Score = 69.7 bits (169), Expect = 6e-12, Method: Composition-based stats.
Identities = 35/76 (46%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Query: 11 RLKVEQAGGAWCPKNPVE-KDIREFIQIDLGSPHVVTGVQTQGRYDHGRGQEYTEEYILE 69
RL E+ GAWCP+ PVE D++EF+QIDL + H +T V TQGR+ G G E+ Y +
Sbjct: 62 RLDSEEGDGAWCPEIPVEPDDLKEFLQIDLHTLHFITLVGTQGRHAGGHGIEFAPMYKIN 121
Query: 70 YWRPGLR--DWKQYYG 83
Y R G R W+ +G
Sbjct: 122 YSRDGTRWISWRNRHG 137
Tyrosine kinase that functions as cell surface receptor for fibrillar collagen and regulates cell differentiation, remodeling of the extracellular matrix, cell migration and cell proliferation. Required for normal bone development. Regulates osteoblast differentiation and chondrocyte maturation via a signaling pathway that involves MAP kinases and leads to the activation of the transcription factor RUNX2. Regulates remodeling of the extracellular matrix by up-regulation of the collagenases MMP1, MMP2 and MMP13, and thereby facilitates cell migration and tumor cell invasion. Promotes fibroblast migration and proliferation, and thereby contributes to cutaneous wound healing. Homo sapiens (taxid: 9606) EC: 2EC: .EC: 7EC: .EC: 1EC: 0EC: .EC: 1
Score = 67.4 bits (163), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/76 (44%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Query: 11 RLKVEQAGGAWCPKNPVE-KDIREFIQIDLGSPHVVTGVQTQGRYDHGRGQEYTEEYILE 69
RL E+ GAWCP+ PV+ D++EF+QIDL + H +T V TQGR+ G G E+ Y +
Sbjct: 62 RLDSEEGDGAWCPEIPVQPDDLKEFLQIDLRTLHFITLVGTQGRHAGGHGIEFAPMYKIN 121
Query: 70 YWRPGLR--DWKQYYG 83
Y R G R W+ +G
Sbjct: 122 YSRDGSRWISWRNRHG 137
Tyrosine kinase that functions as cell surface receptor for fibrillar collagen and regulates cell differentiation, remodeling of the extracellular matrix, cell migration and cell proliferation. Required for normal bone development. Regulates osteoblast differentiation and chondrocyte maturation via a signaling pathway that involves MAP kinases and leads to the activation of the transcription factor RUNX2. Regulates remodeling of the extracellular matrix by up-regulation of the collagenases MMP1, MMP2 and MMP13, and thereby facilitates cell migration and tumor cell invasion. Promotes fibroblast migration and proliferation, and thereby contributes to cutaneous wound healing.
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 11 RLKVEQAGGAWCPKNPVEKDIREFIQIDLGSPHVVTGVQTQGRYDHGRGQEYTEEYILEY 70
RL+ GAWCP PV E++Q+DL H+V V TQGR+ G G+E++ Y L Y
Sbjct: 64 RLESSDGDGAWCPAGPVFPKEEEYLQVDLRRLHLVALVGTQGRHAGGLGKEFSRSYRLRY 123
Query: 71 WRPGLR--DWKQYYG 83
R G R DWK +G
Sbjct: 124 SRDGRRWMDWKDRWG 138
Tyrosine kinase that functions as cell surface receptor for fibrillar collagen and regulates cell attachment to the extracellular matrix, remodeling of the extracellular matrix, cell migration, differentiation, survival and cell proliferation. Collagen binding triggers a signaling pathway that involves SRC and leads to the activation of MAP kinases. Regulates remodeling of the extracellular matrix by up-regulation of the matrix metalloproteinases MMP2, MMP7 and MMP9, and thereby facilitates cell migration and wound healing. Promotes smooth muscle cell migration, and thereby contributes to arterial wound healing. Also plays a role in tumor cell invasion. Phosphorylates PTPN11. Required for normal blastocyst implantation during pregnancy, for normal mammary gland differentiation and normal lactation. Required for normal ear morphology and normal hearing.
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 11 RLKVEQAGGAWCPKNPVEKDIREFIQIDLGSPHVVTGVQTQGRYDHGRGQEYTEEYILEY 70
RL+ GAWCP PV E++Q+DL H+V V TQGR+ G G+E++ Y L Y
Sbjct: 64 RLESSDGDGAWCPAGPVFPKEEEYLQVDLRRLHLVALVGTQGRHAGGLGKEFSRSYRLRY 123
Query: 71 WRPGLR--DWKQYYG 83
R G R DWK +G
Sbjct: 124 SRDGRRWMDWKDRWG 138
Tyrosine kinase that functions as cell surface receptor for fibrillar collagen and regulates cell attachment to the extracellular matrix, remodeling of the extracellular matrix, cell migration, differentiation, survival and cell proliferation. Collagen binding triggers a signaling pathway that involves SRC and leads to the activation of MAP kinases. Regulates remodeling of the extracellular matrix by up-regulation of the matrix metalloproteinases MMP2, MMP7 and MMP9, and thereby facilitates cell migration and wound healing, but also tumor cell invasion. Promotes smooth muscle cell migration, and thereby contributes to arterial wound healing. Phosphorylates PTPN11 (By similarity). Required for normal blastocyst implantation during pregnancy, for normal mammary gland differentiation and normal lactation. Required for normal ear morphology and normal hearing.
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 11 RLKVEQAGGAWCPKNPVEKDIREFIQIDLGSPHVVTGVQTQGRYDHGRGQEYTEEYILEY 70
RL+ GAWCP V E++Q+DL H+V V TQGR+ G G+E++ Y L Y
Sbjct: 63 RLESSDGDGAWCPAGSVFPKEEEYLQVDLQRLHLVALVGTQGRHAGGLGKEFSRSYRLRY 122
Query: 71 WRPGLR--DWKQYYG 83
R G R WK +G
Sbjct: 123 SRDGRRWMGWKDRWG 137
Tyrosine kinase that functions as cell surface receptor for fibrillar collagen and regulates cell attachment to the extracellular matrix, remodeling of the extracellular matrix, cell migration, differentiation, survival and cell proliferation. Collagen binding triggers a signaling pathway that involves SRC and leads to the activation of MAP kinases. Regulates remodeling of the extracellular matrix by up-regulation of the matrix metalloproteinases MMP2, MMP7 and MMP9, and thereby facilitates cell migration and wound healing. Required for normal blastocyst implantation during pregnancy, for normal mammary gland differentiation and normal lactation. Required for normal ear morphology and normal hearing (By similarity). Promotes smooth muscle cell migration, and thereby contributes to arterial wound healing. Also plays a role in tumor cell invasion. Phosphorylates PTPN11.
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 19 GAWCPKNPVEKDIREFIQIDLGSPHVVTGVQTQGRYDHGRGQEYTEEYILEYWRPGLR-- 76
GAWCP V E++Q+DL H+V V TQGR+ G G+E++ Y L Y R G R
Sbjct: 67 GAWCPAGSVFPKEEEYLQVDLQRLHLVALVGTQGRHAGGLGKEFSRSYRLRYSRDGRRWM 126
Query: 77 DWKQYYG 83
WK +G
Sbjct: 127 GWKDRWG 133
Tyrosine kinase that functions as cell surface receptor for fibrillar collagen and regulates cell attachment to the extracellular matrix, remodeling of the extracellular matrix, cell migration, differentiation, survival and cell proliferation. Collagen binding triggers a signaling pathway that involves SRC and leads to the activation of MAP kinases. Regulates remodeling of the extracellular matrix by up-regulation of the matrix metalloproteinases MMP2, MMP7 and MMP9, and thereby facilitates cell migration and wound healing. Promotes smooth muscle cell migration, and thereby contributes to arterial wound healing. Also plays a role in tumor cell invasion. Phosphorylates PTPN11. Required for normal blastocyst implantation during pregnancy, for normal mammary gland differentiation and normal lactation. Required for normal ear morphology and normal hearing.
May play a role in the correct development and proper functioning of the peripheral and central nervous system and be involved in cell adhesion and intercellular communication.
Score = 170 (64.9 bits), Expect = 7.1e-13, P = 7.1e-13
Identities = 36/78 (46%), Positives = 48/78 (61%)
Query: 11 RLKVEQAGGAWCPKNPVEKD-IREFIQIDLGSPHVVTGVQTQGRYDHGRGQEYTEEYILE 69
RL E+ GAWCP+ PVE D ++EF+QIDL + H +T V TQGR+ G G E+ Y +
Sbjct: 62 RLDSEEGDGAWCPEIPVEPDDLKEFLQIDLHTLHFITLVGTQGRHAGGHGIEFAPMYKIN 121
Query: 70 YWRPGLRDWKQYYGGNGK 87
Y R G R W + +GK
Sbjct: 122 YSRDGTR-WISWRNRHGK 138
Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 34/69 (49%), Positives = 44/69 (63%)
Query: 11 RLKVEQAGGAWCPKNPVEKD-IREFIQIDLGSPHVVTGVQTQGRYDHGRGQEYTEEYILE 69
RL E+ GAWCP+ PVE D ++EF+QIDL + H +T V TQGR+ G G E+ Y +
Sbjct: 62 RLDSEEGDGAWCPEIPVEPDDLKEFLQIDLHTLHFITLVGTQGRHAGGHGIEFAPMYKIN 121
Query: 70 YWRPGLRDW 78
Y R G R W
Sbjct: 122 YSRDGTR-W 129
Score = 173 (66.0 bits), Expect = 6.5e-12, P = 6.5e-12
Identities = 36/78 (46%), Positives = 48/78 (61%)
Query: 11 RLKVEQAGGAWCPKNPVEKD-IREFIQIDLGSPHVVTGVQTQGRYDHGRGQEYTEEYILE 69
RL E+ GAWCP+ PVE D ++EF+QIDL + H +T V TQGR+ G G E+ Y +
Sbjct: 64 RLDSEEGDGAWCPEIPVEPDDLKEFLQIDLRALHFITLVGTQGRHAGGHGNEFAPMYKIN 123
Query: 70 YWRPGLRDWKQYYGGNGK 87
Y R G R W + +GK
Sbjct: 124 YSRDGTR-WISWRNRHGK 140
Score = 170 (64.9 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 36/78 (46%), Positives = 48/78 (61%)
Query: 11 RLKVEQAGGAWCPKNPVEKD-IREFIQIDLGSPHVVTGVQTQGRYDHGRGQEYTEEYILE 69
RL E+ GAWCP+ PVE D ++EF+QIDL + H +T V TQGR+ G G E+ Y +
Sbjct: 62 RLDSEEGDGAWCPEIPVEPDDLKEFLQIDLHTLHFITLVGTQGRHAGGHGIEFAPMYKIN 121
Query: 70 YWRPGLRDWKQYYGGNGK 87
Y R G R W + +GK
Sbjct: 122 YSRDGTR-WISWRNRHGK 138
GO:0090091 "positive regulation of extracellular matrix disassembly" evidence=IEA
GO:0051091 "positive regulation of sequence-specific DNA binding transcription factor activity" evidence=IEA
GO:0048146 "positive regulation of fibroblast proliferation" evidence=IEA
Score = 170 (64.9 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 36/78 (46%), Positives = 48/78 (61%)
Query: 11 RLKVEQAGGAWCPKNPVEKD-IREFIQIDLGSPHVVTGVQTQGRYDHGRGQEYTEEYILE 69
RL E+ GAWCP+ PVE D ++EF+QIDL + H +T V TQGR+ G G E+ Y +
Sbjct: 62 RLDSEEGDGAWCPEIPVEPDDLKEFLQIDLHTLHFITLVGTQGRHAGGHGIEFAPMYKIN 121
Query: 70 YWRPGLRDWKQYYGGNGK 87
Y R G R W + +GK
Sbjct: 122 YSRDGTR-WISWRNRHGK 138
Score = 170 (64.9 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 36/78 (46%), Positives = 48/78 (61%)
Query: 11 RLKVEQAGGAWCPKNPVEKD-IREFIQIDLGSPHVVTGVQTQGRYDHGRGQEYTEEYILE 69
RL E+ GAWCP+ PVE D ++EF+QIDL + H +T V TQGR+ G G E+ Y +
Sbjct: 53 RLDSEEGDGAWCPEIPVEPDDLKEFLQIDLHTLHFITLVGTQGRHAGGHGIEFAPMYKIN 112
Query: 70 YWRPGLRDWKQYYGGNGK 87
Y R G R W + +GK
Sbjct: 113 YSRDGTR-WISWRNRHGK 129
GO:0090091 "positive regulation of extracellular matrix disassembly" evidence=IEA
GO:0051091 "positive regulation of sequence-specific DNA binding transcription factor activity" evidence=IEA
GO:0048146 "positive regulation of fibroblast proliferation" evidence=IEA
Score = 49.0 bits (117), Expect = 2e-08
Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 8/74 (10%)
Query: 15 EQAGGAWCPKNPVEKDIREFIQIDLGSPHVVTGVQTQGRYDHGRGQEYTEEYILEYWRPG 74
+ G WCP D+ +IQ+DLG VTGV T R+ +G Y EY
Sbjct: 30 GGSDGGWCPAKN---DLPPWIQVDLGRLRTVTGVITGRRHGNGDWVTYKLEYSD-----D 81
Query: 75 LRDWKQYYGGNGKA 88
+W Y GN K
Sbjct: 82 GVNWTTYKDGNSKV 95
Cell surface-attached carbohydrate-binding domain, present in eukaryotes and assumed to have horizontally transferred to eubacterial genomes. Length = 139
>PF00754 F5_F8_type_C: F5/8 type C domain; InterPro: IPR000421 Blood coagulation factors V and VIII contain a C-terminal, twice repeated, domain of about 150 amino acids, which is called F5/8 type C, FA58C, or C1/C2- like domain
In the Dictyostelium discoideum (Slime mold) cell adhesion protein discoidin, a related domain, named discoidin I-like domain, DLD, or DS, has been found which shares a common C-terminal region of about 110 amino acids with the FA58C domain, but whose N-terminal 40 amino acids are much less conserved. Similar domains have been detected in other extracellular and membrane proteins [, , ] In coagulation factors V and VIII the repeated domains compose part of a larger functional domain which promotes binding to anionic phospholipids on the surface of platelets and endothelial cells []. The C-terminal domain of the second FA58C repeat (C2) of coagulation factor VIII has been shown to be responsible for phosphatidylserine-binding and essential for activity [, ]. It forms an amphipathic alpha-helix, which binds to the membrane []. FA58C contains two conserved cysteines in most proteins, which link the extremities of the domain by a disulphide bond [, , ]. A further disulphide bond is located near the C-terminal of the second FA58C domain in MFGM Q08431 from SWISSPROT []. +------------------------------------------------------------------------+ | +-+ | | | | | CxPLGxxQITASxxxxxRLxxxWxxxxWxxxxxxQGxxxxxxxxxxxxGNxxxxxxxxxxRxPxcxcLRxExGC 'C': conserved cysteine involved in a disulphide bond. 'c': cysteine involved in a disulphide bond in MFGM Q08431 from SWISSPROT. 'x': any amino acid. upper case letters: conserved residues. ; GO: 0007155 cell adhesion; PDB: 2J22_A 3CQO_C 1SDD_B 2VCA_A 2VC9_A 2VCC_A 2VCB_A 2J1E_A 2J7M_A 2J1A_A ....
>PF06588 Muskelin_N: Muskelin N-terminus; InterPro: IPR010565 This entry represents the N-terminal region of muskelin and is found in conjunction with several IPR006652 from INTERPRO repeats
>PF07738 Sad1_UNC: Sad1 / UNC-like C-terminal ; InterPro: IPR012919 The Caenorhabditis elegans UNC-84 protein is a nuclear envelope protein that is involved in nuclear anchoring and migration during development
The S. pombe Sad1 protein localises at the spindle pole body. UNC-84 and Sad1 share a common C-terminal region that is often termed the SUN (Sad1 and UNC) domain [, ]. In mammals, the SUN domain is present in two proteins, Sun1 and Sun2 []. The SUN domain of Sun2 has been demonstrated to be in the periplasm []. ; PDB: 4DXT_A 3UNP_A 4DXR_A 4DXS_A.
>3f2z_A Uncharacterized protein BF3579; the present C-terminal domain is predominantly composed of B strands., structural genomics, PSI-2; 1.30A {Bacteroides fragilis} PDB: 2kd7_A
