFCGKVFPRSANLTRHLRTH  253 (447)
Q Consensus       229 k~~~C~~Cgk~F~~~~~L~~H~r~H  253 (447)
                      ++|.|..||+.|.....|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHc
Confidence            3566666666666666666666655

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.81  E-value=6.9e-06  Score=50.43  Aligned_cols=27  Identities=30%  Similarity=0.828  Sum_probs=14.7

Q ss_pred             CCCCCCCCcccCCchhHHHHHhhhcCC
Q psy5888         287 PFKCPLCDRCFGQQTNLDRHLKKHEAD  313 (447)
Q Consensus       287 p~~C~~C~k~F~~~~~L~~Hlr~H~~e  313 (447)
                      +|.|.+|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            455555555555555555555555443

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.64  E-value=1.8e-05  Score=48.00  Aligned_cols=23  Identities=35%  Similarity=0.973  Sum_probs=11.0

Q ss_pred             CcccCCCCCCcccchhhHHHHhh
Q psy5888         257 QPYKCKYCERSFSISSNLQRHVR  279 (447)
Q Consensus       257 kp~~C~~C~k~F~s~~~L~~H~~  279 (447)
                      ++|.|..|++.|.....|..|++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~   24 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYR   24 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHT
T ss_pred             cCccCCCCCcccCCHHHHHHHHH
Confidence            34444444444444444444444

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=96.81  E-value=7.1e-06  Score=50.53  Aligned_cols=27  Identities=37%  Similarity=0.828  Sum_probs=14.6

Q ss_pred             CCCCCCCCCcccCCchhHHHHHhhhcC
Q psy5888         286 KPFKCPLCDRCFGQQTNLDRHLKKHEA  312 (447)
Q Consensus       286 kp~~C~~C~k~F~~~~~L~~Hlr~H~~  312 (447)
                      ++|.|..|++.|.+...|..|+++|++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTG   28 (30)
Confidence            345555555555555555555555544

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.64  E-value=2.3e-05  Score=47.54  Aligned_cols=27  Identities=41%  Similarity=0.891  Sum_probs=25.0

Q ss_pred             CCccCCCCCCccCChHHHHHHHHHhcC
Q psy5888         229 DRYACKFCGKVFPRSANLTRHLRTHTG  255 (447)
Q Consensus       229 k~~~C~~Cgk~F~~~~~L~~H~r~H~~  255 (447)
                      ++|.|.+|++.|.....|..|+++|++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            579999999999999999999999864

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.63  E-value=2.1e-05  Score=47.49  Aligned_cols=25  Identities=36%  Similarity=0.852  Sum_probs=12.6

Q ss_pred             CCCCCCCCCcccCCchhHHHHHhhh
Q psy5888         286 KPFKCPLCDRCFGQQTNLDRHLKKH  310 (447)
Q Consensus       286 kp~~C~~C~k~F~~~~~L~~Hlr~H  310 (447)
                      ++|.|..|++.|.....|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHc
Confidence            3455555555555555555555444

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=96.77  E-value=8.5e-06  Score=50.17  Aligned_cols=27  Identities=44%  Similarity=0.924  Sum_probs=16.4

Q ss_pred             CccCCCCCCccCChHHHHHHHHHhcCC
Q psy5888         230 RYACKFCGKVFPRSANLTRHLRTHTGE  256 (447)
Q Consensus       230 ~~~C~~Cgk~F~~~~~L~~H~r~H~~e  256 (447)
                      +|.|.+|++.|.....|..|+++|+++
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            3 PYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            456666666666666666666666544

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.59  E-value=2.9e-05  Score=46.55  Aligned_cols=24  Identities=42%  Similarity=0.987  Sum_probs=12.2

Q ss_pred             CCCCCCCcccCCchhHHHHHhhhc
Q psy5888         288 FKCPLCDRCFGQQTNLDRHLKKHE  311 (447)
Q Consensus       288 ~~C~~C~k~F~~~~~L~~Hlr~H~  311 (447)
                      |.|.+|++.|.+...|..|+++|+
T Consensus         2 ~~C~~C~k~f~~~~~l~~H~~~h~   25 (27)
T 1znf_A            2 YKCGLCERSFVEKSALSRHQRVHK   25 (27)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             ccCCCCCCcCCCHHHHHHHHHHcC
Confidence            445555555555555555555444

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.57  E-value=2.1e-05  Score=47.73  Aligned_cols=24  Identities=33%  Similarity=0.755  Sum_probs=13.6

Q ss_pred             CccCCCCCCccCChHHHHHHHHHh
Q psy5888         230 RYACKFCGKVFPRSANLTRHLRTH  253 (447)
Q Consensus       230 ~~~C~~Cgk~F~~~~~L~~H~r~H  253 (447)
                      +|.|.+|++.|.....|..|+++|
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            3 PYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             TEEETTTTEEESCHHHHHHHHTTC
T ss_pred             CcCCCCCCcccCCHHHHHHHHHhc
Confidence            455555555555555555555554

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.57  E-value=1.8e-05  Score=48.01  Aligned_cols=23  Identities=30%  Similarity=0.803  Sum_probs=11.3

Q ss_pred             CcccCCCCCCcccchhhHHHHhh
Q psy5888         257 QPYKCKYCERSFSISSNLQRHVR  279 (447)
Q Consensus       257 kp~~C~~C~k~F~s~~~L~~H~~  279 (447)
                      ++|.|..|++.|.....|.+|++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~   24 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMR   24 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHT
T ss_pred             cCcCCCCCCcccCCHHHHHHHHH
Confidence            34455555555555555555544

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.56  E-value=3.7e-05  Score=47.22  Aligned_cols=26  Identities=38%  Similarity=0.779  Sum_probs=13.1

Q ss_pred             CCCCCCCCcccCCchhHHHH-HhhhcC
Q psy5888         287 PFKCPLCDRCFGQQTNLDRH-LKKHEA  312 (447)
Q Consensus       287 p~~C~~C~k~F~~~~~L~~H-lr~H~~  312 (447)
                      +|.|..|++.|.+...|..| +++|.+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~   28 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSG   28 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccC
Confidence            45555555555555555555 344444

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.56  E-value=3.3e-05  Score=47.50  Aligned_cols=27  Identities=41%  Similarity=0.920  Sum_probs=14.3

Q ss_pred             CccCCCCCCccCChHHHHHH-HHHhcCC
Q psy5888         230 RYACKFCGKVFPRSANLTRH-LRTHTGE  256 (447)
Q Consensus       230 ~~~C~~Cgk~F~~~~~L~~H-~r~H~~e  256 (447)
                      +|.|..|++.|.....|..| +++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccCC
Confidence            35555555555555555555 3455443

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.44  E-value=0.00016  Score=54.44  Aligned_cols=49  Identities=24%  Similarity=0.597  Sum_probs=29.1

Q ss_pred             ccCCC--CCCccCChHHHHHHHH-HhcCCC------cccCCC--CCCcccchhhHHHHhh
Q psy5888         231 YACKF--CGKVFPRSANLTRHLR-THTGEQ------PYKCKY--CERSFSISSNLQRHVR  279 (447)
Q Consensus       231 ~~C~~--Cgk~F~~~~~L~~H~r-~H~~ek------p~~C~~--C~k~F~s~~~L~~H~~  279 (447)
                      |.|.+  |++.|.+...|..|+. .|.+.+      .|.|..  |++.+.....|..|++
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir   61 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHIN   61 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHH
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcc
Confidence            34554  6777777777777763 565543      456653  6665555555666655

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.54  E-value=2.2e-05  Score=46.96  Aligned_cols=24  Identities=46%  Similarity=0.980  Sum_probs=13.8

Q ss_pred             CccCCCCCCccCChHHHHHHHHHh
Q psy5888         230 RYACKFCGKVFPRSANLTRHLRTH  253 (447)
Q Consensus       230 ~~~C~~Cgk~F~~~~~L~~H~r~H  253 (447)
                      +|.|.+||+.|.....|..|+++|
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            355555666665555555555554

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.53  E-value=2.2e-05  Score=46.92  Aligned_cols=24  Identities=33%  Similarity=0.872  Sum_probs=12.2

Q ss_pred             CCCCCCCCcccCCchhHHHHHhhh
Q psy5888         287 PFKCPLCDRCFGQQTNLDRHLKKH  310 (447)
Q Consensus       287 p~~C~~C~k~F~~~~~L~~Hlr~H  310 (447)
                      +|.|.+|++.|.+...|..|+++|
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            445555555555555555555444

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.20  E-value=0.00035  Score=52.55  Aligned_cols=53  Identities=30%  Similarity=0.546  Sum_probs=44.6

Q ss_pred             ccCCC--CCCcccchhhHHHHhhhhccCCC------CCCCC--CCCcccCCchhHHHHHhhhc
Q psy5888         259 YKCKY--CERSFSISSNLQRHVRNIHNKEK------PFKCP--LCDRCFGQQTNLDRHLKKHE  311 (447)
Q Consensus       259 ~~C~~--C~k~F~s~~~L~~H~~~~H~~~k------p~~C~--~C~k~F~~~~~L~~Hlr~H~  311 (447)
                      |.|..  |++.|.+...|..|+...|.+.+      .|.|.  .|++.+.....|..|++..|
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            56776  99999999999999865788765      79997  59999999999999998753

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.17  E-value=0.00016  Score=43.80  Aligned_cols=25  Identities=40%  Similarity=0.856  Sum_probs=16.3

Q ss_pred             CccCC--CCCCccCChHHHHHHHHHhc
Q psy5888         230 RYACK--FCGKVFPRSANLTRHLRTHT  254 (447)
Q Consensus       230 ~~~C~--~Cgk~F~~~~~L~~H~r~H~  254 (447)
                      +|.|.  .|++.|.....|..|+++|+
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            46666  66666666666666666664

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.03  E-value=0.00021  Score=43.23  Aligned_cols=25  Identities=36%  Similarity=0.768  Sum_probs=12.7

Q ss_pred             CCCCC--CCCcccCCchhHHHHHhhhc
Q psy5888         287 PFKCP--LCDRCFGQQTNLDRHLKKHE  311 (447)
Q Consensus       287 p~~C~--~C~k~F~~~~~L~~Hlr~H~  311 (447)
                      +|.|.  .|++.|.....|..|+++|+
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            34455  55555555555555555443

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.44  E-value=0.00073  Score=57.93  Aligned_cols=76  Identities=18%  Similarity=0.392  Sum_probs=50.7

Q ss_pred             CCCccCCCCCCccCChHHHHHHH--HHhcCC-CcccCCCC------CCcccchhhHHHHhhhhccCCCCCCCCCCCcccC
Q psy5888         228 KDRYACKFCGKVFPRSANLTRHL--RTHTGE-QPYKCKYC------ERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFG  298 (447)
Q Consensus       228 ~k~~~C~~Cgk~F~~~~~L~~H~--r~H~~e-kp~~C~~C------~k~F~s~~~L~~H~~~~H~~~kp~~C~~C~k~F~  298 (447)
                      .+++.|.+|+..|.+...+..|.  +.|... +.|.+..+      ++.|...    .+.. .+.+.+.|.|.+|+..|.
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~C~~C~~~f~  104 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAA----PAEI-SDGEDRSKCCPVCNMTFS  104 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCC----SSCC-SSCCCTTTEETTTTEECS
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCC----cccc-ccCCCCCeEcCCCCCEeC
Confidence            45689999999999999999999  566532 33443211      2222221    1222 455666788888888888


Q ss_pred             CchhHHHHHh
Q psy5888         299 QQTNLDRHLK  308 (447)
Q Consensus       299 ~~~~L~~Hlr  308 (447)
                      +...|..|+.
T Consensus       105 s~~~~~~H~~  114 (127)
T 1zu1_A          105 SPVVAESHYI  114 (127)
T ss_dssp             SHHHHHHHHT
T ss_pred             CHHHHHHHHC
Confidence            8888888864

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=94.47  E-value=0.0089  Score=50.82  Aligned_cols=28  Identities=36%  Similarity=0.568  Sum_probs=21.6

Q ss_pred             HhcCCCcccCCCCCCcccchhhHHHHhh
Q psy5888         252 THTGEQPYKCKYCERSFSISSNLQRHVR  279 (447)
Q Consensus       252 ~H~~ekp~~C~~C~k~F~s~~~L~~H~~  279 (447)
                      .|+|+++|.|..|++.|.+...|..|++
T Consensus        44 d~tGekpfyC~~C~K~F~~~~~L~~H~r   71 (124)
T 1zr9_A           44 DLPGGGLHRCLACARYFIDSTNLKTHFR   71 (124)
T ss_dssp             SSGGGGCSEETTTTEECSSHHHHHHHTT
T ss_pred             cCCCCcceEcccCcchhCCHHHHHHHHh
Confidence            4677777888888888888888877776

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=94.37  E-value=0.0091  Score=50.76  Aligned_cols=29  Identities=28%  Similarity=0.450  Sum_probs=26.3

Q ss_pred             hccCCCCCCCCCCCcccCCchhHHHHHhh
Q psy5888         281 IHNKEKPFKCPLCDRCFGQQTNLDRHLKK  309 (447)
Q Consensus       281 ~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~  309 (447)
                      -|+|+++|.|..|++.|.+...|..|++.
T Consensus        44 d~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           44 DLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             cCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            68899999999999999999999999865

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=94.31  E-value=0.02  Score=48.90  Aligned_cols=21  Identities=0%  Similarity=-0.246  Sum_probs=17.7

Q ss_pred             hhccccccccCChhHHHHHHH
Q psy5888         350 EIRSFMGKVSADGNRLVQRVS  370 (447)
Q Consensus       350 ~~c~~Cgk~f~~~~~L~~H~~  370 (447)
                      ..|.+|++.|.+...|..|..
T Consensus        94 ~~C~~C~~~f~s~~~~~~H~~  114 (127)
T 1zu1_A           94 KCCPVCNMTFSSPVVAESHYI  114 (127)
T ss_dssp             TEETTTTEECSSHHHHHHHHT
T ss_pred             eEcCCCCCEeCCHHHHHHHHC
Confidence            357999999999999999875

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=93.36  E-value=0.037  Score=49.16  Aligned_cols=73  Identities=11%  Similarity=-0.072  Sum_probs=33.7

Q ss_pred             CCC--CCCCcccCCchhHHHHHhhhcCCCCcccCCCCCCCCChhhhhhccCCCCCCCCCCCchhhhccccccccCChhHH
Q psy5888         288 FKC--PLCDRCFGQQTNLDRHLKKHEADGPTILDDRNGGIPSPSMIHNRCRPPSGILNDDSYFEEIRSFMGKVSADGNRL  365 (447)
Q Consensus       288 ~~C--~~C~k~F~~~~~L~~Hlr~H~~ekp~~C~~C~k~f~s~~~l~~H~~~h~~~~~~~~~~~~~c~~Cgk~f~~~~~L  365 (447)
                      ..|  ..|+..+. ...|..|++ .-...++.|..|+..+ ....|..|+...-      ......|.+|+..+.. ..|
T Consensus        83 v~C~n~GC~~~~~-~~~l~~H~~-~C~~~~v~C~~C~~~~-~r~~l~~H~~~~C------~~r~~~C~~C~~~~~~-~~l  152 (170)
T 3hcs_A           83 VKCPNEGCLHKME-LRHLEDHQA-HCEFALMDCPQCQRPF-QKFHINIHILKDC------PRRQVSCDNCAASMAF-EDK  152 (170)
T ss_dssp             EECCSTTCCCEEE-GGGHHHHHT-TCTTSEEECTTTCCEE-EGGGHHHHHHHTC------TTCEEECTTTCCEEEG-GGH
T ss_pred             cCCCCCCCCceec-HhHHHHHHh-cCCceeeECCCCChHH-HHHHHHHHhhhhC------CCCCeECCCCCCccCH-HHH
Confidence            445  34555443 334555653 2233455666666655 3344555542111      1112244666665543 355


Q ss_pred             HHHHH
Q psy5888         366 VQRVS  370 (447)
Q Consensus       366 ~~H~~  370 (447)
                      ..|..
T Consensus       153 ~~H~~  157 (170)
T 3hcs_A          153 EIHDQ  157 (170)
T ss_dssp             HHHHT
T ss_pred             HhHHH
Confidence            66653

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=92.88  E-value=0.085  Score=46.76  Aligned_cols=104  Identities=15%  Similarity=0.224  Sum_probs=68.0

Q ss_pred             cCCCCCCccCChHHHH-HHHHHhcCCCcccCC--CCCCcccchhhHHHHhhhhccCCCCCCCCCCCcccCCchhHHHHHh
Q psy5888         232 ACKFCGKVFPRSANLT-RHLRTHTGEQPYKCK--YCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLK  308 (447)
Q Consensus       232 ~C~~Cgk~F~~~~~L~-~H~r~H~~ekp~~C~--~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr  308 (447)
                      .|+.|...+.....+. .-+..........|+  -|++.+. ...|..|+.  .-.-+++.|+.|+..+ .+..|..|+.
T Consensus        55 ~CP~Cr~~~~~~~~~~~~~~~~~i~~l~v~C~n~GC~~~~~-~~~l~~H~~--~C~~~~v~C~~C~~~~-~r~~l~~H~~  130 (170)
T 3hcs_A           55 KCPVDNEILLENQLFPDNFAKREILSLMVKCPNEGCLHKME-LRHLEDHQA--HCEFALMDCPQCQRPF-QKFHINIHIL  130 (170)
T ss_dssp             BCTTTCCBCCGGGCEECHHHHHHHHTSEEECCSTTCCCEEE-GGGHHHHHT--TCTTSEEECTTTCCEE-EGGGHHHHHH
T ss_pred             CCCCCccCcchhhhhhhHHHHHHHhhcccCCCCCCCCceec-HhHHHHHHh--cCCceeeECCCCChHH-HHHHHHHHhh
Confidence            8999988776531100 001111123556784  4877655 455778864  3344567899999887 5667889998


Q ss_pred             hhcCCCCcccCCCCCCCCChhhhhhccCCCCC
Q psy5888         309 KHEADGPTILDDRNGGIPSPSMIHNRCRPPSG  340 (447)
Q Consensus       309 ~H~~ekp~~C~~C~k~f~s~~~l~~H~~~h~~  340 (447)
                      ..-..+...|..|+..+. ...+..|...+.+
T Consensus       131 ~~C~~r~~~C~~C~~~~~-~~~l~~H~~~~~~  161 (170)
T 3hcs_A          131 KDCPRRQVSCDNCAASMA-FEDKEIHDQNCPL  161 (170)
T ss_dssp             HTCTTCEEECTTTCCEEE-GGGHHHHHTTCCC
T ss_pred             hhCCCCCeECCCCCCccC-HHHHHhHHHhCcC
Confidence            777788888999988774 3556788766654

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=92.69  E-value=0.071  Score=37.16  Aligned_cols=23  Identities=26%  Similarity=0.479  Sum_probs=16.8

Q ss_pred             CCCCCCCCCcccCCchhHHHHHh
Q psy5888         286 KPFKCPLCDRCFGQQTNLDRHLK  308 (447)
Q Consensus       286 kp~~C~~C~k~F~~~~~L~~Hlr  308 (447)
                      ..|.|+.|++.|.....|+.||+
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhh
Confidence            34777777777777777777776

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=91.64  E-value=0.17  Score=35.33  Aligned_cols=25  Identities=24%  Similarity=0.416  Sum_probs=20.4

Q ss_pred             CCccCCCCCCccCChHHHHHHHHHh
Q psy5888         229 DRYACKFCGKVFPRSANLTRHLRTH  253 (447)
Q Consensus       229 k~~~C~~Cgk~F~~~~~L~~H~r~H  253 (447)
                      .+|.|+-|++.|.....|+.||+.-
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmkyc   35 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYC   35 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhhhc
Confidence            4688888888888888888888743

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=86.78  E-value=0.36  Score=31.35  Aligned_cols=25  Identities=24%  Similarity=0.668  Sum_probs=14.4

Q ss_pred             ccCCCCCCcccchhhHHHHhhhhcc
Q psy5888         259 YKCKYCERSFSISSNLQRHVRNIHN  283 (447)
Q Consensus       259 ~~C~~C~k~F~s~~~L~~H~~~~H~  283 (447)
                      |.|++|.+.|.+...|..|....|.
T Consensus         6 FiCP~C~~~l~s~~~L~~Hye~~H~   30 (34)
T 3mjh_B            6 FICPQCMKSLGSADELFKHYEAVHD   30 (34)
T ss_dssp             EECTTTCCEESSHHHHHHHHHHHTS
T ss_pred             cCCcHHHHHcCCHHHHHHHHHhccc
Confidence            5566666666666666666554443

>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}

Probab=82.93  E-value=0.23  Score=37.75  Aligned_cols=39  Identities=23%  Similarity=0.545  Sum_probs=16.8

Q ss_pred             cccC-CCCCCcccchhhHHHHhhhhccCCCCCCCCCCCcccC
Q psy5888         258 PYKC-KYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFG  298 (447)
Q Consensus       258 p~~C-~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C~k~F~  298 (447)
                      +..| ..|+..+.+ ..|..|+. ..-..+...|.+|+..|.
T Consensus        16 ~v~C~~~C~~~v~r-~~l~~H~~-~~C~~r~v~C~~C~~~~~   55 (76)
T 2yuc_A           16 VIPCPNRCPMKLSR-RDLPAHLQ-HDCPKRRLKCEFCGCDFS   55 (76)
T ss_dssp             CCBCTTCCSCBCCS-SSSTTTTT-TSCTTSCCCCSSSCCCCC
T ss_pred             ccCCCccccHHhhH-hHHHhhCH-hhCCCcceECCCCCCccC
Confidence            3445 245544433 23444443 223334445555555443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	447
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	3e-13
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	2e-12
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	1e-04
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	3e-13
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	9e-08
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	3e-06
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	8e-13
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	3e-08
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	5e-12
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	1e-11
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	1e-11
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	2e-07
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	4e-07
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	3e-11
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	9e-07
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	1e-06
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	5e-11
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	6e-07
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	2e-05
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	2e-10
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	2e-09
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	7e-08
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	2e-09
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	3e-07
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	8e-05
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	1e-08
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	1e-06
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	3e-04
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	2e-08
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	9e-07
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	1e-05
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	4e-08
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	7e-05
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	0.003
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	1e-07
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	2e-05
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	2e-07
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	7e-06
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	4e-05
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	3e-07
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	4e-04
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	4e-04
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	4e-07
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	6e-05
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	0.003
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	6e-07
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	2e-05
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	0.004
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	6e-07
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	4e-04
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	9e-07
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	5e-06
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	1e-04
d1ubdc4	28	g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger	1e-05
d1ubdc4	28	g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger	5e-04
d1ubdc4	28	g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger	0.003
d2epra1	35	g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [	2e-04
d1ubdc2	28	g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger	7e-04
d1klra_	30	g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 96	7e-04
d2dmda2	26	g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {H	0.002
d2adra2	31	g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Sac	0.002
d1njqa_	37	g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale c	0.003

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.2 bits (149), Expect = 3e-13
 Identities = 13/39 (33%), Positives = 23/39 (58%)

Query: 254 TGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPL 292
           +  +PY C+ C + FS   +L  H++ +H  E+P KC +
Sbjct: 1   SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.9 bits (143), Expect = 2e-12
 Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 4/40 (10%)

Query: 224 TGKPKDRYACKFCGKVFPRSANLTRHLR-THTGEQPYKCK 262
            GKP   Y C+ CGK F R  +L  H++  HT E+P+KC+
Sbjct: 2   VGKP---YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ 38

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.9 bits (86), Expect = 1e-04
 Identities = 8/26 (30%), Positives = 15/26 (57%)

Query: 285 EKPFKCPLCDRCFGQQTNLDRHLKKH 310
            KP+ C  C + F +  +L+ H+K+ 
Sbjct: 3   GKPYICQSCGKGFSRPDHLNGHIKQV 28

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.2 bits (149), Expect = 3e-13
 Identities = 13/35 (37%), Positives = 21/35 (60%)

Query: 251 RTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKE 285
           RTH+GE+PY+C  C   F+ S  ++ H+   H + 
Sbjct: 1   RTHSGEKPYECYICHARFTQSGTMKMHILQKHTEN 35

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.7 bits (109), Expect = 9e-08
 Identities = 9/30 (30%), Positives = 16/30 (53%)

Query: 281 IHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
            H+ EKP++C +C   F Q   +  H+ + 
Sbjct: 2   THSGEKPYECYICHARFTQSGTMKMHILQK 31

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.9 bits (99), Expect = 3e-06
 Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 5/35 (14%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRH-LRTHTGE 256
           +G KP   Y C  C   F +S  +  H L+ HT  
Sbjct: 4   SGEKP---YECYICHARFTQSGTMKMHILQKHTEN 35

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.1 bits (146), Expect = 8e-13
 Identities = 10/35 (28%), Positives = 19/35 (54%), Gaps = 2/35 (5%)

Query: 231 YACK--FCGKVFPRSANLTRHLRTHTGEQPYKCKY 263
           ++C    CGK F    +L  H++ H+  + Y C++
Sbjct: 2   FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF 36

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.4 bits (113), Expect = 3e-08
 Identities = 8/34 (23%), Positives = 19/34 (55%), Gaps = 3/34 (8%)

Query: 259 YKCKY--CERSFSISSNLQRHVRNIHNKEKPFKC 290
           + C    C +SF+   +L+ H++ +H+  + + C
Sbjct: 2   FSCPEPACGKSFNFKKHLKEHMK-LHSDTRDYIC 34

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.5 bits (141), Expect = 5e-12
 Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 2/52 (3%)

Query: 231 YACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIH 282
           Y C+ CGK F   +   RH+  H G +PY C  C + F +  +L  H++ IH
Sbjct: 4   YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK-IH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.4 bits (138), Expect = 1e-11
 Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 2/55 (3%)

Query: 256 EQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
           ++ Y C+ C +SF+  S   RH+       +P+ C +C + F  + +L  H+K H
Sbjct: 1   DKLYPCQ-CGKSFTHKSQRDRHMSMHLGL-RPYGCGVCGKKFKMKHHLVGHMKIH 53

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.0 bits (138), Expect = 1e-11
 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)

Query: 251 RTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEK 286
           RTHTGE+PY C +C+++F     L  H +  ++   
Sbjct: 1   RTHTGEKPYACSHCDKTFRQKQLLDMHFK-RYHDPN 35

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.7 bits (106), Expect = 2e-07
 Identities = 13/30 (43%), Positives = 18/30 (60%)

Query: 281 IHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
            H  EKP+ C  CD+ F Q+  LD H K++
Sbjct: 2   THTGEKPYACSHCDKTFRQKQLLDMHFKRY 31

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.9 bits (104), Expect = 4e-07
 Identities = 8/26 (30%), Positives = 11/26 (42%)

Query: 231 YACKFCGKVFPRSANLTRHLRTHTGE 256
           YAC  C K F +   L  H + +   
Sbjct: 9   YACSHCDKTFRQKQLLDMHFKRYHDP 34

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.9 bits (135), Expect = 3e-11
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)

Query: 248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKE 285
           R        + YKC  C +SFS SS+L +H R  H  E
Sbjct: 2   RSEWQQRERRRYKCDECGKSFSHSSDLSKHRR-THTGE 38

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.2 bits (102), Expect = 9e-07
 Identities = 8/35 (22%), Positives = 16/35 (45%), Gaps = 1/35 (2%)

Query: 276 RHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
           R       + + +KC  C + F   ++L +H + H
Sbjct: 2   RSEW-QQRERRRYKCDECGKSFSHSSDLSKHRRTH 35

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.8 bits (101), Expect = 1e-06
 Identities = 15/26 (57%), Positives = 19/26 (73%)

Query: 231 YACKFCGKVFPRSANLTRHLRTHTGE 256
           Y C  CGK F  S++L++H RTHTGE
Sbjct: 13  YKCDECGKSFSHSSDLSKHRRTHTGE 38

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 55.1 bits (133), Expect = 5e-11
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)

Query: 249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIH 282
             R  TG +P++C  C+RSFS S +L  H +  H
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRK-RH 34

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.6 bits (103), Expect = 6e-07
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)

Query: 277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
             R      KPF+CP CDR F +  +L  H K+H
Sbjct: 2   STR-GSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.3 bits (92), Expect = 2e-05
 Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 4/33 (12%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTG 255
           TG KP   + C  C + F RS +L  H + H  
Sbjct: 7   TGIKP---FQCPDCDRSFSRSDHLALHRKRHML 36

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.0 bits (128), Expect = 2e-10
 Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 1/33 (3%)

Query: 253 HTGEQPYKCKYCERSFSISSNLQRHVRNIHNKE 285
           H+GE+PY C  C ++FS SS L +H R +H  E
Sbjct: 2   HSGEKPYGCVECGKAFSRSSILVQHQR-VHTGE 33

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.7 bits (122), Expect = 2e-09
 Identities = 18/34 (52%), Positives = 21/34 (61%), Gaps = 4/34 (11%)

Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGE 256
           +G KP   Y C  CGK F RS+ L +H R HTGE
Sbjct: 3   SGEKP---YGCVECGKAFSRSSILVQHQRVHTGE 33

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.1 bits (110), Expect = 7e-08
 Identities = 11/30 (36%), Positives = 18/30 (60%)

Query: 281 IHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
           IH+ EKP+ C  C + F + + L +H + H
Sbjct: 1   IHSGEKPYGCVECGKAFSRSSILVQHQRVH 30

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 50.3 bits (121), Expect = 2e-09
 Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 3/31 (9%)

Query: 226 KPKDRYACKFCGKVFPRSANLTRHLRTHTGE 256
           +    + C+ C + F R  +L RH R+HT E
Sbjct: 1   RS---FVCEVCTRAFARQEHLKRHYRSHTNE 28

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 44.2 bits (105), Expect = 3e-07
 Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 1/29 (3%)

Query: 258 PYKCKYCERSFSISSNLQRHVRNIHNKEK 286
            + C+ C R+F+   +L+RH R  H  EK
Sbjct: 2   SFVCEVCTRAFARQEHLKRHYR-SHTNEK 29

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 37.2 bits (87), Expect = 8e-05
 Identities = 10/25 (40%), Positives = 15/25 (60%)

Query: 286 KPFKCPLCDRCFGQQTNLDRHLKKH 310
           + F C +C R F +Q +L RH + H
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSH 25

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.1 bits (115), Expect = 1e-08
 Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 3/31 (9%)

Query: 226 KPKDRYACKFCGKVFPRSANLTRHLRTHTGE 256
           K    +AC  C K F RS +L++H++TH  +
Sbjct: 1   KK---FACPECPKRFMRSDHLSKHIKTHQNK 28

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.7 bits (101), Expect = 1e-06
 Identities = 8/29 (27%), Positives = 15/29 (51%), Gaps = 1/29 (3%)

Query: 258 PYKCKYCERSFSISSNLQRHVRNIHNKEK 286
            + C  C + F  S +L +H++  H  +K
Sbjct: 2   KFACPECPKRFMRSDHLSKHIK-THQNKK 29

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.8 bits (83), Expect = 3e-04
 Identities = 10/25 (40%), Positives = 15/25 (60%)

Query: 286 KPFKCPLCDRCFGQQTNLDRHLKKH 310
           K F CP C + F +  +L +H+K H
Sbjct: 1   KKFACPECPKRFMRSDHLSKHIKTH 25

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 48.0 bits (115), Expect = 2e-08
 Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 3/30 (10%)

Query: 226 KPKDRYACKFCGKVFPRSANLTRHLRTHTG 255
           KP   + C+ C + F RS +LT H+RTHTG
Sbjct: 2   KP---FQCRICMRNFSRSDHLTTHIRTHTG 28

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.0 bits (102), Expect = 9e-07
 Identities = 11/27 (40%), Positives = 19/27 (70%), Gaps = 1/27 (3%)

Query: 256 EQPYKCKYCERSFSISSNLQRHVRNIH 282
           ++P++C+ C R+FS S +L  H+R  H
Sbjct: 1   QKPFQCRICMRNFSRSDHLTTHIR-TH 26

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.5 bits (93), Expect = 1e-05
 Identities = 10/26 (38%), Positives = 17/26 (65%)

Query: 285 EKPFKCPLCDRCFGQQTNLDRHLKKH 310
           +KPF+C +C R F +  +L  H++ H
Sbjct: 1   QKPFQCRICMRNFSRSDHLTTHIRTH 26

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.6 bits (111), Expect = 4e-08
 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 5/33 (15%)

Query: 226 KPKDRYACKF--CGKVFPRSANLTRHLRTHTGE 256
           KP   + C F  C K + R  NL  HLR+HTGE
Sbjct: 1   KP---HKCTFEGCRKSYSRLENLKTHLRSHTGE 30

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (88), Expect = 7e-05
 Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 3/30 (10%)

Query: 258 PYKCKY--CERSFSISSNLQRHVRNIHNKE 285
           P+KC +  C +S+S   NL+ H+R  H  E
Sbjct: 2   PHKCTFEGCRKSYSRLENLKTHLR-SHTGE 30

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.1 bits (76), Expect = 0.003
 Identities = 10/27 (37%), Positives = 14/27 (51%), Gaps = 2/27 (7%)

Query: 286 KPFKC--PLCDRCFGQQTNLDRHLKKH 310
           KP KC    C + + +  NL  HL+ H
Sbjct: 1   KPHKCTFEGCRKSYSRLENLKTHLRSH 27

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.4 bits (108), Expect = 1e-07
 Identities = 17/33 (51%), Positives = 20/33 (60%), Gaps = 5/33 (15%)

Query: 226 KPKDRYAC--KFCGKVFPRSANLTRHLRTHTGE 256
           +P   + C   +CGK F RS  L RH RTHTGE
Sbjct: 1   RP---FMCTWSYCGKRFTRSDELQRHKRTHTGE 30

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.2 bits (92), Expect = 2e-05
 Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 3/31 (9%)

Query: 258 PYKCKY--CERSFSISSNLQRHVRNIHNKEK 286
           P+ C +  C + F+ S  LQRH R  H  EK
Sbjct: 2   PFMCTWSYCGKRFTRSDELQRHKR-THTGEK 31

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 44.7 bits (106), Expect = 2e-07
 Identities = 9/30 (30%), Positives = 20/30 (66%), Gaps = 1/30 (3%)

Query: 253 HTGEQPYKCKYCERSFSISSNLQRHVRNIH 282
            +G++P+ C+ C  +F+  +N  RH++ +H
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLK-VH 30

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.5 bits (95), Expect = 7e-06
 Identities = 10/26 (38%), Positives = 13/26 (50%)

Query: 231 YACKFCGKVFPRSANLTRHLRTHTGE 256
           + C+ C   F   AN  RHL+ HT  
Sbjct: 8   FVCRICLSAFTTKANCARHLKVHTDT 33

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.6 bits (90), Expect = 4e-05
 Identities = 11/29 (37%), Positives = 16/29 (55%)

Query: 282 HNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
            + ++PF C +C   F  + N  RHLK H
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLKVH 30

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 44.5 bits (105), Expect = 3e-07
 Identities = 7/49 (14%), Positives = 27/49 (55%), Gaps = 5/49 (10%)

Query: 240 FPRSANLTRHLRTHTGEQPYKCKYCE--RSFSISSNLQRHVRNIHNKEK 286
            PR  ++ ++++    ++ ++C +    ++F    N++ H++  H +++
Sbjct: 2   LPRG-SIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQ-THLEDR 47

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.1 bits (83), Expect = 4e-04
 Identities = 8/41 (19%), Positives = 21/41 (51%), Gaps = 4/41 (9%)

Query: 272 SNLQRHVRNIHNKEKPFKCPLCD--RCFGQQTNLDRHLKKH 310
            ++ ++V+     +K F+C      + F ++ N+  H++ H
Sbjct: 5   GSIDKYVK--EMPDKTFECLFPGCTKTFKRRYNIRSHIQTH 43

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.1 bits (83), Expect = 4e-04
 Identities = 8/33 (24%), Positives = 12/33 (36%)

Query: 224 TGKPKDRYACKFCGKVFPRSANLTRHLRTHTGE 256
                       C K F R  N+  H++TH  +
Sbjct: 14  MPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED 46

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.8 bits (104), Expect = 4e-07
 Identities = 17/32 (53%), Positives = 21/32 (65%), Gaps = 5/32 (15%)

Query: 226 KPKDRYACKF--CGKVFPRSANLTRHLRTHTG 255
           +P   YAC    C + F RSA+LTRH+R HTG
Sbjct: 1   RP---YACPVESCDRRFSRSADLTRHIRIHTG 29

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.7 bits (88), Expect = 6e-05
 Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 3/27 (11%)

Query: 258 PYKCKY--CERSFSISSNLQRHVRNIH 282
           PY C    C+R FS S++L RH+R IH
Sbjct: 2   PYACPVESCDRRFSRSADLTRHIR-IH 27

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.1 bits (76), Expect = 0.003
 Identities = 10/27 (37%), Positives = 16/27 (59%), Gaps = 2/27 (7%)

Query: 286 KPFKC--PLCDRCFGQQTNLDRHLKKH 310
           +P+ C    CDR F +  +L RH++ H
Sbjct: 1   RPYACPVESCDRRFSRSADLTRHIRIH 27

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.3 bits (103), Expect = 6e-07
 Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 3/29 (10%)

Query: 226 KPKDRYACKFCGKVFPRSANLTRHLRTHT 254
           KP   Y C  CGK F +++ L  H R HT
Sbjct: 1   KP---YKCLECGKAFSQNSGLINHQRIHT 26

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.1 bits (92), Expect = 2e-05
 Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)

Query: 258 PYKCKYCERSFSISSNLQRHVRNIH 282
           PYKC  C ++FS +S L  H R IH
Sbjct: 2   PYKCLECGKAFSQNSGLINHQR-IH 25

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.6 bits (75), Expect = 0.004
 Identities = 10/25 (40%), Positives = 14/25 (56%)

Query: 286 KPFKCPLCDRCFGQQTNLDRHLKKH 310
           KP+KC  C + F Q + L  H + H
Sbjct: 1   KPYKCLECGKAFSQNSGLINHQRIH 25

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.5 bits (103), Expect = 6e-07
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 5/33 (15%)

Query: 226 KPKDRYACKF--CGKVFPRSANLTRHLRTHTGE 256
           KP   + C F  CGK F    NL  H+R HTG+
Sbjct: 1   KP---FQCTFEGCGKRFSLDFNLRTHVRIHTGD 30

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (82), Expect = 4e-04
 Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 3/30 (10%)

Query: 258 PYKCKY--CERSFSISSNLQRHVRNIHNKE 285
           P++C +  C + FS+  NL+ HVR IH  +
Sbjct: 2   PFQCTFEGCGKRFSLDFNLRTHVR-IHTGD 30

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 43.1 bits (102), Expect = 9e-07
 Identities = 10/28 (35%), Positives = 16/28 (57%), Gaps = 2/28 (7%)

Query: 231 YACKF--CGKVFPRSANLTRHLRTHTGE 256
           Y+C    C K F R+ +L RH ++H  +
Sbjct: 4   YSCDHPGCDKAFVRNHDLIRHKKSHQEK 31

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 40.8 bits (96), Expect = 5e-06
 Identities = 9/32 (28%), Positives = 20/32 (62%), Gaps = 3/32 (9%)

Query: 256 EQPYKCKY--CERSFSISSNLQRHVRNIHNKE 285
           ++PY C +  C+++F  + +L RH +  H ++
Sbjct: 1   DRPYSCDHPGCDKAFVRNHDLIRHKK-SHQEK 31

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.5 bits (85), Expect = 1e-04
 Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 2/28 (7%)

Query: 285 EKPFKC--PLCDRCFGQQTNLDRHLKKH 310
           ++P+ C  P CD+ F +  +L RH K H
Sbjct: 1   DRPYSCDHPGCDKAFVRNHDLIRHKKSH 28

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.6 bits (93), Expect = 1e-05
 Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 2/26 (7%)

Query: 231 YACKF--CGKVFPRSANLTRHLRTHT 254
           Y C F  C K F +S NL  H+ TH 
Sbjct: 3   YVCPFDGCNKKFAQSTNLKSHILTHA 28

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.0 bits (81), Expect = 5e-04
 Identities = 9/24 (37%), Positives = 15/24 (62%), Gaps = 2/24 (8%)

Query: 258 PYKCKY--CERSFSISSNLQRHVR 279
           PY C +  C + F+ S+NL+ H+ 
Sbjct: 2   PYVCPFDGCNKKFAQSTNLKSHIL 25

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.1 bits (76), Expect = 0.003
 Identities = 10/27 (37%), Positives = 15/27 (55%), Gaps = 2/27 (7%)

Query: 286 KPFKC--PLCDRCFGQQTNLDRHLKKH 310
           +P+ C    C++ F Q TNL  H+  H
Sbjct: 1   RPYVCPFDGCNKKFAQSTNLKSHILTH 27

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.2 bits (83), Expect = 2e-04
 Identities = 14/34 (41%), Positives = 23/34 (67%)

Query: 226 KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPY 259
           + + + AC+ CGK+F    +L RH  +H+GE+PY
Sbjct: 1   RTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPY 34

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.0 bits (80), Expect = 7e-04
 Identities = 13/26 (50%), Positives = 15/26 (57%)

Query: 231 YACKFCGKVFPRSANLTRHLRTHTGE 256
           + C  CGK F  S+ L RH   HTGE
Sbjct: 3   HVCAECGKAFVESSKLKRHQLVHTGE 28

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.7 bits (79), Expect = 7e-04
 Identities = 14/30 (46%), Positives = 22/30 (73%)

Query: 257 QPYKCKYCERSFSISSNLQRHVRNIHNKEK 286
           + Y+C+YCE   + SSNL+ H++  H+KEK
Sbjct: 1   KTYQCQYCEFRSADSSNLKTHIKTKHSKEK 30

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.1 bits (75), Expect = 0.002
 Identities = 12/25 (48%), Positives = 15/25 (60%)

Query: 231 YACKFCGKVFPRSANLTRHLRTHTG 255
           + C+ CGK F R   L  H+R HTG
Sbjct: 2   HKCEVCGKCFSRKDKLKTHMRCHTG 26

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 33.2 bits (76), Expect = 0.002
 Identities = 10/23 (43%), Positives = 15/23 (65%)

Query: 287 PFKCPLCDRCFGQQTNLDRHLKK 309
           P+ C LC+R F ++  L RH +K
Sbjct: 1   PYPCGLCNRAFTRRDLLIRHAQK 23

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 33.1 bits (76), Expect = 0.003
 Identities = 9/31 (29%), Positives = 14/31 (45%)

Query: 227 PKDRYACKFCGKVFPRSANLTRHLRTHTGEQ 257
           P   Y C FC + F  +  L  H+  H  ++
Sbjct: 2   PPRSYTCSFCKREFRSAQALGGHMNVHRRDR 32

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	447
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.43
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.42
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.96
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.91
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	98.88
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	98.83
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.82
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.74
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.72
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.72
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.72
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.68
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.67
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.66
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.66
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.65
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.61
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.61
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.6
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.59
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.57
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.56
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.54
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.53
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.47
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.4
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.34
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.3
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.28
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.28
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.26
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.26
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.19
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.17
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	97.99
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.98
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	97.92
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.89
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.84
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.84
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.82
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.82
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.79
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.71
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.69
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.5
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.43
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.32
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.31
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.14
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.11
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.07
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.96
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	96.82
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	96.77
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.73
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	96.64
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	96.63
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.55
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.55
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.54
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.47
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.46
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	96.34
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.29
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.17
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.13
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.03
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.02
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.95
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	95.92
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	95.91
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	95.91
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	95.82
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.81
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.43
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.28
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	95.02
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	94.92
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	94.8
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	94.57
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	94.54
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	94.16
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	94.01
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	93.73
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	93.48
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	93.25
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	92.99
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	92.91
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	92.83
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	92.69
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	92.44
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	91.4
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	91.14
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	90.73
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	90.6
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	90.03
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	89.91
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	89.84
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	89.02
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	88.44
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	88.03
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	87.18
d1y0jb1	36	U-shaped transcription factor, different fingers {	87.07
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	86.72
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	84.97
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	84.4
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	82.49
d1y0jb1	36	U-shaped transcription factor, different fingers {	81.22

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=3.7e-14  Score=102.29  Aligned_cols=52  Identities=37%  Similarity=0.893  Sum_probs=35.8

Q ss_pred             CCccCCCCCCccCChHHHHHHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhc
Q psy5888         229 DRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIH  282 (447)
Q Consensus       229 k~~~C~~Cgk~F~~~~~L~~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H  282 (447)
                      ++|.|+ ||+.|.....|..|+++|++++||.|.+|++.|.....|..|++ +|
T Consensus         2 K~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r-~H   53 (53)
T d2csha1           2 KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK-IH   53 (53)
T ss_dssp             CCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHT-TT
T ss_pred             cCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHh-cC
Confidence            566773 77777777777777777777777777777777777777777766 44

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=3.7e-14  Score=102.34  Aligned_cols=53  Identities=32%  Similarity=0.756  Sum_probs=48.0

Q ss_pred             CCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCCCCcccCCchhHHHHHhhh
Q psy5888         256 EQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH  310 (447)
Q Consensus       256 ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H  310 (447)
                      ||+|.|. ||+.|.....|..|++ +|+++++|.|.+||+.|.+...|..|+++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~-~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMS-MHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHH-HHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhh-ccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            6889995 9999999999999988 899999999999999999999999999887

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.96  E-value=1.8e-10  Score=76.91  Aligned_cols=34  Identities=44%  Similarity=0.968  Sum_probs=14.9

Q ss_pred             CCccCCCCCCccCChHHHHHHHH-HhcCCCcccCC
Q psy5888         229 DRYACKFCGKVFPRSANLTRHLR-THTGEQPYKCK  262 (447)
Q Consensus       229 k~~~C~~Cgk~F~~~~~L~~H~r-~H~~ekp~~C~  262 (447)
                      ++|.|.+||+.|.+..+|.+|++ +|+++|||+|.
T Consensus         4 Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           4 KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            34444444444444444444433 34444444443

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.91  E-value=2.9e-10  Score=75.84  Aligned_cols=38  Identities=34%  Similarity=0.881  Sum_probs=35.2

Q ss_pred             CCCcccCCCCCCcccchhhHHHHhhhhccCCCCCCCCC
Q psy5888         255 GEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPL  292 (447)
Q Consensus       255 ~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~~C~~  292 (447)
                      -+|||+|.+|++.|....+|.+|++.+|++++||+|.+
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            47999999999999999999999876899999999975

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.88  E-value=2.9e-10  Score=75.65  Aligned_cols=37  Identities=22%  Similarity=0.632  Sum_probs=24.7

Q ss_pred             HHhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhcCC
Q psy5888         276 RHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEAD  313 (447)
Q Consensus       276 ~H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~e  313 (447)
                      +|++ +|++++||.|.+||+.|.+.+.|..|+++|+||
T Consensus         2 rH~~-~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEW-QQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCS-CCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCc-ccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            4555 566667777777777777777777776666654

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.83  E-value=2.3e-10  Score=76.16  Aligned_cols=37  Identities=41%  Similarity=0.674  Sum_probs=33.1

Q ss_pred             HHHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccCC
Q psy5888         248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKE  285 (447)
Q Consensus       248 ~H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~  285 (447)
                      +|+++|+++|||.|.+|++.|...++|.+|++ +|+||
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r-~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRR-THTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHT-TTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCc-cCCCC
Confidence            47788999999999999999999999999998 89886

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.82  E-value=7.6e-10  Score=70.99  Aligned_cols=32  Identities=31%  Similarity=0.738  Sum_probs=18.1

Q ss_pred             ccCCCCCCCCCCCcccCCchhHHHHHhhhcCC
Q psy5888         282 HNKEKPFKCPLCDRCFGQQTNLDRHLKKHEAD  313 (447)
Q Consensus       282 H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~e  313 (447)
                      |+++|||.|.+||+.|.+...|..|+++|++|
T Consensus         2 HTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           2 HSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             cCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            55555555555555555555555555555543

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.74  E-value=2e-09  Score=69.04  Aligned_cols=33  Identities=48%  Similarity=0.890  Sum_probs=27.8

Q ss_pred             HhcCCCcccCCCCCCcccchhhHHHHhhhhccCC
Q psy5888         252 THTGEQPYKCKYCERSFSISSNLQRHVRNIHNKE  285 (447)
Q Consensus       252 ~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~  285 (447)
                      +|+|+|||+|.+|++.|...+.|..|++ +|+||
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r-~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQR-VHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHH-GGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhcc-ccCCC
Confidence            4788888888888888888888888888 78875

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.72  E-value=2.3e-09  Score=70.26  Aligned_cols=32  Identities=41%  Similarity=0.815  Sum_probs=19.8

Q ss_pred             hccCCCCCCCCCCCcccCCchhHHHHHhhhcC
Q psy5888         281 IHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEA  312 (447)
Q Consensus       281 ~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~~  312 (447)
                      +|+|++||+|.+|++.|.+...|..|+++|++
T Consensus         2 ~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~   33 (36)
T d1x6ha2           2 THTGEKPYACSHCDKTFRQKQLLDMHFKRYHD   33 (36)
T ss_dssp             TCCCCCCEECSSSSCEESSHHHHHHHHHHTTC
T ss_pred             CCCCCCCEECCCCCCCcCCHhHHHHhCcccCC
Confidence            46666666666666666666666666666654

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.72  E-value=2.6e-09  Score=70.51  Aligned_cols=34  Identities=41%  Similarity=0.759  Sum_probs=19.0

Q ss_pred             HhhhhccCCCCCCCCCCCcccCCchhHHHHHhhhc
Q psy5888         277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHE  311 (447)
Q Consensus       277 H~~~~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~  311 (447)
                      |.| +|+++|||+|.+|++.|.+...|..|+++|.
T Consensus         2 h~R-~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           2 STR-GSTGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CSS-TTCCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CCC-ccCCccCeEeCCCCCEecCHHHHHHHHhcCc
Confidence            344 4555555555555555555555555555553

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.72  E-value=1.6e-09  Score=71.59  Aligned_cols=35  Identities=40%  Similarity=0.681  Sum_probs=32.0

Q ss_pred             HHHHhcCCCcccCCCCCCcccchhhHHHHhhhhccC
Q psy5888         249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNK  284 (447)
Q Consensus       249 H~r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~  284 (447)
                      |.|+|+|||||+|.+|++.|.++.+|.+|++ +|.+
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r-~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRK-RHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHG-GGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHh-cCcC
Confidence            6789999999999999999999999999998 7864

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.68  E-value=4e-09  Score=68.99  Aligned_cols=33  Identities=30%  Similarity=0.846  Sum_probs=26.1

Q ss_pred             ccCCC--CCCccCChHHHHHHHHHhcCCCcccCCC
Q psy5888         231 YACKF--CGKVFPRSANLTRHLRTHTGEQPYKCKY  263 (447)
Q Consensus       231 ~~C~~--Cgk~F~~~~~L~~H~r~H~~ekp~~C~~  263 (447)
                      |.|++  ||+.|.+..+|++|+++|+|++||.|++
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF   36 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCS
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCCC
Confidence            66776  8888888888888888888888888864

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.67  E-value=5.9e-09  Score=64.83  Aligned_cols=29  Identities=38%  Similarity=0.909  Sum_probs=19.6

Q ss_pred             CCccCCCCCCccCChHHHHHHHHHhcCCC
Q psy5888         229 DRYACKFCGKVFPRSANLTRHLRTHTGEQ  257 (447)
Q Consensus       229 k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek  257 (447)
                      ++|.|.+|++.|.+.++|.+|+++|+|||
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            35667777777777777777777776664

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.66  E-value=3.3e-09  Score=69.46  Aligned_cols=29  Identities=31%  Similarity=0.738  Sum_probs=14.9

Q ss_pred             hccCCCCCCCCCCCcccCCchhHHHHHhh
Q psy5888         281 IHNKEKPFKCPLCDRCFGQQTNLDRHLKK  309 (447)
Q Consensus       281 ~H~~~kp~~C~~C~k~F~~~~~L~~Hlr~  309 (447)
                      +|+|+|||+|.+|++.|.+..+|..|++.
T Consensus         2 ~HTgekP~~C~~C~k~F~~~~~L~~H~~~   30 (36)
T d2ct1a2           2 THSGEKPYECYICHARFTQSGTMKMHILQ   30 (36)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHHH
T ss_pred             ccCCCCCEeCCCCcccccchHHHHHHccc
Confidence            35555555555555555555555555443

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.66  E-value=4.1e-09  Score=69.04  Aligned_cols=34  Identities=38%  Similarity=0.794  Sum_probs=29.7

Q ss_pred             HHhcCCCcccCCCCCCcccchhhHHHHhhhhccCC
Q psy5888         251 RTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKE  285 (447)
Q Consensus       251 r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~  285 (447)
                      |+|+|+|||+|.+|++.|.....|.+|++ +|.++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r-~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFK-RYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHH-HTTCS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCc-ccCCC
Confidence            57899999999999999999999999998 67765

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.65  E-value=4.9e-09  Score=68.06  Aligned_cols=30  Identities=37%  Similarity=0.774  Sum_probs=15.6

Q ss_pred             ccCCCCCCCCCCCcccCCchhHHHHHhhhc
Q psy5888         282 HNKEKPFKCPLCDRCFGQQTNLDRHLKKHE  311 (447)
Q Consensus       282 H~~~kp~~C~~C~k~F~~~~~L~~Hlr~H~  311 (447)
                      |+|+|||+|.+|++.|.+..+|.+|+++|+
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht   31 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHT   31 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGT
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccC
Confidence            445555555555555555555555555554

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.61  E-value=1.1e-08  Score=63.45  Aligned_cols=29  Identities=38%  Similarity=0.833  Sum_probs=20.5

Q ss_pred             CCccCCCCCCccCChHHHHHHHHHhcCCC
Q psy5888         229 DRYACKFCGKVFPRSANLTRHLRTHTGEQ  257 (447)
Q Consensus       229 k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek  257 (447)
                      ++|.|.+||+.|.+.++|.+|+++|+|+|
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            45777777777777777777777777664

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.61  E-value=9.2e-09  Score=63.95  Aligned_cols=28  Identities=36%  Similarity=0.871  Sum_probs=15.2

Q ss_pred             CCCCCCCCcccCCchhHHHHHhhhcCCC
Q psy5888         287 PFKCPLCDRCFGQQTNLDRHLKKHEADG  314 (447)
Q Consensus       287 p~~C~~C~k~F~~~~~L~~Hlr~H~~ek  314 (447)
                      ||.|.+|++.|.+...|.+|+++|+|||
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           2 SFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             cCCCCCCCCCCCCchHcccccCcccCCC
Confidence            4555555555555555555555555543

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.60  E-value=1e-08  Score=66.53  Aligned_cols=32  Identities=28%  Similarity=0.844  Sum_probs=24.6

Q ss_pred             hcCCCcccCCCCCCcccchhhHHHHhhhhccCC
Q psy5888         253 HTGEQPYKCKYCERSFSISSNLQRHVRNIHNKE  285 (447)
Q Consensus       253 H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~  285 (447)
                      |+|+|||+|.+|++.|.++.+|++|++ +|+.+
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r-~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLK-VHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHG-GGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHcc-ccCCc
Confidence            577788888888888888888888877 67654

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.59  E-value=7.9e-09  Score=67.63  Aligned_cols=35  Identities=37%  Similarity=0.849  Sum_probs=31.0

Q ss_pred             HHhcCCCcccCCCCCCcccchhhHHHHhhhhccCC
Q psy5888         251 RTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKE  285 (447)
Q Consensus       251 r~H~~ekp~~C~~C~k~F~s~~~L~~H~~~~H~~~  285 (447)
                      |+|+|||||+|++|++.|..+.+|++|++..|..+
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~~   35 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTEN   35 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCCC
Confidence            57999999999999999999999999987567643

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.57  E-value=1.8e-08  Score=62.51  Aligned_cols=29  Identities=34%  Similarity=0.796  Sum_probs=18.3

Q ss_pred             CCCCCCCCCcccCCchhHHHHHhhhcCCC
Q psy5888         286 KPFKCPLCDRCFGQQTNLDRHLKKHEADG  314 (447)
Q Consensus       286 kp~~C~~C~k~F~~~~~L~~Hlr~H~~ek  314 (447)
                      |||.|.+|++.|.+.+.|.+|+++|++||
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            35666666666666666666666666654

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.56  E-value=1.4e-08  Score=62.39  Aligned_cols=27  Identities=48%  Similarity=0.997  Sum_probs=19.1

Q ss_pred             CCccCCCCCCccCChHHHHHHHHHhcC
Q psy5888         229 DRYACKFCGKVFPRSANLTRHLRTHTG  255 (447)
Q Consensus       229 k~~~C~~Cgk~F~~~~~L~~H~r~H~~  255 (447)
                      ++|+|.+|++.|.+..+|.+|+++|+|
T Consensus         2 KPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           2 KPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             cCccCCCCcCEecccccccccCCCccC
Confidence            567777777777777777777777765

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.54  E-value=7.3e-09  Score=71.91  Aligned_cols=40  Identities=25%  Similarity=0.653  Sum_probs=27.9

Q ss_pred             hHHHHhhhhccCCCCCCCCC--CCcccCCchhHHHHHhhhcCCC
Q psy5888         273 NLQRHVRNIHNKEKPFKCPL--CDRCFGQQTNLDRHLKKHEADG  314 (447)
Q Consensus       273 ~L~~H~~~~H~~~kp~~C~~--C~k~F~~~~~L~~Hlr~H~~ek  314 (447)
                      .|.+|+.  |.+++||.|.+  |++.|.+.++|..|+++|+++|
T Consensus         6 ~l~~h~~--h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           6 SIDKYVK--EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SGGGSCE--EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hhcchhh--ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            4555653  77777777766  7777777777777777777764

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.53  E-value=1.3e-08  Score=62.67  Aligned_cols=27  Identities=37%  Similarity=0.955  Sum_probs=14.7

Q ss_pred             CCCCCCCCCCcccCCchhHHHHHhhhc
Q psy5888         285 EKPFKCPLCDRCFGQQTNLDRHLKKHE  311 (447)
Q Consensus       285 ~kp~~C~~C~k~F~~~~~L~~Hlr~H~  311 (447)
                      ||||+|.+|++.|.+.++|.+|+++|+
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HT   27 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHT   27 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHH
T ss_pred             CcCccCCCCcCEecccccccccCCCcc
Confidence            345555555555555555555555554

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.47  E-value=4.4e-09  Score=73.06  Aligned_cols=40  Identities=15%  Similarity=0.648  Sum_probs=32.0

Q ss_pred             HHHHHHHHhcCCCcccCCC--CCCcccchhhHHHHhhhhccCCC
Q psy5888         245 NLTRHLRTHTGEQPYKCKY--CERSFSISSNLQRHVRNIHNKEK  286 (447)
Q Consensus       245 ~L~~H~r~H~~ekp~~C~~--C~k~F~s~~~L~~H~~~~H~~~k  286 (447)
                      .|.+|+. |++++||.|.+  |++.|...++|..|++ +|+|+|
T Consensus         6 ~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r-~Htgek   47 (47)
T d1ncsa_           6 SIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQ-THLEDR   47 (47)
T ss_dssp             SGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHH-HHTTTC
T ss_pred             hhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcc-cccCCC
Confidence            4566664 88888888877  8888888888888888 788875

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.40  E-value=5e-08  Score=63.62  Aligned_cols=32  Identities=25%  Similarity=0.850  Sum_probs=16.3

Q ss_pred             ccCCC--CCCcccchhhHHHHhhhhccCCCCCCCC
Q psy5888         259 YKCKY--CERSFSISSNLQRHVRNIHNKEKPFKCP  291 (447)
Q Consensus       259 ~~C~~--C~k~F~s~~~L~~H~~~~H~~~kp~~C~  291 (447)
                      |.|++  |++.|.++.+|++|++ +|+|++||.|.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r-~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMK-LHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHH-HHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccC-eeCCCCCEeCC
Confidence            34444  5555555555555555 45555555553

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.34  E-value=1.4e-07  Score=58.74  Aligned_cols=28  Identities=50%  Similarity=0.940  Sum_probs=19.5

Q ss_pred             CCccCCC--CCCccCChHHHHHHHHHhcCC
Q psy5888         229 DRYACKF--CGKVFPRSANLTRHLRTHTGE  256 (447)
Q Consensus       229 k~~~C~~--Cgk~F~~~~~L~~H~r~H~~e  256 (447)
                      ++|.|.+  |++.|.+.++|++|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            3577766  777777777777777777664

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.30  E-value=1.5e-07  Score=58.75  Aligned_cols=28  Identities=46%  Similarity=0.986  Sum_probs=20.2

Q ss_pred             CCccCCC--CCCccCChHHHHHHHHHhcCC
Q psy5888         229 DRYACKF--CGKVFPRSANLTRHLRTHTGE  256 (447)
Q Consensus       229 k~~~C~~--Cgk~F~~~~~L~~H~r~H~~e  256 (447)
                      ++|.|.+  ||+.|.+.++|++|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            4577766  777777777777777777765

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.28  E-value=1.5e-07  Score=56.41  Aligned_cols=26  Identities=42%  Similarity=0.845  Sum_probs=18.0

Q ss_pred             CCccCCCCCCccCChHHHHHHHHHhc
Q psy5888         229 DRYACKFCGKVFPRSANLTRHLRTHT  254 (447)
Q Consensus       229 k~~~C~~Cgk~F~~~~~L~~H~r~H~  254 (447)
                      ++|.|.+|||.|...++|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            45777777777777777777777664

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.28  E-value=2.1e-07  Score=58.55  Aligned_cols=28  Identities=57%  Similarity=1.101  Sum_probs=17.3

Q ss_pred             CccCCC--CCCccCChHHHHHHHHHhcCCC
Q psy5888         230 RYACKF--CGKVFPRSANLTRHLRTHTGEQ  257 (447)
Q Consensus       230 ~~~C~~--Cgk~F~~~~~L~~H~r~H~~ek  257 (447)
                      +|.|++  |++.|.+.++|.+|+++|+|+|
T Consensus         2 pf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           2 PFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             cCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            466643  6666666666666666666653

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.26  E-value=1.3e-07  Score=56.72  Aligned_cols=25  Identities=40%  Similarity=0.860  Sum_probs=15.2

Q ss_pred             CCCCCCCCCcccCCchhHHHHHhhh
Q psy5888         286 KPFKCPLCDRCFGQQTNLDRHLKKH  310 (447)
Q Consensus       286 kp~~C~~C~k~F~~~~~L~~Hlr~H  310 (447)
                      |||+|.+||+.|.+.+.|..|+++|
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriH   25 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIH   25 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCC
Confidence            3566666666666666666666655

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.26  E-value=2.6e-07  Score=57.59  Aligned_cols=27  Identities=33%  Similarity=0.908  Sum_probs=14.5

Q ss_pred             CCCCCC--CCcccCCchhHHHHHhhhcCC
Q psy5888         287 PFKCPL--CDRCFGQQTNLDRHLKKHEAD  313 (447)
Q Consensus       287 p~~C~~--C~k~F~~~~~L~~Hlr~H~~e  313 (447)
                      ||+|.+  |++.|.+.++|++|+++|+||
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           2 PHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            455555  555555555555555555543

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.19  E-value=4e-07  Score=57.21  Aligned_cols=27  Identities=33%  Similarity=0.865  Sum_probs=12.9

Q ss_pred             CCCCCC--CCcccCCchhHHHHHhhhcCC
Q psy5888         287 PFKCPL--CDRCFGQQTNLDRHLKKHEAD  313 (447)
Q Consensus       287 p~~C~~--C~k~F~~~~~L~~Hlr~H~~e  313 (447)
                      ||.|++  |++.|.+..+|.+|+++|+++
T Consensus         2 pf~C~~~~C~k~F~~~~~L~~H~r~Htge   30 (31)
T d1sp2a_           2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             cCCCcCCCCCcCcCChhHhhhhcCccccc
Confidence            444432  555555555555555554444

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.17  E-value=2.8e-07  Score=57.46  Aligned_cols=26  Identities=35%  Similarity=0.876  Sum_probs=12.6

Q ss_pred             CCCCCC--CCcccCCchhHHHHHhhhcC
Q psy5888         287 PFKCPL--CDRCFGQQTNLDRHLKKHEA  312 (447)
Q Consensus       287 p~~C~~--C~k~F~~~~~L~~Hlr~H~~  312 (447)
                      ||.|.+  |++.|.+.++|.+|+++|+|
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HTG   29 (30)
T d1ubdc3           2 PFQCTFEGCGKRFSLDFNLRTHVRIHTG   29 (30)
T ss_dssp             CEECCSTTCCCEESCHHHHHHHHHHHHC
T ss_pred             CccCCCCCCCceECcHHHcCccccccCC
Confidence            444444  44445444445445444444

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.99  E-value=2.1e-06  Score=54.13  Aligned_cols=26  Identities=38%  Similarity=0.915  Sum_probs=14.1

Q ss_pred             CCCCCCC--CCcccCCchhHHHHHhhhc
Q psy5888         286 KPFKCPL--CDRCFGQQTNLDRHLKKHE  311 (447)
Q Consensus       286 kp~~C~~--C~k~F~~~~~L~~Hlr~H~  311 (447)
                      +||.|.+  |++.|.+.++|.+|+++|+
T Consensus         2 rP~~C~~pgC~k~F~r~~~L~~H~r~Ht   29 (32)
T d1zfda_           2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQ   29 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGT
T ss_pred             cCeECcCCCCCCeeCCHHHHHHHhhhcc
Confidence            4555544  5555555555555555554

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.98  E-value=1.2e-06  Score=53.99  Aligned_cols=27  Identities=59%  Similarity=1.115  Sum_probs=16.8

Q ss_pred             CCccCCC--CCCccCChHHHHHHHHHhcC
Q psy5888         229 DRYACKF--CGKVFPRSANLTRHLRTHTG  255 (447)
Q Consensus       229 k~~~C~~--Cgk~F~~~~~L~~H~r~H~~  255 (447)
                      ++|.|.+  |++.|.+.++|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            3566666  66666666666666666654

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.92  E-value=3.3e-06  Score=53.23  Aligned_cols=26  Identities=38%  Similarity=0.883  Sum_probs=13.4

Q ss_pred             CCccCCC--CCCccCChHHHHHHHHHhc
Q psy5888         229 DRYACKF--CGKVFPRSANLTRHLRTHT  254 (447)
Q Consensus       229 k~~~C~~--Cgk~F~~~~~L~~H~r~H~  254 (447)
                      ++|.|.+  |++.|.+..+|.+|+++|+
T Consensus         2 rP~~C~~pgC~k~F~r~~~L~~H~r~Ht   29 (32)
T d1zfda_           2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQ   29 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGT
T ss_pred             cCeECcCCCCCCeeCCHHHHHHHhhhcc
Confidence            3455554  5555555555555555554

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.89  E-value=2.7e-06  Score=48.82  Aligned_cols=25  Identities=48%  Similarity=1.015  Sum_probs=16.2

Q ss_pred             ccCCCCCCccCChHHHHHHHHHhcC
Q psy5888         231 YACKFCGKVFPRSANLTRHLRTHTG  255 (447)
Q Consensus       231 ~~C~~Cgk~F~~~~~L~~H~r~H~~  255 (447)
                      ++|++|++.|.++..|+.|+|.|+|
T Consensus         2 hkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           2 HKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CccchhhhHhcchhHHHHHhhccCC
Confidence            4566666666666666666666654

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.84  E-value=3e-06  Score=51.66  Aligned_cols=24  Identities=50%  Similarity=1.009  Sum_probs=13.6

Q ss_pred             CccCCC--CCCccCChHHHHHHHHHh
Q psy5888         230 RYACKF--CGKVFPRSANLTRHLRTH  253 (447)
Q Consensus       230 ~~~C~~--Cgk~F~~~~~L~~H~r~H  253 (447)
                      +|.|.+  |||.|.+.++|++|+++|
T Consensus         2 Pf~C~~~gC~K~F~~~~~L~~H~r~H   27 (28)
T d1ubdc4           2 PYVCPFDGCNKKFAQSTNLKSHILTH   27 (28)
T ss_dssp             CCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             CcCCCCCCcCCcCCCHHHHHHHHhhc
Confidence            455555  555555555555555555

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.84  E-value=3.5e-06  Score=48.32  Aligned_cols=24  Identities=33%  Similarity=0.996  Sum_probs=13.8

Q ss_pred             CCCCCCCcccCCchhHHHHHhhhc
Q psy5888         288 FKCPLCDRCFGQQTNLDRHLKKHE  311 (447)
Q Consensus       288 ~~C~~C~k~F~~~~~L~~Hlr~H~  311 (447)
                      .+|.+|++.|+++..|+.|++.|+
T Consensus         2 hkc~~c~kcfsrkdklk~hmr~ht   25 (26)
T d2dmda2           2 HKCEVCGKCFSRKDKLKTHMRCHT   25 (26)
T ss_dssp             CCBTTTTBCCCCHHHHHHHGGGCC
T ss_pred             CccchhhhHhcchhHHHHHhhccC
Confidence            455555555555555555555554

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.82  E-value=3.8e-06  Score=51.19  Aligned_cols=24  Identities=46%  Similarity=1.103  Sum_probs=12.4

Q ss_pred             CCCCCC--CCcccCCchhHHHHHhhh
Q psy5888         287 PFKCPL--CDRCFGQQTNLDRHLKKH  310 (447)
Q Consensus       287 p~~C~~--C~k~F~~~~~L~~Hlr~H  310 (447)
                      ||.|.+  |++.|.+.++|++|+++|
T Consensus         2 Pf~C~~~gC~K~F~~~~~L~~H~r~H   27 (28)
T d1ubdc4           2 PYVCPFDGCNKKFAQSTNLKSHILTH   27 (28)
T ss_dssp             CCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             CcCCCCCCcCCcCCCHHHHHHHHhhc
Confidence            455544  555555555555555554

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.82  E-value=3.6e-06  Score=51.75  Aligned_cols=31  Identities=45%  Similarity=0.991  Sum_probs=21.5

Q ss_pred             CCccCCCCCCccCChHHHHHHHHHhcCCCcc
Q psy5888         229 DRYACKFCGKVFPRSANLTRHLRTHTGEQPY  259 (447)
Q Consensus       229 k~~~C~~Cgk~F~~~~~L~~H~r~H~~ekp~  259 (447)
                      +...|+.|||.|....+|.+|...|++||||
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            4456777777777777777777777777765

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.79  E-value=3.2e-06  Score=52.02  Aligned_cols=27  Identities=52%  Similarity=1.100  Sum_probs=15.1

Q ss_pred             CcccCCC--CCCcccchhhHHHHhhhhccC
Q psy5888         257 QPYKCKY--CERSFSISSNLQRHVRNIHNK  284 (447)
Q Consensus       257 kp~~C~~--C~k~F~s~~~L~~H~~~~H~~  284 (447)
                      |||+|.+  |++.|.+..+|++|++ +|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r-~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIR-IHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTH-HHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcC-ccCC
Confidence            3555555  5555555555555555 4543

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.71  E-value=6.8e-06  Score=48.61  Aligned_cols=26  Identities=46%  Similarity=0.935  Sum_probs=14.8

Q ss_pred             CCCCCCCCCCcccCCchhHHHHHhhh
Q psy5888         285 EKPFKCPLCDRCFGQQTNLDRHLKKH  310 (447)
Q Consensus       285 ~kp~~C~~C~k~F~~~~~L~~Hlr~H  310 (447)
                      ++||.|.+||+.|.+....++|.++|
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGG
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhc
Confidence            34555555555555555555555555

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.69  E-value=9.5e-06  Score=47.99  Aligned_cols=27  Identities=41%  Similarity=0.903  Sum_probs=18.6

Q ss_pred             CCcccCCCCCCcccchhhHHHHhhhhcc
Q psy5888         256 EQPYKCKYCERSFSISSNLQRHVRNIHN  283 (447)
Q Consensus       256 ekp~~C~~C~k~F~s~~~L~~H~~~~H~  283 (447)
                      |+||.|.+||+.|.+....++|.+ +|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~k-iH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTK-IHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHG-GGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhh-hcc
Confidence            467777777777777777777766 563

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.50  E-value=1.5e-05  Score=48.91  Aligned_cols=29  Identities=34%  Similarity=0.671  Sum_probs=14.3

Q ss_pred             ccCCCCCCcccchhhHHHHhhhhccCCCCC
Q psy5888         259 YKCKYCERSFSISSNLQRHVRNIHNKEKPF  288 (447)
Q Consensus       259 ~~C~~C~k~F~s~~~L~~H~~~~H~~~kp~  288 (447)
                      ..|..||+.|....+|.+|.. .|.+++||
T Consensus         6 ~~ce~cgk~frdvyhlnrhkl-shs~ekpy   34 (35)
T d2epra1           6 VACEICGKIFRDVYHLNRHKL-SHSGEKPY   34 (35)
T ss_dssp             EEETTTTEEESSHHHHHHHGG-GSCSCCCC
T ss_pred             hhHHHHHHHHHHHHHHHhhhc-ccCCCCCC
Confidence            345555555555555555544 45555544

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.43  E-value=5.7e-05  Score=44.50  Aligned_cols=28  Identities=36%  Similarity=0.745  Sum_probs=24.3

Q ss_pred             CccCCCCCCccCChHHHHHHHHHhcCCC
Q psy5888         230 RYACKFCGKVFPRSANLTRHLRTHTGEQ  257 (447)
Q Consensus       230 ~~~C~~Cgk~F~~~~~L~~H~r~H~~ek  257 (447)
                      +|.|++||......+-|+.|+|.|++++
T Consensus         1 kYvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           1 KYICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             CccccccCcccCCHHHHHHHHHHhcCCC
Confidence            4889999999999999999999998874

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.32  E-value=4.6e-05  Score=45.68  Aligned_cols=27  Identities=30%  Similarity=0.920  Sum_probs=14.5

Q ss_pred             CCCCCCCCCcccCCchhHHHHHhhhcC
Q psy5888         286 KPFKCPLCDRCFGQQTNLDRHLKKHEA  312 (447)
Q Consensus       286 kp~~C~~C~k~F~~~~~L~~Hlr~H~~  312 (447)
                      +||.|++|+..|.++..+..|.+.|.|
T Consensus         2 kp~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           2 KPYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CCcccchHHHHhhccccceEeeecccC
Confidence            455555555555555555555555543

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.31  E-value=4.8e-05  Score=44.62  Aligned_cols=28  Identities=36%  Similarity=0.812  Sum_probs=18.2

Q ss_pred             CCCCCCCCCCcccCCchhHHHHHhhhcC
Q psy5888         285 EKPFKCPLCDRCFGQQTNLDRHLKKHEA  312 (447)
Q Consensus       285 ~kp~~C~~C~k~F~~~~~L~~Hlr~H~~  312 (447)
                      ++||+|.+|.+.-...+.|..|++.|+|
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CCcceeeecccccCCchheEEeeecccC
Confidence            3566666666666666666666666665

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.14  E-value=0.00012  Score=43.85  Aligned_cols=27  Identities=37%  Similarity=0.910  Sum_probs=14.5

Q ss_pred             CCccCCCCCCccCChHHHHHHHHHhcC
Q psy5888         229 DRYACKFCGKVFPRSANLTRHLRTHTG  255 (447)
Q Consensus       229 k~~~C~~Cgk~F~~~~~L~~H~r~H~~  255 (447)
                      ++|.|++|+..|+++..+.-|.+.|.|
T Consensus         2 kp~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           2 KPYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CCcccchHHHHhhccccceEeeecccC
Confidence            445555555555555555555555543

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.11  E-value=0.00012  Score=42.68  Aligned_cols=26  Identities=50%  Similarity=0.844  Sum_probs=16.1

Q ss_pred             ccCCCCCCccCChHHHHHHHHHhcCC
Q psy5888         231 YACKFCGKVFPRSANLTRHLRTHTGE  256 (447)
Q Consensus       231 ~~C~~Cgk~F~~~~~L~~H~r~H~~e  256 (447)
                      +.|..|||.|...+.|++|..+|+|+
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccCC
Confidence            45666666666666666666666653

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.07  E-value=0.00023  Score=40.87  Aligned_cols=26  Identities=42%  Similarity=0.659  Sum_probs=18.9

Q ss_pred             cCCCCCCccCChHHHHHHHHHhcCCC
Q psy5888         232 ACKFCGKVFPRSANLTRHLRTHTGEQ  257 (447)
Q Consensus       232 ~C~~Cgk~F~~~~~L~~H~r~H~~ek  257 (447)
                      +|+.|.+.|.++..|+.|-|.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            47777777777777777777777764

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.96  E-value=0.0002  Score=41.95  Aligned_cols=27  Identities=41%  Similarity=0.763  Sum_probs=15.4

Q ss_pred             CCccCCCCCCccCChHHHHHHHHHhcC
Q psy5888         229 DRYACKFCGKVFPRSANLTRHLRTHTG  255 (447)
Q Consensus       229 k~~~C~~Cgk~F~~~~~L~~H~r~H~~  255 (447)
                      ++|+|.+|...-...+.|..|+|.|+|
T Consensus         2 rpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CcceeeecccccCCchheEEeeecccC
Confidence            345555555555555555555555554

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.82  E-value=0.00042  Score=40.70  Aligned_cols=26  Identities=19%  Similarity=0.474  Sum_probs=19.0

Q ss_pred             CCCCCCCcccCCchhHHHHHhhhcCC
Q psy5888         288 FKCPLCDRCFGQQTNLDRHLKKHEAD  313 (447)
Q Consensus       288 ~~C~~C~k~F~~~~~L~~Hlr~H~~e  313 (447)
                      |.|+.||....-.+-|+.|++.|+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            66777777777777777777777765

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.77  E-value=0.00043  Score=44.30  Aligned_cols=29  Identities=28%  Similarity=0.738  Sum_probs=23.1

Q ss_pred             CCccCCCCCCccCChHHHHHHHHHhcCCC
Q psy5888         229 DRYACKFCGKVFPRSANLTRHLRTHTGEQ  257 (447)
Q Consensus       229 k~~~C~~Cgk~F~~~~~L~~H~r~H~~ek  257 (447)
                      +.|.|.+|++.|.+...|--||+.|..++
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CccCCCCCCCccCCcccccchHhhhcchH
Confidence            56888888888888888888888886543

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.73  E-value=0.00054  Score=40.47  Aligned_cols=23  Identities=26%  Similarity=0.686  Sum_probs=9.8

Q ss_pred             CCCCCCCCcccCCchhHHHHHhh
Q psy5888         287 PFKCPLCDRCFGQQTNLDRHLKK  309 (447)
Q Consensus       287 p~~C~~C~k~F~~~~~L~~Hlr~  309 (447)
                      ||.|..|.......++|+.|+++
T Consensus         2 py~cqyc~yrsadssnlkthikt   24 (30)
T d1klra_           2 TYQCQYCEFRSADSSNLKTHIKT   24 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHH
T ss_pred             Cccccccccccccchhhhhhhhc
Confidence            34444444444444444444433

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.64  E-value=0.00051  Score=39.93  Aligned_cols=26  Identities=38%  Similarity=0.668  Sum_probs=15.9

Q ss_pred             ccCCCCCCcccchhhHHHHhhhhccCC
Q psy5888         259 YKCKYCERSFSISSNLQRHVRNIHNKE  285 (447)
Q Consensus       259 ~~C~~C~k~F~s~~~L~~H~~~~H~~~  285 (447)
                      ..|..||+.|.-.+.|++|.. +|+++
T Consensus         3 hvc~ecgkaf~essklkrh~l-vhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQL-VHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGG-GTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhh-cccCC
Confidence            356666666666666666665 56553

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=96.63  E-value=0.00053  Score=38.72  Aligned_cols=23  Identities=43%  Similarity=1.012  Sum_probs=11.4

Q ss_pred             CCCCCCCcccCCchhHHHHHhhh
Q psy5888         288 FKCPLCDRCFGQQTNLDRHLKKH  310 (447)
Q Consensus       288 ~~C~~C~k~F~~~~~L~~Hlr~H  310 (447)
                      |+|..|.+.|..++.|.+|++.|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            34555555555555555554444

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.55  E-value=0.00071  Score=38.77  Aligned_cols=26  Identities=35%  Similarity=0.602  Sum_probs=17.8

Q ss_pred             cCCCCCCcccchhhHHHHhhhhccCCC
Q psy5888         260 KCKYCERSFSISSNLQRHVRNIHNKEK  286 (447)
Q Consensus       260 ~C~~C~k~F~s~~~L~~H~~~~H~~~k  286 (447)
                      .|+.|.+.|.++..|+.|.+ .|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr-~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNR-KHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHH-HHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccc-cccCCC
Confidence            47777777777777777766 576653

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.55  E-value=0.00073  Score=40.29  Aligned_cols=27  Identities=33%  Similarity=0.826  Sum_probs=16.7

Q ss_pred             CCccCCC--CCCccCChHHHHHHHHHhcC
Q psy5888         229 DRYACKF--CGKVFPRSANLTRHLRTHTG  255 (447)
Q Consensus       229 k~~~C~~--Cgk~F~~~~~L~~H~r~H~~  255 (447)
                      ++|.|.+  |+|.|...+.|+.|++.++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            3566666  66666666666666665543

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.54  E-value=0.0011  Score=39.11  Aligned_cols=30  Identities=47%  Similarity=0.872  Sum_probs=26.5

Q ss_pred             CcccCCCCCCcccchhhHHHHhhhhccCCC
Q psy5888         257 QPYKCKYCERSFSISSNLQRHVRNIHNKEK  286 (447)
Q Consensus       257 kp~~C~~C~k~F~s~~~L~~H~~~~H~~~k  286 (447)
                      +||.|.+|..+-...++|+.|+++.|..++
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhskek   30 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CCccccccccccccchhhhhhhhcccccCC
Confidence            689999999999999999999998887653

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.47  E-value=0.00076  Score=39.69  Aligned_cols=27  Identities=52%  Similarity=0.805  Sum_probs=18.4

Q ss_pred             CccCCC--CCCccCChHHHHHHHHHhcCC
Q psy5888         230 RYACKF--CGKVFPRSANLTRHLRTHTGE  256 (447)
Q Consensus       230 ~~~C~~--Cgk~F~~~~~L~~H~r~H~~e  256 (447)
                      +|.|.+  |.|.|.+..+|.+|..+|+|+
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CcCcccccccccchhhhhhhhhhccccCC
Confidence            566666  777777777777777777664

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.46  E-value=0.00063  Score=40.96  Aligned_cols=20  Identities=40%  Similarity=0.881  Sum_probs=9.4

Q ss_pred             CCCCCCCcccCCchhHHHHH
Q psy5888         288 FKCPLCDRCFGQQTNLDRHL  307 (447)
Q Consensus       288 ~~C~~C~k~F~~~~~L~~Hl  307 (447)
                      |.|.+|++.|.+++-|.+|.
T Consensus         2 f~C~~C~R~FaRrDLlLRH~   21 (31)
T d2adra2           2 YPCGLCNRAFTRRDLLIRHA   21 (31)
T ss_dssp             EECTTTCCEESSHHHHHHHH
T ss_pred             cccccccchhhHHHHHHHHH
Confidence            44444444444444444443

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=96.34  E-value=0.0011  Score=37.38  Aligned_cols=21  Identities=62%  Similarity=1.059  Sum_probs=10.7

Q ss_pred             ccCCCCCCcccchhhHHHHhh
Q psy5888         259 YKCKYCERSFSISSNLQRHVR  279 (447)
Q Consensus       259 ~~C~~C~k~F~s~~~L~~H~~  279 (447)
                      |+|..|.+.|.-++.|.+|++
T Consensus         1 ykcglcersfveksalsrhqr   21 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQR   21 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGG
T ss_pred             CcccchHHHHHHHHHHHHHHH
Confidence            345555555555555555544

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.29  E-value=0.0009  Score=39.89  Aligned_cols=24  Identities=29%  Similarity=0.840  Sum_probs=11.5

Q ss_pred             CCCCCC--CCcccCCchhHHHHHhhh
Q psy5888         287 PFKCPL--CDRCFGQQTNLDRHLKKH  310 (447)
Q Consensus       287 p~~C~~--C~k~F~~~~~L~~Hlr~H  310 (447)
                      ||.|.+  |++.|...+.|++|++.+
T Consensus         2 PY~Ck~~gC~K~YtdPSSLRKH~k~~   27 (29)
T d2glia5           2 PYVCKLPGCTKRYTDPSSLRKHVKTV   27 (29)
T ss_dssp             CEECCSTTTCCEESSHHHHHHHHHHS
T ss_pred             CeecccCCCCcccCCHHHHHHHHHhh
Confidence            444444  444555555555554443

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.17  E-value=0.0012  Score=38.23  Aligned_cols=25  Identities=40%  Similarity=0.943  Sum_probs=14.7

Q ss_pred             CCCCCCCCCcccCCchhHHHHHhhh
Q psy5888         286 KPFKCPLCDRCFGQQTNLDRHLKKH  310 (447)
Q Consensus       286 kp~~C~~C~k~F~~~~~L~~Hlr~H  310 (447)
                      +||+|..|...-...+.|..|+|+|
T Consensus         2 kp~kck~cdyaaadsssl~kh~rih   26 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIH   26 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHS
T ss_pred             CCcccccccchhcchhhHhhhhhcc
Confidence            4555666665555555666666555

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.13  E-value=0.0023  Score=37.51  Aligned_cols=28  Identities=36%  Similarity=0.802  Sum_probs=20.8

Q ss_pred             CCccCCCCCCccCChHHHHHHHHHhcCC
Q psy5888         229 DRYACKFCGKVFPRSANLTRHLRTHTGE  256 (447)
Q Consensus       229 k~~~C~~Cgk~F~~~~~L~~H~r~H~~e  256 (447)
                      ..|.|..|...|.+.-.|..||-.|+|+
T Consensus         3 qvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           3 QVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             ceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            3577777777777777777777777764

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.03  E-value=0.0021  Score=37.15  Aligned_cols=26  Identities=38%  Similarity=0.767  Sum_probs=17.3

Q ss_pred             CCccCCCCCCccCChHHHHHHHHHhc
Q psy5888         229 DRYACKFCGKVFPRSANLTRHLRTHT  254 (447)
Q Consensus       229 k~~~C~~Cgk~F~~~~~L~~H~r~H~  254 (447)
                      ++|+|..|...-...+.|..|+|+|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            45667777766666666777766664

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.02  E-value=0.0013  Score=42.36  Aligned_cols=26  Identities=27%  Similarity=0.732  Sum_probs=21.0

Q ss_pred             cCCCCCCCCCCCcccCCchhHHHHHh
Q psy5888         283 NKEKPFKCPLCDRCFGQQTNLDRHLK  308 (447)
Q Consensus       283 ~~~kp~~C~~C~k~F~~~~~L~~Hlr  308 (447)
                      +|-|||.|.+|++.|.+++.+.+|..
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhh
Confidence            35678888888888888888888864

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.95  E-value=0.0021  Score=37.56  Aligned_cols=24  Identities=38%  Similarity=0.808  Sum_probs=18.7

Q ss_pred             CccCCC--CCCccCChHHHHHHHHHh
Q psy5888         230 RYACKF--CGKVFPRSANLTRHLRTH  253 (447)
Q Consensus       230 ~~~C~~--Cgk~F~~~~~L~~H~r~H  253 (447)
                      +|.|++  |++.|...+.|++|.++|
T Consensus         3 py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           3 PYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CccCCccCccccccCHHHHhhhhhcc
Confidence            577777  888888888888887776

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.92  E-value=0.0018  Score=41.70  Aligned_cols=26  Identities=38%  Similarity=0.925  Sum_probs=23.3

Q ss_pred             cCCCcccCCCCCCcccchhhHHHHhh
Q psy5888         254 TGEQPYKCKYCERSFSISSNLQRHVR  279 (447)
Q Consensus       254 ~~ekp~~C~~C~k~F~s~~~L~~H~~  279 (447)
                      +|.|||.|.+|+++|.....+.+|..
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhh
Confidence            47799999999999999999999965

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.91  E-value=0.0018  Score=41.28  Aligned_cols=27  Identities=30%  Similarity=0.746  Sum_probs=16.1

Q ss_pred             CCCCCCCCcccCCchhHHHHHhhhcCC
Q psy5888         287 PFKCPLCDRCFGQQTNLDRHLKKHEAD  313 (447)
Q Consensus       287 p~~C~~C~k~F~~~~~L~~Hlr~H~~e  313 (447)
                      .|.|.+|++.|.+...|--|++.|..+
T Consensus         5 ~~~C~~C~k~F~s~qALGGH~~~Hr~~   31 (37)
T d1njqa_           5 SYTCSFCKREFRSAQALGGHMNVHRRD   31 (37)
T ss_dssp             SEECTTTCCEESSHHHHHHHHHTTCCS
T ss_pred             ccCCCCCCCccCCcccccchHhhhcch
Confidence            356666666666666666666665543

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.91  E-value=0.0021  Score=37.69  Aligned_cols=23  Identities=35%  Similarity=0.915  Sum_probs=15.2

Q ss_pred             CccCCCCCCccCChHHHHHHHHH
Q psy5888         230 RYACKFCGKVFPRSANLTRHLRT  252 (447)
Q Consensus       230 ~~~C~~Cgk~F~~~~~L~~H~r~  252 (447)
                      +|.|.+|+..|..+.+|..||+.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            36666677777777777776653

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=95.82  E-value=0.0017  Score=39.03  Aligned_cols=25  Identities=44%  Similarity=0.959  Sum_probs=22.3

Q ss_pred             cccCCCCCCcccchhhHHHHhhhhc
Q psy5888         258 PYKCKYCERSFSISSNLQRHVRNIH  282 (447)
Q Consensus       258 p~~C~~C~k~F~s~~~L~~H~~~~H  282 (447)
                      ||.|.+|++.|.++.-|.+|.+..|
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH   25 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIH   25 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTS
T ss_pred             CcccccccchhhHHHHHHHHHHHHh
Confidence            6899999999999999999988655

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.81  E-value=0.0024  Score=37.38  Aligned_cols=27  Identities=26%  Similarity=0.721  Sum_probs=16.5

Q ss_pred             CCCCCCCCcccCCchhHHHHHhhhcCC
Q psy5888         287 PFKCPLCDRCFGQQTNLDRHLKKHEAD  313 (447)
Q Consensus       287 p~~C~~C~k~F~~~~~L~~Hlr~H~~e  313 (447)
                      .|.|..|...|.++..|+.|+-.|+|+
T Consensus         4 vftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           4 VFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             eEEeHHHHHHHHHHHhheeeeecccCC
Confidence            356666666666666666666666553

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.43  E-value=0.003  Score=37.07  Aligned_cols=28  Identities=39%  Similarity=0.825  Sum_probs=19.3

Q ss_pred             CcccCCC--CCCcccchhhHHHHhhhhccCC
Q psy5888         257 QPYKCKY--CERSFSISSNLQRHVRNIHNKE  285 (447)
Q Consensus       257 kp~~C~~--C~k~F~s~~~L~~H~~~~H~~~  285 (447)
                      +||.|.+  |.+.|.+..+|.+|.. .|+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~-thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSL-THTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHH-HHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhc-cccCC
Confidence            4667765  7777777777777766 56654

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.28  E-value=0.0041  Score=36.33  Aligned_cols=22  Identities=45%  Similarity=1.118  Sum_probs=11.1

Q ss_pred             cccCCC--CCCcccchhhHHHHhh
Q psy5888         258 PYKCKY--CERSFSISSNLQRHVR  279 (447)
Q Consensus       258 p~~C~~--C~k~F~s~~~L~~H~~  279 (447)
                      ||+|+.  |++.|...+.|++|.+
T Consensus         3 py~c~hegcdk~fs~ps~lkrhek   26 (29)
T d2j7ja2           3 PYECPHEGCDKRFSLPSRLKRHEK   26 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHH
T ss_pred             CccCCccCccccccCHHHHhhhhh
Confidence            445544  5555555555555544

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.02  E-value=0.0055  Score=35.87  Aligned_cols=21  Identities=33%  Similarity=0.899  Sum_probs=10.4

Q ss_pred             CCCCCCCcccCCchhHHHHHh
Q psy5888         288 FKCPLCDRCFGQQTNLDRHLK  308 (447)
Q Consensus       288 ~~C~~C~k~F~~~~~L~~Hlr  308 (447)
                      |.|..|...|..+.+|..||+
T Consensus         2 y~C~~CnF~FKTKGNLTKHmk   22 (29)
T d1bboa2           2 YHCTYCNFSFKTKGNLTKHMK   22 (29)
T ss_dssp             EECSSSSCEESSHHHHHHHHH
T ss_pred             cccceeeeeEeeccchhHhhh
Confidence            445555555555555555544

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.92  E-value=0.0076  Score=37.30  Aligned_cols=27  Identities=37%  Similarity=0.860  Sum_probs=18.8

Q ss_pred             CccCCC--CC---CccCChHHHHHHHHHhcCC
Q psy5888         230 RYACKF--CG---KVFPRSANLTRHLRTHTGE  256 (447)
Q Consensus       230 ~~~C~~--Cg---k~F~~~~~L~~H~r~H~~e  256 (447)
                      .|.|.+  |.   +.|.....|..|||+|+||
T Consensus         2 ~y~C~W~~C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2           2 EFVCHWGGCSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CeEEECCCCCCCCCcchhHHHHHHHHhhcCCC
Confidence            366655  63   4577778888888888775

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.80  E-value=0.0066  Score=35.60  Aligned_cols=25  Identities=44%  Similarity=0.816  Sum_probs=14.1

Q ss_pred             CCCCCCCCcccCCchhHHHHHhhhc
Q psy5888         287 PFKCPLCDRCFGQQTNLDRHLKKHE  311 (447)
Q Consensus       287 p~~C~~C~k~F~~~~~L~~Hlr~H~  311 (447)
                      ||+|.+|..--.+.++|..|++.-|
T Consensus         2 PFkC~~CsFDtkq~SnL~kH~kk~H   26 (29)
T d1x5wa2           2 PFKCNYCSFDTKQPSNLSKHMKKFH   26 (29)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHHH
T ss_pred             CcccceecccccCcchHHHHHHHHc
Confidence            5556666555555566666655433

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.57  E-value=0.009  Score=35.03  Aligned_cols=22  Identities=23%  Similarity=0.766  Sum_probs=12.1

Q ss_pred             CccCCCCCCccCChHHHHHHHH
Q psy5888         230 RYACKFCGKVFPRSANLTRHLR  251 (447)
Q Consensus       230 ~~~C~~Cgk~F~~~~~L~~H~r  251 (447)
                      +|+|.+|..-..+.++|..|++
T Consensus         2 PFkC~~CsFDtkq~SnL~kH~k   23 (29)
T d1x5wa2           2 PFKCNYCSFDTKQPSNLSKHMK   23 (29)
T ss_dssp             SEECSSSSCEESSHHHHHHHHH
T ss_pred             CcccceecccccCcchHHHHHH
Confidence            4555555555555555555554

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.54  E-value=0.0058  Score=36.64  Aligned_cols=22  Identities=36%  Similarity=0.881  Sum_probs=12.1

Q ss_pred             CcccCCC--CCCcccchhhHHHHh
Q psy5888         257 QPYKCKY--CERSFSISSNLQRHV  278 (447)
Q Consensus       257 kp~~C~~--C~k~F~s~~~L~~H~  278 (447)
                      |||.|.+  |.|.|...++-..|+
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHq   24 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQ   24 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHH
T ss_pred             CCccccCCChhhhhcchhhhhhhc
Confidence            3555555  555555555555554

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=94.16  E-value=0.017  Score=32.55  Aligned_cols=22  Identities=45%  Similarity=0.963  Sum_probs=19.0

Q ss_pred             ccCCCCCCccCChHHHHHHHHH
Q psy5888         231 YACKFCGKVFPRSANLTRHLRT  252 (447)
Q Consensus       231 ~~C~~Cgk~F~~~~~L~~H~r~  252 (447)
                      |.|++|-+.|.++.++..|.++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            7889999999999999888874

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.01  E-value=0.013  Score=37.05  Aligned_cols=26  Identities=38%  Similarity=0.787  Sum_probs=12.3

Q ss_pred             CCCCCCC--CCCcccCCchhHHHHHhhh
Q psy5888         285 EKPFKCP--LCDRCFGQQTNLDRHLKKH  310 (447)
Q Consensus       285 ~kp~~C~--~C~k~F~~~~~L~~Hlr~H  310 (447)
                      +|||.|.  -|+..|.+...|..|.+.|
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH   31 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKH   31 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhh
Confidence            3445552  2555555555555444444

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.73  E-value=0.017  Score=32.43  Aligned_cols=20  Identities=30%  Similarity=0.811  Sum_probs=9.5

Q ss_pred             ccCCCCCCccCChHHHHHHH
Q psy5888         231 YACKFCGKVFPRSANLTRHL  250 (447)
Q Consensus       231 ~~C~~Cgk~F~~~~~L~~H~  250 (447)
                      |+|..|...|.++..|+.||
T Consensus         3 ykcsscsqqfmqkkdlqshm   22 (26)
T d2dlqa1           3 YKCSSCSQQFMQKKDLQSHM   22 (26)
T ss_dssp             EECSSSCCEESSHHHHHHHH
T ss_pred             CcccHHHHHHHHHHHHHHHH
Confidence            44444444444444444444

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.48  E-value=0.02  Score=32.07  Aligned_cols=26  Identities=38%  Similarity=0.873  Sum_probs=22.0

Q ss_pred             CcccCCCCCCcccchhhHHHHhhhhc
Q psy5888         257 QPYKCKYCERSFSISSNLQRHVRNIH  282 (447)
Q Consensus       257 kp~~C~~C~k~F~s~~~L~~H~~~~H  282 (447)
                      .||+|..|...|..+..|+.|+-..|
T Consensus         1 mpykcsscsqqfmqkkdlqshmiklh   26 (26)
T d2dlqa1           1 MPYKCSSCSQQFMQKKDLQSHMIKLH   26 (26)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHTS
T ss_pred             CCCcccHHHHHHHHHHHHHHHHHhcC
Confidence            06899999999999999999986433

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.25  E-value=0.018  Score=34.40  Aligned_cols=21  Identities=24%  Similarity=0.822  Sum_probs=10.3

Q ss_pred             CCCCCC--CCcccCCchhHHHHH
Q psy5888         287 PFKCPL--CDRCFGQQTNLDRHL  307 (447)
Q Consensus       287 p~~C~~--C~k~F~~~~~L~~Hl  307 (447)
                      ||.|.+  |.+.|+..++-.+|+
T Consensus         2 PY~C~~~gC~KafsNsSDraKHq   24 (31)
T d2glia4           2 PYMCEHEGCSKAFSNASDRAKHQ   24 (31)
T ss_dssp             CEECCSTTCCCEESSSSTTHHHH
T ss_pred             CccccCCChhhhhcchhhhhhhc
Confidence            444544  555555554444454

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.99  E-value=0.025  Score=32.52  Aligned_cols=21  Identities=38%  Similarity=0.876  Sum_probs=9.7

Q ss_pred             ccCCCCCCccCChHHHHHHHH
Q psy5888         231 YACKFCGKVFPRSANLTRHLR  251 (447)
Q Consensus       231 ~~C~~Cgk~F~~~~~L~~H~r  251 (447)
                      |+|++|+-...++++|..|++
T Consensus         3 ~qcphc~tiiarksdlrvhlr   23 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLR   23 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHH
T ss_pred             ccCCcchhheeehhhhhHHhh
Confidence            444444444444444444444

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=92.91  E-value=0.033  Score=33.07  Aligned_cols=28  Identities=46%  Similarity=1.018  Sum_probs=20.5

Q ss_pred             CCccCCC--CCCccCChHHHHHHHHHhcCC
Q psy5888         229 DRYACKF--CGKVFPRSANLTRHLRTHTGE  256 (447)
Q Consensus       229 k~~~C~~--Cgk~F~~~~~L~~H~r~H~~e  256 (447)
                      ++|.|.+  |+-.|.....|..|+-.|+||
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            4577766  777777777777777777764

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.83  E-value=0.029  Score=32.14  Aligned_cols=23  Identities=39%  Similarity=1.029  Sum_probs=18.1

Q ss_pred             CCCCCCCCcccCCchhHHHHHhh
Q psy5888         287 PFKCPLCDRCFGQQTNLDRHLKK  309 (447)
Q Consensus       287 p~~C~~C~k~F~~~~~L~~Hlr~  309 (447)
                      ||.|..||+.|-++.+|..|...
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            57888888888888888888643

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.69  E-value=0.038  Score=34.85  Aligned_cols=27  Identities=26%  Similarity=0.648  Sum_probs=18.0

Q ss_pred             CCCccCCC--CCCccCChHHHHHHHHHhc
Q psy5888         228 KDRYACKF--CGKVFPRSANLTRHLRTHT  254 (447)
Q Consensus       228 ~k~~~C~~--Cgk~F~~~~~L~~H~r~H~  254 (447)
                      +++|.|..  |+..|.+...|..|...|.
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhhe
Confidence            45677754  7777777777777766663

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.44  E-value=0.042  Score=31.46  Aligned_cols=20  Identities=40%  Similarity=0.836  Sum_probs=10.6

Q ss_pred             ccCCCCCCccCChHHHHHHH
Q psy5888         231 YACKFCGKVFPRSANLTRHL  250 (447)
Q Consensus       231 ~~C~~Cgk~F~~~~~L~~H~  250 (447)
                      |.|..||+.|.++.+|..|.
T Consensus         2 f~c~kcgkcyfrkenllehe   21 (28)
T d2dlqa2           2 FECPKCGKCYFRKENLLEHE   21 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHH
T ss_pred             CccccchhhhhhHhHHHHHH
Confidence            45555555555555555553

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.40  E-value=0.064  Score=30.80  Aligned_cols=25  Identities=28%  Similarity=0.679  Sum_probs=23.0

Q ss_pred             ccCCCCCCcccchhhHHHHhhhhcc
Q psy5888         259 YKCKYCERSFSISSNLQRHVRNIHN  283 (447)
Q Consensus       259 ~~C~~C~k~F~s~~~L~~H~~~~H~  283 (447)
                      |.|+.|+....++++|..|+++.|.
T Consensus         3 ~qcphc~tiiarksdlrvhlrnlhs   27 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRKQHS   27 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             ccCCcchhheeehhhhhHHhhhccc
Confidence            7899999999999999999997774

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=91.14  E-value=0.061  Score=30.66  Aligned_cols=24  Identities=46%  Similarity=0.985  Sum_probs=19.1

Q ss_pred             ccCCC--CCCccCChHHHHHHHHHhc
Q psy5888         231 YACKF--CGKVFPRSANLTRHLRTHT  254 (447)
Q Consensus       231 ~~C~~--Cgk~F~~~~~L~~H~r~H~  254 (447)
                      |.|.+  |++.|.....|+.|+-+|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            66766  8888888888888887775

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=90.73  E-value=0.061  Score=30.17  Aligned_cols=24  Identities=38%  Similarity=0.912  Sum_probs=13.0

Q ss_pred             ccCCCCCCcccchhhHHHHhhhhc
Q psy5888         259 YKCKYCERSFSISSNLQRHVRNIH  282 (447)
Q Consensus       259 ~~C~~C~k~F~s~~~L~~H~~~~H  282 (447)
                      |.|++|-+.|.++.++..|.+.+|
T Consensus         2 ypcp~cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCCchhhHHhccccCceEEEEEec
Confidence            445555555555555555555333

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.60  E-value=0.075  Score=30.58  Aligned_cols=23  Identities=26%  Similarity=0.456  Sum_probs=12.6

Q ss_pred             CCCCCCCcccCCchhHHHHHhhh
Q psy5888         288 FKCPLCDRCFGQQTNLDRHLKKH  310 (447)
Q Consensus       288 ~~C~~C~k~F~~~~~L~~Hlr~H  310 (447)
                      -+|+.|.+...++..|+.|.|+|
T Consensus         3 ekc~ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           3 EKCSECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHGGG
T ss_pred             ccCcccccccCcHHHHHHhhccc
Confidence            34555555555555555555555

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.03  E-value=0.085  Score=34.88  Aligned_cols=25  Identities=28%  Similarity=0.655  Sum_probs=21.4

Q ss_pred             CCCCCCCCcccCCchhHHHHHhhhc
Q psy5888         287 PFKCPLCDRCFGQQTNLDRHLKKHE  311 (447)
Q Consensus       287 p~~C~~C~k~F~~~~~L~~Hlr~H~  311 (447)
                      -|.|..|++.|.....|+.|...|-
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             eeeccccccccCCHHHHhHhHHhcC
Confidence            4789999999999999999988875

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.91  E-value=0.08  Score=32.54  Aligned_cols=16  Identities=31%  Similarity=0.501  Sum_probs=7.7

Q ss_pred             cCCchhHHHHHhhhcC
Q psy5888         297 FGQQTNLDRHLKKHEA  312 (447)
Q Consensus       297 F~~~~~L~~Hlr~H~~  312 (447)
                      |.....|..|+|.|++
T Consensus        17 f~a~YkLv~H~R~HTg   32 (33)
T d2glia2          17 FKAQYMLVVHMRRHTG   32 (33)
T ss_dssp             CSSHHHHHHHTHHHHC
T ss_pred             chhHHHHHHHHhhcCC
Confidence            4444444444444444

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=89.84  E-value=0.073  Score=31.52  Aligned_cols=25  Identities=28%  Similarity=0.765  Sum_probs=13.7

Q ss_pred             CCCCC--CCcccCCchhHHHHHhhhcC
Q psy5888         288 FKCPL--CDRCFGQQTNLDRHLKKHEA  312 (447)
Q Consensus       288 ~~C~~--C~k~F~~~~~L~~Hlr~H~~  312 (447)
                      |.|.+  |+..|.....|..|+-.|+|
T Consensus         4 ~iCsf~dC~A~ynk~wkL~AHLckHTG   30 (31)
T d1tf3a1           4 YICSFADCGAAYNKNWKLQAHLSKHTG   30 (31)
T ss_dssp             EECSSGGGCCEESSHHHHHHHHHHHHC
T ss_pred             eEeeCCCcchhhccchhhhHHhhhhcC
Confidence            55543  55555555555555555554

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.02  E-value=0.19  Score=33.14  Aligned_cols=24  Identities=38%  Similarity=0.789  Sum_probs=17.7

Q ss_pred             CccCCCCCCccCChHHHHHHHHHh
Q psy5888         230 RYACKFCGKVFPRSANLTRHLRTH  253 (447)
Q Consensus       230 ~~~C~~Cgk~F~~~~~L~~H~r~H  253 (447)
                      .|.|-.|+|.|.....|+.|..-|
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQH   29 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQH   29 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHH
T ss_pred             eeeccccccccCCHHHHhHhHHhc
Confidence            467777777777777777777665

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.44  E-value=0.25  Score=28.66  Aligned_cols=24  Identities=25%  Similarity=0.664  Sum_probs=16.7

Q ss_pred             ccCCCCCCccCChHHHHHHHHHhc
Q psy5888         231 YACKFCGKVFPRSANLTRHLRTHT  254 (447)
Q Consensus       231 ~~C~~Cgk~F~~~~~L~~H~r~H~  254 (447)
                      |.|.+|||...+...++-|+...+
T Consensus         3 ftc~hcgkqlks~~gmkyhvmadh   26 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVMANH   26 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHHHT
T ss_pred             eechhHHHHHhhccCceEEEeecc
Confidence            677777777777777777766433

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.03  E-value=0.11  Score=31.61  Aligned_cols=25  Identities=24%  Similarity=0.682  Sum_probs=16.5

Q ss_pred             CCCCCCCCcccCCchhHHHHHhhhc
Q psy5888         287 PFKCPLCDRCFGQQTNLDRHLKKHE  311 (447)
Q Consensus       287 p~~C~~C~k~F~~~~~L~~Hlr~H~  311 (447)
                      .|.|..|++.|.++..+.+|.....
T Consensus         4 afvcskcgktftrrntm~rha~nc~   28 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCA   28 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCC
T ss_pred             eeeecccccchhcchHHHHHhhhcC
Confidence            3667777777777777777765443

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.18  E-value=0.2  Score=28.73  Aligned_cols=20  Identities=40%  Similarity=0.610  Sum_probs=10.1

Q ss_pred             cCCCCCCcccchhhHHHHhh
Q psy5888         260 KCKYCERSFSISSNLQRHVR  279 (447)
Q Consensus       260 ~C~~C~k~F~s~~~L~~H~~  279 (447)
                      +|..|.....++..|+.|.+
T Consensus         4 kc~ecsyscsskaalrvh~r   23 (28)
T d1x5wa1           4 KCSECSYSCSSKAALRIHER   23 (28)
T ss_dssp             ECSSSSCEESSHHHHHHHHG
T ss_pred             cCcccccccCcHHHHHHhhc
Confidence            45555555555555555544

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=87.07  E-value=0.21  Score=30.13  Aligned_cols=19  Identities=32%  Similarity=0.782  Sum_probs=7.9

Q ss_pred             ccCCCCCCccCChHHHHHH
Q psy5888         231 YACKFCGKVFPRSANLTRH  249 (447)
Q Consensus       231 ~~C~~Cgk~F~~~~~L~~H  249 (447)
                      |.|.-||..|.+.+.|..|
T Consensus         9 f~c~pcgirfss~stleah   27 (36)
T d1y0jb1           9 FMCLPCGIAFSSPSTLEAH   27 (36)
T ss_dssp             CBCTTTCCBCSCHHHHHHH
T ss_pred             eeccccceeecChhHHHhh
Confidence            4444444444444444443

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.72  E-value=0.21  Score=30.42  Aligned_cols=26  Identities=35%  Similarity=0.833  Sum_probs=18.5

Q ss_pred             CccCCCCCCccCChHHHHHHHHHhcC
Q psy5888         230 RYACKFCGKVFPRSANLTRHLRTHTG  255 (447)
Q Consensus       230 ~~~C~~Cgk~F~~~~~L~~H~r~H~~  255 (447)
                      .|.|..|||.|.+...+.+|...-.|
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            37788888888888777777665443

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.97  E-value=0.27  Score=28.26  Aligned_cols=22  Identities=41%  Similarity=0.913  Sum_probs=16.8

Q ss_pred             cCCC--CCCccCChHHHHHHHHHh
Q psy5888         232 ACKF--CGKVFPRSANLTRHLRTH  253 (447)
Q Consensus       232 ~C~~--Cgk~F~~~~~L~~H~r~H  253 (447)
                      .|+.  |+|.|...+.++.|+-+|
T Consensus         3 ~CphkgC~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           3 ACPHKGCTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             ECCSTTCCCEESSHHHHHHHHGGG
T ss_pred             cCCcccHHHHhhchHHHHHHhhcc
Confidence            3555  888888888888887766

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=84.40  E-value=0.29  Score=32.12  Aligned_cols=27  Identities=41%  Similarity=0.808  Sum_probs=15.7

Q ss_pred             CCCCCCCCCCcccCCchhHHHHHhhhc
Q psy5888         285 EKPFKCPLCDRCFGQQTNLDRHLKKHE  311 (447)
Q Consensus       285 ~kp~~C~~C~k~F~~~~~L~~Hlr~H~  311 (447)
                      +.|-.|++|+.......+|.+|+...|
T Consensus        22 ~qpatcpic~avirqsrnlrrhlel~h   48 (54)
T d1yuja_          22 EQPATCPICYAVIRQSRNLRRHLELRH   48 (54)
T ss_dssp             SCCEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             cCCCCCchHHHHHHHHHHHHHHHHHHh
Confidence            345556666666666666666665533

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.49  E-value=0.28  Score=34.60  Aligned_cols=36  Identities=14%  Similarity=0.510  Sum_probs=21.3

Q ss_pred             CCccCCCCCCccCChHHHHHHHHHhcCCCcccCCCCCCc
Q psy5888         229 DRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERS  267 (447)
Q Consensus       229 k~~~C~~Cgk~F~~~~~L~~H~r~H~~ekp~~C~~C~k~  267 (447)
                      .-|.|+.|++.|.....+   ...--...-|.|.+|+..
T Consensus        13 ~~y~Cp~C~~~ys~Lda~---~L~d~~~~~F~C~~C~~e   48 (62)
T d1vd4a_          13 ASFKCPVCSSTFTDLEAN---QLFDPMTGTFRCTFCHTE   48 (62)
T ss_dssp             SEEECSSSCCEEEHHHHH---HHEETTTTEEBCSSSCCB
T ss_pred             CceECCCCCCCcchhhHH---HhcCcCCCeEEecCCCCE
Confidence            458888888887744332   222223345778888654

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=81.22  E-value=0.49  Score=28.44  Aligned_cols=23  Identities=30%  Similarity=0.548  Sum_probs=20.9

Q ss_pred             CcccCCCCCCcccchhhHHHHhh
Q psy5888         257 QPYKCKYCERSFSISSNLQRHVR  279 (447)
Q Consensus       257 kp~~C~~C~k~F~s~~~L~~H~~  279 (447)
                      ..|.|.-||-+|.+.+.|..|+.
T Consensus         7 arf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           7 ARFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCCBCTTTCCBCSCHHHHHHHTT
T ss_pred             cceeccccceeecChhHHHhhhh
Confidence            46999999999999999999975