Psyllid ID: psy5991

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220---
Protein Sequence
MLEEWLNHYRRLQTKTSISRLTSKYFVCFFSEIENLPPSIQEQLFDELLDKEAQQQLEAEPHPVINWSHELLDKEAQQQLEAEPHPVINWSHEVTAHLYALWNRSAGDCLLDSLMQATWGVFDRENVLRRALADSLAQASHLFYPRWKEYEDMHASLLHFSLDESQWEEDWASLVSLASQPGAALEQLHVFALAHILRRPIIVYGVKYVKSFRGEDIGYARFE
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHcccccccccccccccEEEEEEcccccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHcccEEEEEEEEEEccccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHccHHHHcccccccEHccHHcccHHHHHHHHHHHHcHHHHHHHHccccccEcccHHHHHHHHHHHHHHcccccHccHHHccccEEEEEccccccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccEEEEEccEEEccccccccccccc
Coil and Loop (DISEMBL)
MLEEWLNHYRRLQTKTSISRLTSKYFVCFFseienlppsiQEQLFDELLDKEAQQQleaephpvinwshELLDKEAQQQleaephpvinwsHEVTAHLYALWNRSAGDCLLDSLMQATWGVFDRENVLRRALADSLAQASHLFYPRWKEYEDMHASLLHfsldesqwEEDWASLVSLASQPGAALEQLHVFALAHILRRPIIVYGVKYVKsfrgedigyarfe
Flexible Loop (DISEMBL)
MLEEWLNHYrrlqtktsisrlTSKYFVCFFSEIENLPPSIQEQLFDELLDKEAQQQLEAEPHPVINWSHELLDKEAQQQLEAEPHPVINWSHEVTAHLYALWNRSAGDCLLDSLMQATWGVFDRENVLRRALADSLAQASHLFYPRWKEYEDMHASLLHFSLDESQWEEDWASLVSLASQPGAALEQLHVFALAHILRRPIIVYGVKYVKsfrgedigyarfe
Low Complexity Region (SEG)
MLEEWLNHYRRLQTKTSISRLTSKYFVCFFSEIENLPPSIQEQLFDELLDKEAQQQLEAEPHPVINWSHELLDKEAQQQLEAEPHPVINWSHEVTAHLYALWNRSAGDCLLDSLMQATWGVFDRENVLRRALADSLAQASHLFYPRWKEYEDMHASLLHFSLDESQWEEDWASLVSLASQPGAALEQLHVFALAHILRRPIIVYGVKYVKSFRGEDIGYARFE
Disordered region (IsUnstruct)
****WLNHYRRLQTKTSISRLTSKYFVCFFSEIENLPPSIQEQLFDE****************VINWSHEL*************HPVINWSHEVTAHLYALWNRSAGDCLLDSLMQATWGVFDRENVLRRALADSLAQASHLFYPRWKEYEDMHASLLHFSLDESQWEEDWASLVSLASQPGAALEQLHVFALAHILRRPIIVYGVKYVKSFRGEDIGY****
Disordered Region (DISOPRED)
*LEEW**HYRRLQTKTSISRLTSKYFVCFFSEIENLPPSIQEQLFDELLDKEAQQ*LE***HPVINWSHELLDKEAQQQLEAEPHPVINWSHEVTAHLYALWNRSAGDCLLDSLMQATWGVFDRENVLRRALADSLAQASHLFYPRWKEYEDMHASLLHFSLDESQWEEDWASLVSLASQPGAALEQLHVFALAHILRRPIIVYGVKYVKSFRGED***A***
Disordered Region (DISEMBL)
MLEEWLNHYRRLQTKTSISRLTSKYFVCFFSEIENLPPSIQEQLFDELLDKEAQQQLEAEPHPVINWSHELLDKEAQQQLEAEPHPVINWSHEVTAHLYALWNRSAGDCLLDSLMQATWGVFDRENVLRRALADSLAQASHLFYPRWKEYEDMHASLLHFSLDESQWEEDWASLVSLASQPGAALEQLHVFALAHILRRPIIVYGVKYVKSFRGEDIGYARFE
Disordered Region (DISPRO)
MLEEWLNHYRRLQTKTSISRLTSKYFVCFFSEIENLPPSIQEQLFDELLDKEAQQQLEAEPHPVINWSHELLDKEAQQQLEAEPHPVINWSHEVTAHLYALWNRSAGDCLLDSLMQATWGVFDRENVLRRALADSLAQASHLFYPRWKEYEDMHASLLHFSLDESQWEEDWASLVSLASQPGAALEQLHVFALAHILRRPIIVYGVKYVKSFRGEDIGYARFE
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLEEWLNHYRRLQTKTSISRLTSKYFVCFFSEIENLPPSIQEQLFDELLDKEAQQQLEAEPHPVINWSHELLDKEAQQQLEAEPHPVINWSHEVTAHLYALWNRSAGDCLLDSLMQATWGVFDRENVLRRALADSLAQASHLFYPRWKEYEDMHASLLHFSLDESQWEEDWASLVSLASQPGAALEQLHVFALAHILRRPIIVYGVKYVKSFRGEDIGYARFE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	223	2.2.26 [Sep-21-2011]
Q9VH90	778	Ubiquitin thioesterase tr	yes	N/A	0.757	0.217	0.644	3e-68
Q6NUB7	701	Ubiquitin thioesterase zr	N/A	N/A	0.780	0.248	0.537	5e-60
Q5U595	701	Ubiquitin thioesterase zr	N/A	N/A	0.780	0.248	0.537	7e-60
B1H2Q2	701	Ubiquitin thioesterase zr	yes	N/A	0.780	0.248	0.537	7e-60
A6QP16	708	Ubiquitin thioesterase ZR	yes	N/A	0.780	0.245	0.532	1e-59
Q7M760	708	Ubiquitin thioesterase Zr	yes	N/A	0.780	0.245	0.532	1e-59
Q9UGI0	708	Ubiquitin thioesterase ZR	yes	N/A	0.780	0.245	0.532	1e-59
A0JMQ9	716	Ubiquitin thioesterase zr	yes	N/A	0.780	0.243	0.537	2e-59
Q60769	775	Tumor necrosis factor alp	no	N/A	0.609	0.175	0.356	3e-15
Q4R8W3	790	Tumor necrosis factor alp	N/A	N/A	0.609	0.172	0.356	2e-14

>sp|Q9VH90|TRBID_DROME Ubiquitin thioesterase trabid OS=Drosophila melanogaster GN=trbd PE=1 SV=1

 Score =  258 bits (658), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 127/197 (64%), Positives = 152/197 (77%), Gaps = 28/197 (14%)

Query: 31  SEIENLPPSIQEQLFDELLDKEAQQQLEAEPHPVINWSHELLDKEAQQQLEAEPHPVINW 90
           +EIE LP  IQEQL+DELLD++A                       Q+QLE  P P +NW
Sbjct: 460 AEIEELPIPIQEQLYDELLDRDA-----------------------QKQLETPP-PALNW 495

Query: 91  SHEVTAHL----YALWNRSAGDCLLDSLMQATWGVFDRENVLRRALADSLAQASHLFYPR 146
           S E+TA L    + LWNRSAGDCLLDS MQATWGVFDR+N+LRRALAD+L Q  H+F+ R
Sbjct: 496 SLEITARLSSRMFVLWNRSAGDCLLDSAMQATWGVFDRDNILRRALADTLHQCGHVFFTR 555

Query: 147 WKEYEDMHASLLHFSLDESQWEEDWASLVSLASQPGAALEQLHVFALAHILRRPIIVYGV 206
           WKEYE + AS+LHF+L++SQ+EEDW++L+SLA QPG++LEQLH+FALAHILRRPIIVYGV
Sbjct: 556 WKEYEMLQASMLHFTLEDSQFEEDWSTLLSLAGQPGSSLEQLHIFALAHILRRPIIVYGV 615

Query: 207 KYVKSFRGEDIGYARFE 223
           KYVKSFRGEDIGYARFE
Sbjct: 616 KYVKSFRGEDIGYARFE 632

Positive regulator of the Wnt signaling pathway. Specifically cleaves 'Lys-63'-linked ubiquitin chains. May act by deubiquitinating APC protein, a negative regulator of Wnt-mediated transcription (By similarity). Required for an efficient wg response, but not for other signaling responses, in the eye.
Drosophila melanogaster (taxid: 7227)
EC: 3EC: .EC: 4EC: .EC: 1EC: 9EC: .EC: 1EC: 2

>sp|Q6NUB7|ZRN1B_XENLA Ubiquitin thioesterase zranb1-B OS=Xenopus laevis GN=zranb1-b PE=2 SV=1

 Score =  230 bits (587), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 115/214 (53%), Positives = 149/214 (69%), Gaps = 40/214 (18%)

Query: 26  FVCFF----------SEIENLPPSIQEQLFDELLDKEAQQQLEAEPHPVINWSHELLDKE 75
           F C+F          ++IE+LPP++QE+LFDE+LD++ Q++LE E               
Sbjct: 363 FACYFLTDLVTFTLPADIEDLPPTVQEKLFDEVLDRDVQKELEEE--------------- 407

Query: 76  AQQQLEAEPHPVINWSHEVT----AHLYALWNRSAGDCLLDSLMQATWGVFDRENVLRRA 131
                     P+INWS E+     + LYALWNR+AGDCLLDS++QATWG++D+++VLR+A
Sbjct: 408 ---------SPIINWSLELGTRLDSRLYALWNRTAGDCLLDSVLQATWGIYDKDSVLRKA 458

Query: 132 LADSLAQASHLFYPRWKEYEDMHASL--LHFSLDESQWEEDWASLVSLASQPGAALEQLH 189
           L DSL   SH FY RWKE+E  ++    LHFSL E QW+EDWA ++SLASQPGA+LEQ H
Sbjct: 459 LHDSLRDCSHWFYSRWKEWESWYSQSFGLHFSLREEQWQEDWAFILSLASQPGASLEQTH 518

Query: 190 VFALAHILRRPIIVYGVKYVKSFRGEDIGYARFE 223
           +F LAHILRRPIIVYGVKY KSFRGE +GY RF+
Sbjct: 519 IFVLAHILRRPIIVYGVKYYKSFRGETLGYTRFQ 552

Positive regulator of the Wnt signaling pathway that specifically cleaves 'Lys-63'-linked ubiquitin chains. Acts by deubiquitinating APC protein, a negative regulator of Wnt-mediated transcription. May play a role in the regulation of cell morphology and cytoskeletal organization. Required in the stress fiber dynamics and cell migration.

Xenopus laevis (taxid: 8355)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 9

EC: .

EC: 1

EC: 2

>sp|Q5U595|ZRN1A_XENLA Ubiquitin thioesterase zranb1-A OS=Xenopus laevis GN=zranb1-a PE=2 SV=1

 Score =  230 bits (586), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 115/214 (53%), Positives = 149/214 (69%), Gaps = 40/214 (18%)

Query: 26  FVCFF----------SEIENLPPSIQEQLFDELLDKEAQQQLEAEPHPVINWSHELLDKE 75
           F C+F          ++IE+LPP++QE+LFDE+LD++ Q++LE E               
Sbjct: 363 FACYFLTDLVTFTLPADIEDLPPTVQEKLFDEVLDRDVQKELEEE--------------- 407

Query: 76  AQQQLEAEPHPVINWSHEVT----AHLYALWNRSAGDCLLDSLMQATWGVFDRENVLRRA 131
                     P+INWS E+     + LYALWNR+AGDCLLDS++QATWG++D+++VLR+A
Sbjct: 408 ---------SPIINWSLELGTRLDSRLYALWNRTAGDCLLDSVLQATWGIYDKDSVLRKA 458

Query: 132 LADSLAQASHLFYPRWKEYEDMHASL--LHFSLDESQWEEDWASLVSLASQPGAALEQLH 189
           L DSL   SH FY RWKE+E  ++    LHFSL E QW+EDWA ++SLASQPGA+LEQ H
Sbjct: 459 LHDSLHDCSHWFYSRWKEWESWYSQSFGLHFSLREEQWQEDWAFILSLASQPGASLEQTH 518

Query: 190 VFALAHILRRPIIVYGVKYVKSFRGEDIGYARFE 223
           +F LAHILRRPIIVYGVKY KSFRGE +GY RF+
Sbjct: 519 IFVLAHILRRPIIVYGVKYYKSFRGETLGYTRFQ 552

Positive regulator of the Wnt signaling pathway that specifically cleaves 'Lys-63'-linked ubiquitin chains. Acts by deubiquitinating APC protein, a negative regulator of Wnt-mediated transcription. May play a role in the regulation of cell morphology and cytoskeletal organization. Required in the stress fiber dynamics and cell migration.

Xenopus laevis (taxid: 8355)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 9

EC: .

EC: 1

EC: 2

>sp|B1H2Q2|ZRAN1_XENTR Ubiquitin thioesterase zranb1 OS=Xenopus tropicalis GN=zranb1 PE=2 SV=1

 Score =  230 bits (586), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 115/214 (53%), Positives = 149/214 (69%), Gaps = 40/214 (18%)

Query: 26  FVCFF----------SEIENLPPSIQEQLFDELLDKEAQQQLEAEPHPVINWSHELLDKE 75
           F C+F          ++IE+LPP++QE+LFDE+LD++ Q++LE E               
Sbjct: 363 FACYFLTDLVTFTLPADIEDLPPTVQEKLFDEVLDRDVQKELEEE--------------- 407

Query: 76  AQQQLEAEPHPVINWSHEVT----AHLYALWNRSAGDCLLDSLMQATWGVFDRENVLRRA 131
                     P+INWS E+     + LYALWNR+AGDCLLDS++QATWG++D+++VLR+A
Sbjct: 408 ---------SPIINWSLELGTRLDSRLYALWNRTAGDCLLDSVLQATWGIYDKDSVLRKA 458

Query: 132 LADSLAQASHLFYPRWKEYEDMHASL--LHFSLDESQWEEDWASLVSLASQPGAALEQLH 189
           L DSL   SH FY RWKE+E  ++    LHFSL E QW+EDWA ++SLASQPGA+LEQ H
Sbjct: 459 LHDSLHDCSHWFYSRWKEWESWYSQSFGLHFSLREEQWQEDWAFILSLASQPGASLEQTH 518

Query: 190 VFALAHILRRPIIVYGVKYVKSFRGEDIGYARFE 223
           +F LAHILRRPIIVYGVKY KSFRGE +GY RF+
Sbjct: 519 IFVLAHILRRPIIVYGVKYYKSFRGETLGYTRFQ 552

Positive regulator of the Wnt signaling pathway that specifically cleaves 'Lys-63'-linked ubiquitin chains. Acts by deubiquitinating APC protein, a negative regulator of Wnt-mediated transcription. May play a role in the regulation of cell morphology and cytoskeletal organization. Required in the stress fiber dynamics and cell migration.

Xenopus tropicalis (taxid: 8364)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 9

EC: .

EC: 1

EC: 2

>sp|A6QP16|ZRAN1_BOVIN Ubiquitin thioesterase ZRANB1 OS=Bos taurus GN=ZRANB1 PE=2 SV=1

 Score =  229 bits (584), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 114/214 (53%), Positives = 149/214 (69%), Gaps = 40/214 (18%)

Query: 26  FVCFF----------SEIENLPPSIQEQLFDELLDKEAQQQLEAEPHPVINWSHELLDKE 75
           F C+F          ++IE+LPP++QE+LFDE+LD++ Q++LE E               
Sbjct: 370 FACYFLTDLVTFTLPADIEDLPPTVQEKLFDEVLDRDVQKELEEE--------------- 414

Query: 76  AQQQLEAEPHPVINWSHEVT----AHLYALWNRSAGDCLLDSLMQATWGVFDRENVLRRA 131
                     P+INWS E+     + LYALWNR+AGDCLLDS++QATWG++D+++VLR+A
Sbjct: 415 ---------SPIINWSLELATRLDSRLYALWNRTAGDCLLDSVLQATWGIYDKDSVLRKA 465

Query: 132 LADSLAQASHLFYPRWKEYEDMHASL--LHFSLDESQWEEDWASLVSLASQPGAALEQLH 189
           L DSL   SH FY RWK++E  ++    LHFSL E QW+EDWA ++SLASQPGA+LEQ H
Sbjct: 466 LHDSLHDCSHWFYTRWKDWESWYSQSFGLHFSLREEQWQEDWAFILSLASQPGASLEQTH 525

Query: 190 VFALAHILRRPIIVYGVKYVKSFRGEDIGYARFE 223
           +F LAHILRRPIIVYGVKY KSFRGE +GY RF+
Sbjct: 526 IFVLAHILRRPIIVYGVKYYKSFRGETLGYTRFQ 559

Positive regulator of the Wnt signaling pathway that specifically cleaves 'Lys-63'-linked ubiquitin chains. Acts by deubiquitinating APC protein, a negative regulator of Wnt-mediated and cell migration. transcription. Plays a role in the regulation of cell morphology and cytoskeletal organization. Required in the stress fiber dynamics and cell migration. May also modulate TNF-alpha signaling.

Bos taurus (taxid: 9913)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 9

EC: .

EC: 1

EC: 2

>sp|Q7M760|ZRAN1_MOUSE Ubiquitin thioesterase Zranb1 OS=Mus musculus GN=Zranb1 PE=2 SV=1

 Score =  229 bits (584), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 114/214 (53%), Positives = 149/214 (69%), Gaps = 40/214 (18%)

Query: 26  FVCFF----------SEIENLPPSIQEQLFDELLDKEAQQQLEAEPHPVINWSHELLDKE 75
           F C+F          ++IE+LPP++QE+LFDE+LD++ Q++LE E               
Sbjct: 370 FACYFLTDLVTFTLPADIEDLPPTVQEKLFDEVLDRDVQKELEEE--------------- 414

Query: 76  AQQQLEAEPHPVINWSHEVT----AHLYALWNRSAGDCLLDSLMQATWGVFDRENVLRRA 131
                     P+INWS E+     + LYALWNR+AGDCLLDS++QATWG++D+++VLR+A
Sbjct: 415 ---------SPIINWSLELATRLDSRLYALWNRTAGDCLLDSVLQATWGIYDKDSVLRKA 465

Query: 132 LADSLAQASHLFYPRWKEYEDMHASL--LHFSLDESQWEEDWASLVSLASQPGAALEQLH 189
           L DSL   SH FY RWK++E  ++    LHFSL E QW+EDWA ++SLASQPGA+LEQ H
Sbjct: 466 LHDSLHDCSHWFYTRWKDWESWYSQSFGLHFSLREEQWQEDWAFILSLASQPGASLEQTH 525

Query: 190 VFALAHILRRPIIVYGVKYVKSFRGEDIGYARFE 223
           +F LAHILRRPIIVYGVKY KSFRGE +GY RF+
Sbjct: 526 IFVLAHILRRPIIVYGVKYYKSFRGETLGYTRFQ 559

Positive regulator of the Wnt signaling pathway that specifically cleaves 'Lys-63'-linked ubiquitin chains. Acts by deubiquitinating APC protein, a negative regulator of Wnt-mediated transcription. Plays a role in the regulation of cell morphology and cytoskeletal organization. Required in the stress fiber dynamics and cell migration. May also modulate TNF-alpha signaling.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 9

EC: .

EC: 1

EC: 2

>sp|Q9UGI0|ZRAN1_HUMAN Ubiquitin thioesterase ZRANB1 OS=Homo sapiens GN=ZRANB1 PE=1 SV=2

 Score =  229 bits (584), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 114/214 (53%), Positives = 149/214 (69%), Gaps = 40/214 (18%)

Query: 26  FVCFF----------SEIENLPPSIQEQLFDELLDKEAQQQLEAEPHPVINWSHELLDKE 75
           F C+F          ++IE+LPP++QE+LFDE+LD++ Q++LE E               
Sbjct: 370 FACYFLTDLVTFTLPADIEDLPPTVQEKLFDEVLDRDVQKELEEE--------------- 414

Query: 76  AQQQLEAEPHPVINWSHEVT----AHLYALWNRSAGDCLLDSLMQATWGVFDRENVLRRA 131
                     P+INWS E+     + LYALWNR+AGDCLLDS++QATWG++D+++VLR+A
Sbjct: 415 ---------SPIINWSLELATRLDSRLYALWNRTAGDCLLDSVLQATWGIYDKDSVLRKA 465

Query: 132 LADSLAQASHLFYPRWKEYEDMHASL--LHFSLDESQWEEDWASLVSLASQPGAALEQLH 189
           L DSL   SH FY RWK++E  ++    LHFSL E QW+EDWA ++SLASQPGA+LEQ H
Sbjct: 466 LHDSLHDCSHWFYTRWKDWESWYSQSFGLHFSLREEQWQEDWAFILSLASQPGASLEQTH 525

Query: 190 VFALAHILRRPIIVYGVKYVKSFRGEDIGYARFE 223
           +F LAHILRRPIIVYGVKY KSFRGE +GY RF+
Sbjct: 526 IFVLAHILRRPIIVYGVKYYKSFRGETLGYTRFQ 559

Positive regulator of the Wnt signaling pathway that specifically cleaves 'Lys-63'-linked ubiquitin chains. Acts by deubiquitinating APC protein, a negative regulator of Wnt-mediated transcription. Plays a role in the regulation of cell morphology and cytoskeletal organization. Required in the stress fiber dynamics and cell migration. May also modulate TNF-alpha signaling.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 9

EC: .

EC: 1

EC: 2

>sp|A0JMQ9|ZRN1B_DANRE Ubiquitin thioesterase zranb1-B OS=Danio rerio GN=zranb1b PE=2 SV=1

 Score =  228 bits (582), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 115/214 (53%), Positives = 149/214 (69%), Gaps = 40/214 (18%)

Query: 26  FVCFF----------SEIENLPPSIQEQLFDELLDKEAQQQLEAEPHPVINWSHELLDKE 75
           F C+F          ++IE+LPP++QE+LFDE+LD++ Q++LE E               
Sbjct: 378 FPCYFFTDLVTFTLPADIEDLPPNVQEKLFDEVLDRDVQKELEEE--------------- 422

Query: 76  AQQQLEAEPHPVINWSHEVT----AHLYALWNRSAGDCLLDSLMQATWGVFDRENVLRRA 131
                     P+INWS E+     + LYALWNR+AGDCLLDS++QATWG++D+++VLR++
Sbjct: 423 ---------SPIINWSLELGTRLDSRLYALWNRTAGDCLLDSVLQATWGIYDKDSVLRKS 473

Query: 132 LADSLAQASHLFYPRWKEYEDMHASL--LHFSLDESQWEEDWASLVSLASQPGAALEQLH 189
           L DSL   SH FY RWKE+E  ++    LHFSL E QW+EDWA ++SLASQPGA+LEQ H
Sbjct: 474 LNDSLHDCSHWFYTRWKEWESWYSQSFGLHFSLREEQWQEDWAFILSLASQPGASLEQTH 533

Query: 190 VFALAHILRRPIIVYGVKYVKSFRGEDIGYARFE 223
           VF LAHILRRPIIVYGVKY KSFRGE +GY RF+
Sbjct: 534 VFVLAHILRRPIIVYGVKYYKSFRGETLGYTRFQ 567

Positive regulator of the Wnt signaling pathway that specifically cleaves 'Lys-63'-linked ubiquitin chains. Acts by deubiquitinating APC protein, a negative regulator of Wnt-mediated transcription. May play a role in the regulation of cell morphology and cytoskeletal organization. Required in the stress fiber dynamics and cell migration.

Danio rerio (taxid: 7955)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 9

EC: .

EC: 1

EC: 2

>sp|Q60769|TNAP3_MOUSE Tumor necrosis factor alpha-induced protein 3 OS=Mus musculus GN=Tnfaip3 PE=1 SV=2

 Score = 82.0 bits (201), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 56/157 (35%), Positives = 83/157 (52%), Gaps = 21/157 (13%)

Query: 71  LLDKEAQQQLEAEPHPVINWSHEVTAHLYALWNRSAGDCLLDSLMQATWGVFDRENVLRR 130
           L+D+  Q  LE++    +NW  EV   L AL     G+CL+ +  Q  WGV D + VLR+
Sbjct: 68  LIDRSVQASLESQKK--LNWCREVR-KLVALKTNGDGNCLMHAACQYMWGVQDTDLVLRK 124

Query: 131 ALADSLAQA-SHLFYPRW-----KEYEDMHASLLHFSLDESQWEEDWASLVSLAS--QPG 182
           AL  +L +  +  F  RW     K  E +   L +   D   W ++W +LV +AS   P 
Sbjct: 125 ALCSTLKETDTRNFKFRWQLESLKSQEFVETGLCY---DTRNWNDEWDNLVKMASADTPA 181

Query: 183 A-------ALEQLHVFALAHILRRPIIVYGVKYVKSF 212
           A       +LE++H+F L++ILRRPIIV   K ++S 
Sbjct: 182 ARSGLQYNSLEEIHIFVLSNILRRPIIVISDKMLRSL 218

Ubiquitin-editing enzyme that contains both ubiquitin ligase and deubiquitinase activities. Essential component of a ubiquitin-editing protein complex, comprising also RNF11, ITCH and TAX1BP1, that ensures the transient nature of inflammatory signaling pathways. Upon TNF stimulation, deubiquitinates 'Lys-63'-polyubiquitin chains on RIPK1 and catalyzes the formation of 'Lys-48'-polyubiquitin chains. This leads to RIPK1 proteasomal degradation and consequently termination of the TNF- or LPS-mediated activation of NF-kappa-B. In vitro able to deubiquitinate both 'Lys-48'- and 'Lys-63' polyubiquitin chains. Inhibitor of programmed cell death. Has a role in the function of the lymphoid system.

Mus musculus (taxid: 10090)

EC: 6

EC: .

EC: 3

EC: .

EC: 2

EC: .

EC: -

>sp|Q4R8W3|TNAP3_MACFA Tumor necrosis factor alpha-induced protein 3 OS=Macaca fascicularis GN=TNFAIP3 PE=2 SV=1

 Score = 79.0 bits (193), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 56/157 (35%), Positives = 82/157 (52%), Gaps = 21/157 (13%)

Query: 71  LLDKEAQQQLEAEPHPVINWSHEVTAHLYALWNRSAGDCLLDSLMQATWGVFDRENVLRR 130
           L+DK  Q  LE++    +NW  EV   L AL     G+CL+ +  Q  WGV D + VLR+
Sbjct: 68  LIDKNIQASLESQKK--LNWCREVR-KLVALKTNGDGNCLMHATSQYMWGVQDTDLVLRK 124

Query: 131 ALADSLAQA-SHLFYPRW-----KEYEDMHASLLHFSLDESQWEEDWASLVSLASQ--PG 182
           AL  +L +  +  F  RW     K  E +   L +   D   W ++W +L+ +AS   P 
Sbjct: 125 ALFSTLKETDTRNFKFRWQLESLKSQEFVETGLCY---DTRNWNDEWDNLIKMASTDTPM 181

Query: 183 A-------ALEQLHVFALAHILRRPIIVYGVKYVKSF 212
           A       +LE++H+F L +ILRRPIIV   K ++S 
Sbjct: 182 ARSGLQYNSLEEIHIFVLCNILRRPIIVISDKMLRSL 218

Ubiquitin-editing enzyme that contains both ubiquitin ligase and deubiquitinase activities. Essential component of a ubiquitin-editing protein complex, comprising also RNF11, ITCH and TAX1BP1, that ensures the transient nature of inflammatory signaling pathways. Upon TNF stimulation, deubiquitinates 'Lys-63'-polyubiquitin chains on RIPK1 and catalyzes the formation of 'Lys-48'-polyubiquitin chains. This leads to RIPK1 proteasomal degradation and consequently termination of the TNF- or LPS-mediated activation of NF-kappa-B. In vitro able to deubiquitinate both 'Lys-48'- and 'Lys-63' polyubiquitin chains. Inhibitor of programmed cell death. Has a role in the function of the lymphoid system.

Macaca fascicularis (taxid: 9541)

EC: 6

EC: .

EC: 3

EC: .

EC: 2

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	223
242017900	818	conserved hypothetical protein [Pediculu	0.825	0.224	0.621	1e-69
195053836	814	GH21890 [Drosophila grimshawi] gi|193895	0.757	0.207	0.664	5e-68
195113931	775	GI21936 [Drosophila mojavensis] gi|19391	0.757	0.218	0.659	8e-68
195399752	795	GJ14295 [Drosophila virilis] gi|19414204	0.757	0.212	0.659	9e-68
194767639	770	GF11562 [Drosophila ananassae] gi|190619	0.757	0.219	0.649	1e-67
198450582	789	GA21793 [Drosophila pseudoobscura pseudo	0.757	0.214	0.649	2e-67
195166146	786	GL27321 [Drosophila persimilis] gi|19410	0.757	0.215	0.649	2e-67
195446178	780	GK10914 [Drosophila willistoni] gi|19416	0.757	0.216	0.649	2e-67
91090986	656	PREDICTED: similar to CG9448 CG9448-PA [	0.757	0.257	0.664	4e-67
194902854	778	GG17341 [Drosophila erecta] gi|190652477	0.757	0.217	0.649	7e-67

>gi|242017900|ref|XP_002429422.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212514348|gb|EEB16684.1| conserved hypothetical protein [Pediculus humanus corporis]

 Score =  268 bits (685), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 138/222 (62%), Positives = 159/222 (71%), Gaps = 38/222 (17%)

Query: 16  TSISRLTSKYFVCFF----------SEIENLPPSIQEQLFDELLDKEAQQQLEAEPHPVI 65
           +S  R     F C+F          +E+E+L   IQ+QLF+ELLDKE             
Sbjct: 492 SSTLRQRKGSFPCYFVTESATFALPAEVEDLSTPIQDQLFEELLDKEV------------ 539

Query: 66  NWSHELLDKEAQQQLEAEPHPVINWSHEVT----AHLYALWNRSAGDCLLDSLMQATWGV 121
                      Q QLE++P PV+NWS E+T    + LYALWNRSAGDCLLDS MQATWGV
Sbjct: 540 -----------QSQLESDP-PVLNWSLEITVRLGSRLYALWNRSAGDCLLDSAMQATWGV 587

Query: 122 FDRENVLRRALADSLAQASHLFYPRWKEYEDMHASLLHFSLDESQWEEDWASLVSLASQP 181
           FDRENVLRRALADSL Q  HLFYPRWKEYE   ASLLHF++DE+Q+EEDWA L+SLASQP
Sbjct: 588 FDRENVLRRALADSLHQGGHLFYPRWKEYESSQASLLHFTMDETQYEEDWAGLLSLASQP 647

Query: 182 GAALEQLHVFALAHILRRPIIVYGVKYVKSFRGEDIGYARFE 223
           GA+L+QLHVFAL+HILRRPIIVYGVKYVKSFRGE +G ARFE
Sbjct: 648 GASLDQLHVFALSHILRRPIIVYGVKYVKSFRGETLGLARFE 689

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195053836|ref|XP_001993832.1| GH21890 [Drosophila grimshawi] gi|193895702|gb|EDV94568.1| GH21890 [Drosophila grimshawi]

 Score =  263 bits (671), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 131/197 (66%), Positives = 153/197 (77%), Gaps = 28/197 (14%)

Query: 31  SEIENLPPSIQEQLFDELLDKEAQQQLEAEPHPVINWSHELLDKEAQQQLEAEPHPVINW 90
           SEIE LP  IQEQL+DELLD++A                       Q+QLE  P P +NW
Sbjct: 496 SEIEELPIPIQEQLYDELLDRDA-----------------------QKQLEMPP-PALNW 531

Query: 91  SHEVTAHLYA----LWNRSAGDCLLDSLMQATWGVFDRENVLRRALADSLAQASHLFYPR 146
           S E+TA L +    LWNRSAGDCLLDS MQATWGVFDR+N+LRRALAD+L Q  H+F+ R
Sbjct: 532 SLEITARLSSRLLVLWNRSAGDCLLDSAMQATWGVFDRDNILRRALADTLHQCGHVFFTR 591

Query: 147 WKEYEDMHASLLHFSLDESQWEEDWASLVSLASQPGAALEQLHVFALAHILRRPIIVYGV 206
           WKEYE + AS+LHF+L+ESQWEEDW++L+SLASQPG++LEQLH+FALAHILRRPIIVYGV
Sbjct: 592 WKEYEMLQASMLHFTLEESQWEEDWSTLLSLASQPGSSLEQLHIFALAHILRRPIIVYGV 651

Query: 207 KYVKSFRGEDIGYARFE 223
           KYVKSFRGEDIGYARFE
Sbjct: 652 KYVKSFRGEDIGYARFE 668

Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195113931|ref|XP_002001521.1| GI21936 [Drosophila mojavensis] gi|193918115|gb|EDW16982.1| GI21936 [Drosophila mojavensis]

 Score =  262 bits (669), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 130/197 (65%), Positives = 153/197 (77%), Gaps = 28/197 (14%)

Query: 31  SEIENLPPSIQEQLFDELLDKEAQQQLEAEPHPVINWSHELLDKEAQQQLEAEPHPVINW 90
           SEIE LP  IQEQL+DELLD++A                       Q+QLE  P P +NW
Sbjct: 457 SEIEELPIPIQEQLYDELLDRDA-----------------------QKQLEVPP-PALNW 492

Query: 91  SHEVTAHLYA----LWNRSAGDCLLDSLMQATWGVFDRENVLRRALADSLAQASHLFYPR 146
           S E+TA L +    LWNRSAGDCLLDS MQATWGVFDR+N+LRRALAD+L Q  H+F+ R
Sbjct: 493 SLEITARLSSRLLVLWNRSAGDCLLDSAMQATWGVFDRDNILRRALADTLHQCGHVFFTR 552

Query: 147 WKEYEDMHASLLHFSLDESQWEEDWASLVSLASQPGAALEQLHVFALAHILRRPIIVYGV 206
           WKEYE + AS+LHF+L++SQWEEDW++L+SLASQPG++LEQLH+FALAHILRRPIIVYGV
Sbjct: 553 WKEYEMLQASMLHFTLEDSQWEEDWSTLLSLASQPGSSLEQLHIFALAHILRRPIIVYGV 612

Query: 207 KYVKSFRGEDIGYARFE 223
           KYVKSFRGEDIGYARFE
Sbjct: 613 KYVKSFRGEDIGYARFE 629

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195399752|ref|XP_002058483.1| GJ14295 [Drosophila virilis] gi|194142043|gb|EDW58451.1| GJ14295 [Drosophila virilis]

 Score =  262 bits (669), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 130/197 (65%), Positives = 153/197 (77%), Gaps = 28/197 (14%)

Query: 31  SEIENLPPSIQEQLFDELLDKEAQQQLEAEPHPVINWSHELLDKEAQQQLEAEPHPVINW 90
           SEIE LP  IQEQL+DELLD++A                       Q+QLE  P P +NW
Sbjct: 477 SEIEELPIPIQEQLYDELLDRDA-----------------------QKQLEMPP-PALNW 512

Query: 91  SHEVTAHLYA----LWNRSAGDCLLDSLMQATWGVFDRENVLRRALADSLAQASHLFYPR 146
           S E+TA L +    LWNRSAGDCLLDS MQATWGVFDR+N+LRRALAD+L Q  H+F+ R
Sbjct: 513 SLEITARLSSRLLVLWNRSAGDCLLDSAMQATWGVFDRDNILRRALADTLHQCGHVFFAR 572

Query: 147 WKEYEDMHASLLHFSLDESQWEEDWASLVSLASQPGAALEQLHVFALAHILRRPIIVYGV 206
           WKEYE + AS+LHF+L++SQWEEDW++L+SLASQPG++LEQLH+FALAHILRRPIIVYGV
Sbjct: 573 WKEYEMLQASMLHFTLEDSQWEEDWSTLLSLASQPGSSLEQLHIFALAHILRRPIIVYGV 632

Query: 207 KYVKSFRGEDIGYARFE 223
           KYVKSFRGEDIGYARFE
Sbjct: 633 KYVKSFRGEDIGYARFE 649

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194767639|ref|XP_001965922.1| GF11562 [Drosophila ananassae] gi|190619765|gb|EDV35289.1| GF11562 [Drosophila ananassae]

 Score =  261 bits (667), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 128/197 (64%), Positives = 153/197 (77%), Gaps = 28/197 (14%)

Query: 31  SEIENLPPSIQEQLFDELLDKEAQQQLEAEPHPVINWSHELLDKEAQQQLEAEPHPVINW 90
           +EIE LP  IQEQL+DELLD++A                       Q+QLE  P P +NW
Sbjct: 452 AEIEELPIPIQEQLYDELLDRDA-----------------------QKQLE-NPPPALNW 487

Query: 91  SHEVTAHL----YALWNRSAGDCLLDSLMQATWGVFDRENVLRRALADSLAQASHLFYPR 146
           S E+TA L    + LWNRSAGDCLLDS MQATWGVFDR+N+LRRALAD+L Q  H+F+ R
Sbjct: 488 SMEITARLSSRMFVLWNRSAGDCLLDSAMQATWGVFDRDNILRRALADTLHQCGHVFFTR 547

Query: 147 WKEYEDMHASLLHFSLDESQWEEDWASLVSLASQPGAALEQLHVFALAHILRRPIIVYGV 206
           WKEYE + A++LHF+L++SQWEEDW++L+SLASQPG++LEQLH+FALAHILRRPIIVYGV
Sbjct: 548 WKEYEMLQAAMLHFTLEDSQWEEDWSTLLSLASQPGSSLEQLHIFALAHILRRPIIVYGV 607

Query: 207 KYVKSFRGEDIGYARFE 223
           KYVKSFRGEDIGYARFE
Sbjct: 608 KYVKSFRGEDIGYARFE 624

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|198450582|ref|XP_001358049.2| GA21793 [Drosophila pseudoobscura pseudoobscura] gi|198131097|gb|EAL27186.2| GA21793 [Drosophila pseudoobscura pseudoobscura]

 Score =  261 bits (667), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 128/197 (64%), Positives = 152/197 (77%), Gaps = 28/197 (14%)

Query: 31  SEIENLPPSIQEQLFDELLDKEAQQQLEAEPHPVINWSHELLDKEAQQQLEAEPHPVINW 90
           +EIE LP  IQEQL+DELLD++A                       Q+QLE  P P +NW
Sbjct: 471 AEIEELPIPIQEQLYDELLDRDA-----------------------QKQLETPP-PALNW 506

Query: 91  SHEVTAHL----YALWNRSAGDCLLDSLMQATWGVFDRENVLRRALADSLAQASHLFYPR 146
           S E+TA L    + LWNRSAGDCLLDS MQATWGVFDR+N+LRR LAD+L Q  H+F+ R
Sbjct: 507 SLEITARLSSRMFVLWNRSAGDCLLDSAMQATWGVFDRDNILRRTLADTLHQCGHVFFTR 566

Query: 147 WKEYEDMHASLLHFSLDESQWEEDWASLVSLASQPGAALEQLHVFALAHILRRPIIVYGV 206
           WKEYE + AS+LHF+L+ESQWE+DW++L+SLASQPG++LEQLH+FALAHILRRPIIVYGV
Sbjct: 567 WKEYEMLQASMLHFTLEESQWEDDWSTLLSLASQPGSSLEQLHIFALAHILRRPIIVYGV 626

Query: 207 KYVKSFRGEDIGYARFE 223
           KYVKSFRGEDIGYARFE
Sbjct: 627 KYVKSFRGEDIGYARFE 643

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195166146|ref|XP_002023896.1| GL27321 [Drosophila persimilis] gi|194106056|gb|EDW28099.1| GL27321 [Drosophila persimilis]

 Score =  261 bits (666), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 128/197 (64%), Positives = 152/197 (77%), Gaps = 28/197 (14%)

Query: 31  SEIENLPPSIQEQLFDELLDKEAQQQLEAEPHPVINWSHELLDKEAQQQLEAEPHPVINW 90
           +EIE LP  IQEQL+DELLD++A                       Q+QLE  P P +NW
Sbjct: 468 AEIEELPIPIQEQLYDELLDRDA-----------------------QKQLETPP-PALNW 503

Query: 91  SHEVTAHL----YALWNRSAGDCLLDSLMQATWGVFDRENVLRRALADSLAQASHLFYPR 146
           S E+TA L    + LWNRSAGDCLLDS MQATWGVFDR+N+LRR LAD+L Q  H+F+ R
Sbjct: 504 SLEITARLSSRMFVLWNRSAGDCLLDSAMQATWGVFDRDNILRRTLADTLHQCGHVFFTR 563

Query: 147 WKEYEDMHASLLHFSLDESQWEEDWASLVSLASQPGAALEQLHVFALAHILRRPIIVYGV 206
           WKEYE + AS+LHF+L+ESQWE+DW++L+SLASQPG++LEQLH+FALAHILRRPIIVYGV
Sbjct: 564 WKEYEMLQASMLHFTLEESQWEDDWSTLLSLASQPGSSLEQLHIFALAHILRRPIIVYGV 623

Query: 207 KYVKSFRGEDIGYARFE 223
           KYVKSFRGEDIGYARFE
Sbjct: 624 KYVKSFRGEDIGYARFE 640

Source: Drosophila persimilis

Species: Drosophila persimilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195446178|ref|XP_002070663.1| GK10914 [Drosophila willistoni] gi|194166748|gb|EDW81649.1| GK10914 [Drosophila willistoni]

 Score =  261 bits (666), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 128/197 (64%), Positives = 154/197 (78%), Gaps = 28/197 (14%)

Query: 31  SEIENLPPSIQEQLFDELLDKEAQQQLEAEPHPVINWSHELLDKEAQQQLEAEPHPVINW 90
           +EIE LP  IQ+QL+DELLD++A                       Q+QLE+ P P +NW
Sbjct: 462 AEIEELPIQIQDQLYDELLDRDA-----------------------QKQLESPP-PALNW 497

Query: 91  SHEVTAHLYA----LWNRSAGDCLLDSLMQATWGVFDRENVLRRALADSLAQASHLFYPR 146
           S E+TA L +    LWNRSAGDCLLDS MQATWGVFDR+N+LRRALAD+L Q  H+F+ R
Sbjct: 498 SLEITARLSSRLLVLWNRSAGDCLLDSAMQATWGVFDRDNILRRALADTLHQCGHVFFTR 557

Query: 147 WKEYEDMHASLLHFSLDESQWEEDWASLVSLASQPGAALEQLHVFALAHILRRPIIVYGV 206
           WKEYE + AS+LHF+L++SQWEEDW++L+SLASQPG++LEQLH+FALAHILRRPIIVYGV
Sbjct: 558 WKEYEMLQASMLHFTLEDSQWEEDWSTLLSLASQPGSSLEQLHIFALAHILRRPIIVYGV 617

Query: 207 KYVKSFRGEDIGYARFE 223
           KYVKSFRGEDIGYARFE
Sbjct: 618 KYVKSFRGEDIGYARFE 634

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91090986|ref|XP_974863.1| PREDICTED: similar to CG9448 CG9448-PA [Tribolium castaneum] gi|270013188|gb|EFA09636.1| hypothetical protein TcasGA2_TC011759 [Tribolium castaneum]

 Score =  259 bits (663), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 131/197 (66%), Positives = 151/197 (76%), Gaps = 28/197 (14%)

Query: 31  SEIENLPPSIQEQLFDELLDKEAQQQLEAEPHPVINWSHELLDKEAQQQLEAEPHPVINW 90
           +E+E LP ++QEQLF+ELLDK+A                       Q QLE+EP  VINW
Sbjct: 330 AEVEELPGTVQEQLFNELLDKDA-----------------------QCQLESEPA-VINW 365

Query: 91  SHEVT----AHLYALWNRSAGDCLLDSLMQATWGVFDRENVLRRALADSLAQASHLFYPR 146
           S E+T    + LYALWNRSAGDCLLDS+MQATWGVFDR+N LRRALA+SL Q+ H+FYPR
Sbjct: 366 SLELTVRLGSRLYALWNRSAGDCLLDSVMQATWGVFDRDNTLRRALAESLTQSGHMFYPR 425

Query: 147 WKEYEDMHASLLHFSLDESQWEEDWASLVSLASQPGAALEQLHVFALAHILRRPIIVYGV 206
           WKEYE   AS L +SLDE+QW+EDW SL+SLASQPG +LEQLHVF LAHILRRPIIVYGV
Sbjct: 426 WKEYEASQASFLQYSLDEAQWDEDWTSLLSLASQPGTSLEQLHVFTLAHILRRPIIVYGV 485

Query: 207 KYVKSFRGEDIGYARFE 223
           KYVKSFRGE +GYARFE
Sbjct: 486 KYVKSFRGEALGYARFE 502

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194902854|ref|XP_001980774.1| GG17341 [Drosophila erecta] gi|190652477|gb|EDV49732.1| GG17341 [Drosophila erecta]

 Score =  259 bits (661), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 128/197 (64%), Positives = 153/197 (77%), Gaps = 28/197 (14%)

Query: 31  SEIENLPPSIQEQLFDELLDKEAQQQLEAEPHPVINWSHELLDKEAQQQLEAEPHPVINW 90
           +EIE LP  IQEQL+DELLD++A                       Q+QLE  P P +NW
Sbjct: 460 AEIEELPIPIQEQLYDELLDRDA-----------------------QKQLETPP-PALNW 495

Query: 91  SHEVTAHL----YALWNRSAGDCLLDSLMQATWGVFDRENVLRRALADSLAQASHLFYPR 146
           S E+TA L    + LWNRSAGDCLLDS MQATWGVFDR+N+LRRALAD+L Q  H+F+ R
Sbjct: 496 SLEITARLSSRMFVLWNRSAGDCLLDSAMQATWGVFDRDNILRRALADTLHQCGHVFFTR 555

Query: 147 WKEYEDMHASLLHFSLDESQWEEDWASLVSLASQPGAALEQLHVFALAHILRRPIIVYGV 206
           WKEYE + AS+LHF+L++SQ+EEDW++L+SLASQPG++LEQLH+FALAHILRRPIIVYGV
Sbjct: 556 WKEYEMLQASMLHFTLEDSQFEEDWSTLLSLASQPGSSLEQLHIFALAHILRRPIIVYGV 615

Query: 207 KYVKSFRGEDIGYARFE 223
           KYVKSFRGEDIGYARFE
Sbjct: 616 KYVKSFRGEDIGYARFE 632

Source: Drosophila erecta

Species: Drosophila erecta

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	223
FB|FBgn0037734	778	trbd "trabid" [Drosophila mela	0.748	0.214	0.687	1e-61
UNIPROTKB|Q6NUB7	701	zranb1-b "Ubiquitin thioestera	0.686	0.218	0.637	3.8e-53
UNIPROTKB|F1NZM8	711	ZRANB1 "Uncharacterized protei	0.686	0.215	0.637	4.9e-53
UNIPROTKB|B1H2Q2	701	zranb1 "Ubiquitin thioesterase	0.686	0.218	0.637	4.9e-53
UNIPROTKB|Q5U595	701	zranb1-a "Ubiquitin thioestera	0.686	0.218	0.637	4.9e-53
UNIPROTKB|A6QP16	708	ZRANB1 "Ubiquitin thioesterase	0.686	0.216	0.631	8e-53
UNIPROTKB|E2RM50	734	ZRANB1 "Uncharacterized protei	0.686	0.208	0.631	8e-53
UNIPROTKB|Q9UGI0	708	ZRANB1 "Ubiquitin thioesterase	0.686	0.216	0.631	8e-53
UNIPROTKB|F1SDN8	708	ZRANB1 "Uncharacterized protei	0.686	0.216	0.631	8e-53
MGI|MGI:106441	708	Zranb1 "zinc finger, RAN-bindi	0.686	0.216	0.631	8e-53

FB|FBgn0037734 trbd "trabid" [Drosophila melanogaster (taxid:7227)]

 Score = 631 (227.2 bits), Expect = 1.0e-61, P = 1.0e-61
 Identities = 119/173 (68%), Positives = 146/173 (84%)

Query:    56 QLEAEPHPVINWSH-ELLDKEAQQQLEAEPHPVINWSHEVTAHL----YALWNRSAGDCL 110
             ++E  P P+    + ELLD++AQ+QLE  P P +NWS E+TA L    + LWNRSAGDCL
Sbjct:   461 EIEELPIPIQEQLYDELLDRDAQKQLETPP-PALNWSLEITARLSSRMFVLWNRSAGDCL 519

Query:   111 LDSLMQATWGVFDRENVLRRALADSLAQASHLFYPRWKEYEDMHASLLHFSLDESQWEED 170
             LDS MQATWGVFDR+N+LRRALAD+L Q  H+F+ RWKEYE + AS+LHF+L++SQ+EED
Sbjct:   520 LDSAMQATWGVFDRDNILRRALADTLHQCGHVFFTRWKEYEMLQASMLHFTLEDSQFEED 579

Query:   171 WASLVSLASQPGAALEQLHVFALAHILRRPIIVYGVKYVKSFRGEDIGYARFE 223
             W++L+SLA QPG++LEQLH+FALAHILRRPIIVYGVKYVKSFRGEDIGYARFE
Sbjct:   580 WSTLLSLAGQPGSSLEQLHIFALAHILRRPIIVYGVKYVKSFRGEDIGYARFE 632

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0030177 "positive regulation of Wnt receptor signaling pathway" evidence=IGI

UNIPROTKB|Q6NUB7 zranb1-b "Ubiquitin thioesterase zranb1-B" [Xenopus laevis (taxid:8355)]

 Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
 Identities = 102/160 (63%), Positives = 129/160 (80%)

Query:    70 ELLDKEAQQQLEAEPHPVINWSHEV----TAHLYALWNRSAGDCLLDSLMQATWGVFDRE 125
             E+LD++ Q++LE E  P+INWS E+     + LYALWNR+AGDCLLDS++QATWG++D++
Sbjct:   394 EVLDRDVQKELEEES-PIINWSLELGTRLDSRLYALWNRTAGDCLLDSVLQATWGIYDKD 452

Query:   126 NVLRRALADSLAQASHLFYPRWKEYEDMHASL--LHFSLDESQWEEDWASLVSLASQPGA 183
             +VLR+AL DSL   SH FY RWKE+E  ++    LHFSL E QW+EDWA ++SLASQPGA
Sbjct:   453 SVLRKALHDSLRDCSHWFYSRWKEWESWYSQSFGLHFSLREEQWQEDWAFILSLASQPGA 512

Query:   184 ALEQLHVFALAHILRRPIIVYGVKYVKSFRGEDIGYARFE 223
             +LEQ H+F LAHILRRPIIVYGVKY KSFRGE +GY RF+
Sbjct:   513 SLEQTHIFVLAHILRRPIIVYGVKYYKSFRGETLGYTRFQ 552

GO:0004221 "ubiquitin thiolesterase activity" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0007010 "cytoskeleton organization" evidence=ISS

GO:0016477 "cell migration" evidence=ISS

GO:0022604 "regulation of cell morphogenesis" evidence=ISS

GO:0030177 "positive regulation of Wnt receptor signaling pathway" evidence=ISS

GO:0070536 "protein K63-linked deubiquitination" evidence=ISS

UNIPROTKB|F1NZM8 ZRANB1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 549 (198.3 bits), Expect = 4.9e-53, P = 4.9e-53
 Identities = 102/160 (63%), Positives = 129/160 (80%)

Query:    70 ELLDKEAQQQLEAEPHPVINWSHEV----TAHLYALWNRSAGDCLLDSLMQATWGVFDRE 125
             E+LD++ Q++LE E  P+INWS E+     + LYALWNR+AGDCLLDS++QATWG++D++
Sbjct:   404 EVLDRDVQKELEEES-PIINWSLELGTRLDSRLYALWNRTAGDCLLDSVLQATWGIYDKD 462

Query:   126 NVLRRALADSLAQASHLFYPRWKEYEDMHASL--LHFSLDESQWEEDWASLVSLASQPGA 183
             +VLR+AL DSL   SH FY RWKE+E  ++    LHFSL E QW+EDWA ++SLASQPGA
Sbjct:   463 SVLRKALHDSLHDCSHWFYTRWKEWESWYSQSFGLHFSLREEQWQEDWAFILSLASQPGA 522

Query:   184 ALEQLHVFALAHILRRPIIVYGVKYVKSFRGEDIGYARFE 223
             +LEQ H+F LAHILRRPIIVYGVKY KSFRGE +GY RF+
Sbjct:   523 SLEQTHIFVLAHILRRPIIVYGVKYYKSFRGETLGYTRFQ 562

GO:0008270 "zinc ion binding" evidence=IEA

GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA

GO:0004843 "ubiquitin-specific protease activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0007010 "cytoskeleton organization" evidence=IEA

GO:0016477 "cell migration" evidence=IEA

GO:0022604 "regulation of cell morphogenesis" evidence=IEA

GO:0030177 "positive regulation of Wnt receptor signaling pathway" evidence=IEA

GO:0070530 "K63-linked polyubiquitin binding" evidence=IEA

GO:0070536 "protein K63-linked deubiquitination" evidence=IEA

GO:0071947 "protein deubiquitination involved in ubiquitin-dependent protein catabolic process" evidence=IEA

UNIPROTKB|B1H2Q2 zranb1 "Ubiquitin thioesterase zranb1" [Xenopus (Silurana) tropicalis (taxid:8364)]

 Score = 549 (198.3 bits), Expect = 4.9e-53, P = 4.9e-53
 Identities = 102/160 (63%), Positives = 129/160 (80%)

Query:    70 ELLDKEAQQQLEAEPHPVINWSHEV----TAHLYALWNRSAGDCLLDSLMQATWGVFDRE 125
             E+LD++ Q++LE E  P+INWS E+     + LYALWNR+AGDCLLDS++QATWG++D++
Sbjct:   394 EVLDRDVQKELEEES-PIINWSLELGTRLDSRLYALWNRTAGDCLLDSVLQATWGIYDKD 452

Query:   126 NVLRRALADSLAQASHLFYPRWKEYEDMHASL--LHFSLDESQWEEDWASLVSLASQPGA 183
             +VLR+AL DSL   SH FY RWKE+E  ++    LHFSL E QW+EDWA ++SLASQPGA
Sbjct:   453 SVLRKALHDSLHDCSHWFYSRWKEWESWYSQSFGLHFSLREEQWQEDWAFILSLASQPGA 512

Query:   184 ALEQLHVFALAHILRRPIIVYGVKYVKSFRGEDIGYARFE 223
             +LEQ H+F LAHILRRPIIVYGVKY KSFRGE +GY RF+
Sbjct:   513 SLEQTHIFVLAHILRRPIIVYGVKYYKSFRGETLGYTRFQ 552

GO:0004221 "ubiquitin thiolesterase activity" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0007010 "cytoskeleton organization" evidence=ISS

GO:0016477 "cell migration" evidence=ISS

GO:0022604 "regulation of cell morphogenesis" evidence=ISS

GO:0030177 "positive regulation of Wnt receptor signaling pathway" evidence=ISS

GO:0070536 "protein K63-linked deubiquitination" evidence=ISS

UNIPROTKB|Q5U595 zranb1-a "Ubiquitin thioesterase zranb1-A" [Xenopus laevis (taxid:8355)]

 Score = 549 (198.3 bits), Expect = 4.9e-53, P = 4.9e-53
 Identities = 102/160 (63%), Positives = 129/160 (80%)

Query:    70 ELLDKEAQQQLEAEPHPVINWSHEV----TAHLYALWNRSAGDCLLDSLMQATWGVFDRE 125
             E+LD++ Q++LE E  P+INWS E+     + LYALWNR+AGDCLLDS++QATWG++D++
Sbjct:   394 EVLDRDVQKELEEES-PIINWSLELGTRLDSRLYALWNRTAGDCLLDSVLQATWGIYDKD 452

Query:   126 NVLRRALADSLAQASHLFYPRWKEYEDMHASL--LHFSLDESQWEEDWASLVSLASQPGA 183
             +VLR+AL DSL   SH FY RWKE+E  ++    LHFSL E QW+EDWA ++SLASQPGA
Sbjct:   453 SVLRKALHDSLHDCSHWFYSRWKEWESWYSQSFGLHFSLREEQWQEDWAFILSLASQPGA 512

Query:   184 ALEQLHVFALAHILRRPIIVYGVKYVKSFRGEDIGYARFE 223
             +LEQ H+F LAHILRRPIIVYGVKY KSFRGE +GY RF+
Sbjct:   513 SLEQTHIFVLAHILRRPIIVYGVKYYKSFRGETLGYTRFQ 552

GO:0004221 "ubiquitin thiolesterase activity" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0007010 "cytoskeleton organization" evidence=ISS

GO:0016477 "cell migration" evidence=ISS

GO:0022604 "regulation of cell morphogenesis" evidence=ISS

GO:0030177 "positive regulation of Wnt receptor signaling pathway" evidence=ISS

GO:0070536 "protein K63-linked deubiquitination" evidence=ISS

UNIPROTKB|A6QP16 ZRANB1 "Ubiquitin thioesterase ZRANB1" [Bos taurus (taxid:9913)]

 Score = 547 (197.6 bits), Expect = 8.0e-53, P = 8.0e-53
 Identities = 101/160 (63%), Positives = 129/160 (80%)

Query:    70 ELLDKEAQQQLEAEPHPVINWSHEVT----AHLYALWNRSAGDCLLDSLMQATWGVFDRE 125
             E+LD++ Q++LE E  P+INWS E+     + LYALWNR+AGDCLLDS++QATWG++D++
Sbjct:   401 EVLDRDVQKELEEES-PIINWSLELATRLDSRLYALWNRTAGDCLLDSVLQATWGIYDKD 459

Query:   126 NVLRRALADSLAQASHLFYPRWKEYEDMHASL--LHFSLDESQWEEDWASLVSLASQPGA 183
             +VLR+AL DSL   SH FY RWK++E  ++    LHFSL E QW+EDWA ++SLASQPGA
Sbjct:   460 SVLRKALHDSLHDCSHWFYTRWKDWESWYSQSFGLHFSLREEQWQEDWAFILSLASQPGA 519

Query:   184 ALEQLHVFALAHILRRPIIVYGVKYVKSFRGEDIGYARFE 223
             +LEQ H+F LAHILRRPIIVYGVKY KSFRGE +GY RF+
Sbjct:   520 SLEQTHIFVLAHILRRPIIVYGVKYYKSFRGETLGYTRFQ 559

GO:0022604 "regulation of cell morphogenesis" evidence=ISS

GO:0016477 "cell migration" evidence=ISS

GO:0007010 "cytoskeleton organization" evidence=ISS

GO:0004221 "ubiquitin thiolesterase activity" evidence=ISS

GO:0070536 "protein K63-linked deubiquitination" evidence=ISS

GO:0030177 "positive regulation of Wnt receptor signaling pathway" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:0071947 "protein deubiquitination involved in ubiquitin-dependent protein catabolic process" evidence=IEA

GO:0070530 "K63-linked polyubiquitin binding" evidence=IEA

GO:0004843 "ubiquitin-specific protease activity" evidence=IEA

GO:0016055 "Wnt receptor signaling pathway" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|E2RM50 ZRANB1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 547 (197.6 bits), Expect = 8.0e-53, P = 8.0e-53
 Identities = 101/160 (63%), Positives = 129/160 (80%)

Query:    70 ELLDKEAQQQLEAEPHPVINWSHEVT----AHLYALWNRSAGDCLLDSLMQATWGVFDRE 125
             E+LD++ Q++LE E  P+INWS E+     + LYALWNR+AGDCLLDS++QATWG++D++
Sbjct:   427 EVLDRDVQKELEEES-PIINWSLELATRLDSRLYALWNRTAGDCLLDSVLQATWGIYDKD 485

Query:   126 NVLRRALADSLAQASHLFYPRWKEYEDMHASL--LHFSLDESQWEEDWASLVSLASQPGA 183
             +VLR+AL DSL   SH FY RWK++E  ++    LHFSL E QW+EDWA ++SLASQPGA
Sbjct:   486 SVLRKALHDSLHDCSHWFYTRWKDWESWYSQSFGLHFSLREEQWQEDWAFILSLASQPGA 545

Query:   184 ALEQLHVFALAHILRRPIIVYGVKYVKSFRGEDIGYARFE 223
             +LEQ H+F LAHILRRPIIVYGVKY KSFRGE +GY RF+
Sbjct:   546 SLEQTHIFVLAHILRRPIIVYGVKYYKSFRGETLGYTRFQ 585

GO:0071947 "protein deubiquitination involved in ubiquitin-dependent protein catabolic process" evidence=IEA

GO:0070536 "protein K63-linked deubiquitination" evidence=IEA

GO:0070530 "K63-linked polyubiquitin binding" evidence=IEA

GO:0030177 "positive regulation of Wnt receptor signaling pathway" evidence=IEA

GO:0022604 "regulation of cell morphogenesis" evidence=IEA

GO:0016477 "cell migration" evidence=IEA

GO:0007010 "cytoskeleton organization" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0004843 "ubiquitin-specific protease activity" evidence=IEA

GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|Q9UGI0 ZRANB1 "Ubiquitin thioesterase ZRANB1" [Homo sapiens (taxid:9606)]

 Score = 547 (197.6 bits), Expect = 8.0e-53, P = 8.0e-53
 Identities = 101/160 (63%), Positives = 129/160 (80%)

Query:    70 ELLDKEAQQQLEAEPHPVINWSHEVT----AHLYALWNRSAGDCLLDSLMQATWGVFDRE 125
             E+LD++ Q++LE E  P+INWS E+     + LYALWNR+AGDCLLDS++QATWG++D++
Sbjct:   401 EVLDRDVQKELEEES-PIINWSLELATRLDSRLYALWNRTAGDCLLDSVLQATWGIYDKD 459

Query:   126 NVLRRALADSLAQASHLFYPRWKEYEDMHASL--LHFSLDESQWEEDWASLVSLASQPGA 183
             +VLR+AL DSL   SH FY RWK++E  ++    LHFSL E QW+EDWA ++SLASQPGA
Sbjct:   460 SVLRKALHDSLHDCSHWFYTRWKDWESWYSQSFGLHFSLREEQWQEDWAFILSLASQPGA 519

Query:   184 ALEQLHVFALAHILRRPIIVYGVKYVKSFRGEDIGYARFE 223
             +LEQ H+F LAHILRRPIIVYGVKY KSFRGE +GY RF+
Sbjct:   520 SLEQTHIFVLAHILRRPIIVYGVKYYKSFRGETLGYTRFQ 559

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016055 "Wnt receptor signaling pathway" evidence=IEA

GO:0030177 "positive regulation of Wnt receptor signaling pathway" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

GO:0004221 "ubiquitin thiolesterase activity" evidence=IMP

GO:0070536 "protein K63-linked deubiquitination" evidence=IMP

GO:0007010 "cytoskeleton organization" evidence=IMP

GO:0016477 "cell migration" evidence=IMP

GO:0022604 "regulation of cell morphogenesis" evidence=IMP

GO:0005737 "cytoplasm" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0004843 "ubiquitin-specific protease activity" evidence=IDA

GO:0070530 "K63-linked polyubiquitin binding" evidence=IDA

GO:0071947 "protein deubiquitination involved in ubiquitin-dependent protein catabolic process" evidence=IMP

UNIPROTKB|F1SDN8 ZRANB1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 547 (197.6 bits), Expect = 8.0e-53, P = 8.0e-53
 Identities = 101/160 (63%), Positives = 129/160 (80%)

Query:    70 ELLDKEAQQQLEAEPHPVINWSHEVT----AHLYALWNRSAGDCLLDSLMQATWGVFDRE 125
             E+LD++ Q++LE E  P+INWS E+     + LYALWNR+AGDCLLDS++QATWG++D++
Sbjct:   401 EVLDRDVQKELEEES-PIINWSLELATRLDSRLYALWNRTAGDCLLDSVLQATWGIYDKD 459

Query:   126 NVLRRALADSLAQASHLFYPRWKEYEDMHASL--LHFSLDESQWEEDWASLVSLASQPGA 183
             +VLR+AL DSL   SH FY RWK++E  ++    LHFSL E QW+EDWA ++SLASQPGA
Sbjct:   460 SVLRKALHDSLHDCSHWFYTRWKDWESWYSQSFGLHFSLREEQWQEDWAFILSLASQPGA 519

Query:   184 ALEQLHVFALAHILRRPIIVYGVKYVKSFRGEDIGYARFE 223
             +LEQ H+F LAHILRRPIIVYGVKY KSFRGE +GY RF+
Sbjct:   520 SLEQTHIFVLAHILRRPIIVYGVKYYKSFRGETLGYTRFQ 559

GO:0071947 "protein deubiquitination involved in ubiquitin-dependent protein catabolic process" evidence=IEA

GO:0070536 "protein K63-linked deubiquitination" evidence=IEA

GO:0070530 "K63-linked polyubiquitin binding" evidence=IEA

GO:0030177 "positive regulation of Wnt receptor signaling pathway" evidence=IEA

GO:0022604 "regulation of cell morphogenesis" evidence=IEA

GO:0016477 "cell migration" evidence=IEA

GO:0007010 "cytoskeleton organization" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0004843 "ubiquitin-specific protease activity" evidence=IEA

GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

MGI|MGI:106441 Zranb1 "zinc finger, RAN-binding domain containing 1" [Mus musculus (taxid:10090)]

 Score = 547 (197.6 bits), Expect = 8.0e-53, P = 8.0e-53
 Identities = 101/160 (63%), Positives = 129/160 (80%)

Query:    70 ELLDKEAQQQLEAEPHPVINWSHEVT----AHLYALWNRSAGDCLLDSLMQATWGVFDRE 125
             E+LD++ Q++LE E  P+INWS E+     + LYALWNR+AGDCLLDS++QATWG++D++
Sbjct:   401 EVLDRDVQKELEEES-PIINWSLELATRLDSRLYALWNRTAGDCLLDSVLQATWGIYDKD 459

Query:   126 NVLRRALADSLAQASHLFYPRWKEYEDMHASL--LHFSLDESQWEEDWASLVSLASQPGA 183
             +VLR+AL DSL   SH FY RWK++E  ++    LHFSL E QW+EDWA ++SLASQPGA
Sbjct:   460 SVLRKALHDSLHDCSHWFYTRWKDWESWYSQSFGLHFSLREEQWQEDWAFILSLASQPGA 519

Query:   184 ALEQLHVFALAHILRRPIIVYGVKYVKSFRGEDIGYARFE 223
             +LEQ H+F LAHILRRPIIVYGVKY KSFRGE +GY RF+
Sbjct:   520 SLEQTHIFVLAHILRRPIIVYGVKYYKSFRGETLGYTRFQ 559

GO:0004221 "ubiquitin thiolesterase activity" evidence=ISO

GO:0004843 "ubiquitin-specific protease activity" evidence=ISO

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISO

GO:0005737 "cytoplasm" evidence=ISO

GO:0006508 "proteolysis" evidence=IEA

GO:0007010 "cytoskeleton organization" evidence=ISO

GO:0008233 "peptidase activity" evidence=IEA

GO:0008234 "cysteine-type peptidase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016055 "Wnt receptor signaling pathway" evidence=IEA

GO:0016477 "cell migration" evidence=ISO

GO:0016787 "hydrolase activity" evidence=IEA

GO:0022604 "regulation of cell morphogenesis" evidence=ISO

GO:0030177 "positive regulation of Wnt receptor signaling pathway" evidence=ISO

GO:0046872 "metal ion binding" evidence=IEA

GO:0070530 "K63-linked polyubiquitin binding" evidence=ISO

GO:0070536 "protein K63-linked deubiquitination" evidence=ISO

GO:0071947 "protein deubiquitination involved in ubiquitin-dependent protein catabolic process" evidence=ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
A0JMQ9	ZRN1B_DANRE	3, ., 4, ., 1, 9, ., 1, 2	0.5373	0.7802	0.2430	yes	N/A
Q9UGI0	ZRAN1_HUMAN	3, ., 4, ., 1, 9, ., 1, 2	0.5327	0.7802	0.2457	yes	N/A
Q7M760	ZRAN1_MOUSE	3, ., 4, ., 1, 9, ., 1, 2	0.5327	0.7802	0.2457	yes	N/A
Q9VH90	TRBID_DROME	3, ., 4, ., 1, 9, ., 1, 2	0.6446	0.7578	0.2172	yes	N/A
A6QP16	ZRAN1_BOVIN	3, ., 4, ., 1, 9, ., 1, 2	0.5327	0.7802	0.2457	yes	N/A
B1H2Q2	ZRAN1_XENTR	3, ., 4, ., 1, 9, ., 1, 2	0.5373	0.7802	0.2482	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.4.19	LOW CONFIDENCE prediction!
3rd Layer	3.4.19.12	LOW CONFIDENCE prediction!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	223
pfam02338	123	pfam02338, OTU, OTU-like cysteine protease	2e-10

>gnl|CDD|216981 pfam02338, OTU, OTU-like cysteine protease

 Score = 56.4 bits (136), Expect = 2e-10
 Identities = 31/121 (25%), Positives = 43/121 (35%), Gaps = 27/121 (22%)

Query: 104 RSAGDCLLDSLMQATWGVFDRENV--LRRALADSLAQASHLFYPRWKEYEDMHASLLHFS 161
              G+CL  ++         +E    LR A+ + L +                    +  
Sbjct: 1   PGDGNCLFHAVSDQLGDAGRQELHDELREAVVEYLRE--------------------NRE 40

Query: 162 LDESQWEEDWASLVSLASQPGAALEQLHVFALAHILRRPIIVYGVKYVKSFRGEDIGYAR 221
             E   EED        S+ GA    + +FALAHILR PIIVY     K   G    Y +
Sbjct: 41  DFEKFLEEDENEYYKWISKDGAWGGNIEIFALAHILRVPIIVY-----KLQGGRITVYIK 95

Query: 222 F 222
            
Sbjct: 96  I 96

This family is comprised of a group of predicted cysteine proteases, homologous to the Ovarian Tumour (OTU) gene in Drosophila. Members include proteins from eukaryotes, viruses and pathogenic bacterium. The conserved cysteine and histidine, and possibly the aspartate, represent the catalytic residues in this putative group of proteases. Length = 123

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	223
KOG4345|consensus	774		99.93
KOG4345|consensus	774		99.93
PF02338	121	OTU: OTU-like cysteine protease; InterPro: IPR0033	99.5
KOG2606|consensus	302		97.57
PF10275	244	Peptidase_C65: Peptidase C65 Otubain; InterPro: IP	88.8

>KOG4345|consensus

Probab=99.93  E-value=1.1e-26  Score=228.17  Aligned_cols=178  Identities=34%  Similarity=0.361  Sum_probs=165.6

Q ss_pred             ccceEEEeccccccCCHHHHHHHHHhhcCHHHHHHHhcCCCCCCcchhhhhhHHHHhhhhcCCCCcccccccccc----e
Q psy5991          22 TSKYFVCFFSEIENLPPSIQEQLFDELLDKEAQQQLEAEPHPVINWSHELLDKEAQQQLEAEPHPVINWSHEVTA----H   97 (223)
Q Consensus        22 ~~~~t~~lP~~i~~~p~~~re~l~~~LlD~~~q~~LE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LNW~~~~~~----r   97 (223)
                      +.+-||.+++++...|+.++++++++.+|+++|+.||+..                        +.+||..+...    +
T Consensus       419 qk~~t~a~s~~~~eg~~~~~lg~~~~~~~~~l~~~~e~~~------------------------g~~nsal~~a~~~~sr  474 (774)
T KOG4345|consen  419 QKDKTRADSVANKEGSPGKTLGLKLKKNMGGLQKNLEEKP------------------------GGPNSALGTAPRLFSR  474 (774)
T ss_pred             hhccccccccccccCCcchhhhhhhhhhhhhhhhCcCCCC------------------------CCCCCCCCCCCCHHHH
Confidence            5678999999999999999999999999999999999976                        67888887643    7


Q ss_pred             eeeeeeCCCCcchhHHhhhhhhccccCchHHH-HHHHHHHHhhh--hhHHHHHHHHH--HHhhcccccccChhHHHHHHH
Q psy5991          98 LYALWNRSAGDCLLDSLMQATWGVFDRENVLR-RALADSLAQAS--HLFYPRWKEYE--DMHASLLHFSLDESQWEEDWA  172 (223)
Q Consensus        98 L~pL~t~GDGNCLlHA~S~~mWGv~Drdl~LR-kaL~~~L~~~~--~~f~rRW~~~e--~~~s~~~~~~~~e~eW~~EW~  172 (223)
                      ++.+|++..|.|++++..|+.|||.|+++.+| +++++.+.++.  +.|+.||+.++  ..++..+++++...||++||.
T Consensus       475 ~~~~~nk~r~~c~~~s~~qat~~v~~k~n~~~~~~~~~~~~~~~~~~~~~tr~k~~~~~~~~s~gl~~~~~~hQ~~Ee~~  554 (774)
T KOG4345|consen  475 SKTKKNKSRSGCLLDSNAQATGGVSEKDNALRKRALADKYSTCVFNSLFITRWKMQGEEKSISLGLLLTLHRHQFQEEMI  554 (774)
T ss_pred             HHHHHhhhccCCccchhccccCCcccCCccccccccchhhhhhhhhhhhhhhHhhhhhhHHHhhhcccCchHhhhhHHHH
Confidence            88899999999999999999999999999999 99999999886  88999999876  444556899999999999999


Q ss_pred             HHHHhhCCCcchhhHHHHHHHhhhhcCceEEecccccc--ccCCCcccccCCC
Q psy5991         173 SLVSLASQPGAALEQLHVFALAHILRRPIIVYGVKYVK--SFRGEDIGYARFE  223 (223)
Q Consensus       173 ~iv~~As~pg~sLEeiHIFvLAnILRRPIIVy~~~~lr--~~rGe~l~~~rf~  223 (223)
                      ..+..+++|+.++||-|+|+||||++|||||++.++.+  +++||+.|+++||
T Consensus       555 ~rll~saqp~~s~EQ~q~~~~a~ia~rai~~ggv~g~k~p~krgE~~g~~k~q  607 (774)
T KOG4345|consen  555 QRLLLSAQPRFSAEQKQIFPLAHIARRAIIVGGVKGGKPPSKRGETDGYNKEQ  607 (774)
T ss_pred             HHHhcCCCcchhhhhhcchhhhhhhhcccccccccCCCCCccCCCcccccccC
Confidence            99999999999999999999999999999999999999  9999999999986

>KOG4345|consensus

Probab=99.93  E-value=4.1e-27  Score=231.14  Aligned_cols=160  Identities=24%  Similarity=0.332  Sum_probs=140.8

Q ss_pred             CHHHHHHHHHhhcCHHHHHHHhcCCCCCCcchhhhhhHHHHhhhhcCCCCcccccccccceeeeeeeCCCCcchhHHhhh
Q psy5991          37 PPSIQEQLFDELLDKEAQQQLEAEPHPVINWSHELLDKEAQQQLEAEPHPVINWSHEVTAHLYALWNRSAGDCLLDSLMQ  116 (223)
Q Consensus        37 p~~~re~l~~~LlD~~~q~~LE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LNW~~~~~~rL~pL~t~GDGNCLlHA~S~  116 (223)
                      +..+|++..+.++|+.++-.++.+.                         +|||++++. .+..|.++||++|+.|+++|
T Consensus        74 s~~~r~~~~~s~~~~~~k~~~~~~~-------------------------~lnw~re~R-~~~~ls~~gd~~~~~~q~pq  127 (774)
T KOG4345|consen   74 SGQPREIIHKSLIDRNIKWPRPSLQ-------------------------RLNWPREKR-LSRGLSHAGDMPILAFQLPQ  127 (774)
T ss_pred             cCCcccccccccccccccCCchHhh-------------------------hhhHHHHHH-HHHHhhccCCCccchhccch
Confidence            4588999999999999999999998                         999999984 78899999999999999999


Q ss_pred             hhhccccCchHHHHHHHHHHHhhh-hhHHHH-HHHHHH-Hhhc-ccccccChhHHHHHHHHHHHhhCC------------
Q psy5991         117 ATWGVFDRENVLRRALADSLAQAS-HLFYPR-WKEYED-MHAS-LLHFSLDESQWEEDWASLVSLASQ------------  180 (223)
Q Consensus       117 ~mWGv~Drdl~LRkaL~~~L~~~~-~~f~rR-W~~~e~-~~s~-~~~~~~~e~eW~~EW~~iv~~As~------------  180 (223)
                      +||+++|+...|++++..+|...+ +.+.-+ |..+.. .+.+ .+++.+..+.|++||+.++++||.            
T Consensus       128 ~s~~~qs~~VaL~~~l~~~l~~~dt~~~N~l~w~~h~lvlqk~l~t~l~~~~~rw~~eW~~lik~ass~pr~~r~~~~~~  207 (774)
T KOG4345|consen  128 LSVYEQSTPVALEKALFRLLPLADTGDGNCLMWGFHDLVLQKALYTGLCYGTERWNDEWTELIKLASSEPRMHRSGNGGT  207 (774)
T ss_pred             hhccccccchhhhhhhhhcccccccCCccchhhhhhhHHHHHHHHHhhchhhHHHHHHHHHHHHhhcccchhhhcccCCC
Confidence            999999999999999999998654 456555 764322 1222 377888999999999999999996            


Q ss_pred             ---------CcchhhHHHHHHHhhhhcCceEEeccccccccCCCcccccCC
Q psy5991         181 ---------PGAALEQLHVFALAHILRRPIIVYGVKYVKSFRGEDIGYARF  222 (223)
Q Consensus       181 ---------pg~sLEeiHIFvLAnILRRPIIVy~~~~lr~~rGe~l~~~rf  222 (223)
                               ||++||+||||||||||||||||++|+++||..|++++++.|
T Consensus       208 ~~~~e~s~~~yesLEe~hifvl~~ilRrpivvvsd~mlR~s~~~sfap~~~  258 (774)
T KOG4345|consen  208 GGGVEISEDPYESLEEFHIFVLAHILRRPIVVVSDTMLRDSGGESFAPIPV  258 (774)
T ss_pred             CCCcccccccchhHHHHHHHHHHHHhhCCeeEecccccccCCCcccccCcc
Confidence                     258999999999999999999999999999999999999877

>PF02338 OTU: OTU-like cysteine protease; InterPro: IPR003323 This is a group of proteins found primarily in viruses, eukaryotes and in the pathogenic bacterium Chlamydia pneumoniae

Probab=99.50  E-value=5.4e-14  Score=107.70  Aligned_cols=77  Identities=31%  Similarity=0.495  Sum_probs=61.5

Q ss_pred             CCCCcchhHHhhhhhh----ccccCchHHHHHHHHHHH-hhhhhHHHHHHHHHHHhhcccccccChhHHHHHHHHHHHhh
Q psy5991         104 RSAGDCLLDSLMQATW----GVFDRENVLRRALADSLA-QASHLFYPRWKEYEDMHASLLHFSLDESQWEEDWASLVSLA  178 (223)
Q Consensus       104 ~GDGNCLlHA~S~~mW----Gv~Drdl~LRkaL~~~L~-~~~~~f~rRW~~~e~~~s~~~~~~~~e~eW~~EW~~iv~~A  178 (223)
                      +||||||+||+|.+|+    |..|....||+.+.+.|+ .....|..-....                          ..
T Consensus         1 pgDGnClF~Avs~~l~~~~~~~~~~~~~lR~~~~~~l~~~~~~~~~~~~~~~--------------------------~~   54 (121)
T PF02338_consen    1 PGDGNCLFRAVSDQLYGDGGGSEDNHQELRKAVVDYLRDKNRDKFEEFLEGD--------------------------KM   54 (121)
T ss_dssp             -SSTTHHHHHHHHHHCTT-SSSTTTHHHHHHHHHHHHHTHTTTHHHHHHHHH--------------------------HH
T ss_pred             CCCccHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhccchhhhhhhhh--------------------------hh
Confidence            5999999999999999    999999999999999998 5544444444311                          23


Q ss_pred             CCCcchhhHHHHHHHhhhhcCceEEecc
Q psy5991         179 SQPGAALEQLHVFALAHILRRPIIVYGV  206 (223)
Q Consensus       179 s~pg~sLEeiHIFvLAnILRRPIIVy~~  206 (223)
                      +.+|.-..+++|++||++++|||+||..
T Consensus        55 ~~~~~Wg~~~el~a~a~~~~~~I~v~~~   82 (121)
T PF02338_consen   55 SKPGTWGGEIELQALANVLNRPIIVYSS   82 (121)
T ss_dssp             TSTTSHEEHHHHHHHHHHHTSEEEEECE
T ss_pred             ccccccCcHHHHHHHHHHhCCeEEEEEc
Confidence            4455555689999999999999999865

In viruses they are annotated as replicase or RNA-dependent RNA polymerase. The eukaryotic sequences are related to the Ovarian Tumour (OTU) gene in Drosophila, cezanne deubiquitinating peptidase and tumor necrosis factor, alpha-induced protein 3 (MEROPS peptidase family C64) and otubain 1 and otubain 2 (MEROPS peptidase family C65). None of these proteins has a known biochemical function but low sequence similarity with the polyprotein regions of arteriviruses, and conserved cysteine and histidine, and possibly the aspartate, residues suggests that those not yet recognised as peptidases could possess cysteine protease activity [].; PDB: 2VFJ_C 3DKB_F 3PHW_A 3PHU_B 3PHX_A 3BY4_A 3C0R_C 3PRM_C 3PRP_C 3ZRH_A ....

>KOG2606|consensus

Probab=97.57  E-value=0.00037  Score=64.55  Aligned_cols=100  Identities=22%  Similarity=0.244  Sum_probs=68.0

Q ss_pred             eeeeeeeCCCCcchhHHhhhhhhccccC---chHHHHHHHHHHHhhhhhHHHHHHHHHHHhhcccccccChhHHHHHHHH
Q psy5991          97 HLYALWNRSAGDCLLDSLMQATWGVFDR---ENVLRRALADSLAQASHLFYPRWKEYEDMHASLLHFSLDESQWEEDWAS  173 (223)
Q Consensus        97 rL~pL~t~GDGNCLlHA~S~~mWGv~Dr---dl~LRkaL~~~L~~~~~~f~rRW~~~e~~~s~~~~~~~~e~eW~~EW~~  173 (223)
                      .|.......|||||+-|++.++==-++.   -..||+...+-|++....|..-..      ....+.++++++.+.-=.+
T Consensus       158 ~l~~~~Ip~DG~ClY~aI~hQL~~~~~~~~~v~kLR~~~a~Ymr~H~~df~pf~~------~eet~d~~~~~~f~~Yc~e  231 (302)
T KOG2606|consen  158 GLKMFDIPADGHCLYAAISHQLKLRSGKLLSVQKLREETADYMREHVEDFLPFLL------DEETGDSLGPEDFDKYCRE  231 (302)
T ss_pred             cCccccCCCCchhhHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHHHHHhhhHhc------CccccccCCHHHHHHHHHH
Confidence            6888899999999999999887433332   356888888888876555554433      2234555564444444334


Q ss_pred             HHHhhCCCcchhhHHHHHHHhhhhcCceEEecc
Q psy5991         174 LVSLASQPGAALEQLHVFALAHILRRPIIVYGV  206 (223)
Q Consensus       174 iv~~As~pg~sLEeiHIFvLAnILRRPIIVy~~  206 (223)
                      |..- +..|+   +|-+|+|+|||+-||-||.-
T Consensus       232 I~~t-~~WGg---elEL~AlShvL~~PI~Vy~~  260 (302)
T KOG2606|consen  232 IRNT-AAWGG---ELELKALSHVLQVPIEVYQA  260 (302)
T ss_pred             hhhh-ccccc---hHHHHHHHHhhccCeEEeec
Confidence            4442 44554   57799999999999999974

>PF10275 Peptidase_C65: Peptidase C65 Otubain; InterPro: IPR019400 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=88.80  E-value=2.1  Score=37.45  Aligned_cols=26  Identities=31%  Similarity=0.379  Sum_probs=18.0

Q ss_pred             CCcchhhHHHHHHHhhhhcCceEEec
Q psy5991         180 QPGAALEQLHVFALAHILRRPIIVYG  205 (223)
Q Consensus       180 ~pg~sLEeiHIFvLAnILRRPIIVy~  205 (223)
                      |++.--.+++|-+||+.|+=||.|+-
T Consensus       179 p~~~Ead~v~i~ALa~aL~v~i~v~y  204 (244)
T PF10275_consen  179 PMGKEADHVQIIALAQALGVPIRVEY  204 (244)
T ss_dssp             STT--B-HHHHHHHHHHHT--EEEEE
T ss_pred             cccccchhHHHHHHHHHhCCeEEEEE
Confidence            44444479999999999999999985

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This family of proteins is a highly specific ubiquitin iso-peptidase that removes ubiquitin from proteins. The modification of cellular proteins by ubiquitin (Ub) is an important event that underlies protein stability and function in eukaryotes, as it is a dynamic and reversible process. Otubain carries several key conserved domains: (i) the OTU (ovarian tumour domain) in which there is an active cysteine protease triad (ii) a nuclear localisation signal, (iii) a Ub interaction motif (UIM)-like motif phi-xx-A-xxxs-xx-Ac (where phi indicates an aromatic amino acid, x indicates any amino acid and Ac indicates an acidic amino acid), (iv) a Ub-associated (UBA)-like domain and (v) the LxxLL motif. ; PDB: 4DDG_C 3VON_O 2ZFY_A 4DHZ_A 4DDI_C 1TFF_A 4DHJ_I 4DHI_B.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	223
3zrh_A	454	Crystal Structure Of The Lys29, Lys33-Linkage-Speci		2e-60
2vfj_A	366	Structure Of The A20 Ovarian Tumour (Otu) Domain Le		9e-16
3dkb_A	390	Crystal Structure Of A20, 2.5 Angstrom Length = 390		1e-15

>pdb|3ZRH|A Chain A, Crystal Structure Of The Lys29, Lys33-Linkage-Specific Trabid Otu Deubiquitinase Domain Reveals An Ankyrin-Repeat Ubiquitin Binding Domain (Ankubd) Length = 454

Iteration: 1
 Score =  228 bits (581), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 114/214 (53%), Positives = 149/214 (69%), Gaps = 40/214 (18%)
Query: 26  FVCFF----------SEIENLPPSIQEQLFDELLDKEAQQQLEAEPHPVINWSHELLDKE 75
           F C+F          ++IE+LPP++QE+LFDE+LD++ Q++LE E               
Sbjct: 127 FACYFLTDLVTFTLPADIEDLPPTVQEKLFDEVLDRDVQKELEEES-------------- 172
Query: 76  AQQQLEAEPHPVINWSHEVT----AHLYALWNRSAGDCLLDSLMQATWGVFDRENVLRRA 131
                     P+INWS E+     + LYALWNR+AGDCLLDS++QATWG++D+++VLR+A
Sbjct: 173 ----------PIINWSLELATRLDSRLYALWNRTAGDCLLDSVLQATWGIYDKDSVLRKA 222
Query: 132 LADSLAQASHLFYPRWKEYEDMHASL--LHFSLDESQWEEDWASLVSLASQPGAALEQLH 189
           L DSL   SH FY RWK++E  ++    LHFSL E QW+EDWA ++SLASQPGA+LEQ H
Sbjct: 223 LHDSLHDCSHWFYTRWKDWESWYSQSFGLHFSLREEQWQEDWAFILSLASQPGASLEQTH 282
Query: 190 VFALAHILRRPIIVYGVKYVKSFRGEDIGYARFE 223
           +F LAHILRRPIIVYGVKY KSFRGE +GY RF+
Sbjct: 283 IFVLAHILRRPIIVYGVKYYKSFRGETLGYTRFQ 316

>pdb|2VFJ|A Chain A, Structure Of The A20 Ovarian Tumour (Otu) Domain Length = 366

Iteration: 1
 Score = 80.1 bits (196), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 82/157 (52%), Gaps = 21/157 (13%)
Query: 71  LLDKEAQQQLEAEPHPVINWSHEVTAHLYALWNRSAGDCLLDSLMQATWGVFDRENVLRR 130
           L+D+  Q  LE++    +NW  EV   L AL     G+CL+ +  Q  WGV D + VLR+
Sbjct: 68  LIDRNIQATLESQKK--LNWCREVRK-LVALKTNGDGNCLMHATSQYMWGVQDTDLVLRK 124
Query: 131 ALADSLAQA-SHLFYPRW-----KEYEDMHASLLHFSLDESQWEEDWASLVSLASQ--PG 182
           AL  +L +  +  F  RW     K  E +   L +   D   W ++W +L+ +AS   P 
Sbjct: 125 ALFSTLKETDTRNFKFRWQLESLKSQEFVETGLCY---DTRNWNDEWDNLIKMASTDTPM 181
Query: 183 A-------ALEQLHVFALAHILRRPIIVYGVKYVKSF 212
           A       +LE++H+F L +ILRRPIIV   K ++S 
Sbjct: 182 ARSGLQYNSLEEIHIFVLCNILRRPIIVISDKMLRSL 218

>pdb|3DKB|A Chain A, Crystal Structure Of A20, 2.5 Angstrom Length = 390

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 82/157 (52%), Gaps = 21/157 (13%)
Query: 71  LLDKEAQQQLEAEPHPVINWSHEVTAHLYALWNRSAGDCLLDSLMQATWGVFDRENVLRR 130
           L+D+  Q  LE++    +NW  EV   L AL     G+CL+ +  Q  WGV D + VLR+
Sbjct: 88  LIDRNIQATLESQKK--LNWCREVRK-LVALKTNGDGNCLMHATSQYMWGVQDTDLVLRK 144
Query: 131 ALADSLAQA-SHLFYPRW-----KEYEDMHASLLHFSLDESQWEEDWASLVSLASQ--PG 182
           AL  +L +  +  F  RW     K  E +   L +   D   W ++W +L+ +AS   P 
Sbjct: 145 ALFSTLKETDTRNFKFRWQLESLKSQEFVETGLCY---DTRNWNDEWDNLIKMASTDTPM 201
Query: 183 A-------ALEQLHVFALAHILRRPIIVYGVKYVKSF 212
           A       +LE++H+F L +ILRRPIIV   K ++S 
Sbjct: 202 ARSGLQYNSLEEIHIFVLCNILRRPIIVISDKMLRSL 238

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	223
3zrh_A	454	Ubiquitin thioesterase zranb1; hydrolase, deubiqui	3e-59
3dkb_A	390	Tumor necrosis factor, alpha-induced protein 3; OT	7e-47
3phu_A	219	RNA-directed RNA polymerase L; OTU domain, DE-ubiq	8e-04

>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens} Length = 454

 Score =  192 bits (488), Expect = 3e-59
 Identities = 115/223 (51%), Positives = 152/223 (68%), Gaps = 22/223 (9%)

Query: 3   EEWLNHYRRLQTKTSISRLTSKYFVCFFSEIENLPPSIQEQLFDELLDKEAQQQLEAEPH 62
            E      + +   +   LT        ++IE+LPP++QE+LFDE+LD++ Q++LE E  
Sbjct: 114 REIAASLHQRKGDFACYFLTDLVTFTLPADIEDLPPTVQEKLFDEVLDRDVQKELEEES- 172

Query: 63  PVINWSHELLDKEAQQQLEAEPHPVINWSHEVTAHLYALWNRSAGDCLLDSLMQATWGVF 122
           P+INWS EL  +   +                   LYALWNR+AGDCLLDS++QATWG++
Sbjct: 173 PIINWSLELATRLDSR-------------------LYALWNRTAGDCLLDSVLQATWGIY 213

Query: 123 DRENVLRRALADSLAQASHLFYPRWKEYEDMH--ASLLHFSLDESQWEEDWASLVSLASQ 180
           D+++VLR+AL DSL   SH FY RWK++E  +  +  LHFSL E QW+EDWA ++SLASQ
Sbjct: 214 DKDSVLRKALHDSLHDCSHWFYTRWKDWESWYSQSFGLHFSLREEQWQEDWAFILSLASQ 273

Query: 181 PGAALEQLHVFALAHILRRPIIVYGVKYVKSFRGEDIGYARFE 223
           PGA+LEQ H+F LAHILRRPIIVYGVKY KSFRGE +GY RF+
Sbjct: 274 PGASLEQTHIFVLAHILRRPIIVYGVKYYKSFRGETLGYTRFQ 316

>3dkb_A Tumor necrosis factor, alpha-induced protein 3; OTU domain, DUB domain, apoptosis, cytoplasm, DNA-binding, hydrolase, metal-binding, nucleus; 2.50A {Homo sapiens} PDB: 2vfj_A Length = 390

 Score =  158 bits (400), Expect = 7e-47
 Identities = 58/235 (24%), Positives = 93/235 (39%), Gaps = 48/235 (20%)

Query: 11  RLQTKTSISRLTSKYFVCFFS---------EIENLPPSIQEQLFDELLDKEAQQQLEAEP 61
           R +T   I + T+     F +               P  +E +   L+D+  Q  LE++ 
Sbjct: 42  RERTPEDIFKPTNGIIHHFKTMHRYTLEMFRTCQFCPQFREIIHKALIDRNIQATLESQK 101

Query: 62  HPVINWSHELLDKEAQQQLEAEPHPVINWSHEVTAHLYALWNRSAGDCLLDSLMQATWGV 121
                                     +NW  EV   L AL     G+CL+ +  Q  WGV
Sbjct: 102 -------------------------KLNWCREVRK-LVALKTNGDGNCLMHATSQYMWGV 135

Query: 122 FDRENVLRRALADSLAQ-ASHLFYPRWKEYEDMHASLL--HFSLDESQWEEDWASLVSLA 178
            D + VLR+AL  +L +  +  F  RW+         +      D   W ++W +L+ +A
Sbjct: 136 QDTDLVLRKALFSTLKETDTRNFKFRWQLESLKSQEFVETGLCYDTRNWNDEWDNLIKMA 195

Query: 179 SQPG---------AALEQLHVFALAHILRRPIIVYGVKYVKSFR-GEDIGYARFE 223
           S             +LE++H+F L +ILRRPIIV   K ++S   G +    +  
Sbjct: 196 STDTPMARSGLQYNSLEEIHIFVLCNILRRPIIVISDKMLRSLESGSNFAPLKVG 250

>3phu_A RNA-directed RNA polymerase L; OTU domain, DE-ubiquitinase, DE-isgylase, hydrolase; 2.20A {Crimean-congo hemorrhagic fever VIRUSIBAR10200} Length = 219

 Score = 38.2 bits (88), Expect = 8e-04
 Identities = 8/77 (10%), Positives = 20/77 (25%), Gaps = 2/77 (2%)

Query: 130 RALADSLA--QASHLFYPRWKEYEDMHASLLHFSLDESQWEEDWASLVSLASQPGAALEQ 187
            ++A+     +  H ++   +  E           +           +            
Sbjct: 45  HSIAELTMPNKTDHSYHYIKRLTESAARKYYQEEPEARLVGLSLEDYLKRMLSDNEWGST 104

Query: 188 LHVFALAHILRRPIIVY 204
           L    LA  +   II++
Sbjct: 105 LEASMLAKEMGITIIIW 121

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	223
3zrh_A	454	Ubiquitin thioesterase zranb1; hydrolase, deubiqui	100.0
3dkb_A	390	Tumor necrosis factor, alpha-induced protein 3; OT	100.0
3pfy_A	185	OTU domain-containing protein 5; structural genomi	98.85
3by4_A	212	OTU1, ubiquitin thioesterase OTU1; ubiquitin hydro	98.75
3phx_A	185	RNA-directed RNA polymerase L; OTU domain, DE-ubiq	98.65
3phu_A	219	RNA-directed RNA polymerase L; OTU domain, DE-ubiq	98.56
1tff_A	234	Ubiquitin thiolesterase protein OTUB2; hydrolase;	96.21
2zfy_A	234	Ubiquitin thioesterase OTUB1; otubain, structural	93.39
4dhi_B	284	Ubiquitin thioesterase otubain-like; ubiquitin E2	89.36
4ddg_A	399	Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI	89.11

>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}

Probab=100.00  E-value=6.2e-71  Score=516.03  Aligned_cols=179  Identities=63%  Similarity=1.152  Sum_probs=166.8

Q ss_pred             eccceEEEeccccccCCHHHHHHHHHhhcCHHHHHHHhcCCCCCCcchhhhhhHHHHhhhhcCCCCccccccccc----c
Q psy5991          21 LTSKYFVCFFSEIENLPPSIQEQLFDELLDKEAQQQLEAEPHPVINWSHELLDKEAQQQLEAEPHPVINWSHEVT----A   96 (223)
Q Consensus        21 ~~~~~t~~lP~~i~~~p~~~re~l~~~LlD~~~q~~LE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LNW~~~~~----~   96 (223)
                      .|+.+||+||++|++||++||++|+++|||+++|++||+++                        ++||||++++    .
T Consensus       132 ~~~~~tF~LP~~I~~~p~~fqe~l~~~LiDr~~q~~LE~~~------------------------~~LNW~~e~~~~~~~  187 (454)
T 3zrh_A          132 LTDLVTFTLPADIEDLPPTVQEKLFDEVLDRDVQKELEEES------------------------PIINWSLELATRLDS  187 (454)
T ss_dssp             ESCCCCCCBCGGGGGSCHHHHHHHHHHHBCHHHHHHHHTTS------------------------SSSSCCHHHHTTTCC
T ss_pred             ecCCeeEECcHHhhhCCHHHHHHHHHHHhhHHHHHHHhhcc------------------------ccccchhhhcccccc
Confidence            48899999999999999999999999999999999999986                        4899999883    5


Q ss_pred             eeeeeeeCCCCcchhHHhhhhhhccccCchHHHHHHHHHHHhhhhhHHHHHHHHHHHhhcc--cccccChhHHHHHHHHH
Q psy5991          97 HLYALWNRSAGDCLLDSLMQATWGVFDRENVLRRALADSLAQASHLFYPRWKEYEDMHASL--LHFSLDESQWEEDWASL  174 (223)
Q Consensus        97 rL~pL~t~GDGNCLlHA~S~~mWGv~Drdl~LRkaL~~~L~~~~~~f~rRW~~~e~~~s~~--~~~~~~e~eW~~EW~~i  174 (223)
                      |||||+|+||||||+||||||||||||++++|||+|+++|+++++.||+||+++|+.+++.  ++|+|+++||++||++|
T Consensus       188 rL~pL~t~GDGNCLLHAvSqamWGV~DrdlvLRkaL~~~L~~~~~~f~~RW~~~e~~q~q~~gL~y~lde~ewq~EW~~i  267 (454)
T 3zrh_A          188 RLYALWNRTAGDCLLDSVLQATWGIYDKDSVLRKALHDSLHDCSHWFYTRWKDWESWYSQSFGLHFSLREEQWQEDWAFI  267 (454)
T ss_dssp             CEEEBCCCCSSCHHHHHHHHTTTSSCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHHHHH
T ss_pred             ceeEeeecCCCccHHHHHHHHhhcccCCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999889999999999999886  78888999999999999


Q ss_pred             HHhhCCCcchhhHHHHHHHhhhhcCceEEeccccccccCCCcccccCCC
Q psy5991         175 VSLASQPGAALEQLHVFALAHILRRPIIVYGVKYVKSFRGEDIGYARFE  223 (223)
Q Consensus       175 v~~As~pg~sLEeiHIFvLAnILRRPIIVy~~~~lr~~rGe~l~~~rf~  223 (223)
                      |++||+||+|||||||||||||||||||||+++|+|||+||+|||++|+
T Consensus       268 v~~As~Pg~sLEeiHIFvLAhVLRRPIIV~~d~~lrs~~Ge~l~pi~f~  316 (454)
T 3zrh_A          268 LSLASQPGASLEQTHIFVLAHILRRPIIVYGVKYYKSFRGETLGYTRFQ  316 (454)
T ss_dssp             HHHTTSTTCCCCHHHHHHHHHHTTSCEEEEECSSCC-----CCCCCCCC
T ss_pred             HHHhcCCcchHHHHHHHHHHHHhcCCeEEeccccccccCCCcCCCcccc
Confidence            9999999999999999999999999999999999999999999999995

>3dkb_A Tumor necrosis factor, alpha-induced protein 3; OTU domain, DUB domain, apoptosis, cytoplasm, DNA-binding, hydrolase, metal-binding, nucleus; 2.50A {Homo sapiens} PDB: 2vfj_A

Probab=100.00  E-value=2.9e-68  Score=491.40  Aligned_cols=174  Identities=32%  Similarity=0.630  Sum_probs=156.3

Q ss_pred             ccceEEEeccccccCCHHHHHHHHHhhcCHHHHHHHhcCCCCCCcchhhhhhHHHHhhhhcCCCCcccccccccceeeee
Q psy5991          22 TSKYFVCFFSEIENLPPSIQEQLFDELLDKEAQQQLEAEPHPVINWSHELLDKEAQQQLEAEPHPVINWSHEVTAHLYAL  101 (223)
Q Consensus        22 ~~~~t~~lP~~i~~~p~~~re~l~~~LlD~~~q~~LE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LNW~~~~~~rL~pL  101 (223)
                      ++.|||+|| +|+.||++||++|+++|||+++|++||+++                         +||||+++ .||+||
T Consensus        63 m~~ytl~lp-~i~~fp~~fre~L~~~LiD~~~q~tLE~~~-------------------------~LNW~~e~-~rL~pL  115 (390)
T 3dkb_A           63 MHRYTLEMF-RTCQFCPQFREIIHKALIDRNIQATLESQK-------------------------KLNWCREV-RKLVAL  115 (390)
T ss_dssp             GGGCCCCBC-CCTTSCHHHHHHHHHHHBCHHHHHHHHHTT-------------------------SSSCCSSB-CCEEEB
T ss_pred             ccceeEecc-ccccCCHHHHHHHHHHHhhHHHHHHHhhcc-------------------------cccccccc-cceEEE
Confidence            799999999 999999999999999999999999999998                         89999997 599999


Q ss_pred             eeCCCCcchhHHhhhhhhccccCchHHHHHHHHHHHhhh-hhHHHHHHHHHHHhhc---ccccccChhHHHHHHHHHHHh
Q psy5991         102 WNRSAGDCLLDSLMQATWGVFDRENVLRRALADSLAQAS-HLFYPRWKEYEDMHAS---LLHFSLDESQWEEDWASLVSL  177 (223)
Q Consensus       102 ~t~GDGNCLlHA~S~~mWGv~Drdl~LRkaL~~~L~~~~-~~f~rRW~~~e~~~s~---~~~~~~~e~eW~~EW~~iv~~  177 (223)
                      +|+||||||+|||||||||||||+++|||+|+++|+++. +.||+||+ .+..+++   .+++.|+++||++||++||++
T Consensus       116 ~t~GDGnCLLHAvSqamWGv~DrdlvLRkaL~~~L~~~~~~~fr~RW~-~e~~~~q~~~~~gL~y~e~ew~~EW~~Iv~~  194 (390)
T 3dkb_A          116 KTNGDGNCLMHATSQYMWGVQDTDLVLRKALFSTLKETDTRNFKFRWQ-LESLKSQEFVETGLCYDTRNWNDEWDNLIKM  194 (390)
T ss_dssp             CCCCSSCHHHHHHHHHHHSSCSTTCHHHHHHHHHHHHSCCHHHHHHHH-HHHHCCCSSCC----CCSSCSSHHHHHHHHH
T ss_pred             EecCCCchHHHHHhHHhcCCCCHhHHHHHHHHHHHHhchHHHHHHHHH-HHHHHhhhhHhhcccccHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999886 68999999 4555554   378999999999999999999


Q ss_pred             hCCC---------cchhhHHHHHHHhhhhcCceEEeccccccccC-CCcccccCCC
Q psy5991         178 ASQP---------GAALEQLHVFALAHILRRPIIVYGVKYVKSFR-GEDIGYARFE  223 (223)
Q Consensus       178 As~p---------g~sLEeiHIFvLAnILRRPIIVy~~~~lr~~r-Ge~l~~~rf~  223 (223)
                      |||+         |+|||||||||||||||||||||+|+|+||++ ||++||++|+
T Consensus       195 Asp~~~~~~~~~~y~sLEeiHIFvLAhVLRRPIIV~~d~~lr~~~~Ge~~~Pi~f~  250 (390)
T 3dkb_A          195 ASTDTPMARSGLQYNSLEEIHIFVLCNILRRPIIVISDKMLRSLESGSNFAPLKVG  250 (390)
T ss_dssp             TSSCCCSSSSSCSSCCCCHHHHHHHHHHTTSCEEEEECCCCTTCCCC----CCCCC
T ss_pred             hCCCCCCCCCcchhhhHHHHHHHHHHHHhcCCEEEEechhhccccCCCccCcCccC
Confidence            9984         57999999999999999999999999999996 9999999995

>3pfy_A OTU domain-containing protein 5; structural genomics, structural genomics consortium, SGC, PE C65 otubain, hydrolase; HET: MSE PG4; 1.70A {Homo sapiens} PDB: 3tmp_A* 3tmo_A*

Probab=98.85  E-value=4.5e-09  Score=88.79  Aligned_cols=90  Identities=20%  Similarity=0.402  Sum_probs=60.9

Q ss_pred             eeeeeeeCCCCcchhHHhhhhhhccccCchHHHHHHHHHHHhhhhhHHHHHHHHHHHhhcccccccChhHHHHHHHHHHH
Q psy5991          97 HLYALWNRSAGDCLLDSLMQATWGVFDRENVLRRALADSLAQASHLFYPRWKEYEDMHASLLHFSLDESQWEEDWASLVS  176 (223)
Q Consensus        97 rL~pL~t~GDGNCLlHA~S~~mWGv~Drdl~LRkaL~~~L~~~~~~f~rRW~~~e~~~s~~~~~~~~e~eW~~EW~~iv~  176 (223)
                      .|+.-.+.||||||++|+|.+++|-++....||+...+.|++....|           .+.+     +    .+|+.-++
T Consensus        58 gL~~~~I~~DGnCLFrAia~qL~g~~~~h~~LR~~vv~yi~~n~d~f-----------~~Fv-----~----~~~e~Y~~  117 (185)
T 3pfy_A           58 GFIIKQMKEDGACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYF-----------SNYV-----T----EDFTTYIN  117 (185)
T ss_dssp             CCEEECCCCSTTHHHHHHHHHHHSCGGGHHHHHHHHHHHHHHTHHHH-----------TTCC------------------
T ss_pred             CcEEEeeCCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHH-----------HHHH-----h----ccHHHHHH
Confidence            58888899999999999999999999999999999999999654332           1111     1    12333344


Q ss_pred             hhCCCcchhhHHHHHHHhhhhcCceEEecc
Q psy5991         177 LASQPGAALEQLHVFALAHILRRPIIVYGV  206 (223)
Q Consensus       177 ~As~pg~sLEeiHIFvLAnILRRPIIVy~~  206 (223)
                      .-..++.---++.|.+||+++++||+||..
T Consensus       118 ~m~~~~~WGg~iEL~AlS~~~~v~I~V~~~  147 (185)
T 3pfy_A          118 RKRKNNCHGNHIEMQAMAEMYNRPVEVYQY  147 (185)
T ss_dssp             --------CCHHHHHHHHHHHTSCEEEESS
T ss_pred             HhhCCCccchHHHHHHHHHhhCCcEEEEEC
Confidence            334454433467899999999999999974

>3by4_A OTU1, ubiquitin thioesterase OTU1; ubiquitin hydrolase, deubiquitinase, cell cycle, hydrolase; 1.55A {Saccharomyces cerevisiae} PDB: 3c0r_A

Probab=98.75  E-value=1.3e-08  Score=86.89  Aligned_cols=91  Identities=12%  Similarity=0.065  Sum_probs=68.2

Q ss_pred             eeeeeeeCCCCcchhHHhhhhhhccccCchHHHHHHHHHHHhhhhhHHHHHHHHHHHhhcccccccChhHHHHHHHHHHH
Q psy5991          97 HLYALWNRSAGDCLLDSLMQATWGVFDRENVLRRALADSLAQASHLFYPRWKEYEDMHASLLHFSLDESQWEEDWASLVS  176 (223)
Q Consensus        97 rL~pL~t~GDGNCLlHA~S~~mWGv~Drdl~LRkaL~~~L~~~~~~f~rRW~~~e~~~s~~~~~~~~e~eW~~EW~~iv~  176 (223)
                      .|+.-...||||||++|+|.++ |-.+.-..||+...+.|++....|..-.          .     +    ..|+.-++
T Consensus        19 ~l~~~~i~~DGnCLFrAva~qL-~~~~~~~~lR~~vv~yi~~n~d~f~e~~----------~-----~----~~~e~Y~~   78 (212)
T 3by4_A           19 VLSVHPVLDDNSCLFHAIAYGI-FKQDSVRDLREMVSKEVLNNPVKFNDAI----------L-----D----KPNKDYAQ   78 (212)
T ss_dssp             EEEEECCCCSTTHHHHHHHHHH-HSSCCSHHHHHHHHHHHHHCTTTTCHHH----------H-----T----SCHHHHHH
T ss_pred             CeEEEEeCCCCchHHHHHHHHh-CCchHHHHHHHHHHHHHHHCHHHHhhhh----------c-----C----CCHHHHHH
Confidence            5777889999999999999999 9999999999999999997654332110          0     1    22333344


Q ss_pred             hhCCCcchhhHHHHHHHhhhhcCceEEeccc
Q psy5991         177 LASQPGAALEQLHVFALAHILRRPIIVYGVK  207 (223)
Q Consensus       177 ~As~pg~sLEeiHIFvLAnILRRPIIVy~~~  207 (223)
                      .-+.|+.=--+++|.|||+++++||+||...
T Consensus        79 ~m~~~~~WGg~iEL~Als~~~~~~I~V~~~~  109 (212)
T 3by4_A           79 WILKMESWGGAIEIGIISDALAVAIYVVDID  109 (212)
T ss_dssp             HTTSTTSCCCHHHHHHHHHHHTCEEEEEETT
T ss_pred             HhcCCCEEccHHHHHHHHHHHCCCEEEEECC
Confidence            4455554445688999999999999999743

>3phx_A RNA-directed RNA polymerase L; OTU domain, DE-ubiquitinase, DE-isgylase, hydrolase-protein complex; 1.60A {Crimean-congo hemorrhagic fever virus} PDB: 3phw_A 3pt2_A 3pse_A 3prp_A 3prm_A

Probab=98.65  E-value=3.2e-08  Score=83.22  Aligned_cols=86  Identities=14%  Similarity=0.135  Sum_probs=61.2

Q ss_pred             eeeeeeCCCCcchhHHhhhhhhcc-ccC-----chHHHHHHHHHHHhhhhhHHHHHHHHHHHhhcccccccChhHHHHHH
Q psy5991          98 LYALWNRSAGDCLLDSLMQATWGV-FDR-----ENVLRRALADSLAQASHLFYPRWKEYEDMHASLLHFSLDESQWEEDW  171 (223)
Q Consensus        98 L~pL~t~GDGNCLlHA~S~~mWGv-~Dr-----dl~LRkaL~~~L~~~~~~f~rRW~~~e~~~s~~~~~~~~e~eW~~EW  171 (223)
                      ...++..||||||++|+|.++.|- ++.     -..||+...+.|++....+.               .   ++.|++. 
T Consensus        31 ~~v~rv~gDGnCLFrAva~qL~~~~~~~~~~~~~~~LR~~~~~yi~~~~~~~~---------------~---~~~~~~Y-   91 (185)
T 3phx_A           31 FEIVRQPGDGNCFYHSIAELTMPNKTDHSYHYIKRLTESAARKYYQEEPEARL---------------V---GLSLEDY-   91 (185)
T ss_dssp             EEEECCCSSTTHHHHHHHHHHSTTCCTTTHHHHHHHHHHHHHHHGGGCTTHHH---------------H---CCCHHHH-
T ss_pred             eEEEccCCCCchHHHHHHHHHhCCCccchhhhHHHHHHHHHHHHHHhChHhhh---------------c---CCCHHHH-
Confidence            444667999999999999999996 666     67899999988886543310               1   2223333 


Q ss_pred             HHHHHhhCCCcchhhHHHHHHHhhhhcCceEEec
Q psy5991         172 ASLVSLASQPGAALEQLHVFALAHILRRPIIVYG  205 (223)
Q Consensus       172 ~~iv~~As~pg~sLEeiHIFvLAnILRRPIIVy~  205 (223)
                         ++.-..++.--.++.|.|||+++++||+||.
T Consensus        92 ---~~~m~~~~~WGg~iEL~Als~~~~v~I~V~~  122 (185)
T 3phx_A           92 ---LKRMLSDNEWGSTLEASMLAKEMGITIIIWT  122 (185)
T ss_dssp             ---HHHHTSTTCCCBHHHHHHHHHHHCCCEEEEE
T ss_pred             ---HHHhhCCCccCcHHHHHHHHHHHCCcEEEEE
Confidence               3333445443446779999999999999996

>3phu_A RNA-directed RNA polymerase L; OTU domain, DE-ubiquitinase, DE-isgylase, hydrolase; 2.20A {Crimean-congo hemorrhagic fever VIRUSIBAR10200}

Probab=98.56  E-value=6e-08  Score=83.97  Aligned_cols=86  Identities=14%  Similarity=0.145  Sum_probs=60.0

Q ss_pred             eeeeeeCCCCcchhHHhhhhhhcc-ccC-----chHHHHHHHHHHHhhhhhHHHHHHHHHHHhhcccccccChhHHHHHH
Q psy5991          98 LYALWNRSAGDCLLDSLMQATWGV-FDR-----ENVLRRALADSLAQASHLFYPRWKEYEDMHASLLHFSLDESQWEEDW  171 (223)
Q Consensus        98 L~pL~t~GDGNCLlHA~S~~mWGv-~Dr-----dl~LRkaL~~~L~~~~~~f~rRW~~~e~~~s~~~~~~~~e~eW~~EW  171 (223)
                      +..++..||||||++|+|.++.|- .+.     -..||+...+.|+.....+.               +   ++.|++.-
T Consensus        31 ~~V~rvpgDGnCLFrAVs~qL~~~~~~~~~~~~h~~LR~~va~yi~~n~d~~~---------------~---~~~feeY~   92 (219)
T 3phu_A           31 FEIVRQPGDGNCFYHSIAELTMPNKTDHSYHYIKRLTESAARKYYQEEPEARL---------------V---GLSLEDYL   92 (219)
T ss_dssp             EEEECCCCSSCHHHHHHHHHHCTTCCTTTHHHHHHHHHHHHHHHGGGCHHHHH---------------H---CCCHHHHH
T ss_pred             eEEEccCCCCchHHHHHHHHHhCCCccchhhhHHHHHHHHHHHHHHhChhhhh---------------c---CCCHHHHH
Confidence            444667999999999999999996 565     57899999988886543310               1   22233333


Q ss_pred             HHHHHhhCCCcchhhHHHHHHHhhhhcCceEEec
Q psy5991         172 ASLVSLASQPGAALEQLHVFALAHILRRPIIVYG  205 (223)
Q Consensus       172 ~~iv~~As~pg~sLEeiHIFvLAnILRRPIIVy~  205 (223)
                      +.|    ..++.--.++.|.+||+++++||+||.
T Consensus        93 ~~m----~~~g~WGG~iEL~AlS~~~~v~I~V~~  122 (219)
T 3phu_A           93 KRM----LSDNEWGSTLEASMLAKEMGITIIIWT  122 (219)
T ss_dssp             HHH----HSTTCCCCHHHHHHHHHHTTCCEEEEE
T ss_pred             HHh----cCCCccCCHHHHHHHHHHhCCCEEEEE
Confidence            333    334433345779999999999999994

>1tff_A Ubiquitin thiolesterase protein OTUB2; hydrolase; 2.10A {Homo sapiens} SCOP: d.3.1.11

Probab=96.21  E-value=0.018  Score=49.63  Aligned_cols=26  Identities=15%  Similarity=0.169  Sum_probs=20.9

Q ss_pred             CCcchhhHHHHHHHhhhhcCceEEec
Q psy5991         180 QPGAALEQLHVFALAHILRRPIIVYG  205 (223)
Q Consensus       180 ~pg~sLEeiHIFvLAnILRRPIIVy~  205 (223)
                      +.+.--.+++|-|||+.|+.||.|+-
T Consensus       170 ~~~~~~~~iei~ALa~aL~v~I~V~~  195 (234)
T 1tff_A          170 PMATECDHIQITALSQALSIALQVEY  195 (234)
T ss_dssp             STTCCCCHHHHHHHHHHHTCCEEEEE
T ss_pred             hhhcccccHHHHHHHHHhCCCEEEEE
Confidence            33433368999999999999999985

>2zfy_A Ubiquitin thioesterase OTUB1; otubain, structural genomics, structural genomics consortium, SGC, alternative splicing, hydrolase, immune response; 1.69A {Homo sapiens} PDB: 4ddg_B 4ddi_A

Probab=93.39  E-value=0.23  Score=42.59  Aligned_cols=26  Identities=27%  Similarity=0.257  Sum_probs=20.9

Q ss_pred             CCcchhhHHHHHHHhhhhcCceEEec
Q psy5991         180 QPGAALEQLHVFALAHILRRPIIVYG  205 (223)
Q Consensus       180 ~pg~sLEeiHIFvLAnILRRPIIVy~  205 (223)
                      +++.--.+++|-|||+.|+.||.|+-
T Consensus       173 ~~~~~~~~i~i~ALa~al~v~I~V~~  198 (234)
T 2zfy_A          173 PMCKESDHIHIIALAQALSVSIQVEY  198 (234)
T ss_dssp             STTCCCCHHHHHHHHHHHTCCEEEEE
T ss_pred             hHhhcCCHHHHHHHHHHhCCCEEEEE
Confidence            33433368999999999999999975

>4dhi_B Ubiquitin thioesterase otubain-like; ubiquitin E2 enzyme fold, ubiquitination, hydrolase-ligase C; 1.80A {Caenorhabditis elegans} PDB: 4dhj_A 4dhz_A

Probab=89.36  E-value=1.7  Score=38.91  Aligned_cols=25  Identities=8%  Similarity=0.009  Sum_probs=20.2

Q ss_pred             CCcchhhHHHHHHHhhhhcCceEEe
Q psy5991         180 QPGAALEQLHVFALAHILRRPIIVY  204 (223)
Q Consensus       180 ~pg~sLEeiHIFvLAnILRRPIIVy  204 (223)
                      |.+.--.++||-|||+.|.-||-|+
T Consensus       208 ~~~~e~d~leI~ALa~aL~v~I~V~  232 (284)
T 4dhi_B          208 PMWKDADHLAINSLIKAAGTRVRIE  232 (284)
T ss_dssp             STTCCCCHHHHHHHHHHTTCCEEEE
T ss_pred             ehhhcccHHHHHHHHHHhCCcEEEE
Confidence            3444447899999999999999774

>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A

Probab=89.11  E-value=1.8  Score=39.65  Aligned_cols=25  Identities=28%  Similarity=0.320  Sum_probs=20.4

Q ss_pred             CCcchhhHHHHHHHhhhhcCceEEe
Q psy5991         180 QPGAALEQLHVFALAHILRRPIIVY  204 (223)
Q Consensus       180 ~pg~sLEeiHIFvLAnILRRPIIVy  204 (223)
                      +.+.--.++||-+||+.|+-||.|+
T Consensus       338 ~~~~e~d~l~I~ALa~al~v~I~V~  362 (399)
T 4ddg_A          338 PMCKESDHIHIIALAQALSVSIQVE  362 (399)
T ss_dssp             STTCCBCHHHHHHHHHHHTCCCEEE
T ss_pred             eHHhhCcHHHHHHHHHHcCCcEEEE
Confidence            3344446899999999999999996

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	223
d1tffa_	228	Ubiquitin thiolesterase protein OTUB2 (Otubain-2)	94.73

>d1tffa_ d.3.1.11 (A:) Ubiquitin thiolesterase protein OTUB2 (Otubain-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Ubiquitin thiolesterase protein OTUB2 (Otubain-2)
domain: Ubiquitin thiolesterase protein OTUB2 (Otubain-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.73  E-value=0.023  Score=46.02  Aligned_cols=27  Identities=15%  Similarity=0.165  Sum_probs=22.2

Q ss_pred             CCCcchhhHHHHHHHhhhhcCceEEec
Q psy5991         179 SQPGAALEQLHVFALAHILRRPIIVYG  205 (223)
Q Consensus       179 s~pg~sLEeiHIFvLAnILRRPIIVy~  205 (223)
                      .+++.-..+++|=+||+.|+.||.|+-
T Consensus       163 ~~~~~e~d~ieI~aLa~al~v~I~V~~  189 (228)
T d1tffa_         163 EPMATECDHIQITALSQALSIALQVEY  189 (228)
T ss_dssp             SSTTCCCCHHHHHHHHHHHTCCEEEEE
T ss_pred             ccccccCCcHHHHHHHHHhCCCEEEEE
Confidence            445555568999999999999999984