Psyllid ID: psy6142

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480---
MVKLLLRADTHSRIDANYNEYDDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASLALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGTFLNWYQLAFFGACIPVPFLICMFLIPETPRWYIGRNKQKQARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTGCSEVFKAMYMRPLLISIGLMFFQQMSGINAVLASLTVSLGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAGSTINENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLTALLGTHGAFWLFGVVCLVGLFFVIIFVPETQGKSLEDIERNLTGGGSPDGGPRVSSFQRPRLP
cccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHcHHcHHHHHHHHHHHHHHHHHHHHcccccHHHHHHcccHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccccccccccHHHHccccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHccccHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHcccccccccccccccccccc
cccEEEEccccEEccHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHccHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHcccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHcHHHHHHHHHHHHHHHHHHHHcccEEEEEcHHHHHHcccccHHHHHHHHcccHcccccccccccHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHccccccccccHccccccccc
MVKLLLRADthsridanyneyddvKINYIQASwigslmplsalfggmaggplieslgrrttilstglpFIVSFLLIALANGVPMILAGRCVAGFCVGIASLalpvylgetvqpevrgtlgllptflgniGILTCFIAGTFLNWYQLAffgacipvpFLICMflipetprwyigrNKQKQARKALQWLRGKDADISREFAEIEKMnnegnaaedenstgcSEVFKAMYMRPLLISIGLMFFQQMSGINAVLASLTVSLGSMIVGFAsaytspaipsmnqmgsrvspteeedagstineNYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFyfkstgsdvselgwlpLLSFVVYVIGFSigfgsipwlmmgeilpakirGSAASLATAFNWTCTFIVTKTFNDLTALLGTHGAFWLFGVVCLVGLFFVIIFvpetqgkslEDIERNltgggspdggprvssfqrprlp
MVKLLLradthsridanyneyddVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASLALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGTFLNWYQLAFFGACIPVPFLICMFLIPETPRWYIGRNKQKQARKALQWLRGKDADISREFAEIEKmnnegnaaedenSTGCSEVFKAMYMRPLLISIGLMFFQQMSGINAVLASLTVSLGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAGSTINENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLTALLGTHGAFWLFGVVCLVGLFFVIIFVPETQGKSLEDIERNLtgggspdggprvssfqrprlp
MVKLLLRADTHSRIDANYNEYDDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASLALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGTFLNWYQLAFFGACIPVPFLICMFLIPETPRWYIGRNKQKQARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTGCSEVFKAMYMRPLLISIGLMFFQQMSGINAVLASLTVSLGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAGSTINENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLTALLGTHGAfwlfgvvclvglffviifvPETQGKSLEDIERNLTGGGSPDGGPRVSSFQRPRLP
*****LRADTHSRIDANYNEYDDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASLALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGTFLNWYQLAFFGACIPVPFLICMFLIPETPRWYIGRNKQKQARKALQWLRG*****************************CSEVFKAMYMRPLLISIGLMFFQQMSGINAVLASLTVSLGSMIVGFASAYT*************************INENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSIPWLMMGEIL************TAFNWTCTFIVTKTFNDLTALLGTHGAFWLFGVVCLVGLFFVIIFVPE**********************************
MVKLLLRADTHSRIDANYNEYDDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASLALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGTFLNWYQLAFFGACIPVPFLICMFLIPETPRWYIGRNKQKQARKALQWLRGKDADISREFAEI*******************EVFKAMYMRPLLISIGLMFFQQMSGINAVLASLTVSLGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAGSTINENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLTALLGTHGAFWLFGVVCLVGLFFVIIFVPETQGKSLEDIE************************
MVKLLLRADTHSRIDANYNEYDDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASLALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGTFLNWYQLAFFGACIPVPFLICMFLIPETPRWYIGRNKQKQARKALQWLRGKDADISREFAEIEKMNNE**********GCSEVFKAMYMRPLLISIGLMFFQQMSGINAVLASLTVSLGSMIVGFASAYTSPAIPSM****************STINENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLTALLGTHGAFWLFGVVCLVGLFFVIIFVPETQGKSLEDIERNLTGG******************
MVKLLLRADTHSRIDANYNEYDDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASLALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGTFLNWYQLAFFGACIPVPFLICMFLIPETPRWYIGRNKQKQARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTGCSEVFKAMYMRPLLISIGLMFFQQMSGINAVLASLTVSLGSMIVGFASAYTSPAIPS*****************STINENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLTALLGTHGAFWLFGVVCLVGLFFVIIFVPETQGKSLEDIERNLTGG******************
ooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MVKLLLRADTHSRIDANYNEYDDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCVAGFCVGIASLALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGTFLNWYQLAFFGACIPVPFLICMFLIPETPRWYIGRNKQKQARKALQWLRGKDADxxxxxxxxxxxxxxxxxxxxxNSTGCSEVFKAMYMRPLLISIGLMFFQQMSGINAVLASLTVSLGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAGSTINENYCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLTALLGTHGAFWLFGVVCLVGLFFVIIFVPETQGKSLEDIERNLTGGGSPDGGPRVSSFQRPRLP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query483 2.2.26 [Sep-21-2011]
B0WC46517 Facilitated trehalose tra N/A N/A 0.886 0.827 0.553 1e-153
B4QBN3488 Facilitated trehalose tra N/A N/A 0.828 0.819 0.623 1e-152
Q7PIR5793 Facilitated trehalose tra yes N/A 0.828 0.504 0.616 1e-151
B4HNS1488 Facilitated trehalose tra N/A N/A 0.828 0.819 0.618 1e-151
Q8MKK4488 Facilitated trehalose tra yes N/A 0.828 0.819 0.616 1e-151
B4HNS0857 Facilitated trehalose tra N/A N/A 0.863 0.486 0.604 1e-150
Q291H8868 Facilitated trehalose tra yes N/A 0.830 0.461 0.617 1e-150
B4GAP7869 Facilitated trehalose tra N/A N/A 0.830 0.461 0.617 1e-150
B3MG58866 Facilitated trehalose tra N/A N/A 0.863 0.481 0.602 1e-150
B3NSE1856 Facilitated trehalose tra N/A N/A 0.828 0.467 0.628 1e-149
>sp|B0WC46|TRET1_CULQU Facilitated trehalose transporter Tret1 OS=Culex quinquefasciatus GN=Tret1 PE=3 SV=1 Back     alignment and function desciption
 Score =  541 bits (1394), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 281/508 (55%), Positives = 341/508 (67%), Gaps = 80/508 (15%)

Query: 1   MVKLLLRADTH--------------------------------------------SRIDA 16
           MVKLL+RADTH                                            S  D 
Sbjct: 28  MVKLLMRADTHVSFTVPAEEPVAKCTFSQVLAALSVSLGSMVVGFSSAYTSPALVSMKDR 87

Query: 17  NYNEYDDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLI 76
           N   ++   +     SW+G +MPL+ L GG+ GGPLIE LGR+ TIL+T  PFI+S+LLI
Sbjct: 88  NITSFE---VTDQSGSWVGGIMPLAGLVGGILGGPLIEYLGRKNTILATATPFIISWLLI 144

Query: 77  ALANGVPMILAGRCVAGFCVGIASLALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFI 136
           A A  V M+L GR ++GF VG+ASL+LPVYLGETVQPEVRGTLGLLPT  GNIGIL CF+
Sbjct: 145 ACATHVAMVLVGRALSGFSVGVASLSLPVYLGETVQPEVRGTLGLLPTAFGNIGILLCFV 204

Query: 137 AGTFLNWYQLAFFGACIPVPFLICMFLIPETPRWYIGRNKQKQARKALQWLRGKDADISR 196
           AG +++W +LAF GA +PVPFLI MFLIPETPRWY+ R +  +ARKALQWLRGK AD+  
Sbjct: 205 AGNYMDWSELAFLGATLPVPFLILMFLIPETPRWYVSRGRDDRARKALQWLRGKKADVDP 264

Query: 197 EFAEIEKMNNEGNAAEDENSTGCSEVFKAMYMRPLLISIGLMFFQQMSGINAVLASLTVS 256
           E   I K + +  A    + +   ++ K   ++PLLIS+GLMFFQQ+SGINAV+      
Sbjct: 265 ELKGIIKSHQD--AERHASQSAMLDLLKKTNLKPLLISLGLMFFQQLSGINAVI------ 316

Query: 257 LGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAGSTINENYCTIIVGVVNLLSVLIAT 316
                      YT                   +DAGSTI+EN CTIIVGVVN ++  IAT
Sbjct: 317 ----------FYTVQIF---------------QDAGSTIDENLCTIIVGVVNFIATFIAT 351

Query: 317 ALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIG 376
            LIDRLGRK+LLYIS  AMI+TL TLG FFY K+ G DVS +GWLPL SFV++V+GFS+G
Sbjct: 352 LLIDRLGRKMLLYISDIAMIITLMTLGGFFYVKNNGGDVSHIGWLPLASFVIFVLGFSLG 411

Query: 377 FGSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLTALLGTHGAFWLFGVVC 436
           FG IPWLMMGEILP KIRGSAAS+ATAFNW+CTF+VTKTF D+ A +GTHGAFW+FG VC
Sbjct: 412 FGPIPWLMMGEILPGKIRGSAASVATAFNWSCTFVVTKTFADIIASIGTHGAFWMFGSVC 471

Query: 437 LVGLFFVIIFVPETQGKSLEDIERNLTG 464
           +VGL FVI++VPETQGKSLEDIER + G
Sbjct: 472 VVGLVFVIMYVPETQGKSLEDIERKMCG 499
High-capacity facilitative transporter for trehalose. Does not transport maltose, sucrose or lactose. Mediates the bidirectional transfer of trehalose. Responsible for the transport of trehalose synthesized in the fat body and the incorporation of trehalose into other tissues that require a carbon source, thereby regulating trehalose levels in the hemolymph.
Culex quinquefasciatus (taxid: 7176)
>sp|B4QBN3|TRE12_DROSI Facilitated trehalose transporter Tret1-2 homolog OS=Drosophila simulans GN=Tret1-2 PE=3 SV=1 Back     alignment and function description
>sp|Q7PIR5|TRET1_ANOGA Facilitated trehalose transporter Tret1 OS=Anopheles gambiae GN=Tret1 PE=1 SV=3 Back     alignment and function description
>sp|B4HNS1|TRE12_DROSE Facilitated trehalose transporter Tret1-2 homolog OS=Drosophila sechellia GN=Tret1-2 PE=3 SV=1 Back     alignment and function description
>sp|Q8MKK4|TRE12_DROME Facilitated trehalose transporter Tret1-2 homolog OS=Drosophila melanogaster GN=Tret1-2 PE=2 SV=1 Back     alignment and function description
>sp|B4HNS0|TRE11_DROSE Facilitated trehalose transporter Tret1-1 OS=Drosophila sechellia GN=Tret1-1 PE=3 SV=1 Back     alignment and function description
>sp|Q291H8|TRET1_DROPS Facilitated trehalose transporter Tret1 OS=Drosophila pseudoobscura pseudoobscura GN=Tret1 PE=3 SV=3 Back     alignment and function description
>sp|B4GAP7|TRET1_DROPE Facilitated trehalose transporter Tret1 OS=Drosophila persimilis GN=Tret1 PE=3 SV=2 Back     alignment and function description
>sp|B3MG58|TRET1_DROAN Facilitated trehalose transporter Tret1 OS=Drosophila ananassae GN=Tret1 PE=3 SV=2 Back     alignment and function description
>sp|B3NSE1|TRET1_DROER Facilitated trehalose transporter Tret1 OS=Drosophila erecta GN=Tret1 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query483
328723539 667 PREDICTED: facilitated trehalose transpo 0.836 0.605 0.659 1e-165
193674084 646 PREDICTED: facilitated trehalose transpo 0.836 0.625 0.659 1e-165
291461575499 sugar transporter 8 [Nilaparvata lugens] 0.881 0.853 0.641 1e-162
170036862517 sugar transporter [Culex quinquefasciatu 0.886 0.827 0.553 1e-151
195582500488 GD10808 [Drosophila simulans] gi|3006811 0.828 0.819 0.623 1e-150
242025506494 sugar transporter, putative [Pediculus h 0.896 0.876 0.549 1e-150
158294383 793 AGAP005563-PA [Anopheles gambiae str. PE 0.828 0.504 0.616 1e-150
195333489488 GM21299 [Drosophila sechellia] gi|300681 0.828 0.819 0.618 1e-150
24652793488 trehalose transporter 1-2, isoform A [Dr 0.828 0.819 0.616 1e-149
195333487 857 GM21298 [Drosophila sechellia] gi|300681 0.863 0.486 0.604 1e-148
>gi|328723539|ref|XP_003247868.1| PREDICTED: facilitated trehalose transporter Tret1-like isoform 2 [Acyrthosiphon pisum] Back     alignment and taxonomy information
 Score =  587 bits (1514), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 289/438 (65%), Positives = 341/438 (77%), Gaps = 34/438 (7%)

Query: 30  QASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGR 89
           + SWIGSLMPL+AL GGMAGGPLIES+GR+TTIL+TG+PFI+SF+LIA+A  V M++AGR
Sbjct: 242 EGSWIGSLMPLAALIGGMAGGPLIESIGRKTTILATGIPFIISFILIAMAVNVQMVMAGR 301

Query: 90  CVAGFCVGIASLALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGTFLNWYQLAFF 149
            +AGFCVG+ASL LPVYLGETVQP+VRGTLGLLPT LGN GIL CFIAG +LNW  LA  
Sbjct: 302 AIAGFCVGVASLGLPVYLGETVQPQVRGTLGLLPTTLGNSGILLCFIAGKYLNWQMLAIL 361

Query: 150 GACIPVPFLICMFLIPETPRWYIGRNKQKQARKALQWLRGKDADISREFAEIEKMNNEGN 209
           GACIP+PFL+CMFLIPETP+WYI RNK K+A+KALQWLRGKDAD+++EF+EIEK N+ G 
Sbjct: 362 GACIPIPFLVCMFLIPETPQWYISRNKSKKAKKALQWLRGKDADVTQEFSEIEKANHMG- 420

Query: 210 AAEDENSTGCSEVFKAMYMRPLLISIGLMFFQQMSGINAVLASLTVSLGSMIVGFASAYT 269
             ++E   G   +F  MY +PLLIS+GLM FQQ+SGINAV+                 YT
Sbjct: 421 --KNEEMPGYLSLFSKMYSKPLLISMGLMLFQQLSGINAVI----------------FYT 462

Query: 270 SPAIPSMNQMGSRVSPTEEEDAGSTINENYCTIIVGVVNLLSVLIATALIDRLGRKILLY 329
                              ++AGSTI+EN CTIIVG+VN LS  IAT LID+LGRKILLY
Sbjct: 463 VKIF---------------KEAGSTIDENLCTIIVGIVNFLSTFIATGLIDKLGRKILLY 507

Query: 330 ISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSIPWLMMGEIL 389
            SS  M +TL TLGTFF +K++G DVS+ GWLPL SFV ++IGF+IGFG IPWLMMGEIL
Sbjct: 508 ASSATMAVTLITLGTFFNYKNSGYDVSQYGWLPLASFVFFIIGFAIGFGPIPWLMMGEIL 567

Query: 390 PAKIRGSAASLATAFNWTCTFIVTKTFNDLTALLGTHGAFWLFGVVCLVGLFFVIIFVPE 449
           PAKIRG+AASLATAFNW CTF+VTKTF DL  + GT G FW+FG +CL+GL F+I  VPE
Sbjct: 568 PAKIRGTAASLATAFNWACTFVVTKTFADLLRVFGTDGTFWMFGGICLMGLVFIIFCVPE 627

Query: 450 TQGKSLEDIERNLTGGGS 467
           TQGKSLEDIERNLTG G 
Sbjct: 628 TQGKSLEDIERNLTGVGK 645

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|193674084|ref|XP_001950990.1| PREDICTED: facilitated trehalose transporter Tret1-like isoform 1 [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|291461575|dbj|BAI83422.1| sugar transporter 8 [Nilaparvata lugens] Back     alignment and taxonomy information
>gi|170036862|ref|XP_001846280.1| sugar transporter [Culex quinquefasciatus] gi|300681185|sp|B0WC46.1|TRET1_CULQU RecName: Full=Facilitated trehalose transporter Tret1 gi|167879815|gb|EDS43198.1| sugar transporter [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|195582500|ref|XP_002081065.1| GD10808 [Drosophila simulans] gi|300681182|sp|B4QBN3.1|TRE12_DROSI RecName: Full=Facilitated trehalose transporter Tret1-2 homolog gi|194193074|gb|EDX06650.1| GD10808 [Drosophila simulans] Back     alignment and taxonomy information
>gi|242025506|ref|XP_002433165.1| sugar transporter, putative [Pediculus humanus corporis] gi|212518706|gb|EEB20427.1| sugar transporter, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|158294383|ref|XP_315568.3| AGAP005563-PA [Anopheles gambiae str. PEST] gi|300681253|sp|Q7PIR5.3|TRET1_ANOGA RecName: Full=Facilitated trehalose transporter Tret1; Short=AgTRET1 gi|157015538|gb|EAA44045.3| AGAP005563-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|195333489|ref|XP_002033423.1| GM21299 [Drosophila sechellia] gi|300681181|sp|B4HNS1.1|TRE12_DROSE RecName: Full=Facilitated trehalose transporter Tret1-2 homolog gi|194125393|gb|EDW47436.1| GM21299 [Drosophila sechellia] Back     alignment and taxonomy information
>gi|24652793|ref|NP_610694.1| trehalose transporter 1-2, isoform A [Drosophila melanogaster] gi|75016605|sp|Q8MKK4.1|TRE12_DROME RecName: Full=Facilitated trehalose transporter Tret1-2 homolog; Short=DmTret1-2 gi|21483232|gb|AAM52591.1| AT19440p [Drosophila melanogaster] gi|21627445|gb|AAM68715.1| trehalose transporter 1-2, isoform A [Drosophila melanogaster] gi|164454397|dbj|BAF96745.1| trehalose transporter DmTRET1-2 [Drosophila melanogaster] gi|220949660|gb|ACL87373.1| CG8234-PA [synthetic construct] Back     alignment and taxonomy information
>gi|195333487|ref|XP_002033422.1| GM21298 [Drosophila sechellia] gi|300681179|sp|B4HNS0.1|TRE11_DROSE RecName: Full=Facilitated trehalose transporter Tret1-1 gi|194125392|gb|EDW47435.1| GM21298 [Drosophila sechellia] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query483
UNIPROTKB|B0WC46517 Tret1 "Facilitated trehalose t 0.449 0.419 0.616 1.7e-137
FB|FBgn0033644488 Tret1-2 "Trehalose transporter 0.517 0.512 0.564 9.2e-135
UNIPROTKB|Q7PIR5793 Tret1 "Facilitated trehalose t 0.472 0.287 0.587 2.5e-134
UNIPROTKB|B3MG58866 Tret1 "Facilitated trehalose t 0.509 0.284 0.582 5.2e-134
UNIPROTKB|A5LGM7504 Tret1 "Facilitated trehalose t 0.476 0.456 0.587 1.1e-133
UNIPROTKB|B4GAP7869 Tret1 "Facilitated trehalose t 0.476 0.264 0.620 1.4e-133
UNIPROTKB|Q291H8868 Tret1 "Facilitated trehalose t 0.476 0.264 0.620 1.4e-133
UNIPROTKB|B3NSE1856 Tret1 "Facilitated trehalose t 0.484 0.273 0.598 1.8e-133
UNIPROTKB|B4QBN2857 Tret1-1 "Facilitated trehalose 0.484 0.273 0.606 2.9e-133
UNIPROTKB|B4HNS0857 Tret1-1 "Facilitated trehalose 0.484 0.273 0.602 3.7e-133
UNIPROTKB|B0WC46 Tret1 "Facilitated trehalose transporter Tret1" [Culex quinquefasciatus (taxid:7176)] Back     alignment and assigned GO terms
 Score = 716 (257.1 bits), Expect = 1.7e-137, Sum P(3) = 1.7e-137
 Identities = 135/219 (61%), Positives = 169/219 (77%)

Query:    32 SWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANGVPMILAGRCV 91
             SW+G +MPL+ L GG+ GGPLIE LGR+ TIL+T  PFI+S+LLIA A  V M+L GR +
Sbjct:   100 SWVGGIMPLAGLVGGILGGPLIEYLGRKNTILATATPFIISWLLIACATHVAMVLVGRAL 159

Query:    92 AGFCVGIASLALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGTFLNWYQLAFFGA 151
             +GF VG+ASL+LPVYLGETVQPEVRGTLGLLPT  GNIGIL CF+AG +++W +LAF GA
Sbjct:   160 SGFSVGVASLSLPVYLGETVQPEVRGTLGLLPTAFGNIGILLCFVAGNYMDWSELAFLGA 219

Query:   152 CIPVPFLICMFLIPETPRWYIGRNKQKQARKALQWLRGKDADISREFAEIEKMNNEGNAA 211
              +PVPFLI MFLIPETPRWY+ R +  +ARKALQWLRGK AD+  E   I K + +  A 
Sbjct:   220 TLPVPFLILMFLIPETPRWYVSRGRDDRARKALQWLRGKKADVDPELKGIIKSHQD--AE 277

Query:   212 EDENSTGCSEVFKAMYMRPLLISIGLMFFQQMSGINAVL 250
                + +   ++ K   ++PLLIS+GLMFFQQ+SGINAV+
Sbjct:   278 RHASQSAMLDLLKKTNLKPLLISLGLMFFQQLSGINAVI 316
GO:0015574 "trehalose transmembrane transporter activity" evidence=ISS
GO:0015771 "trehalose transport" evidence=ISS
GO:0044459 "plasma membrane part" evidence=ISS
FB|FBgn0033644 Tret1-2 "Trehalose transporter 1-2" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|Q7PIR5 Tret1 "Facilitated trehalose transporter Tret1" [Anopheles gambiae (taxid:7165)] Back     alignment and assigned GO terms
UNIPROTKB|B3MG58 Tret1 "Facilitated trehalose transporter Tret1" [Drosophila ananassae (taxid:7217)] Back     alignment and assigned GO terms
UNIPROTKB|A5LGM7 Tret1 "Facilitated trehalose transporter Tret1" [Polypedilum vanderplanki (taxid:319348)] Back     alignment and assigned GO terms
UNIPROTKB|B4GAP7 Tret1 "Facilitated trehalose transporter Tret1" [Drosophila persimilis (taxid:7234)] Back     alignment and assigned GO terms
UNIPROTKB|Q291H8 Tret1 "Facilitated trehalose transporter Tret1" [Drosophila pseudoobscura pseudoobscura (taxid:46245)] Back     alignment and assigned GO terms
UNIPROTKB|B3NSE1 Tret1 "Facilitated trehalose transporter Tret1" [Drosophila erecta (taxid:7220)] Back     alignment and assigned GO terms
UNIPROTKB|B4QBN2 Tret1-1 "Facilitated trehalose transporter Tret1-1" [Drosophila simulans (taxid:7240)] Back     alignment and assigned GO terms
UNIPROTKB|B4HNS0 Tret1-1 "Facilitated trehalose transporter Tret1-1" [Drosophila sechellia (taxid:7238)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8MKK4TRE12_DROMENo assigned EC number0.61660.82810.8196yesN/A
B0WC46TRET1_CULQUNo assigned EC number0.55310.88610.8278N/AN/A
B4QBN3TRE12_DROSINo assigned EC number0.62350.82810.8196N/AN/A
P46333CSBC_BACSUNo assigned EC number0.30200.82600.8655yesN/A
A9ZSY2TRET1_APILINo assigned EC number0.57170.85300.8207N/AN/A
B4HNS1TRE12_DROSENo assigned EC number0.61890.82810.8196N/AN/A
Q291H8TRET1_DROPSNo assigned EC number0.61750.83020.4619yesN/A
A5LGM7TRET1_POLVANo assigned EC number0.61130.84260.8075N/AN/A
Q9UGQ3GTR6_HUMANNo assigned EC number0.31800.83020.7909yesN/A
Q9JJZ1GTR8_RATNo assigned EC number0.31150.82400.8326yesN/A
Q9FRL3ERDL6_ARATHNo assigned EC number0.34310.83020.8234yesN/A
Q7PIR5TRET1_ANOGANo assigned EC number0.61660.82810.5044yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query483
pfam00083449 pfam00083, Sugar_tr, Sugar (and other) transporter 3e-67
TIGR00879481 TIGR00879, SP, MFS transporter, sugar porter (SP) 9e-64
PRK10077479 PRK10077, xylE, D-xylose transporter XylE; Provisi 2e-50
TIGR00898505 TIGR00898, 2A0119, cation transport protein 2e-11
cd06174352 cd06174, MFS, The Major Facilitator Superfamily (M 2e-11
pfam07690346 pfam07690, MFS_1, Major Facilitator Superfamily 2e-09
TIGR00895398 TIGR00895, 2A0115, benzoate transport 8e-08
cd06174352 cd06174, MFS, The Major Facilitator Superfamily (M 3e-07
TIGR00887502 TIGR00887, 2A0109, phosphate:H+ symporter 2e-05
cd06174352 cd06174, MFS, The Major Facilitator Superfamily (M 3e-04
TIGR00883394 TIGR00883, 2A0106, metabolite-proton symporter 3e-04
TIGR00710385 TIGR00710, efflux_Bcr_CflA, drug resistance transp 0.001
>gnl|CDD|215702 pfam00083, Sugar_tr, Sugar (and other) transporter Back     alignment and domain information 
 Score =  222 bits (567), Expect = 3e-67
 Identities = 122/441 (27%), Positives = 204/441 (46%), Gaps = 48/441 (10%)

Query: 29  IQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALANG--VPMIL 86
           + +  I S+  +  L G +  G L +  GR+ ++L   + F++  LL   A G    M++
Sbjct: 46  VLSGLIVSIFSVGCLIGSLFAGKLGDRFGRKKSLLIGNVLFVIGALLQGFAKGKSFYMLI 105

Query: 87  AGRCVAGFCVGIASLALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGTFLNWYQ- 145
            GR + G  VG  S+ +P+Y+ E    ++RG LG L       GIL   I G  LN Y  
Sbjct: 106 VGRVIVGLGVGGISVLVPMYISEIAPKKLRGALGSLYQLGITFGILVAAIIGLGLNKYSN 165

Query: 146 ------LAFFGACIPVPFLICMFLIPETPRWYIGRNKQKQARKALQWLRGKDADISREFA 199
                          +  LI +  +PE+PRW + + K ++AR  L  LRG  +D+ +E  
Sbjct: 166 SDGWRIPLGLQFVPAILLLIGLLFLPESPRWLVLKGKLEEARAVLAKLRG-VSDVDQEIQ 224

Query: 200 EIEKMNNEGNAAEDENSTGCSEVFKAMYMRPLLISIGLMFFQQMSGINAVLASLTVSLGS 259
           E +         E E ++           + LL+ + L  FQQ++GINA+          
Sbjct: 225 EEKDSLERSV--EAEKASWLELFRGKTVRQRLLMGVMLQIFQQLTGINAIF--------- 273

Query: 260 MIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAGSTINENYCTIIVGVVNLLSVLIATALI 319
                   Y SP I     +                +    TIIVGVVN +   IA  L+
Sbjct: 274 --------YYSPTIFETLGLS---------------DSLLVTIIVGVVNFVFTFIAIFLV 310

Query: 320 DRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGS 379
           DR GR+ LL + +  M +    LG      +        G + ++  ++++  F++G+G 
Sbjct: 311 DRFGRRPLLLLGAAGMAICFLVLGVALLGVAK---SKGAGIVAIVFILLFIAFFALGWGP 367

Query: 380 IPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLTALLGTHGAFWLFGVVCLVG 439
           +PW+++ E+ P  +R  A ++ATA NW   F++   F  +T  +G    F +F  + ++ 
Sbjct: 368 VPWVIVSELFPLGVRPKAMAIATAANWLANFLIGFLFPIITGAIGG-YVFLVFAGLLVLF 426

Query: 440 LFFVIIFVPETQGKSLEDIER 460
           + FV  FVPET+G++LE+I+ 
Sbjct: 427 ILFVFFFVPETKGRTLEEIDE 447

Length = 449
>gnl|CDD|233165 TIGR00879, SP, MFS transporter, sugar porter (SP) family Back     alignment and domain information
>gnl|CDD|182225 PRK10077, xylE, D-xylose transporter XylE; Provisional Back     alignment and domain information
>gnl|CDD|233176 TIGR00898, 2A0119, cation transport protein Back     alignment and domain information
>gnl|CDD|119392 cd06174, MFS, The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information
>gnl|CDD|219516 pfam07690, MFS_1, Major Facilitator Superfamily Back     alignment and domain information
>gnl|CDD|233175 TIGR00895, 2A0115, benzoate transport Back     alignment and domain information
>gnl|CDD|119392 cd06174, MFS, The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information
>gnl|CDD|129965 TIGR00887, 2A0109, phosphate:H+ symporter Back     alignment and domain information
>gnl|CDD|119392 cd06174, MFS, The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information
>gnl|CDD|233168 TIGR00883, 2A0106, metabolite-proton symporter Back     alignment and domain information
>gnl|CDD|233099 TIGR00710, efflux_Bcr_CflA, drug resistance transporter, Bcr/CflA subfamily Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 483
KOG0569|consensus485 100.0
KOG0254|consensus513 100.0
PF00083451 Sugar_tr: Sugar (and other) transporter; InterPro: 100.0
TIGR00887502 2A0109 phosphate:H+ symporter. This model represen 100.0
KOG0253|consensus528 100.0
TIGR01299742 synapt_SV2 synaptic vesicle protein SV2. This mode 100.0
PRK10077479 xylE D-xylose transporter XylE; Provisional 100.0
TIGR00898505 2A0119 cation transport protein. 100.0
KOG0255|consensus521 100.0
KOG0252|consensus538 100.0
TIGR00879481 SP MFS transporter, sugar porter (SP) family. This 100.0
PRK10642490 proline/glycine betaine transporter; Provisional 100.0
PRK10406432 alpha-ketoglutarate transporter; Provisional 99.97
PRK09952438 shikimate transporter; Provisional 99.96
PRK12307426 putative sialic acid transporter; Provisional 99.95
TIGR02332412 HpaX 4-hydroxyphenylacetate permease. This protein 99.95
TIGR00903368 2A0129 major facilitator 4 family protein. This fa 99.95
TIGR00891405 2A0112 putative sialic acid transporter. 99.95
PRK15075434 citrate-proton symporter; Provisional 99.95
PRK11551406 putative 3-hydroxyphenylpropionic transporter MhpT 99.94
TIGR00893399 2A0114 d-galactonate transporter. 99.94
PRK03545390 putative arabinose transporter; Provisional 99.94
PRK09705393 cynX putative cyanate transporter; Provisional 99.94
PRK11663434 regulatory protein UhpC; Provisional 99.94
COG2814394 AraJ Arabinose efflux permease [Carbohydrate trans 99.94
PRK03893496 putative sialic acid transporter; Provisional 99.94
PRK09556467 uhpT sugar phosphate antiporter; Reviewed 99.93
TIGR00890377 2A0111 Oxalate/Formate Antiporter. 99.93
PRK10489417 enterobactin exporter EntS; Provisional 99.93
PRK11273452 glpT sn-glycerol-3-phosphate transporter; Provisio 99.93
PRK05122399 major facilitator superfamily transporter; Provisi 99.93
TIGR00895398 2A0115 benzoate transport. 99.92
TIGR00883394 2A0106 metabolite-proton symporter. This model rep 99.92
PRK12382392 putative transporter; Provisional 99.92
TIGR00881379 2A0104 phosphoglycerate transporter family protein 99.91
TIGR00712438 glpT glycerol-3-phosphate transporter. This model 99.91
PRK10091382 MFS transport protein AraJ; Provisional 99.91
PRK15402406 multidrug efflux system translocase MdfA; Provisio 99.9
TIGR00899375 2A0120 sugar efflux transporter. This family of pr 99.9
cd06174352 MFS The Major Facilitator Superfamily (MFS) is a l 99.9
TIGR00711485 efflux_EmrB drug resistance transporter, EmrB/QacA 99.9
PRK14995495 methyl viologen resistance protein SmvA; Provision 99.9
PLN00028476 nitrate transmembrane transporter; Provisional 99.9
TIGR00900365 2A0121 H+ Antiporter protein. 99.9
PRK10504471 putative transporter; Provisional 99.9
TIGR00710385 efflux_Bcr_CflA drug resistance transporter, Bcr/C 99.9
PRK10213394 nepI ribonucleoside transporter; Reviewed 99.9
PRK03699394 putative transporter; Provisional 99.9
PRK10473392 multidrug efflux system protein MdtL; Provisional 99.89
TIGR00894465 2A0114euk Na(+)-dependent inorganic phosphate cotr 99.89
TIGR00897402 2A0118 polyol permease family. This family of prot 99.89
PRK11195393 lysophospholipid transporter LplT; Provisional 99.88
PRK11102377 bicyclomycin/multidrug efflux system; Provisional 99.88
PRK15403413 multidrug efflux system protein MdtM; Provisional 99.88
PRK03633381 putative MFS family transporter protein; Provision 99.88
PRK09874408 drug efflux system protein MdtG; Provisional 99.88
PF07690352 MFS_1: Major Facilitator Superfamily; InterPro: IP 99.88
TIGR00892455 2A0113 monocarboxylate transporter 1. 99.87
PRK11043401 putative transporter; Provisional 99.87
PRK08633 1146 2-acyl-glycerophospho-ethanolamine acyltransferase 99.87
PRK15034462 nitrate/nitrite transport protein NarU; Provisiona 99.87
PRK10133438 L-fucose transporter; Provisional 99.86
TIGR00886366 2A0108 nitrite extrusion protein (nitrite facilita 99.86
TIGR00889418 2A0110 nucleoside transporter. This family of prot 99.85
PRK11010491 ampG muropeptide transporter; Validated 99.85
TIGR00896355 CynX cyanate transporter. This family of proteins 99.84
COG2271448 UhpC Sugar phosphate permease [Carbohydrate transp 99.84
PRK10054395 putative transporter; Provisional 99.83
PRK11652394 emrD multidrug resistance protein D; Provisional 99.83
PRK15011393 sugar efflux transporter B; Provisional 99.83
PRK11646400 multidrug resistance protein MdtH; Provisional 99.83
KOG2532|consensus466 99.82
TIGR00885410 fucP L-fucose:H+ symporter permease. This family d 99.82
PRK09528420 lacY galactoside permease; Reviewed 99.82
PF06609599 TRI12: Fungal trichothecene efflux pump (TRI12); I 99.82
COG2223417 NarK Nitrate/nitrite transporter [Inorganic ion tr 99.81
TIGR00792437 gph sugar (Glycoside-Pentoside-Hexuronide) transpo 99.81
PRK11902402 ampG muropeptide transporter; Reviewed 99.81
TIGR00901356 2A0125 AmpG-related permease. 99.8
PRK06814 1140 acylglycerophosphoethanolamine acyltransferase; Pr 99.8
TIGR00882396 2A0105 oligosaccharide:H+ symporter. 99.8
TIGR00902382 2A0127 phenyl proprionate permease family protein. 99.78
PRK10207489 dipeptide/tripeptide permease B; Provisional 99.77
TIGR00924475 yjdL_sub1_fam amino acid/peptide transporter (Pept 99.76
KOG1330|consensus493 99.76
PTZ00207591 hypothetical protein; Provisional 99.76
PRK11128382 putative 3-phenylpropionic acid transporter; Provi 99.75
KOG2533|consensus495 99.73
TIGR01301477 GPH_sucrose GPH family sucrose/H+ symporter. This 99.73
KOG2615|consensus451 99.72
PF05977524 MFS_3: Transmembrane secretion effector; InterPro: 99.72
TIGR00805633 oat sodium-independent organic anion transporter. 99.71
PRK09584500 tppB putative tripeptide transporter permease; Rev 99.71
PRK10642490 proline/glycine betaine transporter; Provisional 99.67
TIGR02718390 sider_RhtX_FptX siderophore transporter, RhtX/FptX 99.65
TIGR00806511 rfc RFC reduced folate carrier. Proteins of the RF 99.64
PRK10429473 melibiose:sodium symporter; Provisional 99.62
KOG2504|consensus509 99.62
PRK09669444 putative symporter YagG; Provisional 99.6
TIGR00788468 fbt folate/biopterin transporter. The only functio 99.6
PF11700477 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0 99.55
KOG3764|consensus464 99.54
COG0738422 FucP Fucose permease [Carbohydrate transport and m 99.53
PF03825400 Nuc_H_symport: Nucleoside H+ symporter 99.52
PF13347428 MFS_2: MFS/sugar transport protein 99.52
PRK15462493 dipeptide/tripeptide permease D; Provisional 99.51
PRK09848448 glucuronide transporter; Provisional 99.51
PRK11462460 putative transporter; Provisional 99.42
COG2807395 CynX Cyanate permease [Inorganic ion transport and 99.42
COG2270438 Permeases of the major facilitator superfamily [Ge 99.38
TIGR00880141 2_A_01_02 Multidrug resistance protein. 99.36
COG2211467 MelB Na+/melibiose symporter and related transport 99.33
PF01306412 LacY_symp: LacY proton/sugar symporter; InterPro: 99.29
KOG4686|consensus459 99.21
TIGR01299742 synapt_SV2 synaptic vesicle protein SV2. This mode 99.21
TIGR01272310 gluP glucose/galactose transporter. Disruption of 99.17
KOG2563|consensus480 99.16
COG3104498 PTR2 Dipeptide/tripeptide permease [Amino acid tra 99.05
PRK09528420 lacY galactoside permease; Reviewed 99.04
PRK15011393 sugar efflux transporter B; Provisional 99.02
cd06174352 MFS The Major Facilitator Superfamily (MFS) is a l 98.97
TIGR00893 399 2A0114 d-galactonate transporter. 98.95
TIGR00880141 2_A_01_02 Multidrug resistance protein. 98.93
PRK09556467 uhpT sugar phosphate antiporter; Reviewed 98.93
TIGR00889418 2A0110 nucleoside transporter. This family of prot 98.92
PRK11551406 putative 3-hydroxyphenylpropionic transporter MhpT 98.91
TIGR00887 502 2A0109 phosphate:H+ symporter. This model represen 98.91
PLN00028 476 nitrate transmembrane transporter; Provisional 98.9
TIGR02332 412 HpaX 4-hydroxyphenylacetate permease. This protein 98.9
TIGR00890377 2A0111 Oxalate/Formate Antiporter. 98.89
PRK05122399 major facilitator superfamily transporter; Provisi 98.89
PRK10473 392 multidrug efflux system protein MdtL; Provisional 98.86
TIGR00899375 2A0120 sugar efflux transporter. This family of pr 98.86
PRK10077 479 xylE D-xylose transporter XylE; Provisional 98.86
TIGR00903 368 2A0129 major facilitator 4 family protein. This fa 98.85
TIGR00710 385 efflux_Bcr_CflA drug resistance transporter, Bcr/C 98.85
PRK15403 413 multidrug efflux system protein MdtM; Provisional 98.84
COG2814 394 AraJ Arabinose efflux permease [Carbohydrate trans 98.83
PRK10213 394 nepI ribonucleoside transporter; Reviewed 98.82
TIGR00895 398 2A0115 benzoate transport. 98.82
KOG2325|consensus488 98.81
PRK11663 434 regulatory protein UhpC; Provisional 98.81
TIGR00881 379 2A0104 phosphoglycerate transporter family protein 98.8
PRK10054 395 putative transporter; Provisional 98.8
PRK14995 495 methyl viologen resistance protein SmvA; Provision 98.79
PF03209403 PUCC: PUCC protein; InterPro: IPR004896 This prote 98.79
PRK10091 382 MFS transport protein AraJ; Provisional 98.78
PRK03545 390 putative arabinose transporter; Provisional 98.78
PRK11102 377 bicyclomycin/multidrug efflux system; Provisional 98.77
PRK15402 406 multidrug efflux system translocase MdfA; Provisio 98.77
KOG0254|consensus 513 98.76
PRK09874408 drug efflux system protein MdtG; Provisional 98.75
TIGR00711 485 efflux_EmrB drug resistance transporter, EmrB/QacA 98.75
PRK12382392 putative transporter; Provisional 98.75
PRK09952438 shikimate transporter; Provisional 98.74
TIGR00892455 2A0113 monocarboxylate transporter 1. 98.74
PRK11273 452 glpT sn-glycerol-3-phosphate transporter; Provisio 98.73
TIGR00891 405 2A0112 putative sialic acid transporter. 98.72
PF07690 352 MFS_1: Major Facilitator Superfamily; InterPro: IP 98.72
TIGR00712 438 glpT glycerol-3-phosphate transporter. This model 98.71
TIGR00900 365 2A0121 H+ Antiporter protein. 98.7
TIGR00879 481 SP MFS transporter, sugar porter (SP) family. This 98.7
PRK03893496 putative sialic acid transporter; Provisional 98.69
TIGR00886 366 2A0108 nitrite extrusion protein (nitrite facilita 98.69
TIGR00894 465 2A0114euk Na(+)-dependent inorganic phosphate cotr 98.67
KOG0569|consensus 485 98.66
PF03137539 OATP: Organic Anion Transporter Polypeptide (OATP) 98.63
PRK10489417 enterobactin exporter EntS; Provisional 98.62
TIGR00898505 2A0119 cation transport protein. 98.62
KOG0255|consensus 521 98.62
TIGR00902382 2A0127 phenyl proprionate permease family protein. 98.61
PRK12307 426 putative sialic acid transporter; Provisional 98.6
KOG2532|consensus 466 98.59
PRK11652 394 emrD multidrug resistance protein D; Provisional 98.58
PRK10504 471 putative transporter; Provisional 98.57
TIGR00883394 2A0106 metabolite-proton symporter. This model rep 98.57
PRK03633381 putative MFS family transporter protein; Provision 98.57
PF06609 599 TRI12: Fungal trichothecene efflux pump (TRI12); I 98.57
KOG2816|consensus463 98.55
PRK03699394 putative transporter; Provisional 98.54
PRK11646 400 multidrug resistance protein MdtH; Provisional 98.54
PRK15462 493 dipeptide/tripeptide permease D; Provisional 98.52
KOG3626|consensus735 98.51
PRK15075434 citrate-proton symporter; Provisional 98.5
KOG1330|consensus 493 98.5
PRK09705393 cynX putative cyanate transporter; Provisional 98.49
PRK10406432 alpha-ketoglutarate transporter; Provisional 98.49
PRK15034 462 nitrate/nitrite transport protein NarU; Provisiona 98.47
PF05631354 DUF791: Protein of unknown function (DUF791); Inte 98.46
TIGR00897402 2A0118 polyol permease family. This family of prot 98.45
PRK11043 401 putative transporter; Provisional 98.43
PRK11128382 putative 3-phenylpropionic acid transporter; Provi 98.43
PRK08633 1146 2-acyl-glycerophospho-ethanolamine acyltransferase 98.42
TIGR00792437 gph sugar (Glycoside-Pentoside-Hexuronide) transpo 98.42
PF01770412 Folate_carrier: Reduced folate carrier; InterPro: 98.42
PF11700477 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0 98.42
COG2271 448 UhpC Sugar phosphate permease [Carbohydrate transp 98.41
KOG2615|consensus 451 98.4
PF03092433 BT1: BT1 family; InterPro: IPR004324 Members of th 98.39
PF05977524 MFS_3: Transmembrane secretion effector; InterPro: 98.39
TIGR00885 410 fucP L-fucose:H+ symporter permease. This family d 98.38
TIGR00882396 2A0105 oligosaccharide:H+ symporter. 98.37
PRK11010491 ampG muropeptide transporter; Validated 98.37
COG0477338 ProP Permeases of the major facilitator superfamil 98.36
TIGR00901 356 2A0125 AmpG-related permease. 98.35
PRK06814 1140 acylglycerophosphoethanolamine acyltransferase; Pr 98.33
KOG3764|consensus 464 98.33
PF00083 451 Sugar_tr: Sugar (and other) transporter; InterPro: 98.31
COG2270438 Permeases of the major facilitator superfamily [Ge 98.3
PF06813250 Nodulin-like: Nodulin-like; InterPro: IPR010658 Th 98.28
PRK10207 489 dipeptide/tripeptide permease B; Provisional 98.28
TIGR00924 475 yjdL_sub1_fam amino acid/peptide transporter (Pept 98.28
PRK11902402 ampG muropeptide transporter; Reviewed 98.23
PRK09584 500 tppB putative tripeptide transporter permease; Rev 98.23
TIGR01272310 gluP glucose/galactose transporter. Disruption of 98.2
PRK11195393 lysophospholipid transporter LplT; Provisional 98.19
KOG0253|consensus528 98.17
PRK09848448 glucuronide transporter; Provisional 98.16
KOG3098|consensus461 98.15
TIGR02718390 sider_RhtX_FptX siderophore transporter, RhtX/FptX 98.14
PRK10133438 L-fucose transporter; Provisional 98.13
PTZ00207 591 hypothetical protein; Provisional 98.12
TIGR00788468 fbt folate/biopterin transporter. The only functio 98.1
TIGR00896355 CynX cyanate transporter. This family of proteins 98.06
PRK10429473 melibiose:sodium symporter; Provisional 98.04
PRK09669444 putative symporter YagG; Provisional 98.04
TIGR00805 633 oat sodium-independent organic anion transporter. 98.01
COG2223 417 NarK Nitrate/nitrite transporter [Inorganic ion tr 97.95
KOG2816|consensus 463 97.93
PF13347428 MFS_2: MFS/sugar transport protein 97.93
TIGR00806 511 rfc RFC reduced folate carrier. Proteins of the RF 97.92
KOG2504|consensus509 97.91
TIGR01301 477 GPH_sucrose GPH family sucrose/H+ symporter. This 97.82
COG2211467 MelB Na+/melibiose symporter and related transport 97.81
PF05978156 UNC-93: Ion channel regulatory protein UNC-93; Int 97.67
KOG4332|consensus454 97.65
TIGR00926 654 2A1704 Peptide:H+ symporter (also transports b-lac 97.64
KOG0252|consensus 538 97.64
PF03825400 Nuc_H_symport: Nucleoside H+ symporter 97.62
PRK11462460 putative transporter; Provisional 97.58
KOG3762|consensus618 97.5
PF01306412 LacY_symp: LacY proton/sugar symporter; InterPro: 97.47
PF02487402 CLN3: CLN3 protein; InterPro: IPR003492 Batten's d 97.46
COG0738 422 FucP Fucose permease [Carbohydrate transport and m 97.38
PF0677985 DUF1228: Protein of unknown function (DUF1228); In 97.25
KOG0637|consensus498 97.19
PF1283277 MFS_1_like: MFS_1 like family 97.19
KOG2533|consensus 495 97.11
COG3104 498 PTR2 Dipeptide/tripeptide permease [Amino acid tra 96.95
PF06813250 Nodulin-like: Nodulin-like; InterPro: IPR010658 Th 96.89
KOG4686|consensus459 96.74
KOG2325|consensus 488 96.71
TIGR00939437 2a57 Equilibrative Nucleoside Transporter (ENT). 96.64
COG2807395 CynX Cyanate permease [Inorganic ion transport and 96.59
TIGR00769472 AAA ADP/ATP carrier protein family. These proteins 96.41
KOG1237|consensus571 96.3
PF05631 354 DUF791: Protein of unknown function (DUF791); Inte 96.04
KOG3810|consensus433 95.99
PF03209403 PUCC: PUCC protein; InterPro: IPR004896 This prote 95.96
KOG3762|consensus618 95.66
KOG2563|consensus 480 95.61
TIGR00926 654 2A1704 Peptide:H+ symporter (also transports b-lac 95.38
KOG1479|consensus406 95.29
PF03092 433 BT1: BT1 family; InterPro: IPR004324 Members of th 95.24
PF13000544 Acatn: Acetyl-coenzyme A transporter 1; InterPro: 94.98
TIGR00769 472 AAA ADP/ATP carrier protein family. These proteins 94.35
PF02487402 CLN3: CLN3 protein; InterPro: IPR003492 Batten's d 94.19
PF06963432 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 Thi 94.13
PF00854372 PTR2: POT family; InterPro: IPR000109 This entry r 93.22
COG0477 338 ProP Permeases of the major facilitator superfamil 91.44
PF07672267 MFS_Mycoplasma: Mycoplasma MFS transporter; InterP 91.21
PF03219 491 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 90.86
KOG3098|consensus461 90.78
PF01733309 Nucleoside_tran: Nucleoside transporter; InterPro: 90.0
PF05978156 UNC-93: Ion channel regulatory protein UNC-93; Int 89.72
PF1283277 MFS_1_like: MFS_1 like family 89.37
PRK03612521 spermidine synthase; Provisional 88.67
PF06963432 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 Thi 88.08
TIGR00939 437 2a57 Equilibrative Nucleoside Transporter (ENT). 85.55
PF01770 412 Folate_carrier: Reduced folate carrier; InterPro: 84.38
PF00854 372 PTR2: POT family; InterPro: IPR000109 This entry r 81.75
>KOG0569|consensus Back     alignment and domain information 
Probab=100.00  E-value=1.7e-52  Score=412.50  Aligned_cols=423  Identities=30%  Similarity=0.477  Sum_probs=339.7

Q ss_pred             eeeeccccccccCCCCCcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhh---ccHH
Q psy6142           7 RADTHSRIDANYNEYDDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALA---NGVP   83 (483)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a---~~~~   83 (483)
                      ++..|.+..++|+.-.+...-....+...+++.+|.++|+++.|+++||+|||.+++++.++..+++++..++   ++++
T Consensus        38 ~~f~n~t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e  117 (485)
T KOG0569|consen   38 KSFINETLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFE  117 (485)
T ss_pred             HHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence            3344455555566333333333446667888999999999999999999999999999999988888876664   7899


Q ss_pred             HHHHHHHHhhhcccccccchhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhhh------hhhhHHHHHHhhHHHHHH
Q psy6142          84 MILAGRCVAGFCVGIASLALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGT------FLNWYQLAFFGACIPVPF  157 (483)
Q Consensus        84 ~l~~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~------~~~w~~~~~~~~~~~~~~  157 (483)
                      +++++|++.|+..|......+.|+.|..|++.||.++.+.+++..+|.+++..++.      ...|+..+....++.++.
T Consensus       118 ~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~  197 (485)
T KOG0569|consen  118 MLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQ  197 (485)
T ss_pred             HHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999988865554      346888888878888888


Q ss_pred             HHHHhcCcCChhhhhh-cCCHHHHHHHHHHHhCCCcchhHHHHHHHHHhhccccccccCccchhhhhhhch-hhHHHHHH
Q psy6142         158 LICMFLIPETPRWYIG-RNKQKQARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTGCSEVFKAMY-MRPLLISI  235 (483)
Q Consensus       158 ~~~~~~~pESp~~l~~-~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  235 (483)
                      ++...++|||||||.. |||+|||++.++++++.+++..+..+..++.+++  +.+++...+.+++++++. ++++.+++
T Consensus       198 l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~--~~~~~~~~sl~~~~~~~~lR~~~~i~~  275 (485)
T KOG0569|consen  198 LALLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEE--ELEKKKQISLRQLLKNPTLRRPLLIGI  275 (485)
T ss_pred             HHHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHh--ccccccCCcHHHHhcCcchhHHHHHHH
Confidence            8889999999999988 8999999999999999875443322222221111  122234556788888654 45677888


Q ss_pred             HHHHHHHhhhhHHHHHhhhhccccccccccccccCCCcccccccCCCCCchhhhhhCC-CCchhHHHHHHHHHHHHHHHH
Q psy6142         236 GLMFFQQMSGINAVLASLTVSLGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAGS-TINENYCTIIVGVVNLLSVLI  314 (483)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i  314 (483)
                      .+...||++|.+++....+-                               ..+..|. ..++.+.+...++++++.+++
T Consensus       276 ~v~~~qq~sGi~ai~~Yst~-------------------------------i~~~aG~~~~~a~~an~~~g~v~~~~t~~  324 (485)
T KOG0569|consen  276 VVSFAQQFSGINAIFFYSTS-------------------------------IFKTAGFTPEEAQYANLGIGIVNLLSTLV  324 (485)
T ss_pred             HHHHHHHhcCcceeHHHHHH-------------------------------HHHHcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            88999999998887652211                               1122222 223567899999999999999


Q ss_pred             HHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccccchhhhhhcccCCccch
Q psy6142         315 ATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFGSIPWLMMGEILPAKIR  394 (483)
Q Consensus       315 ~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~Ei~P~~~R  394 (483)
                      +.+++||+|||++++.+..++.++...+...........  ....+..+...+++.+++++|.++++|.+.+|++|++.|
T Consensus       325 ~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~--~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R  402 (485)
T KOG0569|consen  325 SPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFG--SWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSAR  402 (485)
T ss_pred             HHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccch
Confidence            999999999999999999888887776655554332210  112234567788889999999999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHhcCC
Q psy6142         395 GSAASLATAFNWTCTFIVTKTFNDLTALLGTHGAFWLFGVVCLVGLFFVIIFVPETQGKSLEDIERNLTGG  465 (483)
Q Consensus       395 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~f~i~~~~~~i~~i~~~~~lpet~~~~l~ei~~~~~~~  465 (483)
                      +.+++++...+|+..++....++++.+..|. ..|.++.+.+++..+..+.++||||+|+.+||.++++++
T Consensus       403 ~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPETkgr~~~eI~~~~~~~  472 (485)
T KOG0569|consen  403 SAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPETKGRTPYEIIEELEKR  472 (485)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcccCCCCHHHHHHHHHhC
Confidence            9999999999999999999999999999987 578899999999999999999999999999999999987

>KOG0254|consensus Back     alignment and domain information
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters Back     alignment and domain information
>TIGR00887 2A0109 phosphate:H+ symporter Back     alignment and domain information
>KOG0253|consensus Back     alignment and domain information
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2 Back     alignment and domain information
>PRK10077 xylE D-xylose transporter XylE; Provisional Back     alignment and domain information
>TIGR00898 2A0119 cation transport protein Back     alignment and domain information
>KOG0255|consensus Back     alignment and domain information
>KOG0252|consensus Back     alignment and domain information
>TIGR00879 SP MFS transporter, sugar porter (SP) family Back     alignment and domain information
>PRK10642 proline/glycine betaine transporter; Provisional Back     alignment and domain information
>PRK10406 alpha-ketoglutarate transporter; Provisional Back     alignment and domain information
>PRK09952 shikimate transporter; Provisional Back     alignment and domain information
>PRK12307 putative sialic acid transporter; Provisional Back     alignment and domain information
>TIGR02332 HpaX 4-hydroxyphenylacetate permease Back     alignment and domain information
>TIGR00903 2A0129 major facilitator 4 family protein Back     alignment and domain information
>TIGR00891 2A0112 putative sialic acid transporter Back     alignment and domain information
>PRK15075 citrate-proton symporter; Provisional Back     alignment and domain information
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional Back     alignment and domain information
>TIGR00893 2A0114 d-galactonate transporter Back     alignment and domain information
>PRK03545 putative arabinose transporter; Provisional Back     alignment and domain information
>PRK09705 cynX putative cyanate transporter; Provisional Back     alignment and domain information
>PRK11663 regulatory protein UhpC; Provisional Back     alignment and domain information
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK03893 putative sialic acid transporter; Provisional Back     alignment and domain information
>PRK09556 uhpT sugar phosphate antiporter; Reviewed Back     alignment and domain information
>TIGR00890 2A0111 Oxalate/Formate Antiporter Back     alignment and domain information
>PRK10489 enterobactin exporter EntS; Provisional Back     alignment and domain information
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional Back     alignment and domain information
>PRK05122 major facilitator superfamily transporter; Provisional Back     alignment and domain information
>TIGR00895 2A0115 benzoate transport Back     alignment and domain information
>TIGR00883 2A0106 metabolite-proton symporter Back     alignment and domain information
>PRK12382 putative transporter; Provisional Back     alignment and domain information
>TIGR00881 2A0104 phosphoglycerate transporter family protein Back     alignment and domain information
>TIGR00712 glpT glycerol-3-phosphate transporter Back     alignment and domain information
>PRK10091 MFS transport protein AraJ; Provisional Back     alignment and domain information
>PRK15402 multidrug efflux system translocase MdfA; Provisional Back     alignment and domain information
>TIGR00899 2A0120 sugar efflux transporter Back     alignment and domain information
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily Back     alignment and domain information
>PRK14995 methyl viologen resistance protein SmvA; Provisional Back     alignment and domain information
>PLN00028 nitrate transmembrane transporter; Provisional Back     alignment and domain information
>TIGR00900 2A0121 H+ Antiporter protein Back     alignment and domain information
>PRK10504 putative transporter; Provisional Back     alignment and domain information
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily Back     alignment and domain information
>PRK10213 nepI ribonucleoside transporter; Reviewed Back     alignment and domain information
>PRK03699 putative transporter; Provisional Back     alignment and domain information
>PRK10473 multidrug efflux system protein MdtL; Provisional Back     alignment and domain information
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter Back     alignment and domain information
>TIGR00897 2A0118 polyol permease family Back     alignment and domain information
>PRK11195 lysophospholipid transporter LplT; Provisional Back     alignment and domain information
>PRK11102 bicyclomycin/multidrug efflux system; Provisional Back     alignment and domain information
>PRK15403 multidrug efflux system protein MdtM; Provisional Back     alignment and domain information
>PRK03633 putative MFS family transporter protein; Provisional Back     alignment and domain information
>PRK09874 drug efflux system protein MdtG; Provisional Back     alignment and domain information
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms Back     alignment and domain information
>TIGR00892 2A0113 monocarboxylate transporter 1 Back     alignment and domain information
>PRK11043 putative transporter; Provisional Back     alignment and domain information
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>PRK15034 nitrate/nitrite transport protein NarU; Provisional Back     alignment and domain information
>PRK10133 L-fucose transporter; Provisional Back     alignment and domain information
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator) Back     alignment and domain information
>TIGR00889 2A0110 nucleoside transporter Back     alignment and domain information
>PRK11010 ampG muropeptide transporter; Validated Back     alignment and domain information
>TIGR00896 CynX cyanate transporter Back     alignment and domain information
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK10054 putative transporter; Provisional Back     alignment and domain information
>PRK11652 emrD multidrug resistance protein D; Provisional Back     alignment and domain information
>PRK15011 sugar efflux transporter B; Provisional Back     alignment and domain information
>PRK11646 multidrug resistance protein MdtH; Provisional Back     alignment and domain information
>KOG2532|consensus Back     alignment and domain information
>TIGR00885 fucP L-fucose:H+ symporter permease Back     alignment and domain information
>PRK09528 lacY galactoside permease; Reviewed Back     alignment and domain information
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins Back     alignment and domain information
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter Back     alignment and domain information
>PRK11902 ampG muropeptide transporter; Reviewed Back     alignment and domain information
>TIGR00901 2A0125 AmpG-related permease Back     alignment and domain information
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>TIGR00882 2A0105 oligosaccharide:H+ symporter Back     alignment and domain information
>TIGR00902 2A0127 phenyl proprionate permease family protein Back     alignment and domain information
>PRK10207 dipeptide/tripeptide permease B; Provisional Back     alignment and domain information
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial Back     alignment and domain information
>KOG1330|consensus Back     alignment and domain information
>PTZ00207 hypothetical protein; Provisional Back     alignment and domain information
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional Back     alignment and domain information
>KOG2533|consensus Back     alignment and domain information
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter Back     alignment and domain information
>KOG2615|consensus Back     alignment and domain information
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily Back     alignment and domain information
>TIGR00805 oat sodium-independent organic anion transporter Back     alignment and domain information
>PRK09584 tppB putative tripeptide transporter permease; Reviewed Back     alignment and domain information
>PRK10642 proline/glycine betaine transporter; Provisional Back     alignment and domain information
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family Back     alignment and domain information
>TIGR00806 rfc RFC reduced folate carrier Back     alignment and domain information
>PRK10429 melibiose:sodium symporter; Provisional Back     alignment and domain information
>KOG2504|consensus Back     alignment and domain information
>PRK09669 putative symporter YagG; Provisional Back     alignment and domain information
>TIGR00788 fbt folate/biopterin transporter Back     alignment and domain information
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions Back     alignment and domain information
>KOG3764|consensus Back     alignment and domain information
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF03825 Nuc_H_symport: Nucleoside H+ symporter Back     alignment and domain information
>PF13347 MFS_2: MFS/sugar transport protein Back     alignment and domain information
>PRK15462 dipeptide/tripeptide permease D; Provisional Back     alignment and domain information
>PRK09848 glucuronide transporter; Provisional Back     alignment and domain information
>PRK11462 putative transporter; Provisional Back     alignment and domain information
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG2270 Permeases of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>TIGR00880 2_A_01_02 Multidrug resistance protein Back     alignment and domain information
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) [] Back     alignment and domain information
>KOG4686|consensus Back     alignment and domain information
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2 Back     alignment and domain information
>TIGR01272 gluP glucose/galactose transporter Back     alignment and domain information
>KOG2563|consensus Back     alignment and domain information
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism] Back     alignment and domain information
>PRK09528 lacY galactoside permease; Reviewed Back     alignment and domain information
>PRK15011 sugar efflux transporter B; Provisional Back     alignment and domain information
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information
>TIGR00893 2A0114 d-galactonate transporter Back     alignment and domain information
>TIGR00880 2_A_01_02 Multidrug resistance protein Back     alignment and domain information
>PRK09556 uhpT sugar phosphate antiporter; Reviewed Back     alignment and domain information
>TIGR00889 2A0110 nucleoside transporter Back     alignment and domain information
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional Back     alignment and domain information
>TIGR00887 2A0109 phosphate:H+ symporter Back     alignment and domain information
>PLN00028 nitrate transmembrane transporter; Provisional Back     alignment and domain information
>TIGR02332 HpaX 4-hydroxyphenylacetate permease Back     alignment and domain information
>TIGR00890 2A0111 Oxalate/Formate Antiporter Back     alignment and domain information
>PRK05122 major facilitator superfamily transporter; Provisional Back     alignment and domain information
>PRK10473 multidrug efflux system protein MdtL; Provisional Back     alignment and domain information
>TIGR00899 2A0120 sugar efflux transporter Back     alignment and domain information
>PRK10077 xylE D-xylose transporter XylE; Provisional Back     alignment and domain information
>TIGR00903 2A0129 major facilitator 4 family protein Back     alignment and domain information
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily Back     alignment and domain information
>PRK15403 multidrug efflux system protein MdtM; Provisional Back     alignment and domain information
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK10213 nepI ribonucleoside transporter; Reviewed Back     alignment and domain information
>TIGR00895 2A0115 benzoate transport Back     alignment and domain information
>KOG2325|consensus Back     alignment and domain information
>PRK11663 regulatory protein UhpC; Provisional Back     alignment and domain information
>TIGR00881 2A0104 phosphoglycerate transporter family protein Back     alignment and domain information
>PRK10054 putative transporter; Provisional Back     alignment and domain information
>PRK14995 methyl viologen resistance protein SmvA; Provisional Back     alignment and domain information
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon Back     alignment and domain information
>PRK10091 MFS transport protein AraJ; Provisional Back     alignment and domain information
>PRK03545 putative arabinose transporter; Provisional Back     alignment and domain information
>PRK11102 bicyclomycin/multidrug efflux system; Provisional Back     alignment and domain information
>PRK15402 multidrug efflux system translocase MdfA; Provisional Back     alignment and domain information
>KOG0254|consensus Back     alignment and domain information
>PRK09874 drug efflux system protein MdtG; Provisional Back     alignment and domain information
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily Back     alignment and domain information
>PRK12382 putative transporter; Provisional Back     alignment and domain information
>PRK09952 shikimate transporter; Provisional Back     alignment and domain information
>TIGR00892 2A0113 monocarboxylate transporter 1 Back     alignment and domain information
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional Back     alignment and domain information
>TIGR00891 2A0112 putative sialic acid transporter Back     alignment and domain information
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms Back     alignment and domain information
>TIGR00712 glpT glycerol-3-phosphate transporter Back     alignment and domain information
>TIGR00900 2A0121 H+ Antiporter protein Back     alignment and domain information
>TIGR00879 SP MFS transporter, sugar porter (SP) family Back     alignment and domain information
>PRK03893 putative sialic acid transporter; Provisional Back     alignment and domain information
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator) Back     alignment and domain information
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter Back     alignment and domain information
>KOG0569|consensus Back     alignment and domain information
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs) Back     alignment and domain information
>PRK10489 enterobactin exporter EntS; Provisional Back     alignment and domain information
>TIGR00898 2A0119 cation transport protein Back     alignment and domain information
>KOG0255|consensus Back     alignment and domain information
>TIGR00902 2A0127 phenyl proprionate permease family protein Back     alignment and domain information
>PRK12307 putative sialic acid transporter; Provisional Back     alignment and domain information
>KOG2532|consensus Back     alignment and domain information
>PRK11652 emrD multidrug resistance protein D; Provisional Back     alignment and domain information
>PRK10504 putative transporter; Provisional Back     alignment and domain information
>TIGR00883 2A0106 metabolite-proton symporter Back     alignment and domain information
>PRK03633 putative MFS family transporter protein; Provisional Back     alignment and domain information
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins Back     alignment and domain information
>KOG2816|consensus Back     alignment and domain information
>PRK03699 putative transporter; Provisional Back     alignment and domain information
>PRK11646 multidrug resistance protein MdtH; Provisional Back     alignment and domain information
>PRK15462 dipeptide/tripeptide permease D; Provisional Back     alignment and domain information
>KOG3626|consensus Back     alignment and domain information
>PRK15075 citrate-proton symporter; Provisional Back     alignment and domain information
>KOG1330|consensus Back     alignment and domain information
>PRK09705 cynX putative cyanate transporter; Provisional Back     alignment and domain information
>PRK10406 alpha-ketoglutarate transporter; Provisional Back     alignment and domain information
>PRK15034 nitrate/nitrite transport protein NarU; Provisional Back     alignment and domain information
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function Back     alignment and domain information
>TIGR00897 2A0118 polyol permease family Back     alignment and domain information
>PRK11043 putative transporter; Provisional Back     alignment and domain information
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional Back     alignment and domain information
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter Back     alignment and domain information
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX) Back     alignment and domain information
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions Back     alignment and domain information
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG2615|consensus Back     alignment and domain information
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins Back     alignment and domain information
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily Back     alignment and domain information
>TIGR00885 fucP L-fucose:H+ symporter permease Back     alignment and domain information
>TIGR00882 2A0105 oligosaccharide:H+ symporter Back     alignment and domain information
>PRK11010 ampG muropeptide transporter; Validated Back     alignment and domain information
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only] Back     alignment and domain information
>TIGR00901 2A0125 AmpG-related permease Back     alignment and domain information
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>KOG3764|consensus Back     alignment and domain information
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters Back     alignment and domain information
>COG2270 Permeases of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins Back     alignment and domain information
>PRK10207 dipeptide/tripeptide permease B; Provisional Back     alignment and domain information
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial Back     alignment and domain information
>PRK11902 ampG muropeptide transporter; Reviewed Back     alignment and domain information
>PRK09584 tppB putative tripeptide transporter permease; Reviewed Back     alignment and domain information
>TIGR01272 gluP glucose/galactose transporter Back     alignment and domain information
>PRK11195 lysophospholipid transporter LplT; Provisional Back     alignment and domain information
>KOG0253|consensus Back     alignment and domain information
>PRK09848 glucuronide transporter; Provisional Back     alignment and domain information
>KOG3098|consensus Back     alignment and domain information
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family Back     alignment and domain information
>PRK10133 L-fucose transporter; Provisional Back     alignment and domain information
>PTZ00207 hypothetical protein; Provisional Back     alignment and domain information
>TIGR00788 fbt folate/biopterin transporter Back     alignment and domain information
>TIGR00896 CynX cyanate transporter Back     alignment and domain information
>PRK10429 melibiose:sodium symporter; Provisional Back     alignment and domain information
>PRK09669 putative symporter YagG; Provisional Back     alignment and domain information
>TIGR00805 oat sodium-independent organic anion transporter Back     alignment and domain information
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG2816|consensus Back     alignment and domain information
>PF13347 MFS_2: MFS/sugar transport protein Back     alignment and domain information
>TIGR00806 rfc RFC reduced folate carrier Back     alignment and domain information
>KOG2504|consensus Back     alignment and domain information
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter Back     alignment and domain information
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans Back     alignment and domain information
>KOG4332|consensus Back     alignment and domain information
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors) Back     alignment and domain information
>KOG0252|consensus Back     alignment and domain information
>PF03825 Nuc_H_symport: Nucleoside H+ symporter Back     alignment and domain information
>PRK11462 putative transporter; Provisional Back     alignment and domain information
>KOG3762|consensus Back     alignment and domain information
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) [] Back     alignment and domain information
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age Back     alignment and domain information
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters Back     alignment and domain information
>KOG0637|consensus Back     alignment and domain information
>PF12832 MFS_1_like: MFS_1 like family Back     alignment and domain information
>KOG2533|consensus Back     alignment and domain information
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism] Back     alignment and domain information
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins Back     alignment and domain information
>KOG4686|consensus Back     alignment and domain information
>KOG2325|consensus Back     alignment and domain information
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT) Back     alignment and domain information
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00769 AAA ADP/ATP carrier protein family Back     alignment and domain information
>KOG1237|consensus Back     alignment and domain information
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function Back     alignment and domain information
>KOG3810|consensus Back     alignment and domain information
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon Back     alignment and domain information
>KOG3762|consensus Back     alignment and domain information
>KOG2563|consensus Back     alignment and domain information
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors) Back     alignment and domain information
>KOG1479|consensus Back     alignment and domain information
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins Back     alignment and domain information
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ] Back     alignment and domain information
>TIGR00769 AAA ADP/ATP carrier protein family Back     alignment and domain information
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age Back     alignment and domain information
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1 Back     alignment and domain information
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters Back     alignment and domain information
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only] Back     alignment and domain information
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS) Back     alignment and domain information
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions Back     alignment and domain information
>KOG3098|consensus Back     alignment and domain information
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs Back     alignment and domain information
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans Back     alignment and domain information
>PF12832 MFS_1_like: MFS_1 like family Back     alignment and domain information
>PRK03612 spermidine synthase; Provisional Back     alignment and domain information
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1 Back     alignment and domain information
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT) Back     alignment and domain information
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX) Back     alignment and domain information
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query483
4gby_A491 The Structure Of The Mfs (Major Facilitator Superfa 1e-31
>pdb|4GBY|A Chain A, The Structure Of The Mfs (Major Facilitator Superfamily) Proton:xylose Symporter Xyle Bound To D-Xylose Length = 491 Back     alignment and structure 
Iteration: 1

 Score =  134 bits (336), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 126/456 (27%), Positives = 199/456 (43%), Gaps = 82/456 (17%)
Query: 40  LSALFGGMAGGPLIESLGRRTTILSTGLPFIVS----------FLLIALANGVPMILAG- 88
           +  + GG  GG      GRR ++    + F +S          F  I   N VP+ LAG 
Sbjct: 66  IGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGY 125
Query: 89  -------RCVAGFCVGIASLALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGTFL 141
                  R + G  VG+AS+  P+Y+ E     +RG L     F    G L  +    F+
Sbjct: 126 VPEFVIYRIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFI 185
Query: 142 ------NW-----YQLAFFGACIP-VPFLICMFLIPETPRWYIGRNKQKQARKALQWLRG 189
                 +W     ++  F   CIP + FL+ ++ +PE+PRW + R KQ+QA   L+ + G
Sbjct: 186 ARSGDASWLNTDGWRYMFASECIPALLFLMLLYTVPESPRWLMSRGKQEQAEGILRKIMG 245
Query: 190 KDADISREFAEIEKMNNEGNAAEDENSTGCSEVFKAMYMRPLLISIGLMFFQQMSGINAV 249
            +   ++   EI+   + G       + G   +F    +  ++I + L  FQQ  GIN V
Sbjct: 246 -NTLATQAVQEIKHSLDHG-----RKTGGRLLMFG---VGVIVIGVMLSIFQQFVGINVV 296
Query: 250 LASLTVSLGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAGSTINENYCTIIVGVVNL 309
           L                 Y +P +     +G+           ST      TIIVGV+NL
Sbjct: 297 L-----------------YYAPEV--FKTLGA-----------STDIALLQTIIVGVINL 326
Query: 310 LSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVY 369
              ++A   +D+ GRK L  I +  M + + +LGT FY ++ G        + LLS + Y
Sbjct: 327 TFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGI-------VALLSMLFY 379
Query: 370 VIGFSIGFGSIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTF--NDLTALLGTHG 427
           V  F++ +G + W+++ EI P  IRG A ++A A  W   + V+ TF   D  + L  H 
Sbjct: 380 VAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHF 439
Query: 428 ----AXXXXXXXXXXXXXXXXXXXPETQGKSLEDIE 459
               +                   PET+GK+LE++E
Sbjct: 440 HNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEELE 475

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query483
1pw4_A451 Glycerol-3-phosphate transporter; transmembrane, i 3e-04
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Length = 451 Back     alignment and structure
 Score = 42.0 bits (99), Expect = 3e-04
 Identities = 24/154 (15%), Positives = 48/154 (31%), Gaps = 14/154 (9%)

Query: 29  IQASWIGSLMPLSALFGGMAGGPLIESLGRRT-----TILSTGLPFIVSFLLIALANGVP 83
            ++SW   L   + + G +  G + + + R           T +        +  A    
Sbjct: 288 DKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPT 347

Query: 84  MILAGRCVAGFCVGIASLALPVYLGETVQPEVRGTLGLLPTFLGNIG------ILTCFIA 137
           + +    V GF +    + + ++  E    +  GT        G +G       +  +  
Sbjct: 348 VDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTV 407

Query: 138 GTFLNWYQLAFF--GACIPVPFLICMFLIPETPR 169
             F  W        G  I    L+ + +I E  R
Sbjct: 408 DFF-GWDGGFMVMIGGSILAVILLIVVMIGEKRR 440

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query483
4gc0_A491 D-xylose-proton symporter; MFS, transport protein; 100.0
1pw4_A451 Glycerol-3-phosphate transporter; transmembrane, i 99.96
3o7q_A438 L-fucose-proton symporter; transporter, multi-PASS 99.95
4aps_A491 DI-OR tripeptide H+ symporter; transport protein, 99.94
2gfp_A375 EMRD, multidrug resistance protein D; membrane pro 99.88
2xut_A524 Proton/peptide symporter family protein; transport 99.87
2cfq_A417 Lactose permease; transport, transport mechanism, 99.85
1pw4_A 451 Glycerol-3-phosphate transporter; transmembrane, i 99.03
2cfq_A417 Lactose permease; transport, transport mechanism, 98.83
3o7q_A 438 L-fucose-proton symporter; transporter, multi-PASS 98.78
2gfp_A 375 EMRD, multidrug resistance protein D; membrane pro 98.69
4gc0_A491 D-xylose-proton symporter; MFS, transport protein; 98.68
4aps_A 491 DI-OR tripeptide H+ symporter; transport protein, 98.64
2xut_A 524 Proton/peptide symporter family protein; transport 98.56
>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A* Back     alignment and structure
Probab=100.00  E-value=4.6e-49  Score=403.87  Aligned_cols=408  Identities=28%  Similarity=0.480  Sum_probs=306.8

Q ss_pred             cccccccCCCCC--cccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHH------------
Q psy6142          12 SRIDANYNEYDD--VKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIA------------   77 (483)
Q Consensus        12 ~~~~~~~~~~~~--~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~------------   77 (483)
                      |.++.+|+..++  .+.+..+.+|+.+++.+|.++|++++|+++||+|||++++++.+++.+++++++            
T Consensus        36 ~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~G~~iG~~~~G~laDr~GRk~~l~~~~~l~~i~~i~~a~~~~~~~~~~~~  115 (491)
T 4gc0_A           36 ESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPD  115 (491)
T ss_dssp             HHHHHHHTGGGCCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHCTTTTTSCSSSS
T ss_pred             HHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcch
Confidence            445555543333  234556788999999999999999999999999999999999999999999999            


Q ss_pred             ------hhccHHHHHHHHHHhhhcccccccchhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhhhh-----------
Q psy6142          78 ------LANGVPMILAGRCVAGFCVGIASLALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGTF-----------  140 (483)
Q Consensus        78 ------~a~~~~~l~~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~~-----------  140 (483)
                            +++|+++++++|+++|++.|+..+..++|++|..|+++||+..+..+.+...|.+.+...+..           
T Consensus       116 ~~~~~~~a~~~~~l~~~R~l~G~g~G~~~~~~~~~i~E~~p~~~rg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  195 (491)
T 4gc0_A          116 NTVPVYLAGYVPEFVIYRIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLN  195 (491)
T ss_dssp             SSCCGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTT
T ss_pred             hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHhhhhhHHhhhhhhhhhhhhhhhcchhhcccccccccc
Confidence                  488999999999999999999999999999999999999999999999999998877766543           


Q ss_pred             -hhhHHHHHHhhHHHHHHHHHHhcCcCChhhhhhcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHhhccccccccCccch
Q psy6142         141 -LNWYQLAFFGACIPVPFLICMFLIPETPRWYIGRNKQKQARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTGC  219 (483)
Q Consensus       141 -~~w~~~~~~~~~~~~~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (483)
                       ..||..+.....+.++.++..+++||||||+..|++.|++++.+++.++.+...++..+..+...++      +.... 
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~peSp~~L~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~------~~~~~-  268 (491)
T 4gc0_A          196 TDGWRYMFASECIPALLFLMLLYTVPESPRWLMSRGKQEQAEGILRKIMGNTLATQAVQEIKHSLDHG------RKTGG-  268 (491)
T ss_dssp             TTHHHHHHHTTHHHHHHHHHHGGGSCCCHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHTT-
T ss_pred             chhhHHHhhhhhhhhhhhhhhhhcCCCChHHHHHcCchhHHHHhHHHhcCCchhHHHHHHHHHHHHhh------hhhhh-
Confidence             2356666666666677777788899999999999999999999987765432222111111111000      00001 


Q ss_pred             hhhhhhchhhHHHHHHHHHHHHHhhhhHHHHHhhhhccccccccccccccCCCcccccccCCCCCchhhhhhC-CCCchh
Q psy6142         220 SEVFKAMYMRPLLISIGLMFFQQMSGINAVLASLTVSLGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAG-STINEN  298 (483)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~  298 (483)
                        .......++.........+++..+.+.+........                               +..+ ...+..
T Consensus       269 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------~~~~~~~~~~~  315 (491)
T 4gc0_A          269 --RLLMFGVGVIVIGVMLSIFQQFVGINVVLYYAPEVF-------------------------------KTLGASTDIAL  315 (491)
T ss_dssp             --HHHHSCCTHHHHHHHHHHHHHHTCHHHHHHHHHHHH-------------------------------HHSSCCHHHHH
T ss_pred             --HHHHhcccHHHHHHHHHHHHHHhhhhHHHhcchHHH-------------------------------HhcCCCccchh
Confidence              111123455666677777788877766654221110                               1111 111234


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhcccc
Q psy6142         299 YCTIIVGVVNLLSVLIATALIDRLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGFG  378 (483)
Q Consensus       299 ~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~  378 (483)
                      ....+.+++.+++++++++++||+|||+.++.+...+.++++.++.......       ..+...+...++..+++.+.+
T Consensus       316 ~~~~~~~~~~~~~~~~~~~l~dr~Grr~~~~~~~~~~~~~~~~l~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~  388 (491)
T 4gc0_A          316 LQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQA-------PGIVALLSMLFYVAAFAMSWG  388 (491)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHTTC-------CHHHHHHHHHHHHHHHHTTTT
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhcCcchhccchHHHHHHHHHHHHHHhccc-------chHHHHHHHHHHHHHHHhHHH
Confidence            5567788999999999999999999999999888877777666554443221       234455556666777888888


Q ss_pred             chhhhhhcccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH------HhCcchhHHHHHHHHHHHHHHhhhhcccCCC
Q psy6142         379 SIPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTFNDLTA------LLGTHGAFWLFGVVCLVGLFFVIIFVPETQG  452 (483)
Q Consensus       379 ~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~~~~~~~~~~~~~------~~g~~~~f~i~~~~~~i~~i~~~~~lpet~~  452 (483)
                      ++++.+.+|++|+++|+++.|++..++++++++.+..++.+.+      ..+...+|++++++++++.+++++++||||+
T Consensus       389 ~~~~~~~~E~fPt~~R~~~~g~~~~~~~~~~~i~~~~~p~l~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~PETkg  468 (491)
T 4gc0_A          389 PVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKG  468 (491)
T ss_dssp             HHHHHHHHHSSCTTTHHHHHHHHHHHHHHHHHHHHTHHHHHCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHCCCCTT
T ss_pred             HHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHheecCCCC
Confidence            9999999999999999999999999999999998887765432      2355667899999999998888899999999


Q ss_pred             CCHHHHHHHhcCCC
Q psy6142         453 KSLEDIERNLTGGG  466 (483)
Q Consensus       453 ~~l~ei~~~~~~~~  466 (483)
                      |++||+|+.++++.
T Consensus       469 ~tLeei~~~f~~~~  482 (491)
T 4gc0_A          469 KTLEELEALWEPET  482 (491)
T ss_dssp             CCHHHHGGGTC---
T ss_pred             CCHHHHHHHhCCCC
Confidence            99999999998754
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Back     alignment and structure
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A* Back     alignment and structure
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus} Back     alignment and structure
>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli} Back     alignment and structure
>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis} Back     alignment and structure
>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A* Back     alignment and structure
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Back     alignment and structure
>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A* Back     alignment and structure
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A* Back     alignment and structure
>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli} Back     alignment and structure
>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A* Back     alignment and structure
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus} Back     alignment and structure
>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 483
d1pw4a_447 f.38.1.1 (A:) Glycerol-3-phosphate transporter {Es 6e-12
d1pv7a_417 f.38.1.2 (A:) Lactose permease {Escherichia coli [ 0.002
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Length = 447 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

 Score = 65.1 bits (157), Expect = 6e-12
 Identities = 47/441 (10%), Positives = 120/441 (27%), Gaps = 68/441 (15%)

Query: 30  QASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLI----ALANGVPMI 85
              +  S + ++  F     G + +    R  + +  +      L +       + + ++
Sbjct: 60  DLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVM 119

Query: 86  LAGRCVAGFCVGIASLALPVYLGETVQPEVRGTLGLLPTFLGNIG-----ILTCFIAGTF 140
                + G+  G+        +      + RG +  +     N+G     +L       F
Sbjct: 120 FVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWF 179

Query: 141 LNWYQLAFFGACIPVPFLICMFLIPETPRWYIGRNKQKQARKALQWLRGKDADISREFAE 200
            +W+   +  A   +   +  F +        G    ++ +        + A+      +
Sbjct: 180 NDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQ 239

Query: 201 IEKMNNEGNAAEDENSTGCSEVFKAMYMRPLLISIGLMFFQQMSGINAVLASLTVSLGSM 260
           I                      + +    LL  I +           +L          
Sbjct: 240 I--------------------FMQYVLPNKLLWYIAIANVFVYLLRYGILDWS------- 272

Query: 261 IVGFASAYTSPAIPSMNQMGSRVSPTEEEDAGSTINENYCTIIVGVVNLLSVLIATALID 320
                        P+  +     +  +          ++   +     +   L+   + D
Sbjct: 273 -------------PTYLKEVKHFALDK---------SSWAYFLYEYAGIPGTLLCGWMSD 310

Query: 321 RLGRKILLYISSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSI-GFGS 379
           ++ R          M L       ++   +            +    + VIGF I G   
Sbjct: 311 KVFRGNRGATGVFFMTLVTIATIVYWMNPAG--------NPTVDMICMIVIGFLIYGPVM 362

Query: 380 IPWLMMGEILPAKIRGSAASLATAFNWTCTFIVTKTF-NDLTALLGTHGAFWLFGVVCLV 438
           +  L   E+ P K  G+AA     F +    +             G  G F +     ++
Sbjct: 363 LIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSIL 422

Query: 439 GLFFVIIFVPETQGKSLEDIE 459
            +  +I+ +   + +  + ++
Sbjct: 423 AVILLIVVMIGEKRRHEQLLQ 443
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Length = 417 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query483
d1pw4a_447 Glycerol-3-phosphate transporter {Escherichia coli 99.96
d1pv7a_417 Lactose permease {Escherichia coli [TaxId: 562]} 99.89
d1pw4a_ 447 Glycerol-3-phosphate transporter {Escherichia coli 99.08
d1pv7a_417 Lactose permease {Escherichia coli [TaxId: 562]} 98.93
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=3.6e-28  Score=242.36  Aligned_cols=369  Identities=13%  Similarity=0.124  Sum_probs=225.0

Q ss_pred             CCcccccchhhHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHHHHhh----ccHHHHHHHHHHhhhccc
Q psy6142          22 DDVKINYIQASWIGSLMPLSALFGGMAGGPLIESLGRRTTILSTGLPFIVSFLLIALA----NGVPMILAGRCVAGFCVG   97 (483)
Q Consensus        22 ~~~~~~~~~~~~~~s~~~~g~~lG~~~~G~l~D~~GRr~~l~~~~~l~~~~~~l~~~a----~~~~~l~~~R~l~G~~~g   97 (483)
                      +|.+.+..|.+|+.+++.++..++++++|+++||+|||+++..+.++..++.++++++    ++++.++++|+++|++.|
T Consensus        52 ~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  131 (447)
T d1pw4a_          52 VEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQG  131 (447)
T ss_dssp             TSSTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCHHHHSSSSHHHHHHHHHHHHHH
T ss_pred             HHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHHHhhh
Confidence            4567899999999999999999999999999999999999999999999999998886    478899999999999999


Q ss_pred             ccccchhhhhcccCCCCccchhchHhHHHHHHHHHHHHHhhh-----hhhhHHHHHHhhHHHHHH-HHHHhcCcCChhhh
Q psy6142          98 IASLALPVYLGETVQPEVRGTLGLLPTFLGNIGILTCFIAGT-----FLNWYQLAFFGACIPVPF-LICMFLIPETPRWY  171 (483)
Q Consensus        98 ~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~g~~~~~~~g~-----~~~w~~~~~~~~~~~~~~-~~~~~~~pESp~~l  171 (483)
                      ...+....++.|..|+++|++..++.+.+..+|..+++..+.     ..+||..+++...+.++. ++...+.+|.|+..
T Consensus       132 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (447)
T d1pw4a_         132 MGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSC  211 (447)
T ss_dssp             HTHHHHHHHHHTTCTTTHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTCCSTTCTHHHHHHHHHHHHHHHHHCCCSSTTT
T ss_pred             hhhhHHHHHHHHHHHhhcccccccccccccchhhhhhhhhhhhHhhhhhcccccchhhhhhHHHHHHHHHHhcccchhhc
Confidence            999999999999999999999998888888887655443332     336777766655554433 44456677777653


Q ss_pred             hhcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHhhccccccccCccchhhhhhhchhhHHHHHHHH-HHHHHhhhhHHHH
Q psy6142         172 IGRNKQKQARKALQWLRGKDADISREFAEIEKMNNEGNAAEDENSTGCSEVFKAMYMRPLLISIGL-MFFQQMSGINAVL  250 (483)
Q Consensus       172 ~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  250 (483)
                      ....++++.+           +..++..      ++.+++........+..++    ++....... .++..... ....
T Consensus       212 ~~~~~~~~~~-----------~~~~~~~------~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~-~~~~  269 (447)
T d1pw4a_         212 GLPPIEEYKN-----------DYPDDYN------EKAEQELTAKQIFMQYVLP----NKLLWYIAIANVFVYLLR-YGIL  269 (447)
T ss_dssp             CCCSCTTTCC-----------C-------------------CCTHHHHHHTSS----CHHHHHHHHHHHHHHHHH-HHHH
T ss_pred             ccchhhhhhh-----------hcccchh------hccccccchhhHHHHHHHc----CchHHHHHHHhhhhhhhh-hcch
Confidence            2222111100           0000000      0000000000001111222    122211111 11111100 0000


Q ss_pred             HhhhhccccccccccccccCCCcccccccCCCCCchhhhhhCCCCchhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHH
Q psy6142         251 ASLTVSLGSMIVGFASAYTSPAIPSMNQMGSRVSPTEEEDAGSTINENYCTIIVGVVNLLSVLIATALIDRLGRKILLYI  330 (483)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~lvdr~GRr~~l~~  330 (483)
                      .                +    .|.+.+...         ..+..+..+......++.+++.++.+++.||++||+....
T Consensus       270 ~----------------~----~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  320 (447)
T d1pw4a_         270 D----------------W----SPTYLKEVK---------HFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGAT  320 (447)
T ss_dssp             H----------------H----HHHHBTTBS---------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCHHHH
T ss_pred             h----------------h----hhhhccccc---------ccccchhhhhhhcchhhhhhhhhhhhhhhhhccccccccc
Confidence            0                0    000000000         0011123456677788889999999999999998875544


Q ss_pred             HhHHHHHHHHHHHHHHhhccCCCCccccchHHHHHHHHHHHHHhccc-cchhhhhhcccCCccchhhhhHHHHHHHHHHH
Q psy6142         331 SSTAMILTLATLGTFFYFKSTGSDVSELGWLPLLSFVVYVIGFSIGF-GSIPWLMMGEILPAKIRGSAASLATAFNWTCT  409 (483)
Q Consensus       331 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~-~~~~~~~~~Ei~P~~~R~~~~s~~~~~~~~~~  409 (483)
                      ......+....+.  ......    ....+...+..  +..+++.+. .+..+.+..|.+|++.|+++.|+.+.++++++
T Consensus       321 ~~~~~~~~~~~~~--~~~~~~----~~~~~~~~~~~--~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~g  392 (447)
T d1pw4a_         321 GVFFMTLVTIATI--VYWMNP----AGNPTVDMICM--IVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGG  392 (447)
T ss_dssp             HHHHHHHHHHHHH--HTTSCC----TTCHHHHHHHH--HHHHHHHTHHHHHHHHHHHHTSCTTHHHHHHHHHHHHHHHHH
T ss_pred             cchhHHHHHHHHH--HHHhcc----cccHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH
Confidence            4333332222221  111111    11122222222  233443332 34556788899999999999999988887755


Q ss_pred             HH-HHHHHHHHHHHhCcchhHHHHHHHHHHHHHHhhhhccc
Q psy6142         410 FI-VTKTFNDLTALLGTHGAFWLFGVVCLVGLFFVIIFVPE  449 (483)
Q Consensus       410 ~~-~~~~~~~~~~~~g~~~~f~i~~~~~~i~~i~~~~~lpe  449 (483)
                      .+ .+...+.+.+..|++..|++.+++++++.++.+++.++
T Consensus       393 ~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  433 (447)
T d1pw4a_         393 SVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIG  433 (447)
T ss_dssp             HHHHHHHHHHHHHSSCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            44 56667778888888888888777777766655544433
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Back     information, alignment and structure