Psyllid ID: psy6525

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360
Protein Sequence
MDNLIITNVMTRRVSERIKKERESFLIQVEEYSASDTDSDLDDKIFLSPTRKPKCSVKIKKEDTDVDIFFRSRRQYNNTYNDNLVQISPSDPEIMDTKNVLCYICDEILKDIDDLRYHGLLHATPLGTQFQCNVCFLMLNNRCYTRFHLLKHNWVRFKCDLCSRTFNSQSYLQQHKKHDHEGVKYKCKECGKCYTQNTNLKQHMLSHKGIFFICFHCNKNFTHRALLVRHMQKHSSERFKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEGQDYKCYICGNRYATQKYLEEHIRLHQGHTYMCNAKFSFNEQ
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccccccccccccccccccHHHHHHcccccccccccccccccccccHHHHHccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccEEEEEccccccccccccccccccccccHHHHccccccccccccccccccEccccHHHHHcccccccccccccHcccccEEcccccccccccccccEccccHHHHHHHHcccccccccccccccccEccccHHHHHHHHcccccEEcccccccEccccHHHHHHHHcccccccccccccccEccccHHHHHHHHccccccccccccccEccccHHHHHHHHcccccEEcccccccEccccHHHHHHHHcccccccccccccccEccccHHHHHHHHcccccccccccccccEccccHHHHHHHHccccccccccccccEccccHHHHHHHHcccccccccccEccccc
Coil and Loop (DISEMBL)
MDNLIITNVMTRRVSERIKKERESFLIQVEeysasdtdsdlddkiflsptrkpkcsvkikkedtdvdiFFRSRRqynntyndnlvqispsdpeimdtknVLCYICDEILKDIddlryhgllhatplgtqfqCNVCFLMLNNRCYTRFHLLKhnwvrfkcdlcsrtfnsqSYLQQHkkhdhegvkykckecgkcytqntnlkqhmlsHKGIFFICFHCNKNFTHRALLVRHMQKhsserfkcdlcgkvtpYYQHYLRHMRihqglevhecNLCAKLFACKRSLQDhmqrheepnkyqcAMCKKQYASKKMLEKHIRrhegqdykcyicgnRYATQKYLEEHIRLhqghtymcnakfsfneq
Flexible Loop (DISEMBL)
mdnliitnvmtrrvserikKERESFLIQVeeysasdtdsdlddkiflsptrkpkcsvkikkedtdvdiffrsrrqynntyndnlvqispsdpeimDTKNVLCYICDEILKDIDDLRYHGLLHATPLGTQFQCNVCFLMLNNRCYTRFHLLKHNWVRFKCDLCSRTFNSQSYLQQHKKHDHEGVKYKCKECGKCYTQNTNLKQHMLSHKGIFFICFHCNKNFTHRALLVRHMQKHSserfkcdlcgKVTPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRheepnkyqcaMCKKQYASKKMLEKHIRrhegqdykcyiCGNRYATQKYLEEHIRLHQGHTYMCNAKFSFNEQ
Low Complexity Region (SEG)
MDNLIITNVMTRRVSERIKKERESFLIQVEEYSASDTDSDLDDKIFLSPTRKPKCSVKIKKEDTDVDIFFRSRRQYNNTYNDNLVQISPSDPEIMDTKNVLCYICDEILKDIDDLRYHGLLHATPLGTQFQCNVCFLMLNNRCYTRFHLLKHNWVRFKCDLCSRTFNSQSYLQQHKKHDHEGVKYKCKECGKCYTQNTNLKQHMLSHKGIFFICFHCNKNFTHRALLVRHMQKHSSERFKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEGQDYKCYICGNRYATQKYLEEHIRLHQGHTYMCNAKFSFNEQ
Disordered region (IsUnstruct)
****IITNV***************FLI****************************SVKIKKEDTDVDIFFRSRRQYNNTYNDNLVQISPSDPEIMDTKNVLCYICDEILKDIDDLRYHGLLHATPLGTQFQCNVCFLMLNNRCYTRFHLLKHNWVRFKCDLCSRTFNSQSYLQQHKKHDHEGVKYKCKECGKCYTQNTNLKQHMLSHKGIFFICFHCNKNFTHRALLVRHMQKHSSERFKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSLQ***********YQCAMCKKQYASKKMLEKHIRRHEGQDYKCYICGNRYATQKYLEEHIRLHQGHTYMCNAKF*****
Disordered Region (DISOPRED)
******************************************************************DIFFRSRRQYNNTYNDNLVQISPSDPEIMDTKNVLCYICDEILKDIDDLRYHGLLHATPLGTQFQCNVCFLMLNNRCYTRFHLLKHNWVRFKCDLCSRTFNSQSYLQQHKKHDHEGVKYKCKECGKCYTQNTNLKQHMLSHKGIFFICFHCNKNFTHRALLVRHMQKHSSERFKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEGQDYKCYICGNRYATQKYLEEHIRLHQGHTYMCNAKFSF***
Disordered Region (DISEMBL)
MDNLIITNVMTRRVSERIKKERESFLIQVEEYSASDTDSDLDDKIFLSPTRKPKCSVKIKKEDTDVDIFFRSRRQYNNTYNDNLVQISPSDPEIMDTKNVLCYICDEILKDIDDLRYHGLLHATPLGTQFQCNVCFLMLNNRCYTRFHLLKHNWVRFKCDLCSRTFNSQ************GVKYKCKECGKCYTQNTNLKQHMLSHKGIFFICFHCNKNFTHRALLVRHMQKHSSERFKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEGQDYKCYICGNRYATQKYLEEHIRLHQGHTYMCNAKFSFNEQ
Disordered Region (DISPRO)
***LIITNVMTRRVSERIKKERESFLIQVEEYSASDTDSDLDDKIFLSPTRKPKCSVKIKKEDTDVDIFFRSRRQYNNTYNDNLVQISPSDPEIMDTKNVLCYICDEILKDIDDLRYHGLLHATPLGTQFQCNVCFLMLNNRCYTRFHLLKHNWVRFKCDLCSRTFNSQSYLQQHKKHDHEGVKYKCKECGKCYTQNTNLKQHMLSHKGIFFICFHCNKNFTHRALLVRHMQKHSSERFKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEGQDYKCYICGNRYATQKYLEEHIRLHQGHTYMCNAKF*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDNLIITNVMTRRVSERIKKERESFLIQVEEYSASDTDSDLDDKIFLSPTRKPKCSVKIKKEDTDVDIFFRSRRQYNNTYNDNLVQISPSDPEIMDTKNVLCYICDEILKDIDDLRYHGLLHATPLGTQFQCNVCFLMLNNRCYTRFHLLKHNWVRFKCDLCSRTFNSQSYLQQHKKHDHEGVKYKCKECGKCYTQNTNLKQHMLSHKGIFFICFHCNKNFTHRALLVRHMQKHSSERFKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEGQDYKCYICGNRYATQKYLEEHIRLHQGHTYMCNAKFSFNEQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	360	2.2.26 [Sep-21-2011]
P51522	516	Zinc finger protein 83 OS	yes	N/A	0.697	0.486	0.348	4e-32
Q96IR2	970	Zinc finger protein 845 O	no	N/A	0.688	0.255	0.338	8e-30
Q8N4W9	903	Zinc finger protein 808 O	no	N/A	0.794	0.316	0.333	4e-29
Q8BQN6	292	Zinc finger protein OZF O	no	N/A	0.688	0.849	0.319	1e-28
P10076	861	Zinc finger protein 26 OS	no	N/A	0.619	0.259	0.307	2e-28
Q5RFP4	292	Zinc finger protein OZF O	no	N/A	0.675	0.832	0.314	2e-28
Q15072	292	Zinc finger protein OZF O	no	N/A	0.675	0.832	0.314	2e-28
Q6ZNA1	936	Zinc finger protein 836 O	no	N/A	0.688	0.264	0.322	3e-28
P0CG31	522	Putative zinc finger prot	no	N/A	0.619	0.427	0.325	3e-28
Q8R0T2	568	Zinc finger protein 768 O	no	N/A	0.677	0.429	0.325	3e-28

>sp|P51522|ZNF83_HUMAN Zinc finger protein 83 OS=Homo sapiens GN=ZNF83 PE=2 SV=3

 Score =  139 bits (349), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 91/261 (34%), Positives = 140/261 (53%), Gaps = 10/261 (3%)

Query: 93  EIMDTKNVL--CYICDEILKDIDDLRYHGLLHATPLGTQFQCNVCFLMLNNRCYTRFHLL 150
           +I+ TK     C IC +I     +L  H  +H       ++CN C  + +N  +   H  
Sbjct: 112 QIIHTKETQFKCDICGKIFNKKSNLASHQRIHTGE--KPYKCNECGKVFHNMSHLAQHRR 169

Query: 151 KHNWVR-FKCDLCSRTFNSQSYLQQHKKHDHEGVK-YKCKECGKCYTQNTNLKQHMLSHK 208
            H   + +KC+ C + FN  S+L QH++  H G K YKC ECGK + Q ++L QH   H 
Sbjct: 170 IHTGEKPYKCNECGKVFNQISHLAQHQR-IHTGEKPYKCNECGKVFHQISHLAQHRTIHT 228

Query: 209 G-IFFICFHCNKNFTHRALLVRHMQKHSSER-FKCDLCGKVTPYYQHYLRHMRIHQGLEV 266
           G   + C  C K F+  + LV+H+  H+ E+ ++C++CGKV  +  H  +H RIH G + 
Sbjct: 229 GEKPYECNKCGKVFSRNSYLVQHLIIHTGEKPYRCNVCGKVFHHISHLAQHQRIHTGEKP 288

Query: 267 HECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEGQ-DYKCY 325
           ++CN C K+F+ K SL +H + H     Y+C  C K ++ K  L  H R H G+  YKC 
Sbjct: 289 YKCNECGKVFSHKSSLVNHWRIHTGEKPYKCNECGKVFSHKSSLVNHWRIHTGEKPYKCN 348

Query: 326 ICGNRYATQKYLEEHIRLHQG 346
            CG  ++   YL +H+ +H G
Sbjct: 349 ECGKVFSRNSYLAQHLIIHAG 369

May be involved in transcriptional regulation.
Homo sapiens (taxid: 9606)

>sp|Q96IR2|ZN845_HUMAN Zinc finger protein 845 OS=Homo sapiens GN=ZNF845 PE=2 SV=3

 Score =  131 bits (330), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 87/257 (33%), Positives = 132/257 (51%), Gaps = 9/257 (3%)

Query: 102 CYICDEILKDIDDLRYHGLLHATPLGTQFQCNVCFLMLNNRCYTRFHLLKHNWVR-FKCD 160
           C  C +  +    L YH  +H   +G  ++CN C  + +N      H   HN  R +KC+
Sbjct: 553 CNECGKAFRGQSALIYHQAIHG--IGKLYKCNDCHQVFSNATTIANHWRIHNEERSYKCN 610

Query: 161 LCSRTFNSQSYLQQHKKHDHEGVK-YKCKECGKCYTQNTNLKQHMLSHKG-IFFICFHCN 218
            C + F  +SYL  H +  H G K YKC+EC + ++  +NL++H   H G   + C  C 
Sbjct: 611 RCGKFFRHRSYLAVHWR-THSGEKPYKCEECDEAFSFKSNLQRHRRIHTGEKPYRCNECG 669

Query: 219 KNFTHRALLVRHMQKHSSER-FKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLCAKLFA 277
           K F+ ++ L  H + H+ E+ +KC+ CGK        + H  IH G + ++CN C K F+
Sbjct: 670 KTFSRKSYLTCHRRLHTGEKPYKCNECGKTFGRNSALIIHKAIHTGEKPYKCNECGKAFS 729

Query: 278 CKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEGQ-DYKCYICGNRYATQKY 336
            K SL  H++ H     Y+C  C K ++ K  LEKH R H G+  YKC +C   +    +
Sbjct: 730 QKSSLTCHLRLHTGEKPYKCEECDKVFSRKSSLEKHRRIHTGEKPYKCKVCDKAFGRDSH 789

Query: 337 LEEHIRLHQGH-TYMCN 352
           L +H R+H G   Y CN
Sbjct: 790 LAQHTRIHTGEKPYKCN 806

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q8N4W9|ZN808_HUMAN Zinc finger protein 808 OS=Homo sapiens GN=ZNF808 PE=2 SV=2

 Score =  129 bits (324), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 100/300 (33%), Positives = 145/300 (48%), Gaps = 14/300 (4%)

Query: 63  DTDVDIFFRSRRQYNNTYNDNLVQIS--PSDPEI-MDTKNVLCYICDEILKDIDDLRYHG 119
            T   I  R +   +N Y +N +  S  P   E+ M  K+  C    +       LR H 
Sbjct: 191 STSQRISCRPQIHISNNYGNNPLNSSLLPQKQEVHMREKSFPCNESGKAFNCSSLLRKHQ 250

Query: 120 LLHATPLG-TQFQCNVCFLMLNNRCYTRFHLLKHNWVR-FKCDLCSRTFNSQSYLQQHKK 177
           + H   LG  Q++C+VC  + N++ Y   H   H   + +KC  C ++F+ +S L  H +
Sbjct: 251 IPH---LGDKQYKCDVCGKLFNHKQYLACHRRCHTGEKPYKCKECGKSFSYKSSLTCHHR 307

Query: 178 HDHEGVK-YKCKECGKCYTQNTNLKQHMLSHKG-IFFICFHCNKNFTHRALLVRHMQKHS 235
             H GVK YKC ECGK + QN+ L  H   H G   + C  C K F  ++ L RH + H+
Sbjct: 308 -LHTGVKPYKCNECGKVFRQNSALVIHKAIHTGEKPYKCNECGKAFNQQSHLSRHQRLHT 366

Query: 236 SER-FKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNK 294
             + +KC +C K    + +   H RIH G + ++CN C K F  + SL  H   H     
Sbjct: 367 GVKPYKCKICEKAFACHSYLANHTRIHSGEKTYKCNECGKAFNHQSSLARHHILHTGEKP 426

Query: 295 YQCAMCKKQYASKKMLEKHIRRHEGQ-DYKCYICGNRYATQKYLEEHIRLHQGH-TYMCN 352
           Y+C  C K ++ K  LE+H R H G+  YKC +C   +     L  H R+H G  TY CN
Sbjct: 427 YKCEECDKVFSQKSTLERHKRIHTGEKPYKCKVCDTAFTCNSQLARHRRIHTGEKTYKCN 486

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q8BQN6|OZF_MOUSE Zinc finger protein OZF OS=Mus musculus GN=Znf146 PE=2 SV=2

 Score =  127 bits (320), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/257 (31%), Positives = 131/257 (50%), Gaps = 9/257 (3%)

Query: 102 CYICDEILKDIDDLRYHGLLHATPLGTQFQCNVCFLMLNNRCYTRFHLLKHNWVR-FKCD 160
           C +C ++     +L  H   H+      F+CN C    + + Y   H   H+  + F+C 
Sbjct: 18  CKVCGKLFSHKSNLTEHEHFHSRE--KPFECNECGKAFSQKQYVIKHQSTHSGEKLFECS 75

Query: 161 LCSRTFNSQSYLQQHKKHDHEGVK-YKCKECGKCYTQNTNLKQHMLSHKG-IFFICFHCN 218
            C + F+ +  L  H+K  H G K ++CK+CGK + Q +NL +H  +H G   FIC  C 
Sbjct: 76  DCGKAFSQKENLLTHQK-IHTGEKPFECKDCGKAFIQKSNLIRHQRTHTGEKPFICKECG 134

Query: 219 KNFTHRALLVRHMQKHSSER-FKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLCAKLFA 277
           K F+ ++ L  H + H  E+ FKC+ CG      ++ ++H  IH G + +ECN C K F+
Sbjct: 135 KTFSGKSNLTEHEKIHIGEKPFKCNECGTAFGQKKYLIKHQNIHTGEKPYECNECGKAFS 194

Query: 278 CKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEGQ-DYKCYICGNRYATQKY 336
            + SL  H++ H     Y+C +C K ++    L  H+R H G+  Y C  CG  ++    
Sbjct: 195 QRTSLIVHVRIHSGDKPYECNVCGKAFSQSSSLTVHVRSHTGEKPYGCNECGKAFSQFST 254

Query: 337 LEEHIRLHQG-HTYMCN 352
           L  H+R+H G   Y C+
Sbjct: 255 LALHLRIHTGKKPYQCS 271

Mus musculus (taxid: 10090)

>sp|P10076|ZFP26_MOUSE Zinc finger protein 26 OS=Mus musculus GN=Zfp26 PE=2 SV=2

 Score =  127 bits (318), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 70/228 (30%), Positives = 113/228 (49%), Gaps = 5/228 (2%)

Query: 130 FQCNVCFLMLNNRCYTRFHLLKHNWVR-FKCDLCSRTFNSQSYLQQHKKHDHEGVKYKCK 188
           ++C  C     +  Y   H+  H   + + C  C + F  +S L  H +       Y+CK
Sbjct: 246 YECKKCEKFFTHPVYLNIHMQSHTVEKPYDCKECGKAFTERSSLIVHLRQHTREKSYECK 305

Query: 189 ECGKCYTQNTNLKQHMLSHKG-IFFICFHCNKNFTHRALLVRHMQKHSSER-FKCDLCGK 246
           ECGK + Q + L +HM SH G   + C  C   F   + L  H++ H+ E+ F+C++CGK
Sbjct: 306 ECGKTFIQPSRLTEHMRSHTGEKPYQCDQCGNAFASSSYLTTHLRTHTGEKPFECNICGK 365

Query: 247 VTPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYAS 306
                 + L H+R H G + +EC +C K F+ +  L  H+++H     Y C  C+K + S
Sbjct: 366 AFTRSSYLLGHIRTHTGEKPYECKVCGKAFSGRSWLTIHLRKHTGERPYPCTECEKAFTS 425

Query: 307 KKMLEKHIRRHEGQ-DYKCYICGNRYATQKYLEEHIRLHQG-HTYMCN 352
              L +HI+ H G+  ++C +C   +     L+ H R+H G   Y CN
Sbjct: 426 FAQLTEHIKTHTGEKPFRCKVCARTFRNSSCLKTHFRIHTGIKPYKCN 473

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

>sp|Q5RFP4|OZF_PONAB Zinc finger protein OZF OS=Pongo abelii GN=ZNF146 PE=2 SV=1

 Score =  127 bits (318), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 79/251 (31%), Positives = 127/251 (50%), Gaps = 8/251 (3%)

Query: 101 LCYICDEILKDIDDLRYHGLLHATPLGTQFQCNVCFLMLNNRCYTRFHLLKHNWVR-FKC 159
            C +C ++     +L  H   H       F+CN C    + + Y   H   H   + F+C
Sbjct: 17  ACKVCGKVFSHKSNLTEHEHFHTRE--KPFECNECGKAFSQKQYVIKHQNTHTGEKLFEC 74

Query: 160 DLCSRTFNSQSYLQQHKKHDHEGVK-YKCKECGKCYTQNTNLKQHMLSHKG-IFFICFHC 217
           + C ++F+ +  L  H+K  H G K ++CK+CGK + Q +NL +H  +H G   F+C  C
Sbjct: 75  NECGKSFSQKENLLTHQK-IHTGEKPFECKDCGKAFIQKSNLIRHQRTHTGEKPFVCKEC 133

Query: 218 NKNFTHRALLVRHMQKHSSER-FKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLCAKLF 276
            K F+ ++ L  H + H  E+ FKC  CG      ++ ++H  IH G + +ECN C K F
Sbjct: 134 GKTFSGKSNLTEHEKIHIGEKPFKCSECGTAFGQKKYLIKHQNIHTGEKPYECNECGKAF 193

Query: 277 ACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEGQ-DYKCYICGNRYATQK 335
           + + SL  H++ H     Y+C +C K ++    L  H+R H G+  Y C  CG  ++   
Sbjct: 194 SQRTSLIVHVRIHSGDKPYECNVCGKAFSQSSSLTVHVRSHTGEKPYGCNECGKAFSQFS 253

Query: 336 YLEEHIRLHQG 346
            L  H+R+H G
Sbjct: 254 TLALHLRIHTG 264

Pongo abelii (taxid: 9601)

>sp|Q15072|OZF_HUMAN Zinc finger protein OZF OS=Homo sapiens GN=ZNF146 PE=1 SV=2

 Score =  127 bits (318), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 79/251 (31%), Positives = 127/251 (50%), Gaps = 8/251 (3%)

Query: 101 LCYICDEILKDIDDLRYHGLLHATPLGTQFQCNVCFLMLNNRCYTRFHLLKHNWVR-FKC 159
            C +C ++     +L  H   H       F+CN C    + + Y   H   H   + F+C
Sbjct: 17  ACKVCGKVFSHKSNLTEHEHFHTRE--KPFECNECGKAFSQKQYVIKHQNTHTGEKLFEC 74

Query: 160 DLCSRTFNSQSYLQQHKKHDHEGVK-YKCKECGKCYTQNTNLKQHMLSHKG-IFFICFHC 217
           + C ++F+ +  L  H+K  H G K ++CK+CGK + Q +NL +H  +H G   F+C  C
Sbjct: 75  NECGKSFSQKENLLTHQK-IHTGEKPFECKDCGKAFIQKSNLIRHQRTHTGEKPFVCKEC 133

Query: 218 NKNFTHRALLVRHMQKHSSER-FKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLCAKLF 276
            K F+ ++ L  H + H  E+ FKC  CG      ++ ++H  IH G + +ECN C K F
Sbjct: 134 GKTFSGKSNLTEHEKIHIGEKPFKCSECGTAFGQKKYLIKHQNIHTGEKPYECNECGKAF 193

Query: 277 ACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEGQ-DYKCYICGNRYATQK 335
           + + SL  H++ H     Y+C +C K ++    L  H+R H G+  Y C  CG  ++   
Sbjct: 194 SQRTSLIVHVRIHSGDKPYECNVCGKAFSQSSSLTVHVRSHTGEKPYGCNECGKAFSQFS 253

Query: 336 YLEEHIRLHQG 346
            L  H+R+H G
Sbjct: 254 TLALHLRIHTG 264

Homo sapiens (taxid: 9606)

>sp|Q6ZNA1|ZN836_HUMAN Zinc finger protein 836 OS=Homo sapiens GN=ZNF836 PE=2 SV=2

 Score =  126 bits (316), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/257 (32%), Positives = 127/257 (49%), Gaps = 9/257 (3%)

Query: 102 CYICDEILKDIDDLRYHGLLHATPLGTQFQCNVCFLMLNNRCYTRFHLLKHNWVR-FKCD 160
           C IC +      +L  H  +H+      ++C+ C            H + H   + + CD
Sbjct: 388 CNICGKSFSQSSNLATHQTVHSG--NKPYKCDECGKTFKRSSSLTTHQIIHTGEKPYTCD 445

Query: 161 LCSRTFNSQSYLQQHKKHDHEGVK-YKCKECGKCYTQNTNLKQHMLSHKG-IFFICFHCN 218
           +C + F+ +S L +H++  H G K YKC ECGK ++Q ++L  H   H G   + C  C 
Sbjct: 446 VCDKVFSQRSQLARHQR-SHTGEKPYKCNECGKVFSQTSHLVGHRRIHTGEKPYKCDKCG 504

Query: 219 KNFTHRALLVRHMQKHSSE-RFKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLCAKLFA 277
           K F   +LL RH   H+ E R++C  CGKV       +RH+RIH G + ++CN+C K+F 
Sbjct: 505 KAFKQGSLLTRHKIIHTREKRYQCGECGKVFSENSCLVRHLRIHTGEQPYKCNVCGKVFN 564

Query: 278 CKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEGQ-DYKCYICGNRYATQKY 336
              +L  H + H     +QC  C   + +   L +H+R H GQ  YKC +CG  +     
Sbjct: 565 YSGNLSIHKRIHTGEKPFQCNECGTVFRNYSCLARHLRIHTGQKPYKCNVCGKVFNDSGN 624

Query: 337 LEEHIRLHQGH-TYMCN 352
           L  H R+H G   + CN
Sbjct: 625 LSNHKRIHTGEKPFQCN 641

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|P0CG31|Z286B_HUMAN Putative zinc finger protein 286B OS=Homo sapiens GN=ZNF286B PE=5 SV=1

 Score =  126 bits (316), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 74/227 (32%), Positives = 113/227 (49%), Gaps = 4/227 (1%)

Query: 130 FQCNVCFLMLNNRCYTRFHLLKHNWVRFKCDLCSRTFNSQSYLQQHKKHDHEGVKYKCKE 189
           + CN C    ++R     H   H  + F+C  C +TF   S L  H++       Y+C E
Sbjct: 272 YTCNECGKSFSHRANLTKHQRTHTRILFECRECKKTFTESSSLATHQRIHVGERPYECNE 331

Query: 190 CGKCYTQNTNLKQHMLSHKGI-FFICFHCNKNFTHRALLVRHMQKHSSER-FKCDLCGKV 247
           CGK + ++T+L QH L H G+  + C  C+K F H + L++H + H+ E+ +KC  CGK 
Sbjct: 332 CGKGFNRSTHLVQHQLIHTGVRPYECNECDKAFIHSSALIKHQRTHTGEKPYKCQECGKA 391

Query: 248 TPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASK 307
             +     +H R+H G + +EC+ C K F+    L  H + H     Y+C+ C K ++  
Sbjct: 392 FSHCSSLTKHQRVHTGEKPYECSECGKTFSQSTHLVQHQRIHTGEKPYECSECGKTFSQS 451

Query: 308 KMLEKHIRRHEG-QDYKCYICGNRYATQKYLEEHIRLHQGH-TYMCN 352
               KH R H G + YKC  CG  +     L +H R H G   + CN
Sbjct: 452 SNFAKHQRIHIGKKPYKCSECGKAFIHSSALIQHQRTHTGEKPFRCN 498

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q8R0T2|ZN768_MOUSE Zinc finger protein 768 OS=Mus musculus GN=Znf768 PE=2 SV=1

 Score =  125 bits (315), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 82/252 (32%), Positives = 115/252 (45%), Gaps = 8/252 (3%)

Query: 98  KNVLCYICDEILKDIDDLRYHGLLHATPLGTQFQCNVCFLMLNNRCYTRFHLLKHNWVR- 156
           K   C +C +      DL  H   H       ++C  C     +  Y   H   H+  + 
Sbjct: 315 KPYKCEVCSKAFSQSSDLIKHQRTHTG--ERPYKCPRCGKAFADSSYLLRHQRTHSGQKP 372

Query: 157 FKCDLCSRTFNSQSYLQQHKK-HDHEGVKYKCKECGKCYTQNTNLKQHMLSHKGI-FFIC 214
           +KC  C + F   SYL +H++ H HE   Y C ECGKCY+QN++L+ H   H G   F C
Sbjct: 373 YKCPHCGKAFGDSSYLLRHQRTHSHE-RPYSCPECGKCYSQNSSLRSHQRVHTGQRPFSC 431

Query: 215 FHCNKNFTHRALLVRHMQKHSSER-FKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLCA 273
             C K+F+ R+ L+ H + H+ E+ FKC  CGK          H R H     + C  C 
Sbjct: 432 GICGKSFSQRSALIPHARSHAREKPFKCPECGKRFGQSSVLAIHARTHLPGRTYSCPDCG 491

Query: 274 KLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEGQ-DYKCYICGNRYA 332
           K F    +L  H + H     Y+CA+C K +     L +H R H G+  YKC  CG  ++
Sbjct: 492 KTFNRSSTLIQHQRSHTGERPYRCAVCGKGFCRSSTLLQHHRVHSGERPYKCDDCGKAFS 551

Query: 333 TQKYLEEHIRLH 344
               L  H R H
Sbjct: 552 QSSDLIRHQRTH 563

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	360
344308252	1219	PREDICTED: hypothetical protein LOC10066	0.613	0.181	0.337	9e-33
344240127	728	Zinc finger protein 26 [Cricetulus grise	0.683	0.337	0.350	3e-32
392349871	749	PREDICTED: zinc finger protein 26-like [	0.694	0.333	0.352	3e-32
354475221	1285	PREDICTED: zinc finger protein 26-like [	0.611	0.171	0.366	6e-32
291413282	971	PREDICTED: zinc finger protein 560-like	0.6	0.222	0.356	1e-31
338727218	1142	PREDICTED: zinc finger protein 91-like [	0.619	0.195	0.369	1e-31
334327315	1486	PREDICTED: hypothetical protein LOC10061	0.686	0.166	0.324	2e-31
358412956	736	PREDICTED: zinc finger protein 26-like [	0.6	0.293	0.360	2e-31
75677614	754	zinc finger protein 778 [Mus musculus] g	0.694	0.331	0.344	4e-31
426230557	708	PREDICTED: zinc finger protein 26-like [	0.6	0.305	0.360	4e-31

>gi|344308252|ref|XP_003422792.1| PREDICTED: hypothetical protein LOC100661788 [Loxodonta africana]

 Score =  147 bits (370), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 77/228 (33%), Positives = 114/228 (50%), Gaps = 7/228 (3%)

Query: 130 FQCNVCFLMLNNRCYTRFHLLKHNWVR-FKCDLCSRTFNSQSYLQQHKKHDHEGVK-YKC 187
           ++C  C    N+      H++ H+  R ++C  C + F+  S L  H +  H G + Y+C
Sbjct: 165 YKCKECGKAFNHASSLTRHIVTHSGARPYECKECGKAFSQSSSLTTHIR-THSGERPYEC 223

Query: 188 KECGKCYTQNTNLKQHMLSHKGIF-FICFHCNKNFTHRALLVRHMQKHSSER-FKCDLCG 245
           KECGK ++++++L  H  +H G   + C  C K F+  A L  HM+ HS ER ++C  CG
Sbjct: 224 KECGKAFSRSSHLTSHRRTHSGERPYKCKECGKTFSQSASLTIHMRTHSGERAYECKECG 283

Query: 246 KVTPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYA 305
           K   +      H RIH G+  +EC  C K F C   L  H++ H     Y+C  C K ++
Sbjct: 284 KAFSHASSLTTHTRIHSGVRPYECKECGKAFRCSSHLTSHIRTHSGDRPYECKECGKSFS 343

Query: 306 SKKMLEKHIRRHEGQ-DYKCYICGNRYATQKYLEEHIRLHQGHT-YMC 351
               L  HIR H G+  Y+C  CG  ++    L  HIR H G   Y C
Sbjct: 344 ESSALTTHIRTHSGERPYECKECGKAFSYSSALTTHIRTHSGEKPYEC 391

Source: Loxodonta africana

Species: Loxodonta africana

Genus: Loxodonta

Family: Elephantidae

Order: Proboscidea

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|344240127|gb|EGV96230.1| Zinc finger protein 26 [Cricetulus griseus]

 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 90/257 (35%), Positives = 130/257 (50%), Gaps = 11/257 (4%)

Query: 102 CYICDEILKDIDDLRYHGLLHATPLGTQFQCNVCFLMLNNRCYTRF-HLLKHNWVR-FKC 159
           C  C +  K   +L  H   H       +QC  C    + RCY    HL  H   + F+C
Sbjct: 255 CKECGKSFKYSANLNIHMRAHTGE--KPYQCKECGKAFS-RCYPLTQHLKTHTEEKPFEC 311

Query: 160 DLCSRTFNSQSYLQQHKKHDHEGVK-YKCKECGKCYTQNTNLKQHMLSHKG-IFFICFHC 217
            +C + F + S L  H +  H G+K YKCK+CGK +T  + L +H+ +H G   + C  C
Sbjct: 312 KVCGKCFRNSSCLNDHFR-VHTGIKPYKCKDCGKAFTGRSGLSKHLPTHTGEKPYSCKEC 370

Query: 218 NKNFTHRALLVRHMQKHSSER-FKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLCAKLF 276
            K FT  + L++HM+ H  ER F+CD CGK        + H+R H G +  EC +C K F
Sbjct: 371 GKAFTSTSGLIKHMKSHMGERPFECDHCGKAFASSSTLITHLRTHTGEKPFECKVCGKAF 430

Query: 277 ACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEGQD-YKCYICGNRYATQK 335
            C   L+ HM+ H     Y C  C + +  +  L KH+R H G++ ++C +CG  +A   
Sbjct: 431 TCSSYLRIHMRTHTGEKPYACKECGRAFTERTSLTKHLRTHTGENPFECNVCGKAFACSS 490

Query: 336 YLEEHIRLHQGH-TYMC 351
           YL  HIR H G   Y+C
Sbjct: 491 YLHNHIRTHTGEKPYVC 507

Source: Cricetulus griseus

Species: Cricetulus griseus

Genus: Cricetulus

Family: Cricetidae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|392349871|ref|XP_003750495.1| PREDICTED: zinc finger protein 26-like [Rattus norvegicus] gi|149020581|gb|EDL78386.1| rCG31761, isoform CRA_b [Rattus norvegicus]

 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 92/261 (35%), Positives = 133/261 (50%), Gaps = 11/261 (4%)

Query: 98  KNVLCYICDEILKDIDDLRYHGLLHATPLGTQFQCNVCFLMLNNRCYTRF-HLLKHNWVR 156
           K+  C  C +  K   +L  H   H       +QC  C    + RCY    HL  H   +
Sbjct: 272 KSYECKECGKSFKYSANLNIHMRSHTGE--KPYQCKECGKAFS-RCYPLTQHLKTHTEEK 328

Query: 157 -FKCDLCSRTFNSQSYLQQHKKHDHEGVK-YKCKECGKCYTQNTNLKQHMLSHKG-IFFI 213
            F+C +C + F + S L  H +  H G+K YKCK+CGK +T  + L +H+ +H G   + 
Sbjct: 329 PFECKVCGKCFRNSSCLNDHFR-VHTGIKPYKCKDCGKAFTGRSGLSKHLPTHTGEKPYE 387

Query: 214 CFHCNKNFTHRALLVRHMQKHSSER-FKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLC 272
           C  C K FT  + L++HM+ H  ER F+CD CGK        + H+R H G +  EC +C
Sbjct: 388 CKECGKAFTSTSGLIKHMKSHMGERPFECDHCGKAFASSSTLITHLRTHTGEKPFECKVC 447

Query: 273 AKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEGQD-YKCYICGNRY 331
            K FAC   L+ HM+ H     Y C  C + +  +  L KH+R H G++ ++C +CG  +
Sbjct: 448 GKAFACSSYLRIHMRTHTGEKPYVCKECGRAFTERTSLTKHLRTHTGENPFECNVCGKAF 507

Query: 332 ATQKYLEEHIRLHQGH-TYMC 351
           A   YL  HIR H G   Y+C
Sbjct: 508 ACSSYLHNHIRTHTGEKPYVC 528

Source: Rattus norvegicus

Species: Rattus norvegicus

Genus: Rattus

Family: Muridae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|354475221|ref|XP_003499828.1| PREDICTED: zinc finger protein 26-like [Cricetulus griseus]

 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 84/229 (36%), Positives = 122/229 (53%), Gaps = 9/229 (3%)

Query: 130 FQCNVCFLMLNNRCYTRF-HLLKHNWVR-FKCDLCSRTFNSQSYLQQHKKHDHEGVK-YK 186
           +QC  C    + RCY    HL  H   + F+C +C + F + S L  H +  H G+K YK
Sbjct: 499 YQCKECGKAFS-RCYPLTQHLKTHTEEKPFECKVCGKCFRNSSCLNDHFR-VHTGIKPYK 556

Query: 187 CKECGKCYTQNTNLKQHMLSHKG-IFFICFHCNKNFTHRALLVRHMQKHSSER-FKCDLC 244
           CK+CGK +T  + L +H+ +H G   + C  C K FT  + L++HM+ H  ER F+CD C
Sbjct: 557 CKDCGKAFTGRSGLSKHLPTHTGEKPYSCKECGKAFTSTSGLIKHMKSHMGERPFECDHC 616

Query: 245 GKVTPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQY 304
           GK        + H+R H G +  EC +C K F C   L+ HM+ H     Y C  C + +
Sbjct: 617 GKAFASSSTLITHLRTHTGEKPFECKVCGKAFTCSSYLRIHMRTHTGEKPYACKECGRAF 676

Query: 305 ASKKMLEKHIRRHEGQD-YKCYICGNRYATQKYLEEHIRLHQGH-TYMC 351
             +  L KH+R H G++ ++C +CG  +A   YL  HIR H G   Y+C
Sbjct: 677 TERTSLTKHLRTHTGENPFECNVCGKAFACSSYLHNHIRTHTGEKPYVC 725

Source: Cricetulus griseus

Species: Cricetulus griseus

Genus: Cricetulus

Family: Cricetidae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|291413282|ref|XP_002722905.1| PREDICTED: zinc finger protein 560-like [Oryctolagus cuniculus]

 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 83/233 (35%), Positives = 125/233 (53%), Gaps = 17/233 (7%)

Query: 130 FQCNVCFLMLNNRCYTRF-----HLLKHNWVR-FKCDLCSRTFNSQSYLQQHKKHDHEGV 183
           +QC  C      + ++RF     HL  H   + F+C +C + F + S L  H +  H G+
Sbjct: 293 YQCKEC-----GKAFSRFYPLTQHLKTHTGEKPFECKVCGKCFRNSSCLNDHFR-VHTGL 346

Query: 184 K-YKCKECGKCYTQNTNLKQHMLSHKG-IFFICFHCNKNFTHRALLVRHMQKHSSER-FK 240
           K YKCK+CGK +T  + L +H+ +H G   + C  C K FT  + L++H Q H+ ER F+
Sbjct: 347 KPYKCKDCGKAFTGRSGLSKHLPTHTGEKPYECKECGKAFTTSSGLIKHTQTHTGERPFE 406

Query: 241 CDLCGKVTPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMC 300
           C  CGK        + H+RIH G +  EC +C K F+C   L+ HM+ H     Y C  C
Sbjct: 407 CYQCGKAFASSSSLITHLRIHTGEKPFECKICGKAFSCSSYLRIHMRTHTGERPYVCKEC 466

Query: 301 KKQYASKKMLEKHIRRHEGQD-YKCYICGNRYATQKYLEEHIRLHQGH-TYMC 351
            + +  +  L KH+R H G++ ++C ICG  +A   YL+ H+R H G   Y+C
Sbjct: 467 GRAFTERTCLTKHLRTHTGENPFECSICGKAFACSSYLQNHMRTHTGEKPYIC 519

Source: Oryctolagus cuniculus

Species: Oryctolagus cuniculus

Genus: Oryctolagus

Family: Leporidae

Order: Lagomorpha

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|338727218|ref|XP_001492010.3| PREDICTED: zinc finger protein 91-like [Equus caballus]

 Score =  143 bits (360), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 85/230 (36%), Positives = 117/230 (50%), Gaps = 7/230 (3%)

Query: 130 FQCNVCFLMLNNRCYTRFHLLKHNWVR-FKCDLCSRTFNSQSYLQQHKKHDHEGVK-YKC 187
           FQC+ C            HL  H   + F+C++C + F S SYL  HK+  H G K YKC
Sbjct: 404 FQCDKCGKAFATSSNLTKHLGSHAVEKLFECNICGKRFTSSSYLIIHKR-THPGEKPYKC 462

Query: 188 KECGKCYTQNTNLKQHMLSHKG-IFFICFHCNKNFTHRALLVRHMQKHSSE-RFKCDLCG 245
           KECGK + ++ +LK HM +H G   + C  C K FT  + L  H++ H+ E  FKCD CG
Sbjct: 463 KECGKSFNRSFHLKVHMRTHTGEKPYACKECGKAFTDSSGLFYHIKTHTGELPFKCDACG 522

Query: 246 KVTPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYA 305
           K   +  H+ RH R H G +  ECN+C K FA    +  H + H     ++C  C K + 
Sbjct: 523 KAFAFSSHHSRHFRTHTGQKSFECNICGKTFASSSYVIVHKRIHTGEKPFKCEKCGKAFT 582

Query: 306 SKKMLEKHIRRHEGQ-DYKCYICGNRYATQKYLEEHIRLHQGH-TYMCNA 353
               L  HI+ H G+  +KC  CG  + T  +L  H R H G   + CN 
Sbjct: 583 QSSGLTVHIKTHTGEKPFKCDTCGKAFPTASHLTTHFRTHTGEKPFECNV 632

Source: Equus caballus

Species: Equus caballus

Genus: Equus

Family: Equidae

Order: Perissodactyla

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|334327315|ref|XP_003340863.1| PREDICTED: hypothetical protein LOC100617363 [Monodelphis domestica]

 Score =  142 bits (359), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 83/256 (32%), Positives = 121/256 (47%), Gaps = 9/256 (3%)

Query: 102  CYICDEILKDIDDLRYHGLLHATPLGTQFQCNVCFLMLNNRCYTRFHLLKHNWVR-FKCD 160
            C  C +       L  H  +H       ++C  C    N + +   H   H   + ++C 
Sbjct: 962  CKQCGKTFTRTSSLAIHQRIHTGE--KPYECKQCGKTFNQKFHLALHQRLHTGEKPYECK 1019

Query: 161  LCSRTFNSQSYLQQHKKHDHEGVK-YKCKECGKCYTQNTNLKQHMLSHKG-IFFICFHCN 218
             C +TFN +S+L  H++  H G K Y+CK+CGK + Q ++L  H   H G   + C  C 
Sbjct: 1020 QCGKTFNQRSHLAIHQR-IHTGEKPYECKQCGKTFIQRSSLAVHQRMHTGEKPYECKQCG 1078

Query: 219  KNFTHRALLVRHMQKHSSER-FKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLCAKLFA 277
            K F  R+ L  H + H+ E+ ++C  CGK      +   H+RIH G + +ECN C K F 
Sbjct: 1079 KTFKRRSYLAVHQRMHTGEKLYECKQCGKTFKRRSYLAVHLRIHTGEKPYECNQCGKTFT 1138

Query: 278  CKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEGQD-YKCYICGNRYATQKY 336
               SL  H + H     Y+C  C K +A    L  H R H G+  Y+C  CGN +  + Y
Sbjct: 1139 STSSLAVHQRMHTGEKPYECNQCGKTFACTSSLAVHQRMHTGEKPYECNQCGNTFNQRSY 1198

Query: 337  LEEHIRLHQGHT-YMC 351
            L  H R+H G   Y C
Sbjct: 1199 LVVHQRIHTGEKPYEC 1214

Source: Monodelphis domestica

Species: Monodelphis domestica

Genus: Monodelphis

Family: Didelphidae

Order: Didelphimorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|358412956|ref|XP_003582435.1| PREDICTED: zinc finger protein 26-like [Bos taurus]

 Score =  142 bits (358), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 80/222 (36%), Positives = 118/222 (53%), Gaps = 6/222 (2%)

Query: 130 FQCNVCFLMLNNRCYTRFHLLKHNWVR-FKCDLCSRTFNSQSYLQQHKKHDHEGVK-YKC 187
           FQC+ C     +  Y R H+  H  ++ +KC  C + F S SYLQ H +  H G+K YKC
Sbjct: 282 FQCDTCGKAFGSSSYLRIHIRIHTGIKPYKCKRCGKAFVSSSYLQVHSR-IHTGIKPYKC 340

Query: 188 KECGKCYTQNTNLKQHMLSH-KGIFFICFHCNKNFTHRALLVRHMQKHSSER-FKCDLCG 245
           KECGK ++Q++NL  HM +H +   + C  C K+F   + L  H + H+ E+ +KC  CG
Sbjct: 341 KECGKDFSQSSNLTGHMKTHTRDQPYKCKVCGKHFHRSSDLTGHTKTHTGEQLYKCKECG 400

Query: 246 KVTPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYA 305
           K      H   H +IH G+++++C  C K F     L +HM  H     ++C  C K + 
Sbjct: 401 KAFGSSSHLRVHSQIHTGIKIYKCQECGKTFTGSSRLIEHMNTHTGEKPFKCDTCGKTFT 460

Query: 306 SKKMLEKHIRRHEGQ-DYKCYICGNRYATQKYLEEHIRLHQG 346
               L KH++ H G+   KC ICG  +    YL +H+R H G
Sbjct: 461 QSSCLTKHMKIHTGEKPLKCDICGTTFTQTSYLTQHMRTHTG 502

Source: Bos taurus

Species: Bos taurus

Genus: Bos

Family: Bovidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|75677614|ref|NP_001004190.2| zinc finger protein 778 [Mus musculus] gi|74194406|dbj|BAE24702.1| unnamed protein product [Mus musculus] gi|148693146|gb|EDL25093.1| zinc finger protein 560, isoform CRA_b [Mus musculus] gi|187954761|gb|AAI41212.1| Zinc finger protein 560 [Mus musculus]

 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 90/261 (34%), Positives = 131/261 (50%), Gaps = 11/261 (4%)

Query: 98  KNVLCYICDEILKDIDDLRYHGLLHATPLGTQFQCNVCFLMLNNRCYTRF-HLLKHNWVR 156
           K+  C  C +  K   +L  H   H       +QC  C    + RCY    HL  H   +
Sbjct: 277 KSYECKECGKSFKYSANLNIHMRTHTGE--KPYQCKECGKAFS-RCYPLTQHLKTHTEEK 333

Query: 157 -FKCDLCSRTFNSQSYLQQHKKHDHEGVK-YKCKECGKCYTQNTNLKQHMLSHKG-IFFI 213
            F+C +C + F + S L  H +  H G+K YKCK+CGK +T  + L +H+ +H G   + 
Sbjct: 334 PFECKVCGKCFRNSSCLNDHFR-VHTGIKPYKCKDCGKAFTGRSGLSKHLPTHTGEKPYE 392

Query: 214 CFHCNKNFTHRALLVRHMQKHSSER-FKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLC 272
           C  C K F   + L++HM+ H  ER F+CD CGK        + H+R H G +  EC +C
Sbjct: 393 CKECGKAFPSTSGLIKHMKSHMGERPFECDHCGKAFASSSTLITHLRTHTGEKPFECQVC 452

Query: 273 AKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEGQD-YKCYICGNRY 331
            K F C   L+ HM+ H     Y C  C + +  +  L KH+R H G++ ++C +CG  +
Sbjct: 453 GKAFTCSSYLRIHMRTHTGEKPYVCKECGRAFTERTSLTKHLRTHTGENPFECNMCGKAF 512

Query: 332 ATQKYLEEHIRLHQGH-TYMC 351
           A   YL  HIR H G   Y+C
Sbjct: 513 ACSSYLHNHIRTHTGEKPYVC 533

Source: Mus musculus

Species: Mus musculus

Genus: Mus

Family: Muridae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|426230557|ref|XP_004009336.1| PREDICTED: zinc finger protein 26-like [Ovis aries]

 Score =  141 bits (356), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 80/222 (36%), Positives = 118/222 (53%), Gaps = 6/222 (2%)

Query: 130 FQCNVCFLMLNNRCYTRFHLLKHNWVR-FKCDLCSRTFNSQSYLQQHKKHDHEGVK-YKC 187
           FQC+ C     +  Y R H+  H  ++ +KC  C + F S SYLQ H +  H G+K YKC
Sbjct: 282 FQCDTCGKAFGSSSYLRIHIRIHTGIKPYKCKRCGKAFVSSSYLQVHSR-IHTGIKPYKC 340

Query: 188 KECGKCYTQNTNLKQHMLSH-KGIFFICFHCNKNFTHRALLVRHMQKHSSER-FKCDLCG 245
           KECGK ++Q++NL  HM +H +   + C  C K+F   + L  H + H+ E+ +KC  CG
Sbjct: 341 KECGKDFSQSSNLTGHMKTHTRDQPYKCKVCGKDFHRSSDLTGHTKTHTGEQLYKCKECG 400

Query: 246 KVTPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYA 305
           K      H   H +IH G+++++C  C K F     L +HM  H     ++C  C K + 
Sbjct: 401 KAFGSSSHLRVHSQIHTGIKLYKCQECEKTFTGSSRLIEHMNTHTGEKPFKCDTCGKTFT 460

Query: 306 SKKMLEKHIRRHEGQ-DYKCYICGNRYATQKYLEEHIRLHQG 346
               L KH++ H G+   KC ICG  +    YL +H+R H G
Sbjct: 461 QSSCLTKHMKIHTGEKPLKCDICGTTFTQTSYLTQHMRTHTG 502

Source: Ovis aries

Species: Ovis aries

Genus: Ovis

Family: Bovidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	360
UNIPROTKB|P51522	516	ZNF83 "Zinc finger protein 83"	0.713	0.498	0.347	1.7e-41
UNIPROTKB|G5E6D7	525	G5E6D7 "Uncharacterized protei	0.688	0.472	0.338	1.1e-39
UNIPROTKB|F1LZ97	386	F1LZ97 "Uncharacterized protei	0.688	0.642	0.342	2.9e-39
UNIPROTKB|J9P0T5	668	ZNF77 "Uncharacterized protein	0.616	0.332	0.350	6.8e-39
UNIPROTKB|Q96IR2	970	ZNF845 "Zinc finger protein 84	0.688	0.255	0.338	1.7e-38
UNIPROTKB|F1N7M4	754	ZNF560 "Uncharacterized protei	0.616	0.294	0.353	2.7e-38
UNIPROTKB|F1MY83	606	ZNF132 "Uncharacterized protei	0.719	0.427	0.318	3.2e-38
RGD|1561950	520	Zfp286a "zinc finger protein 2	0.705	0.488	0.320	3.5e-38
UNIPROTKB|Q8N4W9	903	ZNF808 "Zinc finger protein 80	0.791	0.315	0.334	3.8e-38
UNIPROTKB|I3L8J9	631	ZNF77 "Uncharacterized protein	0.688	0.393	0.314	9.9e-38

UNIPROTKB|P51522 ZNF83 "Zinc finger protein 83" [Homo sapiens (taxid:9606)]

 Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
 Identities = 93/268 (34%), Positives = 143/268 (53%)

Query:    93 EIMDTKNVL--CYICDEILKDIDDLRYHGLLHATPLGTQFQCNVCFLMLNNRCYTRFHLL 150
             +I+ TK     C IC +I     +L  H  +H       ++CN C  + +N  +   H  
Sbjct:   112 QIIHTKETQFKCDICGKIFNKKSNLASHQRIHTGE--KPYKCNECGKVFHNMSHLAQHRR 169

Query:   151 KHNWVR-FKCDLCSRTFNSQSYLQQHKKHDHEGVK-YKCKECGKCYTQNTNLKQHMLSHK 208
              H   + +KC+ C + FN  S+L QH++  H G K YKC ECGK + Q ++L QH   H 
Sbjct:   170 IHTGEKPYKCNECGKVFNQISHLAQHQRI-HTGEKPYKCNECGKVFHQISHLAQHRTIHT 228

Query:   209 GIF-FICFHCNKNFTHRALLVRHMQKHSSER-FKCDLCGKVTPYYQHYLRHMRIHQGLEV 266
             G   + C  C K F+  + LV+H+  H+ E+ ++C++CGKV  +  H  +H RIH G + 
Sbjct:   229 GEKPYECNKCGKVFSRNSYLVQHLIIHTGEKPYRCNVCGKVFHHISHLAQHQRIHTGEKP 288

Query:   267 HECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEGQD-YKCY 325
             ++CN C K+F+ K SL +H + H     Y+C  C K ++ K  L  H R H G+  YKC 
Sbjct:   289 YKCNECGKVFSHKSSLVNHWRIHTGEKPYKCNECGKVFSHKSSLVNHWRIHTGEKPYKCN 348

Query:   326 ICGNRYATQKYLEEHIRLHQGHT-YMCN 352
              CG  ++   YL +H+ +H G   Y C+
Sbjct:   349 ECGKVFSRNSYLAQHLIIHAGEKPYKCD 376

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=NAS

GO:0005634 "nucleus" evidence=NAS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=NAS

UNIPROTKB|G5E6D7 G5E6D7 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 423 (154.0 bits), Expect = 1.1e-39, P = 1.1e-39
 Identities = 87/257 (33%), Positives = 132/257 (51%)

Query:   102 CYICDEILKDIDDLRYHGLLHATPLGTQFQCNVCFLMLNNRCYTRFHLLKHNWVR-FKCD 160
             C  C ++L  I  L+ H   H       F+C+ C  +L +    + H+  H   + FKC 
Sbjct:   196 CSDCGKVLNSISHLKKHETTHIRE--KPFECSQCGKVLQSHGSIKLHMRTHTGEKPFKCY 253

Query:   161 LCSRTFNSQSYLQQHKKHDHEGVK-YKCKECGKCYTQNTNLKQHMLSHKGIF-FICFHCN 218
              C ++F+S SYL +HK+  H G K Y+C +CGK +  ++ L+QH  +H G   + C  CN
Sbjct:   254 QCGKSFSSSSYLARHKRI-HTGEKPYECHDCGKTFRDSSLLRQHARTHSGEKPYKCNQCN 312

Query:   219 KNFTHRALLVRHMQKHSSER-FKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLCAKLFA 277
             K F+    L  H   H+ E+ +KC+ CG+      ++ +H RIH G  V EC+LC K   
Sbjct:   313 KTFSRNDRLTTHQITHTGEKPYKCNDCGRTFSVLLYFKQHKRIHTGEIVTECSLCGKALK 372

Query:   278 CKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEGQD-YKCYICGNRYATQKY 336
              K SL+ HM+ H     Y+C  C K +     L  H + H G+   KC  CG  +  +  
Sbjct:   373 SKASLKTHMRIHTGEKPYKCNQCGKAFRMSSNLTTHKKIHTGEKPCKCNDCGKAFRDRSC 432

Query:   337 LEEHIRLHQGHT-YMCN 352
             L+EH+R+H G   + CN
Sbjct:   433 LKEHVRIHTGEKPFTCN 449

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|F1LZ97 F1LZ97 "Uncharacterized protein" [Rattus norvegicus (taxid:10116)]

 Score = 419 (152.6 bits), Expect = 2.9e-39, P = 2.9e-39
 Identities = 88/257 (34%), Positives = 127/257 (49%)

Query:   102 CYICDEILKDIDDLRYHGLLHATPLGTQFQCNVCFLMLNNRCYTRFHLLKHNWVR-FKCD 160
             C  C +       L+ H  +H       ++CN C    +     R H   H   + ++C 
Sbjct:    78 CNQCGKTFAYHSYLQMHERIHTGE--KPYECNHCGKAFSQHSSLRVHKRTHTGEKPYECS 135

Query:   161 LCSRTFNSQSYLQQHKKHDHEGVK-YKCKECGKCYTQNTNLKQHMLSHKGIF-FICFHCN 218
              C   F   S+LQ HK   H G K ++C +CGK +  N +L  H  +H G   + C HC 
Sbjct:   136 QCGEAFAYHSHLQIHKT-THTGEKPFQCNQCGKAFVYNNHLLVHKRTHTGEKPYECNHCG 194

Query:   219 KNFTHRALLVRHMQKHSSER-FKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLCAKLFA 277
             K F+ R+ L  H + H+ E+ +KC+ CGK      H  RH RIH G + HECN C K FA
Sbjct:   195 KAFSQRSSLCVHKKTHTGEKPYKCNECGKAFARNSHLQRHKRIHTGEKPHECNQCGKAFA 254

Query:   278 CKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEGQD-YKCYICGNRYATQKY 336
                +LQ H ++H     Y+C+ C K + S  +L  H R H G+  Y+C  CG  +A   +
Sbjct:   255 RHSTLQLHKRKHAGEKPYECSQCGKAFPSHNLLHIHKRTHTGEKPYECNQCGKTFAYHSH 314

Query:   337 LEEHIRLHQGHT-YMCN 352
             L+ H R+H G   Y+CN
Sbjct:   315 LQVHGRIHTGEKPYVCN 331

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|J9P0T5 ZNF77 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 420 (152.9 bits), Expect = 6.8e-39, P = 6.8e-39
 Identities = 82/234 (35%), Positives = 128/234 (54%)

Query:   122 HATPLGTQ--FQCNVCFLMLNNRCYTRF--HLLKHNWVRFK-CDLCSRTFNSQSYLQQHK 176
             ++  LG+Q   +C  C       C + F  H+  H   R   CD+C +TF  QSYL +H 
Sbjct:   211 YSNSLGSQKSLECGKCGKTFT--CPSSFQGHVQGHCEQRVHVCDVCGKTFMYQSYLTRHM 268

Query:   177 KHDHEGVK-YKCKECGKCYTQNTNLKQHMLSHKGI-FFICFHCNKNFTHRALLVRHMQKH 234
             +  H G + Y+C ECGK Y+  +  ++H+ +H G   + C  C K F + A L  HM  H
Sbjct:   269 R-THTGERPYECVECGKAYSCLSYFREHVKTHSGEKLYECKQCGKTFKYPASLQGHMMTH 327

Query:   235 SSER-FKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPN 293
             + ER + C  CGK     +++ RH+R H G++ +EC LC K ++C  SL++H+  H E  
Sbjct:   328 TGERPYLCQQCGKAFSCPKYFRRHVRTHSGVKPYECTLCGKAYSCSLSLREHVGTHSEER 387

Query:   294 KYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYICGNRYATQKYLEEHIRLHQG 346
              Y+C  C K +   +  ++H+R H G + Y+C  CG  Y++   L+EH+R H G
Sbjct:   388 PYECKQCGKAFRHPRYFQRHVRMHTGVKPYECKECGKAYSSSTSLQEHVRTHTG 441

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|Q96IR2 ZNF845 "Zinc finger protein 845" [Homo sapiens (taxid:9606)]

 Score = 422 (153.6 bits), Expect = 1.7e-38, P = 1.7e-38
 Identities = 87/257 (33%), Positives = 132/257 (51%)

Query:   102 CYICDEILKDIDDLRYHGLLHATPLGTQFQCNVCFLMLNNRCYTRFHLLKHNWVR-FKCD 160
             C  C +  +    L YH  +H   +G  ++CN C  + +N      H   HN  R +KC+
Sbjct:   553 CNECGKAFRGQSALIYHQAIHG--IGKLYKCNDCHQVFSNATTIANHWRIHNEERSYKCN 610

Query:   161 LCSRTFNSQSYLQQHKKHDHEGVK-YKCKECGKCYTQNTNLKQHMLSHKGIF-FICFHCN 218
              C + F  +SYL  H +  H G K YKC+EC + ++  +NL++H   H G   + C  C 
Sbjct:   611 RCGKFFRHRSYLAVHWR-THSGEKPYKCEECDEAFSFKSNLQRHRRIHTGEKPYRCNECG 669

Query:   219 KNFTHRALLVRHMQKHSSER-FKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLCAKLFA 277
             K F+ ++ L  H + H+ E+ +KC+ CGK        + H  IH G + ++CN C K F+
Sbjct:   670 KTFSRKSYLTCHRRLHTGEKPYKCNECGKTFGRNSALIIHKAIHTGEKPYKCNECGKAFS 729

Query:   278 CKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEGQD-YKCYICGNRYATQKY 336
              K SL  H++ H     Y+C  C K ++ K  LEKH R H G+  YKC +C   +    +
Sbjct:   730 QKSSLTCHLRLHTGEKPYKCEECDKVFSRKSSLEKHRRIHTGEKPYKCKVCDKAFGRDSH 789

Query:   337 LEEHIRLHQGHT-YMCN 352
             L +H R+H G   Y CN
Sbjct:   790 LAQHTRIHTGEKPYKCN 806

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|F1N7M4 ZNF560 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 417 (151.9 bits), Expect = 2.7e-38, P = 2.7e-38
 Identities = 81/229 (35%), Positives = 121/229 (52%)

Query:   130 FQCNVCFLMLNNRCYTRFHLLKHNWVR-FKCDLCSRTFNSQSYLQQHKKHDHEGVK-YKC 187
             FQC+ C     +  Y R H+  H  ++ +KC  C + F S SYLQ H +  H G+K YKC
Sbjct:   276 FQCDTCGKAFGSSSYLRIHIRIHTGIKPYKCKRCGKAFVSSSYLQVHSRI-HTGIKPYKC 334

Query:   188 KECGKCYTQNTNLKQHMLSH-KGIFFICFHCNKNFTHRALLVRHMQKHSSER-FKCDLCG 245
             KECGK ++Q++NL  HM +H +   + C  C K+F   + L  H + H+ E+ +KC  CG
Sbjct:   335 KECGKDFSQSSNLTGHMKTHTRDQPYKCKVCGKHFHRSSDLTGHTKTHTGEQLYKCKECG 394

Query:   246 KVTPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYA 305
             K      H   H +IH G+++++C  C K F     L +HM  H     ++C  C K + 
Sbjct:   395 KAFGSSSHLRVHSQIHTGIKIYKCQECGKTFTGSSRLIEHMNTHTGEKPFKCDTCGKTFT 454

Query:   306 SKKMLEKHIRRHEGQD-YKCYICGNRYATQKYLEEHIRLHQGHT-YMCN 352
                 L KH++ H G+   KC ICG  +    YL +H+R H G   + C+
Sbjct:   455 QSSCLTKHMKIHTGEKPLKCDICGTTFTQTSYLTQHMRTHTGEKPFKCD 503

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|F1MY83 ZNF132 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 385 (140.6 bits), Expect = 3.2e-38, Sum P(2) = 3.2e-38
 Identities = 86/270 (31%), Positives = 129/270 (47%)

Query:    98 KNVLCYICDEILKDIDDLRYHGLLHATPLGTQFQCNVCFLMLNNRCYTRFHLLKHNWVR- 156
             K+  C  C +       L +H  +H       ++C+ C    NNR +   H   H   R 
Sbjct:   252 KDYACSDCGKTFSHKLTLIHHQRIHTGE--RPYECSECGKAFNNRSHLARHEKVHTGERP 309

Query:   157 FKCDLCSRTFN-SQSYLQQHKKHDHEGVK-YKCKECGKCYTQNTNLKQHMLSHKGIF-FI 213
             FKC  C R F+ S ++L+  K H H  +K Y+C +CGK +++++ L QH   H G   F 
Sbjct:   310 FKCSKCGRAFSQSSNFLRHQKVHTH--IKPYECSQCGKAFSRSSALMQHWRVHTGERPFE 367

Query:   214 CFHCNKNFTHRALLVRHMQKHSSER-FKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLC 272
             C  C + F + + L +H + H+ ER F C  CG+      H LRH ++H G     C  C
Sbjct:   368 CGECGRAFNNNSNLAQHQKVHTGERPFGCSECGRDFSQSSHLLRHQKVHTGERPFACGEC 427

Query:   273 AKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEGQD-YKCYICGNRY 331
              K F+   +L  H + H     Y+C+ C+K ++    L +H R H G+  Y+C  CG  +
Sbjct:   428 GKTFSNSSTLIQHQKVHTGQRPYRCSECRKAFSRNSSLVQHWRTHTGEKPYECSECGKAF 487

Query:   332 ATQKYLEEHIRLH-QGHTYMCNAKFSFNEQ 360
             A    L EH R+H +   Y CN    F  Q
Sbjct:   488 AHSSSLIEHWRVHTRERPYECNECGKFFSQ 517

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

RGD|1561950 Zfp286a "zinc finger protein 286A" [Rattus norvegicus (taxid:10116)]

 Score = 385 (140.6 bits), Expect = 3.5e-38, Sum P(2) = 3.5e-38
 Identities = 84/262 (32%), Positives = 125/262 (47%)

Query:    96 DTKNVLCYICDEILKDIDDLRYHGLLHATPLGTQFQCNVCFLMLNNRCYTRFHLLKHNWV 155
             D K   C  C E+      L  H  +H       + C+ C    ++R     H   H  V
Sbjct:   238 DKKPHKCDDCGELFTYHSVLIRHQRVHTGE--KPYSCSECGKSFSHRANLTKHQRTHTRV 295

Query:   156 RFKCDLCSRTFNSQSYLQQHKKHDHEGVK-YKCKECGKCYTQNTNLKQHMLSHKGIF-FI 213
              F+C  C +TF   S L  H++  H G + Y+C ECGK + ++T+L QH L H G+  + 
Sbjct:   296 LFECGECKKTFIESSALAVHQRI-HIGERPYECGECGKGFNRSTHLAQHQLIHTGVKPYE 354

Query:   214 CFHCNKNFTHRALLVRHMQKHSSER-FKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLC 272
             C  C+K F H + L++H + H+ E+ +KC  CGK   +     +H R+H G + +EC+ C
Sbjct:   355 CNECDKAFIHSSALIKHQRTHTGEKPYKCQECGKAFSHCSSLTKHQRVHTGEKPYECSEC 414

Query:   273 AKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEGQD-YKCYICGNRY 331
              K F+    L  H + H     Y+C  C K ++      KH R H G+  YKC  CG  +
Sbjct:   415 GKTFSQSTHLVQHQRIHTGEKPYECHECGKTFSRSSNFAKHQRIHVGKKPYKCGECGKAF 474

Query:   332 ATQKYLEEHIRLHQGHT-YMCN 352
                  L +H R H G   + CN
Sbjct:   475 IHSSALIQHQRTHTGEKPFRCN 496

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|Q8N4W9 ZNF808 "Zinc finger protein 808" [Homo sapiens (taxid:9606)]

 Score = 418 (152.2 bits), Expect = 3.8e-38, P = 3.8e-38
 Identities = 100/299 (33%), Positives = 145/299 (48%)

Query:    64 TDVDIFFRSRRQYNNTYNDNLVQIS--PSDPEI-MDTKNVLCYICDEILKDIDDLRYHGL 120
             T   I  R +   +N Y +N +  S  P   E+ M  K+  C    +       LR H +
Sbjct:   192 TSQRISCRPQIHISNNYGNNPLNSSLLPQKQEVHMREKSFPCNESGKAFNCSSLLRKHQI 251

Query:   121 LHATPLGT-QFQCNVCFLMLNNRCYTRFHLLKHNWVR-FKCDLCSRTFNSQSYLQQHKKH 178
              H   LG  Q++C+VC  + N++ Y   H   H   + +KC  C ++F+ +S L  H + 
Sbjct:   252 PH---LGDKQYKCDVCGKLFNHKQYLACHRRCHTGEKPYKCKECGKSFSYKSSLTCHHRL 308

Query:   179 DHEGVK-YKCKECGKCYTQNTNLKQHMLSHKGIF-FICFHCNKNFTHRALLVRHMQKHSS 236
              H GVK YKC ECGK + QN+ L  H   H G   + C  C K F  ++ L RH + H+ 
Sbjct:   309 -HTGVKPYKCNECGKVFRQNSALVIHKAIHTGEKPYKCNECGKAFNQQSHLSRHQRLHTG 367

Query:   237 ER-FKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKY 295
              + +KC +C K    + +   H RIH G + ++CN C K F  + SL  H   H     Y
Sbjct:   368 VKPYKCKICEKAFACHSYLANHTRIHSGEKTYKCNECGKAFNHQSSLARHHILHTGEKPY 427

Query:   296 QCAMCKKQYASKKMLEKHIRRHEGQD-YKCYICGNRYATQKYLEEHIRLHQGH-TYMCN 352
             +C  C K ++ K  LE+H R H G+  YKC +C   +     L  H R+H G  TY CN
Sbjct:   428 KCEECDKVFSQKSTLERHKRIHTGEKPYKCKVCDTAFTCNSQLARHRRIHTGEKTYKCN 486

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|I3L8J9 ZNF77 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 408 (148.7 bits), Expect = 9.9e-38, P = 9.9e-38
 Identities = 80/254 (31%), Positives = 123/254 (48%)

Query:   102 CYICDEILKDIDDLRYHGLLHATPLGTQFQCNVCFLMLNNRCYTRFHLLKHNWVR-FKCD 160
             C  C +       LR H  +H       F+C  C          R H+  H+  R ++C 
Sbjct:   355 CTECGKAYSCSTSLREHERIHTGE--RPFECQHCGKAFTRHASLRGHMRTHSGERAYECT 412

Query:   161 LCSRTFNSQSYLQQHKKHDHEGVKYKCKECGKCYTQNTNLKQHMLSHKGIFFICFHCNKN 220
              C + F   S L++H +   E   Y C++CGK +    NL+ HM +H G   +C  C K+
Sbjct:   413 QCGKAFCWPSSLRKHVRMHSEEKPYGCQQCGKAFWYPANLRGHMRTHTGKIHVCEVCGKS 472

Query:   221 FTHRALLVRHMQKHSSER-FKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLCAKLFACK 279
             F++   L RH++ H+ E+ ++C  CGK      H+  H+R+H G + +EC  C K F+  
Sbjct:   473 FSYSCQLARHVRTHTGEKPYECQECGKAFTSISHFREHVRMHTGEKPYECKQCGKAFSWC 532

Query:   280 RSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEGQD-YKCYICGNRYATQKYLE 338
               L++HM+ H     Y+C  C K +   K L+ H+R H G+  Y C  CG  Y+  KY  
Sbjct:   533 TYLREHMRTHSGEKPYECKQCGKAFPYLKSLQGHVRIHTGEKPYVCKECGKSYSCPKYFR 592

Query:   339 EHIRLHQG-HTYMC 351
             +H + H G   Y C
Sbjct:   593 KHEKTHSGVKPYEC 606

GO:0005737 "cytoplasm" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	360
KOG3608|consensus	467		99.96
KOG2462|consensus	279		99.96
KOG1074|consensus	958		99.96
KOG2462|consensus	279		99.95
KOG3608|consensus	467		99.94
KOG1074|consensus	958		99.94
KOG3623|consensus	1007		99.92
KOG3623|consensus	1007		99.87
KOG3576|consensus	267		99.76
KOG3576|consensus	267		99.66
PLN03086	567	PRLI-interacting factor K; Provisional	99.47
PLN03086	567	PRLI-interacting factor K; Provisional	99.39
PHA00733	128	hypothetical protein	99.28
PHA00733	128	hypothetical protein	99.04
PHA02768	55	hypothetical protein; Provisional	99.0
KOG3993|consensus	500		98.97
KOG3993|consensus	500		98.88
PHA02768	55	hypothetical protein; Provisional	98.87
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.66
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.51
PHA00616	44	hypothetical protein	98.43
PHA00616	44	hypothetical protein	98.4
PHA00732	79	hypothetical protein	98.4
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.32
PHA00732	79	hypothetical protein	98.26
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.03
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.94
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.93
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.84
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.77
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.69
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.64
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.61
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.5
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.4
KOG1146|consensus	1406		97.32
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.29
KOG2231|consensus	669		97.09
smart00355	26	ZnF_C2H2 zinc finger.	97.05
KOG2231|consensus	669		97.02
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.93
smart00355	26	ZnF_C2H2 zinc finger.	96.83
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.76
COG5236	493	Uncharacterized conserved protein, contains RING Z	96.7
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.54
PRK04860	160	hypothetical protein; Provisional	96.44
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.43
KOG2785|consensus	390		96.43
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.39
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.23
PRK04860	160	hypothetical protein; Provisional	96.13
KOG2785|consensus	390		96.11
KOG2482|consensus	423		95.76
COG5236	493	Uncharacterized conserved protein, contains RING Z	95.7
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.56
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.54
KOG2482|consensus	423		95.34
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	94.79
KOG1146|consensus	1406		94.59
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	93.66
COG5048	467	FOG: Zn-finger [General function prediction only]	93.34
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	92.96
KOG4173|consensus	253		92.45
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	92.42
COG5048	467	FOG: Zn-finger [General function prediction only]	91.78
KOG2893|consensus	341		91.74
KOG4173|consensus	253		89.92
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	89.75
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	89.42
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	89.09
KOG2893|consensus	341		88.88
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	88.74
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	88.32
KOG2186|consensus	276		87.05
COG4049	65	Uncharacterized protein containing archaeal-type C	84.37
COG4049	65	Uncharacterized protein containing archaeal-type C	84.03
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	82.34
KOG2186|consensus	276		82.12

>KOG3608|consensus

Probab=99.96  E-value=1.9e-28  Score=206.69  Aligned_cols=247  Identities=24%  Similarity=0.482  Sum_probs=214.4

Q ss_pred             ceecc--cchhccCC-hHHHHHHHhhccC--------------------------------CCCCcccc--ccccccccC
Q psy6525          99 NVLCY--ICDEILKD-IDDLRYHGLLHAT--------------------------------PLGTQFQC--NVCFLMLNN  141 (360)
Q Consensus        99 ~~~C~--~C~~~f~~-~~~l~~H~~~~~~--------------------------------~~~~~~~C--~~C~~~f~~  141 (360)
                      .+.|.  .|++...+ ..+|.+|.-.|--                                ..+..|.|  ..|+..|.+
T Consensus        69 e~qC~w~~C~f~~~~~s~~l~RHvy~H~y~~~l~q~G~~al~~~~dig~c~~~f~~~~~ip~~g~~f~C~WedCe~~F~s  148 (467)
T KOG3608|consen   69 EHQCTWNSCDFRTENSSADLIRHVYFHCYHTKLKQQGKLALDLHPDIGACTAPFRLMEKIPALGQNFRCGWEDCEREFVS  148 (467)
T ss_pred             ceeEEeccCCccccchHHHHHhhhhhhhhHHHHHHHHHHHHhcCCCcCcccCCcchhhccccchhhhccChhhcCCcccC
Confidence            46776  48877766 5789999765511                                11234566  479999999


Q ss_pred             hHHHHHHHHHcCC--------------ccccccc--ccccccCHHHHHHHHHHcCCCceeecccccccccChhHHHHHHH
Q psy6525         142 RCYTRFHLLKHNW--------------VRFKCDL--CSRTFNSQSYLQQHKKHDHEGVKYKCKECGKCYTQNTNLKQHML  205 (360)
Q Consensus       142 ~~~l~~H~~~h~~--------------~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~l~~H~~  205 (360)
                      ...+..|+..|..              ..+.|..  |-+.|.++..|++|++.|.+++...|+.||.-|.++..|-.|++
T Consensus       149 ~~ef~dHV~~H~l~ceyd~~~~~~D~~pv~~C~W~~Ct~~~~~k~~LreH~r~Hs~eKvvACp~Cg~~F~~~tkl~DH~r  228 (467)
T KOG3608|consen  149 IVEFQDHVVKHALFCEYDIQKTPEDERPVTMCNWAMCTKHMGNKYRLREHIRTHSNEKVVACPHCGELFRTKTKLFDHLR  228 (467)
T ss_pred             HHHHHHHHHHhhhhhhhhhhhCCCCCCceeeccchhhhhhhccHHHHHHHHHhcCCCeEEecchHHHHhccccHHHHHHH
Confidence            9999999988831              1255655  99999999999999999999999999999999999999999988


Q ss_pred             hcCC---CCCcCccccccccCHHHHHHHHhhcCCCCcccCCCCCccCCHHHHHHHHH-HhcCCCcccccccccccCChhH
Q psy6525         206 SHKG---IFFICFHCNKNFTHRALLVRHMQKHSSERFKCDLCGKVTPYYQHYLRHMR-IHQGLEVHECNLCAKLFACKRS  281 (360)
Q Consensus       206 ~h~~---~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~  281 (360)
                      ..+.   .+|.|..|.+.|.++..|..|+..|..- |+|+.|+.+....+.|..|++ .|...+||+|..|++.|.+.+.
T Consensus       229 Rqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHvn~-ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esd  307 (467)
T KOG3608|consen  229 RQTELNTNSFQCAQCFKRFATEKLLKSHVVRHVNC-YKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESD  307 (467)
T ss_pred             hhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhhhc-ccccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHH
Confidence            7653   4899999999999999999999987654 999999999999999999998 5888999999999999999999


Q ss_pred             HHHhHhhhcCCCcccccc--chhhhcCHHHHHHHHhhhc-C---CcccccccccccCChHHHHHHHHHhCCC
Q psy6525         282 LQDHMQRHEEPNKYQCAM--CKKQYASKKMLEKHIRRHE-G---QDYKCYICGNRYATQKYLEEHIRLHQGH  347 (360)
Q Consensus       282 l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~-~---~~~~C~~C~~~f~~~~~l~~H~~~h~g~  347 (360)
                      |.+|..+|. +..|+|+.  |..+|.+...|++|++.++ |   -+|.|-.|++.|++-.+|..|+...+|.
T Consensus       308 L~kH~~~HS-~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~~Y~CH~Cdr~ft~G~~L~~HL~kkH~f  378 (467)
T KOG3608|consen  308 LAKHVQVHS-KTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPILYACHCCDRFFTSGKSLSAHLMKKHGF  378 (467)
T ss_pred             HHHHHHhcc-ccceecCCCCCcHHHHHHHHHHHHHHHhccCCCCCceeeecchhhhccchhHHHHHHHhhcc
Confidence            999999988 77899988  9999999999999999866 4   3799999999999999999999877775

>KOG2462|consensus

Probab=99.96  E-value=6.6e-30  Score=210.39  Aligned_cols=131  Identities=36%  Similarity=0.692  Sum_probs=91.8

Q ss_pred             eeecccccccccChhHHHHHHHhcCC----CCCcCccccccccCHHHHHHHHhhcCCCCcccCCCCCccCCHHHHHHHHH
Q psy6525         184 KYKCKECGKCYTQNTNLKQHMLSHKG----IFFICFHCNKNFTHRALLVRHMQKHSSERFKCDLCGKVTPYYQHYLRHMR  259 (360)
Q Consensus       184 ~~~C~~C~~~f~~~~~l~~H~~~h~~----~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~  259 (360)
                      .|+|+.||+.+.+..+|.+|.++|..    ..+.|++|++.|.+...|..|+++|. -+..|.+||+.|...+.|+.|+|
T Consensus       130 r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~-l~c~C~iCGKaFSRPWLLQGHiR  208 (279)
T KOG2462|consen  130 RYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT-LPCECGICGKAFSRPWLLQGHIR  208 (279)
T ss_pred             ceeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccC-CCcccccccccccchHHhhcccc
Confidence            57888888888888888888877754    25667777777777777777776665 34666677777766666666777


Q ss_pred             HhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccchhhhcCHHHHHHHHh
Q psy6525         260 IHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIR  315 (360)
Q Consensus       260 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~  315 (360)
                      +|+|||||.|++|+++|+++++|+.|+++|.+.++|+|..|+|+|+..+.|.+|..
T Consensus       209 THTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~E  264 (279)
T KOG2462|consen  209 THTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHSE  264 (279)
T ss_pred             cccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhhh
Confidence            77777777777777777777777777776666666667667666666666666654

>KOG1074|consensus

Probab=99.96  E-value=4.5e-30  Score=238.31  Aligned_cols=191  Identities=27%  Similarity=0.496  Sum_probs=159.9

Q ss_pred             cccccccccccCHHHHHHHHHHcCCCceeecccccccccChhHHHHHHHhcCCC-----CCcCc---cccccccCHHHHH
Q psy6525         157 FKCDLCSRTFNSQSYLQQHKKHDHEGVKYKCKECGKCYTQNTNLKQHMLSHKGI-----FFICF---HCNKNFTHRALLV  228 (360)
Q Consensus       157 ~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~-----~~~C~---~C~~~f~~~~~l~  228 (360)
                      -+|-+|.++..-.+.|+.|++.|.+++||+|.+||+.|.++.+|+.|+-.|...     .+.|+   +|-+.|.+.-.|.
T Consensus       606 NqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~V~lp  685 (958)
T KOG1074|consen  606 NQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNAVTLP  685 (958)
T ss_pred             cceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhccccccccccc
Confidence            589999999999999999999999999999999999999999999999999764     68999   9999999999999


Q ss_pred             HHHhhcCCC--------------CcccCCCCCccCCHHHHHHHHHHhcCC----------------C----ccccccccc
Q psy6525         229 RHMQKHSSE--------------RFKCDLCGKVTPYYQHYLRHMRIHQGL----------------E----VHECNLCAK  274 (360)
Q Consensus       229 ~H~~~h~~~--------------~~~C~~C~~~f~~~~~l~~H~~~h~~~----------------~----~~~C~~C~~  274 (360)
                      .|++.|.+.              .-+|..|.+.|.....+..++..|.+.                .    +..+..|+.
T Consensus       686 QhIriH~~~~~s~g~~a~e~~~~adq~~~~qk~~~~a~~f~~~~se~~~~~s~~~~~~~~~t~t~~~~~tp~~~e~~~~~  765 (958)
T KOG1074|consen  686 QHIRIHLGGQISNGGTAAEGILAADQCSSCQKTFSDARSFSQQISEQPSPESEPDEQMDERTETEELDVTPPPPENSCGR  765 (958)
T ss_pred             ceEEeecCCCCCCCcccccccchhcccchhhhcccccccchhhhhccCCcccCCcccccccccccccccCCCcccccccc
Confidence            999998743              247999999998888888887666321                1    355666777


Q ss_pred             ccCChhHHHHhHhhh-----------------------cC----------------------------------------
Q psy6525         275 LFACKRSLQDHMQRH-----------------------EE----------------------------------------  291 (360)
Q Consensus       275 ~f~~~~~l~~H~~~h-----------------------~~----------------------------------------  291 (360)
                      .+.....+..+-..+                       ++                                        
T Consensus       766 ~~~~e~~i~~~g~te~asa~~~~vg~~s~~~~~~~~~~T~~k~~~~~~~~~~~~~~~v~~~pvl~~~~~~~l~eg~~t~~  845 (958)
T KOG1074|consen  766 ELEGEMAISVRGSTEEASANLDEVGTVSAAGEAGEEDDTSEKPTQASSFPGEILAPSVNMDPVLWNQETSMLNEGLATKT  845 (958)
T ss_pred             ccCcccccccccchhhhhcChhhhcCccccchhhhhcccCCCCcccccCCCcCCccccccCchhhccccccccccccccc
Confidence            666655444332111                       00                                        


Q ss_pred             -------------------------------CCccccccchhhhcCHHHHHHHHhhhcC-CcccccccccccCChHHHHH
Q psy6525         292 -------------------------------PNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYICGNRYATQKYLEE  339 (360)
Q Consensus       292 -------------------------------~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~C~~~f~~~~~l~~  339 (360)
                                                     .....|.+||+.|.+.++|..|+|+|++ +||.|.+|++.|..+.+|+.
T Consensus       846 n~~t~~~~~~sv~qs~~~p~l~p~l~~~~pvnn~h~C~vCgk~FsSSsALqiH~rTHtg~KPF~C~fC~~aFttrgnLKv  925 (958)
T KOG1074|consen  846 NEITPEGPADSVIQSGGVPTLEPSLGRPGPVNNAHVCNVCGKQFSSSAALEIHMRTHTGPKPFFCHFCEEAFTTRGNLKV  925 (958)
T ss_pred             ccccCCCcchhhhhhccccccCCCCCCCCcccchhhhccchhcccchHHHHHhhhcCCCCCCccchhhhhhhhhhhhhhh
Confidence                                           0126799999999999999999999999 79999999999999999999


Q ss_pred             HHHHhCCC
Q psy6525         340 HIRLHQGH  347 (360)
Q Consensus       340 H~~~h~g~  347 (360)
                      ||.+|...
T Consensus       926 HMgtH~w~  933 (958)
T KOG1074|consen  926 HMGTHMWV  933 (958)
T ss_pred             hhcccccc
Confidence            99999876

>KOG2462|consensus

Probab=99.95  E-value=3.4e-29  Score=206.22  Aligned_cols=130  Identities=32%  Similarity=0.675  Sum_probs=110.9

Q ss_pred             CCcCccccccccCHHHHHHHHhhcCC----CCcccCCCCCccCCHHHHHHHHHHhcCCCcccccccccccCChhHHHHhH
Q psy6525         211 FFICFHCNKNFTHRALLVRHMQKHSS----ERFKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSLQDHM  286 (360)
Q Consensus       211 ~~~C~~C~~~f~~~~~l~~H~~~h~~----~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  286 (360)
                      .|.|+.||+.+.+.++|.+|.++|-.    +.+.|+.|++.|.+...|..|+++|+  -+++|.+||+.|.+..-|+-|+
T Consensus       130 r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWLLQGHi  207 (279)
T KOG2462|consen  130 RYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWLLQGHI  207 (279)
T ss_pred             ceeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccC--CCcccccccccccchHHhhccc
Confidence            67888888888888888888888753    35788888888888888888888887  5688888888888888888888


Q ss_pred             hhhcCCCccccccchhhhcCHHHHHHHHhhhcC-CcccccccccccCChHHHHHHHH
Q psy6525         287 QRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYICGNRYATQKYLEEHIR  342 (360)
Q Consensus       287 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~C~~~f~~~~~l~~H~~  342 (360)
                      |+|+||+||.|+.|+++|..+++|+.||++|.+ ++|+|..|+|+|..++.|..|..
T Consensus       208 RTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~E  264 (279)
T KOG2462|consen  208 RTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHSE  264 (279)
T ss_pred             ccccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhhh
Confidence            888888888888888888888888888888888 78888888888888888888864

>KOG3608|consensus

Probab=99.94  E-value=7.2e-27  Score=197.16  Aligned_cols=230  Identities=23%  Similarity=0.456  Sum_probs=198.9

Q ss_pred             ccccc--cccccccC-hHHHHHHHHHcCCc-----------------------------------cccccc--ccccccC
Q psy6525         129 QFQCN--VCFLMLNN-RCYTRFHLLKHNWV-----------------------------------RFKCDL--CSRTFNS  168 (360)
Q Consensus       129 ~~~C~--~C~~~f~~-~~~l~~H~~~h~~~-----------------------------------~~~C~~--C~~~f~~  168 (360)
                      .++|.  .|+....+ ...|.+|...|...                                   .|.|..  |+..|.+
T Consensus        69 e~qC~w~~C~f~~~~~s~~l~RHvy~H~y~~~l~q~G~~al~~~~dig~c~~~f~~~~~ip~~g~~f~C~WedCe~~F~s  148 (467)
T KOG3608|consen   69 EHQCTWNSCDFRTENSSADLIRHVYFHCYHTKLKQQGKLALDLHPDIGACTAPFRLMEKIPALGQNFRCGWEDCEREFVS  148 (467)
T ss_pred             ceeEEeccCCccccchHHHHHhhhhhhhhHHHHHHHHHHHHhcCCCcCcccCCcchhhccccchhhhccChhhcCCcccC
Confidence            56775  48777666 57899998776310                                   166765  9999999


Q ss_pred             HHHHHHHHHHcCCC-------------ceeec--ccccccccChhHHHHHHHhcCCC-CCcCccccccccCHHHHHHHHh
Q psy6525         169 QSYLQQHKKHDHEG-------------VKYKC--KECGKCYTQNTNLKQHMLSHKGI-FFICFHCNKNFTHRALLVRHMQ  232 (360)
Q Consensus       169 ~~~l~~H~~~~h~~-------------~~~~C--~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~  232 (360)
                      ...|..|...|.-.             ..+.|  ..|.+.|.++..|+.|+++|.+. ...|+.||..|+++..|..|++
T Consensus       149 ~~ef~dHV~~H~l~ceyd~~~~~~D~~pv~~C~W~~Ct~~~~~k~~LreH~r~Hs~eKvvACp~Cg~~F~~~tkl~DH~r  228 (467)
T KOG3608|consen  149 IVEFQDHVVKHALFCEYDIQKTPEDERPVTMCNWAMCTKHMGNKYRLREHIRTHSNEKVVACPHCGELFRTKTKLFDHLR  228 (467)
T ss_pred             HHHHHHHHHHhhhhhhhhhhhCCCCCCceeeccchhhhhhhccHHHHHHHHHhcCCCeEEecchHHHHhccccHHHHHHH
Confidence            99999998775421             13455  57999999999999999999986 6789999999999999999998


Q ss_pred             hcCC---CCcccCCCCCccCCHHHHHHHHHHhcCCCcccccccccccCChhHHHHhHhh-hcCCCccccccchhhhcCHH
Q psy6525         233 KHSS---ERFKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQR-HEEPNKYQCAMCKKQYASKK  308 (360)
Q Consensus       233 ~h~~---~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~  308 (360)
                      .-+.   .+|.|..|.+.|.+...|..|+..|..  -|+|+.|+.+....++|.+|++. |...+||+|+.|.+.|.+.+
T Consensus       229 Rqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHvn--~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~es  306 (467)
T KOG3608|consen  229 RQTELNTNSFQCAQCFKRFATEKLLKSHVVRHVN--CYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRES  306 (467)
T ss_pred             hhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhhh--cccccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHH
Confidence            6543   489999999999999999999999864  59999999999999999999995 88899999999999999999


Q ss_pred             HHHHHHhhhcCCcccccc--cccccCChHHHHHHHHHhC-CC---CccCCCcccccCC
Q psy6525         309 MLEKHIRRHEGQDYKCYI--CGNRYATQKYLEEHIRLHQ-GH---TYMCNAKFSFNEQ  360 (360)
Q Consensus       309 ~L~~H~~~h~~~~~~C~~--C~~~f~~~~~l~~H~~~h~-g~---~~~C~~c~~~f~~  360 (360)
                      .|.+|..+|..-.|+|..  |..+|.+..+|..|++.++ |.   +|.|..|.+.|++
T Consensus       307 dL~kH~~~HS~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~~Y~CH~Cdr~ft~  364 (467)
T KOG3608|consen  307 DLAKHVQVHSKTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPILYACHCCDRFFTS  364 (467)
T ss_pred             HHHHHHHhccccceecCCCCCcHHHHHHHHHHHHHHHhccCCCCCceeeecchhhhcc
Confidence            999999999977899998  9999999999999999776 65   6999999999964

>KOG1074|consensus

Probab=99.94  E-value=7.1e-28  Score=223.80  Aligned_cols=175  Identities=24%  Similarity=0.487  Sum_probs=124.4

Q ss_pred             eecccccccccChhHHHHHHHhcCCC-CCcCccccccccCHHHHHHHHhhcCCC-----CcccC---CCCCccCCHHHHH
Q psy6525         185 YKCKECGKCYTQNTNLKQHMLSHKGI-FFICFHCNKNFTHRALLVRHMQKHSSE-----RFKCD---LCGKVTPYYQHYL  255 (360)
Q Consensus       185 ~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~-----~~~C~---~C~~~f~~~~~l~  255 (360)
                      -+|-+|.++..-++.|+.|.++|+|. ||+|.+||+.|.++.+|+.|+-.|..+     .+.|+   +|.+.|...-.|.
T Consensus       606 NqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~V~lp  685 (958)
T KOG1074|consen  606 NQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNAVTLP  685 (958)
T ss_pred             cceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhccccccccccc
Confidence            57777888888888888888887774 778888888888888888887777654     46777   7777777777777


Q ss_pred             HHHHHhcCCC-------------cccccccccccCChhHHHHhHhhhc----------------CCC----ccccccchh
Q psy6525         256 RHMRIHQGLE-------------VHECNLCAKLFACKRSLQDHMQRHE----------------EPN----KYQCAMCKK  302 (360)
Q Consensus       256 ~H~~~h~~~~-------------~~~C~~C~~~f~~~~~l~~H~~~h~----------------~~~----~~~C~~C~~  302 (360)
                      .|+++|.+..             .-+|..|.+.|.....+..++-.|.                ++.    +..+..|+.
T Consensus       686 QhIriH~~~~~s~g~~a~e~~~~adq~~~~qk~~~~a~~f~~~~se~~~~~s~~~~~~~~~t~t~~~~~tp~~~e~~~~~  765 (958)
T KOG1074|consen  686 QHIRIHLGGQISNGGTAAEGILAADQCSSCQKTFSDARSFSQQISEQPSPESEPDEQMDERTETEELDVTPPPPENSCGR  765 (958)
T ss_pred             ceEEeecCCCCCCCcccccccchhcccchhhhcccccccchhhhhccCCcccCCcccccccccccccccCCCcccccccc
Confidence            7777776321             1357777777777777766665542                112    345556666


Q ss_pred             hhcCHHHHHHHHhhh-----------------------cC-C--------------------------------------
Q psy6525         303 QYASKKMLEKHIRRH-----------------------EG-Q--------------------------------------  320 (360)
Q Consensus       303 ~f~~~~~L~~H~~~h-----------------------~~-~--------------------------------------  320 (360)
                      .+.....+..+-..+                       ++ +                                      
T Consensus       766 ~~~~e~~i~~~g~te~asa~~~~vg~~s~~~~~~~~~~T~~k~~~~~~~~~~~~~~~v~~~pvl~~~~~~~l~eg~~t~~  845 (958)
T KOG1074|consen  766 ELEGEMAISVRGSTEEASANLDEVGTVSAAGEAGEEDDTSEKPTQASSFPGEILAPSVNMDPVLWNQETSMLNEGLATKT  845 (958)
T ss_pred             ccCcccccccccchhhhhcChhhhcCccccchhhhhcccCCCCcccccCCCcCCccccccCchhhccccccccccccccc
Confidence            555544443332111                       00 0                                      


Q ss_pred             ---------------------------------cccccccccccCChHHHHHHHHHhCCC-CccCCCcccccC
Q psy6525         321 ---------------------------------DYKCYICGNRYATQKYLEEHIRLHQGH-TYMCNAKFSFNE  359 (360)
Q Consensus       321 ---------------------------------~~~C~~C~~~f~~~~~l~~H~~~h~g~-~~~C~~c~~~f~  359 (360)
                                                       ...|..||+.|...++|..|+|+|+|+ ||.|.+|++.|.
T Consensus       846 n~~t~~~~~~sv~qs~~~p~l~p~l~~~~pvnn~h~C~vCgk~FsSSsALqiH~rTHtg~KPF~C~fC~~aFt  918 (958)
T KOG1074|consen  846 NEITPEGPADSVIQSGGVPTLEPSLGRPGPVNNAHVCNVCGKQFSSSAALEIHMRTHTGPKPFFCHFCEEAFT  918 (958)
T ss_pred             ccccCCCcchhhhhhccccccCCCCCCCCcccchhhhccchhcccchHHHHHhhhcCCCCCCccchhhhhhhh
Confidence                                             067999999999999999999999999 999999999985

>KOG3623|consensus

Probab=99.92  E-value=2.3e-25  Score=203.86  Aligned_cols=107  Identities=23%  Similarity=0.479  Sum_probs=98.2

Q ss_pred             eecccchhccCChHHHHHHHhhccCCCCCccccccccccccChHHHHHHHHHcCC--------------ccccccccccc
Q psy6525         100 VLCYICDEILKDIDDLRYHGLLHATPLGTQFQCNVCFLMLNNRCYTRFHLLKHNW--------------VRFKCDLCSRT  165 (360)
Q Consensus       100 ~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~--------------~~~~C~~C~~~  165 (360)
                      +.|++|+..++.+..|+.|++..+......|.|..|...|..+..|.+|+..|..              +.|+|..|+|.
T Consensus       211 ltcpycdrgykrltslkeHikyrhekne~nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtECgKA  290 (1007)
T KOG3623|consen  211 LTCPYCDRGYKRLTSLKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTECGKA  290 (1007)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccccccchh
Confidence            6799999999999999999886665557789999999999999999999998842              45999999999


Q ss_pred             ccCHHHHHHHHHHcCCCceeecccccccccChhHHHHHHHh
Q psy6525         166 FNSQSYLQQHKKHDHEGVKYKCKECGKCYTQNTNLKQHMLS  206 (360)
Q Consensus       166 f~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~  206 (360)
                      |+.+..|+.|++.|.|++||.|+.|+++|....++..||.+
T Consensus       291 FKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHmSS  331 (1007)
T KOG3623|consen  291 FKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHMSS  331 (1007)
T ss_pred             hhhHHHHHhhheeecCCCCcCCcccccccccCCcccccccc
Confidence            99999999999999999999999999999999999999854

>KOG3623|consensus

Probab=99.87  E-value=9.2e-23  Score=186.99  Aligned_cols=104  Identities=32%  Similarity=0.597  Sum_probs=94.1

Q ss_pred             ccccccccccccChHHHHHHHHHcC---CcccccccccccccCHHHHHHHHHHcCCC-------------ceeecccccc
Q psy6525         129 QFQCNVCFLMLNNRCYTRFHLLKHN---WVRFKCDLCSRTFNSQSYLQQHKKHDHEG-------------VKYKCKECGK  192 (360)
Q Consensus       129 ~~~C~~C~~~f~~~~~l~~H~~~h~---~~~~~C~~C~~~f~~~~~l~~H~~~~h~~-------------~~~~C~~C~~  192 (360)
                      ..+|++|.+.+.....|+.|+..-+   +..|.|.+|.++|..+..|.+||..|...             +.|+|..||+
T Consensus       210 lltcpycdrgykrltslkeHikyrhekne~nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtECgK  289 (1007)
T KOG3623|consen  210 LLTCPYCDRGYKRLTSLKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTECGK  289 (1007)
T ss_pred             hhcchhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccccccch
Confidence            4689999999999999999987543   66799999999999999999999987532             3699999999


Q ss_pred             cccChhHHHHHHHhcCCC-CCcCccccccccCHHHHHHHHh
Q psy6525         193 CYTQNTNLKQHMLSHKGI-FFICFHCNKNFTHRALLVRHMQ  232 (360)
Q Consensus       193 ~f~~~~~l~~H~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~  232 (360)
                      .|..+..|+.|+++|.|. ||.|+.|++.|.....+..||.
T Consensus       290 AFKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHmS  330 (1007)
T KOG3623|consen  290 AFKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHMS  330 (1007)
T ss_pred             hhhhHHHHHhhheeecCCCCcCCcccccccccCCccccccc
Confidence            999999999999999985 9999999999999999999984

>KOG3576|consensus

Probab=99.76  E-value=2.5e-19  Score=140.43  Aligned_cols=110  Identities=28%  Similarity=0.629  Sum_probs=93.5

Q ss_pred             CcccCCCCCccCCHHHHHHHHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccchhhhcCHHHHHHHHhhh
Q psy6525         238 RFKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRH  317 (360)
Q Consensus       238 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h  317 (360)
                      .|.|.+|++.|.....|.+|++-|...+.+-|..||+.|.....|++|+|+|+|.+||+|..|+++|+..-.|..|++.-
T Consensus       117 ~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~kv  196 (267)
T KOG3576|consen  117 SFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLKKV  196 (267)
T ss_pred             eeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHHHH
Confidence            57888888888888888888888888888888888888888888888888888888888888888888888888888764


Q ss_pred             cC------------CcccccccccccCChHHHHHHHHHhCCC
Q psy6525         318 EG------------QDYKCYICGNRYATQKYLEEHIRLHQGH  347 (360)
Q Consensus       318 ~~------------~~~~C~~C~~~f~~~~~l~~H~~~h~g~  347 (360)
                      +|            +.|.|+.||.+-.....+..|++.|+..
T Consensus       197 hgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~  238 (267)
T KOG3576|consen  197 HGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPF  238 (267)
T ss_pred             cCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCCC
Confidence            43            2588999999999999999999988754

>KOG3576|consensus

Probab=99.66  E-value=3e-17  Score=128.92  Aligned_cols=109  Identities=30%  Similarity=0.577  Sum_probs=83.4

Q ss_pred             CCcCccccccccCHHHHHHHHhhcCCC-CcccCCCCCccCCHHHHHHHHHHhcCCCcccccccccccCChhHHHHhHhhh
Q psy6525         211 FFICFHCNKNFTHRALLVRHMQKHSSE-RFKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRH  289 (360)
Q Consensus       211 ~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  289 (360)
                      .|.|.+|++.|.-...|.+|++.|..- ++-|..||+.|.+..+|++|+++|+|.+||+|..|+++|..+-+|..|++.-
T Consensus       117 ~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~kv  196 (267)
T KOG3576|consen  117 SFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLKKV  196 (267)
T ss_pred             eeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHHHH
Confidence            345555555555555555555555433 5678888888888888888888888888888888888888888888888764


Q ss_pred             cC-----------CCccccccchhhhcCHHHHHHHHhhhcC
Q psy6525         290 EE-----------PNKYQCAMCKKQYASKKMLEKHIRRHEG  319 (360)
Q Consensus       290 ~~-----------~~~~~C~~C~~~f~~~~~L~~H~~~h~~  319 (360)
                      +|           .+.|.|+.||.+-.....+..|+..|+.
T Consensus       197 hgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp  237 (267)
T KOG3576|consen  197 HGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHP  237 (267)
T ss_pred             cCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCC
Confidence            44           3568899999998888889999988765

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.47  E-value=1e-13  Score=128.98  Aligned_cols=145  Identities=17%  Similarity=0.363  Sum_probs=113.2

Q ss_pred             eeecccccccccChhHHHHHHHhcCCCCCcCcc--ccccccCHHHHHHHHhhcCCCCcccCCCCCccCCHHHHHHHHHHh
Q psy6525         184 KYKCKECGKCYTQNTNLKQHMLSHKGIFFICFH--CNKNFTHRALLVRHMQKHSSERFKCDLCGKVTPYYQHYLRHMRIH  261 (360)
Q Consensus       184 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h  261 (360)
                      ...|+.|.+.... ..|..|.....-....|+.  |+..|. +..+..|        +.|+.|++.|. ...|..|+.++
T Consensus       407 ~V~C~NC~~~i~l-~~l~lHe~~C~r~~V~Cp~~~Cg~v~~-r~el~~H--------~~C~~Cgk~f~-~s~LekH~~~~  475 (567)
T PLN03086        407 TVECRNCKHYIPS-RSIALHEAYCSRHNVVCPHDGCGIVLR-VEEAKNH--------VHCEKCGQAFQ-QGEMEKHMKVF  475 (567)
T ss_pred             eEECCCCCCccch-hHHHHHHhhCCCcceeCCcccccceee-ccccccC--------ccCCCCCCccc-hHHHHHHHHhc
Confidence            4578888877654 4566888776656667884  998884 3333444        58999999995 67889999987


Q ss_pred             cCCCcccccccccccCChhHHHHhHhhhcCCCccccccchhhhc----------CHHHHHHHHhhhcCCccccccccccc
Q psy6525         262 QGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYA----------SKKMLEKHIRRHEGQDYKCYICGNRY  331 (360)
Q Consensus       262 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~----------~~~~L~~H~~~h~~~~~~C~~C~~~f  331 (360)
                      +  .++.|+ ||+.+ .+..|..|+.+|.+.+++.|++|++.|.          ....|..|...+..+++.|..||+.+
T Consensus       476 H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~CG~rt~~C~~Cgk~V  551 (567)
T PLN03086        476 H--EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESICGSRTAPCDSCGRSV  551 (567)
T ss_pred             C--CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHhcCCcceEccccCCee
Confidence            5  789999 99654 6789999999999999999999999985          24579999998866899999999888


Q ss_pred             CChHHHHHHHHHh
Q psy6525         332 ATQKYLEEHIRLH  344 (360)
Q Consensus       332 ~~~~~l~~H~~~h  344 (360)
                      ..+ .|..|+-.-
T Consensus       552 rlr-dm~~H~~~~  563 (567)
T PLN03086        552 MLK-EMDIHQIAV  563 (567)
T ss_pred             eeh-hHHHHHHHh
Confidence            765 577886543

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.39  E-value=4.3e-13  Score=124.91  Aligned_cols=133  Identities=19%  Similarity=0.349  Sum_probs=107.7

Q ss_pred             CCcCccccccccCHHHHHHHHhhcCCCCcccCC--CCCccCCHHHHHHHHHHhcCCCcccccccccccCChhHHHHhHhh
Q psy6525         211 FFICFHCNKNFTHRALLVRHMQKHSSERFKCDL--CGKVTPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQR  288 (360)
Q Consensus       211 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  288 (360)
                      ...|+.|..... ...|..|.....-....|+.  |+..|. +..+.         +.+.|+.|++.|. ...|..|++.
T Consensus       407 ~V~C~NC~~~i~-l~~l~lHe~~C~r~~V~Cp~~~Cg~v~~-r~el~---------~H~~C~~Cgk~f~-~s~LekH~~~  474 (567)
T PLN03086        407 TVECRNCKHYIP-SRSIALHEAYCSRHNVVCPHDGCGIVLR-VEEAK---------NHVHCEKCGQAFQ-QGEMEKHMKV  474 (567)
T ss_pred             eEECCCCCCccc-hhHHHHHHhhCCCcceeCCcccccceee-ccccc---------cCccCCCCCCccc-hHHHHHHHHh
Confidence            457999988766 45666888776666677985  999884 33333         3368999999996 6889999999


Q ss_pred             hcCCCccccccchhhhcCHHHHHHHHhhhcC-CcccccccccccC----------ChHHHHHHHHHhCCCCccCCCcccc
Q psy6525         289 HEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYICGNRYA----------TQKYLEEHIRLHQGHTYMCNAKFSF  357 (360)
Q Consensus       289 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~C~~~f~----------~~~~l~~H~~~h~g~~~~C~~c~~~  357 (360)
                      |+  .++.|+ ||+.+ .+..|..|+++|.+ +++.|.+|++.|.          ..+.|..|..+..+.++.|..|++.
T Consensus       475 ~H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~CG~rt~~C~~Cgk~  550 (567)
T PLN03086        475 FH--EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESICGSRTAPCDSCGRS  550 (567)
T ss_pred             cC--CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHhcCCcceEccccCCe
Confidence            86  789999 99755 67899999999887 7999999999995          2458999999986669999999998


Q ss_pred             cC
Q psy6525         358 NE  359 (360)
Q Consensus       358 f~  359 (360)
                      |+
T Consensus       551 Vr  552 (567)
T PLN03086        551 VM  552 (567)
T ss_pred             ee
Confidence            75

>PHA00733 hypothetical protein

Probab=99.28  E-value=3.7e-12  Score=97.08  Aligned_cols=82  Identities=17%  Similarity=0.368  Sum_probs=62.0

Q ss_pred             CCcccccccccccCChhHHHHh--Hh---hhcCCCccccccchhhhcCHHHHHHHHhhhcCCcccccccccccCChHHHH
Q psy6525         264 LEVHECNLCAKLFACKRSLQDH--MQ---RHEEPNKYQCAMCKKQYASKKMLEKHIRRHEGQDYKCYICGNRYATQKYLE  338 (360)
Q Consensus       264 ~~~~~C~~C~~~f~~~~~l~~H--~~---~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~C~~C~~~f~~~~~l~  338 (360)
                      .+++.|.+|...|.....|..|  ++   .+.+.+||.|+.|++.|.+...|..|++.| ..+|.|..|++.|.....|.
T Consensus        38 ~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h-~~~~~C~~CgK~F~~~~sL~  116 (128)
T PHA00733         38 QKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT-EHSKVCPVCGKEFRNTDSTL  116 (128)
T ss_pred             hhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC-CcCccCCCCCCccCCHHHHH
Confidence            4567777777777766666555  21   234577888888888888888888888876 35788888888888888888


Q ss_pred             HHHHHhCC
Q psy6525         339 EHIRLHQG  346 (360)
Q Consensus       339 ~H~~~h~g  346 (360)
                      .|++..||
T Consensus       117 ~H~~~~h~  124 (128)
T PHA00733        117 DHVCKKHN  124 (128)
T ss_pred             HHHHHhcC
Confidence            88887766

>PHA00733 hypothetical protein

Probab=99.04  E-value=1.7e-10  Score=88.00  Aligned_cols=80  Identities=16%  Similarity=0.308  Sum_probs=59.0

Q ss_pred             CcccCCCCCccCCHHHHHHH--HH---HhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccchhhhcCHHHHHH
Q psy6525         238 RFKCDLCGKVTPYYQHYLRH--MR---IHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEK  312 (360)
Q Consensus       238 ~~~C~~C~~~f~~~~~l~~H--~~---~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~  312 (360)
                      ++.|.+|...|.....|..+  +.   .+.+.+||.|+.|++.|.+...|..|++.|  ..+|.|+.|++.|.....|..
T Consensus        40 ~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~sL~~  117 (128)
T PHA00733         40 RLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTDSTLD  117 (128)
T ss_pred             hHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHHHHHH
Confidence            56666666666655555444  11   234577888999999999988888888876  356899999999999999998


Q ss_pred             HHhhhcC
Q psy6525         313 HIRRHEG  319 (360)
Q Consensus       313 H~~~h~~  319 (360)
                      |+...++
T Consensus       118 H~~~~h~  124 (128)
T PHA00733        118 HVCKKHN  124 (128)
T ss_pred             HHHHhcC
Confidence            8887554

>PHA02768 hypothetical protein; Provisional

Probab=99.00  E-value=1.4e-10  Score=72.50  Aligned_cols=42  Identities=24%  Similarity=0.547  Sum_probs=26.5

Q ss_pred             cccccchhhhcCHHHHHHHHhhhcCCcccccccccccCChHHH
Q psy6525         295 YQCAMCKKQYASKKMLEKHIRRHEGQDYKCYICGNRYATQKYL  337 (360)
Q Consensus       295 ~~C~~C~~~f~~~~~L~~H~~~h~~~~~~C~~C~~~f~~~~~l  337 (360)
                      |.|+.||+.|+..++|..|+++|+ ++|+|..|++.|.+.+.|
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~-k~~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN-TNLKLSNCKRISLRTGEY   47 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC-CcccCCcccceeccccee
Confidence            566666666666666666666665 466666666666655544

>KOG3993|consensus

Probab=98.97  E-value=7.3e-11  Score=103.26  Aligned_cols=49  Identities=18%  Similarity=0.490  Sum_probs=22.6

Q ss_pred             cccccccccccChHHHHHHHHHc-CCcccccccccccccCHHHHHHHHHH
Q psy6525         130 FQCNVCFLMLNNRCYTRFHLLKH-NWVRFKCDLCSRTFNSQSYLQQHKKH  178 (360)
Q Consensus       130 ~~C~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~  178 (360)
                      |.|.+|...|.+...|..|.-.- -..-|+|+.|+|+|.-..+|..|.++
T Consensus       268 yiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRW  317 (500)
T KOG3993|consen  268 YICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRW  317 (500)
T ss_pred             HHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcc
Confidence            45555555555555554442110 01234555555555555555555544

>KOG3993|consensus

Probab=98.88  E-value=2e-10  Score=100.61  Aligned_cols=189  Identities=14%  Similarity=0.213  Sum_probs=119.8

Q ss_pred             ceecccchhccCChHHHHHHHhhccCCCCCccccccccccccChHHHHHHHHHcCCcccccccc----cccccCHHHHHH
Q psy6525          99 NVLCYICDEILKDIDDLRYHGLLHATPLGTQFQCNVCFLMLNNRCYTRFHLLKHNWVRFKCDLC----SRTFNSQSYLQQ  174 (360)
Q Consensus        99 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C----~~~f~~~~~l~~  174 (360)
                      .|+|.+|...|.+.-.|.+|.-....  .-.|+|+.|+++|+-..+|..|.+-|..++--=.-=    .+...+....+.
T Consensus       267 dyiCqLCK~kYeD~F~LAQHrC~RIV--~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~e  344 (500)
T KOG3993|consen  267 DYICQLCKEKYEDAFALAQHRCPRIV--HVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQE  344 (500)
T ss_pred             HHHHHHHHHhhhhHHHHhhccCCeeE--EeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhh
Confidence            48999999999999999999632222  235999999999999999999999996443111000    000011111110


Q ss_pred             HHHH--cCCCceeecccccccccChhHHHHHHHhcCCC------------------CCcCccccccccCHHHHHHHHhhc
Q psy6525         175 HKKH--DHEGVKYKCKECGKCYTQNTNLKQHMLSHKGI------------------FFICFHCNKNFTHRALLVRHMQKH  234 (360)
Q Consensus       175 H~~~--~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~------------------~~~C~~C~~~f~~~~~l~~H~~~h  234 (360)
                      --+.  .....-|.|..|++.|.+..-|+.|+.+|+..                  .+-|..|.-.+...+.-..+...+
T Consensus       345 a~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~~a~~~~g~~vl~~  424 (500)
T KOG3993|consen  345 AERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSSASDSHGDEVLYV  424 (500)
T ss_pred             ccccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccchhcccCcchhhcccccccccccccccccccccccceeee
Confidence            0000  01122688999999999999999998877532                  134555655554443322332222


Q ss_pred             CCC--CcccCCCCCccCCHHHHHHHHHHhcCCCcccccccccccCChhHHHHhHhhh
Q psy6525         235 SSE--RFKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRH  289 (360)
Q Consensus       235 ~~~--~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  289 (360)
                      .+.  .-.|+.|+..+.+...-..+.+.-..+..|.|.+|..+|.+...|.+|+...
T Consensus       425 a~sael~~pp~~~~ppsss~~sgg~~rlg~~~q~f~~ky~~atfyss~~ltrhin~~  481 (500)
T KOG3993|consen  425 AGSAELELPPYDGSPPSSSGSSGGYGRLGIAEQGFTCKYCPATFYSSPGLTRHINKC  481 (500)
T ss_pred             eccccccCCCCCCCCcccCCCCCccccccchhhccccccchHhhhcCcchHhHhhhc
Confidence            221  3457778877766555444444444456689999999999999999998763

>PHA02768 hypothetical protein; Provisional

Probab=98.87  E-value=6.5e-10  Score=69.49  Aligned_cols=42  Identities=19%  Similarity=0.557  Sum_probs=30.3

Q ss_pred             ccccccccccCChhHHHHhHhhhcCCCccccccchhhhcCHHHH
Q psy6525         267 HECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKML  310 (360)
Q Consensus       267 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L  310 (360)
                      |.|+.||+.|+..++|..|+++|+  ++|+|..|++.|...+.|
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEY   47 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceeccccee
Confidence            677777777777777777777776  567777777777766554

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.66  E-value=1e-08  Score=54.80  Aligned_cols=24  Identities=33%  Similarity=0.868  Sum_probs=12.4

Q ss_pred             HHHhHhhhcCCCccccccchhhhc
Q psy6525         282 LQDHMQRHEEPNKYQCAMCKKQYA  305 (360)
Q Consensus       282 l~~H~~~h~~~~~~~C~~C~~~f~  305 (360)
                      |.+|+++|+|++||.|++|++.|.
T Consensus         2 l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    2 LRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHSSSSSEEESSSSEEES
T ss_pred             HHHHhhhcCCCCCCCCCCCcCeeC
Confidence            445555555555555555555543

...

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.51  E-value=6.9e-08  Score=51.52  Aligned_cols=26  Identities=38%  Similarity=0.722  Sum_probs=23.4

Q ss_pred             HHHHHHHHhcCCCcccccccccccCC
Q psy6525         253 HYLRHMRIHQGLEVHECNLCAKLFAC  278 (360)
Q Consensus       253 ~l~~H~~~h~~~~~~~C~~C~~~f~~  278 (360)
                      +|.+|+++|+|++||.|+.|++.|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            47899999999999999999999864

...

>PHA00616 hypothetical protein

Probab=98.43  E-value=9e-08  Score=56.90  Aligned_cols=25  Identities=28%  Similarity=0.527  Sum_probs=10.6

Q ss_pred             cccccchhhhcCHHHHHHHHhhhcC
Q psy6525         295 YQCAMCKKQYASKKMLEKHIRRHEG  319 (360)
Q Consensus       295 ~~C~~C~~~f~~~~~L~~H~~~h~~  319 (360)
                      |+|+.||+.|...+.|..|+++|+|
T Consensus         2 YqC~~CG~~F~~~s~l~~H~r~~hg   26 (44)
T PHA00616          2 YQCLRCGGIFRKKKEVIEHLLSVHK   26 (44)
T ss_pred             CccchhhHHHhhHHHHHHHHHHhcC
Confidence            3444444444444444444444433

>PHA00616 hypothetical protein

Probab=98.40  E-value=1.9e-07  Score=55.52  Aligned_cols=33  Identities=21%  Similarity=0.459  Sum_probs=19.5

Q ss_pred             cccccccccccCChhHHHHhHhhhcCCCccccc
Q psy6525         266 VHECNLCAKLFACKRSLQDHMQRHEEPNKYQCA  298 (360)
Q Consensus       266 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  298 (360)
                      ||+|+.||+.|..++.|..|++.|+|++++.|+
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~   33 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLE   33 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCcccee
Confidence            355666666666666666666666666555554

>PHA00732 hypothetical protein

Probab=98.40  E-value=1.5e-07  Score=64.95  Aligned_cols=47  Identities=26%  Similarity=0.586  Sum_probs=28.8

Q ss_pred             cccccccccccCChhHHHHhHhh-hcCCCccccccchhhhcCHHHHHHHHhhhc
Q psy6525         266 VHECNLCAKLFACKRSLQDHMQR-HEEPNKYQCAMCKKQYASKKMLEKHIRRHE  318 (360)
Q Consensus       266 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  318 (360)
                      ||.|..|++.|.+..+|..|++. |.   ++.|+.|++.|.   .|..|.++..
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~---~l~~H~~~~~   48 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT---LTKCPVCNKSYR---RLNQHFYSQY   48 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC---CCccCCCCCEeC---ChhhhhcccC
Confidence            45667777777777777777663 43   246666666666   3566665443

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.32  E-value=7.8e-07  Score=57.02  Aligned_cols=50  Identities=26%  Similarity=0.539  Sum_probs=31.3

Q ss_pred             ccccccchhhhcCHHHHHHHHhh-hcC--CcccccccccccCChHHHHHHHHHhCC
Q psy6525         294 KYQCAMCKKQYASKKMLEKHIRR-HEG--QDYKCYICGNRYATQKYLEEHIRLHQG  346 (360)
Q Consensus       294 ~~~C~~C~~~f~~~~~L~~H~~~-h~~--~~~~C~~C~~~f~~~~~l~~H~~~h~g  346 (360)
                      .|.|++|++ ..+...|..|... |.+  +.+.|++|...++  .+|..|+..++|
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H~   54 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQHR   54 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhcC
Confidence            366777777 4455667777664 333  3567777776544  377777776654

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PHA00732 hypothetical protein

Probab=98.26  E-value=4.6e-07  Score=62.53  Aligned_cols=36  Identities=31%  Similarity=0.716  Sum_probs=17.4

Q ss_pred             cccccchhhhcCHHHHHHHHhh-hcCCcccccccccccC
Q psy6525         295 YQCAMCKKQYASKKMLEKHIRR-HEGQDYKCYICGNRYA  332 (360)
Q Consensus       295 ~~C~~C~~~f~~~~~L~~H~~~-h~~~~~~C~~C~~~f~  332 (360)
                      |.|+.|++.|.+...|..|++. |.  ++.|+.||+.|.
T Consensus         2 y~C~~Cgk~F~s~s~Lk~H~r~~H~--~~~C~~CgKsF~   38 (79)
T PHA00732          2 FKCPICGFTTVTLFALKQHARRNHT--LTKCPVCNKSYR   38 (79)
T ss_pred             ccCCCCCCccCCHHHHHHHhhcccC--CCccCCCCCEeC
Confidence            4455555555555555555542 32  234555555554

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.03  E-value=3.2e-06  Score=43.74  Aligned_cols=23  Identities=43%  Similarity=1.051  Sum_probs=15.6

Q ss_pred             ccccccccccCChHHHHHHHHHh
Q psy6525         322 YKCYICGNRYATQKYLEEHIRLH  344 (360)
Q Consensus       322 ~~C~~C~~~f~~~~~l~~H~~~h  344 (360)
                      |+|++|++.|.++..|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            56777777777777777776654

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.94  E-value=5.2e-06  Score=61.02  Aligned_cols=71  Identities=21%  Similarity=0.481  Sum_probs=13.4

Q ss_pred             ccccccccCChhHHHHhHhhhcCCCccccccchhhhcCHHHHHHHHhhhcCCcccccccccccCChHHHHHHHHH
Q psy6525         269 CNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEGQDYKCYICGNRYATQKYLEEHIRL  343 (360)
Q Consensus       269 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~  343 (360)
                      |.+|+..|.+...|..|+...++...-    ....+.....+..+++.-....+.|.+|++.|.+...|..||+.
T Consensus         2 C~~C~~~f~~~~~l~~H~~~~H~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~l~~Hm~~   72 (100)
T PF12756_consen    2 CLFCDESFSSVDDLLQHMKKKHGFDIP----DQKYLVDPNRLLNYLRKKVKESFRCPYCNKTFRSREALQEHMRS   72 (100)
T ss_dssp             ---------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccc----cccccccccccccccccccCCCCCCCccCCCCcCHHHHHHHHcC
Confidence            555555555555555555443321100    11111222333333332222345566666666666666666554

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.93  E-value=1.5e-05  Score=51.04  Aligned_cols=49  Identities=16%  Similarity=0.139  Sum_probs=26.0

Q ss_pred             eecccchhccCChHHHHHHHhhccCCCCCccccccccccccChHHHHHHHHH
Q psy6525         100 VLCYICDEILKDIDDLRYHGLLHATPLGTQFQCNVCFLMLNNRCYTRFHLLK  151 (360)
Q Consensus       100 ~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~  151 (360)
                      |.|++|++ .-+...|..|....|....+.+.||+|...+.  ..|..|+..
T Consensus         3 f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~   51 (54)
T PF05605_consen    3 FTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNS   51 (54)
T ss_pred             cCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHH
Confidence            56666666 34455666665554444344566666655333  245555543

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.84  E-value=8.2e-06  Score=42.17  Aligned_cols=22  Identities=45%  Similarity=1.100  Sum_probs=12.5

Q ss_pred             cccccchhhhcCHHHHHHHHhh
Q psy6525         295 YQCAMCKKQYASKKMLEKHIRR  316 (360)
Q Consensus       295 ~~C~~C~~~f~~~~~L~~H~~~  316 (360)
                      |.|+.|++.|.+...|..|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            4555555555555555555554

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.77  E-value=1.8e-05  Score=41.27  Aligned_cols=24  Identities=33%  Similarity=0.941  Sum_probs=13.2

Q ss_pred             ccccccccccCChHHHHHHHHHhC
Q psy6525         322 YKCYICGNRYATQKYLEEHIRLHQ  345 (360)
Q Consensus       322 ~~C~~C~~~f~~~~~l~~H~~~h~  345 (360)
                      |.|++|++.|.+...|..|+++|+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            456666666666666666666553

...

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.69  E-value=2.7e-05  Score=57.18  Aligned_cols=22  Identities=41%  Similarity=0.753  Sum_probs=0.0

Q ss_pred             cccccccccCHHHHHHHHHHcC
Q psy6525         159 CDLCSRTFNSQSYLQQHKKHDH  180 (360)
Q Consensus       159 C~~C~~~f~~~~~l~~H~~~~h  180 (360)
                      |.+|+..|.+...|..||...|
T Consensus         2 C~~C~~~f~~~~~l~~H~~~~H   23 (100)
T PF12756_consen    2 CLFCDESFSSVDDLLQHMKKKH   23 (100)
T ss_dssp             ----------------------
T ss_pred             cccccccccccccccccccccc
Confidence            4444444444444444444433

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.64  E-value=2.7e-05  Score=41.95  Aligned_cols=25  Identities=32%  Similarity=0.699  Sum_probs=15.7

Q ss_pred             cccccccccccCChHHHHHHHHHhC
Q psy6525         321 DYKCYICGNRYATQKYLEEHIRLHQ  345 (360)
Q Consensus       321 ~~~C~~C~~~f~~~~~l~~H~~~h~  345 (360)
                      ||+|..|++.|.+...|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            4566666666666666666666554

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.61  E-value=3.8e-05  Score=39.98  Aligned_cols=23  Identities=43%  Similarity=0.996  Sum_probs=13.6

Q ss_pred             cccccchhhhcCHHHHHHHHhhh
Q psy6525         295 YQCAMCKKQYASKKMLEKHIRRH  317 (360)
Q Consensus       295 ~~C~~C~~~f~~~~~L~~H~~~h  317 (360)
                      |.|++|++.|.+...|..|+++|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            45666666666666666666654

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.50  E-value=4.6e-05  Score=41.05  Aligned_cols=25  Identities=32%  Similarity=0.689  Sum_probs=16.1

Q ss_pred             ccccccchhhhcCHHHHHHHHhhhc
Q psy6525         294 KYQCAMCKKQYASKKMLEKHIRRHE  318 (360)
Q Consensus       294 ~~~C~~C~~~f~~~~~L~~H~~~h~  318 (360)
                      ||.|..|++.|.+...|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            4666666666666666666666553

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.40  E-value=4.2e-05  Score=65.27  Aligned_cols=27  Identities=30%  Similarity=0.670  Sum_probs=22.5

Q ss_pred             Cccccccc--ccccccCHHHHHHHHHHcC
Q psy6525         154 WVRFKCDL--CSRTFNSQSYLQQHKKHDH  180 (360)
Q Consensus       154 ~~~~~C~~--C~~~f~~~~~l~~H~~~~h  180 (360)
                      .+||+|++  |+|.|.+...|+.|+..-|
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH  375 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGH  375 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccc
Confidence            57888887  8899999999998887755

>KOG1146|consensus

Probab=97.32  E-value=4.1e-05  Score=77.25  Aligned_cols=50  Identities=18%  Similarity=0.263  Sum_probs=35.9

Q ss_pred             Cccccccchhhhc-CHHHHHHHHhhh-------cCCcccccccccccCChHHHHHHHH
Q psy6525         293 NKYQCAMCKKQYA-SKKMLEKHIRRH-------EGQDYKCYICGNRYATQKYLEEHIR  342 (360)
Q Consensus       293 ~~~~C~~C~~~f~-~~~~L~~H~~~h-------~~~~~~C~~C~~~f~~~~~l~~H~~  342 (360)
                      +.+.|-+|..--. +...|+.|..+-       .|..|.|.+|.+.-..+.++..|.+
T Consensus       733 k~~~civcd~~st~~l~~l~~h~~~~rs~ke~v~g~~~~c~l~~y~t~~kanfqlh~K  790 (1406)
T KOG1146|consen  733 KVFDCIVCDVFSTDRLDQLWFHNTRERSRKEQVPGDVPSCKLKPYATNTKANFQLHNK  790 (1406)
T ss_pred             HHHHHhhhhhhhhhhHHHHhhcchhhhhhhhcccCCCCcceecccccccchhhhhhcc
Confidence            3477888876443 566777786543       2356899999988888888888854

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.29  E-value=6.1e-05  Score=64.29  Aligned_cols=51  Identities=29%  Similarity=0.751  Sum_probs=41.0

Q ss_pred             CCcccccc--chhhhcCHHHHHHHHhh-h-------------------cCCcccccccccccCChHHHHHHHH
Q psy6525         292 PNKYQCAM--CKKQYASKKMLEKHIRR-H-------------------EGQDYKCYICGNRYATQKYLEEHIR  342 (360)
Q Consensus       292 ~~~~~C~~--C~~~f~~~~~L~~H~~~-h-------------------~~~~~~C~~C~~~f~~~~~l~~H~~  342 (360)
                      ++||+|++  |.|.|.+...|+.|+.- |                   ..+||+|++|+|.+++...|+.|+.
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceeccc
Confidence            58888877  88888888888888763 3                   1258999999999999999998864

>KOG2231|consensus

Probab=97.09  E-value=0.001  Score=63.86  Aligned_cols=23  Identities=30%  Similarity=0.686  Sum_probs=13.6

Q ss_pred             ccccccccccCHHHHHHHHHHcCC
Q psy6525         158 KCDLCSRTFNSQSYLQQHKKHDHE  181 (360)
Q Consensus       158 ~C~~C~~~f~~~~~l~~H~~~~h~  181 (360)
                      .|..| -.|.+...|+.|+...|.
T Consensus       117 ~~~~c-~~~~s~~~Lk~H~~~~H~  139 (669)
T KOG2231|consen  117 ECLHC-TEFKSVENLKNHMRDQHK  139 (669)
T ss_pred             CCccc-cchhHHHHHHHHHHHhhh
Confidence            45566 556666666666655443

>smart00355 ZnF_C2H2 zinc finger

Probab=97.05  E-value=0.00051  Score=36.21  Aligned_cols=24  Identities=38%  Similarity=0.908  Sum_probs=14.1

Q ss_pred             ccccccccccCChHHHHHHHHHhC
Q psy6525         322 YKCYICGNRYATQKYLEEHIRLHQ  345 (360)
Q Consensus       322 ~~C~~C~~~f~~~~~l~~H~~~h~  345 (360)
                      |+|+.|++.|.....|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            356666666666666666665543

>KOG2231|consensus

Probab=97.02  E-value=0.0017  Score=62.45  Aligned_cols=97  Identities=24%  Similarity=0.484  Sum_probs=59.0

Q ss_pred             ccCChHHHHHHHhhccCCCCCcccccccc---------ccccChHHHHHHHHHcCC------cccccccccccccCHHHH
Q psy6525         108 ILKDIDDLRYHGLLHATPLGTQFQCNVCF---------LMLNNRCYTRFHLLKHNW------VRFKCDLCSRTFNSQSYL  172 (360)
Q Consensus       108 ~f~~~~~l~~H~~~~~~~~~~~~~C~~C~---------~~f~~~~~l~~H~~~h~~------~~~~C~~C~~~f~~~~~l  172 (360)
                      .|+++..|+.|+...|.    .+.|.+|-         ....++..|..|+..-..      ..-.|..|...|-....|
T Consensus       123 ~~~s~~~Lk~H~~~~H~----~~~c~lC~~~~kif~~e~k~Yt~~el~~h~~~gd~d~~s~rGhp~C~~C~~~fld~~el  198 (669)
T KOG2231|consen  123 EFKSVENLKNHMRDQHK----LHLCSLCLQNLKIFINERKLYTRAELNLHLMFGDPDDESCRGHPLCKFCHERFLDDDEL  198 (669)
T ss_pred             chhHHHHHHHHHHHhhh----hhccccccccceeeeeeeehehHHHHHHHHhcCCCccccccCCccchhhhhhhccHHHH
Confidence            33477788888765443    35555552         223455566666654321      124677788778777888


Q ss_pred             HHHHHHcCCCceeecccc------cccccChhHHHHHHHhcCCCCCcCc
Q psy6525         173 QQHKKHDHEGVKYKCKEC------GKCYTQNTNLKQHMLSHKGIFFICF  215 (360)
Q Consensus       173 ~~H~~~~h~~~~~~C~~C------~~~f~~~~~l~~H~~~h~~~~~~C~  215 (360)
                      ..|++..|    |.|..|      +..|.....|..|.+.++   |.|.
T Consensus       199 ~rH~~~~h----~~chfC~~~~~~neyy~~~~dLe~HfR~~H---flCE  240 (669)
T KOG2231|consen  199 YRHLRFDH----EFCHFCDYKTGQNEYYNDYDDLEEHFRKGH---FLCE  240 (669)
T ss_pred             HHhhccce----eheeecCcccccchhcccchHHHHHhhhcC---cccc
Confidence            87777755    445555      344666777777777765   4555

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.93  E-value=0.00053  Score=35.64  Aligned_cols=24  Identities=29%  Similarity=0.659  Sum_probs=13.6

Q ss_pred             ccccccccccCChHHHHHHHHHhCC
Q psy6525         322 YKCYICGNRYATQKYLEEHIRLHQG  346 (360)
Q Consensus       322 ~~C~~C~~~f~~~~~l~~H~~~h~g  346 (360)
                      |+|+.|+.... ...|..|++.|+|
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H~   24 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHHP   24 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHHS
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhCc
Confidence            45666666665 6666666666543

>smart00355 ZnF_C2H2 zinc finger

Probab=96.83  E-value=0.0011  Score=34.88  Aligned_cols=23  Identities=43%  Similarity=0.957  Sum_probs=15.1

Q ss_pred             cccccchhhhcCHHHHHHHHhhh
Q psy6525         295 YQCAMCKKQYASKKMLEKHIRRH  317 (360)
Q Consensus       295 ~~C~~C~~~f~~~~~L~~H~~~h  317 (360)
                      |.|+.|++.|.+...|..|++.|
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHh
Confidence            45666666666666666666654

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.76  E-value=0.00062  Score=41.49  Aligned_cols=28  Identities=25%  Similarity=0.504  Sum_probs=15.7

Q ss_pred             CcccccccccccCChHHHHHHHHHhCCC
Q psy6525         320 QDYKCYICGNRYATQKYLEEHIRLHQGH  347 (360)
Q Consensus       320 ~~~~C~~C~~~f~~~~~l~~H~~~h~g~  347 (360)
                      .|-.|++|+..+.+..+|++|+.++|+.
T Consensus        23 ~PatCP~C~a~~~~srnLrRHle~~H~~   50 (54)
T PF09237_consen   23 QPATCPICGAVIRQSRNLRRHLEIRHFK   50 (54)
T ss_dssp             --EE-TTT--EESSHHHHHHHHHHHTTT
T ss_pred             CCCCCCcchhhccchhhHHHHHHHHhcc
Confidence            4666777777777777777777666553

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=96.70  E-value=0.0021  Score=55.85  Aligned_cols=127  Identities=19%  Similarity=0.353  Sum_probs=79.2

Q ss_pred             ceeccc--chhccCChHHHHHHHhhccCCCCCcccccccc---ccc------cChHHHHHHHHHcCC-----cccccccc
Q psy6525          99 NVLCYI--CDEILKDIDDLRYHGLLHATPLGTQFQCNVCF---LML------NNRCYTRFHLLKHNW-----VRFKCDLC  162 (360)
Q Consensus        99 ~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~C~~C~---~~f------~~~~~l~~H~~~h~~-----~~~~C~~C  162 (360)
                      .|.|+.  |......+..|..|....|+    .+.|.+|-   +.|      .+...|+.|...-..     ..-.|..|
T Consensus       151 ~F~CP~skc~~~C~~~k~lk~H~K~~H~----~~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GFKGHP~C~FC  226 (493)
T COG5236         151 SFKCPKSKCHRRCGSLKELKKHYKAQHG----FVLCSECIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGFKGHPLCIFC  226 (493)
T ss_pred             HhcCCchhhhhhhhhHHHHHHHHHhhcC----cEEhHhhhcCcccCccceeeeecccccccccCCccccCcCCCchhhhc
Confidence            367875  77777778899999887665    36787772   223      234455555443221     12358888


Q ss_pred             cccccCHHHHHHHHHHcCCCceeeccccccc-------ccChhHHHHHHHhcCCCCCcCcc--cc----ccccCHHHHHH
Q psy6525         163 SRTFNSQSYLQQHKKHDHEGVKYKCKECGKC-------YTQNTNLKQHMLSHKGIFFICFH--CN----KNFTHRALLVR  229 (360)
Q Consensus       163 ~~~f~~~~~l~~H~~~~h~~~~~~C~~C~~~-------f~~~~~l~~H~~~h~~~~~~C~~--C~----~~f~~~~~l~~  229 (360)
                      ...|-+...|.+|++..|.    .|.+|++.       |.+...|..|.+.-+   |.|..  |-    .+|.....|..
T Consensus       227 ~~~FYdDDEL~~HcR~~HE----~ChICD~v~p~~~QYFK~Y~~Le~HF~~~h---y~ct~qtc~~~k~~vf~~~~el~~  299 (493)
T COG5236         227 KIYFYDDDELRRHCRLRHE----ACHICDMVGPIRYQYFKSYEDLEAHFRNAH---YCCTFQTCRVGKCYVFPYHTELLE  299 (493)
T ss_pred             cceecChHHHHHHHHhhhh----hhhhhhccCccchhhhhCHHHHHHHhhcCc---eEEEEEEEecCcEEEeccHHHHHH
Confidence            8888888888888887664    35555433       667777777766532   33332  21    35677777777


Q ss_pred             HHhhcCC
Q psy6525         230 HMQKHSS  236 (360)
Q Consensus       230 H~~~h~~  236 (360)
                      |+..-|+
T Consensus       300 h~~~~h~  306 (493)
T COG5236         300 HLTRFHK  306 (493)
T ss_pred             HHHHHhh
Confidence            7665443

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.54  E-value=0.0013  Score=34.42  Aligned_cols=22  Identities=27%  Similarity=0.818  Sum_probs=15.0

Q ss_pred             ccccccccccCChHHHHHHHHH
Q psy6525         322 YKCYICGNRYATQKYLEEHIRL  343 (360)
Q Consensus       322 ~~C~~C~~~f~~~~~l~~H~~~  343 (360)
                      |.|.+|++.|.+...|..|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            4577777777777777777654

>PRK04860 hypothetical protein; Provisional

Probab=96.44  E-value=0.0016  Score=51.68  Aligned_cols=34  Identities=26%  Similarity=0.512  Sum_probs=17.4

Q ss_pred             cccccccccccCChHHHHHHHHHhCCC-CccCCCccccc
Q psy6525         321 DYKCYICGNRYATQKYLEEHIRLHQGH-TYMCNAKFSFN  358 (360)
Q Consensus       321 ~~~C~~C~~~f~~~~~l~~H~~~h~g~-~~~C~~c~~~f  358 (360)
                      +|.|. |+.   ....+..|.++|+|+ +|.|..|+..|
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l  153 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETL  153 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCcee
Confidence            45554 544   444455555555554 45555555544

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.43  E-value=0.0025  Score=38.87  Aligned_cols=19  Identities=21%  Similarity=0.670  Sum_probs=5.9

Q ss_pred             ccccchhhhcCHHHHHHHH
Q psy6525         296 QCAMCKKQYASKKMLEKHI  314 (360)
Q Consensus       296 ~C~~C~~~f~~~~~L~~H~  314 (360)
                      .|++|+..+.+..+|++|+
T Consensus        26 tCP~C~a~~~~srnLrRHl   44 (54)
T PF09237_consen   26 TCPICGAVIRQSRNLRRHL   44 (54)
T ss_dssp             E-TTT--EESSHHHHHHHH
T ss_pred             CCCcchhhccchhhHHHHH
Confidence            3333333333333333333

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>KOG2785|consensus

Probab=96.43  E-value=0.0086  Score=53.12  Aligned_cols=23  Identities=26%  Similarity=0.520  Sum_probs=19.7

Q ss_pred             ccccccccccccChHHHHHHHHH
Q psy6525         129 QFQCNVCFLMLNNRCYTRFHLLK  151 (360)
Q Consensus       129 ~~~C~~C~~~f~~~~~l~~H~~~  151 (360)
                      -|.|.-|...|.+....+.|+++
T Consensus         3 ~ftC~tC~v~F~~ad~Qr~HyKS   25 (390)
T KOG2785|consen    3 GFTCNTCNVEFDDADEQRAHYKS   25 (390)
T ss_pred             cceeeceeeeeccHHHHHHHhhh
Confidence            48899999999998888888865

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.39  E-value=0.0021  Score=33.35  Aligned_cols=23  Identities=35%  Similarity=0.873  Sum_probs=12.0

Q ss_pred             cccccchhhhcCHHHHHHHHhhhc
Q psy6525         295 YQCAMCKKQYASKKMLEKHIRRHE  318 (360)
Q Consensus       295 ~~C~~C~~~f~~~~~L~~H~~~h~  318 (360)
                      |+|+.|+.... ...|..|++.|+
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            45666665555 556666665543

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.23  E-value=0.0025  Score=33.35  Aligned_cols=20  Identities=35%  Similarity=0.934  Sum_probs=8.6

Q ss_pred             ccccchhhhcCHHHHHHHHh
Q psy6525         296 QCAMCKKQYASKKMLEKHIR  315 (360)
Q Consensus       296 ~C~~C~~~f~~~~~L~~H~~  315 (360)
                      .|++|++.|.+...|..|++
T Consensus         2 ~C~~C~~~f~s~~~~~~H~~   21 (25)
T PF12874_consen    2 YCDICNKSFSSENSLRQHLR   21 (25)
T ss_dssp             EETTTTEEESSHHHHHHHHT
T ss_pred             CCCCCCCCcCCHHHHHHHHC
Confidence            34444444444444444443

>PRK04860 hypothetical protein; Provisional

Probab=96.13  E-value=0.0029  Score=50.24  Aligned_cols=26  Identities=15%  Similarity=0.415  Sum_probs=12.0

Q ss_pred             hhHHHHhHhhhcCCCccccccchhhh
Q psy6525         279 KRSLQDHMQRHEEPNKYQCAMCKKQY  304 (360)
Q Consensus       279 ~~~l~~H~~~h~~~~~~~C~~C~~~f  304 (360)
                      ...+++|.++|+++++|.|..|+..|
T Consensus       128 ~~~~rrH~ri~~g~~~YrC~~C~~~l  153 (160)
T PRK04860        128 QLTVRRHNRVVRGEAVYRCRRCGETL  153 (160)
T ss_pred             eCHHHHHHHHhcCCccEECCCCCcee
Confidence            33444444444444444444444444

>KOG2785|consensus

Probab=96.11  E-value=0.018  Score=51.14  Aligned_cols=50  Identities=22%  Similarity=0.523  Sum_probs=36.5

Q ss_pred             ccccccchhhhcCHHHHHHHHhhhcC------------------------Ccccccccc---cccCChHHHHHHHHH
Q psy6525         294 KYQCAMCKKQYASKKMLEKHIRRHEG------------------------QDYKCYICG---NRYATQKYLEEHIRL  343 (360)
Q Consensus       294 ~~~C~~C~~~f~~~~~L~~H~~~h~~------------------------~~~~C~~C~---~~f~~~~~l~~H~~~  343 (360)
                      |-.|-.|++.+.+...-..||..+||                        ..|.|-.|+   +.|.+..+.+.||..
T Consensus       166 Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~HM~~  242 (390)
T KOG2785|consen  166 PTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAHMRD  242 (390)
T ss_pred             CcceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHHHhh
Confidence            45566677777776666677766654                        127788888   888999999999864

>KOG2482|consensus

Probab=95.76  E-value=0.012  Score=51.28  Aligned_cols=137  Identities=18%  Similarity=0.300  Sum_probs=78.6

Q ss_pred             Cceecccchhcc-CChHHHHHHHh-hccCCCCC-------------------ccccccccccccChHHHHHHHHHcCCc-
Q psy6525          98 KNVLCYICDEIL-KDIDDLRYHGL-LHATPLGT-------------------QFQCNVCFLMLNNRCYTRFHLLKHNWV-  155 (360)
Q Consensus        98 ~~~~C~~C~~~f-~~~~~l~~H~~-~~~~~~~~-------------------~~~C~~C~~~f~~~~~l~~H~~~h~~~-  155 (360)
                      ....|-.|...+ .+++....|+. .|.-..+.                   .+.|-.|.+.|.++..|+.||+.-+.+ 
T Consensus       143 fslqClFCn~e~lgnRs~~l~Hlf~~H~lniGlpDniVyvnelLehLkekL~r~~CLyCekifrdkntLkeHMrkK~Hrr  222 (423)
T KOG2482|consen  143 FSLQCLFCNNEGLGNRSEILEHLFHVHGLNIGLPDNIVYVNELLEHLKEKLERLRCLYCEKIFRDKNTLKEHMRKKRHRR  222 (423)
T ss_pred             eeeEEEEecchhcccHHHHHHHHHHHhhhccCCCcceeeHHHHHHHHHHHHhhheeeeeccccCCcHHHHHHHHhccCcc
Confidence            346799998888 55666777764 33322221                   357888888888888888888764211 


Q ss_pred             --c-------c-c--cccccccccCH-HHHHHHHHHc-------------CCCc--eeecccccccccChhHHHHHHHhc
Q psy6525         156 --R-------F-K--CDLCSRTFNSQ-SYLQQHKKHD-------------HEGV--KYKCKECGKCYTQNTNLKQHMLSH  207 (360)
Q Consensus       156 --~-------~-~--C~~C~~~f~~~-~~l~~H~~~~-------------h~~~--~~~C~~C~~~f~~~~~l~~H~~~h  207 (360)
                        |       | .  -..=+++.... ..+.+-....             ++..  ...|-.|.....+...|..||...
T Consensus       223 inPknreYDkfyiINY~ev~ks~t~~~~e~dret~~d~~E~D~~wsDw~ed~a~a~~v~CLfC~~~~en~~~l~eHmk~v  302 (423)
T KOG2482|consen  223 INPKNREYDKFYIINYLEVGKSWTIVHSEDDRETNEDINETDDTWSDWNEDDAEALSVVCLFCTNFYENPVFLFEHMKIV  302 (423)
T ss_pred             cCCCccccceEEEEeHhhcCCccchhhhhhhhhhhccccccccchhhhhcCCCCccceEEEeeccchhhHHHHHHHHHHH
Confidence              1       0 0  00011111100 0000000000             0111  147888888888788888887753


Q ss_pred             CC----------------------------CCCcCccccccccCHHHHHHHHhhc
Q psy6525         208 KG----------------------------IFFICFHCNKNFTHRALLVRHMQKH  234 (360)
Q Consensus       208 ~~----------------------------~~~~C~~C~~~f~~~~~l~~H~~~h  234 (360)
                      +.                            ....|-.|...|.....|..||..+
T Consensus       303 He~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~hm~e~  357 (423)
T KOG2482|consen  303 HEFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGLLIHMVED  357 (423)
T ss_pred             HHhhHHhhccccccchhhhhhHHHHHHHHhhccccccccccccCcchhhhhcccc
Confidence            21                            0245888999999999999998754

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=95.70  E-value=0.021  Score=49.79  Aligned_cols=127  Identities=26%  Similarity=0.479  Sum_probs=78.8

Q ss_pred             cccccc--ccccccCHHHHHHHHHHcCCCceeecccccc---ccc------ChhHHHHHHHhcCCC-----CCcCccccc
Q psy6525         156 RFKCDL--CSRTFNSQSYLQQHKKHDHEGVKYKCKECGK---CYT------QNTNLKQHMLSHKGI-----FFICFHCNK  219 (360)
Q Consensus       156 ~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~C~~C~~---~f~------~~~~l~~H~~~h~~~-----~~~C~~C~~  219 (360)
                      .|.|+.  |..+......|..|.+..|+.  +.|.+|-.   .|.      +...|..|...-...     --.|..|..
T Consensus       151 ~F~CP~skc~~~C~~~k~lk~H~K~~H~~--~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GFKGHP~C~FC~~  228 (493)
T COG5236         151 SFKCPKSKCHRRCGSLKELKKHYKAQHGF--VLCSECIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGFKGHPLCIFCKI  228 (493)
T ss_pred             HhcCCchhhhhhhhhHHHHHHHHHhhcCc--EEhHhhhcCcccCccceeeeecccccccccCCccccCcCCCchhhhccc
Confidence            388877  777777788899999887753  66777632   232      334555554432111     136888888


Q ss_pred             cccCHHHHHHHHhhcCCCCcccCCCC----CccCCHHHHHHHHHHhcCCCcccccc--cc----cccCChhHHHHhHhh
Q psy6525         220 NFTHRALLVRHMQKHSSERFKCDLCG----KVTPYYQHYLRHMRIHQGLEVHECNL--CA----KLFACKRSLQDHMQR  288 (360)
Q Consensus       220 ~f~~~~~l~~H~~~h~~~~~~C~~C~----~~f~~~~~l~~H~~~h~~~~~~~C~~--C~----~~f~~~~~l~~H~~~  288 (360)
                      .|..-..|..|++..|..-+.|+.-+    .-|.+...|..|.+.-+    |.|.+  |.    ..|.....|..|+..
T Consensus       229 ~FYdDDEL~~HcR~~HE~ChICD~v~p~~~QYFK~Y~~Le~HF~~~h----y~ct~qtc~~~k~~vf~~~~el~~h~~~  303 (493)
T COG5236         229 YFYDDDELRRHCRLRHEACHICDMVGPIRYQYFKSYEDLEAHFRNAH----YCCTFQTCRVGKCYVFPYHTELLEHLTR  303 (493)
T ss_pred             eecChHHHHHHHHhhhhhhhhhhccCccchhhhhCHHHHHHHhhcCc----eEEEEEEEecCcEEEeccHHHHHHHHHH
Confidence            88888888888887776534443322    23666677777765432    44433  32    356677777777654

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.56  E-value=0.0034  Score=33.57  Aligned_cols=21  Identities=19%  Similarity=0.763  Sum_probs=13.0

Q ss_pred             ccccccccccCChHHHHHHHH
Q psy6525         322 YKCYICGNRYATQKYLEEHIR  342 (360)
Q Consensus       322 ~~C~~C~~~f~~~~~l~~H~~  342 (360)
                      |.|..|++.|.+...|..|++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~   22 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMK   22 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTT
T ss_pred             CCcccCCCCcCCHHHHHHHHc
Confidence            456666666666666666654

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.54  E-value=0.0054  Score=32.79  Aligned_cols=22  Identities=32%  Similarity=0.788  Sum_probs=12.6

Q ss_pred             ccccccccccCChhHHHHhHhh
Q psy6525         267 HECNLCAKLFACKRSLQDHMQR  288 (360)
Q Consensus       267 ~~C~~C~~~f~~~~~l~~H~~~  288 (360)
                      |.|..|++.|.+...|..|+++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            4555666666666666555543

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>KOG2482|consensus

Probab=95.34  E-value=0.062  Score=46.98  Aligned_cols=147  Identities=20%  Similarity=0.306  Sum_probs=91.2

Q ss_pred             HHHHHHhhccCCCCCccccccccccc-cChHHHHHHHH-HcC---Cc-------------------ccccccccccccCH
Q psy6525         114 DLRYHGLLHATPLGTQFQCNVCFLML-NNRCYTRFHLL-KHN---WV-------------------RFKCDLCSRTFNSQ  169 (360)
Q Consensus       114 ~l~~H~~~~~~~~~~~~~C~~C~~~f-~~~~~l~~H~~-~h~---~~-------------------~~~C~~C~~~f~~~  169 (360)
                      .|+.|++.-.+ .....+|-.|+..+ .+++....|+. .|+   ..                   .+.|-.|.+.|+++
T Consensus       130 aLeqqQ~Ered-t~fslqClFCn~e~lgnRs~~l~Hlf~~H~lniGlpDniVyvnelLehLkekL~r~~CLyCekifrdk  208 (423)
T KOG2482|consen  130 ALEQQQKERED-TIFSLQCLFCNNEGLGNRSEILEHLFHVHGLNIGLPDNIVYVNELLEHLKEKLERLRCLYCEKIFRDK  208 (423)
T ss_pred             HHHHHHHHhcC-CeeeeEEEEecchhcccHHHHHHHHHHHhhhccCCCcceeeHHHHHHHHHHHHhhheeeeeccccCCc
Confidence            34455543322 24567899998765 45677777774 343   11                   37899999999999


Q ss_pred             HHHHHHHHHcCCCc--e--------eecc--cccccccCh-hHHH-----HHHH---------hcCCC--CCcCcccccc
Q psy6525         170 SYLQQHKKHDHEGV--K--------YKCK--ECGKCYTQN-TNLK-----QHML---------SHKGI--FFICFHCNKN  220 (360)
Q Consensus       170 ~~l~~H~~~~h~~~--~--------~~C~--~C~~~f~~~-~~l~-----~H~~---------~h~~~--~~~C~~C~~~  220 (360)
                      ..|+.||+.....+  |        |.=.  .=|++.... +.+.     .+..         .+...  ...|-.|...
T Consensus       209 ntLkeHMrkK~HrrinPknreYDkfyiINY~ev~ks~t~~~~e~dret~~d~~E~D~~wsDw~ed~a~a~~v~CLfC~~~  288 (423)
T KOG2482|consen  209 NTLKEHMRKKRHRRINPKNREYDKFYIINYLEVGKSWTIVHSEDDRETNEDINETDDTWSDWNEDDAEALSVVCLFCTNF  288 (423)
T ss_pred             HHHHHHHHhccCcccCCCccccceEEEEeHhhcCCccchhhhhhhhhhhccccccccchhhhhcCCCCccceEEEeeccc
Confidence            99999998643221  1        1110  011211110 0010     0000         00111  2589999999


Q ss_pred             ccCHHHHHHHHhhcCCC----------------------------CcccCCCCCccCCHHHHHHHHHHh
Q psy6525         221 FTHRALLVRHMQKHSSE----------------------------RFKCDLCGKVTPYYQHYLRHMRIH  261 (360)
Q Consensus       221 f~~~~~l~~H~~~h~~~----------------------------~~~C~~C~~~f~~~~~l~~H~~~h  261 (360)
                      ..+...|..||+..|.-                            ...|-.|...|.....|..||..+
T Consensus       289 ~en~~~l~eHmk~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~hm~e~  357 (423)
T KOG2482|consen  289 YENPVFLFEHMKIVHEFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGLLIHMVED  357 (423)
T ss_pred             hhhHHHHHHHHHHHHHhhHHhhccccccchhhhhhHHHHHHHHhhccccccccccccCcchhhhhcccc
Confidence            99999999999865520                            135889999999999999998743

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=94.79  E-value=0.025  Score=29.58  Aligned_cols=21  Identities=33%  Similarity=0.849  Sum_probs=13.0

Q ss_pred             ccccccccccCChHHHHHHHHH
Q psy6525         322 YKCYICGNRYATQKYLEEHIRL  343 (360)
Q Consensus       322 ~~C~~C~~~f~~~~~l~~H~~~  343 (360)
                      ..|+.||+.| ..+.|..|+++
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            3566777776 55566666653

>KOG1146|consensus

Probab=94.59  E-value=0.004  Score=63.59  Aligned_cols=24  Identities=29%  Similarity=0.393  Sum_probs=16.5

Q ss_pred             CCCcCccccccccCHHHHHHHHhh
Q psy6525         210 IFFICFHCNKNFTHRALLVRHMQK  233 (360)
Q Consensus       210 ~~~~C~~C~~~f~~~~~l~~H~~~  233 (360)
                      .+|.|..|...+....+|..|++.
T Consensus       517 ~p~~C~~C~~stttng~LsihlqS  540 (1406)
T KOG1146|consen  517 KPYPCRACNYSTTTNGNLSIHLQS  540 (1406)
T ss_pred             CcccceeeeeeeecchHHHHHHHH
Confidence            466777777777777777777653

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=93.66  E-value=0.051  Score=28.36  Aligned_cols=18  Identities=28%  Similarity=0.737  Sum_probs=8.1

Q ss_pred             cccccccccCChhHHHHhH
Q psy6525         268 ECNLCAKLFACKRSLQDHM  286 (360)
Q Consensus       268 ~C~~C~~~f~~~~~l~~H~  286 (360)
                      .|+.||+.| ....|.+|+
T Consensus         4 ~C~~CgR~F-~~~~l~~H~   21 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHE   21 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHH
Confidence            344444444 334444443

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=93.34  E-value=0.014  Score=54.96  Aligned_cols=116  Identities=24%  Similarity=0.449  Sum_probs=65.6

Q ss_pred             CcccCCCCCccCCHHHHHHHHH--HhcCC--Cccccc--ccccccCChhHHHHhHhhhcCCCccc---------------
Q psy6525         238 RFKCDLCGKVTPYYQHYLRHMR--IHQGL--EVHECN--LCAKLFACKRSLQDHMQRHEEPNKYQ---------------  296 (360)
Q Consensus       238 ~~~C~~C~~~f~~~~~l~~H~~--~h~~~--~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~---------------  296 (360)
                      ++.|..|...|.....|..|.+  .|.++  +++.|+  .|++.|.+...+..|...|.+..++.               
T Consensus       289 ~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  368 (467)
T COG5048         289 PIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLNSSSKFSPLLN  368 (467)
T ss_pred             CCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCccccccccCccccccccC
Confidence            3455555555555555555555  45555  555555  45555555555555555554433322               


Q ss_pred             --------------------ccc--chhhhcCHHHHHHHHhhhcC---CcccccccccccCChHHHHHHHHHhCCC-Ccc
Q psy6525         297 --------------------CAM--CKKQYASKKMLEKHIRRHEG---QDYKCYICGNRYATQKYLEEHIRLHQGH-TYM  350 (360)
Q Consensus       297 --------------------C~~--C~~~f~~~~~L~~H~~~h~~---~~~~C~~C~~~f~~~~~l~~H~~~h~g~-~~~  350 (360)
                                          +..  |...+.+...+..|...|..   ..+.+..|.+.|.....+..|++.|.-. +..
T Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  448 (467)
T COG5048         369 NEPPQSLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLIPHKKIHTNHAPLL  448 (467)
T ss_pred             CCCccchhhccCccCCccccccccchhhhhccccccccccccccccCCcCCCCCcchhhccCcccccccccccccCCcee
Confidence                                211  44444444445555444433   2466778888888888888888887766 333


Q ss_pred             CCC
Q psy6525         351 CNA  353 (360)
Q Consensus       351 C~~  353 (360)
                      |..
T Consensus       449 ~~~  451 (467)
T COG5048         449 CSI  451 (467)
T ss_pred             ecc
Confidence            433

>smart00451 ZnF_U1 U1-like zinc finger

Probab=92.96  E-value=0.066  Score=30.42  Aligned_cols=22  Identities=18%  Similarity=0.683  Sum_probs=16.5

Q ss_pred             cccccccccccCChHHHHHHHH
Q psy6525         321 DYKCYICGNRYATQKYLEEHIR  342 (360)
Q Consensus       321 ~~~C~~C~~~f~~~~~l~~H~~  342 (360)
                      +|.|.+|++.|.+...+..|++
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHC
Confidence            4677888888887777777765

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG4173|consensus

Probab=92.45  E-value=0.13  Score=41.71  Aligned_cols=78  Identities=18%  Similarity=0.391  Sum_probs=59.1

Q ss_pred             Cceeccc--chhccCChHHHHHHHhhccCCCCCccccccccccccChHHHHHHHHHcC-----------Cccccccc--c
Q psy6525          98 KNVLCYI--CDEILKDIDDLRYHGLLHATPLGTQFQCNVCFLMLNNRCYTRFHLLKHN-----------WVRFKCDL--C  162 (360)
Q Consensus        98 ~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~-----------~~~~~C~~--C  162 (360)
                      ..+.|.+  |...|........|...-|+     -.|.+|.+.|.+...|..|+...+           ...|.|-+  |
T Consensus        78 ~~~~cqvagc~~~~d~lD~~E~hY~~~h~-----~sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgC  152 (253)
T KOG4173|consen   78 PAFACQVAGCCQVFDALDDYEHHYHTLHG-----NSCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGC  152 (253)
T ss_pred             ccccccccchHHHHhhhhhHHHhhhhccc-----chhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhh
Confidence            4577886  89999999999999876665     359999999999999999986532           23466754  7


Q ss_pred             cccccCHHHHHHHHHHcC
Q psy6525         163 SRTFNSQSYLQQHKKHDH  180 (360)
Q Consensus       163 ~~~f~~~~~l~~H~~~~h  180 (360)
                      +..|.+...-..||-..|
T Consensus       153 t~KFkT~r~RkdH~I~~H  170 (253)
T KOG4173|consen  153 TEKFKTSRDRKDHMIRMH  170 (253)
T ss_pred             hhhhhhhhhhhhHHHHhc
Confidence            777777777777776555

>smart00451 ZnF_U1 U1-like zinc finger

Probab=92.42  E-value=0.085  Score=29.96  Aligned_cols=23  Identities=17%  Similarity=0.670  Sum_probs=17.7

Q ss_pred             ccccccchhhhcCHHHHHHHHhh
Q psy6525         294 KYQCAMCKKQYASKKMLEKHIRR  316 (360)
Q Consensus       294 ~~~C~~C~~~f~~~~~L~~H~~~  316 (360)
                      +|.|++|++.|.+...+..|++.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            57788888888888888888763

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=91.78  E-value=0.026  Score=53.03  Aligned_cols=49  Identities=20%  Similarity=0.333  Sum_probs=34.0

Q ss_pred             cccccCChhHHHHhHhhhcCCC--ccccccchhhhcCHHHHHHHHhhhcCC
Q psy6525         272 CAKLFACKRSLQDHMQRHEEPN--KYQCAMCKKQYASKKMLEKHIRRHEGQ  320 (360)
Q Consensus       272 C~~~f~~~~~l~~H~~~h~~~~--~~~C~~C~~~f~~~~~L~~H~~~h~~~  320 (360)
                      |...+.....+..|...|...+  .+.+..|.+.+.....+..|++.|...
T Consensus       394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  444 (467)
T COG5048         394 CIRNFKRDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLIPHKKIHTNH  444 (467)
T ss_pred             hhhhhccccccccccccccccCCcCCCCCcchhhccCcccccccccccccC
Confidence            5566666666777766666555  355667888888877787887777664

>KOG2893|consensus

Probab=91.74  E-value=0.06  Score=44.51  Aligned_cols=42  Identities=36%  Similarity=0.691  Sum_probs=23.7

Q ss_pred             ccccccccccCHHHHHHHHHHcCCCceeecccccccccChhHHHHH
Q psy6525         158 KCDLCSRTFNSQSYLQQHKKHDHEGVKYKCKECGKCYTQNTNLKQH  203 (360)
Q Consensus       158 ~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~l~~H  203 (360)
                      .|-.|++.|.+..-|..|++..|    |+|.+|.+..-+--.|..|
T Consensus        12 wcwycnrefddekiliqhqkakh----fkchichkkl~sgpglsih   53 (341)
T KOG2893|consen   12 WCWYCNREFDDEKILIQHQKAKH----FKCHICHKKLFSGPGLSIH   53 (341)
T ss_pred             eeeecccccchhhhhhhhhhhcc----ceeeeehhhhccCCCceee
Confidence            45566666666666666655533    5566666555555455444

>KOG4173|consensus

Probab=89.92  E-value=0.12  Score=41.86  Aligned_cols=76  Identities=21%  Similarity=0.542  Sum_probs=41.0

Q ss_pred             ccccc--ccccccCHHHHHHHHHHcCCCceeecccccccccChhHHHHHHHhcCC-----------CCCcCcc--ccccc
Q psy6525         157 FKCDL--CSRTFNSQSYLQQHKKHDHEGVKYKCKECGKCYTQNTNLKQHMLSHKG-----------IFFICFH--CNKNF  221 (360)
Q Consensus       157 ~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-----------~~~~C~~--C~~~f  221 (360)
                      |.|++  |...|.+...+..|+..-|+.   .|..|.+.|.+...|..|+...+.           ..|.|-.  |+..|
T Consensus        80 ~~cqvagc~~~~d~lD~~E~hY~~~h~~---sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~KF  156 (253)
T KOG4173|consen   80 FACQVAGCCQVFDALDDYEHHYHTLHGN---SCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTEKF  156 (253)
T ss_pred             ccccccchHHHHhhhhhHHHhhhhcccc---hhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhhhh
Confidence            55555  555666666666666555543   366666666666666666544321           1344433  55555


Q ss_pred             cCHHHHHHHHhhcC
Q psy6525         222 THRALLVRHMQKHS  235 (360)
Q Consensus       222 ~~~~~l~~H~~~h~  235 (360)
                      .+...-..|+...|
T Consensus       157 kT~r~RkdH~I~~H  170 (253)
T KOG4173|consen  157 KTSRDRKDHMIRMH  170 (253)
T ss_pred             hhhhhhhhHHHHhc
Confidence            55555555554433

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=89.75  E-value=0.17  Score=28.40  Aligned_cols=6  Identities=50%  Similarity=1.586  Sum_probs=2.3

Q ss_pred             cCCCCC
Q psy6525         241 CDLCGK  246 (360)
Q Consensus       241 C~~C~~  246 (360)
                      |..||.
T Consensus         4 C~~CGy    9 (33)
T cd00350           4 CPVCGY    9 (33)
T ss_pred             CCCCCC
Confidence            333333

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>TIGR00622 ssl1 transcription factor ssl1

Probab=89.42  E-value=0.35  Score=35.57  Aligned_cols=48  Identities=19%  Similarity=0.389  Sum_probs=25.8

Q ss_pred             cccchhhhcCHHHHHHHHhhhcCCcccccccccccCChHHHHHHHHHhC
Q psy6525         297 CAMCKKQYASKKMLEKHIRRHEGQDYKCYICGNRYATQKYLEEHIRLHQ  345 (360)
Q Consensus       297 C~~C~~~f~~~~~L~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~  345 (360)
                      |--|...|........=. .-....|+|+.|...|=-.-++-.|..+|.
T Consensus        58 C~~C~~~f~~~~~~~~~~-~~~~~~y~C~~C~~~FC~dCD~fiHe~Lh~  105 (112)
T TIGR00622        58 CFGCQGPFPKPPVSPFDE-LKDSHRYVCAVCKNVFCVDCDVFVHESLHC  105 (112)
T ss_pred             ccCcCCCCCCcccccccc-cccccceeCCCCCCccccccchhhhhhccC
Confidence            666777666543111000 011135777777777766666666665554

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=89.09  E-value=0.59  Score=34.67  Aligned_cols=25  Identities=32%  Similarity=0.696  Sum_probs=23.3

Q ss_pred             ccc----cccccccCChHHHHHHHHHhCC
Q psy6525         322 YKC----YICGNRYATQKYLEEHIRLHQG  346 (360)
Q Consensus       322 ~~C----~~C~~~f~~~~~l~~H~~~h~g  346 (360)
                      |.|    ..|++...+...|..|++.+||
T Consensus        81 ~~C~~~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   81 YRCQCDPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             eeeecCCCCCCcEeccHHHHHHHHHHhcC
Confidence            889    9999999999999999998886

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>KOG2893|consensus

Probab=88.88  E-value=0.11  Score=43.06  Aligned_cols=46  Identities=24%  Similarity=0.400  Sum_probs=27.4

Q ss_pred             cccccccccChHHHHHHHHHcCCcccccccccccccCHHHHHHHHHHcC
Q psy6525         132 CNVCFLMLNNRCYTRFHLLKHNWVRFKCDLCSRTFNSQSYLQQHKKHDH  180 (360)
Q Consensus       132 C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~~h  180 (360)
                      |=+|++.|.+...|..|++.-   .|+|-+|-+...+--.|..|....|
T Consensus        13 cwycnrefddekiliqhqkak---hfkchichkkl~sgpglsihcmqvh   58 (341)
T KOG2893|consen   13 CWYCNREFDDEKILIQHQKAK---HFKCHICHKKLFSGPGLSIHCMQVH   58 (341)
T ss_pred             eeecccccchhhhhhhhhhhc---cceeeeehhhhccCCCceeehhhhh
Confidence            556666666666666665432   2667777666665666666654444

>TIGR00622 ssl1 transcription factor ssl1

Probab=88.74  E-value=0.39  Score=35.36  Aligned_cols=17  Identities=24%  Similarity=0.374  Sum_probs=8.4

Q ss_pred             ccccccccccccChHHH
Q psy6525         129 QFQCNVCFLMLNNRCYT  145 (360)
Q Consensus       129 ~~~C~~C~~~f~~~~~l  145 (360)
                      |..|++|+...-+...|
T Consensus        15 P~~CpiCgLtLVss~HL   31 (112)
T TIGR00622        15 PVECPICGLTLILSTHL   31 (112)
T ss_pred             CCcCCcCCCEEeccchH
Confidence            45555555555444333

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=88.32  E-value=0.75  Score=34.10  Aligned_cols=25  Identities=40%  Similarity=0.761  Sum_probs=23.0

Q ss_pred             ccc----ccchhhhcCHHHHHHHHhhhcC
Q psy6525         295 YQC----AMCKKQYASKKMLEKHIRRHEG  319 (360)
Q Consensus       295 ~~C----~~C~~~f~~~~~L~~H~~~h~~  319 (360)
                      |.|    ..|++.+.+...+..|++.++|
T Consensus        81 ~~C~~~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   81 YRCQCDPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             eeeecCCCCCCcEeccHHHHHHHHHHhcC
Confidence            889    9999999999999999998765

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>KOG2186|consensus

Probab=87.05  E-value=0.37  Score=40.49  Aligned_cols=46  Identities=22%  Similarity=0.632  Sum_probs=24.6

Q ss_pred             cccccchhhhcCHHHHHHHHhhhcCCcccccccccccCChHHHHHHHH
Q psy6525         295 YQCAMCKKQYASKKMLEKHIRRHEGQDYKCYICGNRYATQKYLEEHIR  342 (360)
Q Consensus       295 ~~C~~C~~~f~~~~~L~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~  342 (360)
                      |.|..||....-. .+.+|+.+.++.-|.|-.|++.|.+ ..+..|..
T Consensus         4 FtCnvCgEsvKKp-~vekH~srCrn~~fSCIDC~k~F~~-~sYknH~k   49 (276)
T KOG2186|consen    4 FTCNVCGESVKKP-QVEKHMSRCRNAYFSCIDCGKTFER-VSYKNHTK   49 (276)
T ss_pred             Eehhhhhhhcccc-chHHHHHhccCCeeEEeeccccccc-chhhhhhh
Confidence            4555555554332 3444655555555666666666655 44555543

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=84.37  E-value=0.69  Score=28.89  Aligned_cols=27  Identities=15%  Similarity=0.463  Sum_probs=16.0

Q ss_pred             cCCCccccccchhhhcCHHHHHHHHhh
Q psy6525         290 EEPNKYQCAMCKKQYASKKMLEKHIRR  316 (360)
Q Consensus       290 ~~~~~~~C~~C~~~f~~~~~L~~H~~~  316 (360)
                      .|+.-+.|+.|+..|.......+|+..
T Consensus        13 DGE~~lrCPRC~~~FR~~K~Y~RHVNK   39 (65)
T COG4049          13 DGEEFLRCPRCGMVFRRRKDYIRHVNK   39 (65)
T ss_pred             CCceeeeCCchhHHHHHhHHHHHHhhH
Confidence            344555666666666666666666554

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=84.03  E-value=0.45  Score=29.70  Aligned_cols=27  Identities=22%  Similarity=0.439  Sum_probs=23.8

Q ss_pred             cccccccccccCChHHHHHHHHHhCCC
Q psy6525         321 DYKCYICGNRYATQKYLEEHIRLHQGH  347 (360)
Q Consensus       321 ~~~C~~C~~~f~~~~~l~~H~~~h~g~  347 (360)
                      -++|+-||..|....++.+|+..-||-
T Consensus        17 ~lrCPRC~~~FR~~K~Y~RHVNKaH~~   43 (65)
T COG4049          17 FLRCPRCGMVFRRRKDYIRHVNKAHGW   43 (65)
T ss_pred             eeeCCchhHHHHHhHHHHHHhhHHhhh
Confidence            579999999999999999999876653

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=82.34  E-value=0.8  Score=33.74  Aligned_cols=11  Identities=18%  Similarity=0.325  Sum_probs=5.4

Q ss_pred             ccccccccccc
Q psy6525         130 FQCNVCFLMLN  140 (360)
Q Consensus       130 ~~C~~C~~~f~  140 (360)
                      ..|+.||..|.
T Consensus        10 R~Cp~CG~kFY   20 (108)
T PF09538_consen   10 RTCPSCGAKFY   20 (108)
T ss_pred             ccCCCCcchhc
Confidence            44555555544

The function of members of this family is unknown.

>KOG2186|consensus

Probab=82.12  E-value=0.75  Score=38.76  Aligned_cols=46  Identities=24%  Similarity=0.722  Sum_probs=27.3

Q ss_pred             eecccccccccChhHHHHHHHhcCCCCCcCccccccccCHHHHHHHHh
Q psy6525         185 YKCKECGKCYTQNTNLKQHMLSHKGIFFICFHCNKNFTHRALLVRHMQ  232 (360)
Q Consensus       185 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~  232 (360)
                      |.|..||..... ..+.+|+...++..|.|--|++.|.. ..+..|..
T Consensus         4 FtCnvCgEsvKK-p~vekH~srCrn~~fSCIDC~k~F~~-~sYknH~k   49 (276)
T KOG2186|consen    4 FTCNVCGESVKK-PQVEKHMSRCRNAYFSCIDCGKTFER-VSYKNHTK   49 (276)
T ss_pred             Eehhhhhhhccc-cchHHHHHhccCCeeEEeeccccccc-chhhhhhh
Confidence            566666666543 33455666666666666666666665 45555554

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	360
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		7e-20
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		1e-15
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		3e-09
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		5e-09
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		2e-07
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		3e-06
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		4e-06
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		3e-06
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		3e-06
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		4e-06
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		5e-06
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		1e-05
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		4e-04
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		4e-05
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		8e-05
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		8e-05
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		9e-05
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		2e-04
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		1e-04
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		2e-04
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		2e-04
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		2e-04
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		2e-04
2lt7_A	133	Solution Nmr Structure Of Kaiso Zinc Finger Dna Bin		2e-04
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		6e-04

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 94.7 bits (234), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 88/175 (50%), Gaps = 4/175 (2%)
Query: 149 LLKHNWVRFKCDLCSRTFNSQSYLQQHKKHDHEGVK-YKCKECGKCYTQNTNLKQHMLSH 207
            L+     + C  C ++F+   +L +H++  H G K YKC ECGK ++   +L +H  +H
Sbjct: 14  ALEPGEKPYACPECGKSFSRSDHLAEHQR-THTGEKPYKCPECGKSFSDKKDLTRHQRTH 72
Query: 208 KG-IFFICFHCNKNFTHRALLVRHMQKHSSER-FKCDLCGKVTPYYQHYLRHMRIHQGLE 265
            G   + C  C K+F+ RA L  H + H+ E+ + C  CGK      H   H R H G +
Sbjct: 73  TGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEK 132
Query: 266 VHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEGQ 320
            ++C  C K F+ + +L  H + H     Y+C  C K ++ +  L  H R H G+
Sbjct: 133 PYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGK 187

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 75/161 (46%), Gaps = 3/161 (1%)
Query: 194 YTQNTNLKQHMLSHKGIFFICFHCNKNFTHRALLVRHMQKHSSER-FKCDLCGKVTPYYQ 252
           +  ++++ Q  L      + C  C K+F+    L  H + H+ E+ +KC  CGK     +
Sbjct: 4   FGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKK 63
Query: 253 HYLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEK 312
              RH R H G + ++C  C K F+ + +L+ H + H     Y C  C K ++    L  
Sbjct: 64  DLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRA 123
Query: 313 HIRRHEGQ-DYKCYICGNRYATQKYLEEHIRLHQGH-TYMC 351
           H R H G+  YKC  CG  ++ +  L  H R H G   Y C
Sbjct: 124 HQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKC 164

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 217 CNKNFTHRALLVRHMQKHSSER-FKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLCAKL 275
           C K+FTH++   RHM  H   R + C +CGK      H + HM+IH G++ +ECN+CAK 
Sbjct: 15  CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKR 74
Query: 276 FACKRSLQDHM 286
           F  + S   H+
Sbjct: 75  FMWRDSFHRHV 85

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 58.5 bits (140), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 53/84 (63%), Gaps = 3/84 (3%)
Query: 157 FKCDLCSRTFNSQSYLQQHKKHDHEGVK-YKCKECGKCYTQNTNLKQHMLSHKG-IFFIC 214
           +KC  C ++F+  S LQ+H++  H G K YKC ECGK ++Q+++L++H  +H G   + C
Sbjct: 5   YKCPECGKSFSQSSNLQKHQR-THTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKPYKC 63
Query: 215 FHCNKNFTHRALLVRHMQKHSSER 238
             C K+F+    L RH + H +++
Sbjct: 64  PECGKSFSRSDHLSRHQRTHQNKK 87

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 265 EVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEGQ-DYK 323
           + ++C  C K F+   +LQ H + H     Y+C  C K ++    L+KH R H G+  YK
Sbjct: 3   KPYKCPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKPYK 62
Query: 324 CYICGNRYATQKYLEEHIRLHQ 345
           C  CG  ++   +L  H R HQ
Sbjct: 63  CPECGKSFSRSDHLSRHQRTHQ 84

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 185 YKCKECGKCYTQNTNLKQHMLSHKGI-FFICFHCNKNFTHRALLVRHMQKHSSER-FKCD 242
           +KC+ CGKC+++   LK HM  H G+  + C  C+      + L +H++ HS ER FKC 
Sbjct: 9   HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQ 68
Query: 243 LCGKVTPYYQHYLRHMRIHQG 263
           +C   +        H+R H G
Sbjct: 69  ICPYASRNSSQLTVHLRSHTG 89

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 267 HECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEGQ-DYKCY 325
           H+C +C K F+ K  L+ HM+ H     Y+C  C    A    L KH+R H  +  +KC 
Sbjct: 9   HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQ 68
Query: 326 ICGNRYATQKYLEEHIRLHQG 346
           IC         L  H+R H G
Sbjct: 69  ICPYASRNSSQLTVHLRSHTG 89

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 272 CAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEGQ-DYKCYICGNR 330
           C + F+ K +L  H++ H     +QC +C + ++    L +HIR H G+  + C ICG +
Sbjct: 12  CDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQHTGLNQHIRTHTGEKPFACDICGRK 71
Query: 331 YATQKYLEEHIRLH 344
           +AT    + H ++H
Sbjct: 72  FATLHTRDRHTKIH 85

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 268 ECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEGQ-DYKCYI 326
           +C +C K F    +L  H+  H +   Y C  C K++  K  ++KH   H G+  +KC +
Sbjct: 3   DCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQV 62
Query: 327 CGNRYATQKYLEEHIRLHQG 346
           CG  ++    L  H R H G
Sbjct: 63  CGKAFSQSSNLITHSRKHTG 82

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 272 CAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEGQ-DYKCYICGNR 330
           C + F+ K +L  H++ H     +QC +C + ++ +  L  HIR H G+  + C ICG +
Sbjct: 12  CDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQQASLNAHIRTHTGEKPFACDICGRK 71
Query: 331 YATQKYLEEHIRLH 344
           +AT      H ++H
Sbjct: 72  FATLHTRTRHTKIH 85

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 5/113 (4%)
Query: 214 CFHCNKNFTHRALLVRHMQKHSSER-FKCDLCGKVTPYYQHYLRHMR---IHQGLEVHEC 269
           C  C+K F  +  L  H +KH+ E+ F+C  CGK     ++ L H     +++  +V  C
Sbjct: 10  CPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTC 69
Query: 270 NLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKH-IRRHEGQD 321
           ++C + F  +  L+ HM  H     Y+C+ C +Q+  KK L+ H I+ H G  
Sbjct: 70  SVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS 122

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 53/114 (46%), Gaps = 5/114 (4%)
Query: 188 KECGKCYTQNTNLKQHMLSHKGIFFICFHCNKNFTHRALLVRHMQKHSSER-FKCDL--C 244
           K C K +  N+ +++H+ +H     +C  C K F   + L RH   H+ E+ F+C    C
Sbjct: 11  KGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGC 70
Query: 245 GKVTPYYQHYLRHMRIHQGLEVHECNL--CAKLFACKRSLQDHMQRHEEPNKYQ 296
           GK      +   H+RIH G   + C    C K FA   +L+ H+  H +    Q
Sbjct: 71  GKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ 124

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Query: 272 CAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEGQ-DYKCYI--CG 328
           C K+F    +++ H+  H  P  + CA C K +     L++H   H G+  ++C    CG
Sbjct: 13  CTKMFRDNSAMRKHLHTHG-PRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCG 71
Query: 329 NRYATQKYLEEHIRLHQG-HTYM-----CNAKFS 356
            R++    L  H+R+H G   Y+     CN KF+
Sbjct: 72  KRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFA 105

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 272 CAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEGQ-DYKCYICGNR 330
           C + F+   SL  H++ H     +QC +C + ++    L  HIR H G+  + C ICG +
Sbjct: 12  CDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71
Query: 331 YATQKYLEEHIRLH 344
           +A     + H ++H
Sbjct: 72  FARSDERKRHTKIH 85

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 272 CAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEGQ-DYKCYICGNR 330
           C + F+   +L  H++ H     +QC +C + ++    L  HIR H G+  + C ICG +
Sbjct: 12  CDRRFSDSSNLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71
Query: 331 YATQKYLEEHIRLH 344
           +A     + H ++H
Sbjct: 72  FARSDERKRHTKIH 85

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Query: 268 ECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEGQDYKCYI- 326
            C +C K+F     L  H   H     Y C +C  ++  K  +  H+R H+G   K YI 
Sbjct: 9   ACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYIC 68
Query: 327 --CGNRYATQKYLEEHIR-LHQG 346
             CG  ++   +L  HI+ +H G
Sbjct: 69  QSCGKGFSRPDHLNGHIKQVHSG 91

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 156 RFKCDLCSRTFNSQSYLQQHKKHDHEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
           R+KCD C ++F+  S L +H++  H G K YKC ECGK + Q ++L  H   H G
Sbjct: 18  RYKCDECGKSFSHSSDLSKHRR-THTGEKPYKCDECGKAFIQRSHLIGHHRVHTG 71

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 212 FICFHCNKNFTHRALLVRHMQKHSSER-FKCDLCGKVTPYYQHYLRHMRIHQG 263
           + C  C K+F+H + L +H + H+ E+ +KCD CGK      H + H R+H G
Sbjct: 19  YKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTG 71

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 272 CAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEGQ-DYKCYICGNR 330
           C + F+    L  H++ H     +QC +C + ++    L  HIR H G+  + C ICG +
Sbjct: 12  CDRRFSRSADLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71
Query: 331 YATQKYLEEHIRLH 344
           +A     + H ++H
Sbjct: 72  FARSDERKRHTKIH 85

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 272 CAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEGQ-DYKCYICGNR 330
           C + F+    L  H++ H     +QC +C + ++    L  HIR H G+  + C ICG +
Sbjct: 12  CDRRFSRSAELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71
Query: 331 YATQKYLEEHIRLH 344
           +A     + H ++H
Sbjct: 72  FARSDERKRHTKIH 85

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 272 CAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEGQ-DYKCYICGNR 330
           C + F+    L  H++ H     +QC +C + ++    L  HIR H G+  + C ICG +
Sbjct: 12  CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71
Query: 331 YATQKYLEEHIRLH 344
           +A     + H ++H
Sbjct: 72  FARSDERKRHTKIH 85

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 272 CAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEGQ-DYKCYICGNR 330
           C + F+    L  H++ H     +QC +C + ++    L  HIR H G+  + C ICG +
Sbjct: 11  CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 70
Query: 331 YATQKYLEEHIRLH 344
           +A     + H ++H
Sbjct: 71  FARSDERKRHTKIH 84

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 272 CAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEGQ-DYKCYICGNR 330
           C + F+    L  H++ H     +QC +C + ++    L  HIR H G+  + C ICG +
Sbjct: 12  CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71
Query: 331 YATQKYLEEHIRLH 344
           +A     + H ++H
Sbjct: 72  FARSDERKRHTKIH 85

>pdb|2LT7|A Chain A, Solution Nmr Structure Of Kaiso Zinc Finger Dna Binding Domain In Complex With Kaiso Binding Site Dna Length = 133

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 260 IHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG 319
           I  G   + C +C + + C  SL+ H   H    KY C  C+K +   +   KH   H G
Sbjct: 16  IVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTG 75
Query: 320 Q-DYKCYICGNRYATQKYLEEHIR 342
           +  Y+C  CG  +   +++  HI+
Sbjct: 76  ERRYQCLACGKSFINYQFMSSHIK 99

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 282 LQDHMQRHEEPNKYQCAM--CKKQYASKKMLEKHIRRHEG-QDYKCYICGNRYATQKYLE 338
           LQ H ++H     YQC    C+++++    L++H RRH G + ++C  C  +++   +L+
Sbjct: 24  LQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLK 83
Query: 339 EHIRLHQG 346
            H R H G
Sbjct: 84  THTRTHTG 91

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	360
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-27
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	5e-27
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-11
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-21
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-19
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	4e-07
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	1e-18
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	4e-05
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-17
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	7e-11
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	8e-11
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	1e-16
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-14
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	4e-14
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-16
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-13
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	3e-06
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-16
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-16
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	3e-06
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	6e-15
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	6e-14
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	2e-09
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	4e-06
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	7e-06
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	6e-15
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-14
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	8e-06
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	8e-14
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-13
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	1e-10
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-08
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	1e-06
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	2e-13
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	3e-08
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	9e-08
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	4e-13
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-09
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	3e-06
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	9e-06
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-05
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	4e-12
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-10
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	6e-09
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	5e-12
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	3e-10
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	7e-10
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-11
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-07
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	3e-06
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	4e-11
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	9e-09
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	8e-08
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-06
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	3e-06
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	7e-06
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	5e-11
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	1e-06
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	6e-05
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	9e-11
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	3e-10
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	2e-07
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	1e-06
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	2e-10
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	6e-10
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	6e-09
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	3e-04
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	2e-10
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	2e-09
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	6e-09
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	2e-08
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	2e-10
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	2e-09
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	9e-08
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	3e-05
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	3e-10
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	6e-07
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	3e-05
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	7e-10
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	3e-08
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	5e-08
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	7e-06
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	7e-10
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	9e-08
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	8e-07
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	1e-04
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	7e-10
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	4e-08
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	1e-06
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	1e-04
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	1e-09
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	2e-08
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	5e-07
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	4e-05
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	4e-09
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	4e-08
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	3e-06
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	4e-05
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	5e-09
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	6e-08
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	1e-07
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	1e-06
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	5e-08
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	1e-06
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	7e-06
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	1e-07
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	1e-05
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	1e-05
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	8e-05
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	9e-04
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	2e-07
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	3e-05
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	9e-07
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	2e-04
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	9e-04
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-06
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	7e-06
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	8e-06
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	1e-05
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	5e-05
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-05
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-05
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	2e-05
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	2e-05
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	7e-05
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	1e-04
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	1e-04
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-05
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-05
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-05
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-05
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-05
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-05
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-05
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-05
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-05
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-05
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-05
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-05
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	4e-05
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	1e-04
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	5e-04
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-05
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-05
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-05
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	5e-05
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-05
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-05
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-05
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-05
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	6e-05
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-05
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-05
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-05
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	7e-05
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	8e-05
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	8e-05
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	8e-05
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-05
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	8e-05
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	9e-05
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	9e-05
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-04
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-04
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-04
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-04
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-04
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-04
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-04
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	1e-04
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-04
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-04
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-04
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-04
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-04
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	1e-04
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-04
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-04
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-04
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-04
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-04
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	2e-04
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-04
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-04
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-04
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-04
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-04
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-04
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-04
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-04
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-04
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-04
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-04
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	3e-04
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-04
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	3e-04
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-04
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-04
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-04
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-04
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	4e-04
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-04
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-04
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-04
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-04
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	5e-04
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-04
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-04
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	5e-04
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-04
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	5e-04
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	7e-04

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  106 bits (267), Expect = 1e-27
 Identities = 59/188 (31%), Positives = 90/188 (47%), Gaps = 9/188 (4%)

Query: 165 TFNSQSYLQQHKKHDHEGVK-YKCKECGKCYTQNTNLKQHMLSHKG-IFFICFHCNKNFT 222
           +    S           G K Y C ECGK ++++ +L +H  +H G   + C  C K+F+
Sbjct: 2   SEFGSSSSVAQAAL-EPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFS 60

Query: 223 HRALLVRHMQKHSSER-FKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRS 281
            +  L RH + H+ E+ +KC  CGK      +   H R H G + + C  C K F+    
Sbjct: 61  DKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAH 120

Query: 282 LQDHMQRH--EEPNKYQCAMCKKQYASKKMLEKHIRRHEGQD-YKCYICGNRYATQKYLE 338
           L+ H + H  E+P  Y+C  C K ++ +  L  H R H G+  YKC  CG  ++ +  L 
Sbjct: 121 LRAHQRTHTGEKP--YKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALN 178

Query: 339 EHIRLHQG 346
            H R H G
Sbjct: 179 VHQRTHTG 186

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  104 bits (263), Expect = 5e-27
 Identities = 56/168 (33%), Positives = 88/168 (52%), Gaps = 8/168 (4%)

Query: 157 FKCDLCSRTFNSQSYLQQHKKHDHEGVK-YKCKECGKCYTQNTNLKQHMLSHKG-IFFIC 214
           + C  C ++F+   +L +H++  H G K YKC ECGK ++   +L +H  +H G   + C
Sbjct: 22  YACPECGKSFSRSDHLAEHQR-THTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKC 80

Query: 215 FHCNKNFTHRALLVRHMQKHSSER-FKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLCA 273
             C K+F+ RA L  H + H+ E+ + C  CGK      H   H R H G + ++C  C 
Sbjct: 81  PECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECG 140

Query: 274 KLFACKRSLQDHMQRH--EEPNKYQCAMCKKQYASKKMLEKHIRRHEG 319
           K F+ + +L  H + H  E+P  Y+C  C K ++ +  L  H R H G
Sbjct: 141 KSFSREDNLHTHQRTHTGEKP--YKCPECGKSFSRRDALNVHQRTHTG 186

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 62.1 bits (152), Expect = 1e-11
 Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 3/84 (3%)

Query: 157 FKCDLCSRTFNSQSYLQQHKKHDHEGVK-YKCKECGKCYTQNTNLKQHMLSHKGIF-FIC 214
           + C  C ++F+  ++L+ H++  H G K YKC ECGK +++  NL  H  +H G   + C
Sbjct: 106 YACPECGKSFSQLAHLRAHQR-THTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKC 164

Query: 215 FHCNKNFTHRALLVRHMQKHSSER 238
             C K+F+ R  L  H + H+ ++
Sbjct: 165 PECGKSFSRRDALNVHQRTHTGKK 188

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 90.0 bits (224), Expect = 1e-21
 Identities = 45/176 (25%), Positives = 69/176 (39%), Gaps = 16/176 (9%)

Query: 156 RFKCDL--CSRTFNSQSYLQQHKKHDHEGVK-YKCKE--CGKCYTQNTNLKQHMLSHKG- 209
           R+ C    C   +N    LQ H    H G K + CKE  C K +T   +L +H L+H G 
Sbjct: 12  RYICSFADCGAAYNKNWKLQAHLC-KHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGE 70

Query: 210 IFFIC--FHCNKNFTHRALLVRHMQKHSSER---FKCDL--CGKVTPYYQHYLRHMRIHQ 262
             F C    C+  FT +A + +H  +  + +   + C    CGK    +     H   H 
Sbjct: 71  KNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHT 130

Query: 263 GLEVHECN--LCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRR 316
               +EC    C K F+    L+ H + H      +   C     +  +  KH+  
Sbjct: 131 QQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAE 186

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 84.2 bits (209), Expect = 1e-19
 Identities = 51/187 (27%), Positives = 73/187 (39%), Gaps = 25/187 (13%)

Query: 180 HEGVK-YKCK--ECGKCYTQNTNLKQHMLSHKG-IFFIC--FHCNKNFTHRALLVRHMQK 233
               K Y C   +CG  Y +N  L+ H+  H G   F C    C K FT    L RH   
Sbjct: 7   PVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLT 66

Query: 234 HSSER-FKCD--LCGKVTPYYQHYLRHMRIHQG--LEVHECNL--CAKLFACKRSLQDHM 286
           H+ E+ F CD   C        +  +H        + V+ C+   C K F     L+ H 
Sbjct: 67  HTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQ 126

Query: 287 QRH--EEPNKYQC--AMCKKQYASKKMLEKHIRRHEGQD-YKCYIC---GNRYATQKYLE 338
             H  + P  Y+C    C K+++    L++H + H G    K   C   G  +    YL+
Sbjct: 127 FSHTQQLP--YECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTL--YLK 182

Query: 339 EHIRLHQ 345
                HQ
Sbjct: 183 HVAECHQ 189

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 48.7 bits (117), Expect = 4e-07
 Identities = 23/110 (20%), Positives = 45/110 (40%), Gaps = 14/110 (12%)

Query: 257 HMRIHQGLEVHECNL--CAKLFACKRSLQDHMQRH--EEPNKYQC--AMCKKQYASKKML 310
              +    + + C+   C   +     LQ H+ +H  E+P  + C    C+K + S   L
Sbjct: 3   EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKP--FPCKEEGCEKGFTSLHHL 60

Query: 311 EKHIRRHEGQD-YKC--YICGNRYATQKYLEEHIRLHQG---HTYMCNAK 354
            +H   H G+  + C    C  R+ T+  +++H           Y+C+ +
Sbjct: 61  TRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFE 110

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 81.1 bits (201), Expect = 1e-18
 Identities = 47/176 (26%), Positives = 71/176 (40%), Gaps = 37/176 (21%)

Query: 157 FKCDLCSRTFNSQSYLQQH--KKHDHEGVK-YKCKECGKCYTQNTNLKQHMLSHKGIFFI 213
            + D CS+ F+SQ  L  H   +H H   K + C   G                      
Sbjct: 4   CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGG---------------------- 41

Query: 214 CFHCNKNFTHRALLVRHMQKHSSER-FKCDL--CGKVTPYYQHYLRHMRIHQGLEVHECN 270
           C    + F  + +LV HM++H+ E+  KC    C K     ++   H+R H G + + C 
Sbjct: 42  CSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCE 101

Query: 271 --LCAKLFACKRSLQDHMQR-H--EEPNKYQCAM--CKKQYASKKMLEKHIRRHEG 319
              C+K F+       H  R H  E+P  Y C +  C K+Y     L KH++   G
Sbjct: 102 HEGCSKAFSNASDRAKHQNRTHSNEKP--YVCKLPGCTKRYTDPSSLRKHVKTVHG 155

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 42.6 bits (101), Expect = 4e-05
 Identities = 21/92 (22%), Positives = 40/92 (43%), Gaps = 15/92 (16%)

Query: 268 ECNLCAKLFACKRSLQDHMQRH-----EEPNKYQC-----AMCKKQYASKKMLEKHIRRH 317
             + C++ F  +  L  H+         +   + C     +   + + ++ ML  H+RRH
Sbjct: 5   RWDGCSQEFDSQEQLVHHINSEHIHGERKE--FVCHWGGCSRELRPFKAQYMLVVHMRRH 62

Query: 318 EGQD-YKCYI--CGNRYATQKYLEEHIRLHQG 346
            G+  +KC    C   Y+  + L+ H+R H G
Sbjct: 63  TGEKPHKCTFEGCRKSYSRLENLKTHLRSHTG 94

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 76.4 bits (189), Expect = 2e-17
 Identities = 32/117 (27%), Positives = 52/117 (44%), Gaps = 13/117 (11%)

Query: 157 FKCDL--CSRTFNSQSYLQQHKK-HDHEGVK-YKCKECGKCYTQNTNLKQHMLSHKG-IF 211
             C    C++ F   S +++H   H   G + + C ECGK + +++ LK+H L H G   
Sbjct: 6   IACPHKGCTKMFRDNSAMRKHLHTH---GPRVHVCAECGKAFVESSKLKRHQLVHTGEKP 62

Query: 212 FICFH--CNKNFTHRALLVRHMQKHSSER-FKCDL--CGKVTPYYQHYLRHMRIHQG 263
           F C    C K F+    L  H++ H+ +R + C    C K      +   H+  H  
Sbjct: 63  FQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAK 119

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 58.3 bits (142), Expect = 7e-11
 Identities = 34/117 (29%), Positives = 47/117 (40%), Gaps = 12/117 (10%)

Query: 239 FKCDL--CGKVTPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRH--EEPNK 294
             C    C K+        +H+  H G  VH C  C K F     L+ H   H  E+P  
Sbjct: 6   IACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKP-- 62

Query: 295 YQCAM--CKKQYASKKMLEKHIRRHEGQD-YKCYI--CGNRYATQKYLEEHIRLHQG 346
           +QC    C K+++    L  H+R H G   Y C    C  ++A    L+ HI  H  
Sbjct: 63  FQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAK 119

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 57.9 bits (141), Expect = 8e-11
 Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 7/88 (7%)

Query: 157 FKCDLCSRTFNSQSYLQQHKKHDHEGVK-YKC--KECGKCYTQNTNLKQHMLSHKGIF-F 212
             C  C + F   S L++H+   H G K ++C  + CGK ++ + NL+ H+  H G   +
Sbjct: 35  HVCAECGKAFVESSKLKRHQL-VHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPY 93

Query: 213 ICFH--CNKNFTHRALLVRHMQKHSSER 238
           +C    CNK F     L  H+  H+  +
Sbjct: 94  VCPFDGCNKKFAQSTNLKSHILTHAKAK 121

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 75.4 bits (186), Expect = 1e-16
 Identities = 30/153 (19%), Positives = 52/153 (33%), Gaps = 19/153 (12%)

Query: 162 CSRTFNSQSYLQQHKKHDHEGVKYKCKECGKCYTQNTNLKQHMLSHKG----------IF 211
              +          K  D   +    K C + ++    L  H+                +
Sbjct: 3   SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62

Query: 212 FICFHCNKNFTHRALLVRHMQKHSSER-FKCDL--CGKVTPYYQHYLRHMRIHQGLEVHE 268
             C    K+F  +  LV H++ H+ E+ F C    CGK+    ++   H R H G +  +
Sbjct: 63  EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFK 122

Query: 269 CNL--CAKLFACKRSLQDHMQRH--EEPNKYQC 297
           C    C + FA     + HM  H  ++      
Sbjct: 123 CEFEGCDRRFANSSDRKKHMHVHTSDKS--GPS 153

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 68.9 bits (169), Expect = 2e-14
 Identities = 32/143 (22%), Positives = 50/143 (34%), Gaps = 20/143 (13%)

Query: 148 HLLKHNWV-----RFKCDLCSRTFNSQSYLQQHK---------KHDHEGVKYKCKECGKC 193
             L   W+           C RTF++   L  H          +++H     +C   GK 
Sbjct: 12  QELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKS 71

Query: 194 YTQNTNLKQHMLSHKG-IFFICFH--CNKNFTHRALLVRHMQKHSSER-FKCDL--CGKV 247
           +     L  H+  H G   F C    C K F     L  H + H+ E+ FKC+   C + 
Sbjct: 72  FKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRR 131

Query: 248 TPYYQHYLRHMRIHQGLEVHECN 270
                   +HM +H   +    +
Sbjct: 132 FANSSDRKKHMHVHTSDKSGPSS 154

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 68.5 bits (168), Expect = 4e-14
 Identities = 32/172 (18%), Positives = 57/172 (33%), Gaps = 25/172 (14%)

Query: 189 ECGKCYTQNTNLKQHMLSHKGIF-FICFHCNKNFTHRALLVRHMQKHSSERFKCDLCGKV 247
             G                +         C++ F+    LV H+                
Sbjct: 2   SSGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGG--------- 52

Query: 248 TPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRH--EEPNKYQCAMCKKQYA 305
            P   +++ +          EC    K F  K  L +H++ H  E+P       C K +A
Sbjct: 53  -PEQNNHVCY--------WEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFA 103

Query: 306 SKKMLEKHIRRHEGQD-YKCYI--CGNRYATQKYLEEHIRLHQGH-TYMCNA 353
             + L+ H R H G+  +KC    C  R+A     ++H+ +H    +   + 
Sbjct: 104 RSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSSG 155

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 74.5 bits (184), Expect = 1e-16
 Identities = 33/141 (23%), Positives = 54/141 (38%), Gaps = 30/141 (21%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKGIF-FICFHCNKNFTHRALLVRHMQKHSSE 237
             G    +C  C K +     LK H   H G   F C  C K +  +  L+ H       
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHE------ 55

Query: 238 RFKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRH--EEPNKY 295
                                 +++  +V  C++C + F  +  L+ HM  H  E P  Y
Sbjct: 56  ------------------ARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMP--Y 95

Query: 296 QCAMCKKQYASKKMLEKHIRR 316
           +C+ C +Q+  KK L+ H+ +
Sbjct: 96  KCSSCSQQFMQKKDLQSHMIK 116

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 66.0 bits (162), Expect = 1e-13
 Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 5/87 (5%)

Query: 157 FKCDLCSRTFNSQSYLQQHKKHD--HEGVK-YKCKECGKCYTQNTNLKQHMLSHKGIF-F 212
           F+C  C + +  +  L +H+  +  +   + + C  C + + +   L+ HM+SH G   +
Sbjct: 36  FECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPY 95

Query: 213 ICFHCNKNFTHRALLVRHMQK-HSSER 238
            C  C++ F  +  L  HM K HS   
Sbjct: 96  KCSSCSQQFMQKKDLQSHMIKLHSGPS 122

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 45.2 bits (108), Expect = 3e-06
 Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 8/85 (9%)

Query: 268 ECNLCAKLFACKRSLQDHMQRH--EEPNKYQCAMCKKQYASKKMLEKHIRR---HEGQD- 321
           EC  C K F  K  L+ H ++H  E+P  ++C  C K Y  K+ L +H  R   +  +  
Sbjct: 9   ECPTCHKKFLSKYYLKVHNRKHTGEKP--FECPKCGKCYFRKENLLEHEARNCMNRSEQV 66

Query: 322 YKCYICGNRYATQKYLEEHIRLHQG 346
           + C +C   +  +  L  H+  H G
Sbjct: 67  FTCSVCQETFRRRMELRLHMVSHTG 91

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 74.1 bits (183), Expect = 2e-16
 Identities = 31/113 (27%), Positives = 46/113 (40%), Gaps = 8/113 (7%)

Query: 185 YKCKE--CGKCYTQNTNLKQHMLSHKGIF-FIC--FHCNKNFTHRALLVRHMQKHSSER- 238
           + C    C K Y + ++L+ H   H G   + C    C + F+    L RH ++H+  + 
Sbjct: 7   FMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKP 66

Query: 239 FKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNL--CAKLFACKRSLQDHMQRH 289
           F+C  C +      H   H R H G +   C    C K FA    L  H   H
Sbjct: 67  FQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 74.1 bits (183), Expect = 2e-16
 Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 10/114 (8%)

Query: 157 FKCD--LCSRTFNSQSYLQQHKKHDHEGVK-YKC--KECGKCYTQNTNLKQHMLSHKGIF 211
           F C    C++ +   S+LQ H +  H G K Y+C  K+C + ++++  LK+H   H G+ 
Sbjct: 7   FMCAYPGCNKRYFKLSHLQMHSR-KHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVK 65

Query: 212 -FICFHCNKNFTHRALLVRHMQKHSSER-FKCDL--CGKVTPYYQHYLRHMRIH 261
            F C  C + F+    L  H + H+ E+ F C    C K        +RH  +H
Sbjct: 66  PFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 44.8 bits (107), Expect = 3e-06
 Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 9/87 (10%)

Query: 267 HECN--LCAKLFACKRSLQDHMQRH--EEPNKYQCAM--CKKQYASKKMLEKHIRRHEGQ 320
             C    C K +     LQ H ++H  E+P  YQC    C+++++    L++H RRH G 
Sbjct: 7   FMCAYPGCNKRYFKLSHLQMHSRKHTGEKP--YQCDFKDCERRFSRSDQLKRHQRRHTGV 64

Query: 321 D-YKCYICGNRYATQKYLEEHIRLHQG 346
             ++C  C  +++   +L+ H R H G
Sbjct: 65  KPFQCKTCQRKFSRSDHLKTHTRTHTG 91

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 69.4 bits (171), Expect = 6e-15
 Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 6/106 (5%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKGIF-FICFHCNKNFTHRALLVRHMQKHSSE 237
             G K Y C +CGK +T  +   +HM  H G+  + C  C K F  +  LV HM+ H+  
Sbjct: 5   SSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGI 63

Query: 238 R-FKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSL 282
           + ++C++C K   +      H  +    + +E     +        
Sbjct: 64  KPYECNICAKR--FMWRDSFHRHVTSCTKSYEAAKAEQNTTEASGP 107

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 66.3 bits (163), Expect = 6e-14
 Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 7/93 (7%)

Query: 157 FKCDLCSRTFNSQSYLQQHKKHDHEGVK-YKCKECGKCYTQNTNLKQHMLSHKGIF-FIC 214
           + C  C ++F  +S   +H    H G++ Y C  CGK +    +L  HM  H GI  + C
Sbjct: 11  YPCQ-CGKSFTHKSQRDRHMSM-HLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYEC 68

Query: 215 FHCNKNFTHRALLVRHMQKHSSER-FKCDLCGK 246
             C K F  R    RH+   S  + ++     +
Sbjct: 69  NICAKRFMWRDSFHRHV--TSCTKSYEAAKAEQ 99

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 53.6 bits (130), Expect = 2e-09
 Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 9/99 (9%)

Query: 234 HSSER-FKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRH--E 290
            S ++ + C  CGK   +     RHM +H GL  + C +C K F  K  L  HM+ H   
Sbjct: 5   SSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGI 63

Query: 291 EPNKYQCAMCKKQYASKKMLEKHIRRHEGQD-YKCYICG 328
           +P  Y+C +C K++  +    +H+        Y+     
Sbjct: 64  KP--YECNICAKRFMWRDSFHRHV--TSCTKSYEAAKAE 98

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 44.0 bits (105), Expect = 4e-06
 Identities = 7/45 (15%), Positives = 20/45 (44%), Gaps = 4/45 (8%)

Query: 157 FKCDLCSRTFNSQSYLQQHKKHDHEGVK-YKCKECGKCYTQNTNL 200
           ++C++C++ F  +    +H        K Y+  +  +  T+ +  
Sbjct: 66  YECNICAKRFMWRDSFHRHV---TSCTKSYEAAKAEQNTTEASGP 107

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 43.6 bits (104), Expect = 7e-06
 Identities = 26/102 (25%), Positives = 39/102 (38%), Gaps = 15/102 (14%)

Query: 258 MRIHQGLEVHECNLCAKLFACKRSLQDHMQRH--EEPNKYQCAMCKKQYASKKMLEKHIR 315
                G +++ C  C K F  K     HM  H    P  Y C +C K++  K  L  H++
Sbjct: 2   SSGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRP--YGCGVCGKKFKMKHHLVGHMK 58

Query: 316 RHEGQD-YKCYICGNRYATQKYLEEHIRLHQGHT----YMCN 352
            H G   Y+C IC  R+  +     H+      +    Y   
Sbjct: 59  IHTGIKPYECNICAKRFMWRDSFHRHV-----TSCTKSYEAA 95

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 68.7 bits (169), Expect = 6e-15
 Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 6/87 (6%)

Query: 157 FKCDLCSRTFNSQSYLQQHKKHDHEGVK-YKCKECGKCYTQNTNLKQHMLSHKGIF---F 212
             C++C + F    +L +HK   H G K Y C  CG  + +   +  H+ SH G     +
Sbjct: 8   VACEICGKIFRDVYHLNRHKL-SHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPY 66

Query: 213 ICFHCNKNFTHRALLVRHMQK-HSSER 238
           IC  C K F+    L  H+++ HS   
Sbjct: 67  ICQSCGKGFSRPDHLNGHIKQVHSGPS 93

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 67.1 bits (165), Expect = 2e-14
 Identities = 25/111 (22%), Positives = 38/111 (34%), Gaps = 27/111 (24%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKGIF-FICFHCNKNFTHRALLVRHMQKHSSE 237
             G     C+ CGK +    +L +H LSH G   + C  C   F  +  +  H++ H   
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 61

Query: 238 RFKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQR 288
             K        PY                  C  C K F+    L  H+++
Sbjct: 62  VGK--------PY-----------------ICQSCGKGFSRPDHLNGHIKQ 87

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 42.9 bits (102), Expect = 8e-06
 Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 8/86 (9%)

Query: 267 HECNLCAKLFACKRSLQDHMQRH--EEPNKYQCAMCKKQYASKKMLEKHIRRHEGQDYK- 323
             C +C K+F     L  H   H  E+P  Y C +C  ++  K  +  H+R H+G   K 
Sbjct: 8   VACEICGKIFRDVYHLNRHKLSHSGEKP--YSCPVCGLRFKRKDRMSYHVRSHDGSVGKP 65

Query: 324 --CYICGNRYATQKYLEEHI-RLHQG 346
             C  CG  ++   +L  HI ++H G
Sbjct: 66  YICQSCGKGFSRPDHLNGHIKQVHSG 91

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 65.6 bits (161), Expect = 8e-14
 Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 5/86 (5%)

Query: 157 FKCDL--CSRTFNSQSYLQQHKKHDHEGVK-YKCKECGKCYTQNTNLKQHMLSHKGIF-F 212
           + C +  C R F+    L +H +  H G K ++C+ C + ++++ +L  H+ +H G   F
Sbjct: 5   YACPVESCDRRFSQSGSLTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPF 63

Query: 213 ICFHCNKNFTHRALLVRHMQKHSSER 238
            C  C + F       RH + H  ++
Sbjct: 64  ACDICGRKFARSDERKRHTKIHLRQK 89

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 64.4 bits (158), Expect = 2e-13
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 4/83 (4%)

Query: 185 YKC--KECGKCYTQNTNLKQHMLSHKG-IFFICFHCNKNFTHRALLVRHMQKHSSER-FK 240
           Y C  + C + ++Q+ +L +H+  H G   F C  C +NF+    L  H++ H+ E+ F 
Sbjct: 5   YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 64

Query: 241 CDLCGKVTPYYQHYLRHMRIHQG 263
           CD+CG+         RH +IH  
Sbjct: 65  CDICGRKFARSDERKRHTKIHLR 87

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 56.7 bits (138), Expect = 1e-10
 Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 1/75 (1%)

Query: 216 HCNKNFTHRALLVRHMQKHSSER-FKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLCAK 274
            C++ F+    L RH++ H+ ++ F+C +C +      H   H+R H G +   C++C +
Sbjct: 11  SCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGR 70

Query: 275 LFACKRSLQDHMQRH 289
            FA     + H + H
Sbjct: 71  KFARSDERKRHTKIH 85

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 50.2 bits (121), Expect = 2e-08
 Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 6/86 (6%)

Query: 239 FKCDL--CGKVTPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRH--EEPNK 294
           + C +  C +         RH+RIH G +  +C +C + F+    L  H++ H  E+P  
Sbjct: 5   YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP-- 62

Query: 295 YQCAMCKKQYASKKMLEKHIRRHEGQ 320
           + C +C +++A     ++H + H  Q
Sbjct: 63  FACDICGRKFARSDERKRHTKIHLRQ 88

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 45.1 bits (108), Expect = 1e-06
 Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 5/78 (6%)

Query: 272 CAKLFACKRSLQDHMQRH--EEPNKYQCAMCKKQYASKKMLEKHIRRHEGQD-YKCYICG 328
           C + F+   SL  H++ H  ++P  +QC +C + ++    L  HIR H G+  + C ICG
Sbjct: 12  CDRRFSQSGSLTRHIRIHTGQKP--FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICG 69

Query: 329 NRYATQKYLEEHIRLHQG 346
            ++A     + H ++H  
Sbjct: 70  RKFARSDERKRHTKIHLR 87

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 64.4 bits (158), Expect = 2e-13
 Identities = 16/77 (20%), Positives = 32/77 (41%), Gaps = 2/77 (2%)

Query: 157 FKCDLCSRTFNSQSYLQQHKKHDHEGVK-YKCKECGKCYTQNTNLKQHMLSHKGIFFICF 215
           F+C +C R F+   +L  H +  H G K + C  CG+ + ++   K+H      +  +  
Sbjct: 4   FQCRICMRNFSRSDHLTTHIR-THTGEKPFACDICGRKFARSDERKRHRDIQHILPILED 62

Query: 216 HCNKNFTHRALLVRHMQ 232
              +  +    L   + 
Sbjct: 63  KVEELLSKNYHLENEVA 79

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 49.8 bits (120), Expect = 3e-08
 Identities = 15/85 (17%), Positives = 31/85 (36%), Gaps = 6/85 (7%)

Query: 239 FKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRH-EEPNKYQC 297
           F+C +C +      H   H+R H G +   C++C + FA     + H       P     
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILP--ILE 61

Query: 298 AMCKKQYASK---KMLEKHIRRHEG 319
              ++  +     +     +++  G
Sbjct: 62  DKVEELLSKNYHLENEVARLKKLVG 86

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 48.3 bits (116), Expect = 9e-08
 Identities = 14/84 (16%), Positives = 32/84 (38%), Gaps = 4/84 (4%)

Query: 267 HECNLCAKLFACKRSLQDHMQRH--EEPNKYQCAMCKKQYASKKMLEKHIRRHEGQDYKC 324
            +C +C + F+    L  H++ H  E+P  + C +C +++A     ++H           
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTHTGEKP--FACDICGRKFARSDERKRHRDIQHILPILE 61

Query: 325 YICGNRYATQKYLEEHIRLHQGHT 348
                  +   +LE  +   +   
Sbjct: 62  DKVEELLSKNYHLENEVARLKKLV 85

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 62.6 bits (153), Expect = 4e-13
 Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 2/56 (3%)

Query: 157 FKCDLCSRTFNSQSYLQQHKK-HDHEGVK-YKCKECGKCYTQNTNLKQHMLSHKGI 210
           ++C +CSR +   S   +H        VK Y C  C K +T+  N+  H+     I
Sbjct: 11  YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 52.6 bits (127), Expect = 2e-09
 Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 4/59 (6%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLS--HKGIF-FICFHCNKNFTHRALLVRHMQKH 234
            EG   Y+CK C + YT  +N  +H ++   + +  + C  C K FT +  +  H++  
Sbjct: 5   KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 43.7 bits (104), Expect = 3e-06
 Identities = 11/56 (19%), Positives = 23/56 (41%), Gaps = 3/56 (5%)

Query: 212 FICFHCNKNFTHRALLVRHM--QKHSSER-FKCDLCGKVTPYYQHYLRHMRIHQGL 264
           + C  C++ +TH +   RH       + + + C  C K      +   H++I   +
Sbjct: 11  YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 42.2 bits (100), Expect = 9e-06
 Identities = 10/63 (15%), Positives = 23/63 (36%), Gaps = 2/63 (3%)

Query: 259 RIHQGLEVHECNLCAKLFACKRSLQDHM--QRHEEPNKYQCAMCKKQYASKKMLEKHIRR 316
              +G   + C +C++++    +   H           Y C  C K++  K  +  H++ 
Sbjct: 3   FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKI 62

Query: 317 HEG 319
              
Sbjct: 63  IHK 65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 41.0 bits (97), Expect = 2e-05
 Identities = 13/59 (22%), Positives = 28/59 (47%), Gaps = 3/59 (5%)

Query: 234 HSSER-FKCDLCGKVTPYYQHYLRHMRI--HQGLEVHECNLCAKLFACKRSLQDHMQRH 289
              E  ++C +C +V  +  ++ RH      + ++V+ C  C K F  K ++  H++  
Sbjct: 5   KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 60.9 bits (149), Expect = 4e-12
 Identities = 20/88 (22%), Positives = 33/88 (37%), Gaps = 5/88 (5%)

Query: 214 CFHCNKNFTHRALLVRHMQKHSSER-FKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLC 272
           C  C K F+ +  L  HM+ H+  + +KC  C           +H+RIH      +C +C
Sbjct: 11  CEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQIC 70

Query: 273 AKLFACKRSLQDHMQRH--EEPNKYQCA 298
                    L  H++ H  +        
Sbjct: 71  PYASRNSSQLTVHLRSHTGDSG--PSSG 96

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 56.3 bits (137), Expect = 2e-10
 Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 2/54 (3%)

Query: 157 FKCDLCSRTFNSQSYLQQHKKHDHEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
           +KC  C       S L +H +  H   + +KC+ C      ++ L  H+ SH G
Sbjct: 37  YKCKTCDYAAADSSSLNKHLR-IHSDERPFKCQICPYASRNSSQLTVHLRSHTG 89

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 52.0 bits (126), Expect = 6e-09
 Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 5/83 (6%)

Query: 267 HECNLCAKLFACKRSLQDHMQRH--EEPNKYQCAMCKKQYASKKMLEKHIRRHEGQD-YK 323
           H+C +C K F+ K  L+ HM+ H   +P  Y+C  C    A    L KH+R H  +  +K
Sbjct: 9   HKCEVCGKCFSRKDKLKTHMRCHTGVKP--YKCKTCDYAAADSSSLNKHLRIHSDERPFK 66

Query: 324 CYICGNRYATQKYLEEHIRLHQG 346
           C IC         L  H+R H G
Sbjct: 67  CQICPYASRNSSQLTVHLRSHTG 89

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 60.9 bits (149), Expect = 5e-12
 Identities = 29/132 (21%), Positives = 42/132 (31%), Gaps = 34/132 (25%)

Query: 170 SYLQQHKKHDHEGVK-YKCKECGKCYTQNTNLKQHMLSHKGIFFICFHCNKNFTHRALLV 228
           S     +    +  K + CK CG+                           +FT    L+
Sbjct: 3   SGSSGGRLP-SKTKKEFICKFCGR---------------------------HFTKSYNLL 34

Query: 229 RHMQKHSSER-FKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQ 287
            H + H+ ER + CD+C K      H   H  IH   +  +C  C K F   R+L  H  
Sbjct: 35  IHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKT 94

Query: 288 RH--EEPNKYQC 297
            H          
Sbjct: 95  LHMQTSS--PTA 104

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 55.9 bits (136), Expect = 3e-10
 Identities = 24/102 (23%), Positives = 39/102 (38%), Gaps = 6/102 (5%)

Query: 227 LVRHMQKHSSER-FKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSLQDH 285
                    +++ F C  CG+      + L H R H     + C++C K F  +  L+DH
Sbjct: 5   SSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDH 64

Query: 286 MQRH--EEPNKYQCAMCKKQYASKKMLEKHIRRHEGQD-YKC 324
              H  E+P  ++C  C K +   + L  H   H        
Sbjct: 65  RYIHSKEKP--FKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 54.7 bits (133), Expect = 7e-10
 Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%)

Query: 157 FKCDLCSRTFNSQSYLQQHKKHDHEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
           + CD+C + F  Q +L+ H+   H   K +KC+ECGK + Q+  L  H   H  
Sbjct: 46  YTCDICHKAFRRQDHLRDHRY-IHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQ 98

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 58.3 bits (142), Expect = 2e-11
 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 6/72 (8%)

Query: 172 LQQHKKHDHEGVK-YKCKECGKCYTQNTNLKQHMLSHKGIF---FICFHCNKNFTHRALL 227
                +  H G K Y+C  C   +TQ+  +K H+L         F C HC+     ++ L
Sbjct: 3   SGSSGR-THSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61

Query: 228 VRHMQK-HSSER 238
             H++K HS   
Sbjct: 62  GVHLRKQHSYSG 73

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 47.1 bits (113), Expect = 2e-07
 Identities = 15/70 (21%), Positives = 25/70 (35%), Gaps = 5/70 (7%)

Query: 199 NLKQHMLSHKGIF-FICFHCNKNFTHRALLVRHMQKHSSER---FKCDLCGKVTPYYQHY 254
           +      +H G   + C+ C+  FT    +  H+ +  +E    F C  C  V       
Sbjct: 2   SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61

Query: 255 LRHMR-IHQG 263
             H+R  H  
Sbjct: 62  GVHLRKQHSY 71

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 43.7 bits (104), Expect = 3e-06
 Identities = 17/74 (22%), Positives = 32/74 (43%), Gaps = 9/74 (12%)

Query: 281 SLQDHMQRH--EEPNKYQCAMCKKQYASKKMLEKHIRRHEGQD---YKCYICGNRYATQK 335
           S     + H  E+P  Y+C +C  ++     ++ HI +   ++   + C  C    A + 
Sbjct: 2   SSGSSGRTHSGEKP--YECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKS 59

Query: 336 YLEEHIRLHQGHTY 349
            L  H+R    H+Y
Sbjct: 60  DLGVHLRKQ--HSY 71

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 57.4 bits (139), Expect = 4e-11
 Identities = 14/57 (24%), Positives = 18/57 (31%), Gaps = 4/57 (7%)

Query: 185 YKCKECGKCYTQNTNLKQHMLSHKGIF----FICFHCNKNFTHRALLVRHMQKHSSE 237
            +C+ CG    Q  +L  H   H        F C  C K F     +  H  K    
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPA 64

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 50.9 bits (122), Expect = 9e-09
 Identities = 13/67 (19%), Positives = 19/67 (28%), Gaps = 4/67 (5%)

Query: 212 FICFHCNKNFTHRALLVRHMQKHSSER----FKCDLCGKVTPYYQHYLRHMRIHQGLEVH 267
             C  C      +A L  H +KH+       F C+ CGK          H        + 
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67

Query: 268 ECNLCAK 274
                + 
Sbjct: 68  APQESSG 74

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 48.2 bits (115), Expect = 8e-08
 Identities = 13/73 (17%), Positives = 18/73 (24%), Gaps = 4/73 (5%)

Query: 234 HSSER-FKCDLCGKVTPYYQHYLRHMRIH---QGLEVHECNLCAKLFACKRSLQDHMQRH 289
            S     +C++CG           H R H          C  C K F    S+  H  + 
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

Query: 290 EEPNKYQCAMCKK 302
                        
Sbjct: 62  HPALLLAPQESSG 74

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 45.1 bits (107), Expect = 1e-06
 Identities = 12/54 (22%), Positives = 21/54 (38%), Gaps = 3/54 (5%)

Query: 267 HECNLCAKLFACKRSLQDHMQRHEEPNK---YQCAMCKKQYASKKMLEKHIRRH 317
            +C +C      K SL  H ++H E      + C  C K++     +  H  + 
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 43.9 bits (104), Expect = 3e-06
 Identities = 13/54 (24%), Positives = 18/54 (33%), Gaps = 4/54 (7%)

Query: 295 YQCAMCKKQYASKKMLEKHIRRHEGQD----YKCYICGNRYATQKYLEEHIRLH 344
            QC +C      K  L  H R+H        + C  CG R+     +  H    
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 42.8 bits (101), Expect = 7e-06
 Identities = 13/67 (19%), Positives = 22/67 (32%), Gaps = 4/67 (5%)

Query: 130 FQCNVCFLMLNNRCYTRFHLLKHNWVR----FKCDLCSRTFNSQSYLQQHKKHDHEGVKY 185
            QC +C      +    +H  KH        F C+ C + F     +  H+   H  +  
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67

Query: 186 KCKECGK 192
             +E   
Sbjct: 68  APQESSG 74

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 57.2 bits (139), Expect = 5e-11
 Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 6/71 (8%)

Query: 157 FKCDL--CSRTFNSQSYLQQHKKHDHEGVK-YKCKE--CGKCYTQNTNLKQHMLSHKGIF 211
             CD   C R F+++ YL  HKK+ H   K + C E  CGK +    +LK+HM  H    
Sbjct: 8   MPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTR 67

Query: 212 -FICFHCNKNF 221
            +IC     + 
Sbjct: 68  DYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 44.8 bits (107), Expect = 1e-06
 Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 6/71 (8%)

Query: 212 FICFH--CNKNFTHRALLVRHM-QKHSSER-FKCD--LCGKVTPYYQHYLRHMRIHQGLE 265
             C    C + F++R  L  H   +H  ++ F C    CGK   + +H   HM++H    
Sbjct: 8   MPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTR 67

Query: 266 VHECNLCAKLF 276
            + C       
Sbjct: 68  DYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 39.8 bits (94), Expect = 6e-05
 Identities = 19/77 (24%), Positives = 28/77 (36%), Gaps = 10/77 (12%)

Query: 234 HSSER-FKCDL--CGKVTPYYQHYLRHMRI-HQGLEVHECN--LCAKLFACKRSLQDHMQ 287
            S      CD   CG++    Q+   H +  H   +   C    C K F  K+ L++HM+
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61

Query: 288 RH--EEPNKYQCAMCKK 302
            H       Y C     
Sbjct: 62  LHSDTRD--YICEFSGP 76

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 56.3 bits (137), Expect = 9e-11
 Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 2/54 (3%)

Query: 157 FKCDLCSRTFNSQSYLQQHKKHDHEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
           +KCD C  +F  +  L  HK   H G K Y+C  CG  + +  NLK H   H G
Sbjct: 18  YKCDRCQASFRYKGNLASHKT-VHTGEKPYRCNICGAQFNRPANLKTHTRIHSG 70

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 55.2 bits (134), Expect = 3e-10
 Identities = 20/71 (28%), Positives = 25/71 (35%), Gaps = 3/71 (4%)

Query: 170 SYLQQHKKHDHEGVK-YKCKECGKCYTQNTNLKQHMLSHKG-IFFICFHCNKNFTHRALL 227
            +   H        K YKC  C   +    NL  H   H G   + C  C   F   A L
Sbjct: 3   HHHHHHSH-MTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANL 61

Query: 228 VRHMQKHSSER 238
             H + HS E+
Sbjct: 62  KTHTRIHSGEK 72

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 47.1 bits (113), Expect = 2e-07
 Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 1/64 (1%)

Query: 227 LVRHMQKHSSER-FKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSLQDH 285
              H     S++ +KCD C     Y  +   H  +H G + + CN+C   F    +L+ H
Sbjct: 5   HHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTH 64

Query: 286 MQRH 289
            + H
Sbjct: 65  TRIH 68

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 44.8 bits (107), Expect = 1e-06
 Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 4/69 (5%)

Query: 253 HYLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRH--EEPNKYQCAMCKKQYASKKML 310
           H+  H  +    + ++C+ C   F  K +L  H   H  E+P  Y+C +C  Q+     L
Sbjct: 4   HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKP--YRCNICGAQFNRPANL 61

Query: 311 EKHIRRHEG 319
           + H R H G
Sbjct: 62  KTHTRIHSG 70

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 55.6 bits (135), Expect = 2e-10
 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)

Query: 157 FKCDLCSRTFNSQSYLQQHKKHDHEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
            KC  CS + +S++ L+ H++  H   + +KC  C     Q +NL +HM    G
Sbjct: 10  EKCSECSYSCSSKAALRIHER-IHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG 62

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 54.0 bits (131), Expect = 6e-10
 Identities = 14/60 (23%), Positives = 23/60 (38%), Gaps = 2/60 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKGIF-FICFHCNKNFTHRALLVRHMQKHSSE 237
                  KC EC    +    L+ H   H     F C +C+ +    + L +HM+K   +
Sbjct: 4   GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGD 63

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 51.0 bits (123), Expect = 6e-09
 Identities = 15/58 (25%), Positives = 20/58 (34%), Gaps = 1/58 (1%)

Query: 233 KHSSER-FKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRH 289
             SS    KC  C            H RIH      +CN C+       +L  HM++ 
Sbjct: 3   SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKF 60

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 37.5 bits (88), Expect = 3e-04
 Identities = 14/53 (26%), Positives = 21/53 (39%), Gaps = 1/53 (1%)

Query: 295 YQCAMCKKQYASKKMLEKHIRRHEGQD-YKCYICGNRYATQKYLEEHIRLHQG 346
            +C+ C    +SK  L  H R H     +KC  C         L +H++   G
Sbjct: 10  EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG 62

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 56.0 bits (136), Expect = 2e-10
 Identities = 19/84 (22%), Positives = 28/84 (33%), Gaps = 6/84 (7%)

Query: 199 NLKQHMLSHKGIF-FICFHCNKNFTHRALLVRHMQKHSSER-----FKCDLCGKVTPYYQ 252
           +      +H G   + C HC+K F  + LL  H +++         F C  CGK      
Sbjct: 2   SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61

Query: 253 HYLRHMRIHQGLEVHECNLCAKLF 276
              RH     G +  E        
Sbjct: 62  TMARHADNCAGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 52.9 bits (128), Expect = 2e-09
 Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 5/81 (6%)

Query: 253 HYLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNK----YQCAMCKKQYASKK 308
                 R H G + + C+ C K F  K+ L  H +R+ +PN     + C+ C K +  + 
Sbjct: 2   SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61

Query: 309 MLEKHIRRHEGQD-YKCYICG 328
            + +H     G D  +    G
Sbjct: 62  TMARHADNCAGPDGVEGENSG 82

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 51.4 bits (124), Expect = 6e-09
 Identities = 14/70 (20%), Positives = 27/70 (38%), Gaps = 5/70 (7%)

Query: 157 FKCDLCSRTFNSQSYLQQHKK-HDHEGVK---YKCKECGKCYTQNTNLKQHMLSHKGIF- 211
           + C  C +TF  +  L  H K +         + C +CGK +T+   + +H  +  G   
Sbjct: 16  YACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDG 75

Query: 212 FICFHCNKNF 221
               +   + 
Sbjct: 76  VEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 50.2 bits (121), Expect = 2e-08
 Identities = 13/81 (16%), Positives = 25/81 (30%), Gaps = 5/81 (6%)

Query: 227 LVRHMQKHSSER-FKCDLCGKVTPYYQHYLRHMRIHQGLEV----HECNLCAKLFACKRS 281
                + H+ E+ + C  C K     Q    H + +           C+ C K F  + +
Sbjct: 3   SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNT 62

Query: 282 LQDHMQRHEEPNKYQCAMCKK 302
           +  H      P+  +      
Sbjct: 63  MARHADNCAGPDGVEGENSGP 83

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 55.5 bits (135), Expect = 2e-10
 Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 1/77 (1%)

Query: 214 CFHCNKNFTHRALLVRHMQKHSSER-FKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLC 272
           C  C K+F   + L  H+  HS  R + C  CGK         +H  IH G + H+C +C
Sbjct: 4   CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVC 63

Query: 273 AKLFACKRSLQDHMQRH 289
            K F+   +L  H ++H
Sbjct: 64  GKAFSQSSNLITHSRKH 80

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 52.8 bits (128), Expect = 2e-09
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 2/54 (3%)

Query: 157 FKCDLCSRTFNSQSYLQQHKKHDHEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
           + C  C + F+ +S +++H    H G K +KC+ CGK ++Q++NL  H   H G
Sbjct: 30  YPCQYCGKRFHQKSDMKKHTF-IHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG 82

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 48.2 bits (116), Expect = 9e-08
 Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 4/83 (4%)

Query: 239 FKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRH--EEPNKYQ 296
           F C +CGK          H+ IH     + C  C K F  K  ++ H   H  E+P  ++
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKP--HK 59

Query: 297 CAMCKKQYASKKMLEKHIRRHEG 319
           C +C K ++    L  H R+H G
Sbjct: 60  CQVCGKAFSQSSNLITHSRKHTG 82

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 40.9 bits (97), Expect = 3e-05
 Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 5/82 (6%)

Query: 268 ECNLCAKLFACKRSLQDHMQRH--EEPNKYQCAMCKKQYASKKMLEKHIRRHEGQD-YKC 324
           +C +C K F    +L  H+  H    P  Y C  C K++  K  ++KH   H G+  +KC
Sbjct: 3   DCKICGKSFKRSSTLSTHLLIHSDTRP--YPCQYCGKRFHQKSDMKKHTFIHTGEKPHKC 60

Query: 325 YICGNRYATQKYLEEHIRLHQG 346
            +CG  ++    L  H R H G
Sbjct: 61  QVCGKAFSQSSNLITHSRKHTG 82

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 54.4 bits (132), Expect = 3e-10
 Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%)

Query: 185 YKCKECGKCYTQNTNLKQHMLSHKGIF-FICFHCNKNFTHRALLVRHMQK-HSSE 237
           + C+ C + + +  +LK+H  SH     + C  CN+ FT R LL+RH QK HS  
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN 57

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 45.2 bits (108), Expect = 6e-07
 Identities = 15/50 (30%), Positives = 24/50 (48%)

Query: 239 FKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQR 288
           F C++C +     +H  RH R H   + + C LC + F  +  L  H Q+
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQK 52

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 40.5 bits (96), Expect = 3e-05
 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)

Query: 212 FICFHCNKNFTHRALLVRHMQKHSSER-FKCDLCGKVTPYYQHYLRHM-RIHQG 263
           F+C  C + F  +  L RH + H++E+ + C LC +        +RH  +IH G
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 54.5 bits (132), Expect = 7e-10
 Identities = 28/114 (24%), Positives = 42/114 (36%), Gaps = 31/114 (27%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKGIF-FIC--FHCNKNFTHRALLVRHMQKHS 235
                      CGK YT++++LK H+ +H G   + C    C   F     L RH +KH+
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61

Query: 236 SERFKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRH 289
             R          P+                 +C  C + F+    L  HM+RH
Sbjct: 62  GHR----------PF-----------------QCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 49.8 bits (120), Expect = 3e-08
 Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 3/88 (3%)

Query: 233 KHSSER-FKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNL--CAKLFACKRSLQDHMQRH 289
           K ++        CGK      H   H+R H G + + C+   C   FA    L  H ++H
Sbjct: 1   KRTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKH 60

Query: 290 EEPNKYQCAMCKKQYASKKMLEKHIRRH 317
                +QC  C + ++    L  H++RH
Sbjct: 61  TGHRPFQCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 49.1 bits (118), Expect = 5e-08
 Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 5/83 (6%)

Query: 156 RFKCDLCSRTFNSQSYLQQHKKHDHEGVK-YKCK--ECGKCYTQNTNLKQHMLSHKGIF- 211
                 C +T+   S+L+ H +  H G K Y C    CG  + ++  L +H   H G   
Sbjct: 7   TCDYAGCGKTYTKSSHLKAHLR-THTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRP 65

Query: 212 FICFHCNKNFTHRALLVRHMQKH 234
           F C  C++ F+    L  HM++H
Sbjct: 66  FQCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 42.9 bits (102), Expect = 7e-06
 Identities = 21/89 (23%), Positives = 38/89 (42%), Gaps = 7/89 (7%)

Query: 261 HQGLEVHECNLCAKLFACKRSLQDHMQRH--EEPNKYQCAM--CKKQYASKKMLEKHIRR 316
                  +   C K +     L+ H++ H  E+P  Y C    C  ++A    L +H R+
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKP--YHCDWDGCGWKFARSDELTRHYRK 59

Query: 317 HEGQ-DYKCYICGNRYATQKYLEEHIRLH 344
           H G   ++C  C   ++   +L  H++ H
Sbjct: 60  HTGHRPFQCQKCDRAFSRSDHLALHMKRH 88

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 54.2 bits (131), Expect = 7e-10
 Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 7/84 (8%)

Query: 185 YKC--KECGKCYTQNTNLKQHMLSHKGIF-FICFH--CNKNFTHRALLVRHMQKHSSER- 238
           Y C  + CGK + ++  LK H  SH     + C H  C+K F+  + L RH + H+    
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61

Query: 239 FKCDLCGKVTPYYQHYLRHM-RIH 261
            K D C  V   +  YL+H+   H
Sbjct: 62  KKDDSCSFVGKTWTLYLKHVAECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 48.4 bits (116), Expect = 9e-08
 Identities = 18/83 (21%), Positives = 33/83 (39%), Gaps = 7/83 (8%)

Query: 157 FKCDL--CSRTFNSQSYLQQHKKHDHEGVK-YKCKE--CGKCYTQNTNLKQHMLSHKGIF 211
           + C    C + F   + L+ H+   H     Y+C    C K ++  + LK+H   H G  
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQF-SHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYP 60

Query: 212 -FICFHCNKNFTHRALLVRHMQK 233
                 C+       L ++H+ +
Sbjct: 61  CKKDDSCSFVGKTWTLYLKHVAE 83

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 45.7 bits (109), Expect = 8e-07
 Identities = 17/82 (20%), Positives = 27/82 (32%), Gaps = 4/82 (4%)

Query: 239 FKCDL--CGKVTPYYQHYLRHMRIHQGLEVHECN--LCAKLFACKRSLQDHMQRHEEPNK 294
           + C    CGK    +     H   H     +EC    C K F+    L+ H + H     
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61

Query: 295 YQCAMCKKQYASKKMLEKHIRR 316
            +   C     +  +  KH+  
Sbjct: 62  KKDDSCSFVGKTWTLYLKHVAE 83

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 39.5 bits (93), Expect = 1e-04
 Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 9/84 (10%)

Query: 266 VHECNL--CAKLFACKRSLQDHMQRH--EEPNKYQC--AMCKKQYASKKMLEKHIRRHEG 319
           ++ C+   C K F     L+ H   H  + P  Y+C    C K+++    L++H + H G
Sbjct: 1   MYVCHFENCGKAFKKHNQLKVHQFSHTQQLP--YECPHEGCDKRFSLPSRLKRHEKVHAG 58

Query: 320 QD-YKCYICGNRYATQKYLEEHIR 342
               K   C     T     +H+ 
Sbjct: 59  YPCKKDDSCSFVGKTWTLYLKHVA 82

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 54.0 bits (131), Expect = 7e-10
 Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 7/68 (10%)

Query: 148 HLLKHNWV-----RFKCDLCSRTFNSQSYLQQHKKHDHEGVK-YKCKECGKCYTQNTNLK 201
              +  W      R+KCD C ++F+  S L +H++  H G K YKC ECGK + Q ++L 
Sbjct: 5   SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRR-THTGEKPYKCDECGKAFIQRSHLI 63

Query: 202 QHMLSHKG 209
            H   H G
Sbjct: 64  GHHRVHTG 71

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 49.0 bits (118), Expect = 4e-08
 Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 3/71 (4%)

Query: 170 SYLQQHKKHDHEGVK-YKCKECGKCYTQNTNLKQHMLSHKGIF-FICFHCNKNFTHRALL 227
               + +       + YKC ECGK ++ +++L +H  +H G   + C  C K F  R+ L
Sbjct: 4   GSSGRSEWQ-QRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHL 62

Query: 228 VRHMQKHSSER 238
           + H + H+   
Sbjct: 63  IGHHRVHTGSG 73

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 45.1 bits (108), Expect = 1e-06
 Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 2/67 (2%)

Query: 223 HRALLVRHMQKHSSER-FKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRS 281
                 R   +    R +KCD CGK   +     +H R H G + ++C+ C K F  +  
Sbjct: 2   SSGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSH 61

Query: 282 LQDHMQR 288
           L  H  R
Sbjct: 62  LIGH-HR 67

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 39.3 bits (93), Expect = 1e-04
 Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 4/69 (5%)

Query: 253 HYLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRH--EEPNKYQCAMCKKQYASKKML 310
              R     +    ++C+ C K F+    L  H + H  E+P  Y+C  C K +  +  L
Sbjct: 5   SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKP--YKCDECGKAFIQRSHL 62

Query: 311 EKHIRRHEG 319
             H R H G
Sbjct: 63  IGHHRVHTG 71

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 54.4 bits (130), Expect = 1e-09
 Identities = 21/123 (17%), Positives = 35/123 (28%), Gaps = 21/123 (17%)

Query: 167 NSQSYLQQHKKHDHEGVKYKCKECGKCYTQNTNLKQHMLSHKGIFFICFHCNKNFTHRAL 226
           +S S  + +        K++CK+C   Y     L  HM                      
Sbjct: 2   SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETG------------------ 43

Query: 227 LVRHMQKHSSERFKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSLQDHM 286
              H +  + E    +      P  +  L         +V +C  C   F   + L  HM
Sbjct: 44  ---HYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHM 100

Query: 287 QRH 289
            + 
Sbjct: 101 IKT 103

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 51.3 bits (122), Expect = 2e-08
 Identities = 19/124 (15%), Positives = 34/124 (27%), Gaps = 23/124 (18%)

Query: 195 TQNTNLKQHMLSHKG-IFFICFHCNKNFTHRALLVRHMQKHSSERFKCDLCGKVTPYYQH 253
           +  ++ K +     G   F C  C+  +     L  HM +    R               
Sbjct: 2   SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDN------- 54

Query: 254 YLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKH 313
                           N        KRSL +   + +     +C  C   + S + L  H
Sbjct: 55  ---------------NNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVH 99

Query: 314 IRRH 317
           + + 
Sbjct: 100 MIKT 103

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 47.1 bits (111), Expect = 5e-07
 Identities = 17/95 (17%), Positives = 32/95 (33%), Gaps = 6/95 (6%)

Query: 257 HMRIHQGLEVHECNLCAKLFACKRSLQDHMQ-----RHEEPNKYQCAMCKKQYASKKMLE 311
           +  I  G     C  C+  +     L  HM      R +          +     K+ L 
Sbjct: 10  YGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLL 69

Query: 312 KHIRRHEGQD-YKCYICGNRYATQKYLEEHIRLHQ 345
           +   + + Q   KC  CG+ + + + L  H+   +
Sbjct: 70  EMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 41.7 bits (97), Expect = 4e-05
 Identities = 14/86 (16%), Positives = 24/86 (27%), Gaps = 6/86 (6%)

Query: 156 RFKCDLCSRTFNSQSYLQQHKKHDHEG-----VKYKCKECGKCYTQNTNLKQHMLSHKGI 210
           +F+C  CS  +++   L  H                         +  +L +        
Sbjct: 19  KFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQ 78

Query: 211 -FFICFHCNKNFTHRALLVRHMQKHS 235
               C +C  +F     L  HM K  
Sbjct: 79  KVLKCMYCGHSFESLQDLSVHMIKTK 104

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 51.3 bits (124), Expect = 4e-09
 Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 2/54 (3%)

Query: 157 FKCDLCSRTFNSQSYLQQHKKHDHEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
           + C  C + F+  S L QH++  H G K YKC ECGK ++QN+ L  H   H  
Sbjct: 15  YGCVECGKAFSRSSILVQHQR-VHTGEKPYKCLECGKAFSQNSGLINHQRIHTS 67

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 48.6 bits (117), Expect = 4e-08
 Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 3/69 (4%)

Query: 172 LQQHKKHDHEGVK-YKCKECGKCYTQNTNLKQHMLSHKGIF-FICFHCNKNFTHRALLVR 229
                   H G K Y C ECGK +++++ L QH   H G   + C  C K F+  + L+ 
Sbjct: 2   SSGSSG-IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLIN 60

Query: 230 HMQKHSSER 238
           H + H+S  
Sbjct: 61  HQRIHTSGP 69

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 43.6 bits (104), Expect = 3e-06
 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 2/63 (3%)

Query: 227 LVRHMQKHSSER-FKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSLQDH 285
                  HS E+ + C  CGK        ++H R+H G + ++C  C K F+    L +H
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61

Query: 286 MQR 288
            QR
Sbjct: 62  -QR 63

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 40.1 bits (95), Expect = 4e-05
 Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 4/66 (6%)

Query: 256 RHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRH--EEPNKYQCAMCKKQYASKKMLEKH 313
               IH G + + C  C K F+    L  H + H  E+P  Y+C  C K ++    L  H
Sbjct: 4   GSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKP--YKCLECGKAFSQNSGLINH 61

Query: 314 IRRHEG 319
            R H  
Sbjct: 62  QRIHTS 67

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 52.2 bits (126), Expect = 5e-09
 Identities = 24/98 (24%), Positives = 41/98 (41%), Gaps = 6/98 (6%)

Query: 196 QNTNLKQHMLSHKGIFFICFHCNKNFTHRALLVRHMQKHSSER-FKCDL--CGKVTPYYQ 252
            +    +    H   +     C K +T  + L  H++ H+ E+ +KC    C        
Sbjct: 5   SSGPDLEKRRIHYCDYP---GCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSD 61

Query: 253 HYLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHE 290
              RH R H G +  +C +C + F+    L  HM+RH+
Sbjct: 62  ELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 49.2 bits (118), Expect = 6e-08
 Identities = 23/100 (23%), Positives = 40/100 (40%), Gaps = 5/100 (5%)

Query: 221 FTHRALLVRHMQKHSSERFKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNL--CAKLFAC 278
                  +   + H  +      C KV     H   H+R H G + ++C    C   FA 
Sbjct: 3   SGSSGPDLEKRRIHYCD---YPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFAR 59

Query: 279 KRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHE 318
              L  H ++H     +QC +C + ++    L  H++RH+
Sbjct: 60  SDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 48.4 bits (116), Expect = 1e-07
 Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 5/79 (6%)

Query: 162 CSRTFNSQSYLQQHKKHDHEGVK-YKC--KECGKCYTQNTNLKQHMLSHKGIF-FICFHC 217
           C++ +   S+L+ H    H G K YKC  + C   + ++  L +H   H G   F C  C
Sbjct: 23  CTKVYTKSSHLKAHL-RTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVC 81

Query: 218 NKNFTHRALLVRHMQKHSS 236
           N++F+    L  HM++H +
Sbjct: 82  NRSFSRSDHLALHMKRHQN 100

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 45.7 bits (109), Expect = 1e-06
 Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 11/96 (11%)

Query: 255 LRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRH--EEPNKYQCAM--CKKQYASKKML 310
           L   RIH      +   C K++     L+ H++ H  E+P  Y+C    C  ++A    L
Sbjct: 10  LEKRRIHYC----DYPGCTKVYTKSSHLKAHLRTHTGEKP--YKCTWEGCDWRFARSDEL 63

Query: 311 EKHIRRHEGQ-DYKCYICGNRYATQKYLEEHIRLHQ 345
            +H R+H G   ++C +C   ++   +L  H++ HQ
Sbjct: 64  TRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 49.5 bits (117), Expect = 5e-08
 Identities = 17/96 (17%), Positives = 37/96 (38%), Gaps = 3/96 (3%)

Query: 262 QGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEGQD 321
           +  EV++C LC    +       H +     N   C  C  ++ S ++ ++H  + E + 
Sbjct: 12  ENKEVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQEHESKCEYKK 69

Query: 322 YKCYICGNRYATQKYLEEH-IRLHQGHTYMCNAKFS 356
             C  C   + +   +  H + +H  +     +  S
Sbjct: 70  LTCLECMRTFKSSFSIWRHQVEVHNQNNMAPTSGPS 105

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 45.7 bits (107), Expect = 1e-06
 Identities = 15/90 (16%), Positives = 27/90 (30%), Gaps = 2/90 (2%)

Query: 174 QHKKHDHEGVKYKCKECGKCYTQNTNLKQHMLSHKGIFFICFHCNKNFTHRALLVRHMQK 233
                      Y+C+ C    +       H    +    +C +C+  F    L   H  K
Sbjct: 6   SGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRNAA-VCPYCSLRFFSPELKQEHESK 64

Query: 234 HSSERFKCDLCGKVTPYYQHYLRH-MRIHQ 262
              ++  C  C +         RH + +H 
Sbjct: 65  CEYKKLTCLECMRTFKSSFSIWRHQVEVHN 94

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 43.7 bits (102), Expect = 7e-06
 Identities = 18/81 (22%), Positives = 30/81 (37%), Gaps = 2/81 (2%)

Query: 123 ATPLGTQFQCNVCFLMLNNRCYTRFHLLKHNWVRFKCDLCSRTFNSQSYLQQHKKHDHEG 182
                  +QC +C   L++      H          C  CS  F S    Q+H+    E 
Sbjct: 10  PVENKEVYQCRLCNAKLSSLLEQGSHERLC-RNAAVCPYCSLRFFSPELKQEHESK-CEY 67

Query: 183 VKYKCKECGKCYTQNTNLKQH 203
            K  C EC + +  + ++ +H
Sbjct: 68  KKLTCLECMRTFKSSFSIWRH 88

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 47.0 bits (111), Expect = 1e-07
 Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 1/56 (1%)

Query: 184 KYKCKECGKCYTQNTNLKQHMLSHKGIF-FICFHCNKNFTHRALLVRHMQKHSSER 238
           KY C+ECG    + + LK+H+ +H  +  + C +CN +F  +  L +HM+  +  +
Sbjct: 1   KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 41.6 bits (97), Expect = 1e-05
 Identities = 13/52 (25%), Positives = 22/52 (42%)

Query: 238 RFKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRH 289
           ++ C+ CG          +H+R H  +  + C  C   F  K +L  HM+  
Sbjct: 1   KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSK 52

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 41.2 bits (96), Expect = 1e-05
 Identities = 13/54 (24%), Positives = 22/54 (40%)

Query: 156 RFKCDLCSRTFNSQSYLQQHKKHDHEGVKYKCKECGKCYTQNTNLKQHMLSHKG 209
           ++ C+ C       S L++H +   +   Y C  C   +    NL +HM S   
Sbjct: 1   KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 39.3 bits (91), Expect = 8e-05
 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 1/54 (1%)

Query: 294 KYQCAMCKKQYASKKMLEKHIRRHEGQD-YKCYICGNRYATQKYLEEHIRLHQG 346
           KY C  C  +     ML+KHIR H     Y C  C   + T+  L +H++    
Sbjct: 1   KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 36.2 bits (83), Expect = 9e-04
 Identities = 12/53 (22%), Positives = 21/53 (39%)

Query: 267 HECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG 319
           + C  C         L+ H++ H +   Y C  C   + +K  L KH++    
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 46.0 bits (110), Expect = 2e-07
 Identities = 9/41 (21%), Positives = 17/41 (41%), Gaps = 1/41 (2%)

Query: 157 FKCDLCSRTFNSQSYLQQHKKHDHEGVK-YKCKECGKCYTQ 196
           + C  C + F+   +L  H K  H   + +KC+      + 
Sbjct: 13  YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 40.3 bits (95), Expect = 3e-05
 Identities = 15/69 (21%), Positives = 24/69 (34%), Gaps = 28/69 (40%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKGIFFICFHCNKNFTHRALLVRHMQKHSSER 238
               K Y C+ CGK +++  +L  H+   K +                       H+SER
Sbjct: 7   GSVGKPYICQSCGKGFSRPDHLNGHI---KQV-----------------------HTSER 40

Query: 239 -FKCDLCGK 246
             KC +   
Sbjct: 41  PHKCQVWVS 49

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 45.7 bits (108), Expect = 9e-07
 Identities = 18/86 (20%), Positives = 29/86 (33%), Gaps = 19/86 (22%)

Query: 157 FKCDLCSRTFNSQSYLQQHKKHDHEGVKYKCKECGKCYTQNTNLKQHMLSHKGIFFICFH 216
                C RTF++   L  H   +H  V    +    CY +                 C  
Sbjct: 26  RPKKSCDRTFSTMHELVTHVTMEH--VGGPEQNNHVCYWEE----------------CPR 67

Query: 217 CNKNFTHRALLVRHMQKHSSER-FKC 241
             K+F  +  LV H++ H+ E+    
Sbjct: 68  EGKSFKAKYKLVNHIRVHTGEKSGPS 93

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 38.8 bits (90), Expect = 2e-04
 Identities = 17/77 (22%), Positives = 24/77 (31%), Gaps = 11/77 (14%)

Query: 260 IHQGLEVHECNLCAKLFACKRSLQDHMQR----HEEPNKYQC-----AMCKKQYASKKML 310
           I +         C + F+    L  H+        E N + C         K + +K  L
Sbjct: 19  IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78

Query: 311 EKHIRRHEGQDYKCYIC 327
             HIR H G   K    
Sbjct: 79  VNHIRVHTG--EKSGPS 93

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 37.3 bits (86), Expect = 9e-04
 Identities = 13/68 (19%), Positives = 22/68 (32%), Gaps = 10/68 (14%)

Query: 212 FICFHCNKNFTHRALLVRHMQK----------HSSERFKCDLCGKVTPYYQHYLRHMRIH 261
                C++ F+    LV H+            H     +C   GK        + H+R+H
Sbjct: 26  RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVH 85

Query: 262 QGLEVHEC 269
            G +    
Sbjct: 86  TGEKSGPS 93

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G K YKC+ CG  + Q  +L+ H+L H G
Sbjct: 6   SGGEKPYKCETCGARFVQVAHLRAHVLIHTG 36

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 41.7 bits (99), Expect = 7e-06
 Identities = 11/31 (35%), Positives = 14/31 (45%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G K Y C+ CG  +     LK H+  H G
Sbjct: 6   SGGEKPYPCEICGTRFRHLQTLKSHLRIHTG 36

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 42.3 bits (99), Expect = 8e-06
 Identities = 15/72 (20%), Positives = 28/72 (38%), Gaps = 8/72 (11%)

Query: 168 SQSYLQQHKKHDHEGVK-YKCKECGKCYTQNTNLKQHMLSHKGIFFICFHCNKNFTHRAL 226
           S     + +K  H G +  KC +CG  + + + L +          +C  C K+    A 
Sbjct: 2   SSGSSGKRQK-IHLGDRSQKCSKCGIIFIRRSTLSRRKTP------MCEKCRKDSCQEAA 54

Query: 227 LVRHMQKHSSER 238
           L +     S ++
Sbjct: 55  LNKDEGNESGKK 66

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 42.0 bits (98), Expect = 1e-05
 Identities = 13/53 (24%), Positives = 19/53 (35%), Gaps = 7/53 (13%)

Query: 157 FKCDLCSRTFNSQSYLQQHKKHDHEGVKYKCKECGKCYTQNTNLKQHMLSHKG 209
            KC  C   F  +S L + K          C++C K   Q   L +   +  G
Sbjct: 19  QKCSKCGIIFIRRSTLSRRKT-------PMCEKCRKDSCQEAALNKDEGNESG 64

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 40.4 bits (94), Expect = 5e-05
 Identities = 12/65 (18%), Positives = 20/65 (30%), Gaps = 7/65 (10%)

Query: 256 RHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIR 315
           +  +IH G    +C+ C  +F                    C  C+K    +  L K   
Sbjct: 8   KRQKIHLGDRSQKCSKCGIIFI-------RRSTLSRRKTPMCEKCRKDSCQEAALNKDEG 60

Query: 316 RHEGQ 320
              G+
Sbjct: 61  NESGK 65

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 41.0 bits (97), Expect = 1e-05
 Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G K +KC+EC  C++Q ++L+ H   H G
Sbjct: 7   GMGEKTWKCRECDMCFSQASSLRLHQNVHVG 37

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.0 bits (97), Expect = 1e-05
 Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
               K ++C ECG+ +T  ++L QH   H G
Sbjct: 7   GSSTKSHQCHECGRGFTLKSHLNQHQRIHTG 37

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 40.7 bits (96), Expect = 2e-05
 Identities = 11/31 (35%), Positives = 14/31 (45%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G   Y C +CGK +TQ  +L  H  S   
Sbjct: 6   SGGETPYLCGQCGKSFTQRGSLAVHQRSCSQ 36

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 41.1 bits (97), Expect = 2e-05
 Identities = 15/64 (23%), Positives = 31/64 (48%), Gaps = 4/64 (6%)

Query: 176 KKHDHEGVK-YKC--KECGKCYTQNTNLKQHMLSHKGIF-FICFHCNKNFTHRALLVRHM 231
             +    ++ Y C  + C + ++++  L +H+  H G   F C  C +NF+    L  H+
Sbjct: 10  LNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHI 69

Query: 232 QKHS 235
           + H+
Sbjct: 70  RTHT 73

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 39.6 bits (93), Expect = 7e-05
 Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 4/66 (6%)

Query: 199 NLKQHMLSHKGIFFIC--FHCNKNFTHRALLVRHMQKHSSER-FKCDLCGKVTPYYQHYL 255
           NL  +++     +  C    C++ F+    L RH++ H+ ++ F+C +C +      H  
Sbjct: 8   NLLNYVVPKMRPY-ACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLT 66

Query: 256 RHMRIH 261
            H+R H
Sbjct: 67  THIRTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 39.2 bits (92), Expect = 1e-04
 Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 5/72 (6%)

Query: 276 FACKRSLQDHMQRHEEPNKYQCAM--CKKQYASKKMLEKHIRRHEGQD-YKCYICGNRYA 332
                +L +++     P  Y C +  C ++++    L +HIR H GQ  ++C IC   ++
Sbjct: 3   PHPMNNLLNYVVPKMRP--YACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFS 60

Query: 333 TQKYLEEHIRLH 344
              +L  HIR H
Sbjct: 61  RSDHLTTHIRTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 39.2 bits (92), Expect = 1e-04
 Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 4/54 (7%)

Query: 157 FKCDL--CSRTFNSQSYLQQHKKHDHEGVK-YKCKECGKCYTQNTNLKQHMLSH 207
           + C +  C R F+    L +H +  H G K ++C+ C + ++++ +L  H+ +H
Sbjct: 20  YACPVESCDRRFSRSDELTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 10/31 (32%), Positives = 13/31 (41%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             GV  YKC +C K ++    L  H   H  
Sbjct: 7   GAGVNPYKCSQCEKSFSGKLRLLVHQRMHTR 37

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 2/37 (5%)

Query: 174 QHKKHDHEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
                   G K YKC ECGK + ++T+L +H   H G
Sbjct: 2   SSGSS-GSGEKPYKCSECGKAFHRHTHLNEHRRIHTG 37

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 3e-05
 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
            EG K Y+C ECGK ++ +  L QH ++H  
Sbjct: 7   GEGEKPYQCSECGKSFSGSYRLTQHWITHTR 37

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 3e-05
 Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G K +KC+ECGK +TQN+ L  H   H G
Sbjct: 7   GSGEKPFKCEECGKRFTQNSQLHSHQRVHTG 37

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G K +KCKECGK + QN +L  H+  H G
Sbjct: 7   GSGEKPFKCKECGKAFRQNIHLASHLRIHTG 37

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%)

Query: 174 QHKKHDHEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
                   G K YKC ECGK +++N+ L QH   H G
Sbjct: 2   SSGSS-GTGEKRYKCNECGKVFSRNSQLSQHQKIHTG 37

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G K +KC EC K +TQ+++L  H   H G
Sbjct: 7   GAGKKLFKCNECKKTFTQSSSLTVHQRIHTG 37

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G K YKC ECGK +TQN++L  H   H G
Sbjct: 7   GSGEKPYKCNECGKVFTQNSHLTNHWRIHTG 37

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 39.8 bits (94), Expect = 4e-05
 Identities = 11/37 (29%), Positives = 17/37 (45%), Gaps = 2/37 (5%)

Query: 174 QHKKHDHEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
                   G + ++C +CGK + Q +N  QH   H G
Sbjct: 2   SSGSS-GHGERGHRCSDCGKFFLQASNFIQHRRIHTG 37

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 4e-05
 Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G K YKC ECGK Y +  +L  H   H G
Sbjct: 7   GSGEKPYKCVECGKGYKRRLDLDFHQRVHTG 37

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.5 bits (93), Expect = 4e-05
 Identities = 11/31 (35%), Positives = 20/31 (64%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G K ++CKECG  ++ + +L +H+ SH+ 
Sbjct: 7   GTGEKPFQCKECGMNFSWSCSLFKHLRSHER 37

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 4e-05
 Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G K Y+C ECGK +T  +NL  H   H G
Sbjct: 7   GTGEKPYRCAECGKAFTDRSNLFTHQKIHTG 37

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 41.8 bits (97), Expect = 4e-05
 Identities = 24/118 (20%), Positives = 44/118 (37%), Gaps = 4/118 (3%)

Query: 200 LKQHMLSHKGIFFICFHCNKNFTHRALLVRHMQKHSSERFKCDLCGKVTPYYQHYLRHMR 259
            K+++ +HKGIF       +       L    ++      K  +          YL  + 
Sbjct: 10  SKKYLSNHKGIF--IHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLL 67

Query: 260 IHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRH 317
             + +    C LC   F+   SL+ H++  E      C +CKK++ S      H+ + 
Sbjct: 68  ASKAISQFVCPLCLMPFSSSVSLKQHIRYTEHT--KVCPVCKKEFTSTDSALDHVCKK 123

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 40.3 bits (93), Expect = 1e-04
 Identities = 15/103 (14%), Positives = 31/103 (30%), Gaps = 1/103 (0%)

Query: 157 FKCDLCSRTFNSQSYLQQHKKHDHEGVKYKCKECGKCYTQNTNLKQHMLSHKGIFFICFH 216
               +          L   +K     +        +   +++ L + + S     F+C  
Sbjct: 20  IFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLASKAISQFVCPL 79

Query: 217 CNKNFTHRALLVRHMQKHSSERFKCDLCGKVTPYYQHYLRHMR 259
           C   F+    L +H++        C +C K        L H+ 
Sbjct: 80  CLMPFSSSVSLKQHIRYTEHT-KVCPVCKKEFTSTDSALDHVC 121

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 38.8 bits (89), Expect = 5e-04
 Identities = 16/119 (13%), Positives = 42/119 (35%), Gaps = 4/119 (3%)

Query: 224 RALLVRHMQKHSSERFKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSLQ 283
            +   +++  H        +  +    Y H L   +      + +  +       + S  
Sbjct: 7   DSGSKKYLSNHKG--IFIHVTLEELKRY-HQLTPEQKRLIRAIVKTLIHNPQLLDESSYL 63

Query: 284 DHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEGQDYKCYICGNRYATQKYLEEHIR 342
             +   +  +++ C +C   ++S   L++HIR  E     C +C   + +     +H+ 
Sbjct: 64  YRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTE-HTKVCPVCKKEFTSTDSALDHVC 121

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.5 bits (93), Expect = 5e-05
 Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G K ++C+ECGK +TQN++L  H   H G
Sbjct: 7   GSGEKPFQCEECGKRFTQNSHLHSHQRVHTG 37

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 5e-05
 Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G K YKC++CGK Y    NL  H   H G
Sbjct: 7   GTGEKPYKCEKCGKGYNSKFNLDMHQKVHTG 37

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 5e-05
 Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G K Y C ECGK +T  +NL +H   H  
Sbjct: 7   GTGEKPYICAECGKAFTIRSNLIKHQKIHTK 37

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 5e-05
 Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
               K YKC++CGK Y +  NL  H   H G
Sbjct: 7   GSVEKPYKCEDCGKGYNRRLNLDMHQRVHMG 37

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 6e-05
 Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G K +KC ECGK Y Q  +L QH   H G
Sbjct: 7   GTGEKPFKCGECGKSYNQRVHLTQHQRVHTG 37

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.1 bits (92), Expect = 6e-05
 Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G K Y+CKEC K + Q  +L QH   H G
Sbjct: 7   GSGKKPYECKECRKTFIQIGHLNQHKRVHTG 37

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 6e-05
 Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G K YKC ECGK +TQN++L  H   H G
Sbjct: 7   GTGEKPYKCNECGKVFTQNSHLANHQRIHTG 37

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 39.1 bits (92), Expect = 6e-05
 Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G K YKC+ECGK +    +L  H + H G
Sbjct: 7   GTGEKPYKCEECGKGFICRRDLYTHHMVHTG 37

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 6e-05
 Identities = 11/37 (29%), Positives = 16/37 (43%), Gaps = 2/37 (5%)

Query: 174 QHKKHDHEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
                   G K + C +CGK ++ +  L QH   H G
Sbjct: 2   SSGS-SGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTG 37

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 7e-05
 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G + Y C  CGK +T  +NL +H   H G
Sbjct: 7   GTGERPYICTVCGKAFTDRSNLIKHQKIHTG 37

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 7e-05
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G K YKC ECGK ++Q + L +H   H G
Sbjct: 7   GTGEKPYKCNECGKAFSQTSKLARHQRIHTG 37

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 7e-05
 Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G K YKC ECGK +TQN++L +H   H G
Sbjct: 7   GTGEKPYKCNECGKVFTQNSHLVRHRGIHTG 37

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 38.7 bits (91), Expect = 7e-05
 Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G K +KC ECGK +++ + L  H   H G
Sbjct: 7   GTGEKPFKCVECGKGFSRRSALNVHHKLHTG 37

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 8e-05
 Identities = 11/37 (29%), Positives = 15/37 (40%), Gaps = 2/37 (5%)

Query: 174 QHKKHDHEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
                   G K Y C  CGK +  + +L QH+  H  
Sbjct: 2   SSGS-SGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQ 37

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 38.7 bits (91), Expect = 8e-05
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G K Y+C +CGK ++Q  +L  H+  H G
Sbjct: 6   SGGEKPYRCDQCGKAFSQKGSLIVHIRVHTG 36

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 8e-05
 Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 2/37 (5%)

Query: 174 QHKKHDHEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
                   G K YKC ECGK +  ++NL  H + H G
Sbjct: 2   SSGS-SGTGEKPYKCNECGKAFRAHSNLTTHQVIHTG 37

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 8e-05
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G K Y+CK C K +TQ  +L QH  +H G
Sbjct: 7   GTGEKPYECKVCSKAFTQKAHLAQHQKTHTG 37

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 8e-05
 Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G K Y+C ECGK + Q  NL QH   H G
Sbjct: 7   GTGEKPYRCGECGKAFAQKANLTQHQRIHTG 37

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 9e-05
 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G K Y+C ECGK ++Q + L +H   H G
Sbjct: 7   GTGGKPYQCNECGKAFSQTSKLARHQRVHTG 37

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 38.3 bits (90), Expect = 9e-05
 Identities = 11/37 (29%), Positives = 15/37 (40%), Gaps = 2/37 (5%)

Query: 174 QHKKHDHEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
                     K Y C ECGK +T+  +L +H   H  
Sbjct: 2   SSGSS-GTDSKSYNCNECGKAFTRIFHLTRHQKIHTR 37

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 1e-04
 Identities = 10/31 (32%), Positives = 17/31 (54%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G + +KC ECGK + + ++L  H+  H  
Sbjct: 7   GSGERPFKCNECGKGFGRRSHLAGHLRLHSR 37

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 1e-04
 Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 2/37 (5%)

Query: 174 QHKKHDHEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
                   G K YKC+ CGK +  +++L QH   H G
Sbjct: 2   SSGS-SGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSG 37

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G K YKC  CGK ++Q+++L+ H   H G
Sbjct: 7   GMGEKCYKCDVCGKEFSQSSHLQTHQRVHTG 37

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 2/37 (5%)

Query: 174 QHKKHDHEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
                   G K YKC ECGK +  N+ L +H   H G
Sbjct: 2   SSGSS-GTGEKPYKCNECGKVFRHNSYLSRHQRIHTG 37

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G K YKC ECGK +TQN++L +H   H G
Sbjct: 7   GTGEKPYKCNECGKVFTQNSHLARHRGIHTG 37

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G K YKC ECGK +  N++  QH   H G
Sbjct: 7   GTGEKPYKCMECGKAFGDNSSCTQHQRLHTG 37

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G K YKC ECGK +TQN++L +H   H G
Sbjct: 7   GTGKKPYKCNECGKVFTQNSHLARHRGIHTG 37

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 11/31 (35%), Positives = 14/31 (45%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G K  KC ECGK +   + L  H  +H  
Sbjct: 7   GTGEKPCKCTECGKAFCWKSQLIMHQRTHVD 37

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G K YKC +CGK +T  + L+ H   H G
Sbjct: 7   GTGEKPYKCSDCGKSFTWKSRLRIHQKCHTG 37

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G K Y C+ECGK +  ++ L++H   H G
Sbjct: 7   GTGEKPYNCEECGKAFIHDSQLQEHQRIHTG 37

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G K YKC +CGK +T+ + L  H  SH G
Sbjct: 7   GTGEKPYKCSDCGKAFTRKSGLHIHQQSHTG 37

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.2 bits (90), Expect = 1e-04
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G K YKC ECGK + +N++L +H L H G
Sbjct: 7   GTGEKPYKCHECGKVFRRNSHLARHQLIHTG 37

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G K YKC ECGK +TQN++L +H   H G
Sbjct: 7   GTGEKPYKCNECGKVFTQNSHLARHRRVHTG 37

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G K Y CKECGK +++   L +H   H G
Sbjct: 7   GTGEKLYNCKECGKSFSRAPCLLKHERLHSG 37

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G + +KC ECGK + Q+ +L QH   H G
Sbjct: 7   GTGERPHKCNECGKSFIQSAHLIQHQRIHTG 37

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G K +KC+ECGK +  N+    H  SH G
Sbjct: 7   GSGEKPFKCEECGKGFYTNSQCYSHQRSHSG 37

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.2 bits (90), Expect = 1e-04
 Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G   + C ECGK +T  TNL  H   H G
Sbjct: 7   GTGENPFICSECGKVFTHKTNLIIHQKIHTG 37

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 10/31 (32%), Positives = 15/31 (48%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G K +KC  CGK +   + L +H + H  
Sbjct: 7   GTGEKPFKCDICGKSFCGRSRLNRHSMVHTA 37

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G K Y+CKECGK ++Q T+L QH   H G
Sbjct: 7   GTGEKPYECKECGKAFSQTTHLIQHQRVHTG 37

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G K Y C ECGK + Q ++L +H   H G
Sbjct: 7   GTGEKPYICNECGKSFIQKSHLNRHRRIHTG 37

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 37.7 bits (88), Expect = 2e-04
 Identities = 11/31 (35%), Positives = 14/31 (45%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G K Y C EC + ++ N  L QH   H  
Sbjct: 5   SSGEKPYSCAECKETFSDNNRLVQHQKMHTV 35

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 10/31 (32%), Positives = 18/31 (58%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G + Y C ECGK + ++++L +H+  H  
Sbjct: 7   GSGERPYGCNECGKNFGRHSHLIEHLKRHFR 37

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 11/37 (29%), Positives = 14/37 (37%), Gaps = 2/37 (5%)

Query: 174 QHKKHDHEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
                   G K YKC  C K +   ++L  H   H G
Sbjct: 2   SSGS-SGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTG 37

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 11/37 (29%), Positives = 14/37 (37%), Gaps = 2/37 (5%)

Query: 174 QHKKHDHEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
                   G K Y C  CGK +  +  L +H   H G
Sbjct: 2   SSGS-SGSGEKPYVCDYCGKAFGLSAELVRHQRIHTG 37

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 8/31 (25%), Positives = 13/31 (41%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G K + C  C K ++  + L  H  +H  
Sbjct: 5   SSGEKPFGCSCCEKAFSSKSYLLVHQQTHAE 35

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G   Y+C ECGK +++   L  H  +H G
Sbjct: 7   GTGENPYECCECGKVFSRKDQLVSHQKTHSG 37

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G K ++C EC K +   +NL  H  +H G
Sbjct: 7   GTGEKPFECSECQKAFNTKSNLIVHQRTHTG 37

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G K Y+C +CGK + + + L  H   H G
Sbjct: 7   GTGEKPYECSDCGKSFIKKSQLHVHQRIHTG 37

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             GVK Y C ECGK ++  ++L  H + H G
Sbjct: 7   GTGVKPYMCNECGKAFSVYSSLTTHQVIHTG 37

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G K ++C ECGK +T+ + L  H   H G
Sbjct: 7   GTGGKHFECTECGKAFTRKSTLSMHQKIHTG 37

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 37.2 bits (87), Expect = 3e-04
 Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G K Y CKECGK +   + L +H   H G
Sbjct: 7   GTGEKPYNCKECGKSFRWASCLLKHQRVHSG 37

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G K Y+C  CGK +T+ + L  H   H G
Sbjct: 7   GTGEKPYECSICGKSFTKKSQLHVHQQIHTG 37

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G K Y+C  CGK ++   +L  H   H G
Sbjct: 7   GTGEKPYECSVCGKAFSHRQSLSVHQRIHSG 37

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 11/31 (35%), Positives = 14/31 (45%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G K ++C  CGK +    NL  H   H G
Sbjct: 7   GTGQKPFECTHCGKSFRAKGNLVTHQRIHTG 37

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G K Y+C EC K +   +NL  H  +H G
Sbjct: 7   GTGEKPYECNECQKAFNTKSNLMVHQRTHTG 37

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             GVK Y C +C K ++  + L  H  SH G
Sbjct: 7   GTGVKPYGCSQCAKTFSLKSQLIVHQRSHTG 37

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G K Y+C +CGK ++  ++L  H   H G
Sbjct: 7   GTGEKPYECNQCGKAFSVRSSLTTHQAIHTG 37

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G K ++C ECGK ++ ++ L  H   H G
Sbjct: 7   GTGEKPFECAECGKSFSISSQLATHQRIHTG 37

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 4e-04
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G K ++C+ECGK ++ N+ L  H   H G
Sbjct: 7   GTGEKPHECRECGKSFSFNSQLIVHQRIHTG 37

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.8 bits (86), Expect = 4e-04
 Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G K Y C ECGK ++  + L  HM +H G
Sbjct: 7   GAGEKPYGCSECGKAFSSKSYLIIHMRTHSG 37

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 36.8 bits (86), Expect = 4e-04
 Identities = 11/25 (44%), Positives = 15/25 (60%)

Query: 185 YKCKECGKCYTQNTNLKQHMLSHKG 209
           Y+C+ECGK + Q  +L  H   H G
Sbjct: 11  YECQECGKSFRQKGSLTLHERIHTG 35

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 4e-04
 Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G K YKC ECGK +   ++L  H  +H G
Sbjct: 7   GTGEKPYKCNECGKAFRARSSLAIHQATHSG 37

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 4e-04
 Identities = 11/37 (29%), Positives = 16/37 (43%), Gaps = 2/37 (5%)

Query: 174 QHKKHDHEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
                   G K Y+C  C K ++ + +L QH   H G
Sbjct: 2   SSGS-SGTGEKPYECDVCRKAFSHHASLTQHQRVHSG 37

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 36.8 bits (86), Expect = 4e-04
 Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G K + C ECGK +   + L+ H   H G
Sbjct: 7   GSGEKSHTCDECGKNFCYISALRIHQRVHMG 37

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 36.7 bits (86), Expect = 4e-04
 Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G + Y+C ECGK +   ++L  H  SH G
Sbjct: 7   GTGQRPYECIECGKAFKTKSSLICHRRSHTG 37

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 36.7 bits (86), Expect = 5e-04
 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G K Y+C ECGK +   + L  H  +H G
Sbjct: 7   GSGEKPYECNECGKAFIWKSLLIVHERTHAG 37

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 5e-04
 Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 2/37 (5%)

Query: 174 QHKKHDHEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
                   G + Y+C ECGK + Q + L  H   H+G
Sbjct: 2   SSGS-SGTGERHYECSECGKAFIQKSTLSMHQRIHRG 37

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 5e-04
 Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G   Y+C ECGK +++   L  H  +H G
Sbjct: 7   GTGENPYECHECGKAFSRKYQLISHQRTHAG 37

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 36.3 bits (85), Expect = 5e-04
 Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G   Y+C ECGK + +   L  H  +H G
Sbjct: 5   SSGENPYECSECGKAFNRKDQLISHQRTHAG 35

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 5e-04
 Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G K Y C ECGK ++Q + L  H  +H G
Sbjct: 7   GSGEKPYGCNECGKTFSQKSILSAHQRTHTG 37

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 36.3 bits (85), Expect = 5e-04
 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
             G+K Y C ECGK +   + L  H  +H G
Sbjct: 7   GTGMKPYVCNECGKAFRSKSYLIIHTRTHTG 37

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 36.0 bits (84), Expect = 7e-04
 Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 1/25 (4%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQH 203
             G K Y+C ECGK + QNT+L +H
Sbjct: 7   GTGKKPYECIECGKAFIQNTSLIRH 31

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	360
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	100.0
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.97
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.95
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.95
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.91
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.91
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.91
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.91
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.9
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.9
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.89
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.89
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.89
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.88
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.82
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.82
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.81
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.81
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.8
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.79
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.79
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.79
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.78
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.77
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.77
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.77
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.76
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.76
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.76
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.74
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.74
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.74
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.74
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.73
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.73
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.71
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.71
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.71
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.69
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.68
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.66
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.64
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.63
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.62
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.62
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.61
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.6
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.59
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.59
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.58
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.57
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.56
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.55
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.55
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.54
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.54
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.54
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.53
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.52
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.52
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.52
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.51
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.51
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.49
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.48
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.48
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.48
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.46
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.46
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.46
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.41
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.41
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.41
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.4
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.39
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.37
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.37
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.35
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.33
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.29
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.22
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.21
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.21
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.21
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.2
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.2
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.2
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.2
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.2
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.2
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.19
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.19
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.19
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.19
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.19
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.19
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.19
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.19
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.19
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.19
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.19
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.19
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.19
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.19
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.19
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.19
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.19
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.19
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.19
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.19
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.18
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.18
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.18
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.18
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.18
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.18
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.18
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.18
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.18
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.18
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.18
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.18
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.18
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.18
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.18
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.18
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.18
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.18
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.18
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.18
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.18
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.18
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.18
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.18
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.18
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.18
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.17
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.17
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.17
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.17
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.17
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.17
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.17
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.17
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.17
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.17
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.17
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.17
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.17
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.17
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.17
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.17
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.17
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.16
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.16
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.16
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.16
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.16
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.16
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.16
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.16
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.16
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.16
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.16
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.16
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.16
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.15
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.15
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.15
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.15
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.15
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.15
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.14
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.14
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.14
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.13
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.13
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.12
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.12
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.11
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.1
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.1
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.07
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.06
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.06
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.05
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.05
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.05
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.05
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.05
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.05
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.05
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.05
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.05
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.04
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.04
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.04
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.04
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.04
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.04
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.04
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.04
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.04
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.04
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.04
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.04
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.03
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.03
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.03
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.03
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.03
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.03
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.03
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.03
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.03
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.03
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.03
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.03
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.03
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.03
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	99.02
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.02
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.02
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.02
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.02
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.02
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.02
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.02
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.02
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.02
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.02
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.02
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.02
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.02
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.02
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.01
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.01
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.01
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.01
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.01
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.01
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.01
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.01
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.0
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.0
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.0
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.0
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.0
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.0
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.0
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.0
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.99
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.99
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.99
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.98
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.98
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.98
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.98
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.97
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.97
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.97
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.97
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.97
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.97
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.97
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.97
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.96
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.95
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.95
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.94
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.94
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.94
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.93
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.93
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.93
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.91
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.91
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.91
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.9
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.9
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.9
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.89
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.89
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.88
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.85
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.85
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.84
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.82
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.81
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.78
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.7
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.7
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.68
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.6
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.6
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.59
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.58
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.57
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.53
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.53
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.53
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.49
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.49
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.46
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.45
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.45
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.42
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.42
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.42
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.41
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.4
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.36
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.36
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.36
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.36
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.35
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.33
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.32
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.32
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.31
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.31
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.31
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.31
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.31
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.3
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.3
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.29
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.28
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.27
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.26
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.25
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.23
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.23
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.21
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.21
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.21
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.2
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.19
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.18
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.18
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.18
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.47
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.17
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.17
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.17
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.16
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.16
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.15
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.14
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.11
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.1
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.09
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.09
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.08
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.35
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.34
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.06
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.06
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.05
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.01
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.01
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.01
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.26
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.0
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.99
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.22
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.18
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.85
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.77
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	97.32
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.31
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.3
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	96.81
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.52
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.26
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.24
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.02
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.39
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	94.87
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	93.24
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	92.44
2k9h_A	57	Glycoprotein; hantavirus, zinc finger, CCHC, metal	87.59
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	83.27
2yuc_A	76	TNF receptor-associated factor 4; ZF-TRAF, cystein	82.55
2jvx_A	28	NF-kappa-B essential modulator; CCHC classical zin	82.55
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	82.02
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	81.97
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	81.3
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	81.22

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=3.6e-39  Score=268.03  Aligned_cols=181  Identities=31%  Similarity=0.624  Sum_probs=135.5

Q ss_pred             HHHHHHHHHHcCCCceeecccccccccChhHHHHHHHhcCC-CCCcCccccccccCHHHHHHHHhhcCCC-CcccCCCCC
Q psy6525         169 QSYLQQHKKHDHEGVKYKCKECGKCYTQNTNLKQHMLSHKG-IFFICFHCNKNFTHRALLVRHMQKHSSE-RFKCDLCGK  246 (360)
Q Consensus       169 ~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~  246 (360)
                      ...|..|+..+.++.+|.|+.|++.|.+...|..|++.|.+ .+|.|+.|++.|.+...|..|++.|++. +|.|+.|++
T Consensus         6 ~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~   85 (190)
T 2i13_A            6 SSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGK   85 (190)
T ss_dssp             -------------------------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCC
T ss_pred             hccchhhhhhcCCCCCCcCCCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCC
Confidence            34566777777777788888888888888888888887765 3788888888888888888888887765 799999999


Q ss_pred             ccCCHHHHHHHHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Cccccc
Q psy6525         247 VTPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCY  325 (360)
Q Consensus       247 ~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~  325 (360)
                      .|.+...|..|++.|.++++|.|+.|++.|.+...|..|+++|++++||.|++|++.|.+...|..|+++|++ +||+|+
T Consensus        86 ~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  165 (190)
T 2i13_A           86 SFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCP  165 (190)
T ss_dssp             EESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECT
T ss_pred             ccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECC
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999988 699999


Q ss_pred             ccccccCChHHHHHHHHHhCCC-Cc
Q psy6525         326 ICGNRYATQKYLEEHIRLHQGH-TY  349 (360)
Q Consensus       326 ~C~~~f~~~~~l~~H~~~h~g~-~~  349 (360)
                      +|++.|.+...|..|+++|+|+ ||
T Consensus       166 ~C~~~f~~~~~L~~H~~~H~~~k~~  190 (190)
T 2i13_A          166 ECGKSFSRRDALNVHQRTHTGKKTS  190 (190)
T ss_dssp             TTCCEESSHHHHHHHHTTC------
T ss_pred             CCCCccCCHHHHHHHHHhcCCCCCC
Confidence            9999999999999999999997 64

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=1.2e-37  Score=258.86  Aligned_cols=179  Identities=28%  Similarity=0.605  Sum_probs=121.7

Q ss_pred             HHHHHHHHcC-CcccccccccccccCHHHHHHHHHHcCCCceeecccccccccChhHHHHHHHhcCC-CCCcCccccccc
Q psy6525         144 YTRFHLLKHN-WVRFKCDLCSRTFNSQSYLQQHKKHDHEGVKYKCKECGKCYTQNTNLKQHMLSHKG-IFFICFHCNKNF  221 (360)
Q Consensus       144 ~l~~H~~~h~-~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C~~~f  221 (360)
                      .|..|+..|. .++|.|++|++.|.+...|..|++.+++..+|.|+.|++.|.+...|..|++.|.+ .+|.|++|++.|
T Consensus         8 ~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f   87 (190)
T 2i13_A            8 SSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSF   87 (190)
T ss_dssp             -----------------------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEE
T ss_pred             cchhhhhhcCCCCCCcCCCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCcc
Confidence            4455555553 55677777777777777777777776666677777777777777777777777654 367777777777


Q ss_pred             cCHHHHHHHHhhcCCC-CcccCCCCCccCCHHHHHHHHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccc
Q psy6525         222 THRALLVRHMQKHSSE-RFKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMC  300 (360)
Q Consensus       222 ~~~~~l~~H~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  300 (360)
                      .+...|..|++.|+++ +|.|+.|++.|.+...|..|+++|+++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus        88 ~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  167 (190)
T 2i13_A           88 SQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPEC  167 (190)
T ss_dssp             SCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTT
T ss_pred             CCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECCCC
Confidence            7777777777777654 788888888888888888888888888888888888888888888888888888888888888


Q ss_pred             hhhhcCHHHHHHHHhhhcC-Ccc
Q psy6525         301 KKQYASKKMLEKHIRRHEG-QDY  322 (360)
Q Consensus       301 ~~~f~~~~~L~~H~~~h~~-~~~  322 (360)
                      ++.|.+...|..|+++|+| +||
T Consensus       168 ~~~f~~~~~L~~H~~~H~~~k~~  190 (190)
T 2i13_A          168 GKSFSRRDALNVHQRTHTGKKTS  190 (190)
T ss_dssp             CCEESSHHHHHHHHTTC------
T ss_pred             CCccCCHHHHHHHHHhcCCCCCC
Confidence            8888888888888888887 343

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=100.00  E-value=9.5e-33  Score=229.24  Aligned_cols=163  Identities=30%  Similarity=0.575  Sum_probs=125.4

Q ss_pred             ceeec--ccccccccChhHHHHHHHhcCC-CCCcC--ccccccccCHHHHHHHHhhcCCC-CcccC--CCCCccCCHHHH
Q psy6525         183 VKYKC--KECGKCYTQNTNLKQHMLSHKG-IFFIC--FHCNKNFTHRALLVRHMQKHSSE-RFKCD--LCGKVTPYYQHY  254 (360)
Q Consensus       183 ~~~~C--~~C~~~f~~~~~l~~H~~~h~~-~~~~C--~~C~~~f~~~~~l~~H~~~h~~~-~~~C~--~C~~~f~~~~~l  254 (360)
                      .+|.|  +.|++.|.+...|..|++.|.+ .+|.|  +.|++.|.+...|..|++.|+++ +|.|+  .|++.|.+...|
T Consensus        11 ~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l   90 (190)
T 1tf6_A           11 KRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANM   90 (190)
T ss_dssp             CCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHH
T ss_pred             cceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHH
Confidence            34555  4566666555556666555543 35666  55666666666666666666654 67777  788888888888


Q ss_pred             HHHH-HHh-cCCCcccc--cccccccCChhHHHHhHhhhcCCCcccccc--chhhhcCHHHHHHHHhhhcCCcccccc--
Q psy6525         255 LRHM-RIH-QGLEVHEC--NLCAKLFACKRSLQDHMQRHEEPNKYQCAM--CKKQYASKKMLEKHIRRHEGQDYKCYI--  326 (360)
Q Consensus       255 ~~H~-~~h-~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~C~~--  326 (360)
                      ..|+ +.| .++++|.|  +.|++.|.+...|..|+++|++++||.|++  |++.|.+...|..|+++|++  |.|.+  
T Consensus        91 ~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~--~~C~~~~  168 (190)
T 1tf6_A           91 KKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG--YPCKKDD  168 (190)
T ss_dssp             HHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS--CCCCSTT
T ss_pred             HHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC--CcCCCCC
Confidence            8887 455 36778999  889999999999999999999999999987  99999999999999999888  88999  


Q ss_pred             -cccccCChHHHHHHHHHhCCC
Q psy6525         327 -CGNRYATQKYLEEHIRLHQGH  347 (360)
Q Consensus       327 -C~~~f~~~~~l~~H~~~h~g~  347 (360)
                       |++.|.+...|..|+++|+|+
T Consensus       169 ~C~~~f~~~~~l~~H~~~h~~e  190 (190)
T 1tf6_A          169 SCSFVGKTWTLYLKHVAECHQD  190 (190)
T ss_dssp             TCCCCCSCHHHHHHHHTTCC--
T ss_pred             cCCCccccHHHHHHHHHhhcCC
Confidence             999999999999999999875

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.97  E-value=2.5e-31  Score=220.68  Aligned_cols=163  Identities=26%  Similarity=0.482  Sum_probs=122.8

Q ss_pred             Cccccc--ccccccccCHHHHHHHHHHcCCCceeec--ccccccccChhHHHHHHHhcCC-CCCcCc--cccccccCHHH
Q psy6525         154 WVRFKC--DLCSRTFNSQSYLQQHKKHDHEGVKYKC--KECGKCYTQNTNLKQHMLSHKG-IFFICF--HCNKNFTHRAL  226 (360)
Q Consensus       154 ~~~~~C--~~C~~~f~~~~~l~~H~~~~h~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~-~~~~C~--~C~~~f~~~~~  226 (360)
                      .++|.|  +.|++.|.+...|..|++.|+++.+|.|  +.|++.|.+...|..|+++|.+ .+|.|+  .|++.|.+...
T Consensus        10 ~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~   89 (190)
T 1tf6_A           10 YKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKAN   89 (190)
T ss_dssp             CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHH
T ss_pred             CcceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHH
Confidence            345666  4566666666666666666666666666  5666666666666666666654 356666  67777777777


Q ss_pred             HHHHH-hhcC--CCCccc--CCCCCccCCHHHHHHHHHHhcCCCcccccc--cccccCChhHHHHhHhhhcCCCcccccc
Q psy6525         227 LVRHM-QKHS--SERFKC--DLCGKVTPYYQHYLRHMRIHQGLEVHECNL--CAKLFACKRSLQDHMQRHEEPNKYQCAM  299 (360)
Q Consensus       227 l~~H~-~~h~--~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~  299 (360)
                      |..|+ ..|.  ..+|.|  +.|++.|.+...|..|+++|+++++|.|++  |+++|.+...|..|+++|++   |.|+.
T Consensus        90 l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~---~~C~~  166 (190)
T 1tf6_A           90 MKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKK  166 (190)
T ss_dssp             HHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS---CCCCS
T ss_pred             HHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC---CcCCC
Confidence            77776 3332  237888  889999988899999988899999999977  99999999999999999887   88888


Q ss_pred             ---chhhhcCHHHHHHHHhhhcC
Q psy6525         300 ---CKKQYASKKMLEKHIRRHEG  319 (360)
Q Consensus       300 ---C~~~f~~~~~L~~H~~~h~~  319 (360)
                         |++.|.+...|..|+++|++
T Consensus       167 ~~~C~~~f~~~~~l~~H~~~h~~  189 (190)
T 1tf6_A          167 DDSCSFVGKTWTLYLKHVAECHQ  189 (190)
T ss_dssp             TTTCCCCCSCHHHHHHHHTTCC-
T ss_pred             CCcCCCccccHHHHHHHHHhhcC
Confidence               99999999999999998876

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.95  E-value=1.1e-28  Score=197.79  Aligned_cols=106  Identities=27%  Similarity=0.588  Sum_probs=87.2

Q ss_pred             cCCCCCccCCHHHHHHHHHHhcCCCcccccc--cccccCChhHHHHhHhhhcCCCcccccc--chhhhcCHHHHHHHH-h
Q psy6525         241 CDLCGKVTPYYQHYLRHMRIHQGLEVHECNL--CAKLFACKRSLQDHMQRHEEPNKYQCAM--CKKQYASKKMLEKHI-R  315 (360)
Q Consensus       241 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~-~  315 (360)
                      |..|++.|.+...|..|+++|+++++|.|++  |++.|.+...|..|+++|+++++|.|++  |++.|.+...|..|+ +
T Consensus        42 C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~  121 (155)
T 2gli_A           42 CSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNR  121 (155)
T ss_dssp             CTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHH
T ss_pred             ccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHH
Confidence            4555688888888888888888888888875  8888888888888888888888888887  888888888888887 6


Q ss_pred             hhcC-Ccccccc--cccccCChHHHHHHHHHhCC
Q psy6525         316 RHEG-QDYKCYI--CGNRYATQKYLEEHIRLHQG  346 (360)
Q Consensus       316 ~h~~-~~~~C~~--C~~~f~~~~~l~~H~~~h~g  346 (360)
                      +|.+ ++|+|++  |++.|.+...|..|+++|+|
T Consensus       122 ~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A          122 THSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             TTCSCCCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             hcCCCCCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence            7776 5788887  88888888888888888876

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.95  E-value=4.3e-28  Score=194.32  Aligned_cols=143  Identities=29%  Similarity=0.581  Sum_probs=122.9

Q ss_pred             cccccccccccccCHHHHHHHHH---HcCCCceeecccccccccChhHHHHHHHhcCCCCCcCccccccccCHHHHHHHH
Q psy6525         155 VRFKCDLCSRTFNSQSYLQQHKK---HDHEGVKYKCKECGKCYTQNTNLKQHMLSHKGIFFICFHCNKNFTHRALLVRHM  231 (360)
Q Consensus       155 ~~~~C~~C~~~f~~~~~l~~H~~---~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~  231 (360)
                      .+|.|+.|++.|.+...|..|++   .+.+..+|.|+.|+                      |..|++.|.+...|..|+
T Consensus         2 ~~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~----------------------C~~c~~~f~~~~~l~~H~   59 (155)
T 2gli_A            2 TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGG----------------------CSRELRPFKAQYMLVVHM   59 (155)
T ss_dssp             CBCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTT----------------------CTTTTCCCSSHHHHHHHT
T ss_pred             CcCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCC----------------------ccchhhhhhhHHHHHHHH
Confidence            35667777777777777777776   33445567776652                      677779999999999999


Q ss_pred             hhcCCC-CcccCC--CCCccCCHHHHHHHHHHhcCCCcccccc--cccccCChhHHHHhH-hhhcCCCcccccc--chhh
Q psy6525         232 QKHSSE-RFKCDL--CGKVTPYYQHYLRHMRIHQGLEVHECNL--CAKLFACKRSLQDHM-QRHEEPNKYQCAM--CKKQ  303 (360)
Q Consensus       232 ~~h~~~-~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~~~~~C~~--C~~~  303 (360)
                      +.|++. +|.|++  |++.|.+...|..|+++|+++++|.|++  |++.|.+...|..|+ ++|.+++||.|++  |++.
T Consensus        60 ~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~  139 (155)
T 2gli_A           60 RRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKR  139 (155)
T ss_dssp             HHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCE
T ss_pred             HhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccc
Confidence            988775 899986  9999999999999999999999999998  999999999999999 7899999999998  9999


Q ss_pred             hcCHHHHHHHHhhhcC
Q psy6525         304 YASKKMLEKHIRRHEG  319 (360)
Q Consensus       304 f~~~~~L~~H~~~h~~  319 (360)
                      |.+...|..|+++|+|
T Consensus       140 f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A          140 YTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             ESSHHHHHHHHHHSCC
T ss_pred             cCCHHHHHHHHHhhcC
Confidence            9999999999999875

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.91  E-value=2.7e-25  Score=172.09  Aligned_cols=103  Identities=21%  Similarity=0.424  Sum_probs=78.0

Q ss_pred             hhcCCC-CcccCCCCCccCCHHHHHHHHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccchhhhcCHHHH
Q psy6525         232 QKHSSE-RFKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKML  310 (360)
Q Consensus       232 ~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L  310 (360)
                      .+|.|+ +|.|++|+++|.+...|..|+++|.++++|.|++|++.|.+...|..|+++|++++||.|++|++.|.+...|
T Consensus        15 ~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L   94 (133)
T 2lt7_A           15 LIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFM   94 (133)
T ss_dssp             EEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHH
T ss_pred             eecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHHHH
Confidence            345554 6788888888888888888888888888888888888888888888888888888888888888888888888


Q ss_pred             HHHHhhhcC-------CcccccccccccCCh
Q psy6525         311 EKHIRRHEG-------QDYKCYICGNRYATQ  334 (360)
Q Consensus       311 ~~H~~~h~~-------~~~~C~~C~~~f~~~  334 (360)
                      ..|+++|++       ++|+|.+|++.|...
T Consensus        95 ~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~~  125 (133)
T 2lt7_A           95 SSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQ  125 (133)
T ss_dssp             HHHHHHHTCCCTTSSSCCEEECCCCSSCCCC
T ss_pred             HHHhHHhcCCCCCCCCCCeecCCCCchhhhc
Confidence            888877654       247777777777643

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.91  E-value=2.7e-24  Score=165.36  Aligned_cols=111  Identities=27%  Similarity=0.549  Sum_probs=99.3

Q ss_pred             CCcccCCCCCccCCHHHHHHHHHHhcCCCcccccccccccCChhHHHHhHhh---hcCCCccccccchhhhcCHHHHHHH
Q psy6525         237 ERFKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQR---HEEPNKYQCAMCKKQYASKKMLEKH  313 (360)
Q Consensus       237 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~---h~~~~~~~C~~C~~~f~~~~~L~~H  313 (360)
                      .+|.|+.|++.|.+...|..|+++|.++++|.|++|++.|.+...|..|++.   +.++++|.|++|++.|.+...|..|
T Consensus         6 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H   85 (124)
T 2dlq_A            6 SGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLH   85 (124)
T ss_dssp             SSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHH
T ss_pred             CCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHH
Confidence            4789999999999999999999999999999999999999999999999985   5778899999999999999999999


Q ss_pred             HhhhcC-CcccccccccccCChHHHHHHHHH-hCCC
Q psy6525         314 IRRHEG-QDYKCYICGNRYATQKYLEEHIRL-HQGH  347 (360)
Q Consensus       314 ~~~h~~-~~~~C~~C~~~f~~~~~l~~H~~~-h~g~  347 (360)
                      +++|++ +||+|++|++.|.+...|..|++. |.|+
T Consensus        86 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  121 (124)
T 2dlq_A           86 MVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGP  121 (124)
T ss_dssp             HHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSSCS
T ss_pred             HHHcCCCCCccCCCccchhCCHHHHHHHHHHHCCCC
Confidence            999987 689999999999999999999975 5553

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.91  E-value=1.6e-24  Score=165.43  Aligned_cols=108  Identities=28%  Similarity=0.629  Sum_probs=98.6

Q ss_pred             CCcccCC--CCCccCCHHHHHHHHHHhcCCCccccc--ccccccCChhHHHHhHhhhcCCCccccccchhhhcCHHHHHH
Q psy6525         237 ERFKCDL--CGKVTPYYQHYLRHMRIHQGLEVHECN--LCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEK  312 (360)
Q Consensus       237 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~  312 (360)
                      ++|.|.+  |++.|.+...|..|+++|.++++|.|+  .|++.|.+...|..|+++|+++++|.|++|++.|.+...|..
T Consensus         5 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   84 (119)
T 2jp9_A            5 RPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKT   84 (119)
T ss_dssp             CCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHH
T ss_pred             eeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHHHH
Confidence            4788987  999999999999999999999999998  699999999999999999999999999999999999999999


Q ss_pred             HHhhhcC-Ccccc--cccccccCChHHHHHHHHHh
Q psy6525         313 HIRRHEG-QDYKC--YICGNRYATQKYLEEHIRLH  344 (360)
Q Consensus       313 H~~~h~~-~~~~C--~~C~~~f~~~~~l~~H~~~h  344 (360)
                      |+++|++ ++|+|  +.|++.|.+...|..|+++|
T Consensus        85 H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           85 HTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             HHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            9999887 68999  78999999999999999876

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.91  E-value=1.4e-24  Score=173.75  Aligned_cols=115  Identities=24%  Similarity=0.499  Sum_probs=88.5

Q ss_pred             CcccCCCCCccCCHHHHHHHHHH-hcCCCc--------ccccccccccCChhHHHHhHhhhcCCCcccccc--chhhhcC
Q psy6525         238 RFKCDLCGKVTPYYQHYLRHMRI-HQGLEV--------HECNLCAKLFACKRSLQDHMQRHEEPNKYQCAM--CKKQYAS  306 (360)
Q Consensus       238 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~--------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~  306 (360)
                      +|.|..|++.|.+...|..|++. |.+..+        |.|++|++.|.+...|..|+++|+++++|.|++  |++.|.+
T Consensus        25 ~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~  104 (155)
T 2rpc_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFAR  104 (155)
T ss_dssp             SSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESC
T ss_pred             ccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCC
Confidence            46666666666666666666665 444433        678888888888888888888888888888877  8888888


Q ss_pred             HHHHHHHHhhhcC-Ccccccc--cccccCChHHHHHHHHHhCCC-CccCC
Q psy6525         307 KKMLEKHIRRHEG-QDYKCYI--CGNRYATQKYLEEHIRLHQGH-TYMCN  352 (360)
Q Consensus       307 ~~~L~~H~~~h~~-~~~~C~~--C~~~f~~~~~l~~H~~~h~g~-~~~C~  352 (360)
                      ...|..|+++|++ ++|+|.+  |++.|.+...|..|+++|+|+ ||.|.
T Consensus       105 ~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A          105 SENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             HHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred             HHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            8888888888877 5788886  888888888888888888887 78774

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.90  E-value=1.6e-24  Score=166.70  Aligned_cols=110  Identities=29%  Similarity=0.583  Sum_probs=96.8

Q ss_pred             CCcccC--CCCCccCCHHHHHHHHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCcccccc--chhhhcCHHHHHH
Q psy6525         237 ERFKCD--LCGKVTPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAM--CKKQYASKKMLEK  312 (360)
Q Consensus       237 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~  312 (360)
                      .+|.|+  .|++.|.+...|..|+++| ++++|.|++|++.|.+...|..|+++|+++++|.|++  |++.|.+...|..
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~   82 (124)
T 1ubd_C            4 RTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT   82 (124)
T ss_dssp             -CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHH
T ss_pred             CcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHH
Confidence            468888  7999999999999999888 8888999999999999999999999999999999976  9999999999999


Q ss_pred             HHhhhcC-Cccccc--ccccccCChHHHHHHHHHhCCC
Q psy6525         313 HIRRHEG-QDYKCY--ICGNRYATQKYLEEHIRLHQGH  347 (360)
Q Consensus       313 H~~~h~~-~~~~C~--~C~~~f~~~~~l~~H~~~h~g~  347 (360)
                      |+++|++ ++|.|+  .|++.|.+...|..|+++|+|+
T Consensus        83 H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~  120 (124)
T 1ubd_C           83 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKA  120 (124)
T ss_dssp             HHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC--
T ss_pred             HHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHccc
Confidence            9999887 689996  4999999999999999999986

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.90  E-value=6.4e-25  Score=169.99  Aligned_cols=103  Identities=25%  Similarity=0.535  Sum_probs=93.1

Q ss_pred             HHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-CcccccccccccCChH
Q psy6525         257 HMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYICGNRYATQK  335 (360)
Q Consensus       257 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~C~~~f~~~~  335 (360)
                      |.++|.|+++|.|++|++.|.+...|..|+++|++++||.|++|++.|.+...|..|+++|++ +||.|++||+.|.+..
T Consensus        13 ~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~   92 (133)
T 2lt7_A           13 YELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQ   92 (133)
T ss_dssp             EEEEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHH
T ss_pred             ceeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHH
Confidence            344678999999999999999999999999999999999999999999999999999999988 6999999999999999


Q ss_pred             HHHHHHHHhCCC-------CccCCCcccccC
Q psy6525         336 YLEEHIRLHQGH-------TYMCNAKFSFNE  359 (360)
Q Consensus       336 ~l~~H~~~h~g~-------~~~C~~c~~~f~  359 (360)
                      .|..|+++|+|+       +|.|..|++.|.
T Consensus        93 ~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~  123 (133)
T 2lt7_A           93 FMSSHIKSVHSQDPSGDSKLYRLHPCRSLQI  123 (133)
T ss_dssp             HHHHHHHHHTCCCTTSSSCCEEECCCCSSCC
T ss_pred             HHHHHhHHhcCCCCCCCCCCeecCCCCchhh
Confidence            999999998874       478999998874

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.89  E-value=1.1e-23  Score=168.53  Aligned_cols=115  Identities=23%  Similarity=0.453  Sum_probs=94.5

Q ss_pred             CCcCccccccccCHHHHHHHHhh-cCCC---------CcccCCCCCccCCHHHHHHHHHHhcCCCcccccc--cccccCC
Q psy6525         211 FFICFHCNKNFTHRALLVRHMQK-HSSE---------RFKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNL--CAKLFAC  278 (360)
Q Consensus       211 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~---------~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~  278 (360)
                      .|.|+.|++.|.+...|..|++. |.+.         .|.|..|++.|.+...|..|+++|+++++|.|.+  |++.|.+
T Consensus        25 ~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~  104 (155)
T 2rpc_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFAR  104 (155)
T ss_dssp             SSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESC
T ss_pred             ccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCC
Confidence            45666666666666666666665 3332         2789999999999999999999999999999988  9999999


Q ss_pred             hhHHHHhHhhhcCCCcccccc--chhhhcCHHHHHHHHhhhcC-Cccccc
Q psy6525         279 KRSLQDHMQRHEEPNKYQCAM--CKKQYASKKMLEKHIRRHEG-QDYKCY  325 (360)
Q Consensus       279 ~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~-~~~~C~  325 (360)
                      ...|..|+++|+++++|.|++  |++.|.+...|..|+++|++ +||.|+
T Consensus       105 ~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A          105 SENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             HHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred             HHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            999999999999999999997  99999999999999999887 688885

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.89  E-value=5.9e-23  Score=157.79  Aligned_cols=110  Identities=31%  Similarity=0.596  Sum_probs=86.0

Q ss_pred             CCCcCccccccccCHHHHHHHHhhcCCC-CcccCCCCCccCCHHHHHHHHHH---hcCCCcccccccccccCChhHHHHh
Q psy6525         210 IFFICFHCNKNFTHRALLVRHMQKHSSE-RFKCDLCGKVTPYYQHYLRHMRI---HQGLEVHECNLCAKLFACKRSLQDH  285 (360)
Q Consensus       210 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~---h~~~~~~~C~~C~~~f~~~~~l~~H  285 (360)
                      .+|.|++|++.|.+...|..|++.|+++ +|.|+.|++.|.+...|..|++.   +.++++|.|++|++.|.+...|..|
T Consensus         6 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H   85 (124)
T 2dlq_A            6 SGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLH   85 (124)
T ss_dssp             SSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHH
T ss_pred             CCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHH
Confidence            3567777777777777777777776654 67788888888788888888775   4667788888888888888888888


Q ss_pred             HhhhcCCCccccccchhhhcCHHHHHHHHhh-hcC
Q psy6525         286 MQRHEEPNKYQCAMCKKQYASKKMLEKHIRR-HEG  319 (360)
Q Consensus       286 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~-h~~  319 (360)
                      +++|++++||.|++|++.|.+...|..|++. |.+
T Consensus        86 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  120 (124)
T 2dlq_A           86 MVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG  120 (124)
T ss_dssp             HHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSSC
T ss_pred             HHHcCCCCCccCCCccchhCCHHHHHHHHHHHCCC
Confidence            8888888888888888888888888888875 444

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.89  E-value=3.1e-23  Score=158.14  Aligned_cols=108  Identities=29%  Similarity=0.619  Sum_probs=97.4

Q ss_pred             CCCcCcc--ccccccCHHHHHHHHhhcCCC-CcccC--CCCCccCCHHHHHHHHHHhcCCCcccccccccccCChhHHHH
Q psy6525         210 IFFICFH--CNKNFTHRALLVRHMQKHSSE-RFKCD--LCGKVTPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSLQD  284 (360)
Q Consensus       210 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~-~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~  284 (360)
                      .+|.|++  |++.|.+...|..|++.|++. +|.|+  .|++.|.+...|..|+++|+++++|.|++|++.|.+...|..
T Consensus         5 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   84 (119)
T 2jp9_A            5 RPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKT   84 (119)
T ss_dssp             CCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHH
T ss_pred             eeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHHHH
Confidence            4678876  888888888888888887764 79998  699999999999999999999999999999999999999999


Q ss_pred             hHhhhcCCCcccc--ccchhhhcCHHHHHHHHhhh
Q psy6525         285 HMQRHEEPNKYQC--AMCKKQYASKKMLEKHIRRH  317 (360)
Q Consensus       285 H~~~h~~~~~~~C--~~C~~~f~~~~~L~~H~~~h  317 (360)
                      |+++|+++++|.|  +.|++.|.+...|..|+++|
T Consensus        85 H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           85 HTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             HHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            9999999999999  88999999999999999876

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.88  E-value=7.6e-23  Score=157.23  Aligned_cols=104  Identities=28%  Similarity=0.579  Sum_probs=50.9

Q ss_pred             cccccccCHHHHHHHHhhcCCCCcccCCCCCccCCHHHHHHHHHHhcCCCcccccc--cccccCChhHHHHhHhhhcCCC
Q psy6525         216 HCNKNFTHRALLVRHMQKHSSERFKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNL--CAKLFACKRSLQDHMQRHEEPN  293 (360)
Q Consensus       216 ~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~  293 (360)
                      .|++.|.+...|..|++.|...+|.|+.|++.|.+...|..|+++|.++++|.|++  |++.|.+...|..|+++|++++
T Consensus        12 ~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~   91 (124)
T 1ubd_C           12 GCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDR   91 (124)
T ss_dssp             TCCCEESSHHHHHHHHGGGSCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHHHHHHHCCC
T ss_pred             CCcCccCCHHHHHHHHHHcCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCCCC
Confidence            44444444444444444443334445555555555555555555555555555543  5555555555555555555555


Q ss_pred             ccccc--cchhhhcCHHHHHHHHhhhcC
Q psy6525         294 KYQCA--MCKKQYASKKMLEKHIRRHEG  319 (360)
Q Consensus       294 ~~~C~--~C~~~f~~~~~L~~H~~~h~~  319 (360)
                      +|.|+  .|++.|.+...|..|+++|++
T Consensus        92 ~~~C~~~~C~~~f~~~~~L~~H~~~H~~  119 (124)
T 1ubd_C           92 PYVCPFDGCNKKFAQSTNLKSHILTHAK  119 (124)
T ss_dssp             CCCCCSTTCCCCCSSTTTTHHHHHHHC-
T ss_pred             ceECCCCCCCCccCCHHHHHHHHHHHcc
Confidence            55553  255555555555555555544

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.82  E-value=2.2e-20  Score=139.23  Aligned_cols=89  Identities=24%  Similarity=0.523  Sum_probs=68.6

Q ss_pred             CCCcccccccccccCChhHHHHhHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-CcccccccccccCChHHHHHHH
Q psy6525         263 GLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYICGNRYATQKYLEEHI  341 (360)
Q Consensus       263 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~C~~~f~~~~~l~~H~  341 (360)
                      ++++|.|.+|++.|.+...|..|+++|+++++|.|++|++.|.+...|..|+++|++ ++|+|.+|++.|.+...|..|+
T Consensus        14 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~   93 (106)
T 2ee8_A           14 TKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHK   93 (106)
T ss_dssp             CCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHH
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHH
Confidence            456677777777777777777777777777778888888888888888888777776 5788888888888888888888


Q ss_pred             HHhCCC-CccC
Q psy6525         342 RLHQGH-TYMC  351 (360)
Q Consensus       342 ~~h~g~-~~~C  351 (360)
                      ++|+|+ +|.+
T Consensus        94 ~~H~~~~~~~~  104 (106)
T 2ee8_A           94 TLHMQTSSPTA  104 (106)
T ss_dssp             HHTTSCCCCCC
T ss_pred             HHhCCCCCCcC
Confidence            888776 6644

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.82  E-value=1.9e-20  Score=136.91  Aligned_cols=87  Identities=32%  Similarity=0.634  Sum_probs=78.1

Q ss_pred             hcCCCcccccccccccCChhHHHHhHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-CcccccccccccCChHHHHH
Q psy6525         261 HQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYICGNRYATQKYLEE  339 (360)
Q Consensus       261 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~C~~~f~~~~~l~~  339 (360)
                      +.++++|.|++|++.|.+...|..|+++|.++++|.|++|++.|.+...|..|+++|++ ++|+|++|++.|.+...|..
T Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   82 (96)
T 2dmd_A            3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTV   82 (96)
T ss_dssp             CCCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHH
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHH
Confidence            35678899999999999999999999999999999999999999999999999999887 68999999999999999999


Q ss_pred             HHHHhCCC
Q psy6525         340 HIRLHQGH  347 (360)
Q Consensus       340 H~~~h~g~  347 (360)
                      |+++|+|+
T Consensus        83 H~~~h~~~   90 (96)
T 2dmd_A           83 HLRSHTGD   90 (96)
T ss_dssp             HHTTCCSC
T ss_pred             HHHHhcCC
Confidence            99999987

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.81  E-value=1.4e-20  Score=133.33  Aligned_cols=81  Identities=31%  Similarity=0.700  Sum_probs=50.1

Q ss_pred             cccccccccccCChhHHHHhHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-CcccccccccccCChHHHHHHHHHh
Q psy6525         266 VHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYICGNRYATQKYLEEHIRLH  344 (360)
Q Consensus       266 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~C~~~f~~~~~l~~H~~~h  344 (360)
                      ||.|++|++.|.+...|..|+++|.++++|.|+.|++.|.+...|..|+++|++ ++|.|++|++.|.+...|..|+++|
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   80 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKH   80 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhh
Confidence            355666666666666666666666666666666666666666666666666555 4566666666666666666666666


Q ss_pred             CC
Q psy6525         345 QG  346 (360)
Q Consensus       345 ~g  346 (360)
                      +|
T Consensus        81 ~g   82 (82)
T 2kmk_A           81 TG   82 (82)
T ss_dssp             C-
T ss_pred             CC
Confidence            54

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.81  E-value=1.7e-20  Score=135.40  Aligned_cols=85  Identities=27%  Similarity=0.644  Sum_probs=62.1

Q ss_pred             CCCccccc--ccccccCChhHHHHhHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-CcccccccccccCChHHHHH
Q psy6525         263 GLEVHECN--LCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYICGNRYATQKYLEE  339 (360)
Q Consensus       263 ~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~C~~~f~~~~~l~~  339 (360)
                      |+++|.|+  .|++.|.+...|..|+++|.++++|.|+.|++.|.+...|..|+++|++ ++|.|++|++.|.+...|..
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   80 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKR   80 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHH
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHH
Confidence            35677776  4777777777777777777777777777777777777777777777766 57777777777777777777


Q ss_pred             HHHHhCCC
Q psy6525         340 HIRLHQGH  347 (360)
Q Consensus       340 H~~~h~g~  347 (360)
                      |+++|+|+
T Consensus        81 H~~~H~~~   88 (90)
T 1a1h_A           81 HTKIHLRQ   88 (90)
T ss_dssp             HHGGGGC-
T ss_pred             HHHHhccc
Confidence            77777764

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.80  E-value=5.2e-20  Score=130.32  Aligned_cols=82  Identities=28%  Similarity=0.582  Sum_probs=77.0

Q ss_pred             CcccCCCCCccCCHHHHHHHHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccchhhhcCHHHHHHHHhhh
Q psy6525         238 RFKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRH  317 (360)
Q Consensus       238 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h  317 (360)
                      ||.|..|++.|.+...|..|+++|.++++|.|+.|++.|.+...|..|+++|+++++|.|++|++.|.+...|..|+++|
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   80 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKH   80 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhh
Confidence            58899999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             cC
Q psy6525         318 EG  319 (360)
Q Consensus       318 ~~  319 (360)
                      +|
T Consensus        81 ~g   82 (82)
T 2kmk_A           81 TG   82 (82)
T ss_dssp             C-
T ss_pred             CC
Confidence            75

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.79  E-value=1e-19  Score=132.66  Aligned_cols=86  Identities=29%  Similarity=0.694  Sum_probs=74.1

Q ss_pred             cCCCcccccccccccCChhHHHHhHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC---CcccccccccccCChHHHH
Q psy6525         262 QGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG---QDYKCYICGNRYATQKYLE  338 (360)
Q Consensus       262 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~---~~~~C~~C~~~f~~~~~l~  338 (360)
                      .++++|.|.+|++.|.+...|..|+++|+++++|.|++|++.|.+...|..|++.|++   ++|+|++|++.|.+...|.
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~   82 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLN   82 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHH
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHH
Confidence            4677888888998888888888998888888889999999999999999999888876   5889999999999999999


Q ss_pred             HHHH-HhCCC
Q psy6525         339 EHIR-LHQGH  347 (360)
Q Consensus       339 ~H~~-~h~g~  347 (360)
                      .|++ +|.|.
T Consensus        83 ~H~~~~H~~~   92 (95)
T 2yt9_A           83 GHIKQVHSGP   92 (95)
T ss_dssp             HHHHHTSCCC
T ss_pred             HHHHHhcCCC
Confidence            9986 67665

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.79  E-value=3.2e-20  Score=138.59  Aligned_cols=93  Identities=16%  Similarity=0.295  Sum_probs=78.7

Q ss_pred             HHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-CcccccccccccCChHH
Q psy6525         258 MRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYICGNRYATQKY  336 (360)
Q Consensus       258 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~C~~~f~~~~~  336 (360)
                      ++.|.++++|.|.+|++.|.+...|..|+++|.  ++|.|++|++.|.+...|..|++ |++ ++|+|.+|++.|.+...
T Consensus         8 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~--~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~   84 (107)
T 1wjp_A            8 ASPVENKEVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFS   84 (107)
T ss_dssp             CCCCCCCCCCBCTTTCCBCSSHHHHHHHHHHHH--HSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHH
T ss_pred             CcccCCCcCeECCCCCCccCCHHHHHHHHHHCC--CCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHH
Confidence            345778888999999999999999999998884  68999999999999999999985 776 68999999999999999


Q ss_pred             HHHHHH-HhCCC-CccCCC
Q psy6525         337 LEEHIR-LHQGH-TYMCNA  353 (360)
Q Consensus       337 l~~H~~-~h~g~-~~~C~~  353 (360)
                      |..|++ +|+++ +|.|..
T Consensus        85 L~~H~~~~H~~~~~~~~~~  103 (107)
T 1wjp_A           85 IWRHQVEVHNQNNMAPTSG  103 (107)
T ss_dssp             HHHHHHHTSCCCCCCCCCC
T ss_pred             HHHHHHHHcCCCCCCCCCC
Confidence            999997 78877 777653

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.79  E-value=2.6e-19  Score=133.31  Aligned_cols=88  Identities=25%  Similarity=0.514  Sum_probs=78.9

Q ss_pred             CCcccCCCCCccCCHHHHHHHHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccchhhhcCHHHHHHHHhh
Q psy6525         237 ERFKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRR  316 (360)
Q Consensus       237 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~  316 (360)
                      .+|.|..|++.|.+...|..|++.|.++++|.|++|++.|.+...|..|+++|+++++|.|++|++.|.+...|..|+++
T Consensus        16 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~   95 (106)
T 2ee8_A           16 KEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTL   95 (106)
T ss_dssp             CCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHHHH
T ss_pred             cCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHHHH
Confidence            37899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcC-Ccccc
Q psy6525         317 HEG-QDYKC  324 (360)
Q Consensus       317 h~~-~~~~C  324 (360)
                      |++ ++|.+
T Consensus        96 H~~~~~~~~  104 (106)
T 2ee8_A           96 HMQTSSPTA  104 (106)
T ss_dssp             TTSCCCCCC
T ss_pred             hCCCCCCcC
Confidence            987 56653

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.78  E-value=3.5e-21  Score=145.79  Aligned_cols=93  Identities=18%  Similarity=0.295  Sum_probs=48.8

Q ss_pred             HHHHHHHhcCCCcccccccccccCChhHHHHhHhh--hcCCCccc-cccchhhh--cCHHHHHHHHhhhcC-Cccccccc
Q psy6525         254 YLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQR--HEEPNKYQ-CAMCKKQY--ASKKMLEKHIRRHEG-QDYKCYIC  327 (360)
Q Consensus       254 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~-C~~C~~~f--~~~~~L~~H~~~h~~-~~~~C~~C  327 (360)
                      |..|+++|+++++|.|++|++.|.+...|..|+++  |.+.+++. |++|++.|  .+...|..|+++|++ +||+|++|
T Consensus         7 l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~C   86 (115)
T 2dmi_A            7 GKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYC   86 (115)
T ss_dssp             CCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCSSS
T ss_pred             hhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceECCCC
Confidence            33444455555555555555555555555555555  44444332 55555555  555555555555554 45555555


Q ss_pred             ccccCChHHHHHHHHHhCC
Q psy6525         328 GNRYATQKYLEEHIRLHQG  346 (360)
Q Consensus       328 ~~~f~~~~~l~~H~~~h~g  346 (360)
                      ++.|.+...|..|+++|+.
T Consensus        87 ~k~f~~~~~L~~H~~~hh~  105 (115)
T 2dmi_A           87 GHSFESLQDLSVHMIKTKH  105 (115)
T ss_dssp             CCBCSSHHHHHHHHHHTTT
T ss_pred             CCccCCHHHHHHHHHHhCC
Confidence            5555555555555555444

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.77  E-value=2e-19  Score=134.94  Aligned_cols=85  Identities=28%  Similarity=0.611  Sum_probs=59.2

Q ss_pred             hcCCCcccccccccccCChhHHHHhHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-CcccccccccccCChHHHHH
Q psy6525         261 HQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYICGNRYATQKYLEE  339 (360)
Q Consensus       261 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~C~~~f~~~~~l~~  339 (360)
                      |.++++|.| .|++.|.+...|..|++.|.++++|.|++|++.|.+...|..|+++|++ ++|+|++|++.|.+...|..
T Consensus         5 h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   83 (110)
T 2csh_A            5 SSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHR   83 (110)
T ss_dssp             CCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHHH
T ss_pred             CCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHHH
Confidence            556666777 6777777777777777777777777777777777777777777776665 46777777777777777777


Q ss_pred             HHHHhCC
Q psy6525         340 HIRLHQG  346 (360)
Q Consensus       340 H~~~h~g  346 (360)
                      |+++|++
T Consensus        84 H~~~~~~   90 (110)
T 2csh_A           84 HVTSCTK   90 (110)
T ss_dssp             HHHHHHH
T ss_pred             HHHHccc
Confidence            7766654

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.77  E-value=3.6e-19  Score=130.00  Aligned_cols=84  Identities=29%  Similarity=0.610  Sum_probs=69.4

Q ss_pred             CCcccCCCCCccCCHHHHHHHHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccchhhhcCHHHHHHHHhh
Q psy6525         237 ERFKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRR  316 (360)
Q Consensus       237 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~  316 (360)
                      .+|.|.+|++.|.+...|..|++.|.++++|.|++|++.|.+...|..|+++|+++++|.|++|++.|.+...|..|+++
T Consensus         7 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   86 (96)
T 2dmd_A            7 GPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRS   86 (96)
T ss_dssp             CCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHHHTT
T ss_pred             cCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHH
Confidence            36788888888888888888888888888888888888888888888888888888888888888888888888888888


Q ss_pred             hcCC
Q psy6525         317 HEGQ  320 (360)
Q Consensus       317 h~~~  320 (360)
                      |+++
T Consensus        87 h~~~   90 (96)
T 2dmd_A           87 HTGD   90 (96)
T ss_dssp             CCSC
T ss_pred             hcCC
Confidence            8763

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.77  E-value=5.5e-19  Score=127.36  Aligned_cols=84  Identities=24%  Similarity=0.603  Sum_probs=76.7

Q ss_pred             CCcccC--CCCCccCCHHHHHHHHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccchhhhcCHHHHHHHH
Q psy6525         237 ERFKCD--LCGKVTPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHI  314 (360)
Q Consensus       237 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~  314 (360)
                      ++|.|+  .|++.|.+...|..|+++|.++++|.|+.|++.|.+...|..|+++|+++++|.|++|++.|.+...|..|+
T Consensus         3 k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   82 (90)
T 1a1h_A            3 RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHT   82 (90)
T ss_dssp             CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHH
T ss_pred             CceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHHH
Confidence            478898  599999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhcCC
Q psy6525         315 RRHEGQ  320 (360)
Q Consensus       315 ~~h~~~  320 (360)
                      ++|+++
T Consensus        83 ~~H~~~   88 (90)
T 1a1h_A           83 KIHLRQ   88 (90)
T ss_dssp             GGGGC-
T ss_pred             HHhccc
Confidence            999873

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.76  E-value=5.3e-20  Score=139.24  Aligned_cols=96  Identities=20%  Similarity=0.267  Sum_probs=86.2

Q ss_pred             HHHHHHHHhhcCCC-CcccCCCCCccCCHHHHHHHHHH--hcCCCccc-cccccccc--CChhHHHHhHhhhcCCCcccc
Q psy6525         224 RALLVRHMQKHSSE-RFKCDLCGKVTPYYQHYLRHMRI--HQGLEVHE-CNLCAKLF--ACKRSLQDHMQRHEEPNKYQC  297 (360)
Q Consensus       224 ~~~l~~H~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~-C~~C~~~f--~~~~~l~~H~~~h~~~~~~~C  297 (360)
                      ...|..|++.|+++ +|.|..|++.|.+...|..|+++  |.+.+++. |++|++.|  .....|..|+++|++++||.|
T Consensus         4 ~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C   83 (115)
T 2dmi_A            4 GSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKC   83 (115)
T ss_dssp             CCCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBC
T ss_pred             chhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceEC
Confidence            34567788888765 89999999999999999999998  77777655 99999999  899999999999999999999


Q ss_pred             ccchhhhcCHHHHHHHHhhhcC
Q psy6525         298 AMCKKQYASKKMLEKHIRRHEG  319 (360)
Q Consensus       298 ~~C~~~f~~~~~L~~H~~~h~~  319 (360)
                      ++|++.|.+...|..|+++|+.
T Consensus        84 ~~C~k~f~~~~~L~~H~~~hh~  105 (115)
T 2dmi_A           84 MYCGHSFESLQDLSVHMIKTKH  105 (115)
T ss_dssp             SSSCCBCSSHHHHHHHHHHTTT
T ss_pred             CCCCCccCCHHHHHHHHHHhCC
Confidence            9999999999999999999765

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.76  E-value=6.2e-20  Score=131.80  Aligned_cols=83  Identities=14%  Similarity=0.331  Sum_probs=67.6

Q ss_pred             CCcccccccccccCChhHHHHhHhhhcCCCccccccchhhhcCHHHHHHHHhhhcCCcccccccccccCChHHHHHHHHH
Q psy6525         264 LEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEGQDYKCYICGNRYATQKYLEEHIRL  343 (360)
Q Consensus       264 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~  343 (360)
                      ++||.|++|++.|.+...|..|+++|++++||.|+.|++.|.+...|..|+++|++.+|.|+.|++.|.+...|..|++.
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~c~~C~~~f~~~~~L~~H~~~   80 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDKVEELLSKNYHLENEVAR   80 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCCCcchHHHHHHHHHHHhhhHHHHHH
Confidence            46788888888888888888888888888888888888888888888888888877788888888888888888888876


Q ss_pred             hCC
Q psy6525         344 HQG  346 (360)
Q Consensus       344 h~g  346 (360)
                      +++
T Consensus        81 ~h~   83 (88)
T 1llm_C           81 LKK   83 (88)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            554

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.76  E-value=3.4e-19  Score=116.73  Aligned_cols=57  Identities=28%  Similarity=0.636  Sum_probs=33.8

Q ss_pred             CCccccccchhhhcCHHHHHHHHhhhcC-CcccccccccccCChHHHHHHHHHhCCCC
Q psy6525         292 PNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYICGNRYATQKYLEEHIRLHQGHT  348 (360)
Q Consensus       292 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~C~~~f~~~~~l~~H~~~h~g~~  348 (360)
                      |+||.|++||+.|.+.+.|..|+++|++ +||+|++||+.|.+.+.|..|+++|+|+|
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            4556666666666666666666666655 45666666666666666666666666553

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.74  E-value=2.2e-18  Score=125.56  Aligned_cols=84  Identities=29%  Similarity=0.604  Sum_probs=75.8

Q ss_pred             CCcccCCCCCccCCHHHHHHHHHHhcCCCcccccccccccCChhHHHHhHhhhcCC--CccccccchhhhcCHHHHHHHH
Q psy6525         237 ERFKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEP--NKYQCAMCKKQYASKKMLEKHI  314 (360)
Q Consensus       237 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~--~~~~C~~C~~~f~~~~~L~~H~  314 (360)
                      .+|.|..|++.|.+...|..|+++|.++++|.|+.|++.|.+...|..|++.|+++  ++|.|++|++.|.+...|..|+
T Consensus         6 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~H~   85 (95)
T 2yt9_A            6 SGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHI   85 (95)
T ss_dssp             SCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHHHH
T ss_pred             CCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHHHH
Confidence            47899999999999999999999999999999999999999999999999999887  8999999999999999999998


Q ss_pred             h-hhcCC
Q psy6525         315 R-RHEGQ  320 (360)
Q Consensus       315 ~-~h~~~  320 (360)
                      + .|.+.
T Consensus        86 ~~~H~~~   92 (95)
T 2yt9_A           86 KQVHSGP   92 (95)
T ss_dssp             HHTSCCC
T ss_pred             HHhcCCC
Confidence            6 57653

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.74  E-value=2.8e-18  Score=126.20  Aligned_cols=83  Identities=27%  Similarity=0.713  Sum_probs=54.5

Q ss_pred             CCcccccc--cccccCChhHHHHhHhhhcCCCccccc--cchhhhcCHHHHHHHHhhhcC-CcccccccccccCChHHHH
Q psy6525         264 LEVHECNL--CAKLFACKRSLQDHMQRHEEPNKYQCA--MCKKQYASKKMLEKHIRRHEG-QDYKCYICGNRYATQKYLE  338 (360)
Q Consensus       264 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~-~~~~C~~C~~~f~~~~~l~  338 (360)
                      .++|.|.+  |++.|.....|..|+++|.++++|.|+  .|++.|.+...|..|+++|++ ++|+|++|++.|.+...|.
T Consensus        13 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   92 (100)
T 2ebt_A           13 RRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLA   92 (100)
T ss_dssp             CCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHH
T ss_pred             CcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHH
Confidence            34566664  666666666666666666666666664  466666666666666666665 4666666666666666666


Q ss_pred             HHHHHhCC
Q psy6525         339 EHIRLHQG  346 (360)
Q Consensus       339 ~H~~~h~g  346 (360)
                      .|+++|+|
T Consensus        93 ~H~~~H~~  100 (100)
T 2ebt_A           93 LHMKRHQN  100 (100)
T ss_dssp             HHHHHHCC
T ss_pred             HHHHHhCC
Confidence            66666654

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.74  E-value=8.5e-19  Score=114.85  Aligned_cols=58  Identities=21%  Similarity=0.461  Sum_probs=49.1

Q ss_pred             CCcccccccccccCChhHHHHhHhhhcCCCccccccchhhhcCHHHHHHHHhhhcCCc
Q psy6525         264 LEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEGQD  321 (360)
Q Consensus       264 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~  321 (360)
                      |+||.|.+||++|...+.|..|+++|+|++||.|++||++|.+.+.|..|+++|+|+|
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            6788888888888888888888888888888888888888888888888888888765

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.74  E-value=1.3e-18  Score=129.76  Aligned_cols=84  Identities=20%  Similarity=0.340  Sum_probs=50.4

Q ss_pred             CcccCCCCCccCCHHHHHHHHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccchhhhcCHHHHHHHHh-h
Q psy6525         238 RFKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIR-R  316 (360)
Q Consensus       238 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~-~  316 (360)
                      +|.|.+|++.|.....|..|+++|.  ++|.|.+|++.|.....|..|++ |++++||.|++|++.|.+...|..|++ .
T Consensus        16 ~~~C~~C~~~f~~~~~l~~H~~~H~--~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L~~H~~~~   92 (107)
T 1wjp_A           16 VYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSIWRHQVEV   92 (107)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHH--HSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHHHHHHHHT
T ss_pred             CeECCCCCCccCCHHHHHHHHHHCC--CCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHHHHHHHHH
Confidence            5666666666666666666666552  45666666666666666666663 666666666666666666666666665 4


Q ss_pred             hcC-Ccccc
Q psy6525         317 HEG-QDYKC  324 (360)
Q Consensus       317 h~~-~~~~C  324 (360)
                      |.+ ++|.|
T Consensus        93 H~~~~~~~~  101 (107)
T 1wjp_A           93 HNQNNMAPT  101 (107)
T ss_dssp             SCCCCCCCC
T ss_pred             cCCCCCCCC
Confidence            544 34544

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.73  E-value=2.8e-18  Score=123.36  Aligned_cols=80  Identities=26%  Similarity=0.692  Sum_probs=53.6

Q ss_pred             Ccccccc--cccccCChhHHHHhHhhhcCCCccccc--cchhhhcCHHHHHHHHhhhcC-CcccccccccccCChHHHHH
Q psy6525         265 EVHECNL--CAKLFACKRSLQDHMQRHEEPNKYQCA--MCKKQYASKKMLEKHIRRHEG-QDYKCYICGNRYATQKYLEE  339 (360)
Q Consensus       265 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~-~~~~C~~C~~~f~~~~~l~~  339 (360)
                      .+|.|+.  |++.|.+...|..|+++|.++++|.|+  .|++.|.+...|..|+++|++ ++|.|++|++.|.+...|..
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   83 (89)
T 2wbs_A            4 ATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLAL   83 (89)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHH
T ss_pred             CCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHHH
Confidence            4566666  666666666666666666666666665  366666666666666666665 46666667777766666766


Q ss_pred             HHHHh
Q psy6525         340 HIRLH  344 (360)
Q Consensus       340 H~~~h  344 (360)
                      |+++|
T Consensus        84 H~~~H   88 (89)
T 2wbs_A           84 HMKRH   88 (89)
T ss_dssp             HGGGG
T ss_pred             HHHhh
Confidence            66665

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.73  E-value=4.5e-18  Score=127.47  Aligned_cols=82  Identities=29%  Similarity=0.630  Sum_probs=78.6

Q ss_pred             CCcccCCCCCccCCHHHHHHHHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccchhhhcCHHHHHHHHhh
Q psy6525         237 ERFKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRR  316 (360)
Q Consensus       237 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~  316 (360)
                      ++|.| .|++.|.+...|..|++.|.++++|.|++|++.|.+...|..|+++|+++++|.|++|++.|.+...|..|+++
T Consensus         9 k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   87 (110)
T 2csh_A            9 KLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRHVTS   87 (110)
T ss_dssp             CCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHHHHHHH
Confidence            37999 89999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcC
Q psy6525         317 HEG  319 (360)
Q Consensus       317 h~~  319 (360)
                      |++
T Consensus        88 ~~~   90 (110)
T 2csh_A           88 CTK   90 (110)
T ss_dssp             HHH
T ss_pred             ccc
Confidence            864

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.71  E-value=1.6e-17  Score=122.19  Aligned_cols=82  Identities=29%  Similarity=0.630  Sum_probs=76.6

Q ss_pred             CcccCC--CCCccCCHHHHHHHHHHhcCCCccccc--ccccccCChhHHHHhHhhhcCCCccccccchhhhcCHHHHHHH
Q psy6525         238 RFKCDL--CGKVTPYYQHYLRHMRIHQGLEVHECN--LCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKH  313 (360)
Q Consensus       238 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H  313 (360)
                      +|.|.+  |++.|.....|..|++.|.++++|.|+  .|++.|.+...|..|+++|+++++|.|++|++.|.+...|..|
T Consensus        15 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   94 (100)
T 2ebt_A           15 IHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALH   94 (100)
T ss_dssp             CEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHHHH
T ss_pred             ceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHHHH
Confidence            688987  999999999999999999999999996  5999999999999999999999999999999999999999999


Q ss_pred             HhhhcC
Q psy6525         314 IRRHEG  319 (360)
Q Consensus       314 ~~~h~~  319 (360)
                      +++|++
T Consensus        95 ~~~H~~  100 (100)
T 2ebt_A           95 MKRHQN  100 (100)
T ss_dssp             HHHHCC
T ss_pred             HHHhCC
Confidence            999874

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.71  E-value=8e-18  Score=119.75  Aligned_cols=78  Identities=26%  Similarity=0.506  Sum_probs=61.4

Q ss_pred             cccc--cccccccCChhHHHHhHhhhcCCCcccccc--chhhhcCHHHHHHHHhhhcCCcccccc---cccccCChHHHH
Q psy6525         266 VHEC--NLCAKLFACKRSLQDHMQRHEEPNKYQCAM--CKKQYASKKMLEKHIRRHEGQDYKCYI---CGNRYATQKYLE  338 (360)
Q Consensus       266 ~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~C~~---C~~~f~~~~~l~  338 (360)
                      ||.|  +.|++.|.+...|..|+++|.+++||.|++  |++.|.+...|..|+++|++  |.|+.   |++.|.+...|.
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~--~~C~~~~~C~~~f~~~~~l~   78 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG--YPCKKDDSCSFVGKTWTLYL   78 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS--EECCSCSSCCCEESSHHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC--CCCCCCCCCCCccCCHHHHH
Confidence            4677  777777777777888877777777788877  88888888888888877777  77877   888888888888


Q ss_pred             HHHHHhC
Q psy6525         339 EHIRLHQ  345 (360)
Q Consensus       339 ~H~~~h~  345 (360)
                      .|+++|+
T Consensus        79 ~H~~~hh   85 (85)
T 2j7j_A           79 KHVAECH   85 (85)
T ss_dssp             HHHHHCC
T ss_pred             HHHHhcC
Confidence            8887765

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.71  E-value=1e-17  Score=120.41  Aligned_cols=82  Identities=29%  Similarity=0.622  Sum_probs=74.0

Q ss_pred             CCcccCC--CCCccCCHHHHHHHHHHhcCCCccccc--ccccccCChhHHHHhHhhhcCCCccccccchhhhcCHHHHHH
Q psy6525         237 ERFKCDL--CGKVTPYYQHYLRHMRIHQGLEVHECN--LCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEK  312 (360)
Q Consensus       237 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~  312 (360)
                      .+|.|+.  |++.|.+...|..|++.|.++++|.|+  .|++.|.+...|..|+++|+++++|.|+.|++.|.+...|..
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   83 (89)
T 2wbs_A            4 ATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLAL   83 (89)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHH
T ss_pred             CCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHHH
Confidence            3688988  999999999999999999999999997  599999999999999999999999999999999999999999


Q ss_pred             HHhhhc
Q psy6525         313 HIRRHE  318 (360)
Q Consensus       313 H~~~h~  318 (360)
                      |+++|.
T Consensus        84 H~~~H~   89 (89)
T 2wbs_A           84 HMKRHF   89 (89)
T ss_dssp             HGGGGC
T ss_pred             HHHhhC
Confidence            998873

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.69  E-value=5.7e-18  Score=121.46  Aligned_cols=82  Identities=20%  Similarity=0.379  Sum_probs=76.9

Q ss_pred             CCcccCCCCCccCCHHHHHHHHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccchhhhcCHHHHHHHHhh
Q psy6525         237 ERFKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRR  316 (360)
Q Consensus       237 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~  316 (360)
                      ++|.|+.|++.|.+...|..|+++|.++++|.|+.|++.|.....|..|+++|++ .+|.|+.|++.|.+...|..|++.
T Consensus         2 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H~~~   80 (88)
T 1llm_C            2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENEVAR   80 (88)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhHHHHHH
Confidence            4799999999999999999999999999999999999999999999999999985 889999999999999999999997


Q ss_pred             hcC
Q psy6525         317 HEG  319 (360)
Q Consensus       317 h~~  319 (360)
                      +++
T Consensus        81 ~h~   83 (88)
T 1llm_C           81 LKK   83 (88)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            653

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.68  E-value=1.5e-17  Score=118.60  Aligned_cols=78  Identities=19%  Similarity=0.421  Sum_probs=67.9

Q ss_pred             HHHHhHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-----CcccccccccccCChHHHHHHHHHhCCC-CccCCCc
Q psy6525         281 SLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-----QDYKCYICGNRYATQKYLEEHIRLHQGH-TYMCNAK  354 (360)
Q Consensus       281 ~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-----~~~~C~~C~~~f~~~~~l~~H~~~h~g~-~~~C~~c  354 (360)
                      +|.+|+++|++++||.|++|++.|.+...|..|+++|++     ++|+|.+|++.|.+...|..|+++|+|+ ++.|..|
T Consensus         2 s~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~   81 (86)
T 1x6h_A            2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENS   81 (86)
T ss_dssp             TTTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCC
T ss_pred             CcccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCC
Confidence            456788899999999999999999999999999887664     4799999999999999999999999988 8999999


Q ss_pred             cccc
Q psy6525         355 FSFN  358 (360)
Q Consensus       355 ~~~f  358 (360)
                      +.+|
T Consensus        82 ~~~~   85 (86)
T 1x6h_A           82 GPSS   85 (86)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            8775

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.66  E-value=9.4e-17  Score=114.13  Aligned_cols=78  Identities=24%  Similarity=0.405  Sum_probs=72.9

Q ss_pred             Cccc--CCCCCccCCHHHHHHHHHHhcCCCcccccc--cccccCChhHHHHhHhhhcCCCcccccc---chhhhcCHHHH
Q psy6525         238 RFKC--DLCGKVTPYYQHYLRHMRIHQGLEVHECNL--CAKLFACKRSLQDHMQRHEEPNKYQCAM---CKKQYASKKML  310 (360)
Q Consensus       238 ~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~---C~~~f~~~~~L  310 (360)
                      ||.|  +.|++.|.+...|..|+++|.++++|.|+.  |++.|.+...|..|+++|++   |.|+.   |++.|.+...|
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l   77 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLY   77 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHH
Confidence            5789  889999999999999999999999999988  99999999999999999998   99999   99999999999


Q ss_pred             HHHHhhhc
Q psy6525         311 EKHIRRHE  318 (360)
Q Consensus       311 ~~H~~~h~  318 (360)
                      ..|+++|+
T Consensus        78 ~~H~~~hh   85 (85)
T 2j7j_A           78 LKHVAECH   85 (85)
T ss_dssp             HHHHHHCC
T ss_pred             HHHHHhcC
Confidence            99999875

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.64  E-value=1.8e-16  Score=111.11  Aligned_cols=68  Identities=24%  Similarity=0.638  Sum_probs=39.8

Q ss_pred             CCCcccccc--chhhhcCHHHHHHHHh-hhcC-Ccccccc--cccccCChHHHHHHHHHhCCC-CccCCCccccc
Q psy6525         291 EPNKYQCAM--CKKQYASKKMLEKHIR-RHEG-QDYKCYI--CGNRYATQKYLEEHIRLHQGH-TYMCNAKFSFN  358 (360)
Q Consensus       291 ~~~~~~C~~--C~~~f~~~~~L~~H~~-~h~~-~~~~C~~--C~~~f~~~~~l~~H~~~h~g~-~~~C~~c~~~f  358 (360)
                      ++++|.|..  |++.|.+...|..|++ .|.+ ++|+|++  |++.|.+...|..|+++|+|+ ||.|..|+++|
T Consensus         4 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F   78 (79)
T 2dlk_A            4 GSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS   78 (79)
T ss_dssp             CCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCC
T ss_pred             CCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCC
Confidence            445555554  6666666666666655 4544 4566655  666666666666666666655 56666666655

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.63  E-value=1.9e-16  Score=110.95  Aligned_cols=70  Identities=27%  Similarity=0.675  Sum_probs=46.7

Q ss_pred             cCCCcccccc--cccccCChhHHHHhHh-hhcCCCcccccc--chhhhcCHHHHHHHHhhhcC-Cccccccccccc
Q psy6525         262 QGLEVHECNL--CAKLFACKRSLQDHMQ-RHEEPNKYQCAM--CKKQYASKKMLEKHIRRHEG-QDYKCYICGNRY  331 (360)
Q Consensus       262 ~~~~~~~C~~--C~~~f~~~~~l~~H~~-~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~-~~~~C~~C~~~f  331 (360)
                      +++++|.|..  |++.|.+...|..|++ .|.++++|.|++  |++.|.+...|..|+++|++ +||+|++|++.|
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F   78 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS   78 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCC
Confidence            3455666665  6666666666666666 566666667766  77777776677777666665 566777776666

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.62  E-value=3.8e-16  Score=113.44  Aligned_cols=74  Identities=15%  Similarity=0.306  Sum_probs=50.4

Q ss_pred             ccCChhHHHHhHhhhcCCCccccccchhhh-cCHHHHHHHHhhhcC-CcccccccccccCChHHHHHH-HHHhCCCCc
Q psy6525         275 LFACKRSLQDHMQRHEEPNKYQCAMCKKQY-ASKKMLEKHIRRHEG-QDYKCYICGNRYATQKYLEEH-IRLHQGHTY  349 (360)
Q Consensus       275 ~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f-~~~~~L~~H~~~h~~-~~~~C~~C~~~f~~~~~l~~H-~~~h~g~~~  349 (360)
                      .|.....|..|++.|.++++|.|+.|++.| .+...|..|+++| + ++|.|.+|++.|.+...|..| +++|+++||
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p~   91 (96)
T 2ctd_A           15 VYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLPS   91 (96)
T ss_dssp             SSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCSS
T ss_pred             CCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCCCC
Confidence            455566666666666666677777777777 6777777777766 4 567777777777777777777 666766654

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.62  E-value=8.4e-17  Score=114.70  Aligned_cols=78  Identities=23%  Similarity=0.448  Sum_probs=57.8

Q ss_pred             HHHHHHHhcCCCcccccccccccCChhHHHHhHhhhcCC----CccccccchhhhcCHHHHHHHHhhhcC-Ccccccccc
Q psy6525         254 YLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEP----NKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYICG  328 (360)
Q Consensus       254 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~----~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~C~  328 (360)
                      |.+|+++|.++++|.|.+|++.|.....|..|++.|++.    ++|.|++|++.|.+...|..|+++|++ +++.|..|+
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~   82 (86)
T 1x6h_A            3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSG   82 (86)
T ss_dssp             TTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCCC
T ss_pred             cccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCCC
Confidence            345667777777777777777777777777777766654    677788888888777778888777776 577777777


Q ss_pred             ccc
Q psy6525         329 NRY  331 (360)
Q Consensus       329 ~~f  331 (360)
                      ..|
T Consensus        83 ~~~   85 (86)
T 1x6h_A           83 PSS   85 (86)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            654

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.61  E-value=9.3e-17  Score=123.88  Aligned_cols=82  Identities=15%  Similarity=0.306  Sum_probs=70.9

Q ss_pred             CCcccccccccccC------ChhHHHHhHhhhcCCCccccccchhhhcCHHHHHHHHhhhcCCcccccccccccCChHHH
Q psy6525         264 LEVHECNLCAKLFA------CKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEGQDYKCYICGNRYATQKYL  337 (360)
Q Consensus       264 ~~~~~C~~C~~~f~------~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~C~~C~~~f~~~~~l  337 (360)
                      .+++.|++|+..|.      ....|..|+ .|++++||.|++|++.|.+...|..|+++| .+||.|++|++.|.+.+.|
T Consensus        39 ~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H-~~~~~C~~C~k~f~~~~~l  116 (129)
T 2wbt_A           39 QKRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPLCLMPFSSSVSLKQHIRYT-EHTKVCPVCKKEFTSTDSA  116 (129)
T ss_dssp             HHHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTTTCCEESSHHHHHHHHHHT-CCCCBCTTTCCBCSSHHHH
T ss_pred             hCcccchhhhcccCCCcccCCHHHHHHHH-HhCCCCCeECCCCCcccCCHhHHHHHHHHC-CCCCCCCCCCcccCCHHHH
Confidence            35577887776665      556666666 688899999999999999999999999999 8899999999999999999


Q ss_pred             HHHHHHhCCC
Q psy6525         338 EEHIRLHQGH  347 (360)
Q Consensus       338 ~~H~~~h~g~  347 (360)
                      ..|+++|+|.
T Consensus       117 ~~H~~~h~~~  126 (129)
T 2wbt_A          117 LDHVCKKHNI  126 (129)
T ss_dssp             HHHHHHTTCC
T ss_pred             HHHHHHHCCc
Confidence            9999999986

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.60  E-value=8.1e-16  Score=111.65  Aligned_cols=77  Identities=17%  Similarity=0.193  Sum_probs=69.1

Q ss_pred             CCccCCHHHHHHHHHHhcCCCccccccccccc-CChhHHHHhHhhhcCCCccccccchhhhcCHHHHHHH-HhhhcCCcc
Q psy6525         245 GKVTPYYQHYLRHMRIHQGLEVHECNLCAKLF-ACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKH-IRRHEGQDY  322 (360)
Q Consensus       245 ~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f-~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H-~~~h~~~~~  322 (360)
                      ...|.....|..|++.|.++++|.|+.|++.| .+...|..|+++| +++||.|.+|++.|.+...|..| +++|+++||
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p~   91 (96)
T 2ctd_A           13 PPVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLPS   91 (96)
T ss_dssp             CCSSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCSS
T ss_pred             CCCCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCCCC
Confidence            34667778888999999999999999999999 9999999999999 99999999999999999999999 888988765

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=8.6e-16  Score=106.98  Aligned_cols=64  Identities=33%  Similarity=0.678  Sum_probs=46.8

Q ss_pred             hhcCCCccccccchhhhcCHHHHHHHHhhhcC-CcccccccccccCChHHHHHHHHHhCCC-CccC
Q psy6525         288 RHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYICGNRYATQKYLEEHIRLHQGH-TYMC  351 (360)
Q Consensus       288 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~C~~~f~~~~~l~~H~~~h~g~-~~~C  351 (360)
                      .+.++++|.|++|++.|.+...|..|+++|++ ++|+|++|++.|.+...|..|+++|+|+ ||.|
T Consensus        12 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           12 QQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             cCCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            45566777777777777777777777777766 5777777777777777777777777776 6766

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.59  E-value=3.2e-16  Score=114.56  Aligned_cols=73  Identities=15%  Similarity=0.223  Sum_probs=58.7

Q ss_pred             ccCChhHHHHhHhhhcCCCccccccchhhhc-CHHHHHHHHhhhcC--CcccccccccccCChHHHHHHHHHhCCC
Q psy6525         275 LFACKRSLQDHMQRHEEPNKYQCAMCKKQYA-SKKMLEKHIRRHEG--QDYKCYICGNRYATQKYLEEHIRLHQGH  347 (360)
Q Consensus       275 ~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~-~~~~L~~H~~~h~~--~~~~C~~C~~~f~~~~~l~~H~~~h~g~  347 (360)
                      .+.....+..|+++|.++++|.|++|++.|. +...|..|+++|++  ++|+|.+|++.|.+...|..|+++|+|+
T Consensus         5 s~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~   80 (98)
T 2gqj_A            5 SSGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSA   80 (98)
T ss_dssp             CCCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCS
T ss_pred             CCCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCC
Confidence            4555566777888888888888888888888 88888888888775  5788888888888888888888888876

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.58  E-value=7.2e-16  Score=105.87  Aligned_cols=63  Identities=30%  Similarity=0.648  Sum_probs=46.2

Q ss_pred             HhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-CcccccccccccCChHHHHHHHHHhCCCC
Q psy6525         286 MQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYICGNRYATQKYLEEHIRLHQGHT  348 (360)
Q Consensus       286 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~C~~~f~~~~~l~~H~~~h~g~~  348 (360)
                      .++|.+++||.|++|++.|.+...|..|+++|++ +||+|++|++.|.+...|..|+++|+|+|
T Consensus         6 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            6 SGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             CCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             CcccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            3466777777777777777777777777777766 57777777777777777777777777664

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.57  E-value=1.9e-15  Score=105.19  Aligned_cols=63  Identities=25%  Similarity=0.497  Sum_probs=40.4

Q ss_pred             cCCCcccccccccccCChhHHHHhHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Ccccc
Q psy6525         262 QGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKC  324 (360)
Q Consensus       262 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C  324 (360)
                      .++++|.|++|++.|.....|..|+++|++++||.|++|++.|.+...|..|+++|++ +||+|
T Consensus        14 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           14 RERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            4455666666666666666666666666666666666666666666666666666665 45655

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.56  E-value=3.1e-15  Score=103.23  Aligned_cols=59  Identities=31%  Similarity=0.738  Sum_probs=39.7

Q ss_pred             hcCCCccccccchhhhcCHHHHHHHHhhhcC-CcccccccccccCChHHHHHHHHHhCCC
Q psy6525         289 HEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYICGNRYATQKYLEEHIRLHQGH  347 (360)
Q Consensus       289 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~C~~~f~~~~~l~~H~~~h~g~  347 (360)
                      +.++++|.|+.|++.|.+...|..|+++|++ ++|+|.+|++.|.+...|..|+++|+|+
T Consensus        12 ~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~   71 (74)
T 2lce_A           12 THSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGE   71 (74)
T ss_dssp             CCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCS
T ss_pred             cCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCC
Confidence            4456666666666666666666666666665 4667777777777777777777776665

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.55  E-value=5.9e-16  Score=113.18  Aligned_cols=75  Identities=19%  Similarity=0.251  Sum_probs=60.7

Q ss_pred             cCCHHHHHHHHHHhcCCCcccccccccccC-ChhHHHHhHhhhcC-CCccccccchhhhcCHHHHHHHHhhhcC-Ccc
Q psy6525         248 TPYYQHYLRHMRIHQGLEVHECNLCAKLFA-CKRSLQDHMQRHEE-PNKYQCAMCKKQYASKKMLEKHIRRHEG-QDY  322 (360)
Q Consensus       248 f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~-~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~  322 (360)
                      +.....+..|+++|.++++|.|.+|++.|. ....|..|+++|++ +++|.|++|++.|.+...|..|+++|++ +|+
T Consensus         6 ~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~   83 (98)
T 2gqj_A            6 SGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPS   83 (98)
T ss_dssp             CCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSS
T ss_pred             CCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCC
Confidence            444455677888888888888888888888 88888888888888 8888888888888888888888888877 443

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.55  E-value=1.8e-15  Score=110.39  Aligned_cols=63  Identities=24%  Similarity=0.461  Sum_probs=32.7

Q ss_pred             CCCccccccchhhhcCHHHHHHHHhh-h---cC-CcccccccccccCChHHHHHH-HHHhCCC-CccCCC
Q psy6525         291 EPNKYQCAMCKKQYASKKMLEKHIRR-H---EG-QDYKCYICGNRYATQKYLEEH-IRLHQGH-TYMCNA  353 (360)
Q Consensus       291 ~~~~~~C~~C~~~f~~~~~L~~H~~~-h---~~-~~~~C~~C~~~f~~~~~l~~H-~~~h~g~-~~~C~~  353 (360)
                      |++||.|+.|++.|.+.+.|..|+++ |   .+ +||+|.+||+.|...+.|..| +++|+|+ ||.|.+
T Consensus        15 gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~   84 (102)
T 2ghf_A           15 VEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTM   84 (102)
T ss_dssp             CCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEE
T ss_pred             CCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCc
Confidence            44555555555555555555555542 4   22 355555555555555555555 4555554 555544

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=1.2e-15  Score=106.32  Aligned_cols=66  Identities=20%  Similarity=0.471  Sum_probs=56.7

Q ss_pred             HHHhHhhhcCCCccccccchhhhcCHHHHHHHHh-hhcC--CcccccccccccCChHHHHHHHHHhCCC
Q psy6525         282 LQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIR-RHEG--QDYKCYICGNRYATQKYLEEHIRLHQGH  347 (360)
Q Consensus       282 l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~-~h~~--~~~~C~~C~~~f~~~~~l~~H~~~h~g~  347 (360)
                      |.+|+++|++++||.|++|++.|.+...|..|++ .|.+  ++|+|++|++.|.+...|..|+++|++.
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~   71 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSY   71 (77)
T ss_dssp             CCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCC
T ss_pred             CCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCC
Confidence            4578888999999999999999999999999987 5665  5899999999999999999999987765

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=2.6e-15  Score=109.57  Aligned_cols=65  Identities=20%  Similarity=0.346  Sum_probs=37.1

Q ss_pred             CCCcccccccccccCChhHHHHhHh-hh---cCCCccccccchhhhcCHHHHHHH-HhhhcC-Cccccccc
Q psy6525         263 GLEVHECNLCAKLFACKRSLQDHMQ-RH---EEPNKYQCAMCKKQYASKKMLEKH-IRRHEG-QDYKCYIC  327 (360)
Q Consensus       263 ~~~~~~C~~C~~~f~~~~~l~~H~~-~h---~~~~~~~C~~C~~~f~~~~~L~~H-~~~h~~-~~~~C~~C  327 (360)
                      |++||.|+.|++.|..+..|..|++ .|   .+++||.|++||+.|.+.+.|..| +++|++ +||+|.++
T Consensus        15 gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~   85 (102)
T 2ghf_A           15 VEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMV   85 (102)
T ss_dssp             CCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEEC
T ss_pred             CCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCcc
Confidence            4555566666666666666666655 35   345556666666666666666666 455555 45665554

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=2.9e-15  Score=102.80  Aligned_cols=63  Identities=29%  Similarity=0.501  Sum_probs=56.9

Q ss_pred             HHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccchhhhcCHHHHHHHHhhhcCCc
Q psy6525         259 RIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEGQD  321 (360)
Q Consensus       259 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~  321 (360)
                      ++|.++++|.|++|++.|.....|..|+++|.+++||.|++|++.|.+...|..|+++|+++|
T Consensus         7 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            7 GIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             CTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             cccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            467888999999999999999999999999999999999999999999999999999998754

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.53  E-value=6.3e-15  Score=100.50  Aligned_cols=59  Identities=24%  Similarity=0.439  Sum_probs=39.7

Q ss_pred             hcCCCccccccchhhhcCHHHHHHHHhhhcC-CcccccccccccCChHHHHHHHHHhCCC
Q psy6525         289 HEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYICGNRYATQKYLEEHIRLHQGH  347 (360)
Q Consensus       289 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~C~~~f~~~~~l~~H~~~h~g~  347 (360)
                      |.++++|.|++|++.|.+...|..|+++|++ ++|+|.+|++.|.+...|..|+++|+|+
T Consensus         4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~   63 (70)
T 1x5w_A            4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGD   63 (70)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSS
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCC
Confidence            4556666666666666666666666666665 4666777777777766777777666665

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.52  E-value=6.6e-16  Score=119.06  Aligned_cols=70  Identities=20%  Similarity=0.403  Sum_probs=59.5

Q ss_pred             cCCHHHHHHHHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccchhhhcCHHHHHHHHhhhcCC
Q psy6525         248 TPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEGQ  320 (360)
Q Consensus       248 f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~  320 (360)
                      |.....|..|+ .|++++||.|++|++.|.....|..|+++|  ++||.|++|++.|.+...|..|+++|++.
T Consensus        57 ~~~~~~l~~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           57 LDESSYLYRLL-ASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             TTTHHHHHHHH-HHHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             cCCHHHHHHHH-HhCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            34666777776 588888999999999999999999999988  78899999999999999999999988874

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.52  E-value=9.9e-15  Score=100.69  Aligned_cols=59  Identities=27%  Similarity=0.563  Sum_probs=38.3

Q ss_pred             hcCCCcccccccccccCChhHHHHhHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC
Q psy6525         261 HQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG  319 (360)
Q Consensus       261 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  319 (360)
                      +.++++|.|..|++.|.+...|..|+++|+++++|.|++|++.|.+...|..|+++|++
T Consensus        12 ~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~   70 (74)
T 2lce_A           12 THSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSG   70 (74)
T ss_dssp             CCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCC
T ss_pred             cCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCC
Confidence            34556666666666666666666666666666666666666666666666666666665

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.52  E-value=6.8e-15  Score=95.91  Aligned_cols=54  Identities=31%  Similarity=0.646  Sum_probs=27.9

Q ss_pred             CCccccccchhhhcCHHHHHHHHhhhcC-CcccccccccccCChHHHHHHHHHhC
Q psy6525         292 PNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYICGNRYATQKYLEEHIRLHQ  345 (360)
Q Consensus       292 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~C~~~f~~~~~l~~H~~~h~  345 (360)
                      ++||.|++|++.|.+...|..|+++|++ +||.|++|++.|.+...|..|+++|+
T Consensus         2 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            2 SSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             ---CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            3455555555555555555555555544 35555555555555555555555554

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.51  E-value=5.9e-15  Score=99.38  Aligned_cols=60  Identities=18%  Similarity=0.533  Sum_probs=43.9

Q ss_pred             hhhcCCCccccccchhhhcCHHHHHHHHhh-h-cC-CcccccccccccCChHHHHHHHHHhCC
Q psy6525         287 QRHEEPNKYQCAMCKKQYASKKMLEKHIRR-H-EG-QDYKCYICGNRYATQKYLEEHIRLHQG  346 (360)
Q Consensus       287 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~-h-~~-~~~~C~~C~~~f~~~~~l~~H~~~h~g  346 (360)
                      ++|.+++||.|+.|++.|.+...|..|+++ | .+ +||+|++|++.|.+.+.|..|+++|+|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            456677777777777777777777777776 5 23 577777777777777777777777776

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.51  E-value=9.9e-15  Score=95.11  Aligned_cols=57  Identities=32%  Similarity=0.664  Sum_probs=43.3

Q ss_pred             CCCcccccccccccCChhHHHHhHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC
Q psy6525         263 GLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG  319 (360)
Q Consensus       263 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  319 (360)
                      |+++|.|++|++.|.+...|..|+++|++++||.|++|++.|.+...|..|+++|++
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            356788888888888888888888888888888888888888888888888887763

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.49  E-value=1e-14  Score=102.66  Aligned_cols=60  Identities=25%  Similarity=0.478  Sum_probs=37.0

Q ss_pred             hhcCCCccccccchhhhcCHHHHHHHHhhhcC-CcccccccccccCChHHHHHHHH-HhCCC
Q psy6525         288 RHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYICGNRYATQKYLEEHIR-LHQGH  347 (360)
Q Consensus       288 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~C~~~f~~~~~l~~H~~-~h~g~  347 (360)
                      .+.+.++|.|++|++.|.+...|..|+++|++ +||.|++|++.|.+...|..|++ +|.++
T Consensus        22 ~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E   83 (85)
T 2lv2_A           22 LSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSE   83 (85)
T ss_dssp             SCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTC
T ss_pred             CCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCC
Confidence            34455566666666666666666666666665 46666666666666666666653 45543

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.48  E-value=8e-17  Score=110.98  Aligned_cols=71  Identities=14%  Similarity=0.209  Sum_probs=59.1

Q ss_pred             ChhHHHHhHhhhcCCCccccccchhhhcCHHHHHHHHhhhcCCcccccccccccCChHHHHHHHHHhCCC-CccCCCc
Q psy6525         278 CKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEGQDYKCYICGNRYATQKYLEEHIRLHQGH-TYMCNAK  354 (360)
Q Consensus       278 ~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~g~-~~~C~~c  354 (360)
                      +...|..|+++|.+++||.|++|++.|.+...|..      .++|.|++|++.|.+...|..|+++|+|+ ||.|..|
T Consensus         2 ~~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A            2 SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CCCSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             cchhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            34567788888888888888888888888877765      67888999999999888899998888887 8888877

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.48  E-value=1e-14  Score=98.15  Aligned_cols=61  Identities=18%  Similarity=0.509  Sum_probs=53.8

Q ss_pred             HHhcCCCcccccccccccCChhHHHHhHhh-h-cCCCccccccchhhhcCHHHHHHHHhhhcC
Q psy6525         259 RIHQGLEVHECNLCAKLFACKRSLQDHMQR-H-EEPNKYQCAMCKKQYASKKMLEKHIRRHEG  319 (360)
Q Consensus       259 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h-~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  319 (360)
                      ++|.++++|.|+.|++.|.+...|..|+++ | .+++||.|+.|++.|.+.+.|..|+++|++
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            357888999999999999999999999988 6 588999999999999999999999998875

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.48  E-value=2.5e-14  Score=97.49  Aligned_cols=59  Identities=20%  Similarity=0.419  Sum_probs=50.3

Q ss_pred             hcCCCcccccccccccCChhHHHHhHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC
Q psy6525         261 HQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG  319 (360)
Q Consensus       261 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  319 (360)
                      |.++++|.|.+|++.|.+...|..|+++|+++++|.|++|++.|.+...|..|+++|++
T Consensus         4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~   62 (70)
T 1x5w_A            4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG   62 (70)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhC
Confidence            56778888888888888888888888888888888888888888888888888888876

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.46  E-value=3e-14  Score=100.23  Aligned_cols=59  Identities=25%  Similarity=0.541  Sum_probs=43.7

Q ss_pred             hcCCCcccccccccccCChhHHHHhHhhhcCCCccccccchhhhcCHHHHHHHHh-hhcC
Q psy6525         261 HQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIR-RHEG  319 (360)
Q Consensus       261 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~-~h~~  319 (360)
                      +.+.++|.|++|++.|.++..|..|+++|++++||.|++|++.|.+...|..|++ .|.+
T Consensus        23 ~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~   82 (85)
T 2lv2_A           23 SASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPS   82 (85)
T ss_dssp             CCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTT
T ss_pred             CCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcC
Confidence            4455667777777777777777777777777777777777777777777777764 4544

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.46  E-value=5.7e-15  Score=102.77  Aligned_cols=65  Identities=28%  Similarity=0.538  Sum_probs=54.2

Q ss_pred             HHHHHHhcCCCcccccccccccCChhHHHHhHh-hhcCC-CccccccchhhhcCHHHHHHHHhhhcC
Q psy6525         255 LRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQ-RHEEP-NKYQCAMCKKQYASKKMLEKHIRRHEG  319 (360)
Q Consensus       255 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~  319 (360)
                      .+|+++|.++++|.|++|++.|.....|..|++ .|.++ ++|.|++|++.|.+...|..|+++|++
T Consensus         4 ~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~   70 (77)
T 2ct1_A            4 GSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHS   70 (77)
T ss_dssp             CCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             CccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCC
Confidence            457778888888999999999999899999987 56664 789999999999999999999888665

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.46  E-value=4.5e-14  Score=91.94  Aligned_cols=53  Identities=32%  Similarity=0.673  Sum_probs=27.2

Q ss_pred             ccccccchhhhcCHHHHHHHHhhhcC-CcccccccccccCChHHHHHHHHHhCC
Q psy6525         294 KYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYICGNRYATQKYLEEHIRLHQG  346 (360)
Q Consensus       294 ~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~C~~~f~~~~~l~~H~~~h~g  346 (360)
                      ||.|+.|++.|.+...|..|+++|++ ++|.|++|++.|.+...|..|+++|+|
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   54 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH   54 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSS
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcc
Confidence            34455555555555555555555444 345555555555555555555555544

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.41  E-value=1.2e-13  Score=90.92  Aligned_cols=53  Identities=26%  Similarity=0.793  Sum_probs=26.1

Q ss_pred             ccccccchhhhcCHHHHHHHHhhhcC-CcccccccccccCChHHHHHHH-HHhCC
Q psy6525         294 KYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYICGNRYATQKYLEEHI-RLHQG  346 (360)
Q Consensus       294 ~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~C~~~f~~~~~l~~H~-~~h~g  346 (360)
                      ||.|+.|++.|.+...|..|+++|++ ++|.|++|++.|.+...|..|+ ++|.|
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~   56 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG   56 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             cCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCC
Confidence            44455555555555555555554444 3455555555555555555553 34443

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.41  E-value=1.3e-13  Score=96.04  Aligned_cols=59  Identities=24%  Similarity=0.510  Sum_probs=40.7

Q ss_pred             hcCCCccccccchhhhcCHHHHHHHHhhhc----CCcccccccccccCChHHHHHHHHH-hCCC
Q psy6525         289 HEEPNKYQCAMCKKQYASKKMLEKHIRRHE----GQDYKCYICGNRYATQKYLEEHIRL-HQGH  347 (360)
Q Consensus       289 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~----~~~~~C~~C~~~f~~~~~l~~H~~~-h~g~  347 (360)
                      |++++||.|++|++.|.+...|..|+++|+    .++|.|.+|++.|.+...|..|++. |.+.
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~   65 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPAL   65 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTT
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCC
Confidence            566777777777777777777777777766    2577777777777777777777743 4443

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.41  E-value=2.7e-13  Score=88.20  Aligned_cols=54  Identities=22%  Similarity=0.503  Sum_probs=30.6

Q ss_pred             cccccccccccCChhHHHHhHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC
Q psy6525         266 VHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG  319 (360)
Q Consensus       266 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  319 (360)
                      ||.|+.|++.|.+...|..|+++|++++||.|++|++.|.+...|..|+++|++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   54 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH   54 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSS
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcc
Confidence            355555555555555555555555555555555555555555555555555544

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.40  E-value=8.8e-14  Score=95.56  Aligned_cols=64  Identities=27%  Similarity=0.672  Sum_probs=41.8

Q ss_pred             HHHhHh-hhcCCCccccc--cchhhhcCHHHHHHHHhhhcC-CcccccccccccCChHHHHHHHHHhC
Q psy6525         282 LQDHMQ-RHEEPNKYQCA--MCKKQYASKKMLEKHIRRHEG-QDYKCYICGNRYATQKYLEEHIRLHQ  345 (360)
Q Consensus       282 l~~H~~-~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~-~~~~C~~C~~~f~~~~~l~~H~~~h~  345 (360)
                      |..|+. +|.++++|.|+  .|++.|.+...|..|+++|++ ++|+|++|++.|.+...|..|+++|+
T Consensus         6 ~~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G            6 MNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             --CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             ccchhhccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            334443 35666777775  477777777777777777665 56777777777777777777776664

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.39  E-value=2.1e-13  Score=89.69  Aligned_cols=55  Identities=25%  Similarity=0.751  Sum_probs=41.2

Q ss_pred             CcccccccccccCChhHHHHhHhhhcCCCccccccchhhhcCHHHHHHHH-hhhcC
Q psy6525         265 EVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHI-RRHEG  319 (360)
Q Consensus       265 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~-~~h~~  319 (360)
                      +||.|+.|++.|.+...|..|+++|++++||.|++|++.|.+...|..|+ +.|.+
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~   56 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG   56 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCC
Confidence            36777777777777777777777777777777777777777777777776 45655

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.37  E-value=2.1e-13  Score=94.95  Aligned_cols=58  Identities=22%  Similarity=0.504  Sum_probs=48.7

Q ss_pred             hcCCCcccccccccccCChhHHHHhHhhhcC---CCccccccchhhhcCHHHHHHHHhhhc
Q psy6525         261 HQGLEVHECNLCAKLFACKRSLQDHMQRHEE---PNKYQCAMCKKQYASKKMLEKHIRRHE  318 (360)
Q Consensus       261 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~~~L~~H~~~h~  318 (360)
                      |+++++|.|.+|++.|.....|..|+++|++   +++|.|++|++.|.+...|..|++.++
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H   62 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSH   62 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTS
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhC
Confidence            6788888888888888888888888888885   788888888888888888888886543

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.37  E-value=4.1e-16  Score=107.37  Aligned_cols=67  Identities=19%  Similarity=0.357  Sum_probs=41.9

Q ss_pred             HHHHHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Cccccccc
Q psy6525         254 YLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYIC  327 (360)
Q Consensus       254 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~C  327 (360)
                      |..|+++|.++++|.|++|++.|.+...|..       +++|.|+.|++.|.+...|..|+++|++ +||+|++|
T Consensus         6 l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A            6 SGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CCCCCCCCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             HHHHHHHhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            4455556666666666666666666655554       5566666666666666666666666665 46666665

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.35  E-value=4.4e-13  Score=91.98  Aligned_cols=59  Identities=24%  Similarity=0.599  Sum_probs=49.2

Q ss_pred             HhcCCCccccc--ccccccCChhHHHHhHhhhcCCCccccccchhhhcCHHHHHHHHhhhc
Q psy6525         260 IHQGLEVHECN--LCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHE  318 (360)
Q Consensus       260 ~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  318 (360)
                      +|.++++|.|+  .|++.|.+...|..|+++|.++++|.|++|++.|.+...|..|+++|+
T Consensus        13 ~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           13 VVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             cCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            45677888886  488888888888888888888888888888888888888888888774

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.33  E-value=1.7e-12  Score=94.03  Aligned_cols=60  Identities=20%  Similarity=0.304  Sum_probs=37.3

Q ss_pred             cccCCCCCccCCHHHHHHHHHH-hcCCCc--------ccccccccccCChhHHHHhHhhhcCCCccccc
Q psy6525         239 FKCDLCGKVTPYYQHYLRHMRI-HQGLEV--------HECNLCAKLFACKRSLQDHMQRHEEPNKYQCA  298 (360)
Q Consensus       239 ~~C~~C~~~f~~~~~l~~H~~~-h~~~~~--------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  298 (360)
                      +.|..|++.|.....|..|+++ |.++++        |.|+.|++.|.+...|..|+++|++++||.|+
T Consensus        26 ~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           26 RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            4566666666666666666665 555555        56666666666666666666666666666654

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.29  E-value=2.7e-12  Score=92.86  Aligned_cols=58  Identities=22%  Similarity=0.430  Sum_probs=35.8

Q ss_pred             cccccchhhhcCHHHHHHHHhh-hcCC-c--------ccccccccccCChHHHHHHHHHhCCC-CccCC
Q psy6525         295 YQCAMCKKQYASKKMLEKHIRR-HEGQ-D--------YKCYICGNRYATQKYLEEHIRLHQGH-TYMCN  352 (360)
Q Consensus       295 ~~C~~C~~~f~~~~~L~~H~~~-h~~~-~--------~~C~~C~~~f~~~~~l~~H~~~h~g~-~~~C~  352 (360)
                      |.|+.|++.|.+...|..|+++ |.++ +        |.|++|++.|.+...|..|+++|+|+ ||.|.
T Consensus        26 ~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           26 RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            4455555555555555555544 4432 2        67777777777777777777777776 77774

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=3.6e-12  Score=85.49  Aligned_cols=54  Identities=17%  Similarity=0.343  Sum_probs=31.5

Q ss_pred             CCCccccccchhhhcCHHHHHHHHhhhcC-Cccccc-ccccccCChHHHHHHHHHhCC
Q psy6525         291 EPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCY-ICGNRYATQKYLEEHIRLHQG  346 (360)
Q Consensus       291 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~-~C~~~f~~~~~l~~H~~~h~g  346 (360)
                      +++||.|+.|++.|. ...|..|+++ ++ +||+|+ .||+.|...+.|..|+++|..
T Consensus         7 ~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~   62 (66)
T 2eod_A            7 GKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCN   62 (66)
T ss_dssp             CCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSS
T ss_pred             CCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcc
Confidence            445566666666666 5566666555 43 456666 666666666666666665543

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=3e-12  Score=85.91  Aligned_cols=55  Identities=20%  Similarity=0.402  Sum_probs=37.5

Q ss_pred             CCCcccccccccccCChhHHHHhHhhhcCCCccccc-cchhhhcCHHHHHHHHhhhcC
Q psy6525         263 GLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCA-MCKKQYASKKMLEKHIRRHEG  319 (360)
Q Consensus       263 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~-~C~~~f~~~~~L~~H~~~h~~  319 (360)
                      +.++|.|..|++.|. ...|..|+++ ++++||.|+ .|++.|...+.|..|+++|.+
T Consensus         7 ~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~   62 (66)
T 2eod_A            7 GKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCN   62 (66)
T ss_dssp             CCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSS
T ss_pred             CCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcc
Confidence            456667777777777 6677777666 666777777 677777777777777766644

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.21  E-value=1.9e-12  Score=80.06  Aligned_cols=43  Identities=21%  Similarity=0.328  Sum_probs=20.9

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Cccccccc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYIC  327 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~C  327 (360)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++ +||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44444444455555555555555555555544444 34444444

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.21  E-value=3.6e-12  Score=78.78  Aligned_cols=44  Identities=20%  Similarity=0.232  Sum_probs=26.6

Q ss_pred             HHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccc
Q psy6525         257 HMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMC  300 (360)
Q Consensus       257 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  300 (360)
                      |+++|+++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44455566666666666666666666666666666666666555

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.20  E-value=3.9e-12  Score=78.58  Aligned_cols=43  Identities=14%  Similarity=0.190  Sum_probs=18.8

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Cccccccc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYIC  327 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~C  327 (360)
                      |+++|++++||.|++|++.|.+...|..|+++|++ +||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            34444444444444444444444444444444443 34444443

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=3.9e-12  Score=78.61  Aligned_cols=41  Identities=20%  Similarity=0.329  Sum_probs=16.8

Q ss_pred             HhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Ccccccc
Q psy6525         286 MQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYI  326 (360)
Q Consensus       286 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~  326 (360)
                      +++|++++||.|++|++.|.+...|..|+++|++ +||+|++
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytn_A            4 GSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCC
T ss_pred             CcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCC
Confidence            3334444444444444444444444444444433 2344433

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4.2e-12  Score=78.46  Aligned_cols=43  Identities=23%  Similarity=0.309  Sum_probs=18.0

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Cccccccc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYIC  327 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~C  327 (360)
                      |+++|++++||.|++|++.|.+...|..|+++|++ +||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            33344444444444444444444444444444433 34444433

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4.4e-12  Score=78.36  Aligned_cols=42  Identities=21%  Similarity=0.334  Sum_probs=17.4

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Ccccccc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYI  326 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~  326 (360)
                      |+++|++++||.|++|++.|.+...|..|+++|++ +||+|++
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eov_A            3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSS   45 (46)
T ss_dssp             CCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCC
T ss_pred             CCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            33344444444444444444444444444444433 2344443

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=3.8e-12  Score=78.66  Aligned_cols=42  Identities=19%  Similarity=0.248  Sum_probs=17.3

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Ccccccc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYI  326 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~  326 (360)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++ +||+|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emm_A            3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSC
T ss_pred             CcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            33344444444444444444444444444444433 2344443

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=3e-12  Score=79.15  Aligned_cols=44  Identities=20%  Similarity=0.243  Sum_probs=40.6

Q ss_pred             HHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccc
Q psy6525         257 HMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMC  300 (360)
Q Consensus       257 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  300 (360)
                      |+++|.++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            66778899999999999999999999999999999999999987

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=4e-12  Score=78.54  Aligned_cols=41  Identities=22%  Similarity=0.365  Sum_probs=16.5

Q ss_pred             HhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Ccccccc
Q psy6525         286 MQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYI  326 (360)
Q Consensus       286 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~  326 (360)
                      +++|++++||.|++|++.|.+...|..|+++|++ +||+|++
T Consensus         4 ~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoe_A            4 GSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSS   45 (46)
T ss_dssp             SSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCC
T ss_pred             CCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            3334444444444444444444444444444333 2344433

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=3.7e-12  Score=78.70  Aligned_cols=42  Identities=21%  Similarity=0.416  Sum_probs=17.6

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Ccccccc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYI  326 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~  326 (360)
                      |+++|++++||.|++|++.|.+...|..|+++|++ +||+|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eml_A            3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSC
T ss_pred             ccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCC
Confidence            33344444444444444444444444444444433 2444443

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=2.5e-12  Score=78.66  Aligned_cols=41  Identities=27%  Similarity=0.322  Sum_probs=19.2

Q ss_pred             HhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccc
Q psy6525         260 IHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMC  300 (360)
Q Consensus       260 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  300 (360)
                      +|.++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         4 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            4 GSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34444444444444444444444444444444444444443

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.19  E-value=3e-12  Score=79.11  Aligned_cols=44  Identities=18%  Similarity=0.201  Sum_probs=23.7

Q ss_pred             HHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccc
Q psy6525         257 HMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMC  300 (360)
Q Consensus       257 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  300 (360)
                      |+++|.++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            33445555555555555555555555555555555555555554

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=3.6e-12  Score=78.77  Aligned_cols=43  Identities=19%  Similarity=0.225  Sum_probs=18.8

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Cccccccc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYIC  327 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~C  327 (360)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++ +||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             cccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            33444444444444444444444444444444443 34444443

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=4.6e-12  Score=77.45  Aligned_cols=43  Identities=19%  Similarity=0.291  Sum_probs=26.3

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Cccccccc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYIC  327 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~C  327 (360)
                      |+++|++++||.|++|++.|.+...|..|+++|++ +||+|++|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45556666666666666666666666666666655 45666655

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=3.1e-12  Score=79.05  Aligned_cols=44  Identities=18%  Similarity=0.219  Sum_probs=39.3

Q ss_pred             HHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccc
Q psy6525         257 HMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMC  300 (360)
Q Consensus       257 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  300 (360)
                      |+++|+++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            66778889999999999999999999999999999999999887

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=3.1e-12  Score=79.03  Aligned_cols=45  Identities=20%  Similarity=0.263  Sum_probs=41.1

Q ss_pred             HHHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccc
Q psy6525         256 RHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMC  300 (360)
Q Consensus       256 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  300 (360)
                      +|+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            366788999999999999999999999999999999999999987

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=3e-12  Score=79.13  Aligned_cols=44  Identities=23%  Similarity=0.265  Sum_probs=39.2

Q ss_pred             HHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccc
Q psy6525         257 HMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMC  300 (360)
Q Consensus       257 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  300 (360)
                      |+++|+++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            66778888999999999999999999999999999999999887

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.19  E-value=3.7e-12  Score=78.68  Aligned_cols=43  Identities=23%  Similarity=0.321  Sum_probs=18.4

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Cccccccc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYIC  327 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~C  327 (360)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++ +||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             cccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            33444444444444444444444444444444443 34444433

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=4.9e-12  Score=78.14  Aligned_cols=43  Identities=19%  Similarity=0.319  Sum_probs=19.1

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Cccccccc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYIC  327 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~C  327 (360)
                      |+++|++++||.|++|++.|.+...|..|+++|++ +||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34444444444444444444444444444444443 34444443

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=3.9e-12  Score=78.60  Aligned_cols=42  Identities=26%  Similarity=0.382  Sum_probs=17.2

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Ccccccc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYI  326 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~  326 (360)
                      |+++|++++||.|++|++.|.+...|..|+++|++ +||+|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emy_A            3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSC
T ss_pred             CCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCC
Confidence            33344444444444444444444444444444433 2344433

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.19  E-value=3.2e-12  Score=79.03  Aligned_cols=45  Identities=18%  Similarity=0.162  Sum_probs=40.9

Q ss_pred             HHHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccc
Q psy6525         256 RHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMC  300 (360)
Q Consensus       256 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  300 (360)
                      +|+++|.++++|.|+.|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            366788899999999999999999999999999999999999987

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=2.9e-12  Score=79.22  Aligned_cols=44  Identities=23%  Similarity=0.249  Sum_probs=40.7

Q ss_pred             HHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccc
Q psy6525         257 HMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMC  300 (360)
Q Consensus       257 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  300 (360)
                      |+++|.++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            66788999999999999999999999999999999999999987

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=5e-12  Score=78.09  Aligned_cols=33  Identities=27%  Similarity=0.449  Sum_probs=13.2

Q ss_pred             HhhhcCCCccccccchhhhcCHHHHHHHHhhhc
Q psy6525         286 MQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHE  318 (360)
Q Consensus       286 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  318 (360)
                      +++|++++||.|++|++.|.+...|..|+++|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2ytj_A            4 GSSGTGEKPYICAECGKAFTIRSNLIKHQKIHT   36 (46)
T ss_dssp             SCTTSSCCSEECSSSCCEESSHHHHHHHHHHTS
T ss_pred             ccCCCCCcCeECCCCChhhCCHHHHHHHHHHcC
Confidence            333344444444444444444444444443333

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=3.1e-12  Score=79.09  Aligned_cols=45  Identities=22%  Similarity=0.304  Sum_probs=40.8

Q ss_pred             HHHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccc
Q psy6525         256 RHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMC  300 (360)
Q Consensus       256 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  300 (360)
                      +|+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            366788899999999999999999999999999999999999987

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=4e-12  Score=78.55  Aligned_cols=45  Identities=18%  Similarity=0.215  Sum_probs=40.0

Q ss_pred             HHHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccc
Q psy6525         256 RHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMC  300 (360)
Q Consensus       256 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  300 (360)
                      +|+++|+++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367788899999999999999999999999999999999999887

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=4.4e-12  Score=78.33  Aligned_cols=43  Identities=19%  Similarity=0.203  Sum_probs=18.2

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Cccccccc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYIC  327 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~C  327 (360)
                      |+++|++++||.|++|++.|.+...|..|+++|++ +||+|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            33444444444444444444444444444444433 34444433

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=4.9e-12  Score=78.15  Aligned_cols=33  Identities=18%  Similarity=0.497  Sum_probs=13.3

Q ss_pred             HhhhcCCCccccccchhhhcCHHHHHHHHhhhc
Q psy6525         286 MQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHE  318 (360)
Q Consensus       286 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  318 (360)
                      +++|++++||.|++|++.|.+...|..|+++|+
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2eoq_A            4 GSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHT   36 (46)
T ss_dssp             CCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcC
Confidence            333344444444444444444444444443333

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=5.3e-12  Score=77.97  Aligned_cols=43  Identities=21%  Similarity=0.301  Sum_probs=18.8

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Cccccccc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYIC  327 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~C  327 (360)
                      |+++|++++||.|++|++.|.+...|..|+++|++ +||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            34444444444444444444444444444444443 34444443

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=3.7e-12  Score=78.72  Aligned_cols=44  Identities=18%  Similarity=0.289  Sum_probs=38.9

Q ss_pred             HHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccc
Q psy6525         257 HMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMC  300 (360)
Q Consensus       257 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  300 (360)
                      |+++|+++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            66778888899999999999999999999999999999999887

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=3.9e-12  Score=78.60  Aligned_cols=43  Identities=21%  Similarity=0.338  Sum_probs=19.1

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Cccccccc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYIC  327 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~C  327 (360)
                      |+++|++++||.|++|++.|.+...|..|+++|++ +||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            34444444444444444444444444444444443 34444443

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=4.4e-12  Score=78.38  Aligned_cols=43  Identities=21%  Similarity=0.333  Sum_probs=18.2

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Cccccccc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYIC  327 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~C  327 (360)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++ +||+|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            33344444444444444444444444444444433 34444433

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=3.9e-12  Score=78.59  Aligned_cols=45  Identities=20%  Similarity=0.217  Sum_probs=38.9

Q ss_pred             HHHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccc
Q psy6525         256 RHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMC  300 (360)
Q Consensus       256 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  300 (360)
                      +|+++|+++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            366778888889999999999999999999999999999999887

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=3.8e-12  Score=78.63  Aligned_cols=43  Identities=23%  Similarity=0.322  Sum_probs=20.5

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Cccccccc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYIC  327 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~C  327 (360)
                      |+++|++++||.|++|++.|.+...|..|+++|++ +||+|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            34444444444444444444444444444444444 34444444

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=3e-12  Score=79.15  Aligned_cols=43  Identities=21%  Similarity=0.343  Sum_probs=20.9

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Cccccccc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYIC  327 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~C  327 (360)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++ +||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             cccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            44444444555555555555555555555544444 34554444

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.18  E-value=1e-11  Score=84.76  Aligned_cols=51  Identities=25%  Similarity=0.643  Sum_probs=22.4

Q ss_pred             Ccccccc--cccccCChhHHHHhHhhhcCCCcccccc--chhhhcCHHHHHHHHh
Q psy6525         265 EVHECNL--CAKLFACKRSLQDHMQRHEEPNKYQCAM--CKKQYASKKMLEKHIR  315 (360)
Q Consensus       265 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~  315 (360)
                      ++|.|..  |++.|.....|..|+++|++++||.|++  |++.|.+...|..|++
T Consensus        16 ~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~   70 (72)
T 2epa_A           16 RSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRR   70 (72)
T ss_dssp             CCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTT
T ss_pred             CceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhh
Confidence            3444444  4444444444444444444444444432  4444444444444443

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.18  E-value=4.5e-12  Score=78.33  Aligned_cols=41  Identities=20%  Similarity=0.386  Sum_probs=16.5

Q ss_pred             HhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Ccccccc
Q psy6525         286 MQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYI  326 (360)
Q Consensus       286 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~  326 (360)
                      +++|++++||.|++|++.|.+...|..|+++|++ +||+|++
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ema_A            4 GSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSC
T ss_pred             ccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            3334444444444444444444444444444333 2344433

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=3.7e-12  Score=78.73  Aligned_cols=42  Identities=19%  Similarity=0.241  Sum_probs=20.3

Q ss_pred             HHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccc
Q psy6525         259 RIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMC  300 (360)
Q Consensus       259 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  300 (360)
                      ++|.++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            5 SSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            344444444444444444444444444444444444444443

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=3.9e-12  Score=78.59  Aligned_cols=43  Identities=19%  Similarity=0.301  Sum_probs=19.5

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Cccccccc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYIC  327 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~C  327 (360)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++ +||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            44444444444444444444444444444444443 34444443

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=2.9e-12  Score=79.19  Aligned_cols=45  Identities=22%  Similarity=0.242  Sum_probs=39.0

Q ss_pred             HHHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccc
Q psy6525         256 RHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMC  300 (360)
Q Consensus       256 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  300 (360)
                      +|+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            366778888899999999999999999999999999999999887

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.18  E-value=2.9e-12  Score=79.15  Aligned_cols=45  Identities=22%  Similarity=0.258  Sum_probs=41.1

Q ss_pred             HHHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccc
Q psy6525         256 RHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMC  300 (360)
Q Consensus       256 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  300 (360)
                      +|+++|+++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            366788999999999999999999999999999999999999987

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=4.1e-12  Score=78.50  Aligned_cols=43  Identities=21%  Similarity=0.292  Sum_probs=18.6

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Cccccccc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYIC  327 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~C  327 (360)
                      |+++|++++||.|++|++.|.+...|..|+++|++ +||+|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            33444444444444444444444444444444443 34444443

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.18  E-value=3.6e-12  Score=78.78  Aligned_cols=45  Identities=20%  Similarity=0.273  Sum_probs=40.7

Q ss_pred             HHHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccc
Q psy6525         256 RHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMC  300 (360)
Q Consensus       256 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  300 (360)
                      +|+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            366788899999999999999999999999999999999999887

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=4.1e-12  Score=78.51  Aligned_cols=43  Identities=26%  Similarity=0.390  Sum_probs=20.7

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Cccccccc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYIC  327 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~C  327 (360)
                      |+++|++++||.|++|++.|.+...|..|+++|++ +||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            34444444455555555555555555555444444 34444444

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=3.3e-12  Score=78.95  Aligned_cols=45  Identities=22%  Similarity=0.253  Sum_probs=39.4

Q ss_pred             HHHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccc
Q psy6525         256 RHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMC  300 (360)
Q Consensus       256 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  300 (360)
                      +|+++|.++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            366778888999999999999999999999999999999999887

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=5.6e-12  Score=77.87  Aligned_cols=43  Identities=19%  Similarity=0.341  Sum_probs=18.3

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Cccccccc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYIC  327 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~C  327 (360)
                      |+++|++++||.|++|++.|.+...|..|+++|++ +||+|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             STTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             cccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            33444444444444444444444444444444433 34444433

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=5.1e-12  Score=78.05  Aligned_cols=41  Identities=22%  Similarity=0.379  Sum_probs=16.8

Q ss_pred             HhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Ccccccc
Q psy6525         286 MQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYI  326 (360)
Q Consensus       286 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~  326 (360)
                      +++|++++||.|++|++.|.+...|..|+++|++ +||+|++
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ytd_A            4 GSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSS   45 (46)
T ss_dssp             CCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSC
T ss_pred             ccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCC
Confidence            3344444444444444444444444444444433 2344433

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=4.9e-12  Score=78.12  Aligned_cols=42  Identities=21%  Similarity=0.377  Sum_probs=17.4

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Ccccccc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYI  326 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~  326 (360)
                      |+++|++++||.|++|++.|.+...|..|+++|++ +||+|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ytr_A            3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCC
T ss_pred             CCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            33344444444444444444444444444444433 3444443

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=4.4e-12  Score=78.37  Aligned_cols=45  Identities=18%  Similarity=0.211  Sum_probs=40.9

Q ss_pred             HHHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccc
Q psy6525         256 RHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMC  300 (360)
Q Consensus       256 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  300 (360)
                      +|+++|+++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            367788999999999999999999999999999999999999987

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=3.8e-12  Score=78.63  Aligned_cols=45  Identities=24%  Similarity=0.287  Sum_probs=40.6

Q ss_pred             HHHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccc
Q psy6525         256 RHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMC  300 (360)
Q Consensus       256 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  300 (360)
                      +|+++|+++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            366778899999999999999999999999999999999999987

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=3.7e-12  Score=78.73  Aligned_cols=43  Identities=19%  Similarity=0.272  Sum_probs=21.2

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Cccccccc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYIC  327 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~C  327 (360)
                      |+++|++++||.|++|++.|.+...|..|+++|++ +||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44444455555555555555555555555555444 34555444

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=4.5e-12  Score=78.29  Aligned_cols=41  Identities=20%  Similarity=0.307  Sum_probs=16.8

Q ss_pred             HhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Ccccccc
Q psy6525         286 MQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYI  326 (360)
Q Consensus       286 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~  326 (360)
                      +++|++++||.|++|++.|.+...|..|+++|++ +||+|++
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq0_A            4 GSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSC
T ss_pred             CcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            3334444444444444444444444444444433 2344443

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=7.4e-12  Score=77.34  Aligned_cols=44  Identities=14%  Similarity=0.080  Sum_probs=27.7

Q ss_pred             HHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccc
Q psy6525         257 HMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMC  300 (360)
Q Consensus       257 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  300 (360)
                      |+++|+++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            44456666666666666666666666666666666666666655

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=3.4e-12  Score=78.86  Aligned_cols=44  Identities=18%  Similarity=0.211  Sum_probs=40.3

Q ss_pred             HHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccc
Q psy6525         257 HMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMC  300 (360)
Q Consensus       257 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  300 (360)
                      |+++|+++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            66778899999999999999999999999999999999999987

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=3.9e-12  Score=78.59  Aligned_cols=45  Identities=20%  Similarity=0.233  Sum_probs=40.7

Q ss_pred             HHHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccc
Q psy6525         256 RHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMC  300 (360)
Q Consensus       256 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  300 (360)
                      +|+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            366788899999999999999999999999999999999999987

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=4.4e-12  Score=78.34  Aligned_cols=45  Identities=18%  Similarity=0.242  Sum_probs=41.7

Q ss_pred             HHHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccc
Q psy6525         256 RHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMC  300 (360)
Q Consensus       256 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  300 (360)
                      +|+++|+++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            467789999999999999999999999999999999999999987

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=3.9e-12  Score=78.59  Aligned_cols=44  Identities=18%  Similarity=0.209  Sum_probs=38.9

Q ss_pred             HHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccc
Q psy6525         257 HMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMC  300 (360)
Q Consensus       257 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  300 (360)
                      |+++|.++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            66778888999999999999999999999999999999999887

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=3.6e-12  Score=78.78  Aligned_cols=44  Identities=20%  Similarity=0.283  Sum_probs=38.6

Q ss_pred             HHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccc
Q psy6525         257 HMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMC  300 (360)
Q Consensus       257 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  300 (360)
                      |+++|+++++|.|+.|++.|.+...|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            56678888899999999999999999999999999999999887

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=5.6e-12  Score=77.86  Aligned_cols=44  Identities=20%  Similarity=0.251  Sum_probs=27.4

Q ss_pred             HHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccc
Q psy6525         257 HMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMC  300 (360)
Q Consensus       257 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  300 (360)
                      |+++|+++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             cccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            44556666666666666666666666666666666666666655

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=7.7e-12  Score=77.24  Aligned_cols=44  Identities=23%  Similarity=0.248  Sum_probs=28.3

Q ss_pred             HHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccc
Q psy6525         257 HMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMC  300 (360)
Q Consensus       257 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  300 (360)
                      |+++|.++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            44556666666666666666666666666666666666666655

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.17  E-value=5.5e-12  Score=77.93  Aligned_cols=43  Identities=16%  Similarity=0.308  Sum_probs=23.3

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Cccccccc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYIC  327 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~C  327 (360)
                      |+++|++++||.|++|++.|.+...|..|+++|++ +||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44555555555555555555555555555555554 35555544

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=5.6e-12  Score=77.88  Aligned_cols=42  Identities=21%  Similarity=0.395  Sum_probs=17.1

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Ccccccc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYI  326 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~  326 (360)
                      |+++|++++||.|++|++.|.+...|..|+++|++ +||+|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep2_A            3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSS   45 (46)
T ss_dssp             SSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            33344444444444444444444444444444433 2344433

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=3.3e-12  Score=78.96  Aligned_cols=45  Identities=18%  Similarity=0.262  Sum_probs=40.7

Q ss_pred             HHHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccc
Q psy6525         256 RHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMC  300 (360)
Q Consensus       256 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  300 (360)
                      +|+++|+++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            366788899999999999999999999999999999999999987

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=4e-12  Score=78.53  Aligned_cols=45  Identities=24%  Similarity=0.281  Sum_probs=40.0

Q ss_pred             HHHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccc
Q psy6525         256 RHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMC  300 (360)
Q Consensus       256 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  300 (360)
                      .|+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            366778889999999999999999999999999999999999887

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=3.3e-12  Score=78.94  Aligned_cols=45  Identities=18%  Similarity=0.217  Sum_probs=38.9

Q ss_pred             HHHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccc
Q psy6525         256 RHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMC  300 (360)
Q Consensus       256 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  300 (360)
                      +|+++|.++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            366778888889999999999999999999999998899999887

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=7e-12  Score=77.42  Aligned_cols=43  Identities=19%  Similarity=0.283  Sum_probs=27.7

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Cccccccc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYIC  327 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~C  327 (360)
                      |+++|.+++||.|++|++.|.+...|..|+++|++ +||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            55666666666666666666666666666666665 46666655

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=4.2e-12  Score=78.44  Aligned_cols=43  Identities=19%  Similarity=0.302  Sum_probs=20.4

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Cccccccc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYIC  327 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~C  327 (360)
                      |+++|++++||.|++|++.|.+...|..|+++|++ +||+|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34444444444444444444444444444444444 34444444

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=7.3e-12  Score=77.33  Aligned_cols=44  Identities=23%  Similarity=0.317  Sum_probs=27.3

Q ss_pred             HHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccc
Q psy6525         257 HMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMC  300 (360)
Q Consensus       257 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  300 (360)
                      |+++|.++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44455666666666666666666666666666666666666655

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=3.4e-12  Score=78.91  Aligned_cols=45  Identities=22%  Similarity=0.275  Sum_probs=38.8

Q ss_pred             HHHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccc
Q psy6525         256 RHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMC  300 (360)
Q Consensus       256 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  300 (360)
                      +|+++|.++++|.|++|++.|.+.+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            366778888889999999999999999999988988889998887

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.17  E-value=4.2e-12  Score=78.45  Aligned_cols=43  Identities=23%  Similarity=0.297  Sum_probs=22.2

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Cccccccc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYIC  327 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~C  327 (360)
                      |+++|++++||.|++|++.|.+...|..|+++|++ +||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            44455555555555555555555555555555544 35555544

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.17  E-value=7.5e-12  Score=77.28  Aligned_cols=44  Identities=18%  Similarity=0.203  Sum_probs=27.5

Q ss_pred             HHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccc
Q psy6525         257 HMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMC  300 (360)
Q Consensus       257 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  300 (360)
                      |+++|+++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            44556666666666666666666666666666666666666655

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.17  E-value=1.4e-11  Score=84.05  Aligned_cols=57  Identities=30%  Similarity=0.602  Sum_probs=52.1

Q ss_pred             hhcCCCcccccc--chhhhcCHHHHHHHHhhhcC-Ccccccc--cccccCChHHHHHHHHHh
Q psy6525         288 RHEEPNKYQCAM--CKKQYASKKMLEKHIRRHEG-QDYKCYI--CGNRYATQKYLEEHIRLH  344 (360)
Q Consensus       288 ~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~-~~~~C~~--C~~~f~~~~~l~~H~~~h  344 (360)
                      .+...++|.|+.  |++.|.+...|..|+++|++ +||+|.+  |++.|.+...|..|+++|
T Consensus        11 ~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           11 DSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             CccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            345678999999  99999999999999999988 7999976  999999999999999876

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=7.9e-12  Score=77.19  Aligned_cols=44  Identities=18%  Similarity=0.174  Sum_probs=27.1

Q ss_pred             HHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccc
Q psy6525         257 HMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMC  300 (360)
Q Consensus       257 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  300 (360)
                      |+++|.++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34455666666666666666666666666666666666666655

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=5.4e-12  Score=77.93  Aligned_cols=42  Identities=19%  Similarity=0.202  Sum_probs=17.3

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Ccccccc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYI  326 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~  326 (360)
                      |+++|++++||.|++|++.|.+...|..|+++|++ +||+|+.
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en8_A            3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSS   45 (46)
T ss_dssp             CCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSC
T ss_pred             ccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            33344444444444444444444444444444433 2344433

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=4.1e-12  Score=78.47  Aligned_cols=42  Identities=21%  Similarity=0.297  Sum_probs=19.9

Q ss_pred             HHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccc
Q psy6525         259 RIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMC  300 (360)
Q Consensus       259 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  300 (360)
                      ++|.++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            5 SSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             ccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            344444444444444444444444444444444444444443

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=3.5e-12  Score=78.84  Aligned_cols=44  Identities=16%  Similarity=0.215  Sum_probs=24.5

Q ss_pred             HHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccc
Q psy6525         257 HMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMC  300 (360)
Q Consensus       257 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  300 (360)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34445555555555555555555555555555555555555554

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=3.3e-12  Score=78.95  Aligned_cols=42  Identities=21%  Similarity=0.292  Sum_probs=19.9

Q ss_pred             HHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccc
Q psy6525         259 RIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMC  300 (360)
Q Consensus       259 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  300 (360)
                      ++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            5 SSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             cCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            344444444444444444444444444444444444444443

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=4.1e-12  Score=78.50  Aligned_cols=43  Identities=21%  Similarity=0.345  Sum_probs=26.5

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Cccccccc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYIC  327 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~C  327 (360)
                      |+++|++++||.|++|++.|.+...|..|+++|++ +||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             cCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            55566666666666666666666666666666655 45666655

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=5.2e-12  Score=78.00  Aligned_cols=43  Identities=19%  Similarity=0.200  Sum_probs=25.3

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Cccccccc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYIC  327 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~C  327 (360)
                      |+++|++++||.|++|++.|.+...|..|+++|++ +||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             CcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            55556666666666666666666666666655555 45555554

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=4.6e-12  Score=78.27  Aligned_cols=43  Identities=23%  Similarity=0.386  Sum_probs=20.3

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Cccccccc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYIC  327 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~C  327 (360)
                      |+++|++++||.|++|++.|.+...|..|+++|++ +||+|++|
T Consensus         3 h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            34444444444444444444444444444444444 34444444

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=4e-12  Score=78.56  Aligned_cols=43  Identities=26%  Similarity=0.348  Sum_probs=20.5

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Cccccccc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYIC  327 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~C  327 (360)
                      |+++|++++||.|++|++.|.+...|..|+++|++ +||+|++|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            34444444444444444444444444444444444 34444444

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=6.3e-12  Score=77.62  Aligned_cols=44  Identities=23%  Similarity=0.254  Sum_probs=26.5

Q ss_pred             HHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccc
Q psy6525         257 HMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMC  300 (360)
Q Consensus       257 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  300 (360)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            44455566666666666666666666666666666666666555

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=4.4e-12  Score=78.34  Aligned_cols=45  Identities=20%  Similarity=0.226  Sum_probs=40.5

Q ss_pred             HHHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccc
Q psy6525         256 RHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMC  300 (360)
Q Consensus       256 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  300 (360)
                      +|+++|+++++|.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            366778899999999999999999999999999999999999887

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=9.1e-12  Score=76.90  Aligned_cols=41  Identities=17%  Similarity=0.164  Sum_probs=17.2

Q ss_pred             HhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Ccccccc
Q psy6525         286 MQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYI  326 (360)
Q Consensus       286 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~  326 (360)
                      +++|++++||.|++|++.|.+...|..|+++|++ +||+|++
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yso_A            4 GSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSS   45 (46)
T ss_dssp             SCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTC
T ss_pred             ccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3344444444444444444444444444444433 3444443

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=5.1e-12  Score=78.07  Aligned_cols=43  Identities=16%  Similarity=0.260  Sum_probs=21.4

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Cccccccc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYIC  327 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~C  327 (360)
                      |+++|++++||.|++|++.|.+...|..|+++|++ +||+|++|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            34444555555555555555555555555555444 34555444

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=5.5e-12  Score=77.91  Aligned_cols=44  Identities=18%  Similarity=0.191  Sum_probs=38.4

Q ss_pred             HHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccc
Q psy6525         257 HMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMC  300 (360)
Q Consensus       257 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  300 (360)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56678888889999999999999999999999999999999887

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=9.8e-12  Score=76.76  Aligned_cols=44  Identities=16%  Similarity=0.178  Sum_probs=25.9

Q ss_pred             HHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccc
Q psy6525         257 HMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMC  300 (360)
Q Consensus       257 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  300 (360)
                      |+++|.++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            34455555666666666666666666666666666666666555

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=7.2e-12  Score=77.36  Aligned_cols=44  Identities=18%  Similarity=0.187  Sum_probs=27.4

Q ss_pred             HHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccc
Q psy6525         257 HMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMC  300 (360)
Q Consensus       257 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  300 (360)
                      |+++|.++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            44455666666666666666666666666666666666666655

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=4.2e-12  Score=78.44  Aligned_cols=44  Identities=20%  Similarity=0.347  Sum_probs=27.9

Q ss_pred             HhHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Cccccccc
Q psy6525         284 DHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYIC  327 (360)
Q Consensus       284 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~C  327 (360)
                      +|+++|++++||.|++|++.|.+...|..|+++|++ +||+|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            355666666666666666666666666666666665 46666655

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=7.7e-12  Score=77.24  Aligned_cols=42  Identities=21%  Similarity=0.344  Sum_probs=18.0

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Ccccccc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYI  326 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~  326 (360)
                      |+++|++++||.|++|++.|.+...|..|+++|++ +||+|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ep3_A            3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTC
T ss_pred             CCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            33444444444444444444444444444444443 3444443

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=4.2e-12  Score=78.47  Aligned_cols=45  Identities=18%  Similarity=0.197  Sum_probs=40.3

Q ss_pred             HHHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccc
Q psy6525         256 RHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMC  300 (360)
Q Consensus       256 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  300 (360)
                      +|+++|+++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            366788899999999999999999999999999999999999875

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.14  E-value=6.8e-12  Score=77.49  Aligned_cols=43  Identities=23%  Similarity=0.304  Sum_probs=20.9

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Cccccccc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYIC  327 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~C  327 (360)
                      |+++|++++||.|++|++.|.+...|..|+++|++ +||+|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34444444555555555555555555555544444 34555444

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.14  E-value=1e-11  Score=76.63  Aligned_cols=44  Identities=20%  Similarity=0.240  Sum_probs=27.5

Q ss_pred             HHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccc
Q psy6525         257 HMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMC  300 (360)
Q Consensus       257 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  300 (360)
                      |+++|.++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34455666666666666666666666666666666666666655

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=6.2e-12  Score=77.69  Aligned_cols=41  Identities=17%  Similarity=0.164  Sum_probs=19.1

Q ss_pred             HhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccc
Q psy6525         260 IHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMC  300 (360)
Q Consensus       260 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  300 (360)
                      +|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            6 SGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            34444444444444444444444444444444444444443

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.13  E-value=2e-11  Score=78.18  Aligned_cols=44  Identities=18%  Similarity=0.285  Sum_probs=21.4

Q ss_pred             cCCCcccccccccccCChhHHHHhHh-hhcCCCccccccchhhhc
Q psy6525         262 QGLEVHECNLCAKLFACKRSLQDHMQ-RHEEPNKYQCAMCKKQYA  305 (360)
Q Consensus       262 ~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~  305 (360)
                      .++++|.|++|++.|.....|..|++ +|.+++||.|++|++.|.
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~   52 (54)
T 2eps_A            8 SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS   52 (54)
T ss_dssp             CSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSC
T ss_pred             CCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCC
Confidence            34444555555555555555555543 444444555555544444

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=1.2e-11  Score=76.28  Aligned_cols=43  Identities=23%  Similarity=0.301  Sum_probs=27.1

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Cccccccc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYIC  327 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~C  327 (360)
                      |+++|.+++||.|++|++.|.+...|..|+++|++ +||+|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            45566666666666666666666666666666655 46666655

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=9.5e-12  Score=77.19  Aligned_cols=43  Identities=21%  Similarity=0.325  Sum_probs=22.0

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHh-hhcC-Cccccccc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIR-RHEG-QDYKCYIC  327 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~-~h~~-~~~~C~~C  327 (360)
                      |+++|.+++||.|++|++.|.+...|..|++ +|++ +||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            4444555555555555555555555555555 4544 35555544

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.7e-11  Score=76.07  Aligned_cols=44  Identities=23%  Similarity=0.212  Sum_probs=28.4

Q ss_pred             HHHHhcCCCcccccccccccCChhHHHHhHh-hhcCCCccccccc
Q psy6525         257 HMRIHQGLEVHECNLCAKLFACKRSLQDHMQ-RHEEPNKYQCAMC  300 (360)
Q Consensus       257 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C  300 (360)
                      |+++|.++++|.|++|++.|.....|..|++ +|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            4455666666666666666666666666666 6666666666655

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=1.2e-11  Score=76.28  Aligned_cols=42  Identities=19%  Similarity=0.350  Sum_probs=20.5

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Ccccccc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYI  326 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~  326 (360)
                      |+++|++++||.|++|++.|.+...|..|+++|++ +||+|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            44444445555555555555555555555555444 3455444

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=2.2e-11  Score=75.12  Aligned_cols=44  Identities=18%  Similarity=0.243  Sum_probs=24.5

Q ss_pred             HHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccc
Q psy6525         257 HMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMC  300 (360)
Q Consensus       257 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  300 (360)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34445555555555555555555555555555555555555543

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.10  E-value=3.4e-11  Score=77.07  Aligned_cols=45  Identities=22%  Similarity=0.439  Sum_probs=25.4

Q ss_pred             hcCCCccccccchhhhcCHHHHHHHHh-hhcC-CcccccccccccCC
Q psy6525         289 HEEPNKYQCAMCKKQYASKKMLEKHIR-RHEG-QDYKCYICGNRYAT  333 (360)
Q Consensus       289 h~~~~~~~C~~C~~~f~~~~~L~~H~~-~h~~-~~~~C~~C~~~f~~  333 (360)
                      |.+++||.|++|++.|.+...|..|++ +|++ +||+|.+|++.|.+
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            7 GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            445555666666666666666666654 4554 45555555555543

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.07  E-value=3e-12  Score=84.68  Aligned_cols=52  Identities=8%  Similarity=0.341  Sum_probs=35.2

Q ss_pred             HHhHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-CcccccccccccCChHHH
Q psy6525         283 QDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYICGNRYATQKYL  337 (360)
Q Consensus       283 ~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~C~~~f~~~~~l  337 (360)
                      ..|+++|++++||.|+.|++.|.....|.   ++|++ +||+|++||+.|....++
T Consensus         3 ~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~   55 (62)
T 1vd4_A            3 ETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESA   55 (62)
T ss_dssp             CCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTC
T ss_pred             hhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCccc
Confidence            45666777777777777777777766665   56665 577777777777655543

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.06  E-value=2.4e-11  Score=73.31  Aligned_cols=38  Identities=26%  Similarity=0.366  Sum_probs=18.8

Q ss_pred             HhcCCCcccccccccccCChhHHHHhHhhhcCCCcccc
Q psy6525         260 IHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQC  297 (360)
Q Consensus       260 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  297 (360)
                      +|+++++|.|++|++.|.+...|..|+++|++++||.|
T Consensus         4 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2el5_A            4 GSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS   41 (42)
T ss_dssp             SSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCC
T ss_pred             CCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            34444455555555555555555555555555444444

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.06  E-value=8.2e-11  Score=72.13  Aligned_cols=41  Identities=17%  Similarity=0.298  Sum_probs=25.1

Q ss_pred             hcCCCcccccccccccCChhHHHHhHhhhcCCCccccccch
Q psy6525         261 HQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCK  301 (360)
Q Consensus       261 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~  301 (360)
                      |+++++|.|+.|++.|.....|..|+++|+++++|.|++||
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             cCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            45556666666666666666666666666666666666654

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.05  E-value=4.9e-11  Score=71.95  Aligned_cols=40  Identities=28%  Similarity=0.493  Sum_probs=21.3

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Ccccc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKC  324 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C  324 (360)
                      |+++|++++||.|++|++.|.+...|..|+++|++ +||+|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS   41 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            34455555555555555555555555555555554 35554

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.05  E-value=6.4e-11  Score=73.74  Aligned_cols=40  Identities=20%  Similarity=0.395  Sum_probs=23.4

Q ss_pred             cCCCcccccccccccCChhHHHHhHhhhcCCCccccccch
Q psy6525         262 QGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCK  301 (360)
Q Consensus       262 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~  301 (360)
                      .++++|.|.+|++.|.+...|..|+++|++++||.|++|+
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~   47 (48)
T 2epr_A            8 RTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS   47 (48)
T ss_dssp             CCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCC
T ss_pred             CCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCC
Confidence            4455556666666666666666666566555566665555

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=4.1e-11  Score=73.86  Aligned_cols=34  Identities=24%  Similarity=0.499  Sum_probs=14.0

Q ss_pred             HhhhcCCCccccccchhhhcCHHHHHHHHhhhcC
Q psy6525         286 MQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG  319 (360)
Q Consensus       286 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  319 (360)
                      +++|++++||.|++|++.|.+...|..|+++|++
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2eow_A            4 GSSGTGEKPYKCNECGKAFRARSSLAIHQATHSG   37 (46)
T ss_dssp             CCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCC
T ss_pred             cCCCCCCCCeeccccCChhcCHHHHHHHHHHcCC
Confidence            3334444444444444444444444444444433

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=4.7e-11  Score=73.60  Aligned_cols=33  Identities=27%  Similarity=0.511  Sum_probs=13.3

Q ss_pred             HhhhcCCCccccccchhhhcCHHHHHHHHhhhc
Q psy6525         286 MQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHE  318 (360)
Q Consensus       286 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  318 (360)
                      +++|++++||.|++|++.|.+...|..|+++|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2eq2_A            4 GSSGTGGKPYQCNECGKAFSQTSKLARHQRVHT   36 (46)
T ss_dssp             CCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGC
T ss_pred             ccccCCCCCeECCCCCcccCCHHHHHHHHHHcC
Confidence            333444444444444444444444444444333

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=4.4e-11  Score=73.76  Aligned_cols=34  Identities=24%  Similarity=0.467  Sum_probs=14.0

Q ss_pred             HhhhcCCCccccccchhhhcCHHHHHHHHhhhcC
Q psy6525         286 MQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG  319 (360)
Q Consensus       286 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  319 (360)
                      +++|++++||.|++|++.|.+...|..|+++|++
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~   37 (46)
T 2enf_A            4 GSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTG   37 (46)
T ss_dssp             CCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTT
T ss_pred             CcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCC
Confidence            3334444444444444444444444444444333

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.05  E-value=2.7e-11  Score=74.70  Aligned_cols=41  Identities=22%  Similarity=0.372  Sum_probs=21.3

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Cccccc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCY  325 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~  325 (360)
                      |+++|++++||.|++|++.|.+...|..|+++|++ +||+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A            3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            44455555555555555555555555555555544 355554

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=2.7e-11  Score=74.70  Aligned_cols=41  Identities=24%  Similarity=0.368  Sum_probs=20.6

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Cccccc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCY  325 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~  325 (360)
                      |+++|++++||.|++|++.|.+...|..|+++|++ +||+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            44445555555555555555555555555555544 345543

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=4.9e-11  Score=73.53  Aligned_cols=35  Identities=26%  Similarity=0.531  Sum_probs=14.6

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG  319 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  319 (360)
                      |+++|++++||.|++|++.|.+...|..|+++|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2yth_A            3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTG   37 (46)
T ss_dssp             CCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTT
T ss_pred             cccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCC
Confidence            33344444444444444444444444444444433

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.05  E-value=5.2e-11  Score=73.42  Aligned_cols=42  Identities=21%  Similarity=0.287  Sum_probs=21.4

Q ss_pred             HHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccc
Q psy6525         257 HMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCA  298 (360)
Q Consensus       257 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  298 (360)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A            3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            334444555555555555555555555555555555555554

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=3.9e-11  Score=72.38  Aligned_cols=42  Identities=17%  Similarity=0.224  Sum_probs=36.0

Q ss_pred             HHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccc
Q psy6525         257 HMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCA  298 (360)
Q Consensus       257 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  298 (360)
                      |+++|.++++|.|++|++.|.+...|..|+++|++++||.|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            456688888999999999999999999999999998888884

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=5.2e-11  Score=73.42  Aligned_cols=42  Identities=26%  Similarity=0.267  Sum_probs=21.2

Q ss_pred             HHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccc
Q psy6525         257 HMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCA  298 (360)
Q Consensus       257 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  298 (360)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            334444555555555555555555555555555555555553

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=3.6e-11  Score=74.17  Aligned_cols=44  Identities=20%  Similarity=0.248  Sum_probs=39.3

Q ss_pred             HHHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCcccccc
Q psy6525         256 RHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAM  299 (360)
Q Consensus       256 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  299 (360)
                      +|+++|+++++|.|++|++.|.+...|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            36677889999999999999999999999999999999999974

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=4.5e-11  Score=73.70  Aligned_cols=33  Identities=24%  Similarity=0.567  Sum_probs=13.3

Q ss_pred             HhhhcCCCccccccchhhhcCHHHHHHHHhhhc
Q psy6525         286 MQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHE  318 (360)
Q Consensus       286 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  318 (360)
                      +++|++++||.|++|++.|.+...|..|+++|+
T Consensus         4 ~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2em3_A            4 GSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHT   36 (46)
T ss_dssp             CCCCSSCCSEECSSSCCEESSHHHHHHHHHHHC
T ss_pred             CCCCCCCcCeECCCCCcccCCHHHHHHHHHHhC
Confidence            333444444444444444444444444444333

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=3.2e-11  Score=74.39  Aligned_cols=43  Identities=21%  Similarity=0.248  Sum_probs=38.2

Q ss_pred             HHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCcccccc
Q psy6525         257 HMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAM  299 (360)
Q Consensus       257 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  299 (360)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            6677888999999999999999999999999999999999874

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=5.3e-11  Score=73.37  Aligned_cols=33  Identities=27%  Similarity=0.491  Sum_probs=13.2

Q ss_pred             HhhhcCCCccccccchhhhcCHHHHHHHHhhhc
Q psy6525         286 MQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHE  318 (360)
Q Consensus       286 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  318 (360)
                      +++|++++||.|++|++.|.+...|..|+++|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2ep1_A            4 GSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHT   36 (46)
T ss_dssp             CCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGS
T ss_pred             ccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhC
Confidence            333344444444444444444444444443333

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=4.2e-11  Score=73.86  Aligned_cols=33  Identities=30%  Similarity=0.509  Sum_probs=13.4

Q ss_pred             HhhhcCCCccccccchhhhcCHHHHHHHHhhhc
Q psy6525         286 MQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHE  318 (360)
Q Consensus       286 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  318 (360)
                      +++|++++||.|++|++.|.+...|..|+++|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2ytp_A            4 GSSGTGERHYECSECGKAFARKSTLIMHQRIHT   36 (46)
T ss_dssp             CCSSCCCCCEECSSSCCEESSHHHHHHHHTTTS
T ss_pred             ccCcCCCCCeECCcCCcccCCHHHHHHHHHHhC
Confidence            333444444444444444444444444444433

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=3.5e-11  Score=74.17  Aligned_cols=41  Identities=22%  Similarity=0.311  Sum_probs=19.3

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Cccccc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCY  325 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~  325 (360)
                      |+++|++++||.|++|++.|.+...|..|+++|++ +||+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            34444444444444444444444444444444444 344443

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=3.4e-11  Score=74.29  Aligned_cols=43  Identities=23%  Similarity=0.337  Sum_probs=37.0

Q ss_pred             HHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCcccccc
Q psy6525         257 HMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAM  299 (360)
Q Consensus       257 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  299 (360)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5667888888999999999999999999999998888988864

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=3.2e-11  Score=74.34  Aligned_cols=43  Identities=23%  Similarity=0.285  Sum_probs=36.9

Q ss_pred             HHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCcccccc
Q psy6525         257 HMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAM  299 (360)
Q Consensus       257 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  299 (360)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             ccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            5667888888999999999999999999998898888888864

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=3.4e-11  Score=74.25  Aligned_cols=41  Identities=20%  Similarity=0.275  Sum_probs=22.4

Q ss_pred             HhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccc
Q psy6525         260 IHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMC  300 (360)
Q Consensus       260 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  300 (360)
                      +|.++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            6 SGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34455555555555555555555555555555555555554

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=4.9e-11  Score=73.54  Aligned_cols=33  Identities=21%  Similarity=0.433  Sum_probs=13.3

Q ss_pred             HhhhcCCCccccccchhhhcCHHHHHHHHhhhc
Q psy6525         286 MQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHE  318 (360)
Q Consensus       286 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  318 (360)
                      +++|++++||.|++|++.|.+...|..|+++|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2yti_A            4 GSSGTGEKPYKCNECGKVFTQNSHLARHRGIHT   36 (46)
T ss_dssp             CCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTS
T ss_pred             CcCCCCCcCeECCCCCcccCChhHHHHHhHhcC
Confidence            333444444444444444444444444443333

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=4e-11  Score=73.90  Aligned_cols=44  Identities=25%  Similarity=0.254  Sum_probs=38.7

Q ss_pred             HHHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCcccccc
Q psy6525         256 RHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAM  299 (360)
Q Consensus       256 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  299 (360)
                      +|+++|.++++|.|+.|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36677888999999999999999999999999999999999874

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=3.2e-11  Score=74.38  Aligned_cols=43  Identities=26%  Similarity=0.261  Sum_probs=38.6

Q ss_pred             HHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCcccccc
Q psy6525         257 HMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAM  299 (360)
Q Consensus       257 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  299 (360)
                      |+++|+++++|.|++|++.|.+...|..|+++|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             cccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            6677889999999999999999999999999999999999974

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=3.2e-11  Score=74.36  Aligned_cols=41  Identities=22%  Similarity=0.284  Sum_probs=22.0

Q ss_pred             HhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccc
Q psy6525         260 IHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMC  300 (360)
Q Consensus       260 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  300 (360)
                      +|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         6 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            6 SGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            34455555555555555555555555555555555555544

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=4.2e-11  Score=73.84  Aligned_cols=44  Identities=18%  Similarity=0.264  Sum_probs=39.2

Q ss_pred             HHHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCcccccc
Q psy6525         256 RHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAM  299 (360)
Q Consensus       256 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  299 (360)
                      +|+++|.++++|.|+.|++.|.+...|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            36677889999999999999999999999999999999999974

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=3.5e-11  Score=74.17  Aligned_cols=43  Identities=21%  Similarity=0.258  Sum_probs=38.2

Q ss_pred             HHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCcccccc
Q psy6525         257 HMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAM  299 (360)
Q Consensus       257 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  299 (360)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            5677888999999999999999999999999999999999874

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=3.5e-11  Score=74.21  Aligned_cols=41  Identities=22%  Similarity=0.387  Sum_probs=20.0

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Cccccc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCY  325 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~  325 (360)
                      |+++|++++||.|++|++.|.+...|..|+++|++ +||+|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A            3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             SSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred             CCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence            44444445555555555555555555555554444 344443

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=5.1e-11  Score=73.42  Aligned_cols=34  Identities=26%  Similarity=0.476  Sum_probs=14.2

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHE  318 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  318 (360)
                      |+++|++++||.|++|++.|.+...|..|+++|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2yts_A            3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHT   36 (46)
T ss_dssp             CSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTS
T ss_pred             CCCCCCCCcCEECCCCChhhCChHHHHHHHHhcC
Confidence            3334444444444444444444444444444443

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=5.7e-11  Score=73.24  Aligned_cols=33  Identities=24%  Similarity=0.516  Sum_probs=13.7

Q ss_pred             HhhhcCCCccccccchhhhcCHHHHHHHHhhhc
Q psy6525         286 MQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHE  318 (360)
Q Consensus       286 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  318 (360)
                      +++|++++||.|++|++.|.+...|..|+++|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2em6_A            4 GSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHT   36 (46)
T ss_dssp             CSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTS
T ss_pred             ccccCCCCCeECCCCCcccCCHHHHHHHHHHcC
Confidence            333444444444444444444444444444443

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=4.7e-11  Score=73.64  Aligned_cols=40  Identities=25%  Similarity=0.359  Sum_probs=18.7

Q ss_pred             HHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccc
Q psy6525         259 RIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCA  298 (360)
Q Consensus       259 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  298 (360)
                      ++|.++++|.|++|++.|.+...|..|+++|++++||.|+
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en9_A            5 SSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             SSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred             CCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            3344444444444444444444444444444444444443

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=5.1e-11  Score=73.44  Aligned_cols=33  Identities=24%  Similarity=0.494  Sum_probs=13.4

Q ss_pred             HhhhcCCCccccccchhhhcCHHHHHHHHhhhc
Q psy6525         286 MQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHE  318 (360)
Q Consensus       286 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  318 (360)
                      +++|++++||.|++|++.|.+...|..|+++|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2ytf_A            4 GSSGTGEKPFECSECQKAFNTKSNLIVHQRTHT   36 (46)
T ss_dssp             CCSSCCCCSEECSSSCCEESSHHHHHHHHHTSC
T ss_pred             CCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhC
Confidence            333444444444444444444444444444433

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=3.9e-11  Score=74.01  Aligned_cols=40  Identities=20%  Similarity=0.326  Sum_probs=19.0

Q ss_pred             HHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccc
Q psy6525         259 RIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCA  298 (360)
Q Consensus       259 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  298 (360)
                      ++|.++++|.|++|++.|.+...|..|+++|++++||.|+
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            5 SSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             SSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            3344444444444444444444444444444444444443

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=6.7e-11  Score=72.89  Aligned_cols=42  Identities=21%  Similarity=0.252  Sum_probs=23.2

Q ss_pred             HHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccc
Q psy6525         257 HMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCA  298 (360)
Q Consensus       257 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  298 (360)
                      |+++|.++++|.|++|++.|.+...|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            344455555555555555555555555555555555555554

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=4.1e-11  Score=73.89  Aligned_cols=41  Identities=24%  Similarity=0.408  Sum_probs=20.3

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Cccccc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCY  325 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~  325 (360)
                      |+++|+++++|.|++|++.|.+...|..|+++|++ +||+|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            44445555555555555555555555555555444 344443

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=3.8e-11  Score=74.03  Aligned_cols=43  Identities=23%  Similarity=0.232  Sum_probs=38.8

Q ss_pred             HHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCcccccc
Q psy6525         257 HMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAM  299 (360)
Q Consensus       257 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  299 (360)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            6677889999999999999999999999999999999999974

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=1.3e-11  Score=84.76  Aligned_cols=65  Identities=18%  Similarity=0.235  Sum_probs=55.2

Q ss_pred             hHHHHhHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-CcccccccccccCChHHHHHHHHHhCCC
Q psy6525         280 RSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYICGNRYATQKYLEEHIRLHQGH  347 (360)
Q Consensus       280 ~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~C~~~f~~~~~l~~H~~~h~g~  347 (360)
                      ..|..|+++|.+++|+.|+.|++.|. ...|..|+ .|.+ +|+.|+.|++.|. ...|..|+++|.++
T Consensus         3 ~~L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~   68 (75)
T 2d9k_A            3 SGSSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGRE   68 (75)
T ss_dssp             CCCSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTB
T ss_pred             hHHHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccCC
Confidence            45778888889999999999999994 88899998 7776 7899999999887 48899999988876

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=6.4e-11  Score=72.99  Aligned_cols=42  Identities=21%  Similarity=0.297  Sum_probs=23.8

Q ss_pred             HHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccc
Q psy6525         257 HMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCA  298 (360)
Q Consensus       257 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  298 (360)
                      |+++|.++++|.|.+|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A            3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             SSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred             CCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence            444555555555555555555555555555555555555554

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=2.8e-11  Score=74.63  Aligned_cols=41  Identities=20%  Similarity=0.328  Sum_probs=20.0

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Cccccc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCY  325 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~  325 (360)
                      |+++|++++||.|++|++.|.+...|..|+++|++ +||+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             SCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             ccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            44444445555555555555555555555554444 344443

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=4.3e-11  Score=73.79  Aligned_cols=43  Identities=21%  Similarity=0.303  Sum_probs=38.2

Q ss_pred             HHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCcccccc
Q psy6525         257 HMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAM  299 (360)
Q Consensus       257 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  299 (360)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            6677888999999999999999999999999999999999874

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=5.9e-11  Score=73.16  Aligned_cols=33  Identities=21%  Similarity=0.400  Sum_probs=13.6

Q ss_pred             HhhhcCCCccccccchhhhcCHHHHHHHHhhhc
Q psy6525         286 MQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHE  318 (360)
Q Consensus       286 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  318 (360)
                      +++|++++||.|++|++.|.+...|..|+++|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2eq1_A            4 GSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHT   36 (46)
T ss_dssp             CCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTC
T ss_pred             ccccCCCCCeECCcCChhhCCHHHHHHHHHHhC
Confidence            333444444444444444444444444444433

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=7.5e-11  Score=72.68  Aligned_cols=42  Identities=24%  Similarity=0.272  Sum_probs=23.1

Q ss_pred             HHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccc
Q psy6525         257 HMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCA  298 (360)
Q Consensus       257 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  298 (360)
                      |+++|.++++|.|++|++.|.+...|..|+++|++++||.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            344455555555555555555555555555555555555554

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=4.2e-11  Score=73.84  Aligned_cols=43  Identities=21%  Similarity=0.261  Sum_probs=38.3

Q ss_pred             HHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCcccccc
Q psy6525         257 HMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAM  299 (360)
Q Consensus       257 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  299 (360)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             cccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            6677888999999999999999999999999999999999874

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=3.7e-11  Score=74.05  Aligned_cols=43  Identities=23%  Similarity=0.285  Sum_probs=37.4

Q ss_pred             HHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCcccccc
Q psy6525         257 HMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAM  299 (360)
Q Consensus       257 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  299 (360)
                      |+++|+++++|.|++|++.|.+...|..|+++|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5667888889999999999999999999999999999998864

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.02  E-value=3.3e-11  Score=77.14  Aligned_cols=46  Identities=13%  Similarity=0.213  Sum_probs=27.1

Q ss_pred             cccCChhHHHHhHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC
Q psy6525         274 KLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG  319 (360)
Q Consensus       274 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  319 (360)
                      +.|.....|..|+++|++++||.|++|++.|.+.+.|..|+++|++
T Consensus         4 k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   49 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHF   49 (54)
T ss_dssp             CCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTT
T ss_pred             cccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhcc
Confidence            3455555555566666666666666666666666666666665555

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.02  E-value=5.3e-11  Score=76.17  Aligned_cols=50  Identities=14%  Similarity=0.141  Sum_probs=27.3

Q ss_pred             CccCCHHHHHHHHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCcc
Q psy6525         246 KVTPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKY  295 (360)
Q Consensus       246 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  295 (360)
                      +.|.....|..|+++|.++++|.|+.|++.|.....|..|+++|++++||
T Consensus         4 k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             cccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCC
Confidence            34444455555555555555555555555555555555555555555554

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=6.6e-11  Score=72.91  Aligned_cols=42  Identities=21%  Similarity=0.333  Sum_probs=26.6

Q ss_pred             HhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Cccccccc
Q psy6525         286 MQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYIC  327 (360)
Q Consensus       286 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~C  327 (360)
                      +++|++++||.|++|++.|.+...|..|+++|++ +||+|++|
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            4 GSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            3456666666666666666666666666666665 46666655

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.02  E-value=1.2e-10  Score=71.37  Aligned_cols=41  Identities=22%  Similarity=0.503  Sum_probs=23.4

Q ss_pred             hhcCCCccccccchhhhcCHHHHHHHHhhhcC-Ccccccccc
Q psy6525         288 RHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYICG  328 (360)
Q Consensus       288 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~C~  328 (360)
                      +|++++||.|++|++.|.....|..|+++|++ ++|.|++||
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            35555556666666555555555555555555 455555554

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=5.6e-11  Score=73.24  Aligned_cols=33  Identities=30%  Similarity=0.532  Sum_probs=13.4

Q ss_pred             HhhhcCCCccccccchhhhcCHHHHHHHHhhhc
Q psy6525         286 MQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHE  318 (360)
Q Consensus       286 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  318 (360)
                      +++|++++||.|++|++.|.+...|..|+++|+
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2yrj_A            4 GSSGTGEKPYRCGECGKAFAQKANLTQHQRIHT   36 (46)
T ss_dssp             CCCCCCCCCEECSSSCCEESSHHHHHHHHTTTS
T ss_pred             ccCCCCCCCeECCCCCCccCCHHHHHHHHHHcC
Confidence            333444444444444444444444444444333

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=7.6e-11  Score=72.65  Aligned_cols=41  Identities=20%  Similarity=0.347  Sum_probs=25.8

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Cccccc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCY  325 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~  325 (360)
                      |+++|++++||.|++|++.|.+...|..|+++|++ +||+|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            45566666666666666666666666666666655 466664

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=4e-11  Score=73.14  Aligned_cols=40  Identities=25%  Similarity=0.468  Sum_probs=19.1

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Ccccc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKC  324 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C  324 (360)
                      |+++|++++||.|++|++.|.+...|..|+++|++ +||+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS   43 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCC
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            44444444444444444444444444444444444 34444

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=6.3e-11  Score=73.05  Aligned_cols=42  Identities=21%  Similarity=0.355  Sum_probs=20.6

Q ss_pred             HHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccc
Q psy6525         257 HMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCA  298 (360)
Q Consensus       257 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  298 (360)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             SCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             ccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            334444445555555555555555555555555555555443

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=9.8e-11  Score=72.15  Aligned_cols=41  Identities=22%  Similarity=0.363  Sum_probs=22.9

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Cccccc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCY  325 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~  325 (360)
                      |+++|++++||.|++|++.|.+...|..|+++|++ +||+|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en9_A            3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            44555555555555555555555555555555554 455554

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=4.3e-11  Score=73.79  Aligned_cols=43  Identities=23%  Similarity=0.276  Sum_probs=38.2

Q ss_pred             HHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCcccccc
Q psy6525         257 HMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAM  299 (360)
Q Consensus       257 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  299 (360)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            6677888999999999999999999999999999999999874

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=4.8e-11  Score=72.76  Aligned_cols=40  Identities=28%  Similarity=0.414  Sum_probs=19.3

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Ccccc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKC  324 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C  324 (360)
                      |+++|++++||.|++|++.|.+...|..|+++|++ +||+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2en7_A            3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS   43 (44)
T ss_dssp             SCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCC
T ss_pred             CCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCC
Confidence            44444444455555555555555555555544444 34444

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=5e-11  Score=72.70  Aligned_cols=40  Identities=25%  Similarity=0.456  Sum_probs=20.4

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Ccccc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKC  324 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C  324 (360)
                      |+++|++++||.|++|++.|.+...|..|+++|++ +||+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A            3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             CSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             CccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            44445555555555555555555555555555544 34544

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=7.8e-11  Score=71.79  Aligned_cols=40  Identities=28%  Similarity=0.348  Sum_probs=19.8

Q ss_pred             HHHhcCCCcccccccccccCChhHHHHhHhhhcCCCcccc
Q psy6525         258 MRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQC  297 (360)
Q Consensus       258 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  297 (360)
                      +++|.++++|.|++|++.|.+...|..|+++|++++||.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A            4 GSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             SSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             ccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            3444444455555555555555555555555555555444

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=5.7e-11  Score=73.23  Aligned_cols=41  Identities=22%  Similarity=0.403  Sum_probs=19.4

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Cccccc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCY  325 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~  325 (360)
                      |+++|++++||.|++|++.|.+...|..|+++|++ +||+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            34444444444444444444444444444444444 344443

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=7.2e-11  Score=72.76  Aligned_cols=35  Identities=26%  Similarity=0.491  Sum_probs=14.3

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG  319 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  319 (360)
                      |+++|++++||.|++|++.|.+...|..|+++|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2yto_A            3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTG   37 (46)
T ss_dssp             CCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTC
T ss_pred             cccccCCCCCEECcccCCccCCHhHHHHHHHHcCC
Confidence            33334444444444444444444444444444333

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=7.3e-11  Score=71.92  Aligned_cols=41  Identities=24%  Similarity=0.313  Sum_probs=21.5

Q ss_pred             HHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCcccc
Q psy6525         257 HMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQC  297 (360)
Q Consensus       257 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  297 (360)
                      |+++|+++++|.|++|++.|.+...|..|+++|++++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2en7_A            3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS   43 (44)
T ss_dssp             SCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCC
T ss_pred             CCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCC
Confidence            33445555555555555555555555555555555555554

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1e-10  Score=72.02  Aligned_cols=41  Identities=22%  Similarity=0.255  Sum_probs=21.4

Q ss_pred             HHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccc
Q psy6525         258 MRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCA  298 (360)
Q Consensus       258 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  298 (360)
                      +++|.++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            4 GSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            34445555555555555555555555555555555555553

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.00  E-value=1.4e-10  Score=72.24  Aligned_cols=41  Identities=20%  Similarity=0.404  Sum_probs=22.6

Q ss_pred             hcCCCccccccchhhhcCHHHHHHHHhhhcC-Cccccccccc
Q psy6525         289 HEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYICGN  329 (360)
Q Consensus       289 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~C~~  329 (360)
                      |.++++|.|++|++.|.+...|..|+++|++ +||+|++|++
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            3445555555555555555555555555554 4555555553

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=7.6e-11  Score=72.66  Aligned_cols=41  Identities=22%  Similarity=0.325  Sum_probs=26.9

Q ss_pred             hhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Cccccccc
Q psy6525         287 QRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYIC  327 (360)
Q Consensus       287 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~C  327 (360)
                      ++|.+++||.|++|++.|.+...|..|+++|++ +||+|++|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            5 SSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            456666666666666666666666666666665 46666665

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=5.4e-11  Score=73.33  Aligned_cols=43  Identities=23%  Similarity=0.278  Sum_probs=36.7

Q ss_pred             HHHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccc
Q psy6525         256 RHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCA  298 (360)
Q Consensus       256 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  298 (360)
                      +|+++|.++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            3666788888889999999999889999998888888888886

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.00  E-value=2.9e-12  Score=84.72  Aligned_cols=53  Identities=13%  Similarity=0.302  Sum_probs=43.0

Q ss_pred             HHHHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccchhhhcCHHHH
Q psy6525         255 LRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKML  310 (360)
Q Consensus       255 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L  310 (360)
                      ..|+++|.+++||.|+.|++.|.....|.   ++|++++||.|++|++.|.....+
T Consensus         3 ~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~   55 (62)
T 1vd4_A            3 ETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESA   55 (62)
T ss_dssp             CCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTC
T ss_pred             hhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCccc
Confidence            34677788888899999999888887776   778888899999999888766544

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=8.3e-11  Score=71.70  Aligned_cols=41  Identities=24%  Similarity=0.340  Sum_probs=22.6

Q ss_pred             HHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCcccc
Q psy6525         257 HMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQC  297 (360)
Q Consensus       257 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  297 (360)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS   43 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCC
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            34445555555555555555555555555555555555555

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=4.9e-11  Score=71.91  Aligned_cols=39  Identities=26%  Similarity=0.364  Sum_probs=19.4

Q ss_pred             HHhcCCCcccccccccccCChhHHHHhHhhhcCCCcccc
Q psy6525         259 RIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQC  297 (360)
Q Consensus       259 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  297 (360)
                      ++|.++++|.|+.|++.|.....|..|+++|++++||.|
T Consensus         4 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            4 GSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             cccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            344444555555555555555555555555555555444

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=6.9e-11  Score=71.26  Aligned_cols=40  Identities=28%  Similarity=0.454  Sum_probs=24.9

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Ccccc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKC  324 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C  324 (360)
                      |+++|++++||.|++|++.|.+...|..|+++|++ +||+|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            55566666666666666666666666666666655 45555

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.99  E-value=6.5e-11  Score=72.21  Aligned_cols=40  Identities=18%  Similarity=0.432  Sum_probs=19.8

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Ccccc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKC  324 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C  324 (360)
                      |+++|++++||.|++|++.|.+...|..|+++|++ +||+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2emb_A            3 SGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSS   43 (44)
T ss_dssp             CCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTC
T ss_pred             cccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCC
Confidence            44444555555555555555555555555555444 34444

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.99  E-value=7.8e-11  Score=71.84  Aligned_cols=28  Identities=21%  Similarity=0.621  Sum_probs=10.2

Q ss_pred             hcCCCccccccchhhhcCHHHHHHHHhh
Q psy6525         289 HEEPNKYQCAMCKKQYASKKMLEKHIRR  316 (360)
Q Consensus       289 h~~~~~~~C~~C~~~f~~~~~L~~H~~~  316 (360)
                      |++++||.|++|++.|.+...|..|+++
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~   34 (44)
T 2yu5_A            7 GAGENPFKCSKCDRVFTQRNYLVQHERT   34 (44)
T ss_dssp             CSCCCSEECSSSSCEESSSHHHHHHHHH
T ss_pred             cCCCCCeECCCCCchhCCHHHHHHHhHh
Confidence            3333333333333333333333333333

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=6.5e-11  Score=72.19  Aligned_cols=43  Identities=16%  Similarity=0.318  Sum_probs=37.9

Q ss_pred             HHHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccc
Q psy6525         256 RHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCA  298 (360)
Q Consensus       256 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  298 (360)
                      +|+++|.++++|.|++|++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            3667788999999999999999999999999999999999884

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=6.3e-11  Score=71.44  Aligned_cols=40  Identities=20%  Similarity=0.461  Sum_probs=19.4

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Ccccc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKC  324 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C  324 (360)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++ +||+|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            34444445555555555555555555555555444 34444

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=1.2e-10  Score=70.14  Aligned_cols=40  Identities=18%  Similarity=0.349  Sum_probs=21.9

Q ss_pred             HHHhcCCCcccccccccccCChhHHHHhHhhhcCCCcccc
Q psy6525         258 MRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQC  297 (360)
Q Consensus       258 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  297 (360)
                      +++|.++++|.|++|++.|.+...|..|+++|++++||.|
T Consensus         3 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            3 SGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            3345555555555555555555555555555555555554

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=8.4e-11  Score=72.45  Aligned_cols=33  Identities=21%  Similarity=0.500  Sum_probs=13.8

Q ss_pred             HhhhcCCCccccccchhhhcCHHHHHHHHhhhc
Q psy6525         286 MQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHE  318 (360)
Q Consensus       286 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  318 (360)
                      +++|.+++||.|++|++.|.+...|..|+++|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2emz_A            4 GSSGSGERPFKCNECGKGFGRRSHLAGHLRLHS   36 (46)
T ss_dssp             CSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHH
T ss_pred             CcCCCCCCCeECCCCCcccCCHHHHHHHHHHhC
Confidence            334444444444444444444444444444443

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=6.1e-11  Score=73.09  Aligned_cols=41  Identities=24%  Similarity=0.421  Sum_probs=21.7

Q ss_pred             HHHhcCCCcccccccccccCChhHHHHhHhhhcC-CCccccc
Q psy6525         258 MRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEE-PNKYQCA  298 (360)
Q Consensus       258 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~  298 (360)
                      +++|.++++|.|++|++.|.+...|..|+++|++ ++||.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            4 GSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             ccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            3444555555555555555555555555555555 5555554

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=6e-11  Score=73.14  Aligned_cols=43  Identities=21%  Similarity=0.313  Sum_probs=36.1

Q ss_pred             HHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCcccccc
Q psy6525         257 HMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAM  299 (360)
Q Consensus       257 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  299 (360)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|+.
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emz_A            3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPSS   45 (46)
T ss_dssp             CCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred             CCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5667888888888888888888888888888888888888863

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=8.3e-11  Score=72.48  Aligned_cols=40  Identities=25%  Similarity=0.403  Sum_probs=21.5

Q ss_pred             HHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccc
Q psy6525         259 RIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCA  298 (360)
Q Consensus       259 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  298 (360)
                      ++|.++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            5 SSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3445555555555555555555555555555555555553

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=7.7e-11  Score=72.61  Aligned_cols=41  Identities=20%  Similarity=0.357  Sum_probs=19.8

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Cccccc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCY  325 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~  325 (360)
                      |+++|++++||.|++|++.|.+...|..|+++|++ +||+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             cccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            44444444455555555555555555555444444 344443

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=1.5e-10  Score=70.56  Aligned_cols=41  Identities=17%  Similarity=0.273  Sum_probs=22.4

Q ss_pred             HHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCcccc
Q psy6525         257 HMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQC  297 (360)
Q Consensus       257 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  297 (360)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2emb_A            3 SGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSS   43 (44)
T ss_dssp             CCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTC
T ss_pred             cccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCC
Confidence            34445555555555555555555555555555555555555

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1e-10  Score=72.00  Aligned_cols=42  Identities=26%  Similarity=0.352  Sum_probs=22.5

Q ss_pred             HHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccc
Q psy6525         257 HMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCA  298 (360)
Q Consensus       257 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  298 (360)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             cccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            344455555555555555555555555555555555555553

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.97  E-value=8.4e-11  Score=70.86  Aligned_cols=38  Identities=21%  Similarity=0.271  Sum_probs=18.3

Q ss_pred             HhcCCCcccccccccccCChhHHHHhHhhhcCCCcccc
Q psy6525         260 IHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQC  297 (360)
Q Consensus       260 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  297 (360)
                      +|.++++|.|+.|++.|.+...|..|+++|++++||.|
T Consensus         5 ~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            5 SSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             cCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            34444444444444444444444444444444444444

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=5.7e-11  Score=71.63  Aligned_cols=40  Identities=18%  Similarity=0.370  Sum_probs=19.1

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Ccccc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKC  324 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C  324 (360)
                      |+++|++++||.|+.|++.|.+...|..|+++|++ +||+|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            33444444455555555555555555555444444 34443

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.2e-10  Score=70.11  Aligned_cols=39  Identities=18%  Similarity=0.269  Sum_probs=20.6

Q ss_pred             HHhcCCCcccccccccccCChhHHHHhHhhhcCCCcccc
Q psy6525         259 RIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQC  297 (360)
Q Consensus       259 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  297 (360)
                      ++|.++++|.|+.|++.|.+...|..|+++|++++||.|
T Consensus         4 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            4 GSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             cccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            344555555555555555555555555555555555544

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=1.2e-10  Score=70.93  Aligned_cols=38  Identities=21%  Similarity=0.332  Sum_probs=18.0

Q ss_pred             HhcCCCcccccccccccCChhHHHHhHhhhcCCCcccc
Q psy6525         260 IHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQC  297 (360)
Q Consensus       260 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  297 (360)
                      +|.++++|.|++|++.|.....|..|+++|++++||.|
T Consensus         6 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            6 SGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             SCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            34444444444444444444444444444444444444

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.95  E-value=1.9e-10  Score=69.29  Aligned_cols=40  Identities=18%  Similarity=0.295  Sum_probs=20.0

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Ccccc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKC  324 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C  324 (360)
                      |+++|++++||.|++|++.|.+...|..|+++|++ +||+|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            34445555555555555555555555555555544 34444

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.9e-10  Score=70.80  Aligned_cols=41  Identities=22%  Similarity=0.455  Sum_probs=20.2

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Cccccc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCY  325 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~  325 (360)
                      |+++|++++||.|++|++.|.+...|..|+++|++ +||+|+
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            34445555555555555555555555555555444 344443

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=2.7e-10  Score=69.35  Aligned_cols=40  Identities=18%  Similarity=0.308  Sum_probs=21.1

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Ccccc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKC  324 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C  324 (360)
                      |+++|.+++||.|++|++.|.+...|..|+++|++ +||+|
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            34455555555555555555555555555555554 34554

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=7.5e-11  Score=72.67  Aligned_cols=40  Identities=23%  Similarity=0.321  Sum_probs=19.8

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Ccccc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKC  324 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C  324 (360)
                      |+++|++++||.|++|++.|.+...|..|+++|++ +||+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2en3_A            3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP   43 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSC
T ss_pred             cccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            44444555555555555555555555555554443 34444

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=1e-10  Score=72.08  Aligned_cols=42  Identities=21%  Similarity=0.325  Sum_probs=21.8

Q ss_pred             HHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccc
Q psy6525         257 HMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCA  298 (360)
Q Consensus       257 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  298 (360)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             cccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            334445555555555555555555555555555555555553

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=9.8e-11  Score=71.37  Aligned_cols=40  Identities=20%  Similarity=0.226  Sum_probs=20.4

Q ss_pred             HHHhcCCCcccccccccccCChhHHHHhHhhhcCCCcccc
Q psy6525         258 MRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQC  297 (360)
Q Consensus       258 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  297 (360)
                      +++|.++++|.|++|++.|.....|..|+++|++++||.|
T Consensus         4 ~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            4 GSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            3444455555555555555555555555555555555544

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=1.1e-10  Score=71.23  Aligned_cols=40  Identities=18%  Similarity=0.351  Sum_probs=19.7

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Ccccc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKC  324 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C  324 (360)
                      |+++|++++||.|++|++.|.+...|..|+++|++ +||+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            44445555555555555555555555555554444 34444

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.91  E-value=3e-10  Score=69.92  Aligned_cols=41  Identities=20%  Similarity=0.395  Sum_probs=19.2

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC--Cccccc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG--QDYKCY  325 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~--~~~~C~  325 (360)
                      |+++|.+++||.|++|++.|.+...|..|+++|++  +||+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            34444444444444444444444444444444443  244443

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.91  E-value=3.3e-10  Score=69.74  Aligned_cols=39  Identities=21%  Similarity=0.334  Sum_probs=20.8

Q ss_pred             HhcCCCcccccccccccCChhHHHHhHhhhcCCCccccc
Q psy6525         260 IHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCA  298 (360)
Q Consensus       260 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  298 (360)
                      +|+++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            6 SGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            344555555555555555555555555555555555554

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=2e-10  Score=71.40  Aligned_cols=41  Identities=17%  Similarity=0.203  Sum_probs=21.1

Q ss_pred             HhcCCCccccc--ccccccCChhHHHHhHhhhcCCCccccccc
Q psy6525         260 IHQGLEVHECN--LCAKLFACKRSLQDHMQRHEEPNKYQCAMC  300 (360)
Q Consensus       260 ~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  300 (360)
                      +|.++++|.|.  .|++.|.....|..|+++|++++||.|++|
T Consensus         6 ~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            6 SGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             SSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34445555554  455555555555555555555555555544

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=3.9e-10  Score=68.67  Aligned_cols=32  Identities=28%  Similarity=0.525  Sum_probs=12.4

Q ss_pred             hhhcCCCccccccchhhhcCHHHHHHHHhhhc
Q psy6525         287 QRHEEPNKYQCAMCKKQYASKKMLEKHIRRHE  318 (360)
Q Consensus       287 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  318 (360)
                      ++|++++||.|++|++.|.+...|..|+++|+
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~   36 (44)
T 2epv_A            5 SSGSGEKPYECNECGKAFIWKSLLIVHERTHA   36 (44)
T ss_dssp             CCCCCCCSEECSSSCCEESSHHHHHHHHGGGS
T ss_pred             cccCCCcCeECCCCCcccCchHHHHHHHhHhc
Confidence            33333333333333333333333333333333

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=2.3e-10  Score=69.73  Aligned_cols=42  Identities=26%  Similarity=0.285  Sum_probs=37.2

Q ss_pred             HHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccc
Q psy6525         257 HMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCA  298 (360)
Q Consensus       257 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  298 (360)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~g   44 (44)
T 2epv_A            3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCCC
T ss_pred             CCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCCC
Confidence            667788899999999999999999999999999999998873

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.90  E-value=9.6e-10  Score=66.50  Aligned_cols=38  Identities=21%  Similarity=0.295  Sum_probs=21.5

Q ss_pred             hcCCCcccccccccccCChhHHHHhHhhhcCCCccccc
Q psy6525         261 HQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCA  298 (360)
Q Consensus       261 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  298 (360)
                      |+++++|.|..|++.|.....|..|+++|++++||.|+
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            5 SSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             CSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             cCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            44555555555555555555555555555555555554

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=3.8e-10  Score=70.07  Aligned_cols=43  Identities=16%  Similarity=0.288  Sum_probs=26.6

Q ss_pred             hHhhhcCCCccccc--cchhhhcCHHHHHHHHhhhcC-Cccccccc
Q psy6525         285 HMQRHEEPNKYQCA--MCKKQYASKKMLEKHIRRHEG-QDYKCYIC  327 (360)
Q Consensus       285 H~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~-~~~~C~~C  327 (360)
                      |.++|++++||.|.  .|++.|.+...|..|+++|++ +||+|.+|
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34456666666665  566666666666666666665 46666655

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.89  E-value=5.3e-10  Score=68.76  Aligned_cols=39  Identities=18%  Similarity=0.261  Sum_probs=19.7

Q ss_pred             hhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Cccccc
Q psy6525         287 QRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCY  325 (360)
Q Consensus       287 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~  325 (360)
                      ++|++++||.|++|++.|.+...|..|+++|++ +||+|+
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            5 SSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            344455555555555555555555555555544 345543

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.88  E-value=7.8e-10  Score=66.92  Aligned_cols=38  Identities=11%  Similarity=0.302  Sum_probs=19.4

Q ss_pred             hhcCCCccccccchhhhcCHHHHHHHHhhhcC-Cccccc
Q psy6525         288 RHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCY  325 (360)
Q Consensus       288 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~  325 (360)
                      +|++++||.|+.|++.|.+...|..|+++|++ +||+|+
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            4 GSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             CcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            34455555555555555555555555555544 345543

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=5.5e-10  Score=68.33  Aligned_cols=37  Identities=27%  Similarity=0.431  Sum_probs=15.9

Q ss_pred             hcCCCcccccccccccCChhHHHHhHhhhcCCCcccc
Q psy6525         261 HQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQC  297 (360)
Q Consensus       261 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  297 (360)
                      |.++++|.|.+|++.|.....|..|+++|++++||.|
T Consensus         7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (45)
T 2epu_A            7 GTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS   43 (45)
T ss_dssp             CCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCS
T ss_pred             CCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCC
Confidence            3344444444444444444444444444444444444

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.85  E-value=6.6e-10  Score=66.44  Aligned_cols=37  Identities=32%  Similarity=0.414  Sum_probs=20.9

Q ss_pred             hcCCCcccccccccccCChhHHHHhHhhhcCCCcccc
Q psy6525         261 HQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQC  297 (360)
Q Consensus       261 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  297 (360)
                      |.++++|.|++|++.|.....|..|+++|++++||.|
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            5 SSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             CCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             cCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            4455555555555555555555555555555555554

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1.4e-09  Score=66.49  Aligned_cols=42  Identities=21%  Similarity=0.343  Sum_probs=35.8

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-Ccccccc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYI  326 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~  326 (360)
                      +.++|++++||.|++|++.|.+...|..|+++|++ +||.|++
T Consensus         3 ~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A            3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             CCCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred             CCCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence            34678889999999999999999999999999887 6898863

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.82  E-value=7.4e-11  Score=80.98  Aligned_cols=64  Identities=17%  Similarity=0.221  Sum_probs=46.1

Q ss_pred             HHHHHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccchhhhcCHHHHHHHHhhhcCC
Q psy6525         254 YLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEGQ  320 (360)
Q Consensus       254 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~  320 (360)
                      |..|+++|.+.+++.|..|++.|. ...|..|+ .|.+++||.|+.|++.|. ...|..|+++|.+.
T Consensus         5 L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~   68 (75)
T 2d9k_A            5 SSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGRE   68 (75)
T ss_dssp             CSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTB
T ss_pred             HHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccCC
Confidence            445666667777777777777774 77777777 777777777777777766 37777777777653

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.81  E-value=1.5e-09  Score=64.85  Aligned_cols=37  Identities=27%  Similarity=0.443  Sum_probs=19.6

Q ss_pred             hhcCCCccccccchhhhcCHHHHHHHHhhhcC-Ccccc
Q psy6525         288 RHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKC  324 (360)
Q Consensus       288 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C  324 (360)
                      +|++++||.|++|++.|.+...|..|+++|++ +||+|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            4 GSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             ccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            34555555555555555555555555555554 34544

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.78  E-value=8.1e-11  Score=83.37  Aligned_cols=58  Identities=19%  Similarity=0.284  Sum_probs=46.1

Q ss_pred             HhhhcCCCccccccchhhhcCHHHHHHHHhhhcC-CcccccccccccCChHHHHHHHHHhCCC
Q psy6525         286 MQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYICGNRYATQKYLEEHIRLHQGH  347 (360)
Q Consensus       286 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~C~~~f~~~~~l~~H~~~h~g~  347 (360)
                      .++|++++||.|++|++.|.+...|..|+++|++ +||+|..|.    ....|..|.++|.|.
T Consensus        17 ~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~----~~~~~~~~~~~~~~~   75 (88)
T 1x6f_A           17 NGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQE----RRKQLLSKQKYADGA   75 (88)
T ss_dssp             CCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCS----CCCCCCCCCCCCCCS
T ss_pred             ccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhh----hHHHHHhhhcccccc
Confidence            4568888899999999999999999999988887 688887654    455666788888774

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.70  E-value=5.9e-09  Score=60.55  Aligned_cols=34  Identities=21%  Similarity=0.490  Sum_probs=17.7

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHE  318 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  318 (360)
                      |+++|++++||.|+.|++.|.+...|..|+++|+
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   35 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhc
Confidence            4445555555555555555555555555555544

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.70  E-value=5.6e-09  Score=60.66  Aligned_cols=35  Identities=20%  Similarity=0.394  Sum_probs=24.9

Q ss_pred             HHhhhcC-CcccccccccccCChHHHHHHHHHhCCC
Q psy6525         313 HIRRHEG-QDYKCYICGNRYATQKYLEEHIRLHQGH  347 (360)
Q Consensus       313 H~~~h~~-~~~~C~~C~~~f~~~~~l~~H~~~h~g~  347 (360)
                      |+++|++ +||+|++|++.|.+...|..|+++|+|+
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            5566666 5777777777777777777777777664

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.68  E-value=9.4e-09  Score=60.51  Aligned_cols=37  Identities=19%  Similarity=0.328  Sum_probs=22.4

Q ss_pred             hcCCCcccccccccccCChhHHHHhHhhhcCCCcccc
Q psy6525         261 HQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQC  297 (360)
Q Consensus       261 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  297 (360)
                      |.++++|.|..|++.|...+.|..|+++|++++||.+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            3455666666666666666666666666666666554

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.60  E-value=3e-08  Score=55.91  Aligned_cols=31  Identities=26%  Similarity=0.468  Sum_probs=23.1

Q ss_pred             CcccccccccccCChHHHHHHHHHhCCC-Ccc
Q psy6525         320 QDYKCYICGNRYATQKYLEEHIRLHQGH-TYM  350 (360)
Q Consensus       320 ~~~~C~~C~~~f~~~~~l~~H~~~h~g~-~~~  350 (360)
                      +||.|++||+.|.+.+.|..|+++|+|+ ||.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            3677777777777777777777777776 654

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.60  E-value=4.3e-10  Score=79.57  Aligned_cols=56  Identities=16%  Similarity=0.264  Sum_probs=35.5

Q ss_pred             HhcCCCcccccccccccCChhHHHHhHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC
Q psy6525         260 IHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG  319 (360)
Q Consensus       260 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  319 (360)
                      +|+++++|.|+.|++.|.....|..|+++|++++||.|..|.    ....|..|.+.|.+
T Consensus        19 ~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~----~~~~~~~~~~~~~~   74 (88)
T 1x6f_A           19 PRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQE----RRKQLLSKQKYADG   74 (88)
T ss_dssp             SCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCS----CCCCCCCCCCCCCC
T ss_pred             ccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhh----hHHHHHhhhccccc
Confidence            456666677777777777777777777767666667665543    34455555565554

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.59  E-value=2.8e-08  Score=64.98  Aligned_cols=37  Identities=19%  Similarity=0.212  Sum_probs=25.7

Q ss_pred             cCCCcccccc--cccccCChhHHHHhH-hhhcCCCccccc
Q psy6525         262 QGLEVHECNL--CAKLFACKRSLQDHM-QRHEEPNKYQCA  298 (360)
Q Consensus       262 ~~~~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~~~~~C~  298 (360)
                      +|++||.|.+  |+++|...+.|..|+ ++|++++||.|.
T Consensus        23 sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~   62 (73)
T 1x3c_A           23 SPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSA   62 (73)
T ss_dssp             CSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCC
T ss_pred             cCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccc
Confidence            4667777754  777777777777776 467777777664

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.58  E-value=2.2e-08  Score=58.87  Aligned_cols=32  Identities=19%  Similarity=0.584  Sum_probs=18.5

Q ss_pred             CcccccccccccCChHHHHHHHHHhCCC-CccC
Q psy6525         320 QDYKCYICGNRYATQKYLEEHIRLHQGH-TYMC  351 (360)
Q Consensus       320 ~~~~C~~C~~~f~~~~~l~~H~~~h~g~-~~~C  351 (360)
                      +||+|.+|++.|.+.+.|..|+++|+|+ ||.+
T Consensus         5 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            5 RSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            4555666666666666666666666555 5544

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.57  E-value=1.1e-08  Score=59.34  Aligned_cols=32  Identities=19%  Similarity=0.668  Sum_probs=16.8

Q ss_pred             hhcCCCccccccchhhhcCHHHHHHHHhhhcC
Q psy6525         288 RHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG  319 (360)
Q Consensus       288 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  319 (360)
                      +|++++||.|+.|++.|.+...|..|+++|++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~   34 (37)
T 2elo_A            3 SGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHP   34 (37)
T ss_dssp             CCCCCCCCEETTTTEECSSHHHHHHHHHHHCS
T ss_pred             CCCCCCCcCCCCCCCccCCHHHHHHHHHHHcC
Confidence            34455555555555555555555555555544

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.53  E-value=3.3e-08  Score=56.45  Aligned_cols=30  Identities=37%  Similarity=0.722  Sum_probs=13.9

Q ss_pred             cCCCccccccchhhhcCHHHHHHHHhhhcC
Q psy6525         290 EEPNKYQCAMCKKQYASKKMLEKHIRRHEG  319 (360)
Q Consensus       290 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  319 (360)
                      ++++||.|+.|++.|.+...|..|+++|++
T Consensus         3 ~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~   32 (35)
T 2elx_A            3 SGSSGYVCALCLKKFVSSIRLRSHIREVHG   32 (35)
T ss_dssp             CCCCSEECSSSCCEESSHHHHHHHHHHTSC
T ss_pred             CCCCCeECCCCcchhCCHHHHHHHHHHHcC
Confidence            344444444444444444444444444443

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.53  E-value=2.6e-08  Score=57.74  Aligned_cols=28  Identities=18%  Similarity=0.705  Sum_probs=15.1

Q ss_pred             CcccccccccccCChHHHHHHHHHhCCC
Q psy6525         320 QDYKCYICGNRYATQKYLEEHIRLHQGH  347 (360)
Q Consensus       320 ~~~~C~~C~~~f~~~~~l~~H~~~h~g~  347 (360)
                      +||+|.+|++.|.+...|..|+++|+|+
T Consensus         8 k~~~C~~C~k~f~~~~~l~~H~~~h~~~   35 (37)
T 2elo_A            8 RSYSCPVCEKSFSEDRLIKSHIKTNHPE   35 (37)
T ss_dssp             CCCEETTTTEECSSHHHHHHHHHHHCSS
T ss_pred             CCcCCCCCCCccCCHHHHHHHHHHHcCC
Confidence            3555555555555555555555555543

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.53  E-value=5.4e-08  Score=54.84  Aligned_cols=30  Identities=27%  Similarity=0.411  Sum_probs=16.6

Q ss_pred             cccccccccccCChhHHHHhHhhhcCCCcc
Q psy6525         266 VHECNLCAKLFACKRSLQDHMQRHEEPNKY  295 (360)
Q Consensus       266 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  295 (360)
                      ||.|+.|++.|.....|..|+++|++++||
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   31 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHITLHELLGEE   31 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTTTCCC
T ss_pred             cccCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            455555555555555555555555555554

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.49  E-value=5.5e-08  Score=56.58  Aligned_cols=20  Identities=20%  Similarity=0.521  Sum_probs=8.0

Q ss_pred             cccccCChHHHHHHHHHhCC
Q psy6525         327 CGNRYATQKYLEEHIRLHQG  346 (360)
Q Consensus       327 C~~~f~~~~~l~~H~~~h~g  346 (360)
                      |++.|.+++.|..|+++|+|
T Consensus        17 C~k~F~~~~~L~~H~r~Htg   36 (38)
T 2eln_A           17 CDYSTPDKYKLQAHLKVHTA   36 (38)
T ss_dssp             CCCEESCHHHHHHHHHHHSC
T ss_pred             CCCccCCHHHHHHHHHhcCC
Confidence            44444444444444444333

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.49  E-value=6.8e-08  Score=55.10  Aligned_cols=31  Identities=16%  Similarity=0.529  Sum_probs=14.5

Q ss_pred             hcCCCccccccchhhhcCHHHHHHHHhhhcC
Q psy6525         289 HEEPNKYQCAMCKKQYASKKMLEKHIRRHEG  319 (360)
Q Consensus       289 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  319 (360)
                      |.+++||.|++|++.|.+...|..|+++|++
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   32 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTS
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCC
Confidence            3444444444444444444444444444443

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.46  E-value=7.1e-08  Score=54.96  Aligned_cols=27  Identities=30%  Similarity=0.672  Sum_probs=13.5

Q ss_pred             CcccccccccccCChHHHHHHHHHhCC
Q psy6525         320 QDYKCYICGNRYATQKYLEEHIRLHQG  346 (360)
Q Consensus       320 ~~~~C~~C~~~f~~~~~l~~H~~~h~g  346 (360)
                      ++|.|.+|++.|.+.+.|..|+++|+|
T Consensus         6 k~~~C~~C~k~f~~~~~L~~H~~~h~~   32 (35)
T 2elx_A            6 SGYVCALCLKKFVSSIRLRSHIREVHG   32 (35)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHTSC
T ss_pred             CCeECCCCcchhCCHHHHHHHHHHHcC
Confidence            345555555555555555555555544

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.45  E-value=1.4e-07  Score=61.76  Aligned_cols=33  Identities=21%  Similarity=0.459  Sum_probs=16.9

Q ss_pred             Ccccccc--cccccCChHHHHHHH-HHhCCC-CccCC
Q psy6525         320 QDYKCYI--CGNRYATQKYLEEHI-RLHQGH-TYMCN  352 (360)
Q Consensus       320 ~~~~C~~--C~~~f~~~~~l~~H~-~~h~g~-~~~C~  352 (360)
                      +||+|.+  |++.|.+.++|..|+ ++|+|+ ||.|.
T Consensus        26 KPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~   62 (73)
T 1x3c_A           26 RPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSA   62 (73)
T ss_dssp             CSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCC
T ss_pred             CCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccc
Confidence            3555543  555555555555554 345554 55544

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.45  E-value=4.5e-08  Score=56.75  Aligned_cols=31  Identities=26%  Similarity=0.585  Sum_probs=14.5

Q ss_pred             hhcCCCccccccchhhhcCHHHHHHH-Hhhhc
Q psy6525         288 RHEEPNKYQCAMCKKQYASKKMLEKH-IRRHE  318 (360)
Q Consensus       288 ~h~~~~~~~C~~C~~~f~~~~~L~~H-~~~h~  318 (360)
                      +|++++||.|+.|++.|.+...|..| +++|+
T Consensus         3 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~   34 (37)
T 2elm_A            3 SGSSGHLYYCSQCHYSSITKNCLKRHVIQKHS   34 (37)
T ss_dssp             SSSSSCEEECSSSSCEEECHHHHHHHHHHHTC
T ss_pred             ccCCCcCeECCCCCcccCCHHHHHHHHHHHcc
Confidence            34444444444444444444444444 44443

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.42  E-value=1.3e-07  Score=55.03  Aligned_cols=31  Identities=19%  Similarity=0.379  Sum_probs=18.4

Q ss_pred             hcCCCcccccc--chhhhcCHHHHHHHHhhhcC
Q psy6525         289 HEEPNKYQCAM--CKKQYASKKMLEKHIRRHEG  319 (360)
Q Consensus       289 h~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~  319 (360)
                      +++++||+|++  |+++|.+.+.|..|+++|++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg   36 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTA   36 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            44556666654  66666666666666666654

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.42  E-value=6.8e-08  Score=55.31  Aligned_cols=24  Identities=29%  Similarity=0.693  Sum_probs=11.6

Q ss_pred             CCCccccccchhhhcCHHHHHHHH
Q psy6525         291 EPNKYQCAMCKKQYASKKMLEKHI  314 (360)
Q Consensus       291 ~~~~~~C~~C~~~f~~~~~L~~H~  314 (360)
                      +++||.|+.|+++|.+.+.|..|+
T Consensus         5 gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            5 KPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CccCeECCCCCCccCCHhHccCcC
Confidence            444444444444444444444444

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.42  E-value=9.7e-08  Score=54.43  Aligned_cols=33  Identities=21%  Similarity=0.481  Sum_probs=16.3

Q ss_pred             hcCCCcccccccccccCChhHHHHhHhhhcCCC
Q psy6525         261 HQGLEVHECNLCAKLFACKRSLQDHMQRHEEPN  293 (360)
Q Consensus       261 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  293 (360)
                      |.++++|.|..|++.|.....|..|+++|++++
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~   34 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCC
Confidence            344445555555555555555555555554443

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.41  E-value=7.1e-08  Score=55.91  Aligned_cols=33  Identities=24%  Similarity=0.394  Sum_probs=29.9

Q ss_pred             hhhcC-CcccccccccccCChHHHHHH-HHHhCCC
Q psy6525         315 RRHEG-QDYKCYICGNRYATQKYLEEH-IRLHQGH  347 (360)
Q Consensus       315 ~~h~~-~~~~C~~C~~~f~~~~~l~~H-~~~h~g~  347 (360)
                      ++|++ +||+|+.|++.|.+.+.|..| +++|+|+
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            46777 799999999999999999999 9999885

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.40  E-value=1.2e-07  Score=55.14  Aligned_cols=34  Identities=24%  Similarity=0.399  Sum_probs=19.2

Q ss_pred             cCCCccccc--ccccccCChhHHHHhHhhhcCCCcc
Q psy6525         262 QGLEVHECN--LCAKLFACKRSLQDHMQRHEEPNKY  295 (360)
Q Consensus       262 ~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~  295 (360)
                      +++++|.|.  .|++.|.....|..|+++|++++||
T Consensus         2 ~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            2 SDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             TTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            445555555  3555555555555555555555554

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.36  E-value=1.5e-07  Score=54.03  Aligned_cols=28  Identities=29%  Similarity=0.673  Sum_probs=11.4

Q ss_pred             cCCCccccccchhhhcCHHHHHHHHhhh
Q psy6525         290 EEPNKYQCAMCKKQYASKKMLEKHIRRH  317 (360)
Q Consensus       290 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h  317 (360)
                      .+++||.|++|++.|.+...|..|+++|
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H   32 (36)
T 2elq_A            5 SSGKPFKCSLCEYATRSKSNLKAHMNRH   32 (36)
T ss_dssp             CCCCSEECSSSSCEESCHHHHHHHHHHS
T ss_pred             CCCCCccCCCCCchhCCHHHHHHHHHHh
Confidence            3334444444444444444444444333

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.36  E-value=1.3e-07  Score=54.36  Aligned_cols=28  Identities=18%  Similarity=0.568  Sum_probs=11.6

Q ss_pred             cCCCccccccchhhhcCHHHHHHHHhhh
Q psy6525         290 EEPNKYQCAMCKKQYASKKMLEKHIRRH  317 (360)
Q Consensus       290 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h  317 (360)
                      .+++||.|++|++.|.+...|..|+++|
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H   32 (36)
T 2elv_A            5 SSGLLYDCHICERKFKNELDRDRHMLVH   32 (36)
T ss_dssp             CCCCCEECSSSCCEESSHHHHHHHHTTT
T ss_pred             CCCCCeECCCCCCccCCHHHHHHHHHHh
Confidence            3334444444444444444444444443

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.36  E-value=2.8e-07  Score=60.74  Aligned_cols=40  Identities=18%  Similarity=0.327  Sum_probs=22.1

Q ss_pred             hcCCCccccccchhhhcCHHHHHHHHhhhcCCcccccccc
Q psy6525         289 HEEPNKYQCAMCKKQYASKKMLEKHIRRHEGQDYKCYICG  328 (360)
Q Consensus       289 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~C~~C~  328 (360)
                      +.+++||.|..|++.|.+...|..|+++|++....+.+++
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~~~~~~~~   47 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEAQHGVTSLQLGYID   47 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTSCCCCSCC
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhhhhCCCcccccccc
Confidence            3445556666666666666666666666555444444443

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.36  E-value=1.7e-07  Score=53.75  Aligned_cols=28  Identities=32%  Similarity=0.632  Sum_probs=11.2

Q ss_pred             cCCCccccccchhhhcCHHHHHHHHhhh
Q psy6525         290 EEPNKYQCAMCKKQYASKKMLEKHIRRH  317 (360)
Q Consensus       290 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h  317 (360)
                      .+++||.|++|++.|.....|..|+++|
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H   32 (36)
T 2elt_A            5 SSGKPYKCPQCSYASAIKANLNVHLRKH   32 (36)
T ss_dssp             CCCCSEECSSSSCEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCcccCCHHHHHHHHHHc
Confidence            3333444444444444444444444333

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.35  E-value=1.1e-07  Score=55.00  Aligned_cols=27  Identities=22%  Similarity=0.532  Sum_probs=10.3

Q ss_pred             CCCccccccchhhhcCH-HHHHHHHhhh
Q psy6525         291 EPNKYQCAMCKKQYASK-KMLEKHIRRH  317 (360)
Q Consensus       291 ~~~~~~C~~C~~~f~~~-~~L~~H~~~h  317 (360)
                      +++||.|+.|++.|.+. ..|..|+++|
T Consensus         6 ~~k~~~C~~C~k~f~~~~~~L~~H~~~H   33 (37)
T 2elp_A            6 SGRAMKCPYCDFYFMKNGSDLQRHIWAH   33 (37)
T ss_dssp             CCCCEECSSSSCEECSSCHHHHHHHHHH
T ss_pred             CCCCeECCCCChhhccCHHHHHHHHHhc
Confidence            33333333333333333 3333333333

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.33  E-value=2.8e-07  Score=52.80  Aligned_cols=34  Identities=21%  Similarity=0.314  Sum_probs=27.1

Q ss_pred             HhcCCCcccccccccccCChhHHHHhHhhhcCCC
Q psy6525         260 IHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPN  293 (360)
Q Consensus       260 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  293 (360)
                      +|.++++|.|++|++.|.....|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            3667788888888888888888888888887653

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.32  E-value=2e-07  Score=53.35  Aligned_cols=32  Identities=22%  Similarity=0.420  Sum_probs=26.4

Q ss_pred             hcCCCcccccccccccCChhHHHHhHhhhcCCCcccccc
Q psy6525         261 HQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAM  299 (360)
Q Consensus       261 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  299 (360)
                      +.+++||.|+.|+++|.++++|.+|+       ||.|..
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~-------py~C~~   34 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ-------AYYCSH   34 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH-------HHTSTT
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC-------CeECcC
Confidence            45788999999999999999999988       677754

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.32  E-value=2.7e-07  Score=52.86  Aligned_cols=25  Identities=28%  Similarity=0.671  Sum_probs=10.0

Q ss_pred             cccccccccccCChHHHHHHHHHhC
Q psy6525         321 DYKCYICGNRYATQKYLEEHIRLHQ  345 (360)
Q Consensus       321 ~~~C~~C~~~f~~~~~l~~H~~~h~  345 (360)
                      +|.|++|++.|.+...|..|+++|+
T Consensus         9 ~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elr_A            9 THLCDMCGKKFKSKGTLKSHKLLHT   33 (36)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHHHS
T ss_pred             CeecCcCCCCcCchHHHHHHHHHhc
Confidence            3334444444444444444443333

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.31  E-value=3e-07  Score=52.71  Aligned_cols=33  Identities=27%  Similarity=0.464  Sum_probs=27.1

Q ss_pred             HhcCCCcccccccccccCChhHHHHhHhhhcCC
Q psy6525         260 IHQGLEVHECNLCAKLFACKRSLQDHMQRHEEP  292 (360)
Q Consensus       260 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  292 (360)
                      .|.++++|.|+.|++.|.....|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            367788888888888888888888888888765

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.31  E-value=2.7e-07  Score=48.95  Aligned_cols=27  Identities=30%  Similarity=0.733  Sum_probs=18.8

Q ss_pred             cccccccccccCChHHHHHHHHHhCCC
Q psy6525         321 DYKCYICGNRYATQKYLEEHIRLHQGH  347 (360)
Q Consensus       321 ~~~C~~C~~~f~~~~~l~~H~~~h~g~  347 (360)
                      ||+|.+|++.|.+...|..|+++|+|+
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            467777777777777777777777663

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.31  E-value=1.4e-07  Score=54.58  Aligned_cols=34  Identities=24%  Similarity=0.353  Sum_probs=28.3

Q ss_pred             HhcCCCcccccccccccCCh-hHHHHhHhhhcCCC
Q psy6525         260 IHQGLEVHECNLCAKLFACK-RSLQDHMQRHEEPN  293 (360)
Q Consensus       260 ~h~~~~~~~C~~C~~~f~~~-~~l~~H~~~h~~~~  293 (360)
                      +|.++++|.|+.|++.|... ..|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            46788888999999999888 88989988887753

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.31  E-value=2.7e-07  Score=52.90  Aligned_cols=34  Identities=18%  Similarity=0.327  Sum_probs=28.2

Q ss_pred             HhcCCCcccccccccccCChhHHHHhHhhhcCCC
Q psy6525         260 IHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPN  293 (360)
Q Consensus       260 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  293 (360)
                      .|.++++|.|..|++.|.....|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            3677888999999999999999999988887753

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.31  E-value=6.3e-07  Score=59.05  Aligned_cols=36  Identities=17%  Similarity=0.238  Sum_probs=32.1

Q ss_pred             CcccccccccccCChHHHHHHHHHhCCCCccCCCcc
Q psy6525         320 QDYKCYICGNRYATQKYLEEHIRLHQGHTYMCNAKF  355 (360)
Q Consensus       320 ~~~~C~~C~~~f~~~~~l~~H~~~h~g~~~~C~~c~  355 (360)
                      +||+|.+|++.|.+...|..|+++|+|....+.++.
T Consensus        12 kpy~C~~CgK~F~~~s~L~~H~r~Htg~~~~~~~~~   47 (66)
T 2epp_A           12 GILPCGLCGKVFTDANRLRQHEAQHGVTSLQLGYID   47 (66)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHTTTSCCCCSCC
T ss_pred             cCcCCCCCCCccCCHHHHHhhhhhhCCCcccccccc
Confidence            699999999999999999999999999866666554

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.30  E-value=4.2e-07  Score=52.01  Aligned_cols=31  Identities=29%  Similarity=0.482  Sum_probs=16.3

Q ss_pred             hcCCCccccccchhhhcCHHHHHHHHhhhcC
Q psy6525         289 HEEPNKYQCAMCKKQYASKKMLEKHIRRHEG  319 (360)
Q Consensus       289 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  319 (360)
                      |.+++||.|++|++.|.+...|..|+++|++
T Consensus         4 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elr_A            4 GSSGKTHLCDMCGKKFKSKGTLKSHKLLHTA   34 (36)
T ss_dssp             CCCCSSCBCTTTCCBCSSHHHHHHHHHHHSS
T ss_pred             CCCCCCeecCcCCCCcCchHHHHHHHHHhcC
Confidence            4445555555555555555555555555543

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.30  E-value=4.6e-07  Score=48.89  Aligned_cols=27  Identities=30%  Similarity=0.682  Sum_probs=19.2

Q ss_pred             cccccccccccCChHHHHHHHHHhCCC
Q psy6525         321 DYKCYICGNRYATQKYLEEHIRLHQGH  347 (360)
Q Consensus       321 ~~~C~~C~~~f~~~~~l~~H~~~h~g~  347 (360)
                      ||.|++|++.|.+...|..|+++|+|+
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            567777777777777777777777664

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.29  E-value=2.3e-07  Score=57.24  Aligned_cols=27  Identities=26%  Similarity=0.656  Sum_probs=11.5

Q ss_pred             hcCCCccccccchhhhcCHHHHHHHHh
Q psy6525         289 HEEPNKYQCAMCKKQYASKKMLEKHIR  315 (360)
Q Consensus       289 h~~~~~~~C~~C~~~f~~~~~L~~H~~  315 (360)
                      |++++||.|.+|++.|.+...|..|++
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~   28 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYA   28 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHH
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhh
Confidence            334444444444444444444444444

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.28  E-value=3.8e-07  Score=52.27  Aligned_cols=25  Identities=24%  Similarity=0.679  Sum_probs=10.2

Q ss_pred             cccccccccccCChHHHHHHHHHhC
Q psy6525         321 DYKCYICGNRYATQKYLEEHIRLHQ  345 (360)
Q Consensus       321 ~~~C~~C~~~f~~~~~l~~H~~~h~  345 (360)
                      ||+|++|++.|.....|..|+++|+
T Consensus         9 ~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2els_A            9 IFTCEYCNKVFKFKHSLQAHLRIHT   33 (36)
T ss_dssp             CEECTTTCCEESSHHHHHHHHHHHC
T ss_pred             CEECCCCCceeCCHHHHHHHHHHhC
Confidence            3444444444444444444444443

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.27  E-value=3.4e-07  Score=53.19  Aligned_cols=30  Identities=20%  Similarity=0.562  Sum_probs=14.1

Q ss_pred             cCCCccccc--cchhhhcCHHHHHHHHhhhcC
Q psy6525         290 EEPNKYQCA--MCKKQYASKKMLEKHIRRHEG  319 (360)
Q Consensus       290 ~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~  319 (360)
                      ++++||.|+  .|++.|.+.+.|..|+++|++
T Consensus         2 ~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~   33 (38)
T 1bhi_A            2 SDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEM   33 (38)
T ss_dssp             TTCCCEECCCTTTCCEESSHHHHHHHHHHHHT
T ss_pred             CCCcceECCCCCCCcccCCHHHHHHHHHHhCC
Confidence            344445554  244444444444444444443

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.26  E-value=3.7e-07  Score=49.32  Aligned_cols=27  Identities=30%  Similarity=0.625  Sum_probs=19.0

Q ss_pred             cccccccccccCChHHHHHHHHHhCCC
Q psy6525         321 DYKCYICGNRYATQKYLEEHIRLHQGH  347 (360)
Q Consensus       321 ~~~C~~C~~~f~~~~~l~~H~~~h~g~  347 (360)
                      ||.|+.|++.|.+...|..|+++|+|+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            567777777777777777777777664

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.25  E-value=5.6e-07  Score=51.51  Aligned_cols=31  Identities=26%  Similarity=0.576  Sum_probs=16.8

Q ss_pred             hcCCCccccccchhhhcCHHHHHHHHhhhcC
Q psy6525         289 HEEPNKYQCAMCKKQYASKKMLEKHIRRHEG  319 (360)
Q Consensus       289 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  319 (360)
                      |.+++||.|++|++.|.....|..|+++|++
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHLRIHTN   34 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHHHHHCC
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHHHHhCC
Confidence            3445555555555555555555555555544

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.23  E-value=3.9e-07  Score=56.16  Aligned_cols=35  Identities=17%  Similarity=0.337  Sum_probs=27.6

Q ss_pred             HhcCCCcccccccccccCChhHHHHhHh-hhcCCCc
Q psy6525         260 IHQGLEVHECNLCAKLFACKRSLQDHMQ-RHEEPNK  294 (360)
Q Consensus       260 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~  294 (360)
                      +|+++++|.|.+|++.|.....|..|++ +|+++.+
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            4778889999999999999999999998 8887643

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.23  E-value=4.4e-07  Score=48.61  Aligned_cols=27  Identities=37%  Similarity=0.999  Sum_probs=15.8

Q ss_pred             CcccccccccccCChHHHHHHHHHhCC
Q psy6525         320 QDYKCYICGNRYATQKYLEEHIRLHQG  346 (360)
Q Consensus       320 ~~~~C~~C~~~f~~~~~l~~H~~~h~g  346 (360)
                      +||.|++|++.|.+...|..|+++|+|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            355566666666666666666655554

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.21  E-value=5.6e-07  Score=48.52  Aligned_cols=27  Identities=37%  Similarity=0.875  Sum_probs=18.6

Q ss_pred             cccccccccccCChHHHHHHHHHhCCC
Q psy6525         321 DYKCYICGNRYATQKYLEEHIRLHQGH  347 (360)
Q Consensus       321 ~~~C~~C~~~f~~~~~l~~H~~~h~g~  347 (360)
                      ||.|++|++.|.....|..|+++|+|+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcCC
Confidence            566777777777777777777776654

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.21  E-value=4.3e-08  Score=54.80  Aligned_cols=27  Identities=22%  Similarity=0.458  Sum_probs=13.7

Q ss_pred             cccccccccccCChHHHHHHHHHhCCC
Q psy6525         321 DYKCYICGNRYATQKYLEEHIRLHQGH  347 (360)
Q Consensus       321 ~~~C~~C~~~f~~~~~l~~H~~~h~g~  347 (360)
                      ||+|.+|++.|.+.+.|..|+++|+|+
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~~~H~~~   28 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHIKTAFIV   28 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSSTTSSSSS
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHccC
Confidence            445555555555555555555555544

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.21  E-value=7.2e-07  Score=48.45  Aligned_cols=28  Identities=21%  Similarity=0.606  Sum_probs=17.7

Q ss_pred             CcccccccccccCChHHHHHHHHHhCCC
Q psy6525         320 QDYKCYICGNRYATQKYLEEHIRLHQGH  347 (360)
Q Consensus       320 ~~~~C~~C~~~f~~~~~l~~H~~~h~g~  347 (360)
                      +||.|..|++.|.....|..|+++|+|+
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            3566666666666666666666666653

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.20  E-value=7.1e-08  Score=53.88  Aligned_cols=30  Identities=20%  Similarity=0.333  Sum_probs=15.4

Q ss_pred             cccccccccccCChhHHHHhHhhhcCCCcc
Q psy6525         266 VHECNLCAKLFACKRSLQDHMQRHEEPNKY  295 (360)
Q Consensus       266 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  295 (360)
                      ||.|+.|++.|...+.|..|+++|++++||
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            445555555555555555555555555443

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.19  E-value=6.5e-07  Score=48.20  Aligned_cols=28  Identities=21%  Similarity=0.617  Sum_probs=20.6

Q ss_pred             CcccccccccccCChHHHHHHHHHhCCC
Q psy6525         320 QDYKCYICGNRYATQKYLEEHIRLHQGH  347 (360)
Q Consensus       320 ~~~~C~~C~~~f~~~~~l~~H~~~h~g~  347 (360)
                      +||.|+.|++.|.....|..|+++|+|+
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            3677777777777777777777777664

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.18  E-value=8.7e-07  Score=48.74  Aligned_cols=27  Identities=33%  Similarity=0.807  Sum_probs=18.5

Q ss_pred             ccccc--ccccccCChHHHHHHHHHhCCC
Q psy6525         321 DYKCY--ICGNRYATQKYLEEHIRLHQGH  347 (360)
Q Consensus       321 ~~~C~--~C~~~f~~~~~l~~H~~~h~g~  347 (360)
                      ||.|+  .||+.|.+.+.|..|+++|+|+
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            56676  6777777777777777777664

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.18  E-value=6.2e-07  Score=48.00  Aligned_cols=26  Identities=35%  Similarity=0.824  Sum_probs=16.6

Q ss_pred             CccccccchhhhcCHHHHHHHHhhhc
Q psy6525         293 NKYQCAMCKKQYASKKMLEKHIRRHE  318 (360)
Q Consensus       293 ~~~~C~~C~~~f~~~~~L~~H~~~h~  318 (360)
                      +||.|+.|++.|.+...|..|+++|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhcC
Confidence            45666666666666666666666654

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.18  E-value=8.5e-07  Score=47.01  Aligned_cols=24  Identities=25%  Similarity=0.654  Sum_probs=13.8

Q ss_pred             cccccccccccCChHHHHHHHHHh
Q psy6525         321 DYKCYICGNRYATQKYLEEHIRLH  344 (360)
Q Consensus       321 ~~~C~~C~~~f~~~~~l~~H~~~h  344 (360)
                      ||.|+.||+.|.+.+.|..|+++|
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            3 PFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHHC
T ss_pred             CccCCCcChhhCCHHHHHHHHHHc
Confidence            455555555555555555555554

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.47  E-value=2.3e-07  Score=50.26  Aligned_cols=27  Identities=30%  Similarity=0.762  Sum_probs=16.8

Q ss_pred             cccccccccccCChHHHHHHHHHhCCC
Q psy6525         321 DYKCYICGNRYATQKYLEEHIRLHQGH  347 (360)
Q Consensus       321 ~~~C~~C~~~f~~~~~l~~H~~~h~g~  347 (360)
                      ||+|++|++.|.+...|..|+++|+|+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            566666666666666666666666553

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.17  E-value=8.4e-07  Score=51.19  Aligned_cols=31  Identities=29%  Similarity=0.623  Sum_probs=16.2

Q ss_pred             hcCCCcccccc--chhhhcCHHHHHHHHhhhcC
Q psy6525         289 HEEPNKYQCAM--CKKQYASKKMLEKHIRRHEG  319 (360)
Q Consensus       289 h~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~  319 (360)
                      |++++||.|.+  |++.|.+.+.|..|+++|++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~   35 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTG   35 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            34455555553  55555555555555555544

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.17  E-value=6.4e-07  Score=47.58  Aligned_cols=24  Identities=25%  Similarity=0.652  Sum_probs=13.7

Q ss_pred             cccccccccccCChHHHHHHHHHh
Q psy6525         321 DYKCYICGNRYATQKYLEEHIRLH  344 (360)
Q Consensus       321 ~~~C~~C~~~f~~~~~l~~H~~~h  344 (360)
                      ||+|+.||+.|.+.+.|..|+++|
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            3 PYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             TEEETTTTEEESCHHHHHHHHTTC
T ss_pred             CcCCCCCCcccCCHHHHHHHHHhc
Confidence            455555555555555555555554

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.17  E-value=1.1e-06  Score=47.75  Aligned_cols=27  Identities=30%  Similarity=0.610  Sum_probs=20.1

Q ss_pred             cccccccccccCChHHHHHHHHHhCCC
Q psy6525         321 DYKCYICGNRYATQKYLEEHIRLHQGH  347 (360)
Q Consensus       321 ~~~C~~C~~~f~~~~~l~~H~~~h~g~  347 (360)
                      ||.|.+|++.|.+.+.|..|+++|+|+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   28 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHccC
Confidence            577777777777777777777777764

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.16  E-value=7.8e-07  Score=51.31  Aligned_cols=27  Identities=37%  Similarity=0.795  Sum_probs=14.9

Q ss_pred             Ccccccc--cccccCChHHHHHHHHHhCC
Q psy6525         320 QDYKCYI--CGNRYATQKYLEEHIRLHQG  346 (360)
Q Consensus       320 ~~~~C~~--C~~~f~~~~~l~~H~~~h~g  346 (360)
                      +||.|.+  |++.|.+.+.|..|+++|+|
T Consensus         7 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~   35 (37)
T 1va1_A            7 KQHICHIQGCGKVYGKTSHLRAHLRWHTG   35 (37)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            4555553  55555555555555555554

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.16  E-value=7.7e-07  Score=47.18  Aligned_cols=25  Identities=24%  Similarity=0.721  Sum_probs=16.4

Q ss_pred             CccccccchhhhcCHHHHHHHHhhh
Q psy6525         293 NKYQCAMCKKQYASKKMLEKHIRRH  317 (360)
Q Consensus       293 ~~~~C~~C~~~f~~~~~L~~H~~~h  317 (360)
                      +||.|+.|++.|.+.+.|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHc
Confidence            4666666666666666666666655

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.15  E-value=6.2e-07  Score=47.63  Aligned_cols=25  Identities=28%  Similarity=0.749  Sum_probs=15.9

Q ss_pred             CccccccchhhhcCHHHHHHHHhhh
Q psy6525         293 NKYQCAMCKKQYASKKMLEKHIRRH  317 (360)
Q Consensus       293 ~~~~C~~C~~~f~~~~~L~~H~~~h  317 (360)
                      +||.|+.|++.|...+.|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhc
Confidence            4566666666666666666666655

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.14  E-value=1.5e-07  Score=57.79  Aligned_cols=31  Identities=19%  Similarity=0.537  Sum_probs=13.4

Q ss_pred             hhcCCCccccc--cchhhhcCHHHHHHHHhhhc
Q psy6525         288 RHEEPNKYQCA--MCKKQYASKKMLEKHIRRHE  318 (360)
Q Consensus       288 ~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~  318 (360)
                      .|++++||.|+  .|++.|.+.+.|..|+++|+
T Consensus        12 ~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~   44 (47)
T 1ncs_A           12 KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHL   44 (47)
T ss_dssp             EEETTTEEECCCTTCCCEECSSSSHHHHHHHHT
T ss_pred             ccCCCCCeECCCCCCCCccCCHHHHHHHHHHcc
Confidence            34444444442  34444444444444444443

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.11  E-value=2.8e-07  Score=56.52  Aligned_cols=37  Identities=14%  Similarity=0.372  Sum_probs=31.7

Q ss_pred             HHHHhhhcC-Cccccc--ccccccCChHHHHHHHHHhCCC
Q psy6525         311 EKHIRRHEG-QDYKCY--ICGNRYATQKYLEEHIRLHQGH  347 (360)
Q Consensus       311 ~~H~~~h~~-~~~~C~--~C~~~f~~~~~l~~H~~~h~g~  347 (360)
                      ..|...|++ +||+|.  .|++.|.+.+.|..|+++|+|+
T Consensus         7 ~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A            7 IDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             GGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             HHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            345556877 799996  7999999999999999999985

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.10  E-value=1.8e-06  Score=47.83  Aligned_cols=28  Identities=25%  Similarity=0.511  Sum_probs=18.5

Q ss_pred             Cccccc--ccccccCChHHHHHHHHHhCCC
Q psy6525         320 QDYKCY--ICGNRYATQKYLEEHIRLHQGH  347 (360)
Q Consensus       320 ~~~~C~--~C~~~f~~~~~l~~H~~~h~g~  347 (360)
                      +||.|.  .|++.|.+.+.|..|+++|+|+
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            456666  6666666666666676666654

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.09  E-value=1.7e-06  Score=46.93  Aligned_cols=25  Identities=24%  Similarity=0.737  Sum_probs=11.6

Q ss_pred             ccccccchhhhcCHHHHHHHHhhhc
Q psy6525         294 KYQCAMCKKQYASKKMLEKHIRRHE  318 (360)
Q Consensus       294 ~~~C~~C~~~f~~~~~L~~H~~~h~  318 (360)
                      ||.|+.|++.|.+...|..|+++|+
T Consensus         3 ~~~C~~C~~~f~~~~~l~~H~~~h~   27 (30)
T 2m0d_A            3 PYQCDYCGRSFSDPTSKMRHLETHD   27 (30)
T ss_dssp             CEECTTTCCEESCHHHHHHHHHTTC
T ss_pred             CccCCCCCcccCCHHHHHHHHHHhc
Confidence            4444444444444444444444443

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.09  E-value=2.1e-06  Score=46.17  Aligned_cols=23  Identities=30%  Similarity=0.915  Sum_probs=9.3

Q ss_pred             cccccchhhhcCHHHHHHHHhhh
Q psy6525         295 YQCAMCKKQYASKKMLEKHIRRH  317 (360)
Q Consensus       295 ~~C~~C~~~f~~~~~L~~H~~~h  317 (360)
                      |.|+.|++.|.+...|..|+++|
T Consensus         3 ~~C~~C~~~f~~~~~l~~H~~~h   25 (29)
T 1ard_A            3 FVCEVCTRAFARQEHLKRHYRSH   25 (29)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHH
T ss_pred             eECCCCCcccCCHHHHHHHHHHh
Confidence            33444444444444444444433

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.08  E-value=1.6e-06  Score=46.71  Aligned_cols=26  Identities=31%  Similarity=0.484  Sum_probs=11.6

Q ss_pred             cccccccccccCChhHHHHhHhhhcC
Q psy6525         266 VHECNLCAKLFACKRSLQDHMQRHEE  291 (360)
Q Consensus       266 ~~~C~~C~~~f~~~~~l~~H~~~h~~  291 (360)
                      ||.|+.|++.|.....|..|+++|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILLHEN   27 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTGGGS
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhcC
Confidence            34444444444444444444444443

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.35  E-value=4.7e-07  Score=47.58  Aligned_cols=24  Identities=42%  Similarity=0.873  Sum_probs=13.2

Q ss_pred             cccccccccccCChHHHHHHHHHh
Q psy6525         321 DYKCYICGNRYATQKYLEEHIRLH  344 (360)
Q Consensus       321 ~~~C~~C~~~f~~~~~l~~H~~~h  344 (360)
                      ||.|++||+.|.+.+.|..|+++|
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            455555555555555555555554

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.34  E-value=4.8e-07  Score=49.26  Aligned_cols=26  Identities=35%  Similarity=0.841  Sum_probs=15.1

Q ss_pred             cccccccccccCChHHHHHHHHHhCC
Q psy6525         321 DYKCYICGNRYATQKYLEEHIRLHQG  346 (360)
Q Consensus       321 ~~~C~~C~~~f~~~~~l~~H~~~h~g  346 (360)
                      ||+|++|++.|.+...|..|+++|+|
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (30)
T 2lvr_A            3 PYVCIHCQRQFADPGALQRHVRIHTG   28 (30)
Confidence            45555555555555555555555554

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.06  E-value=1.6e-06  Score=47.08  Aligned_cols=27  Identities=26%  Similarity=0.763  Sum_probs=18.9

Q ss_pred             cccccccccccCChHHHHHH-HHHhCCC
Q psy6525         321 DYKCYICGNRYATQKYLEEH-IRLHQGH  347 (360)
Q Consensus       321 ~~~C~~C~~~f~~~~~l~~H-~~~h~g~  347 (360)
                      ||.|+.|++.|.+.+.|..| +++|+|+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccCC
Confidence            56777777777777777777 5666664

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.06  E-value=1.7e-06  Score=45.66  Aligned_cols=26  Identities=31%  Similarity=0.875  Sum_probs=14.2

Q ss_pred             ccccccchhhhcCHHHHHHHHhhhcC
Q psy6525         294 KYQCAMCKKQYASKKMLEKHIRRHEG  319 (360)
Q Consensus       294 ~~~C~~C~~~f~~~~~L~~H~~~h~~  319 (360)
                      ||.|+.|++.|.+...|..|+++|++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            35555555555555555555555543

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.05  E-value=2.4e-06  Score=46.24  Aligned_cols=25  Identities=20%  Similarity=0.420  Sum_probs=11.1

Q ss_pred             ccccccccccCChhHHHHhHhhhcC
Q psy6525         267 HECNLCAKLFACKRSLQDHMQRHEE  291 (360)
Q Consensus       267 ~~C~~C~~~f~~~~~l~~H~~~h~~  291 (360)
                      |.|+.|++.|...+.|..|+++|++
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~h~~   27 (30)
T 1klr_A            3 YQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             ccCCCCCCccCCHHHHHHHHHHHcc
Confidence            4444444444444444444444443

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.01  E-value=2.8e-06  Score=45.54  Aligned_cols=26  Identities=31%  Similarity=0.580  Sum_probs=12.0

Q ss_pred             cccccccccccCChhHHHHhHhhhcC
Q psy6525         266 VHECNLCAKLFACKRSLQDHMQRHEE  291 (360)
Q Consensus       266 ~~~C~~C~~~f~~~~~l~~H~~~h~~  291 (360)
                      ||.|+.|++.|.....|..|+++|++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKIHIA   27 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHHHHS
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHhcc
Confidence            34444444444444444444444443

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.01  E-value=3.8e-06  Score=46.39  Aligned_cols=26  Identities=31%  Similarity=0.571  Sum_probs=11.7

Q ss_pred             ccccc--ccccccCChhHHHHhHhhhcC
Q psy6525         266 VHECN--LCAKLFACKRSLQDHMQRHEE  291 (360)
Q Consensus       266 ~~~C~--~C~~~f~~~~~l~~H~~~h~~  291 (360)
                      ||.|.  .|++.|.....|..|+++|++
T Consensus         3 ~~~C~~~~C~k~f~~~~~L~~H~~~H~~   30 (32)
T 1zfd_A            3 PYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             SBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CCcCcCCCCCCccCCHHHHHHHHHHccC
Confidence            44444  444444444444444444443

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.01  E-value=2.5e-06  Score=45.77  Aligned_cols=23  Identities=35%  Similarity=0.807  Sum_probs=9.6

Q ss_pred             cccccchhhhcCHHHHHHHHhhh
Q psy6525         295 YQCAMCKKQYASKKMLEKHIRRH  317 (360)
Q Consensus       295 ~~C~~C~~~f~~~~~L~~H~~~h  317 (360)
                      |.|+.|++.|.+...|..|+++|
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~H   25 (29)
T 2m0f_A            3 LKCRECGKQFTTSGNLKRHLRIH   25 (29)
T ss_dssp             EECTTTSCEESCHHHHHHHHHHH
T ss_pred             ccCCCCCCccCChhHHHHHHHHh
Confidence            34444444444444444444443

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.26  E-value=7.6e-07  Score=46.72  Aligned_cols=25  Identities=36%  Similarity=0.828  Sum_probs=16.4

Q ss_pred             CccccccchhhhcCHHHHHHHHhhh
Q psy6525         293 NKYQCAMCKKQYASKKMLEKHIRRH  317 (360)
Q Consensus       293 ~~~~C~~C~~~f~~~~~L~~H~~~h  317 (360)
                      +||.|+.|++.|.+.+.|..|+++|
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            3566666666666666666666655

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.00  E-value=3.4e-06  Score=46.22  Aligned_cols=20  Identities=30%  Similarity=0.695  Sum_probs=8.8

Q ss_pred             cchhhhcCHHHHHHHHhhhc
Q psy6525         299 MCKKQYASKKMLEKHIRRHE  318 (360)
Q Consensus       299 ~C~~~f~~~~~L~~H~~~h~  318 (360)
                      .|++.|.+.+.|..|+++|+
T Consensus         9 ~C~k~f~~~~~L~~H~~~H~   28 (31)
T 1sp2_A            9 YCGKRFTRSDELQRHKRTHT   28 (31)
T ss_dssp             TCCCBCSSHHHHHHHHTTTS
T ss_pred             CCCcccCCHhHHHHHHHHhc
Confidence            44444444444444444443

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.99  E-value=3e-06  Score=45.50  Aligned_cols=26  Identities=31%  Similarity=0.796  Sum_probs=18.2

Q ss_pred             ccccc--ccccccCChHHHHHHHHHhCC
Q psy6525         321 DYKCY--ICGNRYATQKYLEEHIRLHQG  346 (360)
Q Consensus       321 ~~~C~--~C~~~f~~~~~l~~H~~~h~g  346 (360)
                      +|.|.  .|++.|.+.+.|..|+++|+|
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            56677  777777777777777777664

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.22  E-value=9.5e-07  Score=47.67  Aligned_cols=26  Identities=38%  Similarity=0.818  Sum_probs=12.8

Q ss_pred             ccccccchhhhcCHHHHHHHHhhhcC
Q psy6525         294 KYQCAMCKKQYASKKMLEKHIRRHEG  319 (360)
Q Consensus       294 ~~~C~~C~~~f~~~~~L~~H~~~h~~  319 (360)
                      ||.|+.|++.|.+.+.|..|+++|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQHTG   27 (29)
Confidence            44455555555555555555544443

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.18  E-value=1.2e-06  Score=47.65  Aligned_cols=27  Identities=37%  Similarity=0.891  Sum_probs=13.8

Q ss_pred             CccccccchhhhcCHHHHHHHHhhhcC
Q psy6525         293 NKYQCAMCKKQYASKKMLEKHIRRHEG  319 (360)
Q Consensus       293 ~~~~C~~C~~~f~~~~~L~~H~~~h~~  319 (360)
                      +||.|+.|++.|.+...|..|+++|++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTG   28 (30)
Confidence            345555555555555555555555443

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.85  E-value=6.6e-06  Score=44.50  Aligned_cols=26  Identities=27%  Similarity=0.558  Sum_probs=11.6

Q ss_pred             cccccccccccCChhHHHHh-HhhhcC
Q psy6525         266 VHECNLCAKLFACKRSLQDH-MQRHEE  291 (360)
Q Consensus       266 ~~~C~~C~~~f~~~~~l~~H-~~~h~~  291 (360)
                      ||.|+.|++.|.+...|..| +++|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~   28 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSG   28 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccC
Confidence            34444444444444444444 334443

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.77  E-value=9.4e-06  Score=43.42  Aligned_cols=25  Identities=24%  Similarity=0.712  Sum_probs=14.8

Q ss_pred             ccccc--cchhhhcCHHHHHHHHhhhc
Q psy6525         294 KYQCA--MCKKQYASKKMLEKHIRRHE  318 (360)
Q Consensus       294 ~~~C~--~C~~~f~~~~~L~~H~~~h~  318 (360)
                      ||.|+  .|++.|.+.+.|..|+++|+
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            45565  66666666666666665554

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=97.32  E-value=0.00087  Score=53.29  Aligned_cols=68  Identities=18%  Similarity=0.137  Sum_probs=35.2

Q ss_pred             HHHHHHHhhcCCCCcccCCCCCccCCHHHHHHHHHHhcCCCcccccccccccCChhHHHHhHhhhcCCCc
Q psy6525         225 ALLVRHMQKHSSERFKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPNK  294 (360)
Q Consensus       225 ~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  294 (360)
                      ..|..|.....-.+..|+.|+..+ .+..|..|....-..++..|+.|+..+. ...|..|..++.|+.+
T Consensus        97 ~~l~~H~~~C~~~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~-~~~l~~H~~~~~~~~~  164 (170)
T 3hcs_A           97 RHLEDHQAHCEFALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMA-FEDKEIHDQNCPLALE  164 (170)
T ss_dssp             GGHHHHHTTCTTSEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEE-GGGHHHHHTTCCC---
T ss_pred             hHHHHHHhcCCceeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccC-HHHHHhHHHhCcChhh
Confidence            344555443333345555565555 3445556655555555566666665553 3455666666665544

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.31  E-value=0.0004  Score=45.22  Aligned_cols=23  Identities=17%  Similarity=0.297  Sum_probs=11.8

Q ss_pred             ccccc--cchhhhcCHHHHHHHHhh
Q psy6525         294 KYQCA--MCKKQYASKKMLEKHIRR  316 (360)
Q Consensus       294 ~~~C~--~C~~~f~~~~~L~~H~~~  316 (360)
                      +|.|.  .|++.+.....|..|++.
T Consensus        38 ~~~C~W~~C~~~~~~~~~L~~Hir~   62 (64)
T 1zw8_A           38 PLACNWEDCDFLGDDTASIVNHINA   62 (64)
T ss_dssp             CEECCCSSCCCEESSHHHHHHHHHH
T ss_pred             CCEeeCCCCcCCCCChHHHHhhccc
Confidence            45553  455555555555555554

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.30  E-value=0.00024  Score=46.28  Aligned_cols=45  Identities=20%  Similarity=0.313  Sum_probs=26.1

Q ss_pred             chhhhcCHHHHHHHHh-hhcC-C------ccccc--ccccccCChHHHHHHHHHh
Q psy6525         300 CKKQYASKKMLEKHIR-RHEG-Q------DYKCY--ICGNRYATQKYLEEHIRLH  344 (360)
Q Consensus       300 C~~~f~~~~~L~~H~~-~h~~-~------~~~C~--~C~~~f~~~~~l~~H~~~h  344 (360)
                      |++.|.+...|..|+. .|.+ +      +|.|.  .|++.+.....|..|++..
T Consensus         9 C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            9 CPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            5555555555555553 3433 1      46665  5666666666666666654

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=96.81  E-value=0.00086  Score=53.32  Aligned_cols=139  Identities=16%  Similarity=0.281  Sum_probs=83.6

Q ss_pred             ceecccchhccCChHHHHHHHhhccCCCCCccccccccccccChHHHHHHHHHcCCcccccccccccccCHH-----HHH
Q psy6525          99 NVLCYICDEILKDIDDLRYHGLLHATPLGTQFQCNVCFLMLNNRCYTRFHLLKHNWVRFKCDLCSRTFNSQS-----YLQ  173 (360)
Q Consensus        99 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~-----~l~  173 (360)
                      .+.|++|...|...                 +.+ .||-.|=... +...+...   ...|+.|...+....     .+.
T Consensus        18 ~~~C~IC~~~~~~p-----------------v~~-~CgH~fC~~C-i~~~~~~~---~~~CP~Cr~~~~~~~~~~~~~~~   75 (170)
T 3hcs_A           18 KYECPICLMALREA-----------------VQT-PCGHRFCKAC-IIKSIRDA---GHKCPVDNEILLENQLFPDNFAK   75 (170)
T ss_dssp             GGBCTTTCSBCSSE-----------------EEC-TTSCEEEHHH-HHHHHHHH---CSBCTTTCCBCCGGGCEECHHHH
T ss_pred             CCCCCCCChhhcCc-----------------EEC-CCCCHHHHHH-HHHHHHhC---CCCCCCCccCcchhhhhhhHHHH
Confidence            57899998887543                 222 2555553322 22222221   237888877665421     111


Q ss_pred             HHHHHcCCCceeec--ccccccccChhHHHHHHHhcCCCCCcCccccccccCHHHHHHHHh-hcCCCCcccCCCCCccCC
Q psy6525         174 QHKKHDHEGVKYKC--KECGKCYTQNTNLKQHMLSHKGIFFICFHCNKNFTHRALLVRHMQ-KHSSERFKCDLCGKVTPY  250 (360)
Q Consensus       174 ~H~~~~h~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~C~~C~~~f~~  250 (360)
                      .-+    ......|  ..|+..+. ...|..|+..-.-.+..|+.|+..+ .+..|..|+. .....+..|+.|+..+. 
T Consensus        76 ~~i----~~l~v~C~n~GC~~~~~-~~~l~~H~~~C~~~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~-  148 (170)
T 3hcs_A           76 REI----LSLMVKCPNEGCLHKME-LRHLEDHQAHCEFALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMA-  148 (170)
T ss_dssp             HHH----HTSEEECCSTTCCCEEE-GGGHHHHHTTCTTSEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEE-
T ss_pred             HHH----hhcccCCCCCCCCceec-HhHHHHHHhcCCceeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccC-
Confidence            111    2345677  46777654 5667888766555677888888877 4667888885 44445677889988774 


Q ss_pred             HHHHHHHHHHhcCCCc
Q psy6525         251 YQHYLRHMRIHQGLEV  266 (360)
Q Consensus       251 ~~~l~~H~~~h~~~~~  266 (360)
                      ...|..|..++.|+.+
T Consensus       149 ~~~l~~H~~~~~~~~~  164 (170)
T 3hcs_A          149 FEDKEIHDQNCPLALE  164 (170)
T ss_dssp             GGGHHHHHTTCCC---
T ss_pred             HHHHHhHHHhCcChhh
Confidence            4677888887777654

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.52  E-value=0.002  Score=48.34  Aligned_cols=21  Identities=24%  Similarity=0.441  Sum_probs=15.1

Q ss_pred             CcccCCCCCccCCHHHHHHHH
Q psy6525         238 RFKCDLCGKVTPYYQHYLRHM  258 (360)
Q Consensus       238 ~~~C~~C~~~f~~~~~l~~H~  258 (360)
                      ++.|.+|+..|.+.+.+..|.
T Consensus        32 ~~~C~~C~v~~~S~s~~~~H~   52 (127)
T 1zu1_A           32 DTQCKVCSAVLISESQKLAHY   52 (127)
T ss_dssp             SSEETTTTEECCSHHHHHHHH
T ss_pred             CCcCcCCCCEeCCHHHHHHHH
Confidence            566777777777777777776

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.26  E-value=0.0074  Score=45.18  Aligned_cols=22  Identities=18%  Similarity=0.378  Sum_probs=14.7

Q ss_pred             CceecccchhccCChHHHHHHH
Q psy6525          98 KNVLCYICDEILKDIDDLRYHG  119 (360)
Q Consensus        98 ~~~~C~~C~~~f~~~~~l~~H~  119 (360)
                      +++.|.+|+..|.+...+..|.
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~   52 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHY   52 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHH
T ss_pred             CCCcCcCCCCEeCCHHHHHHHH
Confidence            3466777777777777766665

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.24  E-value=0.00084  Score=49.48  Aligned_cols=30  Identities=17%  Similarity=0.375  Sum_probs=21.4

Q ss_pred             hhhcCCCccccccchhhhcCHHHHHHHHhh
Q psy6525         287 QRHEEPNKYQCAMCKKQYASKKMLEKHIRR  316 (360)
Q Consensus       287 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~  316 (360)
                      ..|+|++||.|..|++.|.+.+.|..|+++
T Consensus        43 ed~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           43 PDLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             ccCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            346677777777777777777777777664

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.02  E-value=0.0015  Score=48.08  Aligned_cols=30  Identities=27%  Similarity=0.500  Sum_probs=26.8

Q ss_pred             HHhcCCCcccccccccccCChhHHHHhHhh
Q psy6525         259 RIHQGLEVHECNLCAKLFACKRSLQDHMQR  288 (360)
Q Consensus       259 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  288 (360)
                      ..|+|+++|.|..|++.|.+...|..|+++
T Consensus        43 ed~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           43 PDLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             ccCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            357889999999999999999999999875

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.39  E-value=0.011  Score=34.71  Aligned_cols=24  Identities=17%  Similarity=0.376  Sum_probs=15.5

Q ss_pred             CcccccccccccCChHHHHHHHHH
Q psy6525         320 QDYKCYICGNRYATQKYLEEHIRL  343 (360)
Q Consensus       320 ~~~~C~~C~~~f~~~~~l~~H~~~  343 (360)
                      .+|.|+.|+..|.....|+.||+-
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmky   34 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCY   34 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhhh
Confidence            356666666666666666666663

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.87  E-value=0.012  Score=34.54  Aligned_cols=25  Identities=20%  Similarity=0.460  Sum_probs=20.1

Q ss_pred             CccccccchhhhcCHHHHHHHHhhh
Q psy6525         293 NKYQCAMCKKQYASKKMLEKHIRRH  317 (360)
Q Consensus       293 ~~~~C~~C~~~f~~~~~L~~H~~~h  317 (360)
                      .+|.|+.|+..|.....|+.||+..
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmkyc   35 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYC   35 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhhhc
Confidence            5688888888888888888888743

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=93.24  E-value=0.059  Score=29.57  Aligned_cols=26  Identities=27%  Similarity=0.547  Sum_probs=18.9

Q ss_pred             ccccccccccccCHHHHHHHHHHcCC
Q psy6525         156 RFKCDLCSRTFNSQSYLQQHKKHDHE  181 (360)
Q Consensus       156 ~~~C~~C~~~f~~~~~l~~H~~~~h~  181 (360)
                      .|.|++|.+.|.+...|..|....|.
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~   30 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHD   30 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhccc
Confidence            36777777777777777777776664

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=92.44  E-value=0.096  Score=28.72  Aligned_cols=26  Identities=23%  Similarity=0.278  Sum_probs=22.8

Q ss_pred             ceecccchhccCChHHHHHHHhhccC
Q psy6525          99 NVLCYICDEILKDIDDLRYHGLLHAT  124 (360)
Q Consensus        99 ~~~C~~C~~~f~~~~~l~~H~~~~~~  124 (360)
                      .|.|++|.+.|.+...|..|....|.
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~   30 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHD   30 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhccc
Confidence            58999999999999999999876654

>2k9h_A Glycoprotein; hantavirus, zinc finger, CCHC, metal binding protein; NMR {Andes virus}

Probab=87.59  E-value=0.6  Score=28.19  Aligned_cols=47  Identities=17%  Similarity=0.325  Sum_probs=33.1

Q ss_pred             ceecccchhccCChHHHHHHHhhccCCCCCccccccccc-cccChHHHHHHHH
Q psy6525          99 NVLCYICDEILKDIDDLRYHGLLHATPLGTQFQCNVCFL-MLNNRCYTRFHLL  150 (360)
Q Consensus        99 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~C~~C~~-~f~~~~~l~~H~~  150 (360)
                      ...|++|.....+..+|+.|...-..     -+||.|-. .-.+...|+.|.+
T Consensus         3 smvC~~C~~ECET~kEl~~H~~sCp~-----gqCPYC~~~~e~tesAlQaHfk   50 (57)
T 2k9h_A            3 SMVCDVCHHECETAKELESHRQSCIN-----GQCPYCMTITEATESALQAHYS   50 (57)
T ss_dssp             TTBCTTTCCBCSSTTTHHHHHHHHTT-----TBCTTTCCBCCSSHHHHHHHHT
T ss_pred             cchhhHHHhhhhhHHHHHHHhccCCC-----CCCCcccCcCCcCHHHHHHHHH
Confidence            35799999999999999999876554     35777743 3445666666653

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=83.27  E-value=0.7  Score=30.62  Aligned_cols=38  Identities=21%  Similarity=0.583  Sum_probs=15.1

Q ss_pred             cccccccccccCHHHHHHHHHHcCCCceeeccccccccc
Q psy6525         157 FKCDLCSRTFNSQSYLQQHKKHDHEGVKYKCKECGKCYT  195 (360)
Q Consensus       157 ~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~C~~~f~  195 (360)
                      |.|+.|+.++. +..|..|...-.+...|.|-.|+..|.
T Consensus        11 F~C~~Cgd~lK-K~kv~~H~~~Cr~~~~~SCIDC~~~F~   48 (79)
T 1wjv_A           11 FTCNACGESVK-KIQVEKHVSNCRNCECLSCIDCGKDFW   48 (79)
T ss_dssp             EEESSSCCEEE-TTHHHHHHHHCTTCCEEEETTTTEEEE
T ss_pred             EEcCCCCCeee-cccchhHHhhCCCCCcEEecccCCeeC
Confidence            34444443333 223444433322223344444444443

>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}

Probab=82.55  E-value=0.44  Score=31.63  Aligned_cols=33  Identities=21%  Similarity=0.608  Sum_probs=13.6

Q ss_pred             ccccccCChhHHHHhHhhhcCCCccccccchhhh
Q psy6525         271 LCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQY  304 (360)
Q Consensus       271 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f  304 (360)
                      .|+..+. +..|..|+...-..++..|.+|+..+
T Consensus        22 ~C~~~v~-r~~l~~H~~~~C~~r~v~C~~C~~~~   54 (76)
T 2yuc_A           22 RCPMKLS-RRDLPAHLQHDCPKRRLKCEFCGCDF   54 (76)
T ss_dssp             CCSCBCC-SSSSTTTTTTSCTTSCCCCSSSCCCC
T ss_pred             cccHHhh-HhHHHhhCHhhCCCcceECCCCCCcc
Confidence            3444332 23344444433333444444444444

>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A

Probab=82.55  E-value=0.86  Score=23.66  Aligned_cols=22  Identities=27%  Similarity=0.535  Sum_probs=17.6

Q ss_pred             ceecccchhccCChHHHHHHHh
Q psy6525          99 NVLCYICDEILKDIDDLRYHGL  120 (360)
Q Consensus        99 ~~~C~~C~~~f~~~~~l~~H~~  120 (360)
                      .+.|++|.....+...|+.|..
T Consensus         3 k~~CpvCk~q~Pd~kt~~~H~e   24 (28)
T 2jvx_A            3 DFCCPKCQYQAPDMDTLQIHVM   24 (28)
T ss_dssp             CEECTTSSCEESSHHHHHHHHH
T ss_pred             cccCccccccCcChHHHHHHHH
Confidence            4788888888888888888864

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=82.02  E-value=0.57  Score=31.81  Aligned_cols=25  Identities=24%  Similarity=0.640  Sum_probs=20.8

Q ss_pred             CcccccccccccCChHHHHHHHHHhCCC
Q psy6525         320 QDYKCYICGNRYATQKYLEEHIRLHQGH  347 (360)
Q Consensus       320 ~~~~C~~C~~~f~~~~~l~~H~~~h~g~  347 (360)
                      .-..|-+||+.|+   .|.+|+++|+|-
T Consensus        20 d~iiClecGK~fK---~LkRHL~~~hgl   44 (87)
T 2jsp_A           20 DHIVCLECGGSFK---SLKRHLTTHHSM   44 (87)
T ss_dssp             SCEECTBTCCEES---BHHHHHHHTTCS
T ss_pred             CceEecccchhhH---HHHHHHHHccCC
Confidence            3467999999998   577999998886

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=81.97  E-value=1.1  Score=23.73  Aligned_cols=25  Identities=20%  Similarity=0.644  Sum_probs=18.1

Q ss_pred             cccccccccccCHHHHHHHHHHcCC
Q psy6525         157 FKCDLCSRTFNSQSYLQQHKKHDHE  181 (360)
Q Consensus       157 ~~C~~C~~~f~~~~~l~~H~~~~h~  181 (360)
                      -.|..|.+.|.+..+|..|.+..|.
T Consensus        10 qhcrfckkkysdvknlikhire~hd   34 (37)
T 2elu_A           10 QHCRFCKKKYSDVKNLIKHIRDAHD   34 (37)
T ss_dssp             CEETTTTEECSSHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            3577788888888888888776553

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=81.30  E-value=1.8  Score=23.80  Aligned_cols=21  Identities=29%  Similarity=0.491  Sum_probs=9.8

Q ss_pred             cccccccccccCHHHHHHHHH
Q psy6525         157 FKCDLCSRTFNSQSYLQQHKK  177 (360)
Q Consensus       157 ~~C~~C~~~f~~~~~l~~H~~  177 (360)
                      +.|..|+..|.....+..|++
T Consensus         9 ~~C~~C~IsF~~l~ty~aHKk   29 (36)
T 1fu9_A            9 KYCSTCDISFNYVKTYLAHKQ   29 (36)
T ss_dssp             SEETTTTEECSSHHHHHHHHH
T ss_pred             CeeccccceehhhHHHhhhhe
Confidence            344444444444444444443

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=81.22  E-value=0.93  Score=24.91  Aligned_cols=23  Identities=22%  Similarity=0.368  Sum_probs=13.5

Q ss_pred             CccccccchhhhcCHHHHHHHHh
Q psy6525         293 NKYQCAMCKKQYASKKMLEKHIR  315 (360)
Q Consensus       293 ~~~~C~~C~~~f~~~~~L~~H~~  315 (360)
                      .++.|..|+-+|.+...+..|++
T Consensus         7 ~~~~C~~C~IsF~~l~ty~aHKk   29 (36)
T 1fu9_A            7 MKKYCSTCDISFNYVKTYLAHKQ   29 (36)
T ss_dssp             CCSEETTTTEECSSHHHHHHHHH
T ss_pred             CcCeeccccceehhhHHHhhhhe
Confidence            34556666666666666666654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	360
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	2e-07
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	2e-05
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	1e-04
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	0.001
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	0.002
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	1e-05
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	0.003
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	3e-05
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	4e-05
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	2e-04
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.003
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	3e-04
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	4e-04
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.002
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	5e-04
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	8e-04
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	0.001
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	0.004
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	0.002
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	0.002
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	0.002
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	0.002
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	0.002
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	0.002
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	0.003
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.003

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.1 bits (106), Expect = 2e-07
 Identities = 14/51 (27%), Positives = 21/51 (41%), Gaps = 1/51 (1%)

Query: 157 FKCDLCSRTFNSQSYLQQHKKHDHEGVKYKCKECGKCYTQNTNLKQHMLSH 207
           + C  C ++F  +S   +H         Y C  CGK +    +L  HM  H
Sbjct: 4   YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.7 bits (92), Expect = 2e-05
 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)

Query: 185 YKCKECGKCYTQNTNLKQHMLSHKG-IFFICFHCNKNFTHRALLVRHMQKH 234
           Y C +CGK +T  +   +HM  H G   + C  C K F  +  LV HM+ H
Sbjct: 4   YPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.4 bits (86), Expect = 1e-04
 Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 1/51 (1%)

Query: 239 FKCDLCGKVTPYYQHYLRHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRH 289
           + C  CGK   +     RHM +H GL  + C +C K F  K  L  HM+ H
Sbjct: 4   YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.7 bits (79), Expect = 0.001
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)

Query: 216 HCNKNFTHRALLVRHM-QKHSSERFKCDLCGKVTPYYQHYLRHMRIH 261
            C K+FTH++   RHM        + C +CGK      H + HM+IH
Sbjct: 7   QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.9 bits (77), Expect = 0.002
 Identities = 15/46 (32%), Positives = 20/46 (43%)

Query: 272 CAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRH 317
           C K F  K     HM  H     Y C +C K++  K  L  H++ H
Sbjct: 8   CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.5 bits (93), Expect = 1e-05
 Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
           H G K Y C ECGK +++++ L QH   H G
Sbjct: 2   HSGEKPYGCVECGKAFSRSSILVQHQRVHTG 32

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.0 bits (76), Expect = 0.003
 Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 1/31 (3%)

Query: 234 HSSER-FKCDLCGKVTPYYQHYLRHMRIHQG 263
           HS E+ + C  CGK        ++H R+H G
Sbjct: 2   HSGEKPYGCVECGKAFSRSSILVQHQRVHTG 32

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.4 bits (90), Expect = 3e-05
 Identities = 6/25 (24%), Positives = 17/25 (68%)

Query: 185 YKCKECGKCYTQNTNLKQHMLSHKG 209
           ++C+ C + ++++ +L  H+ +H G
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTHTG 28

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 38.0 bits (89), Expect = 4e-05
 Identities = 7/25 (28%), Positives = 14/25 (56%)

Query: 185 YKCKECGKCYTQNTNLKQHMLSHKG 209
           + C+ C + + +  +LK+H  SH  
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTN 27

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.1 bits (84), Expect = 2e-04
 Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSH 207
           H G K Y+C  C   +TQ+  +K H+L  
Sbjct: 3   HSGEKPYECYICHARFTQSGTMKMHILQK 31

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.0 bits (76), Expect = 0.003
 Identities = 8/31 (25%), Positives = 16/31 (51%)

Query: 259 RIHQGLEVHECNLCAKLFACKRSLQDHMQRH 289
           R H G + +EC +C   F    +++ H+ + 
Sbjct: 1   RTHSGEKPYECYICHARFTQSGTMKMHILQK 31

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (82), Expect = 3e-04
 Identities = 7/25 (28%), Positives = 16/25 (64%)

Query: 185 YKCKECGKCYTQNTNLKQHMLSHKG 209
           + C EC K + ++ +L +H+ +H+ 
Sbjct: 3   FACPECPKRFMRSDHLSKHIKTHQN 27

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (82), Expect = 4e-04
 Identities = 10/31 (32%), Positives = 12/31 (38%), Gaps = 1/31 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSHKG 209
           H G K Y C  C K + Q   L  H   +  
Sbjct: 3   HTGEKPYACSHCDKTFRQKQLLDMHFKRYHD 33

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.5 bits (77), Expect = 0.002
 Identities = 13/35 (37%), Positives = 20/35 (57%)

Query: 259 RIHQGLEVHECNLCAKLFACKRSLQDHMQRHEEPN 293
           R H G + + C+ C K F  K+ L  H +R+ +PN
Sbjct: 1   RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN 35

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.5 bits (80), Expect = 5e-04
 Identities = 12/23 (52%), Positives = 15/23 (65%)

Query: 185 YKCKECGKCYTQNTNLKQHMLSH 207
           YKC ECGK ++QN+ L  H   H
Sbjct: 3   YKCLECGKAFSQNSGLINHQRIH 25

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.6 bits (80), Expect = 8e-04
 Identities = 9/33 (27%), Positives = 16/33 (48%), Gaps = 1/33 (3%)

Query: 157 FKCDLCSRTFNSQSYLQQHKKHDHEGVK-YKCK 188
           + C  C + F+   +L  H K  H   + +KC+
Sbjct: 6   YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ 38

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.8 bits (78), Expect = 0.001
 Identities = 7/20 (35%), Positives = 13/20 (65%)

Query: 185 YKCKECGKCYTQNTNLKQHM 204
           Y C+ CGK +++  +L  H+
Sbjct: 6   YICQSCGKGFSRPDHLNGHI 25

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.7 bits (75), Expect = 0.004
 Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 2/34 (5%)

Query: 212 FICFHCNKNFTHRALLVRHMQK-HSSER-FKCDL 243
           +IC  C K F+    L  H+++ H+SER  KC +
Sbjct: 6   YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.5 bits (77), Expect = 0.002
 Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 2/27 (7%)

Query: 185 YKCKE--CGKCYTQNTNLKQHMLSHKG 209
           +KC    C K Y++  NLK H+ SH G
Sbjct: 3   HKCTFEGCRKSYSRLENLKTHLRSHTG 29

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.6 bits (77), Expect = 0.002
 Identities = 9/33 (27%), Positives = 15/33 (45%)

Query: 257 HMRIHQGLEVHECNLCAKLFACKRSLQDHMQRH 289
             R   G++  +C  C + F+    L  H +RH
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.2 bits (76), Expect = 0.002
 Identities = 7/29 (24%), Positives = 17/29 (58%), Gaps = 1/29 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSH 207
             G+K ++C +C + ++++ +L  H   H
Sbjct: 6   STGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.6 bits (77), Expect = 0.002
 Identities = 7/29 (24%), Positives = 13/29 (44%), Gaps = 1/29 (3%)

Query: 180 HEGVK-YKCKECGKCYTQNTNLKQHMLSH 207
             G + + C+ C   +T   N  +H+  H
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLKVH 30

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.2 bits (76), Expect = 0.002
 Identities = 8/34 (23%), Positives = 14/34 (41%)

Query: 256 RHMRIHQGLEVHECNLCAKLFACKRSLQDHMQRH 289
           R     +    ++C+ C K F+    L  H + H
Sbjct: 2   RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTH 35

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.2 bits (76), Expect = 0.002
 Identities = 12/36 (33%), Positives = 16/36 (44%), Gaps = 1/36 (2%)

Query: 229 RHMQKHSSER-FKCDLCGKVTPYYQHYLRHMRIHQG 263
           R   +    R +KCD CGK   +     +H R H G
Sbjct: 2   RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG 37

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 32.7 bits (75), Expect = 0.003
 Identities = 7/27 (25%), Positives = 15/27 (55%), Gaps = 2/27 (7%)

Query: 185 YKCKE--CGKCYTQNTNLKQHMLSHKG 209
           Y C    C + ++++ +L +H+  H G
Sbjct: 3   YACPVESCDRRFSRSADLTRHIRIHTG 29

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.7 bits (75), Expect = 0.003
 Identities = 9/27 (33%), Positives = 16/27 (59%), Gaps = 2/27 (7%)

Query: 185 YKC--KECGKCYTQNTNLKQHMLSHKG 209
           + C    CGK +T++  L++H  +H G
Sbjct: 3   FMCTWSYCGKRFTRSDELQRHKRTHTG 29

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	360
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.63
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.63
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.22
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.22
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.2
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.2
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.19
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.15
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.15
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.14
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.12
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.08
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.08
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.06
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.04
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.02
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.02
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.0
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.94
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.92
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.92
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.91
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.88
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.88
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.88
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.88
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.82
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.82
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.79
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.75
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.72
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.71
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.68
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.68
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.66
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.52
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.51
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.5
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.5
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.49
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.39
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.36
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.28
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.18
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.11
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.1
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.06
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.04
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.99
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.98
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.88
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.87
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.87
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.77
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.63
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.62
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.61
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.59
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.52
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.48
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.48
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.38
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.38
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.32
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.29
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.28
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.18
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.14
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.04
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.0
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.99
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	96.97
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.94
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.93
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.88
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.87
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.83
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.82
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.71
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.66
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.6
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.58
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.55
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.5
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.42
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.4
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.37
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	96.16
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.84
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.72
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.69
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	95.52
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	95.35
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	95.16
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	94.7
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	94.66
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	94.64
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.33
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	93.94
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	93.72
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	92.86
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	92.76
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	92.06
d1y0jb1	36	U-shaped transcription factor, different fingers {	91.54
d1y0jb1	36	U-shaped transcription factor, different fingers {	90.91
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	90.8
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	90.72
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	90.0
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	89.89
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	89.18
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	88.64
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	87.94
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	87.87
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	87.2
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	87.16
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	86.48
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	86.19
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	83.19
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	82.84
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	82.32
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	80.47

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=5.4e-17  Score=101.87  Aligned_cols=52  Identities=31%  Similarity=0.636  Sum_probs=25.6

Q ss_pred             CcccccccccccCChhHHHHhHhhhcCCCccccccchhhhcCHHHHHHHHhhh
Q psy6525         265 EVHECNLCAKLFACKRSLQDHMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRH  317 (360)
Q Consensus       265 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h  317 (360)
                      +||.|. ||+.|....+|..|+++|+|++||.|++||++|.+.+.|..|+++|
T Consensus         2 K~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           2 KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             cCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            444552 5555555555555555555555555555555555555555554443

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=6.6e-17  Score=101.48  Aligned_cols=52  Identities=29%  Similarity=0.789  Sum_probs=49.9

Q ss_pred             CCccccccchhhhcCHHHHHHHHhhhcC-CcccccccccccCChHHHHHHHHHh
Q psy6525         292 PNKYQCAMCKKQYASKKMLEKHIRRHEG-QDYKCYICGNRYATQKYLEEHIRLH  344 (360)
Q Consensus       292 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~C~~C~~~f~~~~~l~~H~~~h  344 (360)
                      |+||.|+ ||+.|.....|..|+++|+| +||+|++||+.|.+.+.|..|+++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            6899995 99999999999999999999 7999999999999999999999987

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=1e-12  Score=74.83  Aligned_cols=35  Identities=31%  Similarity=0.642  Sum_probs=17.2

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhcC
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEG  319 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  319 (360)
                      |+++|++++||.|++||++|...+.|..|+++|+|
T Consensus         3 H~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtG   37 (38)
T d2cota2           3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG   37 (38)
T ss_dssp             CCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCC
T ss_pred             cCcccCCCCCEecCCCCceeeCHHHHHHhCccCCC
Confidence            44444555555555454444444444444444444

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=8.8e-13  Score=75.09  Aligned_cols=36  Identities=28%  Similarity=0.613  Sum_probs=34.0

Q ss_pred             HHHhhhcC-CcccccccccccCChHHHHHHHHHhCCC
Q psy6525         312 KHIRRHEG-QDYKCYICGNRYATQKYLEEHIRLHQGH  347 (360)
Q Consensus       312 ~H~~~h~~-~~~~C~~C~~~f~~~~~l~~H~~~h~g~  347 (360)
                      +|+++|++ +||+|++||++|.+.++|..|+++|+|+
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            48889998 7999999999999999999999999996

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.20  E-value=3e-12  Score=71.76  Aligned_cols=34  Identities=26%  Similarity=0.688  Sum_probs=20.0

Q ss_pred             hhhcCCCccccccchhhhcCHHHHHHHHhhhcCC
Q psy6525         287 QRHEEPNKYQCAMCKKQYASKKMLEKHIRRHEGQ  320 (360)
Q Consensus       287 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~  320 (360)
                      |+|+|++||.|.+||++|...+.|..|+++|+++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            3455666666666666666666666666655554

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.20  E-value=3.9e-12  Score=72.15  Aligned_cols=36  Identities=22%  Similarity=0.428  Sum_probs=23.0

Q ss_pred             CCcccccccccccCChhHHHHhHh-hhcCCCcccccc
Q psy6525         264 LEVHECNLCAKLFACKRSLQDHMQ-RHEEPNKYQCAM  299 (360)
Q Consensus       264 ~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~  299 (360)
                      ++||.|.+||+.|...++|..|++ +|+|++||.|++
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            456666666666666666666654 466666666653

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.19  E-value=5.1e-12  Score=71.63  Aligned_cols=34  Identities=29%  Similarity=0.757  Sum_probs=22.6

Q ss_pred             CCcccccccccccCChHHHHHHHH-HhCCC-CccCC
Q psy6525         319 GQDYKCYICGNRYATQKYLEEHIR-LHQGH-TYMCN  352 (360)
Q Consensus       319 ~~~~~C~~C~~~f~~~~~l~~H~~-~h~g~-~~~C~  352 (360)
                      ++||+|.+||+.|.+.++|..|++ +|+|+ ||.|.
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            356677777777777777777764 56666 67665

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=7.3e-12  Score=68.10  Aligned_cols=30  Identities=30%  Similarity=0.666  Sum_probs=12.4

Q ss_pred             hcCCCccccccchhhhcCHHHHHHHHhhhc
Q psy6525         289 HEEPNKYQCAMCKKQYASKKMLEKHIRRHE  318 (360)
Q Consensus       289 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  318 (360)
                      |+|++||.|..||++|...+.|..|+++|+
T Consensus         2 HTgekpy~C~~Cgk~F~~~~~L~~H~r~Ht   31 (33)
T d1x6ea1           2 HSGEKPYGCVECGKAFSRSSILVQHQRVHT   31 (33)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHHGGG
T ss_pred             cCCCCCeeCCCCCCEeCchHHhHhhccccC
Confidence            334444444444444444444444444443

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=7.9e-12  Score=67.96  Aligned_cols=32  Identities=34%  Similarity=0.801  Sum_probs=30.1

Q ss_pred             hhcC-CcccccccccccCChHHHHHHHHHhCCC
Q psy6525         316 RHEG-QDYKCYICGNRYATQKYLEEHIRLHQGH  347 (360)
Q Consensus       316 ~h~~-~~~~C~~C~~~f~~~~~l~~H~~~h~g~  347 (360)
                      +|++ +||+|.+||++|.+.++|..|+++|+|+
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            4788 7999999999999999999999999996

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.14  E-value=5.8e-12  Score=71.08  Aligned_cols=34  Identities=21%  Similarity=0.490  Sum_probs=20.4

Q ss_pred             hHhhhcCCCccccccchhhhcCHHHHHHHHhhhc
Q psy6525         285 HMQRHEEPNKYQCAMCKKQYASKKMLEKHIRRHE  318 (360)
Q Consensus       285 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  318 (360)
                      |.|+|+|++||+|++|+++|.+++.|..|+++|.
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCc
Confidence            4555666666666666666666666666665553

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.12  E-value=1.3e-11  Score=69.11  Aligned_cols=35  Identities=23%  Similarity=0.649  Sum_probs=32.3

Q ss_pred             hhhcC-CcccccccccccCChHHHHHHHHHhCCCCc
Q psy6525         315 RRHEG-QDYKCYICGNRYATQKYLEEHIRLHQGHTY  349 (360)
Q Consensus       315 ~~h~~-~~~~C~~C~~~f~~~~~l~~H~~~h~g~~~  349 (360)
                      |+|+| +||+|.+||++|.+.++|..|+++|+++.|
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~~f   36 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNF   36 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSC
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCCCC
Confidence            57898 799999999999999999999999998754

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.08  E-value=2.1e-11  Score=63.45  Aligned_cols=27  Identities=33%  Similarity=0.790  Sum_probs=19.1

Q ss_pred             CcccccccccccCChHHHHHHHHHhCC
Q psy6525         320 QDYKCYICGNRYATQKYLEEHIRLHQG  346 (360)
Q Consensus       320 ~~~~C~~C~~~f~~~~~l~~H~~~h~g  346 (360)
                      +||+|++|++.|.++++|..|+++|+|
T Consensus         2 KPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           2 KPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             cCccCCCCcCEecccccccccCCCccC
Confidence            567777777777777777777777765

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.08  E-value=2.8e-11  Score=63.84  Aligned_cols=28  Identities=29%  Similarity=0.675  Sum_probs=21.8

Q ss_pred             CcccccccccccCChHHHHHHHHHhCCC
Q psy6525         320 QDYKCYICGNRYATQKYLEEHIRLHQGH  347 (360)
Q Consensus       320 ~~~~C~~C~~~f~~~~~l~~H~~~h~g~  347 (360)
                      +||+|++||+.|.+.+.|..|+++|+|+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgE   28 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSS
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCC
Confidence            4777888888888888888888888775

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.06  E-value=2.5e-11  Score=68.40  Aligned_cols=34  Identities=21%  Similarity=0.426  Sum_probs=32.0

Q ss_pred             HHhhhcC-CcccccccccccCChHHHHHHHHHhCC
Q psy6525         313 HIRRHEG-QDYKCYICGNRYATQKYLEEHIRLHQG  346 (360)
Q Consensus       313 H~~~h~~-~~~~C~~C~~~f~~~~~l~~H~~~h~g  346 (360)
                      |.|+|+| +||+|++|+++|.++++|..|+++|.+
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            6789999 799999999999999999999999975

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.04  E-value=3.5e-11  Score=66.31  Aligned_cols=31  Identities=16%  Similarity=0.529  Sum_probs=16.0

Q ss_pred             hcCCCccccccchhhhcCHHHHHHHHhhhcC
Q psy6525         289 HEEPNKYQCAMCKKQYASKKMLEKHIRRHEG  319 (360)
Q Consensus       289 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  319 (360)
                      |+|++||+|++|++.|.+.+.|..|+++|++
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~   32 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTS
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCC
Confidence            3455555555555555555555555555543

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.02  E-value=4.1e-11  Score=66.86  Aligned_cols=30  Identities=20%  Similarity=0.625  Sum_probs=17.2

Q ss_pred             hhcCCCccccccchhhhcCHHHHHHHHhhh
Q psy6525         288 RHEEPNKYQCAMCKKQYASKKMLEKHIRRH  317 (360)
Q Consensus       288 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h  317 (360)
                      +|+|++||+|++|++.|+..+.|..|++.+
T Consensus         2 ~HTgekP~~C~~C~k~F~~~~~L~~H~~~~   31 (36)
T d2ct1a2           2 THSGEKPYECYICHARFTQSGTMKMHILQK   31 (36)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHHHH
T ss_pred             ccCCCCCEeCCCCcccccchHHHHHHcccc
Confidence            455566666666665555555555555443

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.02  E-value=6.9e-11  Score=62.13  Aligned_cols=28  Identities=29%  Similarity=0.679  Sum_probs=22.2

Q ss_pred             CcccccccccccCChHHHHHHHHHhCCC
Q psy6525         320 QDYKCYICGNRYATQKYLEEHIRLHQGH  347 (360)
Q Consensus       320 ~~~~C~~C~~~f~~~~~l~~H~~~h~g~  347 (360)
                      +||.|++||+.|.++++|..|+++|+|+
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~Htge   28 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNK   28 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCc
Confidence            4778888888888888888888888875

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.00  E-value=5.6e-11  Score=61.78  Aligned_cols=28  Identities=32%  Similarity=0.845  Sum_probs=19.1

Q ss_pred             CCccccccchhhhcCHHHHHHHHhhhcC
Q psy6525         292 PNKYQCAMCKKQYASKKMLEKHIRRHEG  319 (360)
Q Consensus       292 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~  319 (360)
                      |+||+|++|+++|...+.|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            4667777777777777777777776664

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.94  E-value=1.8e-10  Score=63.35  Aligned_cols=32  Identities=22%  Similarity=0.527  Sum_probs=29.6

Q ss_pred             hcCCCcccccccccccCChhHHHHhHhhhcCC
Q psy6525         261 HQGLEVHECNLCAKLFACKRSLQDHMQRHEEP  292 (360)
Q Consensus       261 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  292 (360)
                      |+|++||.|.+|++.|.++++|.+|+++|++.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            68999999999999999999999999999875

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.92  E-value=1.9e-10  Score=64.08  Aligned_cols=33  Identities=33%  Similarity=0.779  Sum_probs=29.2

Q ss_pred             hhhcC-CcccccccccccCChHHHHHHHHHhCCC
Q psy6525         315 RRHEG-QDYKCYICGNRYATQKYLEEHIRLHQGH  347 (360)
Q Consensus       315 ~~h~~-~~~~C~~C~~~f~~~~~l~~H~~~h~g~  347 (360)
                      |+|+| +||+|++|++.|.++++|..|++.++++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            57898 7999999999999999999998776654

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.92  E-value=2.5e-10  Score=60.06  Aligned_cols=26  Identities=27%  Similarity=0.815  Sum_probs=11.1

Q ss_pred             ccccccchhhhcCHHHHHHHHhhhcC
Q psy6525         294 KYQCAMCKKQYASKKMLEKHIRRHEG  319 (360)
Q Consensus       294 ~~~C~~C~~~f~~~~~L~~H~~~h~~  319 (360)
                      ||.|++|+++|...+.|..|+++|+|
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~r~HTg   27 (29)
T d2adra1           2 SFVCEVCTRAFARQEHLKRHYRSHTN   27 (29)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTS
T ss_pred             cCCCCCCCCCCCCchHcccccCcccC
Confidence            34444444444444444444444443

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.91  E-value=3.5e-10  Score=59.74  Aligned_cols=28  Identities=32%  Similarity=0.713  Sum_probs=22.1

Q ss_pred             Ccccccc--cccccCChHHHHHHHHHhCCC
Q psy6525         320 QDYKCYI--CGNRYATQKYLEEHIRLHQGH  347 (360)
Q Consensus       320 ~~~~C~~--C~~~f~~~~~l~~H~~~h~g~  347 (360)
                      +||+|++  |++.|.+.++|..|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            4778877  888888888888888888875

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.88  E-value=2.9e-10  Score=57.42  Aligned_cols=26  Identities=35%  Similarity=0.791  Sum_probs=16.8

Q ss_pred             CcccccccccccCChHHHHHHHHHhC
Q psy6525         320 QDYKCYICGNRYATQKYLEEHIRLHQ  345 (360)
Q Consensus       320 ~~~~C~~C~~~f~~~~~l~~H~~~h~  345 (360)
                      +||+|..||+.|.+.+.|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            36666666666666666666666664

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.88  E-value=3.5e-10  Score=62.79  Aligned_cols=32  Identities=34%  Similarity=0.808  Sum_probs=18.5

Q ss_pred             ccccc--cccccCChhHHHHhHhhhcCCCccccc
Q psy6525         267 HECNL--CAKLFACKRSLQDHMQRHEEPNKYQCA  298 (360)
Q Consensus       267 ~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~  298 (360)
                      |.|+.  |+++|.++..|++|+++|+|++||.|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            44544  566666666666666666666666554

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.88  E-value=3.6e-10  Score=59.83  Aligned_cols=28  Identities=32%  Similarity=0.911  Sum_probs=21.3

Q ss_pred             Ccccccc--cccccCChHHHHHHHHHhCCC
Q psy6525         320 QDYKCYI--CGNRYATQKYLEEHIRLHQGH  347 (360)
Q Consensus       320 ~~~~C~~--C~~~f~~~~~l~~H~~~h~g~  347 (360)
                      +||+|++  ||+.|.+.++|..|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            4777776  777787777788887777775

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.88  E-value=5e-10  Score=58.77  Aligned_cols=27  Identities=26%  Similarity=0.556  Sum_probs=12.9

Q ss_pred             cccccccccccCChhHHHHhHhhhcCC
Q psy6525         266 VHECNLCAKLFACKRSLQDHMQRHEEP  292 (360)
Q Consensus       266 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  292 (360)
                      ||.|++|+++|..++.|.+|+++|+|+
T Consensus         2 py~C~~C~k~F~~~s~L~~H~r~Htge   28 (29)
T d1sp1a_           2 KFACPECPKRFMRSDHLSKHIKTHQNK   28 (29)
T ss_dssp             CSCCTTTTCCCSCSHHHHHHHHGGGCC
T ss_pred             CEECCcCCCeecchHHhhhhcCccCCc
Confidence            444444444444444444444444443

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.82  E-value=9.2e-11  Score=69.66  Aligned_cols=31  Identities=19%  Similarity=0.554  Sum_probs=14.4

Q ss_pred             hcCCCcccccc--chhhhcCHHHHHHHHhhhcC
Q psy6525         289 HEEPNKYQCAM--CKKQYASKKMLEKHIRRHEG  319 (360)
Q Consensus       289 h~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~  319 (360)
                      |++++||.|++  |+++|...+.|..|+++|+|
T Consensus        13 h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htg   45 (47)
T d1ncsa_          13 EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLE   45 (47)
T ss_dssp             EETTTEEECCCTTCCCEECSSSSHHHHHHHHTT
T ss_pred             ccCCCCeECCcCCCCccccCchHHHhhcccccC
Confidence            44444444443  44444444444444444443

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.82  E-value=7.4e-10  Score=61.42  Aligned_cols=31  Identities=35%  Similarity=0.939  Sum_probs=21.3

Q ss_pred             ccccc--cccccCChHHHHHHHHHhCCC-CccCC
Q psy6525         322 YKCYI--CGNRYATQKYLEEHIRLHQGH-TYMCN  352 (360)
Q Consensus       322 ~~C~~--C~~~f~~~~~l~~H~~~h~g~-~~~C~  352 (360)
                      |.|++  ||+.|.++..|.+|+++|+|+ ||.|.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            55665  777777777777777777776 67664

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.79  E-value=7.9e-10  Score=55.79  Aligned_cols=26  Identities=31%  Similarity=0.634  Sum_probs=17.4

Q ss_pred             CccccccchhhhcCHHHHHHHHhhhc
Q psy6525         293 NKYQCAMCKKQYASKKMLEKHIRRHE  318 (360)
Q Consensus       293 ~~~~C~~C~~~f~~~~~L~~H~~~h~  318 (360)
                      +||.|..|||+|...+.|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            46666666666666666666666663

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.75  E-value=3e-10  Score=67.38  Aligned_cols=40  Identities=23%  Similarity=0.428  Sum_probs=34.1

Q ss_pred             HHHHHHHHhcCCCcccccc--cccccCChhHHHHhHhhhcCCC
Q psy6525         253 HYLRHMRIHQGLEVHECNL--CAKLFACKRSLQDHMQRHEEPN  293 (360)
Q Consensus       253 ~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~  293 (360)
                      .|..|+. |.|++||.|.+  |+++|...++|..|+++|+|++
T Consensus         6 ~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           6 SIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            3455664 89999999987  9999999999999999999875

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.72  E-value=2.8e-09  Score=56.87  Aligned_cols=28  Identities=32%  Similarity=0.796  Sum_probs=19.2

Q ss_pred             Cccccc--ccccccCChHHHHHHHHHhCCC
Q psy6525         320 QDYKCY--ICGNRYATQKYLEEHIRLHQGH  347 (360)
Q Consensus       320 ~~~~C~--~C~~~f~~~~~l~~H~~~h~g~  347 (360)
                      +||+|+  .|++.|.+.++|..|+++|+|+
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~Htge   30 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCccccc
Confidence            367774  3777777777777777777765

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.71  E-value=2.9e-09  Score=56.11  Aligned_cols=27  Identities=33%  Similarity=0.833  Sum_probs=16.5

Q ss_pred             Ccccccc--chhhhcCHHHHHHHHhhhcC
Q psy6525         293 NKYQCAM--CKKQYASKKMLEKHIRRHEG  319 (360)
Q Consensus       293 ~~~~C~~--C~~~f~~~~~L~~H~~~h~~  319 (360)
                      +||.|++  |+++|.+.+.|..|+++|+|
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtG   29 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTG   29 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTT
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcC
Confidence            4566655  66666666666666666655

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.68  E-value=4.7e-09  Score=49.98  Aligned_cols=26  Identities=35%  Similarity=0.823  Sum_probs=20.6

Q ss_pred             cccccccccccCChHHHHHHHHHhCC
Q psy6525         321 DYKCYICGNRYATQKYLEEHIRLHQG  346 (360)
Q Consensus       321 ~~~C~~C~~~f~~~~~l~~H~~~h~g  346 (360)
                      |++|+.|++.|+++..|..||+.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            56788888888888888888888876

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.68  E-value=3.1e-09  Score=56.15  Aligned_cols=27  Identities=33%  Similarity=0.794  Sum_probs=16.4

Q ss_pred             Ccccccc--chhhhcCHHHHHHHHhhhcC
Q psy6525         293 NKYQCAM--CKKQYASKKMLEKHIRRHEG  319 (360)
Q Consensus       293 ~~~~C~~--C~~~f~~~~~L~~H~~~h~~  319 (360)
                      +||.|++  |+++|.+.+.|..|+++|+|
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTG   29 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTG   29 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCC
Confidence            4566655  66666666666666666655

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.66  E-value=3.4e-09  Score=55.34  Aligned_cols=27  Identities=37%  Similarity=0.909  Sum_probs=17.8

Q ss_pred             Ccccccc--cccccCChHHHHHHHHHhCC
Q psy6525         320 QDYKCYI--CGNRYATQKYLEEHIRLHQG  346 (360)
Q Consensus       320 ~~~~C~~--C~~~f~~~~~l~~H~~~h~g  346 (360)
                      +||+|++  |++.|.+.++|..|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            3566655  66666666666666666665

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.52  E-value=1.3e-08  Score=53.12  Aligned_cols=27  Identities=33%  Similarity=0.876  Sum_probs=18.6

Q ss_pred             Ccccccc--chhhhcCHHHHHHHHhhhcC
Q psy6525         293 NKYQCAM--CKKQYASKKMLEKHIRRHEG  319 (360)
Q Consensus       293 ~~~~C~~--C~~~f~~~~~L~~H~~~h~~  319 (360)
                      +||.|++  |+++|.+.+.|..|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            4677766  77777777777777777664

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.51  E-value=2.2e-08  Score=53.54  Aligned_cols=25  Identities=28%  Similarity=0.586  Sum_probs=11.3

Q ss_pred             cccccc--cccccCChHHHHHHHHHhC
Q psy6525         321 DYKCYI--CGNRYATQKYLEEHIRLHQ  345 (360)
Q Consensus       321 ~~~C~~--C~~~f~~~~~l~~H~~~h~  345 (360)
                      ||.|++  |++.|++.++|..|+++|+
T Consensus         3 P~~C~~pgC~k~F~r~~~L~~H~r~Ht   29 (32)
T d1zfda_           3 PYSCDHPGCDKAFVRNHDLIRHKKSHQ   29 (32)
T ss_dssp             SBCCCCTTCCCCBSSSHHHHHHHGGGT
T ss_pred             CeECcCCCCCCeeCCHHHHHHHhhhcc
Confidence            444444  4444444444444444444

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.50  E-value=1.7e-08  Score=51.97  Aligned_cols=26  Identities=31%  Similarity=0.715  Sum_probs=17.7

Q ss_pred             Ccccccc--cccccCChHHHHHHHHHhC
Q psy6525         320 QDYKCYI--CGNRYATQKYLEEHIRLHQ  345 (360)
Q Consensus       320 ~~~~C~~--C~~~f~~~~~l~~H~~~h~  345 (360)
                      +||+|++  ||+.|++.++|..|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            3666766  7777777777777777664

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.50  E-value=3.6e-08  Score=52.68  Aligned_cols=29  Identities=24%  Similarity=0.622  Sum_probs=27.1

Q ss_pred             CCcccccc--chhhhcCHHHHHHHHhhhcCC
Q psy6525         292 PNKYQCAM--CKKQYASKKMLEKHIRRHEGQ  320 (360)
Q Consensus       292 ~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~  320 (360)
                      ++||.|++  |+++|++.+.|.+|+++|+.+
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            68999998  999999999999999999864

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.49  E-value=3.4e-08  Score=52.52  Aligned_cols=20  Identities=35%  Similarity=0.808  Sum_probs=8.8

Q ss_pred             chhhhcCHHHHHHHHhhhcC
Q psy6525         300 CKKQYASKKMLEKHIRRHEG  319 (360)
Q Consensus       300 C~~~f~~~~~L~~H~~~h~~  319 (360)
                      |+++|.+.+.|..|+++|+|
T Consensus        10 C~k~F~~~~~L~~H~r~Htg   29 (31)
T d1sp2a_          10 CGKRFTRSDELQRHKRTHTG   29 (31)
T ss_dssp             CCCBCSSHHHHHHHHTTTSC
T ss_pred             CCcCcCChhHhhhhcCcccc
Confidence            44444444444444444443

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.39  E-value=6.8e-08  Score=45.91  Aligned_cols=26  Identities=35%  Similarity=0.770  Sum_probs=16.8

Q ss_pred             ccccccchhhhcCHHHHHHHHhhhcC
Q psy6525         294 KYQCAMCKKQYASKKMLEKHIRRHEG  319 (360)
Q Consensus       294 ~~~C~~C~~~f~~~~~L~~H~~~h~~  319 (360)
                      |.+|++|++.|+++..|..|+|.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            45666666666666666666666654

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.36  E-value=3.1e-08  Score=50.96  Aligned_cols=26  Identities=35%  Similarity=0.782  Sum_probs=14.9

Q ss_pred             Ccccccc--chhhhcCHHHHHHHHhhhc
Q psy6525         293 NKYQCAM--CKKQYASKKMLEKHIRRHE  318 (360)
Q Consensus       293 ~~~~C~~--C~~~f~~~~~L~~H~~~h~  318 (360)
                      +||.|++  |+++|++.+.|..|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            3555655  6666666666666665553

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.28  E-value=2.7e-07  Score=46.09  Aligned_cols=28  Identities=32%  Similarity=0.833  Sum_probs=21.7

Q ss_pred             CcccccccccccCChHHHHHHHHHhCCC
Q psy6525         320 QDYKCYICGNRYATQKYLEEHIRLHQGH  347 (360)
Q Consensus       320 ~~~~C~~C~~~f~~~~~l~~H~~~h~g~  347 (360)
                      +||.|++|+..|+++..+..|++.|.|.
T Consensus         2 kp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           2 KPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCcccchHHHHhhccccceEeeecccCc
Confidence            5777888888888888888888877764

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.18  E-value=3.5e-07  Score=45.03  Aligned_cols=24  Identities=29%  Similarity=0.825  Sum_probs=10.9

Q ss_pred             cccccccccccCChHHHHHHHHHh
Q psy6525         321 DYKCYICGNRYATQKYLEEHIRLH  344 (360)
Q Consensus       321 ~~~C~~C~~~f~~~~~l~~H~~~h  344 (360)
                      ||.|.+||+.|.+.....+|.++|
T Consensus         3 Pf~C~~CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           3 PFACDICGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHHGGG
T ss_pred             Ccccchhhhhhhcchhhhhhhhhc
Confidence            444444444444444444444444

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.11  E-value=7.4e-07  Score=43.85  Aligned_cols=26  Identities=19%  Similarity=0.669  Sum_probs=24.6

Q ss_pred             CCccccccchhhhcCHHHHHHHHhhh
Q psy6525         292 PNKYQCAMCKKQYASKKMLEKHIRRH  317 (360)
Q Consensus       292 ~~~~~C~~C~~~f~~~~~L~~H~~~h  317 (360)
                      ++||.|++||+.|.......+|.++|
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGG
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhc
Confidence            58999999999999999999999887

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.10  E-value=7.6e-07  Score=44.41  Aligned_cols=28  Identities=29%  Similarity=0.800  Sum_probs=18.2

Q ss_pred             CCccccccchhhhcCHHHHHHHHhhhcC
Q psy6525         292 PNKYQCAMCKKQYASKKMLEKHIRRHEG  319 (360)
Q Consensus       292 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~  319 (360)
                      ++||.|++|+..|.++..+..|.+.|.|
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CCCcccchHHHHhhccccceEeeecccC
Confidence            3566666666666666666666666655

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.06  E-value=9.7e-07  Score=42.99  Aligned_cols=27  Identities=33%  Similarity=0.659  Sum_probs=16.9

Q ss_pred             CcccccccccccCChHHHHHHHHHhCC
Q psy6525         320 QDYKCYICGNRYATQKYLEEHIRLHQG  346 (360)
Q Consensus       320 ~~~~C~~C~~~f~~~~~l~~H~~~h~g  346 (360)
                      +||+|..|.+.-.+.+.|..|++.|+|
T Consensus         2 rpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CcceeeecccccCCchheEEeeecccC
Confidence            456666666666666666666666665

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.04  E-value=1.1e-06  Score=44.86  Aligned_cols=29  Identities=28%  Similarity=0.584  Sum_probs=16.3

Q ss_pred             ccccccccccCChhHHHHhHhhhcCCCcc
Q psy6525         267 HECNLCAKLFACKRSLQDHMQRHEEPNKY  295 (360)
Q Consensus       267 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  295 (360)
                      ..|..||+.|.....|.+|..+|++++||
T Consensus         6 ~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           6 VACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             EEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            44555555555555555555555555554

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.99  E-value=1.8e-06  Score=41.81  Aligned_cols=26  Identities=27%  Similarity=0.598  Sum_probs=20.2

Q ss_pred             ccccccccccCChHHHHHHHHHhCCC
Q psy6525         322 YKCYICGNRYATQKYLEEHIRLHQGH  347 (360)
Q Consensus       322 ~~C~~C~~~f~~~~~l~~H~~~h~g~  347 (360)
                      +.|..||+.|...+.|++|..+|+|+
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccCC
Confidence            56778888888888888888888775

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.98  E-value=1.3e-06  Score=42.52  Aligned_cols=27  Identities=26%  Similarity=0.671  Sum_probs=16.5

Q ss_pred             CccccccchhhhcCHHHHHHHHhhhcC
Q psy6525         293 NKYQCAMCKKQYASKKMLEKHIRRHEG  319 (360)
Q Consensus       293 ~~~~C~~C~~~f~~~~~L~~H~~~h~~  319 (360)
                      +||+|..|.+.-.+.+.|..|+|.|+|
T Consensus         2 rpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CcceeeecccccCCchheEEeeecccC
Confidence            556666666666666666666666654

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.88  E-value=5.2e-06  Score=40.68  Aligned_cols=26  Identities=38%  Similarity=0.678  Sum_probs=19.1

Q ss_pred             ccccccccccCChHHHHHHHHHhCCC
Q psy6525         322 YKCYICGNRYATQKYLEEHIRLHQGH  347 (360)
Q Consensus       322 ~~C~~C~~~f~~~~~l~~H~~~h~g~  347 (360)
                      |.|++||.....++-|..|++.|+|+
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            66777777777777777777777764

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.87  E-value=4e-06  Score=41.86  Aligned_cols=26  Identities=31%  Similarity=0.792  Sum_probs=16.4

Q ss_pred             cccccc--cccccCChHHHHHHHHHhCC
Q psy6525         321 DYKCYI--CGNRYATQKYLEEHIRLHQG  346 (360)
Q Consensus       321 ~~~C~~--C~~~f~~~~~l~~H~~~h~g  346 (360)
                      ||.|.+  |+++++.+++|+.|++.++|
T Consensus         2 PY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           2 PYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            566655  66666666666666666554

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.87  E-value=2e-06  Score=43.95  Aligned_cols=31  Identities=29%  Similarity=0.534  Sum_probs=27.0

Q ss_pred             CcccCCCCCccCCHHHHHHHHHHhcCCCccc
Q psy6525         238 RFKCDLCGKVTPYYQHYLRHMRIHQGLEVHE  268 (360)
Q Consensus       238 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  268 (360)
                      ...|..||+.|.+...|.+|...|++++||.
T Consensus         5 ~~~ce~cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           5 QVACEICGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             SEEETTTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             hhhHHHHHHHHHHHHHHHhhhcccCCCCCCC
Confidence            3569999999999999999999999999873

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.77  E-value=9.1e-06  Score=39.78  Aligned_cols=26  Identities=19%  Similarity=0.351  Sum_probs=13.1

Q ss_pred             ccccccccccCChhHHHHhHhhhcCC
Q psy6525         267 HECNLCAKLFACKRSLQDHMQRHEEP  292 (360)
Q Consensus       267 ~~C~~C~~~f~~~~~l~~H~~~h~~~  292 (360)
                      |.|+.||......+-|+.|+++|+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            44555555555555555555555443

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.63  E-value=1.7e-05  Score=37.09  Aligned_cols=24  Identities=33%  Similarity=0.823  Sum_probs=15.4

Q ss_pred             ccccccccccCChHHHHHHHHHhC
Q psy6525         322 YKCYICGNRYATQKYLEEHIRLHQ  345 (360)
Q Consensus       322 ~~C~~C~~~f~~~~~l~~H~~~h~  345 (360)
                      |+|..|.++|..++.|.+|+++|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            456666666666666666666653

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.62  E-value=1.3e-05  Score=39.99  Aligned_cols=25  Identities=32%  Similarity=0.806  Sum_probs=13.1

Q ss_pred             cccccc--chhhhcCHHHHHHHHhhhc
Q psy6525         294 KYQCAM--CKKQYASKKMLEKHIRRHE  318 (360)
Q Consensus       294 ~~~C~~--C~~~f~~~~~L~~H~~~h~  318 (360)
                      ||.|.+  |+++|...++|+.|++.++
T Consensus         2 PY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           2 PYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CeecccCCCCcccCCHHHHHHHHHhhC
Confidence            455544  5555555555555555443

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.61  E-value=2.2e-05  Score=37.35  Aligned_cols=25  Identities=32%  Similarity=0.764  Sum_probs=18.3

Q ss_pred             cccccccccCChHHHHHHHHHhCCC
Q psy6525         323 KCYICGNRYATQKYLEEHIRLHQGH  347 (360)
Q Consensus       323 ~C~~C~~~f~~~~~l~~H~~~h~g~  347 (360)
                      +|+.|.+.|.++..|..|.+.|+|+
T Consensus         2 qcp~c~k~f~skyylkvhnr~htge   26 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGE   26 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSC
T ss_pred             cCcchHHHHHHhHhhhhccccccCC
Confidence            5777777777777777777777775

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.59  E-value=1.8e-05  Score=38.29  Aligned_cols=24  Identities=29%  Similarity=0.505  Sum_probs=10.6

Q ss_pred             cccccccccCChhHHHHhHhhhcC
Q psy6525         268 ECNLCAKLFACKRSLQDHMQRHEE  291 (360)
Q Consensus       268 ~C~~C~~~f~~~~~l~~H~~~h~~  291 (360)
                      .|..||+.|...+.|++|..+|+|
T Consensus         4 vc~ecgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           4 VCAECGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             ECTTTCCEESSHHHHHHHGGGTSC
T ss_pred             hHHHHhHHHHHHHHHHHHhhcccC
Confidence            344444444444444444444443

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.52  E-value=2.9e-05  Score=37.36  Aligned_cols=26  Identities=35%  Similarity=0.736  Sum_probs=14.7

Q ss_pred             CcccccccccccCChHHHHHHHHHhC
Q psy6525         320 QDYKCYICGNRYATQKYLEEHIRLHQ  345 (360)
Q Consensus       320 ~~~~C~~C~~~f~~~~~l~~H~~~h~  345 (360)
                      +||+|..|.+.-...++|..|+|+|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            35555555555555555555555553

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.48  E-value=4.2e-05  Score=37.55  Aligned_cols=27  Identities=30%  Similarity=0.621  Sum_probs=19.2

Q ss_pred             CcccccccccccCChHHHHHHHHHhCC
Q psy6525         320 QDYKCYICGNRYATQKYLEEHIRLHQG  346 (360)
Q Consensus       320 ~~~~C~~C~~~f~~~~~l~~H~~~h~g  346 (360)
                      +||+|.+|.......++|..|+++.++
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhs   27 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             CCccccccccccccchhhhhhhhcccc
Confidence            367777777777777777777776554

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.48  E-value=4e-05  Score=36.44  Aligned_cols=19  Identities=37%  Similarity=0.571  Sum_probs=6.8

Q ss_pred             ccccccCChhHHHHhHhhh
Q psy6525         271 LCAKLFACKRSLQDHMQRH  289 (360)
Q Consensus       271 ~C~~~f~~~~~l~~H~~~h  289 (360)
                      .|.+.|.++.-|+.|-+.|
T Consensus         5 ~c~k~f~skyylkvhnr~h   23 (27)
T d2dlqa4           5 TCHKKFLSKYYLKVHNRKH   23 (27)
T ss_dssp             TTCCCCSSHHHHHHHHHHH
T ss_pred             chHHHHHHhHhhhhccccc
Confidence            3333333333333333333

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.38  E-value=4.3e-05  Score=36.76  Aligned_cols=25  Identities=28%  Similarity=0.473  Sum_probs=12.3

Q ss_pred             CcccccccccccCChhHHHHhHhhh
Q psy6525         265 EVHECNLCAKLFACKRSLQDHMQRH  289 (360)
Q Consensus       265 ~~~~C~~C~~~f~~~~~l~~H~~~h  289 (360)
                      +||+|..|.+.-...++|..|+|+|
T Consensus         2 kp~kck~cdyaaadsssl~kh~rih   26 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIH   26 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHS
T ss_pred             CCcccccccchhcchhhHhhhhhcc
Confidence            3445555555545555555554444

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.38  E-value=4.8e-05  Score=35.53  Aligned_cols=23  Identities=35%  Similarity=0.976  Sum_probs=12.6

Q ss_pred             cccccchhhhcCHHHHHHHHhhh
Q psy6525         295 YQCAMCKKQYASKKMLEKHIRRH  317 (360)
Q Consensus       295 ~~C~~C~~~f~~~~~L~~H~~~h  317 (360)
                      |+|..|.++|..+++|.+|++.|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            44555555555555555555554

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.32  E-value=4.9e-05  Score=37.12  Aligned_cols=23  Identities=26%  Similarity=0.661  Sum_probs=18.7

Q ss_pred             cccccccccccCChHHHHHHHHH
Q psy6525         321 DYKCYICGNRYATQKYLEEHIRL  343 (360)
Q Consensus       321 ~~~C~~C~~~f~~~~~l~~H~~~  343 (360)
                      ||.|..|+..|+++.+|..||+.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            67788888888888888888875

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.29  E-value=6.6e-05  Score=36.79  Aligned_cols=27  Identities=22%  Similarity=0.561  Sum_probs=18.3

Q ss_pred             CcccccccccccCChHHHHHHHHHhCC
Q psy6525         320 QDYKCYICGNRYATQKYLEEHIRLHQG  346 (360)
Q Consensus       320 ~~~~C~~C~~~f~~~~~l~~H~~~h~g  346 (360)
                      +||+|++|...-++.++|..|++.-+|
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            367777777777777777777765544

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.28  E-value=0.00011  Score=35.81  Aligned_cols=27  Identities=22%  Similarity=0.579  Sum_probs=18.3

Q ss_pred             cccccccccccCChHHHHHHHHHhCCC
Q psy6525         321 DYKCYICGNRYATQKYLEEHIRLHQGH  347 (360)
Q Consensus       321 ~~~C~~C~~~f~~~~~l~~H~~~h~g~  347 (360)
                      .|.|..|...|.+.-.|+.||-.|+|+
T Consensus         4 vftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           4 VFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             eEEeHHHHHHHHHHHhheeeeecccCC
Confidence            466777777777777777777777664

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.18  E-value=8.9e-05  Score=40.04  Aligned_cols=25  Identities=40%  Similarity=0.847  Sum_probs=16.2

Q ss_pred             CCCcccccccccccCChhHHHHhHh
Q psy6525         263 GLEVHECNLCAKLFACKRSLQDHMQ  287 (360)
Q Consensus       263 ~~~~~~C~~C~~~f~~~~~l~~H~~  287 (360)
                      |.+||.|.+|++.|.++.++.+|..
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHhhh
Confidence            5566666666666666666666653

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.14  E-value=0.00014  Score=35.36  Aligned_cols=24  Identities=29%  Similarity=0.648  Sum_probs=9.9

Q ss_pred             ccccccccccCChhHHHHhHhhhc
Q psy6525         267 HECNLCAKLFACKRSLQDHMQRHE  290 (360)
Q Consensus       267 ~~C~~C~~~f~~~~~l~~H~~~h~  290 (360)
                      |.|..|...|..+..|+.|+-+|+
T Consensus         5 ftcs~cqe~f~rrmelr~hmvsht   28 (30)
T d2dlqa3           5 FTCSVCQETFRRRMELRLHMVSHT   28 (30)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHS
T ss_pred             EEeHHHHHHHHHHHhheeeeeccc
Confidence            334444444444444444444443

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.04  E-value=0.00014  Score=35.33  Aligned_cols=24  Identities=33%  Similarity=0.567  Sum_probs=14.6

Q ss_pred             cccccc--cccccCChhHHHHhHhhh
Q psy6525         266 VHECNL--CAKLFACKRSLQDHMQRH  289 (360)
Q Consensus       266 ~~~C~~--C~~~f~~~~~l~~H~~~h  289 (360)
                      ||.|+.  |++.|+..+.|++|.++|
T Consensus         3 py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           3 PYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CccCCccCccccccCHHHHhhhhhcc
Confidence            556654  666666666666666554

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.00  E-value=0.00018  Score=38.74  Aligned_cols=23  Identities=35%  Similarity=0.914  Sum_probs=10.6

Q ss_pred             cccccchhhhcCHHHHHHHHhhh
Q psy6525         295 YQCAMCKKQYASKKMLEKHIRRH  317 (360)
Q Consensus       295 ~~C~~C~~~f~~~~~L~~H~~~h  317 (360)
                      |.|.+|++.|.+..+|--|++.|
T Consensus         6 ~~C~~C~k~F~s~qALGGH~~~H   28 (37)
T d1njqa_           6 YTCSFCKREFRSAQALGGHMNVH   28 (37)
T ss_dssp             EECTTTCCEESSHHHHHHHHHTT
T ss_pred             cCCCCCCCccCCcccccchHhhh
Confidence            44444444444444444444444

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.99  E-value=0.00018  Score=34.99  Aligned_cols=24  Identities=29%  Similarity=0.776  Sum_probs=13.1

Q ss_pred             cccccc--chhhhcCHHHHHHHHhhh
Q psy6525         294 KYQCAM--CKKQYASKKMLEKHIRRH  317 (360)
Q Consensus       294 ~~~C~~--C~~~f~~~~~L~~H~~~h  317 (360)
                      ||.|+.  |++.|+..+.|++|.++|
T Consensus         3 py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           3 PYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CccCCccCccccccCHHHHhhhhhcc
Confidence            555543  555555555555555544

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.97  E-value=0.00023  Score=38.26  Aligned_cols=28  Identities=25%  Similarity=0.589  Sum_probs=17.5

Q ss_pred             CcccccccccccCChhHHHHhHhhhcCC
Q psy6525         265 EVHECNLCAKLFACKRSLQDHMQRHEEP  292 (360)
Q Consensus       265 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  292 (360)
                      +.|.|.+|++.|.+..+|--|++.|..+
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~   31 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRD   31 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCS
T ss_pred             CccCCCCCCCccCCcccccchHhhhcch
Confidence            4466666666666666666666666543

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.94  E-value=0.00022  Score=34.96  Aligned_cols=23  Identities=35%  Similarity=0.716  Sum_probs=12.9

Q ss_pred             ccccccchhhhcCHHHHHHHHhh
Q psy6525         294 KYQCAMCKKQYASKKMLEKHIRR  316 (360)
Q Consensus       294 ~~~C~~C~~~f~~~~~L~~H~~~  316 (360)
                      ||+|.+|.......++|..|+++
T Consensus         2 py~cqyc~yrsadssnlkthikt   24 (30)
T d1klra_           2 TYQCQYCEFRSADSSNLKTHIKT   24 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHH
T ss_pred             Cccccccccccccchhhhhhhhc
Confidence            55555555555555555555554

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.93  E-value=0.00015  Score=35.40  Aligned_cols=23  Identities=30%  Similarity=0.778  Sum_probs=19.0

Q ss_pred             ccccccchhhhcCHHHHHHHHhh
Q psy6525         294 KYQCAMCKKQYASKKMLEKHIRR  316 (360)
Q Consensus       294 ~~~C~~C~~~f~~~~~L~~H~~~  316 (360)
                      ||.|..|+..|.++++|..||+.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            67888888888888888888875

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.88  E-value=0.00024  Score=35.65  Aligned_cols=26  Identities=27%  Similarity=0.768  Sum_probs=19.6

Q ss_pred             cccccccccccCChHHHHHHHH-HhCC
Q psy6525         321 DYKCYICGNRYATQKYLEEHIR-LHQG  346 (360)
Q Consensus       321 ~~~C~~C~~~f~~~~~l~~H~~-~h~g  346 (360)
                      ||.|.+|++.|.+..-|.+|.. .|.|
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            6788888888888888888865 3444

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.87  E-value=0.00018  Score=36.04  Aligned_cols=26  Identities=27%  Similarity=0.952  Sum_probs=19.4

Q ss_pred             ccccccchhhhcCHHHHHHHHhh-hcC
Q psy6525         294 KYQCAMCKKQYASKKMLEKHIRR-HEG  319 (360)
Q Consensus       294 ~~~C~~C~~~f~~~~~L~~H~~~-h~~  319 (360)
                      ||.|.+|++.|+++..|.+|.+. |.|
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            67788888888888888888764 443

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.83  E-value=0.00025  Score=34.67  Aligned_cols=25  Identities=20%  Similarity=0.572  Sum_probs=16.4

Q ss_pred             CccccccchhhhcCHHHHHHHHhhh
Q psy6525         293 NKYQCAMCKKQYASKKMLEKHIRRH  317 (360)
Q Consensus       293 ~~~~C~~C~~~f~~~~~L~~H~~~h  317 (360)
                      +||+|++|.......++|..|++.-
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~   25 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKF   25 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHHHH
Confidence            4666666666666666676666653

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.82  E-value=0.0003  Score=34.34  Aligned_cols=27  Identities=22%  Similarity=0.532  Sum_probs=16.5

Q ss_pred             cccccc--cccccCChHHHHHHHHHhCCC
Q psy6525         321 DYKCYI--CGNRYATQKYLEEHIRLHQGH  347 (360)
Q Consensus       321 ~~~C~~--C~~~f~~~~~l~~H~~~h~g~  347 (360)
                      ||.|.+  |.+.|.+...|.+|..+|+|+
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CcCcccccccccchhhhhhhhhhccccCC
Confidence            455533  666666666666666666664

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.71  E-value=0.00037  Score=37.57  Aligned_cols=25  Identities=20%  Similarity=0.703  Sum_probs=14.2

Q ss_pred             CCCccccccchhhhcCHHHHHHHHh
Q psy6525         291 EPNKYQCAMCKKQYASKKMLEKHIR  315 (360)
Q Consensus       291 ~~~~~~C~~C~~~f~~~~~L~~H~~  315 (360)
                      |-+||.|.+|+|.|-...++.+|..
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHhhh
Confidence            4455666666666665555555543

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.66  E-value=0.00045  Score=32.16  Aligned_cols=22  Identities=32%  Similarity=0.765  Sum_probs=19.1

Q ss_pred             cccccccccccCChHHHHHHHH
Q psy6525         321 DYKCYICGNRYATQKYLEEHIR  342 (360)
Q Consensus       321 ~~~C~~C~~~f~~~~~l~~H~~  342 (360)
                      ||+|+-|...|.++..|..||-
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            7889999999999999988874

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.60  E-value=0.00073  Score=32.26  Aligned_cols=23  Identities=30%  Similarity=0.587  Sum_probs=18.8

Q ss_pred             cccccccccccCChHHHHHHHHH
Q psy6525         321 DYKCYICGNRYATQKYLEEHIRL  343 (360)
Q Consensus       321 ~~~C~~C~~~f~~~~~l~~H~~~  343 (360)
                      ||+|..||+.+-++.+|.+|...
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            68888888888888888888653

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.58  E-value=0.00057  Score=36.36  Aligned_cols=26  Identities=19%  Similarity=0.605  Sum_probs=14.8

Q ss_pred             CCcccc--ccchhhhcCHHHHHHHHhhh
Q psy6525         292 PNKYQC--AMCKKQYASKKMLEKHIRRH  317 (360)
Q Consensus       292 ~~~~~C--~~C~~~f~~~~~L~~H~~~h  317 (360)
                      ++||.|  +-|+.+|.+...|..|...|
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH   31 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKH   31 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhh
Confidence            455666  33666666666666665554

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.55  E-value=0.00058  Score=33.29  Aligned_cols=19  Identities=32%  Similarity=0.504  Sum_probs=8.1

Q ss_pred             cccccCChhHHHHhHhhhc
Q psy6525         272 CAKLFACKRSLQDHMQRHE  290 (360)
Q Consensus       272 C~~~f~~~~~l~~H~~~h~  290 (360)
                      |.+.|.+...|.+|..+|+
T Consensus        10 c~kgf~tlhhltrhs~tht   28 (30)
T d1tf3a2          10 CEKGFTSLHHLTRHSLTHT   28 (30)
T ss_dssp             CCCEESSTTHHHHHHHHHH
T ss_pred             ccccchhhhhhhhhhcccc
Confidence            4444444444444444443

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.50  E-value=0.00038  Score=34.88  Aligned_cols=21  Identities=24%  Similarity=0.452  Sum_probs=9.5

Q ss_pred             cccccc--cccccCChhHHHHhH
Q psy6525         266 VHECNL--CAKLFACKRSLQDHM  286 (360)
Q Consensus       266 ~~~C~~--C~~~f~~~~~l~~H~  286 (360)
                      ||.|.+  |.+.|++.+...+|+
T Consensus         2 PY~C~~~gC~KafsNsSDraKHq   24 (31)
T d2glia4           2 PYMCEHEGCSKAFSNASDRAKHQ   24 (31)
T ss_dssp             CEECCSTTCCCEESSSSTTHHHH
T ss_pred             CccccCCChhhhhcchhhhhhhc
Confidence            444443  444444444444443

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.42  E-value=0.00073  Score=32.50  Aligned_cols=23  Identities=35%  Similarity=0.550  Sum_probs=13.0

Q ss_pred             cccccchhhhcCHHHHHHHHhhh
Q psy6525         295 YQCAMCKKQYASKKMLEKHIRRH  317 (360)
Q Consensus       295 ~~C~~C~~~f~~~~~L~~H~~~h  317 (360)
                      -+|+.|.++.+++.+|+.|.|+|
T Consensus         3 ekc~ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           3 EKCSECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHGGG
T ss_pred             ccCcccccccCcHHHHHHhhccc
Confidence            35555555555555555555555

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.40  E-value=0.00047  Score=34.52  Aligned_cols=25  Identities=32%  Similarity=0.683  Sum_probs=13.6

Q ss_pred             Ccccccc--chhhhcCHHHHHHHH-hhh
Q psy6525         293 NKYQCAM--CKKQYASKKMLEKHI-RRH  317 (360)
Q Consensus       293 ~~~~C~~--C~~~f~~~~~L~~H~-~~h  317 (360)
                      +||.|.+  |.|+|++.+.-..|+ |+|
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTH   28 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTH   28 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTT
T ss_pred             CCccccCCChhhhhcchhhhhhhccccc
Confidence            3555555  555555555555554 444

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.37  E-value=0.00097  Score=32.07  Aligned_cols=25  Identities=28%  Similarity=0.456  Sum_probs=23.2

Q ss_pred             cccccccccccCChHHHHHHHHHhC
Q psy6525         321 DYKCYICGNRYATQKYLEEHIRLHQ  345 (360)
Q Consensus       321 ~~~C~~C~~~f~~~~~l~~H~~~h~  345 (360)
                      |-+|+.|.++..++..|+.|.|+|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            5689999999999999999999984

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.16  E-value=0.0018  Score=30.16  Aligned_cols=22  Identities=18%  Similarity=0.720  Sum_probs=16.2

Q ss_pred             ccccccccccCChHHHHHHHHH
Q psy6525         322 YKCYICGNRYATQKYLEEHIRL  343 (360)
Q Consensus       322 ~~C~~C~~~f~~~~~l~~H~~~  343 (360)
                      |.|+.|-+.|+++.++..|+++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            5677777777777777777765

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.84  E-value=0.0025  Score=35.56  Aligned_cols=26  Identities=23%  Similarity=0.494  Sum_probs=22.4

Q ss_pred             CcccccccccccCChHHHHHHHHHhC
Q psy6525         320 QDYKCYICGNRYATQKYLEEHIRLHQ  345 (360)
Q Consensus       320 ~~~~C~~C~~~f~~~~~l~~H~~~h~  345 (360)
                      ..|.|..|+|.|+....|+.|.+.|-
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcC
Confidence            35789999999999999999988874

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.72  E-value=0.0034  Score=29.11  Aligned_cols=22  Identities=36%  Similarity=0.943  Sum_probs=15.7

Q ss_pred             eeecccccccccChhHHHHHHH
Q psy6525         184 KYKCKECGKCYTQNTNLKQHML  205 (360)
Q Consensus       184 ~~~C~~C~~~f~~~~~l~~H~~  205 (360)
                      ||+|..|...|..+..|..|+.
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            5777777777777777777754

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.69  E-value=0.003  Score=30.08  Aligned_cols=22  Identities=32%  Similarity=0.613  Sum_probs=15.9

Q ss_pred             ccccccchhhhcCHHHHHHHHh
Q psy6525         294 KYQCAMCKKQYASKKMLEKHIR  315 (360)
Q Consensus       294 ~~~C~~C~~~f~~~~~L~~H~~  315 (360)
                      ||+|..||+.|-++.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            5777777777777777777754

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.52  E-value=0.0042  Score=31.72  Aligned_cols=26  Identities=19%  Similarity=0.583  Sum_probs=18.2

Q ss_pred             cccccccccccCChHHHHHHHHHhCC
Q psy6525         321 DYKCYICGNRYATQKYLEEHIRLHQG  346 (360)
Q Consensus       321 ~~~C~~C~~~f~~~~~l~~H~~~h~g  346 (360)
                      .|.|..||+.|++...+.+|--.-+|
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            36777777777777777777665554

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.35  E-value=0.0045  Score=32.84  Aligned_cols=28  Identities=25%  Similarity=0.425  Sum_probs=23.5

Q ss_pred             CCCcccc--cccccccCChhHHHHhHhhhc
Q psy6525         263 GLEVHEC--NLCAKLFACKRSLQDHMQRHE  290 (360)
Q Consensus       263 ~~~~~~C--~~C~~~f~~~~~l~~H~~~h~  290 (360)
                      .++||.|  +-|+.+|.+...|..|...|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            4789999  459999999999999988875

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.16  E-value=0.0081  Score=28.66  Aligned_cols=23  Identities=26%  Similarity=0.570  Sum_probs=12.1

Q ss_pred             cccccccccccCHHHHHHHHHHc
Q psy6525         157 FKCDLCSRTFNSQSYLQQHKKHD  179 (360)
Q Consensus       157 ~~C~~C~~~f~~~~~l~~H~~~~  179 (360)
                      |+|+.|+.....++.|..|++.-
T Consensus         3 ~qcphc~tiiarksdlrvhlrnl   25 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRKQ   25 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHT
T ss_pred             ccCCcchhheeehhhhhHHhhhc
Confidence            45555555555555555555543

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.70  E-value=0.0075  Score=30.77  Aligned_cols=26  Identities=19%  Similarity=0.672  Sum_probs=19.6

Q ss_pred             ccccccchhhhcCHHHHHHHHhhhcC
Q psy6525         294 KYQCAMCKKQYASKKMLEKHIRRHEG  319 (360)
Q Consensus       294 ~~~C~~C~~~f~~~~~L~~H~~~h~~  319 (360)
                      .|.|..|++.|.+...+.+|.....|
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            47788888888888888888766554

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=94.66  E-value=0.0088  Score=27.80  Aligned_cols=22  Identities=27%  Similarity=0.800  Sum_probs=14.7

Q ss_pred             cccccchhhhcCHHHHHHHHhh
Q psy6525         295 YQCAMCKKQYASKKMLEKHIRR  316 (360)
Q Consensus       295 ~~C~~C~~~f~~~~~L~~H~~~  316 (360)
                      |.|+.|-+.|.++.++..|.++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            5666676677776666666654

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.64  E-value=0.0076  Score=33.58  Aligned_cols=26  Identities=23%  Similarity=0.580  Sum_probs=21.6

Q ss_pred             CccccccchhhhcCHHHHHHHHhhhc
Q psy6525         293 NKYQCAMCKKQYASKKMLEKHIRRHE  318 (360)
Q Consensus       293 ~~~~C~~C~~~f~~~~~L~~H~~~h~  318 (360)
                      ..|.|..|+|.|+....|+.|...|.
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcC
Confidence            35789999999999999999988774

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.33  E-value=0.014  Score=28.80  Aligned_cols=27  Identities=33%  Similarity=0.695  Sum_probs=19.9

Q ss_pred             ccccc--ccccccCChHHHHHHHHHhCCC
Q psy6525         321 DYKCY--ICGNRYATQKYLEEHIRLHQGH  347 (360)
Q Consensus       321 ~~~C~--~C~~~f~~~~~l~~H~~~h~g~  347 (360)
                      .|.|+  .|+..|.....|..|+-.|+|+
T Consensus         3 ~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           3 RYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             ceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            35564  4888888888888888888875

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.94  E-value=0.014  Score=30.21  Aligned_cols=19  Identities=32%  Similarity=0.515  Sum_probs=10.5

Q ss_pred             cccCChHHHHHHHHHhCCC
Q psy6525         329 NRYATQKYLEEHIRLHQGH  347 (360)
Q Consensus       329 ~~f~~~~~l~~H~~~h~g~  347 (360)
                      +.|.....|..|||+|||+
T Consensus        15 ~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          15 RPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CCCSSHHHHHHHTHHHHCC
T ss_pred             CcchhHHHHHHHHhhcCCC
Confidence            3455555555566555553

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.72  E-value=0.026  Score=26.85  Aligned_cols=21  Identities=29%  Similarity=0.589  Sum_probs=10.8

Q ss_pred             ccccccccccCChHHHHHHHH
Q psy6525         322 YKCYICGNRYATQKYLEEHIR  342 (360)
Q Consensus       322 ~~C~~C~~~f~~~~~l~~H~~  342 (360)
                      |+|+.|+-...+++.|..|++
T Consensus         3 ~qcphc~tiiarksdlrvhlr   23 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLR   23 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHH
T ss_pred             ccCCcchhheeehhhhhHHhh
Confidence            445555555555555555544

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.86  E-value=0.037  Score=28.56  Aligned_cols=20  Identities=25%  Similarity=0.152  Sum_probs=12.5

Q ss_pred             CCccCCHHHHHHHHHHhcCC
Q psy6525         245 GKVTPYYQHYLRHMRIHQGL  264 (360)
Q Consensus       245 ~~~f~~~~~l~~H~~~h~~~  264 (360)
                      ++.|.....|..|+++|+|+
T Consensus        14 ~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          14 LRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TCCCSSHHHHHHHTHHHHCC
T ss_pred             CCcchhHHHHHHHHhhcCCC
Confidence            34566666666666666654

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.76  E-value=0.054  Score=26.16  Aligned_cols=22  Identities=23%  Similarity=0.552  Sum_probs=10.1

Q ss_pred             cccccccccccCHHHHHHHHHH
Q psy6525         157 FKCDLCSRTFNSQSYLQQHKKH  178 (360)
Q Consensus       157 ~~C~~C~~~f~~~~~l~~H~~~  178 (360)
                      |.|..|++...+...++.|...
T Consensus         3 ftc~hcgkqlks~~gmkyhvma   24 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVMA   24 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHH
T ss_pred             eechhHHHHHhhccCceEEEee
Confidence            3444444444444444444443

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=92.06  E-value=0.048  Score=26.84  Aligned_cols=19  Identities=26%  Similarity=0.627  Sum_probs=7.8

Q ss_pred             cccccCChhHHHHhHhhhc
Q psy6525         272 CAKLFACKRSLQDHMQRHE  290 (360)
Q Consensus       272 C~~~f~~~~~l~~H~~~h~  290 (360)
                      |+..|.....|..|+-.|+
T Consensus        11 C~A~ynk~wkL~AHLckHT   29 (31)
T d1tf3a1          11 CGAAYNKNWKLQAHLSKHT   29 (31)
T ss_dssp             GCCEESSHHHHHHHHHHHH
T ss_pred             cchhhccchhhhHHhhhhc
Confidence            4444444444444444433

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=91.54  E-value=0.059  Score=27.05  Aligned_cols=20  Identities=25%  Similarity=0.536  Sum_probs=10.4

Q ss_pred             ccccccccccCChhHHHHhH
Q psy6525         267 HECNLCAKLFACKRSLQDHM  286 (360)
Q Consensus       267 ~~C~~C~~~f~~~~~l~~H~  286 (360)
                      |.|+-||-.|++.+.|..|+
T Consensus         9 f~c~pcgirfss~stleahq   28 (36)
T d1y0jb1           9 FMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CBCTTTCCBCSCHHHHHHHT
T ss_pred             eeccccceeecChhHHHhhh
Confidence            45555555555555555543

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=90.91  E-value=0.08  Score=26.57  Aligned_cols=21  Identities=29%  Similarity=0.418  Sum_probs=16.5

Q ss_pred             CcccCCCCCccCCHHHHHHHH
Q psy6525         238 RFKCDLCGKVTPYYQHYLRHM  258 (360)
Q Consensus       238 ~~~C~~C~~~f~~~~~l~~H~  258 (360)
                      +|.|.-||..|++.+.|..|+
T Consensus         8 rf~c~pcgirfss~stleahq   28 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHT
T ss_pred             ceeccccceeecChhHHHhhh
Confidence            577888888888888887774

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.80  E-value=0.066  Score=25.61  Aligned_cols=19  Identities=32%  Similarity=0.520  Sum_probs=11.2

Q ss_pred             ccccccChHHHHHHHHHcC
Q psy6525         135 CFLMLNNRCYTRFHLLKHN  153 (360)
Q Consensus       135 C~~~f~~~~~l~~H~~~h~  153 (360)
                      |++.|.+.+.++.|+.+|+
T Consensus         9 C~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           9 CTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             CCCEESSHHHHHHHHGGGS
T ss_pred             HHHHhhchHHHHHHhhccC
Confidence            5566666666666665553

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.72  E-value=0.066  Score=25.60  Aligned_cols=18  Identities=17%  Similarity=0.577  Sum_probs=12.3

Q ss_pred             cccccCChHHHHHHHHHh
Q psy6525         327 CGNRYATQKYLEEHIRLH  344 (360)
Q Consensus       327 C~~~f~~~~~l~~H~~~h  344 (360)
                      |++.|.+.+.++.|+-+|
T Consensus         9 C~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           9 CTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             CCCEESSHHHHHHHHGGG
T ss_pred             HHHHhhchHHHHHHhhcc
Confidence            667777777777776555

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.00  E-value=0.04  Score=34.04  Aligned_cols=23  Identities=30%  Similarity=0.729  Sum_probs=15.6

Q ss_pred             cccccccccccCChhHHHHhHhh
Q psy6525         266 VHECNLCAKLFACKRSLQDHMQR  288 (360)
Q Consensus       266 ~~~C~~C~~~f~~~~~l~~H~~~  288 (360)
                      .|.|..|++.|.+...|..|+++
T Consensus        15 qfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          15 LHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             CSEETTTTEECSSHHHHHHHTTC
T ss_pred             EEecccccCccCCHHHHHHHHcc
Confidence            46677777777777777777653

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.89  E-value=0.2  Score=24.11  Aligned_cols=21  Identities=19%  Similarity=0.577  Sum_probs=13.6

Q ss_pred             ccccccccccCChHHHHHHHH
Q psy6525         322 YKCYICGNRYATQKYLEEHIR  342 (360)
Q Consensus       322 ~~C~~C~~~f~~~~~l~~H~~  342 (360)
                      |.|..||+..++...++.|+-
T Consensus         3 ftc~hcgkqlks~~gmkyhvm   23 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVM   23 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHH
T ss_pred             eechhHHHHHhhccCceEEEe
Confidence            566666666666666666644

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.18  E-value=0.044  Score=33.20  Aligned_cols=35  Identities=11%  Similarity=0.506  Sum_probs=17.7

Q ss_pred             CccccccchhhhcCHHHHHHHHhhhcCCccccccccc
Q psy6525         293 NKYQCAMCKKQYASKKMLEKHIRRHEGQDYKCYICGN  329 (360)
Q Consensus       293 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~C~~C~~  329 (360)
                      ..|.|+.|+++|+...++.-  -......|.|.+|+-
T Consensus        13 ~~y~Cp~C~~~ys~Lda~~L--~d~~~~~F~C~~C~~   47 (62)
T d1vd4a_          13 ASFKCPVCSSTFTDLEANQL--FDPMTGTFRCTFCHT   47 (62)
T ss_dssp             SEEECSSSCCEEEHHHHHHH--EETTTTEEBCSSSCC
T ss_pred             CceECCCCCCCcchhhHHHh--cCcCCCeEEecCCCC
Confidence            34666666666665554432  112223466666654

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=88.64  E-value=0.29  Score=26.91  Aligned_cols=22  Identities=23%  Similarity=0.460  Sum_probs=10.9

Q ss_pred             CcccCCCCCccCCHHHHHHHHH
Q psy6525         238 RFKCDLCGKVTPYYQHYLRHMR  259 (360)
Q Consensus       238 ~~~C~~C~~~f~~~~~l~~H~~  259 (360)
                      |..|++|+....+..+|++|+.
T Consensus        24 patcpic~avirqsrnlrrhle   45 (54)
T d1yuja_          24 PATCPICYAVIRQSRNLRRHLE   45 (54)
T ss_dssp             CEECTTTCCEESSHHHHHHHHH
T ss_pred             CCCCchHHHHHHHHHHHHHHHH
Confidence            4445555555555555555544

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=87.94  E-value=0.12  Score=24.30  Aligned_cols=16  Identities=25%  Similarity=0.480  Sum_probs=6.4

Q ss_pred             chhhhcCHHHHHHHHh
Q psy6525         300 CKKQYASKKMLEKHIR  315 (360)
Q Consensus       300 C~~~f~~~~~L~~H~~  315 (360)
                      |++.|.....|+.|+-
T Consensus         9 c~kafkkhnqlkvhqf   24 (28)
T d2j7ja1           9 CGKAFKKHNQLKVHQF   24 (28)
T ss_dssp             CCCEESSHHHHHHHHH
T ss_pred             chHHHhhccceEEEee
Confidence            3444444444444333

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=87.87  E-value=0.19  Score=27.71  Aligned_cols=24  Identities=29%  Similarity=0.497  Sum_probs=14.8

Q ss_pred             CcccccccccccCChHHHHHHHHH
Q psy6525         320 QDYKCYICGNRYATQKYLEEHIRL  343 (360)
Q Consensus       320 ~~~~C~~C~~~f~~~~~l~~H~~~  343 (360)
                      .|-.|++|+....+..+|++|+..
T Consensus        23 qpatcpic~avirqsrnlrrhlel   46 (54)
T d1yuja_          23 QPATCPICYAVIRQSRNLRRHLEL   46 (54)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHHH
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHH
Confidence            355666666666666666666543

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.20  E-value=0.14  Score=30.91  Aligned_cols=37  Identities=16%  Similarity=0.546  Sum_probs=23.1

Q ss_pred             CCceecccchhccCChHHHHHHHhhccCCCCCcccccccccc
Q psy6525          97 TKNVLCYICDEILKDIDDLRYHGLLHATPLGTQFQCNVCFLM  138 (360)
Q Consensus        97 ~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~C~~C~~~  138 (360)
                      ...|.|+.|++.|.....++.   .-..  ...|.|..|+-.
T Consensus        12 ~~~y~Cp~C~~~ys~Lda~~L---~d~~--~~~F~C~~C~~e   48 (62)
T d1vd4a_          12 RASFKCPVCSSTFTDLEANQL---FDPM--TGTFRCTFCHTE   48 (62)
T ss_dssp             SSEEECSSSCCEEEHHHHHHH---EETT--TTEEBCSSSCCB
T ss_pred             CCceECCCCCCCcchhhHHHh---cCcC--CCeEEecCCCCE
Confidence            346888888888876665543   2111  346778877654

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.16  E-value=0.16  Score=31.22  Aligned_cols=25  Identities=20%  Similarity=0.277  Sum_probs=20.9

Q ss_pred             CCCceecccchhccCChHHHHHHHh
Q psy6525          96 DTKNVLCYICDEILKDIDDLRYHGL  120 (360)
Q Consensus        96 ~~~~~~C~~C~~~f~~~~~l~~H~~  120 (360)
                      +...|.|..|++.|.+...|..|.+
T Consensus        12 G~gqfYCv~C~K~F~se~~l~~H~k   36 (67)
T d1zr9a1          12 GGGLHRCLACARYFIDSTNLKTHFR   36 (67)
T ss_dssp             GGGCSEETTTTEECSSHHHHHHHTT
T ss_pred             CCCEEecccccCccCCHHHHHHHHc
Confidence            3456889999999999999999965

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=86.48  E-value=0.22  Score=25.29  Aligned_cols=20  Identities=15%  Similarity=0.625  Sum_probs=8.8

Q ss_pred             ccccccccccCChhHHHHhH
Q psy6525         267 HECNLCAKLFACKRSLQDHM  286 (360)
Q Consensus       267 ~~C~~C~~~f~~~~~l~~H~  286 (360)
                      |.|.+|.+.+..-+++-+|.
T Consensus         9 yRC~~C~r~YTHISNFCRHy   28 (37)
T d2drpa1           9 YRCKVCSRVYTHISNFCRHY   28 (37)
T ss_dssp             EECTTTCCEESSHHHHHHHH
T ss_pred             EEeehhhHHHHHHHHHHHHH
Confidence            44444444444444444443

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=86.19  E-value=0.27  Score=24.93  Aligned_cols=26  Identities=27%  Similarity=0.703  Sum_probs=18.3

Q ss_pred             ccccccccccccCHHHHHHHHHHcCC
Q psy6525         156 RFKCDLCSRTFNSQSYLQQHKKHDHE  181 (360)
Q Consensus       156 ~~~C~~C~~~f~~~~~l~~H~~~~h~  181 (360)
                      .|.|.+|.+++...+.+-+|....|.
T Consensus         8 ~yRC~~C~r~YTHISNFCRHyvtSHk   33 (37)
T d2drpa1           8 TYRCKVCSRVYTHISNFCRHYVTSHK   33 (37)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHSS
T ss_pred             EEEeehhhHHHHHHHHHHHHHHhhcc
Confidence            56777777777777777777766553

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=83.19  E-value=0.23  Score=26.41  Aligned_cols=11  Identities=18%  Similarity=0.534  Sum_probs=5.5

Q ss_pred             CCCcccccccc
Q psy6525         263 GLEVHECNLCA  273 (360)
Q Consensus       263 ~~~~~~C~~C~  273 (360)
                      |+.|-.|++|+
T Consensus        17 g~~P~~CPvCg   27 (37)
T d1nnqa2          17 DEAPEYCPVCG   27 (37)
T ss_dssp             SCCCSBCTTTC
T ss_pred             CCCCCcCCCCC
Confidence            34445555554

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.84  E-value=0.33  Score=28.86  Aligned_cols=27  Identities=22%  Similarity=0.642  Sum_probs=20.1

Q ss_pred             CcccccccccccCChHHHHHHHHHhCC
Q psy6525         320 QDYKCYICGNRYATQKYLEEHIRLHQG  346 (360)
Q Consensus       320 ~~~~C~~C~~~f~~~~~l~~H~~~h~g  346 (360)
                      ..|+|..|...|.....|..|+..|..
T Consensus        17 ~~yQC~HCd~K~~s~~el~~hl~~hne   43 (75)
T d1x6fa1          17 STYQCKHCDSKLQSTAELTSHLNIHNE   43 (75)
T ss_dssp             SCEECSSSCCEESSHHHHHHHHHHHHH
T ss_pred             ceeeechhHHHHhhHHHHHHHHHhccH
Confidence            357788888888888888888777654

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.32  E-value=0.44  Score=22.79  Aligned_cols=18  Identities=44%  Similarity=0.949  Sum_probs=11.2

Q ss_pred             ccccccCHHHHHHHHHHc
Q psy6525         162 CSRTFNSQSYLQQHKKHD  179 (360)
Q Consensus       162 C~~~f~~~~~l~~H~~~~  179 (360)
                      |++.|+++..|..|.+..
T Consensus         8 c~kifsnrqylnhh~kyq   25 (30)
T d2dlka1           8 CGRIFSNRQYLNHHKKYQ   25 (30)
T ss_dssp             TCCEESSHHHHHHHHHHG
T ss_pred             chhhhccHHHHHhHHHHH
Confidence            666666666666665543

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=80.47  E-value=0.34  Score=25.57  Aligned_cols=11  Identities=27%  Similarity=0.933  Sum_probs=5.4

Q ss_pred             CCCcccccccc
Q psy6525         263 GLEVHECNLCA  273 (360)
Q Consensus       263 ~~~~~~C~~C~  273 (360)
                      |+.|-.|++|+
T Consensus        17 g~~Pe~CPvCg   27 (36)
T d1yuza2          17 GEDFEKCPICF   27 (36)
T ss_dssp             SSCCSBCTTTC
T ss_pred             CCCCCcCCCCC
Confidence            34444555554