Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
ID Alignment Graph Length
Definition
E-value Query 103
cd03085 548
cd03085, PGM1, Phosphoglucomutase 1 (PGM1) catalyz
4e-53 PLN02307 579
PLN02307, PLN02307, phosphoglucomutase
2e-41 COG0033 524
COG0033, Pgm, Phosphoglucomutase [Carbohydrate tra
1e-23 PRK07564 543
PRK07564, PRK07564, phosphoglucomutase; Validated
5e-23 COG1109 464
COG1109, {ManB}, Phosphomannomutase [Carbohydrate
1e-10 cd03084 355
cd03084, phosphohexomutase, The alpha-D-phosphohex
2e-09 cd05800 461
cd05800, PGM_like2, This PGM-like (phosphoglucomut
2e-09 pfam02879 103
pfam02879, PGM_PMM_II, Phosphoglucomutase/phosphom
2e-09 cd03089 443
cd03089, PMM_PGM, The phosphomannomutase/phosphogl
2e-05 TIGR03990 443
TIGR03990, Arch_GlmM, phosphoglucosamine mutase
3e-04
>gnl|CDD|100087 cd03085, PGM1, Phosphoglucomutase 1 (PGM1) catalyzes the bidirectional interconversion of glucose-1-phosphate (G-1-P) and glucose-6-phosphate (G-6-P) via a glucose 1,6-diphosphate intermediate, an important metabolic step in prokaryotes and eukaryotes
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Score = 173 bits (441), Expect = 4e-53
Identities = 62/101 (61%), Positives = 74/101 (73%), Gaps = 4/101 (3%)
Query: 2 VDGAQFQVDVIDSVEVYLQLMKEIFDFPKLQSLIKGSSGRPPFKLLINSMHGVTGPYVKK 61
G F V+VIDSVE Y++LMKEIFDF ++ L+ R FK+ ++MHGVTGPY KK
Sbjct: 170 FGGKPFTVEVIDSVEDYVELMKEIFDFDAIKKLLS----RKGFKVRFDAMHGVTGPYAKK 225
Query: 62 IFLEELGAQPDNAVNTTPLPDFGGHHPDPNLTYAADLVQAM 102
IF+EELGA + VN TPLPDFGG HPDPNLTYA DLV+ M
Sbjct: 226 IFVEELGAPESSVVNCTPLPDFGGGHPDPNLTYAKDLVELM 266
In one direction, G-1-P produced from sucrose catabolism is converted to G-6-P, the first intermediate in glycolysis. In the other direction, conversion of G-6-P to G-1-P generates a substrate for synthesis of UDP-glucose which is required for synthesis of a variety of cellular constituents including cell wall polymers and glycoproteins. The PGM1 family also includes a non-enzymatic PGM-related protein (PGM-RP) thought to play a structural role in eukaryotes, as well as pp63/parafusin, a phosphoglycoprotein that plays an important role in calcium-regulated exocytosis in ciliated protozoans. PGM1 belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model. Length = 548
>gnl|CDD|177942 PLN02307, PLN02307, phosphoglucomutase
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Score = 142 bits (360), Expect = 2e-41
Identities = 52/97 (53%), Positives = 66/97 (68%), Gaps = 4/97 (4%)
Query: 6 QFQVDVIDSVEVYLQLMKEIFDFPKLQSLIKGSSGRPPFKLLINSMHGVTGPYVKKIFLE 65
F V+VID VE Y++LMK IFDF ++ L+ RP F ++MHGVTG Y K+IF+E
Sbjct: 191 DFDVEVIDPVEDYVKLMKSIFDFELIKKLLS----RPDFTFCFDAMHGVTGAYAKRIFVE 246
Query: 66 ELGAQPDNAVNTTPLPDFGGHHPDPNLTYAADLVQAM 102
ELGA + +N P DFGG HPDPNLTYA +LV+ M
Sbjct: 247 ELGAPESSLLNCVPKEDFGGGHPDPNLTYAKELVKRM 283
>gnl|CDD|223111 COG0033, Pgm, Phosphoglucomutase [Carbohydrate transport and metabolism]
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Score = 92.8 bits (231), Expect = 1e-23
Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 9 VDVIDSVEVYLQLMKEIFDFPKLQSLIKGSSGRPPFKLLINSMHGVTGPYVKKIFLEELG 68
V +ID V+ Y++L++EIFDF ++ +L + + GVTGPY K I + L
Sbjct: 178 VKIIDPVKDYVELLEEIFDFDAIRKAGL--------RLGFDPLGGVTGPYWKAIAEKYLL 229
Query: 69 AQPDNAVNTTPLPDFGGHHPDPNLTYAADLVQAM 102
N P PDF G PD N+ AM
Sbjct: 230 NLTGVNQNVDPTPDFMGLDPDGNIRMDCSSPCAM 263
>gnl|CDD|236050 PRK07564, PRK07564, phosphoglucomutase; Validated
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Score = 91.4 bits (228), Expect = 5e-23
Identities = 32/103 (31%), Positives = 48/103 (46%), Gaps = 15/103 (14%)
Query: 4 GAQFQVDVIDSVEVYLQLMKEIFDFPKLQSLIKGSSGRPPFKLLINSMHGVTGPYVKKIF 63
A V+VID V Y++ ++ +FDF ++ +G +L ++ + G TGPY K I
Sbjct: 195 LASMTVEVIDPVADYVEDLENVFDFDAIRK-----AG---LRLGVDPLGGATGPYWKAIA 246
Query: 64 ------LEELGAQPDNAVNTTPLPDFGGHHPDPNLTYA-ADLV 99
L + A D N PL D G D + YA A L+
Sbjct: 247 ERYGLDLTVVNAPVDPTFNFMPLDDDGKIRMDCSSPYAMAGLL 289
>gnl|CDD|224034 COG1109, {ManB}, Phosphomannomutase [Carbohydrate transport and metabolism]
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Score = 55.8 bits (135), Expect = 1e-10
Identities = 21/95 (22%), Positives = 45/95 (47%), Gaps = 11/95 (11%)
Query: 9 VDVIDSVEVYLQLMKEIFDFPKLQSLIKGSSGRPPFKLLINSMHGVTGPYVKKIFLEELG 68
+ D+++ Y++ +K + D K++++ +G G ++ L+ELG
Sbjct: 153 KRIPDALDRYIEFIKSLVDVDLKLR---------GLKVVVDCANGAAGLVAPRL-LKELG 202
Query: 69 AQPDNAVNTTPLPDFGGHHPDPNLTYAADLVQAMQ 103
A+ + +N P F +P+P T DL +A++
Sbjct: 203 AEVVS-INCDPDGLFPNINPNPGETELLDLAKAVK 236
>gnl|CDD|100086 cd03084, phosphohexomutase, The alpha-D-phosphohexomutase superfamily includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates
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Score = 52.7 bits (127), Expect = 2e-09
Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 14/97 (14%)
Query: 4 GAQFQVDVIDSVEVYLQLMKEIFDFPKLQSLIKGSSGRPPFKLLINSMHGVTGPYVKKIF 63
G+ VD++ Y + +K++FD + + FK++++S++GV GP ++
Sbjct: 84 GSVKAVDILQR---YFEALKKLFDV----AALSNK----KFKVVVDSVNGVGGPIAPQLL 132
Query: 64 LEELGAQPDNAVNTTPLPDFGGHHPDPN-LTYAADLV 99
E+LGA +N P +FG +PDP T L+
Sbjct: 133 -EKLGA-EVIPLNCEPDGNFGNINPDPGSETNLKQLL 167
Members of this family include the phosphoglucomutases (PGM1 and PGM2), phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). These enzymes play important and diverse roles in carbohydrate metabolism in organisms from bacteria to humans. Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model. Length = 355
>gnl|CDD|100093 cd05800, PGM_like2, This PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the alpha-D-phosphohexomutase superfamily and is found in both archaea and bacteria
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Score = 52.6 bits (127), Expect = 2e-09
Identities = 21/102 (20%), Positives = 46/102 (45%), Gaps = 10/102 (9%)
Query: 1 MVDGAQFQVDVIDSVEVYLQLMKEIFDFPKLQSLIKGSSGRPPFKLLINSMHGVTGPYVK 60
+ A+ ++ ID YL+ ++ + D I+ + K++++ M+G Y++
Sbjct: 139 LEARAEGLIETIDPKPDYLEALRSLVDL----EAIREAGL----KVVVDPMYGAGAGYLE 190
Query: 61 KIFLEELGAQPDNAVNTTPLPDFGGHHPDPNLTYAADLVQAM 102
++ L G + + P FGG P+P +L +A+
Sbjct: 191 EL-LRGAGVDVE-EIRAERDPLFGGIPPEPIEKNLGELAEAV 230
The alpha-D-phosphohexomutases include several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four structural domains (subdomains) with a centrally located active site formed by four loops, one from each subdomain. All four subdomains are included in this alignment model. Length = 461
>gnl|CDD|217264 pfam02879, PGM_PMM_II, Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
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Score = 50.0 bits (120), Expect = 2e-09
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 14/90 (15%)
Query: 16 EVYLQLMKEIFDFPKLQSLIKGSSGRPPFKLLINSMHGVTGPYVKKIFLEELGAQPDNAV 75
+ Y+ + FD L+ + K++ + +HGV G + ++ L+ LGA+ +
Sbjct: 1 DAYIDRLASAFDLEALK--------KRGLKVVYDPLHGVGGEILPEL-LKRLGAEV-VEL 50
Query: 76 NTTPLPDFGGHHPDP----NLTYAADLVQA 101
N P DF P+P L +LV+
Sbjct: 51 NCEPDGDFPTKAPNPEEPEALELLIELVKE 80
>gnl|CDD|100091 cd03089, PMM_PGM, The phosphomannomutase/phosphoglucomutase (PMM/PGM) bifunctional enzyme catalyzes the reversible conversion of 1-phospho to 6-phospho-sugars (e
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Score = 41.0 bits (97), Expect = 2e-05
Identities = 23/102 (22%), Positives = 41/102 (40%), Gaps = 20/102 (19%)
Query: 4 GAQFQVDVIDSVEVYLQLMKEIFDFPKLQSLIKGSSGRPPFKLLINSMHGVTGPYVKKIF 63
G+ +VD++ Y+ + G+ P K+++++ +G GP ++
Sbjct: 138 GSVEKVDIL---PDYIDRLLSDIKL-----------GKRPLKVVVDAGNGAAGPIAPQLL 183
Query: 64 LEELGAQPDNAVNTTPLPDFGGHHPDP----NLTYAADLVQA 101
E LG + + P F HHPDP NL V+
Sbjct: 184 -EALGCEVI-PLFCEPDGTFPNHHPDPTDPENLEDLIAAVKE 223
g. between mannose-1-phosphate and mannose-6-phosphate or glucose-1-phosphate and glucose-6-phosphate) via a bisphosphorylated sugar intermediate. The reaction involves two phosphoryl transfers, with an intervening 180 degree reorientation of the reaction intermediate during catalysis. Reorientation of the intermediate occurs without dissociation from the active site of the enzyme and is thus, a simple example of processivity, as defined by multiple rounds of catalysis without release of substrate. Glucose-6-phosphate and glucose-1-phosphate are known to be utilized for energy metabolism and cell surface construction, respectively. PMM/PGM belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the phosphoglucomutases (PGM1 and PGM2). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model. Length = 443
>gnl|CDD|234431 TIGR03990, Arch_GlmM, phosphoglucosamine mutase
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Score = 37.9 bits (89), Expect = 3e-04
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 11/65 (16%)
Query: 43 PFKLLI---NSMHGVTGPYVKKIFLEELGAQPDNAVNTTPLPDFGGHHPDP---NLTYAA 96
FK+++ N +T PY+ L ELG + +N P F G +P+P NL +
Sbjct: 169 GFKVVVDCGNGAGSLTTPYL----LRELGCKVI-TLNCQPDGTFPGRNPEPTPENLKDLS 223
Query: 97 DLVQA 101
LV+A
Sbjct: 224 ALVKA 228
The MMP1680 protein from Methanococcus maripaludis has been characterized as the archaeal protein responsible for the second step of UDP-GlcNAc biosynthesis. This GlmM protein catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate. The first-characterized bacterial GlmM protein is modeled by TIGR01455. These two families are members of the larger phosphoglucomutase/phosphomannomutase family (characterized by three domains: pfam02878, pfam02879 and pfam02880), but are not nearest neighbors to each other. This model also includes a number of sequences from non-archaea in the Bacteroides, Chlorobi, Chloroflexi, Planctomycetes and Spirochaetes lineages. Evidence supporting their inclusion in this equivalog as having the same activity comes from genomic context and phylogenetic profiling. A large number of these organisms are known to produce exo-polysaccharide and yet only appeared to contain the GlmS enzyme of the GlmSMU pathway for UDP-GlcNAc biosynthesis (GenProp0750). In some organisms including Leptospira, this archaeal GlmM is found adjacent to the GlmS as well as a putative GlmU non-orthologous homolog. Phylogenetic profiling of the GlmS-only pattern using PPP identifies members of this archaeal GlmM family as the highest-scoring result [Central intermediary metabolism, Amino sugars]. Length = 443
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
ID Alignment Graph Length
Definition
Probability Query
103
PF02879 104
PGM_PMM_II: Phosphoglucomutase/phosphomannomutase,
99.82 cd05800 461
PGM_like2 This PGM-like (phosphoglucomutase-like)
99.77 PRK09542 445
manB phosphomannomutase/phosphoglucomutase; Review
99.76 cd03085 548
PGM1 Phosphoglucomutase 1 (PGM1) catalyzes the bid
99.76 cd03084 355
phosphohexomutase The alpha-D-phosphohexomutase su
99.75 KOG0625|consensus 558
99.74 PRK15414 456
phosphomannomutase CpsG; Provisional
99.72 PLN02307 579
phosphoglucomutase
99.72 cd03087 439
PGM_like1 This archaeal PGM-like (phosphoglucomuta
99.72 cd03089 443
PMM_PGM The phosphomannomutase/phosphoglucomutase
99.72 PLN02371 583
phosphoglucosamine mutase family protein
99.7 cd05803 445
PGM_like4 This PGM-like (phosphoglucomutase-like)
99.7 PRK14321 449
glmM phosphoglucosamine mutase; Provisional
99.67 COG1109 464
{ManB} Phosphomannomutase [Carbohydrate transport
99.67 cd05801 522
PGM_like3 This bacterial PGM-like (phosphoglucomut
99.66 TIGR01132 543
pgm phosphoglucomutase, alpha-D-glucose phosphate-
99.66 cd05799 487
PGM2 This CD includes PGM2 (phosphoglucomutase 2)
99.62 PRK07564 543
phosphoglucomutase; Validated
99.62 PRK14315 448
glmM phosphoglucosamine mutase; Provisional
99.61 PRK14317 465
glmM phosphoglucosamine mutase; Provisional
99.61 PRK10887 443
glmM phosphoglucosamine mutase; Provisional
99.6 cd05805 441
MPG1_transferase GTP-mannose-1-phosphate guanyltra
99.6 cd05802 434
GlmM GlmM is a bacterial phosphoglucosamine mutase
99.6 PRK14324 446
glmM phosphoglucosamine mutase; Provisional
99.59 PRK14314 450
glmM phosphoglucosamine mutase; Provisional
99.57 TIGR01455 443
glmM phosphoglucosamine mutase. This model describ
99.56 PTZ00150 584
phosphoglucomutase-2-like protein; Provisional
99.55 PRK14316 448
glmM phosphoglucosamine mutase; Provisional
99.53 PRK14318 448
glmM phosphoglucosamine mutase; Provisional
99.53 PRK14320 443
glmM phosphoglucosamine mutase; Provisional
99.52 PRK14322 429
glmM phosphoglucosamine mutase; Provisional
99.51 PRK14319 430
glmM phosphoglucosamine mutase; Provisional
99.5 PRK14323 440
glmM phosphoglucosamine mutase; Provisional
99.5 cd03088 459
ManB ManB is a bacterial phosphomannomutase (PMM)
99.44 cd03086 513
PGM3 PGM3 (phosphoglucomutase 3), also known as PA
99.39 COG0033 524
Pgm Phosphoglucomutase [Carbohydrate transport and
99.26 KOG1220|consensus 607
98.63 PTZ00302 585
N-acetylglucosamine-phosphate mutase; Provisional
98.55 PLN02895 562
phosphoacetylglucosamine mutase
98.48 KOG2537|consensus 539
84.8 PRK13396 352
3-deoxy-7-phosphoheptulonate synthase; Provisional
84.15 PRK08673 335
3-deoxy-7-phosphoheptulonate synthase; Reviewed
81.94
>PF02879 PGM_PMM_II: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; InterPro: IPR005845 The alpha-D-phosphohexomutase superfamily is composed of four related enzymes, each of which catalyses a phosphoryl transfer on their sugar substrates: phosphoglucomutase (PGM), phosphoglucomutase/phosphomannomutase (PGM/PMM), phosphoglucosamine mutase (PNGM), and phosphoacetylglucosamine mutase (PAGM) []
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Probab=99.82 E-value=3.8e-20 Score=121.14 Aligned_cols=77 Identities=22% Similarity=0.496 Sum_probs=69.1
Q ss_pred HHHHHHHHhhcC-chhHHhhhhCCCCCCCcEEEEeCCCCcchHHHHHHHHHhcCCCceeeecCccCCCCCC-CCCCCcHH
Q psy5980 16 EVYLQLMKEIFD-FPKLQSLIKGSSGRPPFKLLINSMHGVTGPYVKKIFLEELGAQPDNAVNTTPLPDFGG-HHPDPNLT 93 (103)
Q Consensus 16 ~~Yi~~l~~~id-~~~i~~~~~~~~~~~~lkVvvD~~nGa~~~~~~~ll~~~lG~~~v~~i~~~~Dg~F~g-~~PeP~~~ 93 (103)
+.|+++|.+.++ .+.+++. ++||+||||||+|+.+++.+|+ ++|++ ++.+|+.+||.||+ +.|+|.++
T Consensus 1 e~Y~~~l~~~~~~~~~~~~~--------~~kivvD~~~G~~~~~~~~ll~-~lg~~-~~~~n~~~d~~f~~~~~p~p~~~ 70 (104)
T PF02879_consen 1 EAYIESLLSFIDILEAIKKS--------GLKIVVDCMNGAGSDILPRLLE-RLGCD-VIELNCDPDPDFPNQHAPNPEEE 70 (104)
T ss_dssp HHHHHHHHHTSCHHHHHHHT--------TCEEEEE-TTSTTHHHHHHHHH-HTTCE-EEEESSS-STTGTTTSTSSTSTT
T ss_pred ChHHHHHhhhccchhhcccC--------CCEEEEECCCCHHHHHHHHHHH-HcCCc-EEEEecccccccccccccccccc
Confidence 589999999999 8888765 8999999999999999999999 99995 88999999999999 99999989
Q ss_pred HHHHHHHhh
Q psy5980 94 YAADLVQAM 102 (103)
Q Consensus 94 nL~~L~~~V 102 (103)
++..+++.|
T Consensus 71 ~l~~~~~~v 79 (104)
T PF02879_consen 71 SLQRLIKIV 79 (104)
T ss_dssp TTHHHHHHH
T ss_pred hhHHHHHHh
Confidence 999988776
PGM (5.4.2.2 from EC) converts D-glucose 1-phosphate into D-glucose 6-phosphate, and participates in both the breakdown and synthesis of glucose []. PGM/PMM (5.4.2.2 from EC; 5.4.2.8 from EC) are primarily bacterial enzymes that use either glucose or mannose as substrate, participating in the biosynthesis of a variety of carbohydrates such as lipopolysaccharides and alginate [, ]. Both PNGM (5.4.2.3 from EC) and PAGM (5.4.2.10 from EC) are involved in the biosynthesis of UDP-N-acetylglucosamine [, ]. Despite differences in substrate specificity, these enzymes share a similar catalytic mechanism, converting 1-phospho-sugars to 6-phospho-sugars via a biphosphorylated 1,6-phospho-sugar. The active enzyme is phosphorylated at a conserved serine residue and binds one magnesium ion; residues around the active site serine are well conserved among family members. The reaction mechanism involves phosphoryl transfer from the phosphoserine to the substrate to create a biophosphorylated sugar, followed by a phosphoryl transfer from the substrate back to the enzyme []. The structures of PGM and PGM/PMM have been determined, and were found to be very similar in topology. These enzymes are both composed of four domains and a large central active site cleft, where each domain contains residues essential for catalysis and/or substrate recognition. Domain I contains the catalytic phosphoserine, domain II contains a metal-binding loop to coordinate the magnesium ion, domain III contains the sugar-binding loop that recognises the two different binding orientations of the 1- and 6-phospho-sugars, and domain IV contains a phosphate-binding site required for orienting the incoming phospho-sugar substrate. This entry represents domain II found in alpha-D-phosphohexomutase enzymes. This domain has a 3-layer alpha/beta/alpha topology.; GO: 0016868 intramolecular transferase activity, phosphotransferases, 0005975 carbohydrate metabolic process; PDB: 2F7L_A 3PDK_B 1KFQ_B 1KFI_A 1C47_A 1VKL_B 1LXT_A 1JDY_B 3PMG_A 1C4G_B ....
>cd05800 PGM_like2 This PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the alpha-D-phosphohexomutase superfamily and is found in both archaea and bacteria
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Probab=99.77 E-value=1.9e-18 Score=137.79 Aligned_cols=88 Identities=20% Similarity=0.441 Sum_probs=79.9
Q ss_pred ceeEEEecChHHHHHHHHhhcCchhHHhhhhCCCCCCCcEEEEeCCCCcchHHHHHHHHHhcCCCceeeecCccCCCCCC
Q psy5980 6 QFQVDVIDSVEVYLQLMKEIFDFPKLQSLIKGSSGRPPFKLLINSMHGVTGPYVKKIFLEELGAQPDNAVNTTPLPDFGG 85 (103)
Q Consensus 6 ~g~~~~~D~~~~Yi~~l~~~id~~~i~~~~~~~~~~~~lkVvvD~~nGa~~~~~~~ll~~~lG~~~v~~i~~~~Dg~F~g 85 (103)
.|.+...|..+.|+++|.+.+|.++|+.. ++|||+||+||+++.+++.+|+ +|||+ ++.+|+++||.||+
T Consensus 144 ~g~i~~~~~~~~Y~~~l~~~~~~~~i~~~--------~~kivvd~~~G~~~~~~~~il~-~lg~~-v~~~~~~~dg~F~~ 213 (461)
T cd05800 144 EGLIETIDPKPDYLEALRSLVDLEAIREA--------GLKVVVDPMYGAGAGYLEELLR-GAGVD-VEEIRAERDPLFGG 213 (461)
T ss_pred CCceeecCCHHHHHHHHHHHhChhhhhcC--------CceEEEeCCCCCcHHHHHHHHH-HcCCC-EEEeeCCcCCCCCC
Confidence 36677779999999999999998777644 7999999999999999999999 99995 89999999999999
Q ss_pred CCCCCcHHHHHHHHHhhC
Q psy5980 86 HHPDPNLTYAADLVQAMQ 103 (103)
Q Consensus 86 ~~PeP~~~nL~~L~~~V~ 103 (103)
++|+|.+++|.+|++.|+
T Consensus 214 ~~p~p~~~~l~~l~~~v~ 231 (461)
T cd05800 214 IPPEPIEKNLGELAEAVK 231 (461)
T ss_pred CCCCCCHHHHHHHHHHHH
Confidence 999999999999998874
The alpha-D-phosphohexomutases include several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four structural domains (subdomains) with a centrally located active site formed by four loops, one from each subdomain. All four subdomains are included in this alignment model.
>PRK09542 manB phosphomannomutase/phosphoglucomutase; Reviewed
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Probab=99.76 E-value=1.6e-18 Score=138.11 Aligned_cols=87 Identities=17% Similarity=0.241 Sum_probs=78.0
Q ss_pred CceeEEEecChHHHHHHHHhhcCchhHHhhhhCCCCCCCcEEEEeCCCCcchHHHHHHHHHhcCCCceeeecCccCCCCC
Q psy5980 5 AQFQVDVIDSVEVYLQLMKEIFDFPKLQSLIKGSSGRPPFKLLINSMHGVTGPYVKKIFLEELGAQPDNAVNTTPLPDFG 84 (103)
Q Consensus 5 ~~g~~~~~D~~~~Yi~~l~~~id~~~i~~~~~~~~~~~~lkVvvD~~nGa~~~~~~~ll~~~lG~~~v~~i~~~~Dg~F~ 84 (103)
+.|.+...|+.+.|+++|++.+|.++++ ++|||+|||||+++.+++.+|+ +|||+ ++.+|+++||.||
T Consensus 136 ~~g~~~~~~~~~~Y~~~l~~~i~~~~i~----------~lkVvvd~~~Ga~~~~~~~ll~-~lg~~-vv~~~~~~d~~Fp 203 (445)
T PRK09542 136 PPGTVTERDVLADYAAFLRSLVDLSGIR----------PLKVAVDAGNGMGGHTVPAVLG-GLPIT-LLPLYFELDGTFP 203 (445)
T ss_pred CCCceeccChHHHHHHHHHHhcccccCC----------CCEEEEECCCCchhHHHHHHHH-hCCCE-EEEEecCcCCCCC
Confidence 4577777799999999999999876552 6999999999999999999999 99995 8899999999999
Q ss_pred CCCCCCc-HHHHHHHHHhhC
Q psy5980 85 GHHPDPN-LTYAADLVQAMQ 103 (103)
Q Consensus 85 g~~PeP~-~~nL~~L~~~V~ 103 (103)
+++|||. +++|.+|++.|+
T Consensus 204 ~~~p~P~~~~~l~~l~~~v~ 223 (445)
T PRK09542 204 NHEANPLDPANLVDLQAFVR 223 (445)
T ss_pred CCCcCCCCHHHHHHHHHHHH
Confidence 9999997 799999998774
>cd03085 PGM1 Phosphoglucomutase 1 (PGM1) catalyzes the bidirectional interconversion of glucose-1-phosphate (G-1-P) and glucose-6-phosphate (G-6-P) via a glucose 1,6-diphosphate intermediate, an important metabolic step in prokaryotes and eukaryotes
Back Show alignment and domain information
Probab=99.76 E-value=4e-18 Score=139.41 Aligned_cols=89 Identities=65% Similarity=1.107 Sum_probs=75.9
Q ss_pred EEecChHHHHHHHHhhcCchhHHhhh-hCCCCCCCcEEEEeCCCCcchHHHHHHHHHhcCCCceeeecCccCCCCCCCCC
Q psy5980 10 DVIDSVEVYLQLMKEIFDFPKLQSLI-KGSSGRPPFKLLINSMHGVTGPYVKKIFLEELGAQPDNAVNTTPLPDFGGHHP 88 (103)
Q Consensus 10 ~~~D~~~~Yi~~l~~~id~~~i~~~~-~~~~~~~~lkVvvD~~nGa~~~~~~~ll~~~lG~~~v~~i~~~~Dg~F~g~~P 88 (103)
+..|..+.|+++|++.+|.++|++.. .+ ++|||+|||||+++.+++.+|++++||+.++.+|++|||.||+++|
T Consensus 178 ~~~d~~~~Yi~~l~~~v~~~~i~~~~~~~-----~lkVVvD~~nGag~~~~~~lL~~~LG~~~v~~i~~~pDg~Fp~~~P 252 (548)
T cd03085 178 EVIDSVEDYVELMKEIFDFDAIKKLLSRK-----GFKVRFDAMHGVTGPYAKKIFVEELGAPESSVVNCTPLPDFGGGHP 252 (548)
T ss_pred EEecCHHHHHHHHHhhhCHHHHhhhcccC-----CCEEEEeCCcchhHHHHHHHHHHhcCCCceEEEeCeeCCCCCCCCC
Confidence 44688999999999999987776310 01 7999999999999999999995379996346899999999999999
Q ss_pred CCcHHHHHHHHHhhC
Q psy5980 89 DPNLTYAADLVQAMQ 103 (103)
Q Consensus 89 eP~~~nL~~L~~~V~ 103 (103)
+|.+++|.+|++.|+
T Consensus 253 ~P~~~~l~~L~~~V~ 267 (548)
T cd03085 253 DPNLTYAKDLVELMK 267 (548)
T ss_pred CCcHHHHHHHHHHHh
Confidence 999999999998874
In one direction, G-1-P produced from sucrose catabolism is converted to G-6-P, the first intermediate in glycolysis. In the other direction, conversion of G-6-P to G-1-P generates a substrate for synthesis of UDP-glucose which is required for synthesis of a variety of cellular constituents including cell wall polymers and glycoproteins. The PGM1 family also includes a non-enzymatic PGM-related protein (PGM-RP) thought to play a structural role in eukaryotes, as well as pp63/parafusin, a phosphoglycoprotein that plays an important role in calcium-regulated exocytosis in ciliated protozoans. PGM1 belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl t
>cd03084 phosphohexomutase The alpha-D-phosphohexomutase superfamily includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates
Back Show alignment and domain information
Probab=99.75 E-value=6.2e-18 Score=130.83 Aligned_cols=85 Identities=31% Similarity=0.608 Sum_probs=77.1
Q ss_pred EEEecChHHHHHHHHhhcCchhHHhhhhCCCCCCCcEEEEeCCCCcchHHHHHHHHHhcCCCceeeecCccCCCCCCCCC
Q psy5980 9 VDVIDSVEVYLQLMKEIFDFPKLQSLIKGSSGRPPFKLLINSMHGVTGPYVKKIFLEELGAQPDNAVNTTPLPDFGGHHP 88 (103)
Q Consensus 9 ~~~~D~~~~Yi~~l~~~id~~~i~~~~~~~~~~~~lkVvvD~~nGa~~~~~~~ll~~~lG~~~v~~i~~~~Dg~F~g~~P 88 (103)
+...|+.+.|+++|.+.+|.+.|+.. ++|||+||+||+++.+++.+|+ ++||+ ++.+|+.+||.||+++|
T Consensus 86 ~~~~~~~~~Y~~~l~~~i~~~~i~~~--------~~kvvvD~~~G~~~~~~~~ll~-~lg~~-v~~~n~~~d~~F~~~~p 155 (355)
T cd03084 86 VKAVDILQRYFEALKKLFDVAALSNK--------KFKVVVDSVNGVGGPIAPQLLE-KLGAE-VIPLNCEPDGNFGNINP 155 (355)
T ss_pred EEEcCCHHHHHHHHHHhcChhhhccC--------CCEEEEECCCchHHHHHHHHHH-HcCCc-EEEEcCcCCCCCCCCCC
Confidence 34678899999999999998777654 7999999999999999999999 99995 89999999999999999
Q ss_pred CCc-HHHHHHHHHhhC
Q psy5980 89 DPN-LTYAADLVQAMQ 103 (103)
Q Consensus 89 eP~-~~nL~~L~~~V~ 103 (103)
||. +++|++|.+.|+
T Consensus 156 ~p~~~~~l~~l~~~v~ 171 (355)
T cd03084 156 DPGSETNLKQLLAVVK 171 (355)
T ss_pred CCCchhhHHHHHHHHH
Confidence 999 799999998874
Members of this family include the phosphoglucomutases (PGM1 and PGM2), phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). These enzymes play important and diverse roles in carbohydrate metabolism in organisms from bacteria to humans. Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.
>KOG0625|consensus
Back Show alignment and domain information
Probab=99.74 E-value=9.8e-18 Score=133.38 Aligned_cols=95 Identities=57% Similarity=0.981 Sum_probs=88.3
Q ss_pred CceeEEEecChHHHHHHHHhhcCchhHHhhhhCCCCCCCcEEEEeCCCCcchHHHHHHHHHhcCCCceeeecCccCCCCC
Q psy5980 5 AQFQVDVIDSVEVYLQLMKEIFDFPKLQSLIKGSSGRPPFKLLINSMHGVTGPYVKKIFLEELGAQPDNAVNTTPLPDFG 84 (103)
Q Consensus 5 ~~g~~~~~D~~~~Yi~~l~~~id~~~i~~~~~~~~~~~~lkVvvD~~nGa~~~~~~~ll~~~lG~~~v~~i~~~~Dg~F~ 84 (103)
+++.++.+|+..+|++.+++.||+++|++++++ +.++|+.+|+|||++++|...+|.++||++.-..+||.|-|+|+
T Consensus 178 gpf~VeviDpv~~Yv~lmk~IFDF~~ik~lls~---~~~~k~~~DamhGvtGpY~~~IfvdelGa~~~~~~n~~Pl~DFG 254 (558)
T KOG0625|consen 178 GPFTVEVIDPVKDYVNLMKEIFDFDLIKSLLSG---PKKLKFRFDAMHGVTGPYVKAIFVDELGAPASSLQNCVPLEDFG 254 (558)
T ss_pred CCeeEEEeccHHHHHHHHHHHhCHHHHHHHhcC---CCCceEEEeecccccchhhhHHHHhhhCCChHHhccCeeccccC
Confidence 678899999999999999999999999998776 34899999999999999999999889999877789999999999
Q ss_pred CCCCCCcHHHHHHHHHhh
Q psy5980 85 GHHPDPNLTYAADLVQAM 102 (103)
Q Consensus 85 g~~PeP~~~nL~~L~~~V 102 (103)
|+||+|+..+.+.|.++|
T Consensus 255 G~HPDPNLTYAk~LV~rv 272 (558)
T KOG0625|consen 255 GGHPDPNLTYAKDLVDRV 272 (558)
T ss_pred CCCCCCchhhHHHHHHHh
Confidence 999999999999998876
>PRK15414 phosphomannomutase CpsG; Provisional
Back Show alignment and domain information
Probab=99.72 E-value=2.2e-17 Score=132.01 Aligned_cols=87 Identities=30% Similarity=0.415 Sum_probs=75.5
Q ss_pred ceeEEEecChHHHHHHHHhhcCchhHHhhhhCCCCCCCcEEEEeCCCCcchHHHHHH---HHHhcCCC-ceeeecCccCC
Q psy5980 6 QFQVDVIDSVEVYLQLMKEIFDFPKLQSLIKGSSGRPPFKLLINSMHGVTGPYVKKI---FLEELGAQ-PDNAVNTTPLP 81 (103)
Q Consensus 6 ~g~~~~~D~~~~Yi~~l~~~id~~~i~~~~~~~~~~~~lkVvvD~~nGa~~~~~~~l---l~~~lG~~-~v~~i~~~~Dg 81 (103)
.|.+...|+.+.|+++|.+.+|.++++ ++|||+||+||+++.+++.+ |+ ++||. .++.+|++|||
T Consensus 143 ~g~~~~~~~~~~Yi~~l~~~id~~~~~----------~lkVvvD~~~G~~~~~~~~l~~~l~-~lG~~v~v~~~~~~pdg 211 (456)
T PRK15414 143 RGRYQQINLRDAYVDHLFGYINVKNLT----------PLKLVINSGNGAAGPVVDAIEARFK-ALGAPVELIKVHNTPDG 211 (456)
T ss_pred CCcEEecCcHHHHHHHHHHhcccccCC----------CCEEEEECCCCcchhhHHHHHHHHH-hcCCCeEEEEeecCCCC
Confidence 466777789999999999999875542 69999999999999999998 78 99982 15689999999
Q ss_pred CCCCCCCCCc-HHHHHHHHHhhC
Q psy5980 82 DFGGHHPDPN-LTYAADLVQAMQ 103 (103)
Q Consensus 82 ~F~g~~PeP~-~~nL~~L~~~V~ 103 (103)
.||+++|||. +++|..|++.|+
T Consensus 212 ~F~~~~p~P~~~~~l~~l~~~v~ 234 (456)
T PRK15414 212 NFPNGIPNPLLPECRDDTRNAVI 234 (456)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHH
Confidence 9999999999 689999998773
>PLN02307 phosphoglucomutase
Back Show alignment and domain information
Probab=99.72 E-value=3.5e-17 Score=134.78 Aligned_cols=88 Identities=55% Similarity=0.961 Sum_probs=74.4
Q ss_pred EEecChHHHHHHHHhhcCchhHHhhhhCCCCCCCcEEEEeCCCCcchHHHHHHH-HHhcCCCceeeecCccCCCCCCCCC
Q psy5980 10 DVIDSVEVYLQLMKEIFDFPKLQSLIKGSSGRPPFKLLINSMHGVTGPYVKKIF-LEELGAQPDNAVNTTPLPDFGGHHP 88 (103)
Q Consensus 10 ~~~D~~~~Yi~~l~~~id~~~i~~~~~~~~~~~~lkVvvD~~nGa~~~~~~~ll-~~~lG~~~v~~i~~~~Dg~F~g~~P 88 (103)
+..|+.+.|+++|.+.+|++.|++.... .+||||+|||||+|+.+++++| + ++|++.++.+|++|||.||+++|
T Consensus 195 ~~~d~~~~Yi~~l~~~i~~~~i~~~~~~----~~lkVvvD~~hGag~~~~~~lL~~-~lG~~~~~~i~~~pDg~Fp~~~P 269 (579)
T PLN02307 195 EVIDPVEDYVKLMKSIFDFELIKKLLSR----PDFTFCFDAMHGVTGAYAKRIFVE-ELGAPESSLLNCVPKEDFGGGHP 269 (579)
T ss_pred EEecCHHHHHHHHHHhhCHHHHhhhccc----CCCeEEEeCCCCccHHHHHHHHHH-hcCCCceeeecCccCCCCCCCCC
Confidence 5579999999999999988766632110 1699999999999999999999 6 99996234999999999999999
Q ss_pred CCcHHHHHHHHHhh
Q psy5980 89 DPNLTYAADLVQAM 102 (103)
Q Consensus 89 eP~~~nL~~L~~~V 102 (103)
||.+++|.+|...+
T Consensus 270 nP~~~~l~~lv~~~ 283 (579)
T PLN02307 270 DPNLTYAKELVKRM 283 (579)
T ss_pred CCCHHHHHHHHHHh
Confidence 99999999988765
>cd03087 PGM_like1 This archaeal PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates
Back Show alignment and domain information
Probab=99.72 E-value=2.9e-17 Score=130.31 Aligned_cols=85 Identities=19% Similarity=0.326 Sum_probs=76.1
Q ss_pred eeEEEec-ChHHHHHHHHhhcCchhHHhhhhCCCCCCCcEEEEeCCCCcchHHHHHHHHHhcCCCceeeecCccCCCCCC
Q psy5980 7 FQVDVID-SVEVYLQLMKEIFDFPKLQSLIKGSSGRPPFKLLINSMHGVTGPYVKKIFLEELGAQPDNAVNTTPLPDFGG 85 (103)
Q Consensus 7 g~~~~~D-~~~~Yi~~l~~~id~~~i~~~~~~~~~~~~lkVvvD~~nGa~~~~~~~ll~~~lG~~~v~~i~~~~Dg~F~g 85 (103)
|.+...| +.+.|+++|.+.++.+. .. ++|||+||+||+++.+++.+|+ +|||+ ++.+|+++||.||+
T Consensus 137 g~~~~~~~~~~~Y~~~l~~~~~~~~--~~--------~lkIvid~~~G~~~~~~~~~l~-~lg~~-v~~~~~~~d~~f~~ 204 (439)
T cd03087 137 GSVRREDSAIDEYIEAILDKVDIDG--GK--------GLKVVVDCGNGAGSLTTPYLLR-ELGCK-VITLNANPDGFFPG 204 (439)
T ss_pred eeEEecCccHHHHHHHHHHhcCccc--CC--------CCEEEEECCCCchHHHHHHHHH-HcCCE-EEEECCcCCCCCCC
Confidence 6777778 99999999999998643 11 7999999999999999999999 99995 88999999999999
Q ss_pred CCCCCcHHHHHHHHHhhC
Q psy5980 86 HHPDPNLTYAADLVQAMQ 103 (103)
Q Consensus 86 ~~PeP~~~nL~~L~~~V~ 103 (103)
++|+|.+++|.+|.+.|+
T Consensus 205 ~~p~p~~~~l~~l~~~v~ 222 (439)
T cd03087 205 RPPEPTPENLSELMELVR 222 (439)
T ss_pred CCCCCCHHHHHHHHHHHH
Confidence 999999999999998874
The alpha-D-phosphohexomutases include several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Members of this superfamily include the phosphoglucomutases (PGM1 and PGM2), phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.
>cd03089 PMM_PGM The phosphomannomutase/phosphoglucomutase (PMM/PGM) bifunctional enzyme catalyzes the reversible conversion of 1-phospho to 6-phospho-sugars (e
Back Show alignment and domain information
Probab=99.72 E-value=2.8e-17 Score=130.60 Aligned_cols=86 Identities=24% Similarity=0.455 Sum_probs=76.6
Q ss_pred CceeEEEecChHHHHHHHHhhcCchhHHhhhhCCCCCCCcEEEEeCCCCcchHHHHHHHHHhcCCCceeeecCccCCCCC
Q psy5980 5 AQFQVDVIDSVEVYLQLMKEIFDFPKLQSLIKGSSGRPPFKLLINSMHGVTGPYVKKIFLEELGAQPDNAVNTTPLPDFG 84 (103)
Q Consensus 5 ~~g~~~~~D~~~~Yi~~l~~~id~~~i~~~~~~~~~~~~lkVvvD~~nGa~~~~~~~ll~~~lG~~~v~~i~~~~Dg~F~ 84 (103)
+.|.+...|..+.|+++|.+.+|.+. . ++|||+||+||+++.+++.+|+ ++||. ++.+|+++||.||
T Consensus 136 ~~g~~~~~d~~~~Y~~~l~~~i~~~~---~--------~lkVvvd~~~G~~~~~~~~ll~-~lG~~-v~~i~~~~d~~F~ 202 (443)
T cd03089 136 GRGSVEKVDILPDYIDRLLSDIKLGK---R--------PLKVVVDAGNGAAGPIAPQLLE-ALGCE-VIPLFCEPDGTFP 202 (443)
T ss_pred CCCcEEECCCHHHHHHHHHHhccccc---C--------CCeEEEECCCCchHHHHHHHHH-HCCCE-EEEecCCCCCCCC
Confidence 34777777999999999999998642 2 7999999999999999999999 99995 9999999999999
Q ss_pred CCCCCCc-HHHHHHHHHhhC
Q psy5980 85 GHHPDPN-LTYAADLVQAMQ 103 (103)
Q Consensus 85 g~~PeP~-~~nL~~L~~~V~ 103 (103)
++.|+|. +++|..+++.|+
T Consensus 203 ~~~p~p~~~~~l~~l~~~v~ 222 (443)
T cd03089 203 NHHPDPTDPENLEDLIAAVK 222 (443)
T ss_pred CCCcCCCCHHHHHHHHHHHH
Confidence 9999996 799999998874
g. between mannose-1-phosphate and mannose-6-phosphate or glucose-1-phosphate and glucose-6-phosphate) via a bisphosphorylated sugar intermediate. The reaction involves two phosphoryl transfers, with an intervening 180 degree reorientation of the reaction intermediate during catalysis. Reorientation of the intermediate occurs without dissociation from the active site of the enzyme and is thus, a simple example of processivity, as defined by multiple rounds of catalysis without release of substrate. Glucose-6-phosphate and glucose-1-phosphate are known to be utilized for energy metabolism and cell surface construction, respectively. PMM/PGM belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other membe
>PLN02371 phosphoglucosamine mutase family protein
Back Show alignment and domain information
Probab=99.70 E-value=5.7e-17 Score=133.39 Aligned_cols=92 Identities=21% Similarity=0.277 Sum_probs=76.6
Q ss_pred CceeEEEecChHHHHHHHHhhcCchhH----HhhhhCCCCCCCcEEEEeCCCCcchHHHHHHHHHhcCCCcee-eecCcc
Q psy5980 5 AQFQVDVIDSVEVYLQLMKEIFDFPKL----QSLIKGSSGRPPFKLLINSMHGVTGPYVKKIFLEELGAQPDN-AVNTTP 79 (103)
Q Consensus 5 ~~g~~~~~D~~~~Yi~~l~~~id~~~i----~~~~~~~~~~~~lkVvvD~~nGa~~~~~~~ll~~~lG~~~v~-~i~~~~ 79 (103)
+.|.+...|..+.|+++|++.++...+ .....+ ++|||+|||||+|+.+++.+|+ +|||+ ++ .+|++|
T Consensus 226 ~~g~i~~~d~~~~Y~~~l~~~i~~~~~~~~~~~~~~~-----~lkIvvD~~nGag~~~~~~lL~-~LG~~-v~~~~~~~p 298 (583)
T PLN02371 226 ASSVVCRVDFMSTYAKHLRDAIKEGVGHPTNYETPLE-----GFKIVVDAGNGAGGFFAEKVLE-PLGAD-TSGSLFLEP 298 (583)
T ss_pred cCCcEEEechHHHHHHHHHHHHHHhhccccccccCCC-----CCEEEEeCCCCchHHHHHHHHH-HcCCC-eEeeccCCC
Confidence 346677789999999999999875433 110001 7999999999999999999999 99996 76 899999
Q ss_pred CCCCCCCCCCCc-HHHHHHHHHhhC
Q psy5980 80 LPDFGGHHPDPN-LTYAADLVQAMQ 103 (103)
Q Consensus 80 Dg~F~g~~PeP~-~~nL~~L~~~V~ 103 (103)
||.||+|+|+|. +++|+.++++|+
T Consensus 299 Dg~Fp~~~P~P~~~~~l~~l~~~v~ 323 (583)
T PLN02371 299 DGMFPNHIPNPEDKAAMSATTQAVL 323 (583)
T ss_pred CCCCCCcCCCCCCHHHHHHHHHHHH
Confidence 999999999999 589999998874
>cd05803 PGM_like4 This PGM-like (phosphoglucomutase-like) domain is located C-terminal to a mannose-1-phosphate guanyltransferase domain in a protein of unknown function that is found in both prokaryotes and eukaryotes
Back Show alignment and domain information
Probab=99.70 E-value=6e-17 Score=128.91 Aligned_cols=86 Identities=21% Similarity=0.366 Sum_probs=75.3
Q ss_pred eeEEE-ecChHHHHHHHHhhcCchhHH--hhhhCCCCCCCcEEEEeCCCCcchHHHHHHHHHhcCCCceeeecCccCCCC
Q psy5980 7 FQVDV-IDSVEVYLQLMKEIFDFPKLQ--SLIKGSSGRPPFKLLINSMHGVTGPYVKKIFLEELGAQPDNAVNTTPLPDF 83 (103)
Q Consensus 7 g~~~~-~D~~~~Yi~~l~~~id~~~i~--~~~~~~~~~~~lkVvvD~~nGa~~~~~~~ll~~~lG~~~v~~i~~~~Dg~F 83 (103)
|.++. .|..+.|+++|.+.++.+.++ .. ++|||+||+||+++.+++.+|+ ++||+ ++.+|+++||.|
T Consensus 142 g~~~~~~~~~~~Y~~~l~~~~~~~~~~~~~~--------~lkVvvd~~~G~~~~~~~~ll~-~lg~~-v~~~~~~~d~~F 211 (445)
T cd05803 142 GEVTFSEDAIAEHIDKVLALVDVDVIKIRER--------NFKVAVDSVNGAGGLLIPRLLE-KLGCE-VIVLNCEPTGLF 211 (445)
T ss_pred cceeccCchHHHHHHHHHhhcccchhhhccC--------CCEEEEECCCCcHHHHHHHHHH-HcCCE-EEEeCCcCCCCC
Confidence 55554 378899999999999876554 33 7999999999999999999999 99996 889999999999
Q ss_pred CCCCCCCcHHHHHHHHHhhC
Q psy5980 84 GGHHPDPNLTYAADLVQAMQ 103 (103)
Q Consensus 84 ~g~~PeP~~~nL~~L~~~V~ 103 (103)
| ++|+|.+++|..|.+.|+
T Consensus 212 ~-~~p~p~~~~l~~l~~~v~ 230 (445)
T cd05803 212 P-HTPEPLPENLTQLCAAVK 230 (445)
T ss_pred C-CCCCCChHHHHHHHHHHH
Confidence 8 899999999999998774
This domain belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Members of this superfamily include the phosphoglucomutases (PGM1 and PGM2), phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.
>PRK14321 glmM phosphoglucosamine mutase; Provisional
Back Show alignment and domain information
Probab=99.67 E-value=2e-16 Score=126.27 Aligned_cols=82 Identities=18% Similarity=0.252 Sum_probs=74.3
Q ss_pred eeEEEecChHHHHHHHHhhcCchhHHhhhhCCCCCCCcEEEEeCCCCcchHHHHHHHHHhcCCCceeeecCccCCCCCCC
Q psy5980 7 FQVDVIDSVEVYLQLMKEIFDFPKLQSLIKGSSGRPPFKLLINSMHGVTGPYVKKIFLEELGAQPDNAVNTTPLPDFGGH 86 (103)
Q Consensus 7 g~~~~~D~~~~Yi~~l~~~id~~~i~~~~~~~~~~~~lkVvvD~~nGa~~~~~~~ll~~~lG~~~v~~i~~~~Dg~F~g~ 86 (103)
|.++..|+.+.|+++|.+.+|.. . ++|||+|||||+++.+++.+|+ +|||+ ++.+|+++||.|| +
T Consensus 141 g~~~~~~~~~~Y~~~l~~~~~~~----~--------~~kVvvD~~~G~~~~~~~~il~-~lg~~-v~~i~~~~d~~f~-~ 205 (449)
T PRK14321 141 GTLRRADPKEEYIKAALEMIKLE----N--------SYTVVVDSGNGAGSILSPYLQR-ELGNK-VISLNSHPSGFFV-R 205 (449)
T ss_pred ceeeecccHHHHHHHHHHhcCcC----C--------CCEEEEECCCchHHHHHHHHHH-HcCCE-EEEeCccCCCCCC-C
Confidence 66777799999999999999852 2 7999999999999999999999 99995 9999999999998 6
Q ss_pred CCCCcHHHHHHHHHhhC
Q psy5980 87 HPDPNLTYAADLVQAMQ 103 (103)
Q Consensus 87 ~PeP~~~nL~~L~~~V~ 103 (103)
+|+|.+++|.+|.+.|+
T Consensus 206 ~p~p~~~~l~~l~~~v~ 222 (449)
T PRK14321 206 ELEPNAKSLSMLAKTVK 222 (449)
T ss_pred CCCCchhhHHHHHHHHH
Confidence 89999999999999874
>COG1109 {ManB} Phosphomannomutase [Carbohydrate transport and metabolism]
Back Show alignment and domain information
Probab=99.67 E-value=1.6e-16 Score=127.35 Aligned_cols=88 Identities=24% Similarity=0.420 Sum_probs=76.9
Q ss_pred CceeEEEec-ChHHHHHHHHhhcCchhHHhhhhCCCCCCCcEEEEeCCCCcchHHHHHHHHHhcCCCceeeecCccCCCC
Q psy5980 5 AQFQVDVID-SVEVYLQLMKEIFDFPKLQSLIKGSSGRPPFKLLINSMHGVTGPYVKKIFLEELGAQPDNAVNTTPLPDF 83 (103)
Q Consensus 5 ~~g~~~~~D-~~~~Yi~~l~~~id~~~i~~~~~~~~~~~~lkVvvD~~nGa~~~~~~~ll~~~lG~~~v~~i~~~~Dg~F 83 (103)
..|.++..+ ..+.|++++.+.++.+ +... ++|||+||+||+|+.+++++|+ ++|+. ++.++++|||.|
T Consensus 148 ~~g~~~~~~~~~~~Y~~~i~~~~~~~-~~~~--------~lkVv~d~~nGaa~~~~~~ll~-~lG~~-vv~~~~~pDg~f 216 (464)
T COG1109 148 ELGRLKRIPDALDRYIEFIKSLVDVD-LKLR--------GLKVVVDCANGAAGLVAPRLLK-ELGAE-VVSINCDPDGLF 216 (464)
T ss_pred cCCceeEcchhHHHHHHHHHHhcccc-cccC--------CcEEEEECCCCchhHHHHHHHH-HcCCE-EEEecCCCCCCC
Confidence 357778777 8999999999999865 2221 6999999999999999999999 99985 999999999999
Q ss_pred CCCCCCCcHHHHHHHHHhhC
Q psy5980 84 GGHHPDPNLTYAADLVQAMQ 103 (103)
Q Consensus 84 ~g~~PeP~~~nL~~L~~~V~ 103 (103)
|+++|+|.++++.+|.++|+
T Consensus 217 p~~~p~p~~~~~~~l~~~v~ 236 (464)
T COG1109 217 PNINPNPGETELLDLAKAVK 236 (464)
T ss_pred CCCCCCCCCccHHHHHHHHH
Confidence 99999999988888888764
>cd05801 PGM_like3 This bacterial PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the alpha-D-phosphohexomutase superfamily
Back Show alignment and domain information
Probab=99.66 E-value=3.7e-16 Score=126.92 Aligned_cols=86 Identities=20% Similarity=0.204 Sum_probs=74.3
Q ss_pred eeEEEecChHHHHHHHHhhcCchhHHhhhhCCCCCCCcEEEEeCCCCcchHHHHHHHHHhcCCCceeeecCccCCCCCCC
Q psy5980 7 FQVDVIDSVEVYLQLMKEIFDFPKLQSLIKGSSGRPPFKLLINSMHGVTGPYVKKIFLEELGAQPDNAVNTTPLPDFGGH 86 (103)
Q Consensus 7 g~~~~~D~~~~Yi~~l~~~id~~~i~~~~~~~~~~~~lkVvvD~~nGa~~~~~~~ll~~~lG~~~v~~i~~~~Dg~F~g~ 86 (103)
+.+...|+.+.|+++|.+.+|.+.++.. ++|||+||+||+|+.+++++|+ ++||+ ++.+|+++||.||++
T Consensus 182 ~~~~~~~~~~~Y~~~l~~~v~~~~~~~~--------~lkVvvd~~~G~~~~~~~~ll~-~lG~~-v~~l~~~~d~~f~~~ 251 (522)
T cd05801 182 GYTHRHDFVTPYVADLGNVIDMDAIRKS--------GLRLGVDPLGGASVPYWQPIAE-KYGLN-LTVVNPKVDPTFRFM 251 (522)
T ss_pred CceecCCcHHHHHHHHHHhhChhhhhcC--------CceEEEeCCCCccHHHHHHHHH-HcCCC-EEEEcCeeCCCCCCC
Confidence 5555568999999999999998777644 7999999999999999999999 99995 989999999999988
Q ss_pred CCC--------C-cHHHHHHHHHhh
Q psy5980 87 HPD--------P-NLTYAADLVQAM 102 (103)
Q Consensus 87 ~Pe--------P-~~~nL~~L~~~V 102 (103)
+|+ | .+++|++|++.+
T Consensus 252 ~p~~~~~~~~~p~~~~~l~~l~~~~ 276 (522)
T cd05801 252 TLDHDGKIRMDCSSPYAMAGLLKLK 276 (522)
T ss_pred CCCcccCCCCCCCCHHHHHHHHHhh
Confidence 875 3 368999988753
The alpha-D-phosphohexomutases include several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.
>TIGR01132 pgm phosphoglucomutase, alpha-D-glucose phosphate-specific
Back Show alignment and domain information
Probab=99.66 E-value=3.8e-16 Score=127.43 Aligned_cols=85 Identities=22% Similarity=0.226 Sum_probs=73.2
Q ss_pred ceeEEEecChHHHHHHHHhhcCchhHHhhhhCCCCCCCcEEEEeCCCCcchHHHHHHHHHhcCCCceeeecCccCCCCCC
Q psy5980 6 QFQVDVIDSVEVYLQLMKEIFDFPKLQSLIKGSSGRPPFKLLINSMHGVTGPYVKKIFLEELGAQPDNAVNTTPLPDFGG 85 (103)
Q Consensus 6 ~g~~~~~D~~~~Yi~~l~~~id~~~i~~~~~~~~~~~~lkVvvD~~nGa~~~~~~~ll~~~lG~~~v~~i~~~~Dg~F~g 85 (103)
.|.+...|+.+.|+++|.+.++.++|+.. ++|||+|||||+++.+++.+|+ ++||+ ++.+|+++||.||+
T Consensus 198 ~g~~~~~d~~~~Y~~~l~~~i~~~~i~~~--------~lkVvvD~~~Ga~~~~~~~il~-~lG~~-v~~l~~~~d~~f~~ 267 (543)
T TIGR01132 198 SGTVKAHDLVQPYVDGLADIVDMAAIQKA--------GLRLGVDPLGGSGIDYWKRIAE-KYNLN-LTLVNPQVDPTFRF 267 (543)
T ss_pred cCceecCCcHHHHHHHHHHhhhhhhhhcC--------CceEEEeCCCCCcHHHHHHHHH-HcCCC-EEEEcCeeCCCCCC
Confidence 35566678999999999999998777644 7999999999999999999999 99995 99999999999999
Q ss_pred CCCC---------CcHHHHHHHHH
Q psy5980 86 HHPD---------PNLTYAADLVQ 100 (103)
Q Consensus 86 ~~Pe---------P~~~nL~~L~~ 100 (103)
++|+ |.+++|++|++
T Consensus 268 ~~pd~~~~~~~~~~~~e~l~~l~~ 291 (543)
T TIGR01132 268 MTLDKDGKIRMDCSSPYAMAGLLA 291 (543)
T ss_pred CCCCcccccCCCCCCHHHHHHHhh
Confidence 8875 23588888775
This enzyme interconverts alpha-D-glucose-1-P and alpha-D-glucose-6-P.
>cd05799 PGM2 This CD includes PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2-like 1)
Back Show alignment and domain information
Probab=99.62 E-value=1.1e-15 Score=122.75 Aligned_cols=88 Identities=23% Similarity=0.392 Sum_probs=74.0
Q ss_pred eeEEEe--cChHHHHHHHHhhcCchhH-HhhhhCCCCCCCcEEEEeCCCCcchHHHHHHHHHhcCCC-c-eeeecCccCC
Q psy5980 7 FQVDVI--DSVEVYLQLMKEIFDFPKL-QSLIKGSSGRPPFKLLINSMHGVTGPYVKKIFLEELGAQ-P-DNAVNTTPLP 81 (103)
Q Consensus 7 g~~~~~--D~~~~Yi~~l~~~id~~~i-~~~~~~~~~~~~lkVvvD~~nGa~~~~~~~ll~~~lG~~-~-v~~i~~~~Dg 81 (103)
|.++.+ |..+.|+++|++.++.+.+ +.. ++|||+|||||+++.+++.+|+ +|||+ . +..+++++||
T Consensus 155 g~~~~~~~~~~~~Y~~~l~~~i~~~~~~~~~--------~~kVvvD~~~G~~~~~~~~il~-~LG~~~v~~~~~~~~~d~ 225 (487)
T cd05799 155 GLIKYIGEEIDDAYLEAVKKLLVNPELNEGK--------DLKIVYTPLHGVGGKFVPRALK-EAGFTNVIVVEEQAEPDP 225 (487)
T ss_pred CceEEcchHHHHHHHHHHHhhhcccccccCC--------CCcEEEeCCCCccHHHHHHHHH-HcCCCCcEEeeeccCCCc
Confidence 666553 6789999999999986544 433 7999999999999999999999 99984 2 5678999999
Q ss_pred CCCC-CCCCCc-HHHHHHHHHhhC
Q psy5980 82 DFGG-HHPDPN-LTYAADLVQAMQ 103 (103)
Q Consensus 82 ~F~g-~~PeP~-~~nL~~L~~~V~ 103 (103)
.||+ ++|+|. +++|+++++.|+
T Consensus 226 ~F~~~~~p~p~~~~~l~~l~~~v~ 249 (487)
T cd05799 226 DFPTVKFPNPEEPGALDLAIELAK 249 (487)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHH
Confidence 9998 579998 599999998773
The mammalian PGM2 is thought to be a phosphopentomutase that catalyzes the conversion of the nucleoside breakdown products, ribose-1-phosphate and deoxyribose-1-phosphate to the corresponding 5-phosphopentoses. PGM2L1 is thought to catalyze the 1,3-bisphosphoglycerate-dependent synthesis of glucose 1,6-bisphosphate and other aldose-bisphosphates that serve as cofactors for several sugar phosphomutases and possibly also as regulators of glycolytic enzymes. PGM2 and PGM2L1 belong to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/ph
>PRK07564 phosphoglucomutase; Validated
Back Show alignment and domain information
Probab=99.62 E-value=2.5e-15 Score=122.61 Aligned_cols=84 Identities=31% Similarity=0.485 Sum_probs=73.4
Q ss_pred eeEEEecChHHHHHHHHhhcCchhHHhhhhCCCCCCCcEEEEeCCCCcchHHHHHHHHHhcCCCceeeecCccCCCC---
Q psy5980 7 FQVDVIDSVEVYLQLMKEIFDFPKLQSLIKGSSGRPPFKLLINSMHGVTGPYVKKIFLEELGAQPDNAVNTTPLPDF--- 83 (103)
Q Consensus 7 g~~~~~D~~~~Yi~~l~~~id~~~i~~~~~~~~~~~~lkVvvD~~nGa~~~~~~~ll~~~lG~~~v~~i~~~~Dg~F--- 83 (103)
|.+...|+.+.|+++|.+.+|.+.++.. ++|||+|||||+++.+++++|+ ++||+ ++.+|+++||.|
T Consensus 198 g~~~~~d~~~~Y~~~l~~~i~~~~i~~~--------~lkIvvD~~~G~~~~~~~~ll~-~lG~~-v~~l~~~~d~~f~~~ 267 (543)
T PRK07564 198 MTVEVIDPVADYVEDLENVFDFDAIRKA--------GLRLGVDPLGGATGPYWKAIAE-RYGLD-LTVVNAPVDPTFNFM 267 (543)
T ss_pred CcEEecccHHHHHHHHHHhhChhhhhcC--------CceEEEecCCCCcHHHHHHHHH-HcCCc-EEEeCCcCCCCCCCC
Confidence 5566678999999999999998777644 7999999999999999999999 99995 999999999988
Q ss_pred -----CCCCCCCc-HHHHHHHHH
Q psy5980 84 -----GGHHPDPN-LTYAADLVQ 100 (103)
Q Consensus 84 -----~g~~PeP~-~~nL~~L~~ 100 (103)
|+|+|+|. +++|..+.+
T Consensus 268 ~~~~~~~~~p~P~~~~~L~~l~~ 290 (543)
T PRK07564 268 PLDDDGKIRMDCSSPYAMAGLLA 290 (543)
T ss_pred CCCccCCcCCCCChHHHHHHHHh
Confidence 47889998 578877764
>PRK14315 glmM phosphoglucosamine mutase; Provisional
Back Show alignment and domain information
Probab=99.61 E-value=1.9e-15 Score=120.56 Aligned_cols=84 Identities=15% Similarity=0.161 Sum_probs=70.2
Q ss_pred ceeEEEe-cChHHHHHHHHhhcCchhHHhhhhCCCCCCCcEEEEeCCCCcchHHHHHHHHHhcCCCceeeecCccCCCCC
Q psy5980 6 QFQVDVI-DSVEVYLQLMKEIFDFPKLQSLIKGSSGRPPFKLLINSMHGVTGPYVKKIFLEELGAQPDNAVNTTPLPDFG 84 (103)
Q Consensus 6 ~g~~~~~-D~~~~Yi~~l~~~id~~~i~~~~~~~~~~~~lkVvvD~~nGa~~~~~~~ll~~~lG~~~v~~i~~~~Dg~F~ 84 (103)
.|.++.+ |+.+.|+++|++.+|.+ ++.. ++|||+|||||+++.+++.+|+ +|||+ ++.+|+++||.||
T Consensus 147 ~g~~~~~~~~~~~Y~~~l~~~id~~-i~~~--------~lkVvvD~~~G~~~~~~~~ll~-~lG~~-v~~i~~~~dg~~~ 215 (448)
T PRK14315 147 IGRAKRIDDAHGRYIEFAKRTLPRD-LRLD--------GLRVVVDCANGAAYKVAPEALW-ELGAE-VITIGVEPNGFNI 215 (448)
T ss_pred CcceEEecchHHHHHHHHHHhcccc-cccC--------CCEEEEECCCchHHHHHHHHHH-HcCCe-EEEeccCCCCCCC
Confidence 3667666 68899999999999854 5543 7999999999999999999999 99996 8899999999998
Q ss_pred CCCCCCcHHHHHHHHHhh
Q psy5980 85 GHHPDPNLTYAADLVQAM 102 (103)
Q Consensus 85 g~~PeP~~~nL~~L~~~V 102 (103)
.++|.| +|+.+|++.|
T Consensus 216 ~~~~~~--~~l~~l~~~v 231 (448)
T PRK14315 216 NEECGS--THPEALAKKV 231 (448)
T ss_pred CCCCCC--CCHHHHHHHH
Confidence 665554 5777777766
>PRK14317 glmM phosphoglucosamine mutase; Provisional
Back Show alignment and domain information
Probab=99.61 E-value=2.2e-15 Score=120.66 Aligned_cols=84 Identities=15% Similarity=0.094 Sum_probs=71.2
Q ss_pred eeEEE-ecChHHHHHHHHhhcCchhHHhhhhCCCCCCCcEEEEeCCCCcchHHHHHHHHHhcCCCceeeecCccCCCCCC
Q psy5980 7 FQVDV-IDSVEVYLQLMKEIFDFPKLQSLIKGSSGRPPFKLLINSMHGVTGPYVKKIFLEELGAQPDNAVNTTPLPDFGG 85 (103)
Q Consensus 7 g~~~~-~D~~~~Yi~~l~~~id~~~i~~~~~~~~~~~~lkVvvD~~nGa~~~~~~~ll~~~lG~~~v~~i~~~~Dg~F~g 85 (103)
|.+.. .|..+.|+++|.+.+|.+ |+.. ++|||+||+||+++.+++.+|+ +|||+ ++.+|++|||.|+
T Consensus 160 g~~~~~~~~~~~Y~~~l~~~id~~-i~~~--------~~kVvvD~~nG~~~~~~~~ll~-~LG~~-v~~l~~~~dg~~~- 227 (465)
T PRK14317 160 GRHYHRPELLDDYRDALLESLPDR-VNLQ--------GVKIVLDLAWGAAVACAPEVFK-ALGAE-VICLHDQPDGDRI- 227 (465)
T ss_pred CceEecCChHHHHHHHHHHhcCcc-cccC--------CCEEEEECCCchHHHHHHHHHH-HcCCe-EEEEecccCCCCC-
Confidence 54543 488999999999999864 5433 7999999999999999999999 99995 9999999999997
Q ss_pred CCCCCcHHHHHHHHHhhC
Q psy5980 86 HHPDPNLTYAADLVQAMQ 103 (103)
Q Consensus 86 ~~PeP~~~nL~~L~~~V~ 103 (103)
+|+|.+++|++|+++|+
T Consensus 228 -~~~~~~~~l~~l~~~v~ 244 (465)
T PRK14317 228 -NVNCGSTHLEPLQAAVL 244 (465)
T ss_pred -CCCCchHhHHHHHHHHH
Confidence 45566789999998874
>PRK10887 glmM phosphoglucosamine mutase; Provisional
Back Show alignment and domain information
Probab=99.60 E-value=2.8e-15 Score=119.35 Aligned_cols=86 Identities=22% Similarity=0.230 Sum_probs=70.7
Q ss_pred CceeEEEe-cChHHHHHHHHhhcCchhHHhhhhCCCCCCCcEEEEeCCCCcchHHHHHHHHHhcCCCceeeecCccCCCC
Q psy5980 5 AQFQVDVI-DSVEVYLQLMKEIFDFPKLQSLIKGSSGRPPFKLLINSMHGVTGPYVKKIFLEELGAQPDNAVNTTPLPDF 83 (103)
Q Consensus 5 ~~g~~~~~-D~~~~Yi~~l~~~id~~~i~~~~~~~~~~~~lkVvvD~~nGa~~~~~~~ll~~~lG~~~v~~i~~~~Dg~F 83 (103)
+.|.++.. |..+.|+++|++.+|. .++.. ++|||+||+||+++.+++.+|+ +|||+ ++.+|+++||.|
T Consensus 141 ~~g~~~~~~~~~~~Y~~~l~~~id~-~i~~~--------~~kVvvD~~~G~~~~~~~~ll~-~lG~~-v~~~n~~~dg~~ 209 (443)
T PRK10887 141 ELGKASRINDAAGRYIEFCKSTFPN-ELSLR--------GLKIVVDCANGATYHIAPNVFR-ELGAE-VIAIGCEPNGLN 209 (443)
T ss_pred cCceEEEcCChHHHHHHHHHHhcCc-ccccC--------CCEEEEECCCchHHHHHHHHHH-HhCCe-EEEEeccCCCCC
Confidence 34667665 6889999999999984 34332 7999999999999999999999 99995 889999999999
Q ss_pred CCCCCCCcHHHHHHHHHhhC
Q psy5980 84 GGHHPDPNLTYAADLVQAMQ 103 (103)
Q Consensus 84 ~g~~PeP~~~nL~~L~~~V~ 103 (103)
++++|.| +||++|++.|+
T Consensus 210 ~~~~~~~--~~l~~l~~~v~ 227 (443)
T PRK10887 210 INDECGA--TDPEALQAAVL 227 (443)
T ss_pred CCCCCCC--CCHHHHHHHHH
Confidence 8555544 68888888763
>cd05805 MPG1_transferase GTP-mannose-1-phosphate guanyltransferase (MPG1 transferase), also known as GDP-mannose pyrophosphorylase, is a bifunctional enzyme with both phosphomannose isomerase (PMI) activity and GDP-mannose phosphorylase (GMP) activity
Back Show alignment and domain information
Probab=99.60 E-value=2.8e-15 Score=119.13 Aligned_cols=86 Identities=19% Similarity=0.185 Sum_probs=73.0
Q ss_pred eeEEEe-cChHHHHHHHHhhcCchhHHhhhhCCCCCCCcEEEEeCCCCcchHHHHHHHHHhcCCCceeeecCccCCCCCC
Q psy5980 7 FQVDVI-DSVEVYLQLMKEIFDFPKLQSLIKGSSGRPPFKLLINSMHGVTGPYVKKIFLEELGAQPDNAVNTTPLPDFGG 85 (103)
Q Consensus 7 g~~~~~-D~~~~Yi~~l~~~id~~~i~~~~~~~~~~~~lkVvvD~~nGa~~~~~~~ll~~~lG~~~v~~i~~~~Dg~F~g 85 (103)
|.++.. |..+.|+++|.+.++.+.|+.. ++|||+||+||+++.+++++|+ ++||+ ++.+|+++||.|.
T Consensus 139 g~~~~~~~~~~~Y~~~l~~~i~~~~i~~~--------~lkIvvd~~~G~~~~~~~~ll~-~lG~~-v~~i~~~~d~~~~- 207 (441)
T cd05805 139 GDITEPPDFVEYYIRGLLRALDTSGLKKS--------GLKVVIDYAYGVAGIVLPGLLS-RLGCD-VVILNARLDEDAP- 207 (441)
T ss_pred CccccchhHHHHHHHHHHHHhCHHHHhhc--------CCeEEEECCCchHHHHHHHHHH-HcCCE-EEEEecccCCccC-
Confidence 555544 6889999999999998777644 7999999999999999999999 99995 8899999999963
Q ss_pred CCCCCcHHHHHHHHHhhC
Q psy5980 86 HHPDPNLTYAADLVQAMQ 103 (103)
Q Consensus 86 ~~PeP~~~nL~~L~~~V~ 103 (103)
++|+|.+++|..+++.|+
T Consensus 208 ~~~~~~~~~l~~l~~~v~ 225 (441)
T cd05805 208 RTDTERQRSLDRLGRIVK 225 (441)
T ss_pred CCCccchhHHHHHHHHHH
Confidence 556666799999998874
The protein contains an N-terminal NTP transferase domain, an L-beta-H domain, and a C-terminal PGM-like domain that belongs to the alpha-D-phosphohexomutase superfamily. This subfamily is limited to bacteria and archaea. The alpha-D-phosphohexomutases include several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Members of this group appear to lack conserved residues necessary for metal binding and catalytic activity. Other members of this superfamily include the phosphoglucomutases (PGM1 and PGM2), phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional
>cd05802 GlmM GlmM is a bacterial phosphoglucosamine mutase (PNGM) that belongs to the alpha-D-phosphohexomutase superfamily
Back Show alignment and domain information
Probab=99.60 E-value=3.5e-15 Score=118.37 Aligned_cols=84 Identities=21% Similarity=0.204 Sum_probs=69.8
Q ss_pred ceeEEEe-cChHHHHHHHHhhcCchhHHhhhhCCCCCCCcEEEEeCCCCcchHHHHHHHHHhcCCCceeeecCccCCCCC
Q psy5980 6 QFQVDVI-DSVEVYLQLMKEIFDFPKLQSLIKGSSGRPPFKLLINSMHGVTGPYVKKIFLEELGAQPDNAVNTTPLPDFG 84 (103)
Q Consensus 6 ~g~~~~~-D~~~~Yi~~l~~~id~~~i~~~~~~~~~~~~lkVvvD~~nGa~~~~~~~ll~~~lG~~~v~~i~~~~Dg~F~ 84 (103)
.|.++.. |..+.|+++|.+.+|.++ .. ++|||+|||||+++.+++++|+ +|||+ ++.+|+++||.||
T Consensus 141 ~g~~~~~~~~~~~Y~~~l~~~~~~~~--~~--------~lkVvvD~~nG~~~~~~~~ll~-~lg~~-v~~in~~~dg~~~ 208 (434)
T cd05802 141 IGRVYRIDDARGRYIEFLKSTFPKDL--LS--------GLKIVLDCANGAAYKVAPEVFR-ELGAE-VIVINNAPDGLNI 208 (434)
T ss_pred CeeEEEccchHHHHHHHHHHhcCccc--cC--------CCEEEEECCCchHHHHHHHHHH-HcCCe-EEEecCCCCCCCC
Confidence 3666655 788999999999998643 12 7999999999999999999999 99995 9999999999998
Q ss_pred CCCCCCcHHHHHHHHHhhC
Q psy5980 85 GHHPDPNLTYAADLVQAMQ 103 (103)
Q Consensus 85 g~~PeP~~~nL~~L~~~V~ 103 (103)
+++|. ++|+++|.+.|+
T Consensus 209 ~~~~~--~~~~~~l~~~v~ 225 (434)
T cd05802 209 NVNCG--STHPESLQKAVL 225 (434)
T ss_pred CCCCC--ccCHHHHHHHHH
Confidence 66544 468888887763
It is required for the interconversion of glucosamine-6-phosphate and glucosamine-1-phosphate in the biosynthetic pathway of UDP-N-acetylglucosamine, an essential precursor to components of the cell envelope. In order to be active, GlmM must be phosphorylated, which can occur via autophosphorylation or by the Ser/Thr kinase StkP. GlmM functions in a classical ping-pong bi-bi mechanism with glucosamine-1,6-diphosphate as an intermediate. Other members of the alpha-D-phosphohexomutase superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.
>PRK14324 glmM phosphoglucosamine mutase; Provisional
Back Show alignment and domain information
Probab=99.59 E-value=3e-15 Score=119.53 Aligned_cols=83 Identities=19% Similarity=0.226 Sum_probs=67.2
Q ss_pred eeEEEe-cChHHHHHHHHhhcCchhHHhhhhCCCCCCCcEEEEeCCCCcchHHHHHHHHHhcCCCceeeecCccCCCCCC
Q psy5980 7 FQVDVI-DSVEVYLQLMKEIFDFPKLQSLIKGSSGRPPFKLLINSMHGVTGPYVKKIFLEELGAQPDNAVNTTPLPDFGG 85 (103)
Q Consensus 7 g~~~~~-D~~~~Yi~~l~~~id~~~i~~~~~~~~~~~~lkVvvD~~nGa~~~~~~~ll~~~lG~~~v~~i~~~~Dg~F~g 85 (103)
|.++.. |..+.|+++|.+.++.+ ++.. ++|||+|||||+++.+++.+|+ ++||+ ++.+|+++||.||+
T Consensus 147 g~~~~~~~~~~~Y~~~l~~~i~~~-~~~~--------~lkVvvD~~nGa~~~~~~~ll~-~lG~~-v~~i~~~~dg~~~~ 215 (446)
T PRK14324 147 GSAKRIDDVIGRYIVHIKNSFPKD-LTLK--------GLRIVLDTANGAAYKVAPTVFS-ELGAD-VIVINDEPNGFNIN 215 (446)
T ss_pred eeeEecccHHHHHHHHHHHhcCCc-cCCC--------CCEEEEECCCchHHHHHHHHHH-HcCCe-EEEECCCCCCCCCC
Confidence 666656 68899999999999743 3222 7999999999999999999999 99995 99999999999997
Q ss_pred CCCCCcHHHHHHHHHhh
Q psy5980 86 HHPDPNLTYAADLVQAM 102 (103)
Q Consensus 86 ~~PeP~~~nL~~L~~~V 102 (103)
+.|+| +|+.+|++.|
T Consensus 216 ~~~~~--~~~e~l~~~v 230 (446)
T PRK14324 216 ENCGA--LHPENLAQEV 230 (446)
T ss_pred CCCCC--CCHHHHHHHH
Confidence 77766 3444555554
>PRK14314 glmM phosphoglucosamine mutase; Provisional
Back Show alignment and domain information
Probab=99.57 E-value=6.8e-15 Score=117.40 Aligned_cols=83 Identities=18% Similarity=0.197 Sum_probs=68.1
Q ss_pred eeEEEe-cChHHHHHHHHhhcCchhHHhhhhCCCCCCCcEEEEeCCCCcchHHHHHHHHHhcCCCceeeecCccCCCCCC
Q psy5980 7 FQVDVI-DSVEVYLQLMKEIFDFPKLQSLIKGSSGRPPFKLLINSMHGVTGPYVKKIFLEELGAQPDNAVNTTPLPDFGG 85 (103)
Q Consensus 7 g~~~~~-D~~~~Yi~~l~~~id~~~i~~~~~~~~~~~~lkVvvD~~nGa~~~~~~~ll~~~lG~~~v~~i~~~~Dg~F~g 85 (103)
|.+... |..+.|+++|.+.+| ..++.. ++|||+|||||+++.+++.+|+ +|||+ ++.+|+++||.||+
T Consensus 149 g~~~~~~~~~~~Y~~~l~~~id-~~i~~~--------~~kVvvD~~~Ga~~~~~~~il~-~lg~~-v~~~~~~~dg~~~~ 217 (450)
T PRK14314 149 GKAKRIDDAPGRYIVFLKATFP-KGLTLK--------GLKIVLDCANGAAYKVAPAVFE-ELGAE-VICIGVEPNGLNIN 217 (450)
T ss_pred ceEEEeCchHHHHHHHHHHhhc-cccCCC--------CCEEEEECCCchHHHHHHHHHH-HcCCe-EEEeccCCCCCCCC
Confidence 665544 788999999999998 334322 7999999999999999999999 99996 88999999999997
Q ss_pred CCCCCcHHHHHHHHHhh
Q psy5980 86 HHPDPNLTYAADLVQAM 102 (103)
Q Consensus 86 ~~PeP~~~nL~~L~~~V 102 (103)
++|.| +++.+|.++|
T Consensus 218 ~~~~~--~~~~~l~~~v 232 (450)
T PRK14314 218 AGCGS--LHPEVIAKAV 232 (450)
T ss_pred CCCCC--CCHHHHHHHH
Confidence 76665 5666676665
>TIGR01455 glmM phosphoglucosamine mutase
Back Show alignment and domain information
Probab=99.56 E-value=9.5e-15 Score=116.27 Aligned_cols=86 Identities=21% Similarity=0.207 Sum_probs=70.2
Q ss_pred CceeEEEe-cChHHHHHHHHhhcCchhHHhhhhCCCCCCCcEEEEeCCCCcchHHHHHHHHHhcCCCceeeecCccCCCC
Q psy5980 5 AQFQVDVI-DSVEVYLQLMKEIFDFPKLQSLIKGSSGRPPFKLLINSMHGVTGPYVKKIFLEELGAQPDNAVNTTPLPDF 83 (103)
Q Consensus 5 ~~g~~~~~-D~~~~Yi~~l~~~id~~~i~~~~~~~~~~~~lkVvvD~~nGa~~~~~~~ll~~~lG~~~v~~i~~~~Dg~F 83 (103)
+.|.+... |..+.|+++|++.+|. .++.. +||||+||+||+++.+++.+|+ +|||+ ++.+|+++||.|
T Consensus 142 ~~g~~~~~~~~~~~Y~~~l~~~i~~-~~~~~--------~lkVvvD~~~G~~~~~~~~ll~-~lg~~-v~~in~~~d~~~ 210 (443)
T TIGR01455 142 GLGRVKRYPDAVGRYIEFLKSTLPR-GLTLS--------GLKVVLDCANGAAYKVAPHVFR-ELGAE-VIAIGVEPDGLN 210 (443)
T ss_pred CceEEEEcccHHHHHHHHHHHHhhc-ccccC--------CCEEEEECCCchHHHHHHHHHH-HcCCE-EEEEccCCCCCC
Confidence 33666544 7899999999999884 24433 7999999999999999999999 99996 899999999999
Q ss_pred CCCCCCCcHHHHHHHHHhhC
Q psy5980 84 GGHHPDPNLTYAADLVQAMQ 103 (103)
Q Consensus 84 ~g~~PeP~~~nL~~L~~~V~ 103 (103)
|..+|. ++|+..|.+.|+
T Consensus 211 ~~~~~~--~~~l~~l~~~v~ 228 (443)
T TIGR01455 211 INDGCG--STHLDALQKAVR 228 (443)
T ss_pred CCCCCC--CCCHHHHHHHHh
Confidence 855443 478888887763
This model describes GlmM, phosphoglucosamine mutase, also designated in MrsA and YhbF E. coli, UreC in Helicobacter pylori, and femR315 or FemD in Staphlococcus aureus. It converts glucosamine-6-phosphate to glucosamine-1-phosphate as part of the pathway toward UDP-N-acetylglucosamine for peptidoglycan and lipopolysaccharides.
>PTZ00150 phosphoglucomutase-2-like protein; Provisional
Back Show alignment and domain information
Probab=99.55 E-value=1e-14 Score=119.98 Aligned_cols=82 Identities=20% Similarity=0.332 Sum_probs=69.7
Q ss_pred ecChHHHHHHHHhhcCchhHHhhhhCCCCCCCcEEEEeCCCCcchHHHHHHHHHhcCCCc--eeeecCccCCCCCCC-CC
Q psy5980 12 IDSVEVYLQLMKEIFDFPKLQSLIKGSSGRPPFKLLINSMHGVTGPYVKKIFLEELGAQP--DNAVNTTPLPDFGGH-HP 88 (103)
Q Consensus 12 ~D~~~~Yi~~l~~~id~~~i~~~~~~~~~~~~lkVvvD~~nGa~~~~~~~ll~~~lG~~~--v~~i~~~~Dg~F~g~-~P 88 (103)
.|+.+.|+++|.+.++.+.|+.. ++|||+|||||+|+.+++++|+ ++||+. ++.+++.|||+||+. .|
T Consensus 205 ~d~~~~Yi~~l~~~i~~~~i~~~--------~lkIv~d~~~G~g~~~~~~iL~-~lG~~~~~~v~~~~~pDg~Fp~~~~P 275 (584)
T PTZ00150 205 AEVSDAYFATLKSEYNPACCDRS--------KVKIVYTAMHGVGTRFVQKALH-TVGLPNLLSVAQQAEPDPEFPTVTFP 275 (584)
T ss_pred hhhHHHHHHHHHhhcChhhhccC--------CCeEEEeCCCCccHHHHHHHHH-hcCCCCceEeccccccCcCCCCCCCc
Confidence 36688999999999887656543 7999999999999999999999 999953 568899999999986 58
Q ss_pred CCc--HHHHHHHHHhh
Q psy5980 89 DPN--LTYAADLVQAM 102 (103)
Q Consensus 89 eP~--~~nL~~L~~~V 102 (103)
+|. +++|..+++.|
T Consensus 276 nPe~~~~~l~~~~~~v 291 (584)
T PTZ00150 276 NPEEGKGALKLSMETA 291 (584)
T ss_pred ChhhhHHHHHHHHHHH
Confidence 886 58898888876
>PRK14316 glmM phosphoglucosamine mutase; Provisional
Back Show alignment and domain information
Probab=99.53 E-value=3.6e-14 Score=113.02 Aligned_cols=81 Identities=22% Similarity=0.288 Sum_probs=66.7
Q ss_pred eeEEEe-cChHHHHHHHHhhcCchhHHhhhhCCCCCCCcEEEEeCCCCcchHHHHHHHHHhcCCCceeeecCccCCCCCC
Q psy5980 7 FQVDVI-DSVEVYLQLMKEIFDFPKLQSLIKGSSGRPPFKLLINSMHGVTGPYVKKIFLEELGAQPDNAVNTTPLPDFGG 85 (103)
Q Consensus 7 g~~~~~-D~~~~Yi~~l~~~id~~~i~~~~~~~~~~~~lkVvvD~~nGa~~~~~~~ll~~~lG~~~v~~i~~~~Dg~F~g 85 (103)
|.++.. |..+.|+++|.+.+|.+ + . ++|||+|||||+++.+++++|+ +|||+ ++.+|++|||.||+
T Consensus 147 g~~~~~~~~~~~Y~~~l~~~i~~~-~--~--------~lkvvvD~~nG~~~~~~~~ll~-~lg~~-v~~in~~~dg~~~~ 213 (448)
T PRK14316 147 GTVSDYPEGLRKYLQFLKSTIDED-L--S--------GLKVALDCANGATSSLAPRLFA-DLGAD-VTVIGTSPDGLNIN 213 (448)
T ss_pred eeEEEeCcHHHHHHHHHHHhcCcc-c--C--------CCEEEEECCCchhhHHHHHHHH-HcCCe-EEEEccCCCCCCCC
Confidence 555544 67899999999999863 1 1 6999999999999999999999 99995 89999999999987
Q ss_pred CCCCCcHHHHHHHHHhh
Q psy5980 86 HHPDPNLTYAADLVQAM 102 (103)
Q Consensus 86 ~~PeP~~~nL~~L~~~V 102 (103)
++|.| +++++|++.|
T Consensus 214 ~~~~~--~~~~~l~~~v 228 (448)
T PRK14316 214 DGVGS--THPEALQELV 228 (448)
T ss_pred CCCCC--CCHHHHHHHH
Confidence 76665 4556666665
>PRK14318 glmM phosphoglucosamine mutase; Provisional
Back Show alignment and domain information
Probab=99.53 E-value=2.7e-14 Score=113.92 Aligned_cols=82 Identities=18% Similarity=0.131 Sum_probs=67.6
Q ss_pred eeEEEe-cChHHHHHHHHhhcCchhHHhhhhCCCCCCCcEEEEeCCCCcchHHHHHHHHHhcCCCceeeecCccCCCCCC
Q psy5980 7 FQVDVI-DSVEVYLQLMKEIFDFPKLQSLIKGSSGRPPFKLLINSMHGVTGPYVKKIFLEELGAQPDNAVNTTPLPDFGG 85 (103)
Q Consensus 7 g~~~~~-D~~~~Yi~~l~~~id~~~i~~~~~~~~~~~~lkVvvD~~nGa~~~~~~~ll~~~lG~~~v~~i~~~~Dg~F~g 85 (103)
|.+... |..+.|+++|.+.++. +.. ++|||+||+||+++.+++++|+ +|||+ ++.+|+++||.||+
T Consensus 149 g~~~~~~~~~~~Y~~~l~~~i~~---~~~--------~~kVvvD~~nG~~~~~~~~ll~-~lG~~-v~~in~~~dg~~~~ 215 (448)
T PRK14318 149 GRVIDAPDATDRYLRHLLGALPT---RLD--------GLKVVVDCAHGAASGVAPEAYR-AAGAD-VIAINADPDGLNIN 215 (448)
T ss_pred ceEEECCcHHHHHHHHHHHHhcc---ccC--------CCEEEEECCCchHHHHHHHHHH-HcCCE-EEEeccCCCCCCCC
Confidence 656544 6889999999999873 222 7999999999999999999999 99996 88999999999975
Q ss_pred CCCCCcHHHHHHHHHhhC
Q psy5980 86 HHPDPNLTYAADLVQAMQ 103 (103)
Q Consensus 86 ~~PeP~~~nL~~L~~~V~ 103 (103)
..|. ++||++|++.|+
T Consensus 216 ~~~~--~~~l~~l~~~v~ 231 (448)
T PRK14318 216 DGCG--STHLEQLQAAVV 231 (448)
T ss_pred CCCC--CCCHHHHHHHHH
Confidence 5443 478888888763
>PRK14320 glmM phosphoglucosamine mutase; Provisional
Back Show alignment and domain information
Probab=99.52 E-value=4.2e-14 Score=112.67 Aligned_cols=84 Identities=12% Similarity=0.224 Sum_probs=69.1
Q ss_pred ceeEEEe-cChHHHHHHHHhhcCchhHHhhhhCCCCCCCcEEEEeCCCCcchHHHHHHHHHhcCCCceeeecCccCCCCC
Q psy5980 6 QFQVDVI-DSVEVYLQLMKEIFDFPKLQSLIKGSSGRPPFKLLINSMHGVTGPYVKKIFLEELGAQPDNAVNTTPLPDFG 84 (103)
Q Consensus 6 ~g~~~~~-D~~~~Yi~~l~~~id~~~i~~~~~~~~~~~~lkVvvD~~nGa~~~~~~~ll~~~lG~~~v~~i~~~~Dg~F~ 84 (103)
.|.++.. |..+.|+++|.+.++ .+++. ++|||+|||||+++.+++.+|+ +|||+ ++.+|+++||.|+
T Consensus 144 ~g~~~~~~~~~~~Y~~~l~~~~~--~~~~~--------~~kVvvD~~nG~~~~~~~~ll~-~lg~~-v~~i~~~~dg~~~ 211 (443)
T PRK14320 144 FGSYKILANAIDEYIESIHSRFA--KFVNY--------KGKVVVDCAHGAASHNFEALLD-KFGIN-YVSIASNPDGLNI 211 (443)
T ss_pred CcceEeccchHHHHHHHHHHHHH--hhccC--------CCEEEEECCCchHHHHHHHHHH-HcCCc-EEEECCcCCCCCC
Confidence 4666655 688999999998876 23322 5799999999999999999999 99995 8899999999997
Q ss_pred CCCCCCcHHHHHHHHHhhC
Q psy5980 85 GHHPDPNLTYAADLVQAMQ 103 (103)
Q Consensus 85 g~~PeP~~~nL~~L~~~V~ 103 (103)
+|+|.+++++.|+++|+
T Consensus 212 --~~~~~~~~l~~l~~~v~ 228 (443)
T PRK14320 212 --NVGCGATCVSNIKKAVK 228 (443)
T ss_pred --CCCCchHhHHHHHHHHH
Confidence 45555689999988773
>PRK14322 glmM phosphoglucosamine mutase; Provisional
Back Show alignment and domain information
Probab=99.51 E-value=5e-14 Score=111.85 Aligned_cols=83 Identities=18% Similarity=0.147 Sum_probs=67.2
Q ss_pred ceeEEEe-cChHHHHHHHHhhcCchhHHhhhhCCCCCCCcEEEEeCCCCcchHHHHHHHHHhcCCCceeeecCccCCCCC
Q psy5980 6 QFQVDVI-DSVEVYLQLMKEIFDFPKLQSLIKGSSGRPPFKLLINSMHGVTGPYVKKIFLEELGAQPDNAVNTTPLPDFG 84 (103)
Q Consensus 6 ~g~~~~~-D~~~~Yi~~l~~~id~~~i~~~~~~~~~~~~lkVvvD~~nGa~~~~~~~ll~~~lG~~~v~~i~~~~Dg~F~ 84 (103)
.|.+... +..+.|+++|.+.++. ++.. ++|||+||+||+++.+++++|+ +|||+ ++.+|+++||.|+
T Consensus 137 ~g~~~~~~~~~~~Y~~~l~~~v~~--~~~~--------~~kVvvD~~nG~~~~~~~~ll~-~lg~~-v~~ln~~~dg~~~ 204 (429)
T PRK14322 137 VGRTKSFREGRDMYIGAVLEMFRD--LDLT--------GEMVSLDLANGATTTTAKEVFE-FLGAK-VEVFNDSQDGLLI 204 (429)
T ss_pred ceeEEeccchHHHHHHHHHHhhcc--cccC--------CCEEEEECCCChHHHHHHHHHH-HcCCE-EEEECCcCCCCCC
Confidence 3666656 7889999999998872 2212 6999999999999999999999 99995 9999999999998
Q ss_pred CCCCCCcHHHHHHHHHhh
Q psy5980 85 GHHPDPNLTYAADLVQAM 102 (103)
Q Consensus 85 g~~PeP~~~nL~~L~~~V 102 (103)
+..+. ++|+.+|.+.|
T Consensus 205 ~~~~~--~~~l~~l~~~v 220 (429)
T PRK14322 205 NQGCG--ATHPRFLAEEM 220 (429)
T ss_pred CCCCC--cCCHHHHHHHH
Confidence 55443 46777777665
>PRK14319 glmM phosphoglucosamine mutase; Provisional
Back Show alignment and domain information
Probab=99.50 E-value=6.5e-14 Score=111.21 Aligned_cols=82 Identities=20% Similarity=0.122 Sum_probs=65.2
Q ss_pred eeEEEe-cChHHHHHHHHhhcCchhHHhhhhCCCCCCCcEEEEeCCCCcchHHHHHHHHHhcCCCceeeecCccCCCCCC
Q psy5980 7 FQVDVI-DSVEVYLQLMKEIFDFPKLQSLIKGSSGRPPFKLLINSMHGVTGPYVKKIFLEELGAQPDNAVNTTPLPDFGG 85 (103)
Q Consensus 7 g~~~~~-D~~~~Yi~~l~~~id~~~i~~~~~~~~~~~~lkVvvD~~nGa~~~~~~~ll~~~lG~~~v~~i~~~~Dg~F~g 85 (103)
|.+... +..+.|+++|.+.++. ++.. ++|||+||+||+++.+++.+|+ +|||+ ++.+|+++||.|++
T Consensus 135 g~~~~~~~~~~~Y~~~l~~~~~~--~~~~--------~~kvvvD~~nGa~~~~~~~ll~-~Lg~~-v~~ln~~~dg~~~~ 202 (430)
T PRK14319 135 GCVIDYKLAFEEYFNYIKQQYEG--LDLS--------GIKIVVDVANGATYELNPYILE-YFGAK-VEVVNNTPDGFNIN 202 (430)
T ss_pred eeEEeccchHHHHHHHHHHhcCc--cccC--------CCEEEEECCCChHHHHHHHHHH-HcCCE-EEEECCCCCCCCCC
Confidence 556555 4679999999999873 2222 7999999999999999999999 99995 98999999999987
Q ss_pred CCCCCcHHHHHHHHHhh
Q psy5980 86 HHPDPNLTYAADLVQAM 102 (103)
Q Consensus 86 ~~PeP~~~nL~~L~~~V 102 (103)
++|.| +|+++|.+.|
T Consensus 203 ~~~~~--~~~~~l~~~v 217 (430)
T PRK14319 203 VDCGS--THPENAKEKI 217 (430)
T ss_pred CCCCC--CCHHHHHHHH
Confidence 76654 4555555543
>PRK14323 glmM phosphoglucosamine mutase; Provisional
Back Show alignment and domain information
Probab=99.50 E-value=7.5e-14 Score=111.04 Aligned_cols=82 Identities=18% Similarity=0.136 Sum_probs=67.9
Q ss_pred ceeEEEe-cChHHHHHHHHhhcCchhHHhhhhCCCCCCCcEEEEeCCCCcchHHHHHHHHHhcCCCceeeecCccCCCCC
Q psy5980 6 QFQVDVI-DSVEVYLQLMKEIFDFPKLQSLIKGSSGRPPFKLLINSMHGVTGPYVKKIFLEELGAQPDNAVNTTPLPDFG 84 (103)
Q Consensus 6 ~g~~~~~-D~~~~Yi~~l~~~id~~~i~~~~~~~~~~~~lkVvvD~~nGa~~~~~~~ll~~~lG~~~v~~i~~~~Dg~F~ 84 (103)
.|.++.. |..+.|++++.+.++ .+ . ++|||+|||||+++.+++.+|+ +|||+ ++.+|+++||.|+
T Consensus 147 ~g~~~~~~~~~~~Y~~~l~~~~~--~~--~--------~~kVvvD~~~G~~~~~~~~ll~-~lG~~-v~~l~~~~dg~~~ 212 (440)
T PRK14323 147 IGSVSDFTEAERLYLDFLLSHAP--DL--S--------GLKVALDCANGAAYRLAPKVFQ-AAGAD-VFALFNTPDGRNI 212 (440)
T ss_pred ceeEEEhhhHHHHHHHHHHHhcc--cc--c--------CCEEEEECCCchHHHHHHHHHH-HcCCc-EEEEeccCCCCcC
Confidence 4777665 688999999998875 11 1 6999999999999999999999 99995 8899999999998
Q ss_pred CCCCCCcHHHHHHHHHhhC
Q psy5980 85 GHHPDPNLTYAADLVQAMQ 103 (103)
Q Consensus 85 g~~PeP~~~nL~~L~~~V~ 103 (103)
+++|. ++|+++|.+.|+
T Consensus 213 ~~~~~--~~~l~~l~~~v~ 229 (440)
T PRK14323 213 NRGCG--STHPEALQRFVV 229 (440)
T ss_pred CCCCC--CCCHHHHHHHHh
Confidence 66554 468888887764
>cd03088 ManB ManB is a bacterial phosphomannomutase (PMM) that catalyzes the conversion of mannose 6-phosphate to mannose-1-phosphate in the second of three steps in the GDP-mannose pathway, in which GDP-D-mannose is synthesized from fructose-6-phosphate
Back Show alignment and domain information
Probab=99.44 E-value=2.7e-13 Score=108.58 Aligned_cols=83 Identities=13% Similarity=0.130 Sum_probs=68.1
Q ss_pred eeEEEecChHHHHHHHHhhcCchhHHhhhhCCCCCCCcEEEEeCCCCcchHHHHHHHHHhcCCCceeeecCccCCCCCCC
Q psy5980 7 FQVDVIDSVEVYLQLMKEIFDFPKLQSLIKGSSGRPPFKLLINSMHGVTGPYVKKIFLEELGAQPDNAVNTTPLPDFGGH 86 (103)
Q Consensus 7 g~~~~~D~~~~Yi~~l~~~id~~~i~~~~~~~~~~~~lkVvvD~~nGa~~~~~~~ll~~~lG~~~v~~i~~~~Dg~F~g~ 86 (103)
+.+...+..+.|+++|.+.++.++++ ++|||+|||||+++.+++++|+ ++||+ ++.+|+. +.|+++
T Consensus 139 ~~~~~~~~~~~Y~~~l~~~i~~~~~~----------~lkIvvD~~~G~~~~~~~~ll~-~lG~~-v~~l~~~--~~~~~~ 204 (459)
T cd03088 139 LLPPDTDAADAYIARYTDFFGAGALK----------GLRIGVYQHSSVGRDLLVRILE-ALGAE-VVPLGRS--DTFIPV 204 (459)
T ss_pred CCcccchHHHHHHHHHHHHhCccccC----------CCEEEEECCCCCHHHHHHHHHH-HcCCe-EEEeCCC--CCCCCC
Confidence 33445578899999999999865442 6999999999999999999999 99996 8899875 467777
Q ss_pred CCCCc-HHHHHHHHHhhC
Q psy5980 87 HPDPN-LTYAADLVQAMQ 103 (103)
Q Consensus 87 ~PeP~-~~nL~~L~~~V~ 103 (103)
+|+|. +++|+.|++.|+
T Consensus 205 ~~~~~~~~~l~~l~~~v~ 222 (459)
T cd03088 205 DTEAVRPEDRALAAAWAA 222 (459)
T ss_pred CCCcCCHHHHHHHHHHHH
Confidence 77775 599999998773
In Mycobacterium tuberculosis, the causative agent of tuberculosis, PMM is involved in the biosynthesis of mannosylated lipoglycans that participate in the association of mycobacteria with host macrophage phagocytic receptors. ManB belongs to the the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include the phosphoglucomutases (PGM1 and PGM2), phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrall
>cd03086 PGM3 PGM3 (phosphoglucomutase 3), also known as PAGM (phosphoacetylglucosamine mutase) and AGM1 (N-acetylglucosamine-phosphate mutase), is an essential enzyme found in eukaryotes that reversibly catalyzes the conversion of GlcNAc-6-phosphate into GlcNAc-1-phosphate as part of the UDP-N-acetylglucosamine (UDP-GlcNAc) biosynthetic pathway
Back Show alignment and domain information
Probab=99.39 E-value=5.4e-13 Score=108.79 Aligned_cols=78 Identities=14% Similarity=0.149 Sum_probs=64.9
Q ss_pred hHHHHHHHHhh----cC-chhHHhhhhCCCCCCCcEEEEeCCCCcchHHHHHHHHHhcC--CCceeeecCccCCCCCCCC
Q psy5980 15 VEVYLQLMKEI----FD-FPKLQSLIKGSSGRPPFKLLINSMHGVTGPYVKKIFLEELG--AQPDNAVNTTPLPDFGGHH 87 (103)
Q Consensus 15 ~~~Yi~~l~~~----id-~~~i~~~~~~~~~~~~lkVvvD~~nGa~~~~~~~ll~~~lG--~~~v~~i~~~~Dg~F~g~~ 87 (103)
.+.|+++|.+. ++ .+.++.. ++||||||+||+|+.+++++|+ +|| +. ++.||++|||.| +++
T Consensus 162 ~~~Y~~~l~~~f~~lv~~~~~~~~~--------~~kVvvD~aNGag~~~~~~ll~-~Lg~~~~-v~~in~~~dg~~-~~n 230 (513)
T cd03086 162 EEGYYEKLSKAFNELYNLLQDGGDE--------PEKLVVDCANGVGALKLKELLK-RLKKGLS-VKIINDGEEGPE-LLN 230 (513)
T ss_pred HHHHHHHHHHHHHHHHhhccccccC--------CCEEEEECCCcHHHHHHHHHHH-HcCCCcE-EEEEccCCCCcc-cCC
Confidence 56799999877 66 4444433 7999999999999999999999 999 85 999999999997 566
Q ss_pred CCCcHHHHHHHHHhhC
Q psy5980 88 PDPNLTYAADLVQAMQ 103 (103)
Q Consensus 88 PeP~~~nL~~L~~~V~ 103 (103)
++|.++|++.|++.++
T Consensus 231 ~~~ga~~l~~l~~~v~ 246 (513)
T cd03086 231 DGCGADYVKTKQKPPR 246 (513)
T ss_pred CCcccccHHHHHHHHH
Confidence 6666899999987763
UDP-GlcNAc is an essential metabolite that serves as the biosynthetic precursor of many glycoproteins and mucopolysaccharides. AGM1 is a member of the alpha-D-phosphohexomutase superfamily, which catalyzes the intramolecular phosphoryl transfer of sugar substrates. The alpha-D-phosphohexomutases have four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.
>COG0033 Pgm Phosphoglucomutase [Carbohydrate transport and metabolism]
Back Show alignment and domain information
Probab=99.26 E-value=9e-12 Score=100.07 Aligned_cols=77 Identities=39% Similarity=0.635 Sum_probs=70.1
Q ss_pred eeEEEecChHHHHHHHHhhcCchhHHhhhhCCCCCCCcEEEEeCCCCcchHHHHHHHHHhcCCCceeeecCccCCCCCCC
Q psy5980 7 FQVDVIDSVEVYLQLMKEIFDFPKLQSLIKGSSGRPPFKLLINSMHGVTGPYVKKIFLEELGAQPDNAVNTTPLPDFGGH 86 (103)
Q Consensus 7 g~~~~~D~~~~Yi~~l~~~id~~~i~~~~~~~~~~~~lkVvvD~~nGa~~~~~~~ll~~~lG~~~v~~i~~~~Dg~F~g~ 86 (103)
..++.+|+..+|++.|.+.||+++||++ .+++++|+|+|++++|+.+|+++++|....+.-|..|-|.|+++
T Consensus 176 ~~v~~~D~v~~Yv~~l~~i~D~daIr~~--------~~~l~~D~l~g~t~~Y~~~I~e~~~~~~t~v~~~~~p~~~F~~l 247 (524)
T COG0033 176 LTVKIIDPVKDYVELLEEIFDFDAIRKA--------GLRLGFDPLGGVTGPYWKAIAEKYLLNLTGVNQNVDPTPDFMGL 247 (524)
T ss_pred ceeeeecchHHHHHHHHHhhcHHHHHHH--------HhhcccccccCccchhHHHHHHHhcCCchhhccCcccCccccCC
Confidence 4478999999999999999999999998 78899999999999999999998887655667788899999999
Q ss_pred CCCCc
Q psy5980 87 HPDPN 91 (103)
Q Consensus 87 ~PeP~ 91 (103)
+|+|.
T Consensus 248 ~~D~n 252 (524)
T COG0033 248 DPDGN 252 (524)
T ss_pred CCCCC
Confidence 99997
>KOG1220|consensus
Back Show alignment and domain information
Probab=98.63 E-value=1.5e-07 Score=77.77 Aligned_cols=80 Identities=23% Similarity=0.335 Sum_probs=58.4
Q ss_pred hHHHHHHHHhhcCchhHHhhhhCCCCCCCcEEEEeCCCCcchHHHHHHHHHhcCCCc--eeeecCccCCCCCC-CCCCCc
Q psy5980 15 VEVYLQLMKEIFDFPKLQSLIKGSSGRPPFKLLINSMHGVTGPYVKKIFLEELGAQP--DNAVNTTPLPDFGG-HHPDPN 91 (103)
Q Consensus 15 ~~~Yi~~l~~~id~~~i~~~~~~~~~~~~lkVvvD~~nGa~~~~~~~ll~~~lG~~~--v~~i~~~~Dg~F~g-~~PeP~ 91 (103)
.+.|.+.+.+.++--- +..-. ..++++|+++|||+|+.++..+|. .+|+.. .....++|||.||. +-|+|.
T Consensus 224 ~~~~~e~~k~~l~~~~-~e~n~----~s~~~fVyta~hGvG~~F~~~al~-~~~~~~~~~v~eq~~Pdp~FPt~~~PNPE 297 (607)
T KOG1220|consen 224 IPPYFEVYKELLPCFH-REANP----LSGLKFVYTAGHGVGGFFVKKALE-KLGLDTMISVPEQLEPDPMFPTVPFPNPE 297 (607)
T ss_pred chHHHHHHHhcCccHh-hhhcc----CCCceEEEecCCCccHHHHHHHHH-HhCCCccccchhhcCCCCCCCCCCCCCcc
Confidence 3567888877665211 11101 126999999999999999999999 999875 45678999999999 679998
Q ss_pred H-HHHHHHHH
Q psy5980 92 L-TYAADLVQ 100 (103)
Q Consensus 92 ~-~nL~~L~~ 100 (103)
+ ..|+--++
T Consensus 298 ek~aL~ls~~ 307 (607)
T KOG1220|consen 298 EKGALDLSIK 307 (607)
T ss_pred hHHHHHHHHH
Confidence 7 44444333
>PTZ00302 N-acetylglucosamine-phosphate mutase; Provisional
Back Show alignment and domain information
Probab=98.55 E-value=1e-07 Score=79.25 Aligned_cols=83 Identities=18% Similarity=0.238 Sum_probs=58.9
Q ss_pred hHHHHHHHHhhcCchhHHhhhhCCC-----CCCCcEEEEeCCCCcchHHHHHHHHHhc---CCCceeeecCccCCCCCCC
Q psy5980 15 VEVYLQLMKEIFDFPKLQSLIKGSS-----GRPPFKLLINSMHGVTGPYVKKIFLEEL---GAQPDNAVNTTPLPDFGGH 86 (103)
Q Consensus 15 ~~~Yi~~l~~~id~~~i~~~~~~~~-----~~~~lkVvvD~~nGa~~~~~~~ll~~~l---G~~~v~~i~~~~Dg~F~g~ 86 (103)
.+.|.+++.+.|. .+.+...... ....-+|+|||+||+|+..++++++ .| |+. ++.+|+++|+.| +
T Consensus 214 e~~Y~~~~~~~f~--~l~~~~~~~~~~~~~~~~~~kVvVD~ANGvg~~~~~~ll~-~L~~~g~~-v~~in~~~dg~~--~ 287 (585)
T PTZ00302 214 DELYYAYLLAAFK--ELYRTLQEGGPVDLTQNNSKILVVDCANGVGGYKIKRFFE-ALKQLGIE-IIPININCDEEE--L 287 (585)
T ss_pred HHHHHHHHHHHHH--HHHhhCCccccccccccCCCeEEEECCCcHHHHHHHHHHH-HhhhCCCE-EEEEecCCCCCC--C
Confidence 3668888876544 2221111000 0012489999999999999999999 88 774 999999999987 5
Q ss_pred CCCCc-HHHHHHHHHhhC
Q psy5980 87 HPDPN-LTYAADLVQAMQ 103 (103)
Q Consensus 87 ~PeP~-~~nL~~L~~~V~ 103 (103)
.++|. +++++.++++++
T Consensus 288 lN~~cGad~vk~lq~~p~ 305 (585)
T PTZ00302 288 LNDKCGADYVQKTRKPPR 305 (585)
T ss_pred CCCCCccccHHHHHHHHH
Confidence 66666 699999888763
>PLN02895 phosphoacetylglucosamine mutase
Back Show alignment and domain information
Probab=98.48 E-value=2.5e-07 Score=76.65 Aligned_cols=79 Identities=18% Similarity=0.199 Sum_probs=56.8
Q ss_pred hHHHHHHHHhhcCchhHHhhhhCC--CCCCCcEEEEeCCCCcchHHHHHHHHHhcCCCcee-eecCccCCCCCCCCCCCc
Q psy5980 15 VEVYLQLMKEIFDFPKLQSLIKGS--SGRPPFKLLINSMHGVTGPYVKKIFLEELGAQPDN-AVNTTPLPDFGGHHPDPN 91 (103)
Q Consensus 15 ~~~Yi~~l~~~id~~~i~~~~~~~--~~~~~lkVvvD~~nGa~~~~~~~ll~~~lG~~~v~-~i~~~~Dg~F~g~~PeP~ 91 (103)
.+.|.+.+.+.|. .+....... ..+.+.||+|||+||+|+..++++++ .||+. ++ .+|+++||.| +.|+|.
T Consensus 184 e~~Y~~~l~~~f~--~l~~~~~~~~~~~~~~~kvvVDcANGvg~~~~~~l~~-~Lg~~-~i~~iN~~~dG~~--~lN~~c 257 (562)
T PLN02895 184 ESDYFEQLSSSFR--ALLDLIPNGSGDDRADDKLVVDGANGVGAEKLETLKK-ALGGL-DLEVRNSGKEGEG--VLNEGV 257 (562)
T ss_pred HHHHHHHHHHHHH--HHHhcCCCccccccCCCEEEEECCCcHHHHHHHHHHH-HCCCc-EEEEeecCCCCCC--CCCCCC
Confidence 4668888876543 221110000 00113689999999999999999999 99986 55 8999999988 778887
Q ss_pred -HHHHHHHH
Q psy5980 92 -LTYAADLV 99 (103)
Q Consensus 92 -~~nL~~L~ 99 (103)
+++++.++
T Consensus 258 Gad~v~~lq 266 (562)
T PLN02895 258 GADFVQKEK 266 (562)
T ss_pred ccCcHHHHH
Confidence 58888887
>KOG2537|consensus
Back Show alignment and domain information
Probab=84.80 E-value=1.9 Score=36.04 Aligned_cols=62 Identities=21% Similarity=0.203 Sum_probs=37.1
Q ss_pred hHHHHHHHHhhcCchhHHhhhhCCCCCCCcEEEEeCCCCcchHHHHHHHHHhcC-CCceeeecCccC
Q psy5980 15 VEVYLQLMKEIFDFPKLQSLIKGSSGRPPFKLLINSMHGVTGPYVKKIFLEELG-AQPDNAVNTTPL 80 (103)
Q Consensus 15 ~~~Yi~~l~~~id~~~i~~~~~~~~~~~~lkVvvD~~nGa~~~~~~~ll~~~lG-~~~v~~i~~~~D 80 (103)
.+.|++.+.+.+....... ...+....|+.|||.||.|++-+..+.. -.. .-.+..+|...|
T Consensus 186 ~~~Y~~~ls~af~~l~~~~---~~~~~~~~k~~VD~ANGvG~~klk~l~~-i~~~~l~vEivNd~~d 248 (539)
T KOG2537|consen 186 EEGYYSKLSKAFNELRNIT---QESGDEVSKLIVDCANGVGAPKLKELLG-IDSGLLNVEVVNDGID 248 (539)
T ss_pred cccHHHHHHHHHHHhhhhc---cccCCccceEEEECccccchHHHHHHhc-cCCCcCceEEEcCCCC
Confidence 4678888877665322111 1111124599999999999987765543 221 112667787776
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Back Show alignment and domain information
Probab=84.15 E-value=4.5 Score=32.20 Aligned_cols=59 Identities=17% Similarity=0.263 Sum_probs=35.8
Q ss_pred CcEEEEeCCCCcc-hHHHHHHHH--HhcCCCc--eeeecCccCCCCCCCCCCCcHHHHHHHHHhh
Q psy5980 43 PFKLLINSMHGVT-GPYVKKIFL--EELGAQP--DNAVNTTPLPDFGGHHPDPNLTYAADLVQAM 102 (103)
Q Consensus 43 ~lkVvvD~~nGa~-~~~~~~ll~--~~lG~~~--v~~i~~~~Dg~F~g~~PeP~~~nL~~L~~~V 102 (103)
++.|++|+.|++| +.+++.+-+ -.+|+ + +++.|.+||-....+.--=.++.+.+|.+.+
T Consensus 271 ~lPVi~DpsH~~G~sd~~~~~a~AAva~GA-dGliIE~H~~pd~AlsD~~qsl~p~~~~~l~~~i 334 (352)
T PRK13396 271 HLPIMIDPSHGTGKSEYVPSMAMAAIAAGT-DSLMIEVHPNPAKALSDGPQSLTPDRFDRLMQEL 334 (352)
T ss_pred CCCEEECCcccCCcHHHHHHHHHHHHhhCC-CeEEEEecCCcccCCChhhhcCCHHHHHHHHHHH
Confidence 6899999999998 333333221 15676 4 6678888877766332111245666665543
>PRK08673 3-deoxy-7-phosphoheptulonate synthase; Reviewed
Back Show alignment and domain information
Probab=81.94 E-value=7.2 Score=30.78 Aligned_cols=59 Identities=10% Similarity=0.116 Sum_probs=36.9
Q ss_pred CcEEEEeCCCCcch----HHHHHHHHHhcCCC-ceeeecCccCCCCCCCCCCCcHHHHHHHHHhh
Q psy5980 43 PFKLLINSMHGVTG----PYVKKIFLEELGAQ-PDNAVNTTPLPDFGGHHPDPNLTYAADLVQAM 102 (103)
Q Consensus 43 ~lkVvvD~~nGa~~----~~~~~ll~~~lG~~-~v~~i~~~~Dg~F~g~~PeP~~~nL~~L~~~V 102 (103)
++.|++||.|+.|. ..++..-- .+|++ -+++.|.+||-..+.+.--=.++.+.+|.+.+
T Consensus 262 ~lPVi~d~sH~~G~~~~v~~~a~AAv-A~GAdGliIE~H~~pd~alsD~~~sl~p~e~~~lv~~i 325 (335)
T PRK08673 262 HLPVIVDPSHATGKRDLVEPLALAAV-AAGADGLIVEVHPDPEKALSDGPQSLTPEEFEELMKKL 325 (335)
T ss_pred CCCEEEeCCCCCccccchHHHHHHHH-HhCCCEEEEEecCCcccCCCcchhcCCHHHHHHHHHHH
Confidence 68999999999885 12223333 67873 17788888888875442112245666665543
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
ID Alignment Graph Length
Definition
E-value Query 103
d3pmga2 113
c.84.1.1 (A:191-303) Phosphoglucomutase {Rabbit (O
8e-16 d1kfia2 118
c.84.1.1 (A:206-323) Exocytosis-sensitive phosphop
9e-14
>d3pmga2 c.84.1.1 (A:191-303) Phosphoglucomutase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 113
Back Hide information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Phosphoglucomutase, first 3 domains
superfamily: Phosphoglucomutase, first 3 domains
family: Phosphoglucomutase, first 3 domains
domain: Phosphoglucomutase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 65.2 bits (158), Expect = 8e-16
Identities = 52/88 (59%), Positives = 64/88 (72%), Gaps = 3/88 (3%)
Query: 15 VEVYLQLMKEIFDFPKLQSLIKGSSGRPPFKLLINSMHGVTGPYVKKIFLEELGAQPDNA 74
VE Y +++ IFDF L+ L+ G + K+ I++MHGV GPYVKKI EELGA ++A
Sbjct: 1 VEAYATMLRNIFDFNALKELLSGPNR---LKIRIDAMHGVVGPYVKKILCEELGAPANSA 57
Query: 75 VNTTPLPDFGGHHPDPNLTYAADLVQAM 102
VN PL DFGGHHPDPNLTYAADLV+ M
Sbjct: 58 VNCVPLEDFGGHHPDPNLTYAADLVETM 85
>d1kfia2 c.84.1.1 (A:206-323) Exocytosis-sensitive phosphoprotein, pp63/parafusin {Paramecium tetraurelia [TaxId: 5888]} Length = 118
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Phosphoglucomutase, first 3 domains
superfamily: Phosphoglucomutase, first 3 domains
family: Phosphoglucomutase, first 3 domains
domain: Exocytosis-sensitive phosphoprotein, pp63/parafusin
species: Paramecium tetraurelia [TaxId: 5888]
Score = 60.2 bits (145), Expect = 9e-14
Identities = 41/89 (46%), Positives = 52/89 (58%), Gaps = 4/89 (4%)
Query: 15 VEVYLQLMKEIFDFPKLQSLIKGSSGRPPFKLLINSMHGVTGPYVKKIFLEELGAQPDNA 74
V+ Y QLM+++FDF L+ L F + MHGV GPY K IF LG ++
Sbjct: 1 VQDYTQLMQKLFDFDLLKGLFSNK----DFSFRFDGMHGVAGPYAKHIFGTLLGCSKESL 56
Query: 75 VNTTPLPDFGGHHPDPNLTYAADLVQAMQ 103
+N P DFGG HPDPNLTYA DLV+ +
Sbjct: 57 LNCDPSEDFGGGHPDPNLTYAHDLVELLD 85
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
ID Alignment Graph Length
Definition
Probability Query 103
d3pmga2 113
Phosphoglucomutase {Rabbit (Oryctolagus cuniculus)
99.88 d1kfia2 118
Exocytosis-sensitive phosphoprotein, pp63/parafusi
99.87 d1p5dx2 104
Phosphomannomutase/phosphoglucomutase {Pseudomonas
99.85
>d3pmga2 c.84.1.1 (A:191-303) Phosphoglucomutase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Back Hide information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Phosphoglucomutase, first 3 domains
superfamily: Phosphoglucomutase, first 3 domains
family: Phosphoglucomutase, first 3 domains
domain: Phosphoglucomutase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.88 E-value=1.2e-23 Score=138.23 Aligned_cols=86 Identities=60% Similarity=1.061 Sum_probs=73.4
Q ss_pred hHHHHHHHHhhcCchhHHhhhhCCCCCCCcEEEEeCCCCcchHHHHHHHHHhcCCCceeeecCccCCCCCCCCCCCcHHH
Q psy5980 15 VEVYLQLMKEIFDFPKLQSLIKGSSGRPPFKLLINSMHGVTGPYVKKIFLEELGAQPDNAVNTTPLPDFGGHHPDPNLTY 94 (103)
Q Consensus 15 ~~~Yi~~l~~~id~~~i~~~~~~~~~~~~lkVvvD~~nGa~~~~~~~ll~~~lG~~~v~~i~~~~Dg~F~g~~PeP~~~n 94 (103)
+++|+++|++.+|+++|++.++. ..+|||++||||||++.+++++|.+.+|+..++.+|++|||.||+|+|||.+++
T Consensus 1 ie~Y~~~l~~~id~~~I~~~~~~---~~~lkIv~D~~nGa~~~~~~~il~~~~g~~~~~~~~~~pd~~f~~~~p~p~~~~ 77 (113)
T d3pmga2 1 VEAYATMLRNIFDFNALKELLSG---PNRLKIRIDAMHGVVGPYVKKILCEELGAPANSAVNCVPLEDFGGHHPDPNLTY 77 (113)
T ss_dssp SHHHHHHHHTTSCHHHHHHHHHS---TTCCCEEEECTTSTTHHHHHHHHTTTTCCCGGGEESCSCCTTGGGSCCCCSTTT
T ss_pred CHHHHHHHHHhcCHHHHHHHhcc---CCCcEEEEECCCCccccchHHHHHHhcCCceEEEecCccCCCCCcccCccchhH
Confidence 37899999999999999874332 117999999999999999999996478986345799999999999999999999
Q ss_pred HHHHHHhhC
Q psy5980 95 AADLVQAMQ 103 (103)
Q Consensus 95 L~~L~~~V~ 103 (103)
+..|++.|+
T Consensus 78 ~~~l~~~~~ 86 (113)
T d3pmga2 78 AADLVETMK 86 (113)
T ss_dssp THHHHHHHH
T ss_pred HHHHHHHhh
Confidence 999988763
>d1kfia2 c.84.1.1 (A:206-323) Exocytosis-sensitive phosphoprotein, pp63/parafusin {Paramecium tetraurelia [TaxId: 5888]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Phosphoglucomutase, first 3 domains
superfamily: Phosphoglucomutase, first 3 domains
family: Phosphoglucomutase, first 3 domains
domain: Exocytosis-sensitive phosphoprotein, pp63/parafusin
species: Paramecium tetraurelia [TaxId: 5888]
Probab=99.87 E-value=1e-22 Score=134.46 Aligned_cols=84 Identities=49% Similarity=0.872 Sum_probs=69.7
Q ss_pred hHHHHHHHHhhcCchhHHhhhhCCCCCCCcEEEEeCCCCcchHHHHHHHHHhcCCCceeeecCccCCCCCCCCCCCcHHH
Q psy5980 15 VEVYLQLMKEIFDFPKLQSLIKGSSGRPPFKLLINSMHGVTGPYVKKIFLEELGAQPDNAVNTTPLPDFGGHHPDPNLTY 94 (103)
Q Consensus 15 ~~~Yi~~l~~~id~~~i~~~~~~~~~~~~lkVvvD~~nGa~~~~~~~ll~~~lG~~~v~~i~~~~Dg~F~g~~PeP~~~n 94 (103)
+++|+++|++.+|+++|++.+.+ .+|||++|||||||+.+++++|++.+++..++.+|++|||.||+++|||.+++
T Consensus 1 v~dY~~~l~~~~d~~~Ik~~~~~----~~lkvv~D~~nGa~~~~~~~il~~~~~~~~~~~~~~~pD~~F~~~~p~p~~~~ 76 (118)
T d1kfia2 1 VQDYTQLMQKLFDFDLLKGLFSN----KDFSFRFDGMHGVAGPYAKHIFGTLLGCSKESLLNCDPSEDFGGGHPDPNLTY 76 (118)
T ss_dssp SHHHHHHHHHHSCHHHHHHHHTC----TTCCEEEECTTSTHHHHHHHHHTTTTCCCGGGEESCSCCTTGGGSCCCCSTTT
T ss_pred CHHHHHHHHHhcCHHHHHhhhcc----CCCEEEEeCCCCCccCcChHHHHHhCCCceeEEeccccCCcccCcccCCCCcC
Confidence 36899999999999999864332 27999999999999999999998344444456789999999999999999888
Q ss_pred HHHHHHhh
Q psy5980 95 AADLVQAM 102 (103)
Q Consensus 95 L~~L~~~V 102 (103)
+.++.+.+
T Consensus 77 ~~~l~~~l 84 (118)
T d1kfia2 77 AHDLVELL 84 (118)
T ss_dssp THHHHHHT
T ss_pred hhhHHHHH
Confidence 77776554
>d1p5dx2 c.84.1.1 (X:155-258) Phosphomannomutase/phosphoglucomutase {Pseudomonas aeruginosa [TaxId: 287]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Phosphoglucomutase, first 3 domains
superfamily: Phosphoglucomutase, first 3 domains
family: Phosphoglucomutase, first 3 domains
domain: Phosphomannomutase/phosphoglucomutase
species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.85 E-value=4.1e-22 Score=129.19 Aligned_cols=76 Identities=21% Similarity=0.423 Sum_probs=68.4
Q ss_pred ChHHHHHHHHhhcCchhHHhhhhCCCCCCCcEEEEeCCCCcchHHHHHHHHHhcCCCceeeecCccCCCCCCCCCCCc-H
Q psy5980 14 SVEVYLQLMKEIFDFPKLQSLIKGSSGRPPFKLLINSMHGVTGPYVKKIFLEELGAQPDNAVNTTPLPDFGGHHPDPN-L 92 (103)
Q Consensus 14 ~~~~Yi~~l~~~id~~~i~~~~~~~~~~~~lkVvvD~~nGa~~~~~~~ll~~~lG~~~v~~i~~~~Dg~F~g~~PeP~-~ 92 (103)
+.++|+++|.+.++.. + ++|||+|||||||+.+++++|+ ++|+. ++.+|++|||.||+++|+|. +
T Consensus 1 i~~~Yi~~i~~~i~~~-------~-----~lkvvvD~~nGa~~~~~~~ll~-~~~~~-~~~~~~~pd~~f~~~~p~p~~~ 66 (104)
T d1p5dx2 1 ILPRYFKQIRDDIAMA-------K-----PMKVVVDCGNGVAGVIAPQLIE-ALGCS-VIPLYCEVDGNFPNHHPDPGKP 66 (104)
T ss_dssp CHHHHHHHHHTTCCCS-------S-----CEEEEEECTTSGGGGTHHHHHH-HHHEE-EEEESCSCCTTCCSSCSCTTSG
T ss_pred ChHHHHHHHHHhhhhc-------C-----CCEEEEECCcchhHHHHHHHHh-hcCCe-EEEecccCCCCCCCcCCCCCCH
Confidence 4689999999998753 2 7999999999999999999999 99985 88999999999999999997 6
Q ss_pred HHHHHHHHhhC
Q psy5980 93 TYAADLVQAMQ 103 (103)
Q Consensus 93 ~nL~~L~~~V~ 103 (103)
+||.++.+.|+
T Consensus 67 ~~l~~~~~~v~ 77 (104)
T d1p5dx2 67 ENLKDLIAKVK 77 (104)
T ss_dssp GGGHHHHHHHH
T ss_pred HHHHHHHHHhh
Confidence 89999998874
