Psyllid ID: psy6676

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140----
Protein Sequence
MARAQHRDDMALETINLAQGYIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTHNLGSATSTSSGSTTATLLSVSPTSFIVESMVNMEKAS
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccHHccccEccccHHHHHHHHHHccccEEccccccEEccHHHHHHHcHHHHccccEEccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHHcccccccccHccccEccccHHHHHHHHcccccccccc
Coil and Loop (DISEMBL)
maraqhrdDMALETINLAQgyihskekpfkctecgkgfcqsRTLAVHKILHleesphkcpvcsrsfnqrsnlkthllthtdikpyncaacgkvfrrncdlrrhslthnlgsatstssgsttatllsvsptSFIVESMVNMEKAS
Flexible Loop (DISEMBL)
maraqhrddmaLETINLAQGYIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKThllthtdikpynCAACGKVFRRNCDLRRHSLthnlgsatstssgsttatllsvsptsfiveSMVNMEKAS
Low Complexity Region (SEG)
MARAQHRDDMALETINLAQGYIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTHNlgsatstssgsttatllsVSPTSFIVESMVNMEKAS
Disordered region (IsUnstruct)
***********LETINLAQGYIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCDLRRHSL***************************************
Disordered Region (DISOPRED)
**RAQHRDDMALETINLAQGYIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTHNLGSATSTSSGSTTATLLSVSPTSFIVESMVNMEK**
Disordered Region (DISEMBL)
********DMALETINLAQGYIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTHNL************ATLLSVSPTSFIVESMVNMEKAS
Disordered Region (DISPRO)
MARAQHRDDMALETINLAQGYIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTHNLGSATSTSSGSTTATLLSVSPTSFIVESMVNM**A*
Transmembrane Helix (TMHMM)
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Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MARAQHRDDMALETINLAQGYIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTHNLGSATSTSSGSTTATLLSVSPTSFIVESMVNMEKAS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	144	2.2.26 [Sep-21-2011]
Q9VQS7	578	Protein sister of odd and	yes	N/A	0.631	0.157	0.934	7e-49
Q9VQU9	744	Protein bowel OS=Drosophi	no	N/A	0.854	0.165	0.666	2e-47
Q8N2R0	312	Protein odd-skipped-relat	yes	N/A	0.597	0.275	0.885	3e-43
Q91ZD1	312	Protein odd-skipped-relat	yes	N/A	0.597	0.275	0.885	3e-43
P23803	392	Protein odd-skipped OS=Dr	no	N/A	0.423	0.155	0.770	9e-26
A6NK75	572	Zinc finger protein 98 OS	no	N/A	0.534	0.134	0.523	3e-21
Q9NYT6	803	Zinc finger protein 226 O	no	N/A	0.583	0.104	0.517	5e-21
A6NK21	547	Putative zinc finger prot	no	N/A	0.583	0.153	0.523	5e-21
A6NNF4	738	Zinc finger protein 726 O	no	N/A	0.562	0.109	0.511	8e-21
A1YG88	673	Zinc finger protein 16 OS	N/A	N/A	0.465	0.099	0.511	1e-20

>sp|Q9VQS7|SOB_DROME Protein sister of odd and bowel OS=Drosophila melanogaster GN=sob PE=2 SV=1

 Score =  192 bits (487), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 85/91 (93%), Positives = 89/91 (97%)

Query: 21  YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHT 80
           YIHSKEKPFKC ECGKGFCQSRTLAVHKILH+EESPHKCPVC+RSFNQRSNLKTHLLTHT
Sbjct: 443 YIHSKEKPFKCAECGKGFCQSRTLAVHKILHMEESPHKCPVCNRSFNQRSNLKTHLLTHT 502

Query: 81  DIKPYNCAACGKVFRRNCDLRRHSLTHNLGS 111
           DIKPYNCA+CGKVFRRNCDLRRHSLTHNL +
Sbjct: 503 DIKPYNCASCGKVFRRNCDLRRHSLTHNLSA 533

Pair-rule protein that determines both the size and polarity of even-numbered as well as odd-numbered parasegments during embryogenesis. DNA-binding transcription factor that acts primarily as a transcriptional repressor but can also function as a transcriptional activator, depending on the stage of development and spatial restrictions (By similarity). May function redundantly with odd and drm in leg joint formation during the larval stages, acting downstream of Notch activation.
Drosophila melanogaster (taxid: 7227)

>sp|Q9VQU9|BOWEL_DROME Protein bowel OS=Drosophila melanogaster GN=bowl PE=1 SV=1

 Score =  187 bits (474), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 94/141 (66%), Positives = 103/141 (73%), Gaps = 18/141 (12%)

Query: 21  YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHT 80
           YIHSKEKPFKCTECGKGFCQSRTLAVHKILH+EESPHKCPVCSRSFNQRSNLKTHLLTHT
Sbjct: 286 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHMEESPHKCPVCSRSFNQRSNLKTHLLTHT 345

Query: 81  DIKPYNCAACGKVFRRNCDLRRHSLTHNLGSATSTS-------------SGSTTATLLSV 127
           D KPY C++CGKVFRRNCDLRRH+LTH +G   S               SG    +LL V
Sbjct: 346 DHKPYECSSCGKVFRRNCDLRRHALTHAVGEVNSGDYVDVGEEDEARNLSGDEEDSLLEV 405

Query: 128 -----SPTSFIVESMVNMEKA 143
                SP   + ES  + EK+
Sbjct: 406 DSPRQSPVHNLGESGGSGEKS 426

Putative transcription factor. Required for leg joint formation, acting downstream of Notch to pattern the leg tarsal segments. Functions in the terminal pathway during embryogenesis, acting downstream of tll in the posterior of the embryo. Acts in a hierarchy downstream of drm and lin during foregut and hindgut patterning and morphogenesis. Involved in cell rearrangement during elongation of the embryonic hindgut. Regulates expression of hindgut patterning genes to establish the small intestine region of the embryonic hindgut. Required in the foregut for spatially localized gene expression and morphogenesis of the proventriculus.

Drosophila melanogaster (taxid: 7227)

>sp|Q8N2R0|OSR2_HUMAN Protein odd-skipped-related 2 OS=Homo sapiens GN=OSR2 PE=2 SV=2

 Score =  173 bits (439), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 77/87 (88%), Positives = 81/87 (93%)

Query: 21  YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHT 80
           YIHSKEKPFKC ECGKGFCQSRTLAVHK LH++ESPHKCP C R+FNQRSNLKTHLLTHT
Sbjct: 220 YIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQESPHKCPTCGRTFNQRSNLKTHLLTHT 279

Query: 81  DIKPYNCAACGKVFRRNCDLRRHSLTH 107
           DIKPY+C  CGKVFRRNCDLRRHSLTH
Sbjct: 280 DIKPYSCEQCGKVFRRNCDLRRHSLTH 306

Homo sapiens (taxid: 9606)

>sp|Q91ZD1|OSR2_MOUSE Protein odd-skipped-related 2 OS=Mus musculus GN=Osr2 PE=1 SV=1

 Score =  173 bits (439), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 77/87 (88%), Positives = 81/87 (93%)

Query: 21  YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHT 80
           YIHSKEKPFKC ECGKGFCQSRTLAVHK LH++ESPHKCP C R+FNQRSNLKTHLLTHT
Sbjct: 220 YIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQESPHKCPTCGRTFNQRSNLKTHLLTHT 279

Query: 81  DIKPYNCAACGKVFRRNCDLRRHSLTH 107
           DIKPY+C  CGKVFRRNCDLRRHSLTH
Sbjct: 280 DIKPYSCEQCGKVFRRNCDLRRHSLTH 306

Mus musculus (taxid: 10090)

>sp|P23803|ODD_DROME Protein odd-skipped OS=Drosophila melanogaster GN=odd PE=2 SV=3

 Score =  115 bits (288), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 47/61 (77%), Positives = 57/61 (93%)

Query: 21  YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHT 80
           YIHSK+KPFKC++CGKGFCQSRTLAVHK+ HLEE PHKCP+C RSFNQR+NLK+HL +H+
Sbjct: 268 YIHSKDKPFKCSDCGKGFCQSRTLAVHKVTHLEEGPHKCPICQRSFNQRANLKSHLQSHS 327

Query: 81  D 81
           +
Sbjct: 328 E 328

Pair-rule protein that determines both the size and polarity of even-numbered as well as odd-numbered parasegments during embryogenesis. DNA-binding transcription factor that acts primarily as a transcriptional repressor but can also function as a transcriptional activator, depending on the stage of development and spatial restrictions. May function redundantly with odd and drm in leg joint formation during the larval stages, acting downstream of Notch activation.

Drosophila melanogaster (taxid: 7227)

>sp|A6NK75|ZNF98_HUMAN Zinc finger protein 98 OS=Homo sapiens GN=ZNF98 PE=2 SV=4

 Score =  100 bits (249), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 45/86 (52%), Positives = 57/86 (66%)

Query: 22  IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTD 81
           IH+ EKP+KC ECGK F QS TL+ HK++H  E P+KC  C ++FNQ S+L TH + HT 
Sbjct: 455 IHTGEKPYKCEECGKAFNQSSTLSKHKVIHTGEKPYKCEECGKAFNQSSHLTTHKMIHTG 514

Query: 82  IKPYNCAACGKVFRRNCDLRRHSLTH 107
            KPY C  CGK F  +  L RH + H
Sbjct: 515 EKPYKCEECGKAFNNSSILNRHKMIH 540

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q9NYT6|ZN226_HUMAN Zinc finger protein 226 OS=Homo sapiens GN=ZNF226 PE=1 SV=2

 Score = 99.8 bits (247), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 44/85 (51%), Positives = 57/85 (67%)

Query: 23  HSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDI 82
           HS EKPFKC ECG+GF QS  L +H+++H  E P+KC  C + F++R++LK H   HT  
Sbjct: 553 HSIEKPFKCEECGQGFNQSSRLQIHQLIHTGEKPYKCEECGKGFSRRADLKIHCRIHTGE 612

Query: 83  KPYNCAACGKVFRRNCDLRRHSLTH 107
           KPYNC  CGKVFR+  +L  H   H
Sbjct: 613 KPYNCEECGKVFRQASNLLAHQRVH 637

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|A6NK21|YI017_HUMAN Putative zinc finger protein LOC730110 OS=Homo sapiens PE=5 SV=3

 Score = 99.8 bits (247), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 45/86 (52%), Positives = 57/86 (66%)

Query: 22  IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTD 81
           IH+ EKP+KC ECGK F QS TL+ HK++H  E P+KC  C ++FNQ S+L TH + HT 
Sbjct: 420 IHTGEKPYKCEECGKAFNQSSTLSKHKVIHTGEKPYKCGECGKAFNQSSHLTTHKIIHTG 479

Query: 82  IKPYNCAACGKVFRRNCDLRRHSLTH 107
            KPY C  CGK F  +  L RH + H
Sbjct: 480 EKPYKCEECGKAFNNSSILNRHKMIH 505

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|A6NNF4|ZN726_HUMAN Zinc finger protein 726 OS=Homo sapiens GN=ZNF726 PE=2 SV=3

 Score = 99.0 bits (245), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 46/90 (51%), Positives = 57/90 (63%)

Query: 18  AQGYIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLL 77
           A   IH+ EKP+KC ECGK F  S TL+ HK +H  E P+KC  C ++FNQ SNL TH +
Sbjct: 498 AHKIIHTGEKPYKCEECGKAFILSSTLSKHKRIHTGEKPYKCEECGKTFNQSSNLSTHKI 557

Query: 78  THTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
            HT  KPY C  CGK F R+ +L  H + H
Sbjct: 558 IHTGEKPYKCEECGKAFNRSSNLSTHKIIH 587

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|A1YG88|ZNF16_PANPA Zinc finger protein 16 OS=Pan paniscus GN=ZNF16 PE=3 SV=1

 Score = 98.6 bits (244), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 44/86 (51%), Positives = 57/86 (66%)

Query: 22  IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTD 81
           +H+ EKP+ C ECGKGF QS  L  H+I+H  E P+KC  C ++F+QRS L  H   HT 
Sbjct: 585 VHTGEKPYTCVECGKGFSQSSHLIQHQIIHTGERPYKCSECGKAFSQRSVLIQHQRIHTG 644

Query: 82  IKPYNCAACGKVFRRNCDLRRHSLTH 107
           +KPY+CAACGK F +   L +H L H
Sbjct: 645 VKPYDCAACGKAFSQRSKLIKHQLIH 670

May be involved in transcriptional regulation.

Pan paniscus (taxid: 9597)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	144
270012746	334	sister of odd and bowl [Tribolium castan	0.791	0.341	0.770	1e-50
91088523	448	PREDICTED: similar to sister of odd and	0.791	0.254	0.770	1e-50
170049194	420	conserved hypothetical protein [Culex qu	0.645	0.221	0.935	9e-49
380021242	425	PREDICTED: uncharacterized protein LOC10	0.652	0.221	0.925	3e-48
383857547	413	PREDICTED: zinc finger and SCAN domain-c	0.652	0.227	0.925	3e-48
195117268	648	GI17769 [Drosophila mojavensis] gi|19391	0.680	0.151	0.887	3e-48
156545195	381	PREDICTED: hypothetical protein LOC10012	0.729	0.275	0.857	4e-48
195387704	654	GJ17594 [Drosophila virilis] gi|19414899	0.631	0.139	0.934	5e-48
157116118	451	hypothetical protein AaeL_AAEL007453 [Ae	0.631	0.201	0.956	5e-48
110762341	385	PREDICTED: zinc finger and SCAN domain-c	0.652	0.244	0.925	7e-48

>gi|270012746|gb|EFA09194.1| sister of odd and bowl [Tribolium castaneum]

 Score =  204 bits (519), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 94/122 (77%), Positives = 108/122 (88%), Gaps = 8/122 (6%)

Query: 21  YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHT 80
           YIHSKEKPFKCTECGKGFCQSRTLAVHKILH+EESPHKCPVCSRSFNQRSNLKTHLLTHT
Sbjct: 220 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHMEESPHKCPVCSRSFNQRSNLKTHLLTHT 279

Query: 81  DIKPYNCAACGKVFRRNCDLRRHSLTHNLGSATSTSSGSTTATLLSVSPTSFIVESMVNM 140
           DIKPYNC+ACGKVFRRNCDLRRHSLTHNLG++TST++        +    +F ++S+++ 
Sbjct: 280 DIKPYNCSACGKVFRRNCDLRRHSLTHNLGTSTSTAA--------TAGAQNFTIDSIMSK 331

Query: 141 EK 142
           +K
Sbjct: 332 DK 333

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91088523|ref|XP_972035.1| PREDICTED: similar to sister of odd and bowl CG3242-PA [Tribolium castaneum]

 Score =  204 bits (518), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 94/122 (77%), Positives = 108/122 (88%), Gaps = 8/122 (6%)

Query: 21  YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHT 80
           YIHSKEKPFKCTECGKGFCQSRTLAVHKILH+EESPHKCPVCSRSFNQRSNLKTHLLTHT
Sbjct: 220 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHMEESPHKCPVCSRSFNQRSNLKTHLLTHT 279

Query: 81  DIKPYNCAACGKVFRRNCDLRRHSLTHNLGSATSTSSGSTTATLLSVSPTSFIVESMVNM 140
           DIKPYNC+ACGKVFRRNCDLRRHSLTHNLG++TST++        +    +F ++S+++ 
Sbjct: 280 DIKPYNCSACGKVFRRNCDLRRHSLTHNLGTSTSTAA--------TAGAQNFTIDSIMSK 331

Query: 141 EK 142
           +K
Sbjct: 332 DK 333

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170049194|ref|XP_001854444.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167871068|gb|EDS34451.1| conserved hypothetical protein [Culex quinquefasciatus]

 Score =  197 bits (502), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 87/93 (93%), Positives = 90/93 (96%)

Query: 21  YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHT 80
           YIHSKEKPFKC ECGKGFCQSRTLAVHKILH+EESPHKCPVCSRSFNQRSNLKTHLLTHT
Sbjct: 288 YIHSKEKPFKCLECGKGFCQSRTLAVHKILHMEESPHKCPVCSRSFNQRSNLKTHLLTHT 347

Query: 81  DIKPYNCAACGKVFRRNCDLRRHSLTHNLGSAT 113
           DIKPY+C ACGKVFRRNCDLRRHSLTHNLG+ T
Sbjct: 348 DIKPYHCGACGKVFRRNCDLRRHSLTHNLGATT 380

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380021242|ref|XP_003694479.1| PREDICTED: uncharacterized protein LOC100863654 [Apis florea]

 Score =  196 bits (498), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 87/94 (92%), Positives = 92/94 (97%)

Query: 21  YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHT 80
           YIHSKEKPFKC ECGKGFCQSRTLAVHKILH+EESPHKCPVC+RSFNQRSNLKTHLLTHT
Sbjct: 312 YIHSKEKPFKCAECGKGFCQSRTLAVHKILHMEESPHKCPVCARSFNQRSNLKTHLLTHT 371

Query: 81  DIKPYNCAACGKVFRRNCDLRRHSLTHNLGSATS 114
           DIKPY+CA+CGKVFRRNCDLRRHSLTHNLG +TS
Sbjct: 372 DIKPYHCASCGKVFRRNCDLRRHSLTHNLGVSTS 405

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383857547|ref|XP_003704266.1| PREDICTED: zinc finger and SCAN domain-containing protein 2-like [Megachile rotundata]

 Score =  196 bits (497), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 87/94 (92%), Positives = 92/94 (97%)

Query: 21  YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHT 80
           YIHSKEKPFKC ECGKGFCQSRTLAVHKILH+EESPHKCPVC+RSFNQRSNLKTHLLTHT
Sbjct: 300 YIHSKEKPFKCAECGKGFCQSRTLAVHKILHMEESPHKCPVCARSFNQRSNLKTHLLTHT 359

Query: 81  DIKPYNCAACGKVFRRNCDLRRHSLTHNLGSATS 114
           DIKPY+CA+CGKVFRRNCDLRRHSLTHNLG +TS
Sbjct: 360 DIKPYHCASCGKVFRRNCDLRRHSLTHNLGVSTS 393

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195117268|ref|XP_002003171.1| GI17769 [Drosophila mojavensis] gi|193913746|gb|EDW12613.1| GI17769 [Drosophila mojavensis]

 Score =  196 bits (497), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 87/98 (88%), Positives = 91/98 (92%)

Query: 21  YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHT 80
           YIHSKEKPFKC ECGKGFCQSRTLAVHKILH+EESPHKCPVC+RSFNQRSNLKTHLLTHT
Sbjct: 507 YIHSKEKPFKCAECGKGFCQSRTLAVHKILHMEESPHKCPVCNRSFNQRSNLKTHLLTHT 566

Query: 81  DIKPYNCAACGKVFRRNCDLRRHSLTHNLGSATSTSSG 118
           DIKPYNCA+CGKVFRRNCDLRRHSLTHNL +    S G
Sbjct: 567 DIKPYNCASCGKVFRRNCDLRRHSLTHNLSATGGMSGG 604

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156545195|ref|XP_001603713.1| PREDICTED: hypothetical protein LOC100120032 [Nasonia vitripennis]

 Score =  195 bits (496), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 90/105 (85%), Positives = 98/105 (93%)

Query: 21  YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHT 80
           YIHSKEKPFKC ECGKGFCQSRTLAVHKILH+EESPHKCPVC+RSFNQRSNLKTHLLTHT
Sbjct: 263 YIHSKEKPFKCAECGKGFCQSRTLAVHKILHMEESPHKCPVCARSFNQRSNLKTHLLTHT 322

Query: 81  DIKPYNCAACGKVFRRNCDLRRHSLTHNLGSATSTSSGSTTATLL 125
           DIKPY+CA+CGKVFRRNCDLRRHSLTHNLGS  +++S S +  LL
Sbjct: 323 DIKPYHCASCGKVFRRNCDLRRHSLTHNLGSMHASTSPSASPGLL 367

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195387704|ref|XP_002052534.1| GJ17594 [Drosophila virilis] gi|194148991|gb|EDW64689.1| GJ17594 [Drosophila virilis]

 Score =  195 bits (496), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 85/91 (93%), Positives = 89/91 (97%)

Query: 21  YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHT 80
           YIHSKEKPFKC ECGKGFCQSRTLAVHKILH+EESPHKCPVC+RSFNQRSNLKTHLLTHT
Sbjct: 513 YIHSKEKPFKCAECGKGFCQSRTLAVHKILHMEESPHKCPVCNRSFNQRSNLKTHLLTHT 572

Query: 81  DIKPYNCAACGKVFRRNCDLRRHSLTHNLGS 111
           DIKPYNCA+CGKVFRRNCDLRRHSLTHNL +
Sbjct: 573 DIKPYNCASCGKVFRRNCDLRRHSLTHNLSA 603

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157116118|ref|XP_001652777.1| hypothetical protein AaeL_AAEL007453 [Aedes aegypti] gi|108876641|gb|EAT40866.1| AAEL007453-PA [Aedes aegypti]

 Score =  195 bits (496), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 87/91 (95%), Positives = 90/91 (98%)

Query: 21  YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHT 80
           YIHSKEKPFKC ECGKGFCQSRTLAVHKILH+EESPHKCPVCSRSFNQRSNLKTHLLTHT
Sbjct: 322 YIHSKEKPFKCLECGKGFCQSRTLAVHKILHMEESPHKCPVCSRSFNQRSNLKTHLLTHT 381

Query: 81  DIKPYNCAACGKVFRRNCDLRRHSLTHNLGS 111
           DIKPY+CAACGKVFRRNCDLRRHSLTHNLG+
Sbjct: 382 DIKPYHCAACGKVFRRNCDLRRHSLTHNLGA 412

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|110762341|ref|XP_001120905.1| PREDICTED: zinc finger and SCAN domain-containing protein 2-like [Apis mellifera]

 Score =  194 bits (494), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 87/94 (92%), Positives = 92/94 (97%)

Query: 21  YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHT 80
           YIHSKEKPFKC ECGKGFCQSRTLAVHKILH+EESPHKCPVC+RSFNQRSNLKTHLLTHT
Sbjct: 272 YIHSKEKPFKCAECGKGFCQSRTLAVHKILHMEESPHKCPVCARSFNQRSNLKTHLLTHT 331

Query: 81  DIKPYNCAACGKVFRRNCDLRRHSLTHNLGSATS 114
           DIKPY+CA+CGKVFRRNCDLRRHSLTHNLG +TS
Sbjct: 332 DIKPYHCASCGKVFRRNCDLRRHSLTHNLGVSTS 365

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	144
FB|FBgn0004892	578	sob "sister of odd and bowl" [	0.611	0.152	0.954	3e-46
FB|FBgn0004893	744	bowl "brother of odd with entr	0.604	0.116	0.931	6.2e-44
UNIPROTKB|E2QTV1	312	OSR2 "Uncharacterized protein"	0.604	0.278	0.885	1.5e-42
UNIPROTKB|B4E3B7	433	OSR2 "Protein odd-skipped-rela	0.604	0.200	0.885	1.5e-42
UNIPROTKB|Q8N2R0	312	OSR2 "Protein odd-skipped-rela	0.604	0.278	0.885	1.5e-42
MGI|MGI:1930813	312	Osr2 "odd-skipped related 2" [	0.604	0.278	0.885	1.5e-42
FB|FBgn0002985	392	odd "odd skipped" [Drosophila	0.423	0.155	0.770	8.4e-26
UNIPROTKB|F1MUM4	460	ZNF500 "Uncharacterized protei	0.597	0.186	0.476	6e-23
UNIPROTKB|A6NK75	572	ZNF98 "Zinc finger protein 98"	0.597	0.150	0.523	1.8e-22
UNIPROTKB|A6NK21	547	A6NK21 "Putative zinc finger p	0.597	0.157	0.523	2.1e-22

FB|FBgn0004892 sob "sister of odd and bowl" [Drosophila melanogaster (taxid:7227)]

 Score = 485 (175.8 bits), Expect = 3.0e-46, P = 3.0e-46
 Identities = 84/88 (95%), Positives = 87/88 (98%)

Query:    21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHT 80
             YIHSKEKPFKC ECGKGFCQSRTLAVHKILH+EESPHKCPVC+RSFNQRSNLKTHLLTHT
Sbjct:   443 YIHSKEKPFKCAECGKGFCQSRTLAVHKILHMEESPHKCPVCNRSFNQRSNLKTHLLTHT 502

Query:    81 DIKPYNCAACGKVFRRNCDLRRHSLTHN 108
             DIKPYNCA+CGKVFRRNCDLRRHSLTHN
Sbjct:   503 DIKPYNCASCGKVFRRNCDLRRHSLTHN 530

GO:0005634 "nucleus" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=ISS

GO:0000981 "sequence-specific DNA binding RNA polymerase II transcription factor activity" evidence=ISS

GO:0016348 "imaginal disc-derived leg joint morphogenesis" evidence=IMP

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0006911 "phagocytosis, engulfment" evidence=IMP

FB|FBgn0004893 bowl "brother of odd with entrails limited" [Drosophila melanogaster (taxid:7227)]

 Score = 468 (169.8 bits), Expect = 6.2e-44, P = 6.2e-44
 Identities = 81/87 (93%), Positives = 85/87 (97%)

Query:    21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHT 80
             YIHSKEKPFKCTECGKGFCQSRTLAVHKILH+EESPHKCPVCSRSFNQRSNLKTHLLTHT
Sbjct:   286 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHMEESPHKCPVCSRSFNQRSNLKTHLLTHT 345

Query:    81 DIKPYNCAACGKVFRRNCDLRRHSLTH 107
             D KPY C++CGKVFRRNCDLRRH+LTH
Sbjct:   346 DHKPYECSSCGKVFRRNCDLRRHALTH 372

GO:0007362 "terminal region determination" evidence=IMP

GO:0005634 "nucleus" evidence=ISS

GO:0000981 "sequence-specific DNA binding RNA polymerase II transcription factor activity" evidence=ISS

GO:0007442 "hindgut morphogenesis" evidence=IMP

GO:0007480 "imaginal disc-derived leg morphogenesis" evidence=IMP

GO:0016348 "imaginal disc-derived leg joint morphogenesis" evidence=IMP

GO:0048617 "embryonic foregut morphogenesis" evidence=IMP

GO:0048619 "embryonic hindgut morphogenesis" evidence=IMP

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0035220 "wing disc development" evidence=IMP

GO:0046331 "lateral inhibition" evidence=IMP

UNIPROTKB|E2QTV1 OSR2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 450 (163.5 bits), Expect = 1.5e-42, P = 1.5e-42
 Identities = 77/87 (88%), Positives = 81/87 (93%)

Query:    21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHT 80
             YIHSKEKPFKC ECGKGFCQSRTLAVHK LH++ESPHKCP C R+FNQRSNLKTHLLTHT
Sbjct:   220 YIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQESPHKCPTCGRTFNQRSNLKTHLLTHT 279

Query:    81 DIKPYNCAACGKVFRRNCDLRRHSLTH 107
             DIKPY+C  CGKVFRRNCDLRRHSLTH
Sbjct:   280 DIKPYSCEQCGKVFRRNCDLRRHSLTH 306

GO:0048704 "embryonic skeletal system morphogenesis" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:0050679 "positive regulation of epithelial cell proliferation" evidence=ISS

GO:0009790 "embryo development" evidence=ISS

GO:0001656 "metanephros development" evidence=ISS

GO:0043565 "sequence-specific DNA binding" evidence=ISS

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=ISS

GO:0060349 "bone morphogenesis" evidence=ISS

GO:0042474 "middle ear morphogenesis" evidence=ISS

GO:0010628 "positive regulation of gene expression" evidence=ISS

GO:0008284 "positive regulation of cell proliferation" evidence=ISS

GO:0001823 "mesonephros development" evidence=ISS

GO:0061029 "eyelid development in camera-type eye" evidence=ISS

GO:0060021 "palate development" evidence=ISS

GO:0042476 "odontogenesis" evidence=ISS

GO:0033687 "osteoblast proliferation" evidence=ISS

GO:2000543 "positive regulation of gastrulation" evidence=IEA

GO:0060322 "head development" evidence=IEA

GO:0048793 "pronephros development" evidence=IEA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0042733 "embryonic digit morphogenesis" evidence=IEA

GO:0036023 "embryonic skeletal limb joint morphogenesis" evidence=IEA

GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA

GO:0035115 "embryonic forelimb morphogenesis" evidence=IEA

GO:0030501 "positive regulation of bone mineralization" evidence=IEA

GO:0002062 "chondrocyte differentiation" evidence=IEA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|B4E3B7 OSR2 "Protein odd-skipped-related 2" [Homo sapiens (taxid:9606)]

 Score = 450 (163.5 bits), Expect = 1.5e-42, P = 1.5e-42
 Identities = 77/87 (88%), Positives = 81/87 (93%)

Query:    21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHT 80
             YIHSKEKPFKC ECGKGFCQSRTLAVHK LH++ESPHKCP C R+FNQRSNLKTHLLTHT
Sbjct:   341 YIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQESPHKCPTCGRTFNQRSNLKTHLLTHT 400

Query:    81 DIKPYNCAACGKVFRRNCDLRRHSLTH 107
             DIKPY+C  CGKVFRRNCDLRRHSLTH
Sbjct:   401 DIKPYSCEQCGKVFRRNCDLRRHSLTH 427

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|Q8N2R0 OSR2 "Protein odd-skipped-related 2" [Homo sapiens (taxid:9606)]

 Score = 450 (163.5 bits), Expect = 1.5e-42, P = 1.5e-42
 Identities = 77/87 (88%), Positives = 81/87 (93%)

Query:    21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHT 80
             YIHSKEKPFKC ECGKGFCQSRTLAVHK LH++ESPHKCP C R+FNQRSNLKTHLLTHT
Sbjct:   220 YIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQESPHKCPTCGRTFNQRSNLKTHLLTHT 279

Query:    81 DIKPYNCAACGKVFRRNCDLRRHSLTH 107
             DIKPY+C  CGKVFRRNCDLRRHSLTH
Sbjct:   280 DIKPYSCEQCGKVFRRNCDLRRHSLTH 306

GO:0008270 "zinc ion binding" evidence=IEA

GO:0048793 "pronephros development" evidence=IEA

GO:2000543 "positive regulation of gastrulation" evidence=IEA

GO:0001823 "mesonephros development" evidence=ISS

GO:0010628 "positive regulation of gene expression" evidence=ISS

GO:0042474 "middle ear morphogenesis" evidence=ISS

GO:0050679 "positive regulation of epithelial cell proliferation" evidence=ISS

GO:0060349 "bone morphogenesis" evidence=ISS

GO:0043565 "sequence-specific DNA binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:0048704 "embryonic skeletal system morphogenesis" evidence=ISS

GO:0001656 "metanephros development" evidence=ISS

GO:0009790 "embryo development" evidence=ISS

GO:0033687 "osteoblast proliferation" evidence=ISS

GO:0042476 "odontogenesis" evidence=ISS

GO:0060021 "palate development" evidence=ISS

GO:0061029 "eyelid development in camera-type eye" evidence=ISS

GO:0008284 "positive regulation of cell proliferation" evidence=ISS

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=ISS

GO:0072498 "embryonic skeletal joint development" evidence=ISS

GO:0060322 "head development" evidence=ISS

GO:0060272 "embryonic skeletal joint morphogenesis" evidence=ISS

GO:0036023 "embryonic skeletal limb joint morphogenesis" evidence=ISS

GO:0042733 "embryonic digit morphogenesis" evidence=ISS

GO:0035116 "embryonic hindlimb morphogenesis" evidence=ISS

GO:0035115 "embryonic forelimb morphogenesis" evidence=ISS

GO:0030501 "positive regulation of bone mineralization" evidence=ISS

GO:0030154 "cell differentiation" evidence=ISS

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=ISS

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=ISS

GO:0002062 "chondrocyte differentiation" evidence=ISS

MGI|MGI:1930813 Osr2 "odd-skipped related 2" [Mus musculus (taxid:10090)]

 Score = 450 (163.5 bits), Expect = 1.5e-42, P = 1.5e-42
 Identities = 77/87 (88%), Positives = 81/87 (93%)

Query:    21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHT 80
             YIHSKEKPFKC ECGKGFCQSRTLAVHK LH++ESPHKCP C R+FNQRSNLKTHLLTHT
Sbjct:   220 YIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQESPHKCPTCGRTFNQRSNLKTHLLTHT 279

Query:    81 DIKPYNCAACGKVFRRNCDLRRHSLTH 107
             DIKPY+C  CGKVFRRNCDLRRHSLTH
Sbjct:   280 DIKPYSCEQCGKVFRRNCDLRRHSLTH 306

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IGI

GO:0002062 "chondrocyte differentiation" evidence=IGI

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0008284 "positive regulation of cell proliferation" evidence=IMP

GO:0010628 "positive regulation of gene expression" evidence=IMP

GO:0030154 "cell differentiation" evidence=IGI

GO:0030501 "positive regulation of bone mineralization" evidence=IGI

GO:0033687 "osteoblast proliferation" evidence=IMP

GO:0035115 "embryonic forelimb morphogenesis" evidence=IGI

GO:0035116 "embryonic hindlimb morphogenesis" evidence=IGI

GO:0036023 "embryonic skeletal limb joint morphogenesis" evidence=IGI

GO:0042474 "middle ear morphogenesis" evidence=IMP

GO:0042476 "odontogenesis" evidence=IMP

GO:0042733 "embryonic digit morphogenesis" evidence=IGI

GO:0043565 "sequence-specific DNA binding" evidence=IDA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IMP

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IGI

GO:0046872 "metal ion binding" evidence=IEA

GO:0048704 "embryonic skeletal system morphogenesis" evidence=IMP

GO:0048793 "pronephros development" evidence=IMP

GO:0050679 "positive regulation of epithelial cell proliferation" evidence=IMP

GO:0060021 "palate development" evidence=IMP

GO:0060272 "embryonic skeletal joint morphogenesis" evidence=IMP

GO:0060322 "head development" evidence=IMP

GO:0060349 "bone morphogenesis" evidence=IMP

GO:0061029 "eyelid development in camera-type eye" evidence=IMP

GO:0072498 "embryonic skeletal joint development" evidence=IGI

GO:2000543 "positive regulation of gastrulation" evidence=IMP

FB|FBgn0002985 odd "odd skipped" [Drosophila melanogaster (taxid:7227)]

 Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
 Identities = 47/61 (77%), Positives = 57/61 (93%)

Query:    21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHT 80
             YIHSK+KPFKC++CGKGFCQSRTLAVHK+ HLEE PHKCP+C RSFNQR+NLK+HL +H+
Sbjct:   268 YIHSKDKPFKCSDCGKGFCQSRTLAVHKVTHLEEGPHKCPICQRSFNQRANLKSHLQSHS 327

Query:    81 D 81
             +
Sbjct:   328 E 328

GO:0005634 "nucleus" evidence=ISS;NAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=ISS

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IDA;IMP

GO:0007366 "periodic partitioning by pair rule gene" evidence=NAS;IMP

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IDA

GO:0016348 "imaginal disc-derived leg joint morphogenesis" evidence=IMP

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|F1MUM4 ZNF500 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 251 (93.4 bits), Expect = 6.0e-23, Sum P(2) = 6.0e-23
 Identities = 41/86 (47%), Positives = 55/86 (63%)

Query:    22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTD 81
             +H+ EKP+ C ECGK F QS +L +H+  H  E P++C +C + FN  S+   H  THT 
Sbjct:   355 VHTGEKPYACAECGKRFSQSSSLVIHRRTHTGERPYQCQLCGKRFNNSSHFSAHRRTHTG 414

Query:    82 IKPYNCAACGKVFRRNCDLRRHSLTH 107
              KP+ C ACG+ FRR  DLR+H  TH
Sbjct:   415 EKPHTCPACGRGFRRGTDLRKHQRTH 440

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0016032 "viral reproduction" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|A6NK75 ZNF98 "Zinc finger protein 98" [Homo sapiens (taxid:9606)]

 Score = 268 (99.4 bits), Expect = 1.8e-22, P = 1.8e-22
 Identities = 45/86 (52%), Positives = 57/86 (66%)

Query:    22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTD 81
             IH+ EKP+KC ECGK F QS TL+ HK++H  E P+KC  C ++FNQ S+L TH + HT 
Sbjct:   455 IHTGEKPYKCEECGKAFNQSSTLSKHKVIHTGEKPYKCEECGKAFNQSSHLTTHKMIHTG 514

Query:    82 IKPYNCAACGKVFRRNCDLRRHSLTH 107
              KPY C  CGK F  +  L RH + H
Sbjct:   515 EKPYKCEECGKAFNNSSILNRHKMIH 540

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|A6NK21 A6NK21 "Putative zinc finger protein LOC730110" [Homo sapiens (taxid:9606)]

 Score = 267 (99.0 bits), Expect = 2.1e-22, P = 2.1e-22
 Identities = 45/86 (52%), Positives = 57/86 (66%)

Query:    22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTD 81
             IH+ EKP+KC ECGK F QS TL+ HK++H  E P+KC  C ++FNQ S+L TH + HT 
Sbjct:   420 IHTGEKPYKCEECGKAFNQSSTLSKHKVIHTGEKPYKCGECGKAFNQSSHLTTHKIIHTG 479

Query:    82 IKPYNCAACGKVFRRNCDLRRHSLTH 107
              KPY C  CGK F  +  L RH + H
Sbjct:   480 EKPYKCEECGKAFNNSSILNRHKMIH 505

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9VQS7	SOB_DROME	No assigned EC number	0.9340	0.6319	0.1574	yes	N/A
Q91ZD1	OSR2_MOUSE	No assigned EC number	0.8850	0.5972	0.2756	yes	N/A
Q8N2R0	OSR2_HUMAN	No assigned EC number	0.8850	0.5972	0.2756	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	144
KOG2462|consensus	279		99.83
KOG2462|consensus	279		99.79
KOG3576|consensus	267		99.58
KOG3623|consensus	1007		99.51
KOG1074|consensus	958		99.43
KOG3576|consensus	267		99.37
KOG3623|consensus	1007		99.33
KOG1074|consensus	958		99.22
PHA00733	128	hypothetical protein	99.19
KOG3608|consensus	467		98.99
KOG3608|consensus	467		98.94
PHA02768	55	hypothetical protein; Provisional	98.92
KOG3993|consensus	500		98.9
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.72
PHA02768	55	hypothetical protein; Provisional	98.72
PLN03086	567	PRLI-interacting factor K; Provisional	98.7
PHA00733	128	hypothetical protein	98.57
PLN03086	567	PRLI-interacting factor K; Provisional	98.44
PHA00616	44	hypothetical protein	98.41
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.34
PHA00732	79	hypothetical protein	98.28
PHA00616	44	hypothetical protein	98.15
PHA00732	79	hypothetical protein	98.12
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.09
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.03
KOG3993|consensus	500		98.0
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.94
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.93
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.88
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.84
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.79
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.61
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.57
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.39
smart00355	26	ZnF_C2H2 zinc finger.	97.39
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.96
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.82
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.82
smart00355	26	ZnF_C2H2 zinc finger.	96.78
PRK04860	160	hypothetical protein; Provisional	96.72
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.71
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.5
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.42
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.2
PRK04860	160	hypothetical protein; Provisional	95.94
KOG4173|consensus	253		95.83
KOG1146|consensus	1406		95.66
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.61
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	95.46
COG4049	65	Uncharacterized protein containing archaeal-type C	94.77
KOG1146|consensus	1406		93.9
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	93.9
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	93.55
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	93.22
COG4049	65	Uncharacterized protein containing archaeal-type C	93.08
COG5236	493	Uncharacterized conserved protein, contains RING Z	93.07
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	92.63
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	91.72
KOG2482|consensus	423		91.11
COG1592	166	Rubrerythrin [Energy production and conversion]	91.03
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	90.51
KOG2231|consensus	669		90.33
KOG2893|consensus	341		89.77
COG5048	467	FOG: Zn-finger [General function prediction only]	89.7
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	88.93
COG1592	166	Rubrerythrin [Energy production and conversion]	88.66
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	88.6
COG5048	467	FOG: Zn-finger [General function prediction only]	88.59
KOG2893|consensus	341		88.18
COG5189	423	SFP1 Putative transcriptional repressor regulating	87.48
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	87.23
KOG2482|consensus	423		85.92
PF02892	45	zf-BED: BED zinc finger; InterPro: IPR003656 Zinc	85.78
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	85.59
TIGR02300	129	FYDLN_acid conserved hypothetical protein TIGR0230	84.9
KOG2186|consensus	276		84.62
PF05443	132	ROS_MUCR: ROS/MUCR transcriptional regulator prote	83.01
KOG2231|consensus	669		82.92
KOG2186|consensus	276		82.9
COG5236	493	Uncharacterized conserved protein, contains RING Z	82.84
smart00614	50	ZnF_BED BED zinc finger. DNA-binding domain in chr	82.11
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	82.08
PRK06266	178	transcription initiation factor E subunit alpha; V	81.86
KOG2785|consensus	390		81.76
KOG3408|consensus	129		80.88
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	80.85

>KOG2462|consensus

Probab=99.83  E-value=7.6e-21  Score=128.41  Aligned_cols=86  Identities=35%  Similarity=0.692  Sum_probs=76.9

Q ss_pred             CCcccccccccccCChHHHHHHHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcchhhhcChHHHHHhHh
Q psy6676          26 EKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCDLRRHSL  105 (144)
Q Consensus        26 ~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  105 (144)
                      ++-+.|++|++.|.....|..|+++|.  .++.|.+||+.|...+.|+.|+|.|+||+||.|..|+|+|...++|+.|++
T Consensus       159 ~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQ  236 (279)
T KOG2462|consen  159 KKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQ  236 (279)
T ss_pred             cccccCCCCCceeeehHHHhhHhhccC--CCcccccccccccchHHhhcccccccCCCCccCCcccchhcchHHHHHHHH
Confidence            566889999999999999999999986  578999999999999999999999999999999999999999999999999


Q ss_pred             hccCCCCC
Q psy6676         106 THNLGSAT  113 (144)
Q Consensus       106 ~h~~~~~~  113 (144)
                      +|......
T Consensus       237 THS~~K~~  244 (279)
T KOG2462|consen  237 THSDVKKH  244 (279)
T ss_pred             hhcCCccc
Confidence            99876543

>KOG2462|consensus

Probab=99.79  E-value=1.3e-19  Score=122.42  Aligned_cols=87  Identities=38%  Similarity=0.735  Sum_probs=80.6

Q ss_pred             CCCCcccccccccccCChHHHHHHHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcchhhhcChHHHHHh
Q psy6676          24 SKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCDLRRH  103 (144)
Q Consensus        24 ~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H  103 (144)
                      ...-+++|.+||+.|-..=-|+.|+++|+|++||.|+.|++.|...++|+-||++|.+.++|.|..|+|.|...+.|.+|
T Consensus       183 TH~l~c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH  262 (279)
T KOG2462|consen  183 THTLPCECGICGKAFSRPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKH  262 (279)
T ss_pred             ccCCCcccccccccccchHHhhcccccccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHh
Confidence            34478999999999999888999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhccCC
Q psy6676         104 SLTHNLG  110 (144)
Q Consensus       104 ~~~h~~~  110 (144)
                      ....-..
T Consensus       263 ~ES~C~~  269 (279)
T KOG2462|consen  263 SESACLK  269 (279)
T ss_pred             hhhcccc
Confidence            9764433

>KOG3576|consensus

Probab=99.58  E-value=4.6e-16  Score=101.22  Aligned_cols=87  Identities=36%  Similarity=0.702  Sum_probs=79.6

Q ss_pred             CCCCcccccccccccCChHHHHHHHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcchhhhcChHHHHHh
Q psy6676          24 SKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCDLRRH  103 (144)
Q Consensus        24 ~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H  103 (144)
                      .+.-.|.|.+|++.|....-|.+|++.|...+.+.|..||+.|...-.|.+|++.|+|.+||+|..|+|+|+..-.|..|
T Consensus       113 sd~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcslesh  192 (267)
T KOG3576|consen  113 SDQDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESH  192 (267)
T ss_pred             CCCCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHH
Confidence            34556899999999999999999999999889999999999999999999999999999999999999999999999999


Q ss_pred             HhhccCC
Q psy6676         104 SLTHNLG  110 (144)
Q Consensus       104 ~~~h~~~  110 (144)
                      ++.-|..
T Consensus       193 l~kvhgv  199 (267)
T KOG3576|consen  193 LKKVHGV  199 (267)
T ss_pred             HHHHcCc
Confidence            9765533

>KOG3623|consensus

Probab=99.51  E-value=5.4e-15  Score=111.37  Aligned_cols=80  Identities=29%  Similarity=0.652  Sum_probs=76.6

Q ss_pred             CCcccccccccccCChHHHHHHHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcchhhhcChHHHHHhHh
Q psy6676          26 EKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCDLRRHSL  105 (144)
Q Consensus        26 ~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  105 (144)
                      ...|.|..|++.|--...|.+|.-.|.|.+||.|.+|.+.|..+-.|..|+|.|.|++||.|.+|+|.|+....+.+|+.
T Consensus       892 ~gmyaCDqCDK~FqKqSSLaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCdKClKRFSHSGSYSQHMN  971 (1007)
T KOG3623|consen  892 DGMYACDQCDKAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCDKCLKRFSHSGSYSQHMN  971 (1007)
T ss_pred             cccchHHHHHHHHHhhHHHHHhhhhhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCcchhhhhhhhcccccchHhhhc
Confidence            46799999999999999999999999999999999999999999999999999999999999999999999999999984

>KOG1074|consensus

Probab=99.43  E-value=1.5e-13  Score=104.89  Aligned_cols=60  Identities=33%  Similarity=0.619  Sum_probs=56.4

Q ss_pred             cccccccccccCchHHHHHHhhcCCCCCcccCcchhhhcChHHHHHhHhhccCCCCCCCC
Q psy6676          57 HKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTHNLGSATSTS  116 (144)
Q Consensus        57 ~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  116 (144)
                      ..|.+|++.|.....|..|+++|+++++|.|.+|++.|....+|+.|+.+|++......-
T Consensus       880 h~C~vCgk~FsSSsALqiH~rTHtg~KPF~C~fC~~aFttrgnLKvHMgtH~w~q~~srr  939 (958)
T KOG1074|consen  880 HVCNVCGKQFSSSAALEIHMRTHTGPKPFFCHFCEEAFTTRGNLKVHMGTHMWVQPPSRR  939 (958)
T ss_pred             hhhccchhcccchHHHHHhhhcCCCCCCccchhhhhhhhhhhhhhhhhccccccCCCccC
Confidence            679999999999999999999999999999999999999999999999999998776655

>KOG3576|consensus

Probab=99.37  E-value=1.5e-13  Score=89.65  Aligned_cols=93  Identities=34%  Similarity=0.523  Sum_probs=83.5

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccccccccCchHHHHHHhhcCC-----------CCCcccCc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTD-----------IKPYNCAA   89 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~-----------~~~~~C~~   89 (144)
                      +.|+..+.|.|..||+.|.+.-+|.+|+++|+|.+||+|..|++.|...-.|..|.+.-++           .+.|+|..
T Consensus       138 kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~kvhgv~~~yaykerr~kl~vced  217 (267)
T KOG3576|consen  138 KCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLKKVHGVQHQYAYKERRAKLYVCED  217 (267)
T ss_pred             hhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHHHHcCchHHHHHHHhhhheeeecc
Confidence            6788899999999999999999999999999999999999999999999999999864333           35689999


Q ss_pred             chhhhcChHHHHHhHhhccCCCCC
Q psy6676          90 CGKVFRRNCDLRRHSLTHNLGSAT  113 (144)
Q Consensus        90 C~~~f~~~~~l~~H~~~h~~~~~~  113 (144)
                      ||.+-.....+..|++.||..++.
T Consensus       218 cg~t~~~~e~~~~h~~~~hp~Spa  241 (267)
T KOG3576|consen  218 CGYTSERPEVYYLHLKLHHPFSPA  241 (267)
T ss_pred             cCCCCCChhHHHHHHHhcCCCCHH
Confidence            999999999999999999977654

>KOG3623|consensus

Probab=99.33  E-value=6.6e-13  Score=100.37  Aligned_cols=81  Identities=31%  Similarity=0.613  Sum_probs=71.4

Q ss_pred             CCcccccccccccCChHHHHHHHHHhCCC-------------CCcccccccccccCchHHHHHHhhcCCCCCcccCcchh
Q psy6676          26 EKPFKCTECGKGFCQSRTLAVHKILHLEE-------------SPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGK   92 (144)
Q Consensus        26 ~~~~~C~~C~~~f~~~~~l~~h~~~~~~~-------------~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~   92 (144)
                      +..|.|..|..+|.+...|.+|+..|...             +.|+|..|++.|..+-.|+.|+|+|.|++||.|..|+|
T Consensus       238 e~nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtECgKAFKfKHHLKEHlRIHSGEKPfeCpnCkK  317 (1007)
T KOG3623|consen  238 EPNFSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTECGKAFKFKHHLKEHLRIHSGEKPFECPNCKK  317 (1007)
T ss_pred             CCCCcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccccccchhhhhHHHHHhhheeecCCCCcCCccccc
Confidence            45588999999999999999998877432             44999999999999999999999999999999999999


Q ss_pred             hhcChHHHHHhHhh
Q psy6676          93 VFRRNCDLRRHSLT  106 (144)
Q Consensus        93 ~f~~~~~l~~H~~~  106 (144)
                      .|+....+..|+..
T Consensus       318 RFSHSGSySSHmSS  331 (1007)
T KOG3623|consen  318 RFSHSGSYSSHMSS  331 (1007)
T ss_pred             ccccCCcccccccc
Confidence            99999999999853

>KOG1074|consensus

Probab=99.22  E-value=3.1e-12  Score=97.97  Aligned_cols=88  Identities=30%  Similarity=0.594  Sum_probs=79.3

Q ss_pred             CCCcccccccccccCChHHHHHHHHHhCCCCCcccccccccccCchHHHHHHhhcCCC----CCcccC---cchhhhcCh
Q psy6676          25 KEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDI----KPYNCA---ACGKVFRRN   97 (144)
Q Consensus        25 ~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~----~~~~C~---~C~~~f~~~   97 (144)
                      ...|..|-+|.+..-....|+.|+++|+|++||+|.+|++.|..+.+|+.|+..|...    ..+.|+   +|-+.|...
T Consensus       602 ~TdPNqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~  681 (958)
T KOG1074|consen  602 RTDPNQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNA  681 (958)
T ss_pred             cCCccceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhccccccc
Confidence            3466889999999999999999999999999999999999999999999999888654    447899   999999999


Q ss_pred             HHHHHhHhhccCCCC
Q psy6676          98 CDLRRHSLTHNLGSA  112 (144)
Q Consensus        98 ~~l~~H~~~h~~~~~  112 (144)
                      -.|..|.++|..+..
T Consensus       682 V~lpQhIriH~~~~~  696 (958)
T KOG1074|consen  682 VTLPQHIRIHLGGQI  696 (958)
T ss_pred             ccccceEEeecCCCC
Confidence            999999999985433

>PHA00733 hypothetical protein

Probab=99.19  E-value=2.1e-11  Score=75.82  Aligned_cols=84  Identities=21%  Similarity=0.312  Sum_probs=70.1

Q ss_pred             CCCcccccccccccCChHHHHHH--H---HHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcchhhhcChHH
Q psy6676          25 KEKPFKCTECGKGFCQSRTLAVH--K---ILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCD   99 (144)
Q Consensus        25 ~~~~~~C~~C~~~f~~~~~l~~h--~---~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~   99 (144)
                      .++++.|..|...|.....|..+  .   ..+.+.++|.|..|++.|.....|..|++.+  ..+|.|..|++.|.....
T Consensus        37 ~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~s  114 (128)
T PHA00733         37 EQKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTDS  114 (128)
T ss_pred             hhhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHHH
Confidence            36779999999999887777665  1   1234467899999999999999999999876  357999999999999999


Q ss_pred             HHHhHhhccCC
Q psy6676         100 LRRHSLTHNLG  110 (144)
Q Consensus       100 l~~H~~~h~~~  110 (144)
                      |..|+...|..
T Consensus       115 L~~H~~~~h~~  125 (128)
T PHA00733        115 TLDHVCKKHNI  125 (128)
T ss_pred             HHHHHHHhcCc
Confidence            99999887643

>KOG3608|consensus

Probab=98.99  E-value=1.2e-09  Score=77.05  Aligned_cols=90  Identities=29%  Similarity=0.554  Sum_probs=55.5

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCccccc--ccccccCchHHHHHHhhcC-C--CCCcccCcchhhhc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPV--CSRSFNQRSNLKTHLLTHT-D--IKPYNCAACGKVFR   95 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~--C~~~~~~~~~l~~h~~~h~-~--~~~~~C~~C~~~f~   95 (144)
                      ..|+..+||+|..|+..+.++.+|..|+.+|. ...|.|..  |...+.+...+..|++.+. +  ..+|.|-.|.+.|+
T Consensus       285 ~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS-~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~~Y~CH~Cdr~ft  363 (467)
T KOG3608|consen  285 YRHSKDKPFKCDECDTRCVRESDLAKHVQVHS-KTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPILYACHCCDRFFT  363 (467)
T ss_pred             hhhccCCCccccchhhhhccHHHHHHHHHhcc-ccceecCCCCCcHHHHHHHHHHHHHHHhccCCCCCceeeecchhhhc
Confidence            44566666666666666666666666666555 44566655  6666666666666665432 2  33466777777777


Q ss_pred             ChHHHHHhHhhccCCC
Q psy6676          96 RNCDLRRHSLTHNLGS  111 (144)
Q Consensus        96 ~~~~l~~H~~~h~~~~  111 (144)
                      +..+|..|+...|...
T Consensus       364 ~G~~L~~HL~kkH~f~  379 (467)
T KOG3608|consen  364 SGKSLSAHLMKKHGFR  379 (467)
T ss_pred             cchhHHHHHHHhhccc
Confidence            7777777766555443

>KOG3608|consensus

Probab=98.94  E-value=9.2e-10  Score=77.56  Aligned_cols=90  Identities=26%  Similarity=0.510  Sum_probs=80.2

Q ss_pred             CCCCcccccccccccCChHHHHHHHHH-hCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCc--chhhhcChHHH
Q psy6676          24 SKEKPFKCTECGKGFCQSRTLAVHKIL-HLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAA--CGKVFRRNCDL  100 (144)
Q Consensus        24 ~~~~~~~C~~C~~~f~~~~~l~~h~~~-~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~--C~~~f~~~~~l  100 (144)
                      .....|+|+.|+........|..|++. |...+||+|..|...|.....|..|...|. +..|.|..  |...|.+...+
T Consensus       259 rHvn~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS-~~~y~C~h~~C~~s~r~~~q~  337 (467)
T KOG3608|consen  259 RHVNCYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHS-KTVYQCEHPDCHYSVRTYTQM  337 (467)
T ss_pred             HhhhcccccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhcc-ccceecCCCCCcHHHHHHHHH
Confidence            345679999999999999999999875 777899999999999999999999999888 68899987  99999999999


Q ss_pred             HHhHhhccCCCCCC
Q psy6676         101 RRHSLTHNLGSATS  114 (144)
Q Consensus       101 ~~H~~~h~~~~~~~  114 (144)
                      .+|.+-++.+..+.
T Consensus       338 ~~H~~evhEg~np~  351 (467)
T KOG3608|consen  338 RRHFLEVHEGNNPI  351 (467)
T ss_pred             HHHHHHhccCCCCC
Confidence            99999888665543

>PHA02768 hypothetical protein; Provisional

Probab=98.92  E-value=4.5e-10  Score=58.69  Aligned_cols=42  Identities=24%  Similarity=0.597  Sum_probs=31.3

Q ss_pred             cccccccccccCchHHHHHHhhcCCCCCcccCcchhhhcChHHH
Q psy6676          57 HKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCDL  100 (144)
Q Consensus        57 ~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l  100 (144)
                      |.|+.||+.|.....|..|++.|+  ++|+|..|++.|...+.|
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEY   47 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceeccccee
Confidence            677777777777777777777776  577777788777766554

>KOG3993|consensus

Probab=98.90  E-value=2.8e-10  Score=81.64  Aligned_cols=86  Identities=30%  Similarity=0.617  Sum_probs=72.5

Q ss_pred             ccccccccccCChHHHHHHHHHhCCCCCcccccccccccCchHHHHHHhhcCC---------------------------
Q psy6676          29 FKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTD---------------------------   81 (144)
Q Consensus        29 ~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~---------------------------   81 (144)
                      |+|+.|...|.+--.|.+|.-.-....-|+|+.|++.|....+|..|+|+|--                           
T Consensus       268 yiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~r  347 (500)
T KOG3993|consen  268 YICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAER  347 (500)
T ss_pred             HHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhccc
Confidence            99999999999999999996544444569999999999999999999998831                           


Q ss_pred             ------CCCcccCcchhhhcChHHHHHhHhhccCCCCCC
Q psy6676          82 ------IKPYNCAACGKVFRRNCDLRRHSLTHNLGSATS  114 (144)
Q Consensus        82 ------~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  114 (144)
                            +..|.|..|+|.|.+...|+.|+.+|+......
T Consensus       348 sg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k  386 (500)
T KOG3993|consen  348 SGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAK  386 (500)
T ss_pred             cCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccch
Confidence                  124899999999999999999999888654433

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.72  E-value=5.8e-09  Score=46.77  Aligned_cols=25  Identities=56%  Similarity=1.084  Sum_probs=19.3

Q ss_pred             HHHHHHhhcCCCCCcccCcchhhhc
Q psy6676          71 NLKTHLLTHTDIKPYNCAACGKVFR   95 (144)
Q Consensus        71 ~l~~h~~~h~~~~~~~C~~C~~~f~   95 (144)
                      +|..|++.|+++++|.|..|++.|.
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEES
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeC
Confidence            3677888888888888888887775

...

>PHA02768 hypothetical protein; Provisional

Probab=98.72  E-value=8.4e-09  Score=53.95  Aligned_cols=43  Identities=19%  Similarity=0.406  Sum_probs=38.2

Q ss_pred             cccccccccccCChHHHHHHHHHhCCCCCcccccccccccCchHH
Q psy6676          28 PFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNL   72 (144)
Q Consensus        28 ~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l   72 (144)
                      .|.|+.||+.|.....|..|++.|.  +++.|..|++.|...+.|
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEY   47 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceeccccee
Confidence            4799999999999999999999998  689999999998765544

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.70  E-value=3.3e-08  Score=74.73  Aligned_cols=78  Identities=18%  Similarity=0.517  Sum_probs=64.5

Q ss_pred             CCCcccccccccccCChHHHHHHHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcchhhhcC--------
Q psy6676          25 KEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRR--------   96 (144)
Q Consensus        25 ~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~--------   96 (144)
                      ..+++.|+.|+..|. ...|..|+..++  .++.|+ |+..+ ....|..|+..|...+++.|..|++.|..        
T Consensus       450 l~~H~~C~~Cgk~f~-~s~LekH~~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~  524 (567)
T PLN03086        450 AKNHVHCEKCGQAFQ-QGEMEKHMKVFH--EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVR  524 (567)
T ss_pred             cccCccCCCCCCccc-hHHHHHHHHhcC--CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchh
Confidence            346678999999985 677999998875  779999 99755 56889999999999999999999998852        


Q ss_pred             --hHHHHHhHhhc
Q psy6676          97 --NCDLRRHSLTH  107 (144)
Q Consensus        97 --~~~l~~H~~~h  107 (144)
                        ...|..|...+
T Consensus       525 d~~s~Lt~HE~~C  537 (567)
T PLN03086        525 DRLRGMSEHESIC  537 (567)
T ss_pred             hhhhhHHHHHHhc
Confidence              35788998875

>PHA00733 hypothetical protein

Probab=98.57  E-value=1.2e-07  Score=59.05  Aligned_cols=57  Identities=25%  Similarity=0.519  Sum_probs=50.0

Q ss_pred             cCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccccccccCchHHHHHHhhcCC
Q psy6676          23 HSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTD   81 (144)
Q Consensus        23 h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~   81 (144)
                      +.+.+||.|+.|++.|.+...|..|+..+  ..++.|..|++.|.....|..|+...++
T Consensus        68 ~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733         68 SKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             cCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHHHHHHHHHHhcC
Confidence            34588999999999999999999998876  3469999999999999999999986554

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.44  E-value=2.4e-07  Score=70.15  Aligned_cols=78  Identities=15%  Similarity=0.419  Sum_probs=64.9

Q ss_pred             CcccccccccccCChHHHHHHHHHhCCCCCcccccccccccC----------chHHHHHHhhcCCCCCcccCcchhhhcC
Q psy6676          27 KPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQ----------RSNLKTHLLTHTDIKPYNCAACGKVFRR   96 (144)
Q Consensus        27 ~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~----------~~~l~~h~~~h~~~~~~~C~~C~~~f~~   96 (144)
                      +++.|+ |+..+ ....|..|...|-..+++.|..|+..+..          ...|..|+... +.+++.|..||+.+..
T Consensus       477 kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~C-G~rt~~C~~Cgk~Vrl  553 (567)
T PLN03086        477 EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESIC-GSRTAPCDSCGRSVML  553 (567)
T ss_pred             CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHhc-CCcceEccccCCeeee
Confidence            789999 99755 66889999999999999999999998842          35788998875 8899999999987766


Q ss_pred             hHHHHHhHhhcc
Q psy6676          97 NCDLRRHSLTHN  108 (144)
Q Consensus        97 ~~~l~~H~~~h~  108 (144)
                      . .+..|+-..|
T Consensus       554 r-dm~~H~~~~h  564 (567)
T PLN03086        554 K-EMDIHQIAVH  564 (567)
T ss_pred             h-hHHHHHHHhh
Confidence            5 6788886654

>PHA00616 hypothetical protein

Probab=98.41  E-value=1.6e-07  Score=46.85  Aligned_cols=35  Identities=14%  Similarity=0.321  Sum_probs=29.9

Q ss_pred             cccccccccccCChHHHHHHHHHhCCCCCcccccc
Q psy6676          28 PFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVC   62 (144)
Q Consensus        28 ~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C   62 (144)
                      ||.|+.||+.|.....|..|++.+++.+++.|..-
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~~   35 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLEYF   35 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccceeEE
Confidence            57899999999999999999999998888887653

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.34  E-value=4.4e-07  Score=40.56  Aligned_cols=25  Identities=44%  Similarity=0.822  Sum_probs=21.0

Q ss_pred             HHHHHHHHhCCCCCccccccccccc
Q psy6676          43 TLAVHKILHLEESPHKCPVCSRSFN   67 (144)
Q Consensus        43 ~l~~h~~~~~~~~~~~C~~C~~~~~   67 (144)
                      +|..|++.|.+.++|.|+.|++.|.
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEES
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeC
Confidence            4778888898888999999988875

...

>PHA00732 hypothetical protein

Probab=98.28  E-value=5.7e-07  Score=51.18  Aligned_cols=47  Identities=34%  Similarity=0.646  Sum_probs=34.7

Q ss_pred             cccccccccccCChHHHHHHHHH-hCCCCCcccccccccccCchHHHHHHhhcC
Q psy6676          28 PFKCTECGKGFCQSRTLAVHKIL-HLEESPHKCPVCSRSFNQRSNLKTHLLTHT   80 (144)
Q Consensus        28 ~~~C~~C~~~f~~~~~l~~h~~~-~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~   80 (144)
                      ||.|..|++.|.....|..|++. |.   ++.|..|++.|.   .+..|.+...
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~---~l~~H~~~~~   48 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT---LTKCPVCNKSYR---RLNQHFYSQY   48 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC---CCccCCCCCEeC---ChhhhhcccC
Confidence            57788888888888888888874 43   357888888886   3667775443

>PHA00616 hypothetical protein

Probab=98.15  E-value=1.9e-06  Score=43.00  Aligned_cols=28  Identities=29%  Similarity=0.681  Sum_probs=16.5

Q ss_pred             CcccCcchhhhcChHHHHHhHhhccCCC
Q psy6676          84 PYNCAACGKVFRRNCDLRRHSLTHNLGS  111 (144)
Q Consensus        84 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~  111 (144)
                      +|+|..||+.|...+.|..|++.||...
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~   28 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQN   28 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCC
Confidence            3556666666666666666666655543

>PHA00732 hypothetical protein

Probab=98.12  E-value=2.9e-06  Score=48.31  Aligned_cols=48  Identities=31%  Similarity=0.555  Sum_probs=39.6

Q ss_pred             CcccccccccccCchHHHHHHhh-cCCCCCcccCcchhhhcChHHHHHhHhhccC
Q psy6676          56 PHKCPVCSRSFNQRSNLKTHLLT-HTDIKPYNCAACGKVFRRNCDLRRHSLTHNL  109 (144)
Q Consensus        56 ~~~C~~C~~~~~~~~~l~~h~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  109 (144)
                      +|.|..|++.|.....|..|++. |.   ++.|..|++.|.   .+..|.++..+
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~---~l~~H~~~~~~   49 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT---LTKCPVCNKSYR---RLNQHFYSQYD   49 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC---CCccCCCCCEeC---ChhhhhcccCC
Confidence            47899999999999999999984 54   368999999998   47778766543

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.09  E-value=1.5e-06  Score=37.59  Aligned_cols=23  Identities=43%  Similarity=1.002  Sum_probs=18.8

Q ss_pred             cccCcchhhhcChHHHHHhHhhc
Q psy6676          85 YNCAACGKVFRRNCDLRRHSLTH  107 (144)
Q Consensus        85 ~~C~~C~~~f~~~~~l~~H~~~h  107 (144)
                      |.|..|++.|.+...|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            57888888888888888888763

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.03  E-value=1.3e-05  Score=42.34  Aligned_cols=35  Identities=31%  Similarity=0.591  Sum_probs=17.3

Q ss_pred             ccccccccccCChHHHHHHHHHhCC--CCCcccccccc
Q psy6676          29 FKCTECGKGFCQSRTLAVHKILHLE--ESPHKCPVCSR   64 (144)
Q Consensus        29 ~~C~~C~~~f~~~~~l~~h~~~~~~--~~~~~C~~C~~   64 (144)
                      |.||+|++ ..+...|..|+...+.  .+.+.|++|..
T Consensus         3 f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~   39 (54)
T PF05605_consen    3 FTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSS   39 (54)
T ss_pred             cCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchh
Confidence            55666666 4445556666443222  12345555544

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>KOG3993|consensus

Probab=98.00  E-value=4.4e-06  Score=60.63  Aligned_cols=53  Identities=32%  Similarity=0.683  Sum_probs=43.8

Q ss_pred             CcccccccccccCChHHHHHHHHHhCC---------------------------------CCCcccccccccccCchHHH
Q psy6676          27 KPFKCTECGKGFCQSRTLAVHKILHLE---------------------------------ESPHKCPVCSRSFNQRSNLK   73 (144)
Q Consensus        27 ~~~~C~~C~~~f~~~~~l~~h~~~~~~---------------------------------~~~~~C~~C~~~~~~~~~l~   73 (144)
                      .-|.|+.|++.|....+|..|.+.|.-                                 ..-|.|..|++.|.....|.
T Consensus       294 vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~rsg~dss~gi~~C~~C~KkFrRqAYLr  373 (500)
T KOG3993|consen  294 VEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAERSGDDSSSGIFSCHTCGKKFRRQAYLR  373 (500)
T ss_pred             eeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhccccCCcccCceeecHHhhhhhHHHHHHH
Confidence            458999999999999999999887731                                 12388999999999999999


Q ss_pred             HHHhhc
Q psy6676          74 THLLTH   79 (144)
Q Consensus        74 ~h~~~h   79 (144)
                      .|+-.|
T Consensus       374 KHqlth  379 (500)
T KOG3993|consen  374 KHQLTH  379 (500)
T ss_pred             HhHHhh
Confidence            996554

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.94  E-value=5.3e-06  Score=35.95  Aligned_cols=24  Identities=46%  Similarity=1.034  Sum_probs=18.5

Q ss_pred             cccCcchhhhcChHHHHHhHhhcc
Q psy6676          85 YNCAACGKVFRRNCDLRRHSLTHN  108 (144)
Q Consensus        85 ~~C~~C~~~f~~~~~l~~H~~~h~  108 (144)
                      |.|..|++.|.+...|..|++++|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            578889999999999999888765

...

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.93  E-value=2.3e-06  Score=59.97  Aligned_cols=71  Identities=27%  Similarity=0.527  Sum_probs=41.4

Q ss_pred             CCcccccc--cccccCChHHHHHHHHHhC-CCCCcccccccccccCchHHHHHHhhcCCCCCcccCcchhhhcChHHHHH
Q psy6676          26 EKPFKCTE--CGKGFCQSRTLAVHKILHL-EESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCDLRR  102 (144)
Q Consensus        26 ~~~~~C~~--C~~~f~~~~~l~~h~~~~~-~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~  102 (144)
                      .|||+|++  |.+.|+....|+-|+.--+ ..+...-+         . -..+.-.-...+||+|++|+|.|+....|+-
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p---------~-p~~~~~F~~~~KPYrCevC~KRYKNlNGLKY  416 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENP---------S-PEKMNIFSAKDKPYRCEVCDKRYKNLNGLKY  416 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCC---------C-ccccccccccCCceeccccchhhccCcccee
Confidence            36777765  7777777777776643221 11110000         0 0001111234589999999999999999998


Q ss_pred             hHhh
Q psy6676         103 HSLT  106 (144)
Q Consensus       103 H~~~  106 (144)
                      |+.-
T Consensus       417 Hr~H  420 (423)
T COG5189         417 HRKH  420 (423)
T ss_pred             cccc
Confidence            8753

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.88  E-value=2.8e-05  Score=41.06  Aligned_cols=50  Identities=26%  Similarity=0.440  Sum_probs=39.3

Q ss_pred             CcccccccccccCchHHHHHHh-hcCCC-CCcccCcchhhhcChHHHHHhHhhcc
Q psy6676          56 PHKCPVCSRSFNQRSNLKTHLL-THTDI-KPYNCAACGKVFRRNCDLRRHSLTHN  108 (144)
Q Consensus        56 ~~~C~~C~~~~~~~~~l~~h~~-~h~~~-~~~~C~~C~~~f~~~~~l~~H~~~h~  108 (144)
                      .|.|+.|++ ......|..|.. .|..+ +.+.|++|...+.  .+|..|+..+|
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            489999999 556688999976 45543 5699999998655  48999998776

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.84  E-value=8.2e-06  Score=36.65  Aligned_cols=26  Identities=38%  Similarity=0.847  Sum_probs=20.4

Q ss_pred             CcccCcchhhhcChHHHHHhHhhccC
Q psy6676          84 PYNCAACGKVFRRNCDLRRHSLTHNL  109 (144)
Q Consensus        84 ~~~C~~C~~~f~~~~~l~~H~~~h~~  109 (144)
                      +|.|..|++.|.+...|..|++.|+.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhcC
Confidence            47788888888888888888877653

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.79  E-value=1.8e-05  Score=34.05  Aligned_cols=22  Identities=36%  Similarity=0.730  Sum_probs=15.3

Q ss_pred             ccccccccccCChHHHHHHHHH
Q psy6676          29 FKCTECGKGFCQSRTLAVHKIL   50 (144)
Q Consensus        29 ~~C~~C~~~f~~~~~l~~h~~~   50 (144)
                      |.|+.|++.|.....|..|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            4677777777777777777654

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.61  E-value=4.9e-05  Score=44.96  Aligned_cols=74  Identities=20%  Similarity=0.347  Sum_probs=22.4

Q ss_pred             cccccccccCChHHHHHHHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcchhhhcChHHHHHhHhhcc
Q psy6676          30 KCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTHN  108 (144)
Q Consensus        30 ~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  108 (144)
                      +|..|+..|.....+..|+...++-..   .. ...+.....+..+.+.. ....+.|..|++.|.+...|..|++.+.
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~---~~-~~~l~~~~~~~~~~~~~-~~~~~~C~~C~~~f~s~~~l~~Hm~~~~   74 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDI---PD-QKYLVDPNRLLNYLRKK-VKESFRCPYCNKTFRSREALQEHMRSKH   74 (100)
T ss_dssp             -----------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHTT
T ss_pred             Ccccccccccccccccccccccccccc---cc-ccccccccccccccccc-cCCCCCCCccCCCCcCHHHHHHHHcCcc
Confidence            489999999999999999876554321   11 11111223333333322 2236999999999999999999998754

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.57  E-value=7.3e-05  Score=32.17  Aligned_cols=23  Identities=39%  Similarity=0.764  Sum_probs=15.6

Q ss_pred             ccccccccccCChHHHHHHHHHh
Q psy6676          29 FKCTECGKGFCQSRTLAVHKILH   51 (144)
Q Consensus        29 ~~C~~C~~~f~~~~~l~~h~~~~   51 (144)
                      |.|++|++.|.+...|..|+..+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            56777888887777777777655

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.39  E-value=0.0001  Score=32.94  Aligned_cols=24  Identities=50%  Similarity=0.956  Sum_probs=15.1

Q ss_pred             cccccccccccCChHHHHHHHHHh
Q psy6676          28 PFKCTECGKGFCQSRTLAVHKILH   51 (144)
Q Consensus        28 ~~~C~~C~~~f~~~~~l~~h~~~~   51 (144)
                      +|.|..|++.|.+...|..|++.|
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h   24 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSH   24 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHh
Confidence            456666666666666666666554

>smart00355 ZnF_C2H2 zinc finger

Probab=97.39  E-value=0.00018  Score=31.36  Aligned_cols=24  Identities=46%  Similarity=1.005  Sum_probs=18.9

Q ss_pred             cccCcchhhhcChHHHHHhHhhcc
Q psy6676          85 YNCAACGKVFRRNCDLRRHSLTHN  108 (144)
Q Consensus        85 ~~C~~C~~~f~~~~~l~~H~~~h~  108 (144)
                      |.|..|++.|.....|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            568888888888888888887554

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.96  E-value=0.00081  Score=34.47  Aligned_cols=32  Identities=31%  Similarity=0.647  Sum_probs=19.6

Q ss_pred             CCCCCcccCcchhhhcChHHHHHhHhhccCCC
Q psy6676          80 TDIKPYNCAACGKVFRRNCDLRRHSLTHNLGS  111 (144)
Q Consensus        80 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  111 (144)
                      ..+.|..|++|+..+....+|++|+.+.|...
T Consensus        20 ~S~~PatCP~C~a~~~~srnLrRHle~~H~~k   51 (54)
T PF09237_consen   20 QSEQPATCPICGAVIRQSRNLRRHLEIRHFKK   51 (54)
T ss_dssp             TTS--EE-TTT--EESSHHHHHHHHHHHTTTS
T ss_pred             ccCCCCCCCcchhhccchhhHHHHHHHHhccc
Confidence            34567788888888888888888887766543

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.82  E-value=0.00054  Score=29.89  Aligned_cols=22  Identities=32%  Similarity=0.724  Sum_probs=17.0

Q ss_pred             cccCcchhhhcChHHHHHhHhh
Q psy6676          85 YNCAACGKVFRRNCDLRRHSLT  106 (144)
Q Consensus        85 ~~C~~C~~~f~~~~~l~~H~~~  106 (144)
                      |.|.+|++.|.+...+..|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            5678888888888888888764

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.82  E-value=0.0017  Score=33.27  Aligned_cols=30  Identities=33%  Similarity=0.492  Sum_probs=14.3

Q ss_pred             CCcccccccccccCChHHHHHHHHHhCCCC
Q psy6676          26 EKPFKCTECGKGFCQSRTLAVHKILHLEES   55 (144)
Q Consensus        26 ~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~   55 (144)
                      ..|..|++|+..+.+..+|.+|+...++.+
T Consensus        22 ~~PatCP~C~a~~~~srnLrRHle~~H~~k   51 (54)
T PF09237_consen   22 EQPATCPICGAVIRQSRNLRRHLEIRHFKK   51 (54)
T ss_dssp             S--EE-TTT--EESSHHHHHHHHHHHTTTS
T ss_pred             CCCCCCCcchhhccchhhHHHHHHHHhccc
Confidence            455566666666666666666655554443

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>smart00355 ZnF_C2H2 zinc finger

Probab=96.78  E-value=0.0017  Score=28.09  Aligned_cols=23  Identities=39%  Similarity=0.790  Sum_probs=15.2

Q ss_pred             ccccccccccCChHHHHHHHHHh
Q psy6676          29 FKCTECGKGFCQSRTLAVHKILH   51 (144)
Q Consensus        29 ~~C~~C~~~f~~~~~l~~h~~~~   51 (144)
                      |.|..|++.|.....+..|+..|
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHh
Confidence            45667777777777777776644

>PRK04860 hypothetical protein; Provisional

Probab=96.72  E-value=0.00093  Score=43.25  Aligned_cols=38  Identities=21%  Similarity=0.576  Sum_probs=31.3

Q ss_pred             CcccccccccccCchHHHHHHhhcCCCCCcccCcchhhhcCh
Q psy6676          56 PHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRN   97 (144)
Q Consensus        56 ~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~   97 (144)
                      +|.|. |+.   ....+..|.+.++++++|.|..|+..|...
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~  156 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFK  156 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEe
Confidence            48887 876   566788999999999999999999887654

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.71  E-value=0.00089  Score=28.93  Aligned_cols=23  Identities=30%  Similarity=0.715  Sum_probs=16.6

Q ss_pred             cccCcchhhhcChHHHHHhHhhcc
Q psy6676          85 YNCAACGKVFRRNCDLRRHSLTHN  108 (144)
Q Consensus        85 ~~C~~C~~~f~~~~~l~~H~~~h~  108 (144)
                      |+|..|..... ...|..|++.+|
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            57888887777 778888888765

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.50  E-value=0.00091  Score=29.85  Aligned_cols=22  Identities=32%  Similarity=0.755  Sum_probs=18.1

Q ss_pred             cccCcchhhhcChHHHHHhHhh
Q psy6676          85 YNCAACGKVFRRNCDLRRHSLT  106 (144)
Q Consensus        85 ~~C~~C~~~f~~~~~l~~H~~~  106 (144)
                      |.|..|++.|.+...+..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            6788888888888888888764

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.42  E-value=0.0021  Score=27.98  Aligned_cols=22  Identities=32%  Similarity=0.603  Sum_probs=13.9

Q ss_pred             ccccccccccCChHHHHHHHHH
Q psy6676          29 FKCTECGKGFCQSRTLAVHKIL   50 (144)
Q Consensus        29 ~~C~~C~~~f~~~~~l~~h~~~   50 (144)
                      |.|.+|+..|.+...|..|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            4566666666666666666543

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.20  E-value=0.0041  Score=26.78  Aligned_cols=23  Identities=26%  Similarity=0.495  Sum_probs=15.2

Q ss_pred             ccccccccccCChHHHHHHHHHhC
Q psy6676          29 FKCTECGKGFCQSRTLAVHKILHL   52 (144)
Q Consensus        29 ~~C~~C~~~f~~~~~l~~h~~~~~   52 (144)
                      |.|+.|..... ...|..|+..++
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            56788887776 777888876653

>PRK04860 hypothetical protein; Provisional

Probab=95.94  E-value=0.0055  Score=39.72  Aligned_cols=39  Identities=21%  Similarity=0.541  Sum_probs=33.0

Q ss_pred             CcccccccccccCChHHHHHHHHHhCCCCCcccccccccccCc
Q psy6676          27 KPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQR   69 (144)
Q Consensus        27 ~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~   69 (144)
                      -+|.|. |+.   ....+..|.+.+.+.++|.|..|+..|...
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~  156 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFK  156 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEe
Confidence            368998 987   566789999999999999999999887543

>KOG4173|consensus

Probab=95.83  E-value=0.0063  Score=40.57  Aligned_cols=80  Identities=24%  Similarity=0.501  Sum_probs=63.0

Q ss_pred             CCCcccccc--cccccCChHHHHHHHHHhCCCCCcccccccccccCchHHHHHHhh-c---------CCCCCcccC--cc
Q psy6676          25 KEKPFKCTE--CGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLT-H---------TDIKPYNCA--AC   90 (144)
Q Consensus        25 ~~~~~~C~~--C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~-h---------~~~~~~~C~--~C   90 (144)
                      +...+.|++  |-+.|...-++..|..+.++   ..|.+|.+.|...-.|..|+-. |         .|.-.|.|.  .|
T Consensus        76 ~~~~~~cqvagc~~~~d~lD~~E~hY~~~h~---~sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgC  152 (253)
T KOG4173|consen   76 RVPAFACQVAGCCQVFDALDDYEHHYHTLHG---NSCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGC  152 (253)
T ss_pred             ccccccccccchHHHHhhhhhHHHhhhhccc---chhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhh
Confidence            445578887  77888888888998766655   4899999999999888888753 3         345568995  59


Q ss_pred             hhhhcChHHHHHhHhhc
Q psy6676          91 GKVFRRNCDLRRHSLTH  107 (144)
Q Consensus        91 ~~~f~~~~~l~~H~~~h  107 (144)
                      +..|.+....+.|+-.-
T Consensus       153 t~KFkT~r~RkdH~I~~  169 (253)
T KOG4173|consen  153 TEKFKTSRDRKDHMIRM  169 (253)
T ss_pred             hhhhhhhhhhhhHHHHh
Confidence            99999999999998543

>KOG1146|consensus

Probab=95.66  E-value=0.0056  Score=50.84  Aligned_cols=83  Identities=27%  Similarity=0.378  Sum_probs=52.9

Q ss_pred             ccccCCCCcccccccccccCChHHHHHHHHHhCCC-CCcccccccccccCchHHHHHHhhcCCCCCcccCcchhhhcChH
Q psy6676          20 GYIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEE-SPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNC   98 (144)
Q Consensus        20 ~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~-~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~   98 (144)
                      ..+++..+.++|++|++.|+....|..|++..+.+ ..   .+|. .+...-.+..-...-.+.++|.|..|...++...
T Consensus       457 ~~L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~---~~c~-~gq~~~~~arg~~~~~~~~p~~C~~C~~stttng  532 (1406)
T KOG1146|consen  457 VVLHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQS---AYCK-AGQNHPRLARGEVYRCPGKPYPCRACNYSTTTNG  532 (1406)
T ss_pred             eeeecccccccCCccchhhhhHHHhhhcccccccccch---hHhH-hccccccccccccccCCCCcccceeeeeeeecch
Confidence            35567778899999999999999999998874322 21   2221 1111000000011223457899999999999999


Q ss_pred             HHHHhHhh
Q psy6676          99 DLRRHSLT  106 (144)
Q Consensus        99 ~l~~H~~~  106 (144)
                      .|.+|+..
T Consensus       533 ~LsihlqS  540 (1406)
T KOG1146|consen  533 NLSIHLQS  540 (1406)
T ss_pred             HHHHHHHH
Confidence            99999864

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.61  E-value=0.0031  Score=28.09  Aligned_cols=20  Identities=35%  Similarity=0.695  Sum_probs=11.2

Q ss_pred             ccccccccccCChHHHHHHH
Q psy6676          29 FKCTECGKGFCQSRTLAVHK   48 (144)
Q Consensus        29 ~~C~~C~~~f~~~~~l~~h~   48 (144)
                      |.|..|++.|.+...+..|+
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~   21 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHM   21 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCT
T ss_pred             CCcccCCCCcCCHHHHHHHH
Confidence            45555665665555555554

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=95.46  E-value=0.013  Score=25.66  Aligned_cols=21  Identities=29%  Similarity=0.660  Sum_probs=13.3

Q ss_pred             cccCcchhhhcChHHHHHhHhh
Q psy6676          85 YNCAACGKVFRRNCDLRRHSLT  106 (144)
Q Consensus        85 ~~C~~C~~~f~~~~~l~~H~~~  106 (144)
                      ..|+.||+.| ....|.+|+++
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            3567777777 45566666654

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=94.77  E-value=0.015  Score=30.33  Aligned_cols=33  Identities=18%  Similarity=0.278  Sum_probs=27.8

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCC
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLE   53 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~   53 (144)
                      ....|+.-+.|+.|+..|....++.+|++.-++
T Consensus        10 ~~RDGE~~lrCPRC~~~FR~~K~Y~RHVNKaH~   42 (65)
T COG4049          10 RDRDGEEFLRCPRCGMVFRRRKDYIRHVNKAHG   42 (65)
T ss_pred             eccCCceeeeCCchhHHHHHhHHHHHHhhHHhh
Confidence            446788889999999999999999999876554

>KOG1146|consensus

Probab=93.90  E-value=0.026  Score=47.17  Aligned_cols=80  Identities=16%  Similarity=0.225  Sum_probs=55.2

Q ss_pred             ccccccccccCChHHHHHHHHHhCCCCCcccccccccccCchHHHHHHhhc-----------------CCCCCcccCcch
Q psy6676          29 FKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTH-----------------TDIKPYNCAACG   91 (144)
Q Consensus        29 ~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h-----------------~~~~~~~C~~C~   91 (144)
                      +.|..|.+.+...-.+. ++   ....+|.|..|...|.....+..|.+.-                 ....+| |..|.
T Consensus      1261 ~~c~~~~~~~~~~~~~~-~l---~~~~~~~~~~~~~~~~~~~~l~~~~~k~~~~~~~~~~~~~~~l~~~d~~~~-c~~c~ 1335 (1406)
T KOG1146|consen 1261 GECGAVDELLTPSFGIS-TL---DVTHRYLCRQCKMAFDGEAPLTAHQRKFCFAGRGSGGSMPPPLRVPDCTYH-CLACE 1335 (1406)
T ss_pred             chhhhccccccCcccee-ec---ccchhHHHHHHHhhhcchhHHHHHHHHHHhccCccccCCCCcccCcccccc-chHHH
Confidence            66878887776655555 32   2234578888888888888887777422                 122335 99999


Q ss_pred             hhhcChHHHHHhHhh-ccCCCCC
Q psy6676          92 KVFRRNCDLRRHSLT-HNLGSAT  113 (144)
Q Consensus        92 ~~f~~~~~l~~H~~~-h~~~~~~  113 (144)
                      ..|+....|++|+++ ++.....
T Consensus      1336 ~~~~~~~alqihm~~~~~~~kt~ 1358 (1406)
T KOG1146|consen 1336 VLLSGREALQIHMRSSAHRRKTA 1358 (1406)
T ss_pred             hhcchhHHHHHHHHHhhhcccCC
Confidence            999999999999986 4433333

>smart00451 ZnF_U1 U1-like zinc finger

Probab=93.90  E-value=0.04  Score=25.82  Aligned_cols=23  Identities=17%  Similarity=0.455  Sum_probs=18.7

Q ss_pred             CcccCcchhhhcChHHHHHhHhh
Q psy6676          84 PYNCAACGKVFRRNCDLRRHSLT  106 (144)
Q Consensus        84 ~~~C~~C~~~f~~~~~l~~H~~~  106 (144)
                      +|.|..|++.|.....+..|++.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            57888899988888888888753

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>smart00451 ZnF_U1 U1-like zinc finger

Probab=93.55  E-value=0.074  Score=24.85  Aligned_cols=22  Identities=23%  Similarity=0.480  Sum_probs=14.2

Q ss_pred             cccccccccccCChHHHHHHHH
Q psy6676          28 PFKCTECGKGFCQSRTLAVHKI   49 (144)
Q Consensus        28 ~~~C~~C~~~f~~~~~l~~h~~   49 (144)
                      +|.|.+|+..|.....+..|+.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHC
Confidence            4667777777766666666643

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=93.22  E-value=0.053  Score=25.33  Aligned_cols=9  Identities=44%  Similarity=1.446  Sum_probs=4.3

Q ss_pred             CCcccCcch
Q psy6676          83 KPYNCAACG   91 (144)
Q Consensus        83 ~~~~C~~C~   91 (144)
                      .++.|+.|+
T Consensus        16 ~~~~CP~Cg   24 (33)
T cd00350          16 APWVCPVCG   24 (33)
T ss_pred             CCCcCcCCC
Confidence            344555554

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=93.08  E-value=0.059  Score=28.18  Aligned_cols=30  Identities=33%  Similarity=0.561  Sum_probs=23.4

Q ss_pred             cCCCCCcccCcchhhhcChHHHHHhHhhcc
Q psy6676          79 HTDIKPYNCAACGKVFRRNCDLRRHSLTHN  108 (144)
Q Consensus        79 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  108 (144)
                      -.|+.-+.|+-|+..|.+...+.+|...-|
T Consensus        12 RDGE~~lrCPRC~~~FR~~K~Y~RHVNKaH   41 (65)
T COG4049          12 RDGEEFLRCPRCGMVFRRRKDYIRHVNKAH   41 (65)
T ss_pred             cCCceeeeCCchhHHHHHhHHHHHHhhHHh
Confidence            356677889999999999888888885433

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=93.07  E-value=0.065  Score=38.75  Aligned_cols=79  Identities=24%  Similarity=0.383  Sum_probs=49.2

Q ss_pred             cccccc--cccccCChHHHHHHHHHhCCCCCcccccccc---cc------cCchHHHHHHhhcCCCCC----cccCcchh
Q psy6676          28 PFKCTE--CGKGFCQSRTLAVHKILHLEESPHKCPVCSR---SF------NQRSNLKTHLLTHTDIKP----YNCAACGK   92 (144)
Q Consensus        28 ~~~C~~--C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~---~~------~~~~~l~~h~~~h~~~~~----~~C~~C~~   92 (144)
                      .|.|+.  |.........|..|.++.++.  +.|..|-.   .|      .....|..|......+..    -.|..|..
T Consensus       151 ~F~CP~skc~~~C~~~k~lk~H~K~~H~~--~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GFKGHP~C~FC~~  228 (493)
T COG5236         151 SFKCPKSKCHRRCGSLKELKKHYKAQHGF--VLCSECIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGFKGHPLCIFCKI  228 (493)
T ss_pred             HhcCCchhhhhhhhhHHHHHHHHHhhcCc--EEhHhhhcCcccCccceeeeecccccccccCCccccCcCCCchhhhccc
Confidence            377875  666666677888888776643  56666652   22      233556666543332222    25788888


Q ss_pred             hhcChHHHHHhHhhcc
Q psy6676          93 VFRRNCDLRRHSLTHN  108 (144)
Q Consensus        93 ~f~~~~~l~~H~~~h~  108 (144)
                      -|.....|.+|.+..|
T Consensus       229 ~FYdDDEL~~HcR~~H  244 (493)
T COG5236         229 YFYDDDELRRHCRLRH  244 (493)
T ss_pred             eecChHHHHHHHHhhh
Confidence            8888888888877543

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=92.63  E-value=0.089  Score=31.82  Aligned_cols=15  Identities=33%  Similarity=0.866  Sum_probs=8.0

Q ss_pred             CCcccCcchhhhcCh
Q psy6676          83 KPYNCAACGKVFRRN   97 (144)
Q Consensus        83 ~~~~C~~C~~~f~~~   97 (144)
                      .|..|+.||..|.-.
T Consensus        25 ~PivCP~CG~~~~~~   39 (108)
T PF09538_consen   25 DPIVCPKCGTEFPPE   39 (108)
T ss_pred             CCccCCCCCCccCcc
Confidence            445555565555444

The function of members of this family is unknown.

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=91.72  E-value=0.14  Score=31.01  Aligned_cols=30  Identities=30%  Similarity=0.805  Sum_probs=23.8

Q ss_pred             ccccccccccCChHHHHHHHHHhCCCCCcccccccccccCc
Q psy6676          29 FKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQR   69 (144)
Q Consensus        29 ~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~   69 (144)
                      ..|+.||..|-..           +..|.+|+.||..|...
T Consensus        10 R~Cp~CG~kFYDL-----------nk~PivCP~CG~~~~~~   39 (108)
T PF09538_consen   10 RTCPSCGAKFYDL-----------NKDPIVCPKCGTEFPPE   39 (108)
T ss_pred             ccCCCCcchhccC-----------CCCCccCCCCCCccCcc
Confidence            4799999998543           24688999999988665

The function of members of this family is unknown.

>KOG2482|consensus

Probab=91.11  E-value=0.26  Score=35.72  Aligned_cols=79  Identities=24%  Similarity=0.380  Sum_probs=57.9

Q ss_pred             cccccccccccCChHHHHHHHHHhCCC-----------------------------------------------------
Q psy6676          28 PFKCTECGKGFCQSRTLAVHKILHLEE-----------------------------------------------------   54 (144)
Q Consensus        28 ~~~C~~C~~~f~~~~~l~~h~~~~~~~-----------------------------------------------------   54 (144)
                      .+.|-.|.+.|+.+..|..||+.....                                                     
T Consensus       195 r~~CLyCekifrdkntLkeHMrkK~HrrinPknreYDkfyiINY~ev~ks~t~~~~e~dret~~d~~E~D~~wsDw~ed~  274 (423)
T KOG2482|consen  195 RLRCLYCEKIFRDKNTLKEHMRKKRHRRINPKNREYDKFYIINYLEVGKSWTIVHSEDDRETNEDINETDDTWSDWNEDD  274 (423)
T ss_pred             hheeeeeccccCCcHHHHHHHHhccCcccCCCccccceEEEEeHhhcCCccchhhhhhhhhhhccccccccchhhhhcCC
Confidence            478999999999999999998743210                                                     


Q ss_pred             -CC--cccccccccccCchHHHHHHhh-cCC--------------------------CCCcccCcchhhhcChHHHHHhH
Q psy6676          55 -SP--HKCPVCSRSFNQRSNLKTHLLT-HTD--------------------------IKPYNCAACGKVFRRNCDLRRHS  104 (144)
Q Consensus        55 -~~--~~C~~C~~~~~~~~~l~~h~~~-h~~--------------------------~~~~~C~~C~~~f~~~~~l~~H~  104 (144)
                       .+  .+|..|...+.+...|..||+. |.-                          .....|-.|.-.|.....|..|+
T Consensus       275 a~a~~v~CLfC~~~~en~~~l~eHmk~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~hm  354 (423)
T KOG2482|consen  275 AEALSVVCLFCTNFYENPVFLFEHMKIVHEFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGLLIHM  354 (423)
T ss_pred             CCccceEEEeeccchhhHHHHHHHHHHHHHhhHHhhccccccchhhhhhHHHHHHHHhhccccccccccccCcchhhhhc
Confidence             01  3688888888888888888874 321                          11246778888899999999888


Q ss_pred             hh
Q psy6676         105 LT  106 (144)
Q Consensus       105 ~~  106 (144)
                      .-
T Consensus       355 ~e  356 (423)
T KOG2482|consen  355 VE  356 (423)
T ss_pred             cc
Confidence            53

>COG1592 Rubrerythrin [Energy production and conversion]

Probab=91.03  E-value=0.13  Score=33.47  Aligned_cols=24  Identities=33%  Similarity=0.805  Sum_probs=18.9

Q ss_pred             CcccccccccccCchHHHHHHhhcCCCCCcccCcchh
Q psy6676          56 PHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGK   92 (144)
Q Consensus        56 ~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~   92 (144)
                      .|+|.+||..+             .++.|.+|++||.
T Consensus       134 ~~vC~vCGy~~-------------~ge~P~~CPiCga  157 (166)
T COG1592         134 VWVCPVCGYTH-------------EGEAPEVCPICGA  157 (166)
T ss_pred             EEEcCCCCCcc-------------cCCCCCcCCCCCC
Confidence            69999998663             4478889999983

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=90.51  E-value=0.33  Score=28.23  Aligned_cols=24  Identities=29%  Similarity=0.886  Sum_probs=17.1

Q ss_pred             CcccccccccccCchHHHHHHhhc
Q psy6676          56 PHKCPVCSRSFNQRSNLKTHLLTH   79 (144)
Q Consensus        56 ~~~C~~C~~~~~~~~~l~~h~~~h   79 (144)
                      .+.|..|++.|.+...|..|++.+
T Consensus        50 ~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen   50 SFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             SEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             CCCCCccCCCCcCHHHHHHHHcCc
Confidence            577777777777777777777653

>KOG2231|consensus

Probab=90.33  E-value=0.42  Score=37.81  Aligned_cols=81  Identities=23%  Similarity=0.399  Sum_probs=49.1

Q ss_pred             cccccccccc---------------CChHHHHHHHHHhCCCCCccccccc----------ccccCchHHHHHHhhc-CCC
Q psy6676          29 FKCTECGKGF---------------CQSRTLAVHKILHLEESPHKCPVCS----------RSFNQRSNLKTHLLTH-TDI   82 (144)
Q Consensus        29 ~~C~~C~~~f---------------~~~~~l~~h~~~~~~~~~~~C~~C~----------~~~~~~~~l~~h~~~h-~~~   82 (144)
                      +.|.+|.+.|               .....|+.|+...++  .+.|..|.          +.|. ...|..|++.. .++
T Consensus       100 ~~C~~C~~~~~~~~~~~~~~~c~~~~s~~~Lk~H~~~~H~--~~~c~lC~~~~kif~~e~k~Yt-~~el~~h~~~gd~d~  176 (669)
T KOG2231|consen  100 HSCHICDRRFRALYNKKECLHCTEFKSVENLKNHMRDQHK--LHLCSLCLQNLKIFINERKLYT-RAELNLHLMFGDPDD  176 (669)
T ss_pred             hhcCccccchhhhcccCCCccccchhHHHHHHHHHHHhhh--hhccccccccceeeeeeeeheh-HHHHHHHHhcCCCcc
Confidence            4566666666               367788999865443  23444433          2332 34566666532 222


Q ss_pred             CC----cccCcchhhhcChHHHHHhHhhccCCCC
Q psy6676          83 KP----YNCAACGKVFRRNCDLRRHSLTHNLGSA  112 (144)
Q Consensus        83 ~~----~~C~~C~~~f~~~~~l~~H~~~h~~~~~  112 (144)
                      +.    -.|+.|...|.....|.+|++..|..--
T Consensus       177 ~s~rGhp~C~~C~~~fld~~el~rH~~~~h~~ch  210 (669)
T KOG2231|consen  177 ESCRGHPLCKFCHERFLDDDELYRHLRFDHEFCH  210 (669)
T ss_pred             ccccCCccchhhhhhhccHHHHHHhhccceehee
Confidence            22    3678888888888888888887654433

>KOG2893|consensus

Probab=89.77  E-value=0.095  Score=35.97  Aligned_cols=28  Identities=25%  Similarity=0.644  Sum_probs=13.5

Q ss_pred             ccccccCChHHHHHHHHHhCCCCCcccccccc
Q psy6676          33 ECGKGFCQSRTLAVHKILHLEESPHKCPVCSR   64 (144)
Q Consensus        33 ~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~   64 (144)
                      +|++.|..+.-|-+|++..    .|+|.+|.+
T Consensus        15 ycnrefddekiliqhqkak----hfkchichk   42 (341)
T KOG2893|consen   15 YCNREFDDEKILIQHQKAK----HFKCHICHK   42 (341)
T ss_pred             ecccccchhhhhhhhhhhc----cceeeeehh
Confidence            4555555555444443332    245555543

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=89.70  E-value=0.087  Score=38.80  Aligned_cols=60  Identities=37%  Similarity=0.712  Sum_probs=30.4

Q ss_pred             cccccccccccCChHHHHHHHH--HhCCC--CCcccc--cccccccCchHHHHHHhhcCCCCCccc
Q psy6676          28 PFKCTECGKGFCQSRTLAVHKI--LHLEE--SPHKCP--VCSRSFNQRSNLKTHLLTHTDIKPYNC   87 (144)
Q Consensus        28 ~~~C~~C~~~f~~~~~l~~h~~--~~~~~--~~~~C~--~C~~~~~~~~~l~~h~~~h~~~~~~~C   87 (144)
                      ++.|..|...|.....+..|..  .|.+.  +++.|.  .|++.|.....+..|...|.+..++.+
T Consensus       289 ~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  354 (467)
T COG5048         289 PIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKE  354 (467)
T ss_pred             CCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCcccc
Confidence            4455555555555555555555  44444  455555  455555555555555555544444433

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=88.93  E-value=0.75  Score=27.70  Aligned_cols=26  Identities=27%  Similarity=0.576  Sum_probs=23.1

Q ss_pred             Cccc----CcchhhhcChHHHHHhHhhccC
Q psy6676          84 PYNC----AACGKVFRRNCDLRRHSLTHNL  109 (144)
Q Consensus        84 ~~~C----~~C~~~f~~~~~l~~H~~~h~~  109 (144)
                      .|.|    ..|++...+...++.|.+.+|.
T Consensus        80 G~~C~~~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   80 GYRCQCDPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             CeeeecCCCCCCcEeccHHHHHHHHHHhcC
Confidence            3899    9999999999999999988763

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>COG1592 Rubrerythrin [Energy production and conversion]

Probab=88.66  E-value=0.27  Score=32.08  Aligned_cols=24  Identities=38%  Similarity=0.994  Sum_probs=19.7

Q ss_pred             cccccccccccCChHHHHHHHHHhCCCCCcccccccc
Q psy6676          28 PFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSR   64 (144)
Q Consensus        28 ~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~   64 (144)
                      -|.|++||..             +.+..|.+|++|+-
T Consensus       134 ~~vC~vCGy~-------------~~ge~P~~CPiCga  157 (166)
T COG1592         134 VWVCPVCGYT-------------HEGEAPEVCPICGA  157 (166)
T ss_pred             EEEcCCCCCc-------------ccCCCCCcCCCCCC
Confidence            6999999976             45567899999984

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=88.60  E-value=0.26  Score=23.16  Aligned_cols=10  Identities=40%  Similarity=0.939  Sum_probs=5.1

Q ss_pred             cccccccccc
Q psy6676          57 HKCPVCSRSF   66 (144)
Q Consensus        57 ~~C~~C~~~~   66 (144)
                      |+|.+||..+
T Consensus         3 ~~C~~CG~i~   12 (34)
T cd00729           3 WVCPVCGYIH   12 (34)
T ss_pred             EECCCCCCEe
Confidence            4555555443

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=88.59  E-value=0.12  Score=38.01  Aligned_cols=59  Identities=42%  Similarity=0.723  Sum_probs=52.3

Q ss_pred             CCcccccccccccCchHHHHHHh--hcCCC--CCcccC--cchhhhcChHHHHHhHhhccCCCCC
Q psy6676          55 SPHKCPVCSRSFNQRSNLKTHLL--THTDI--KPYNCA--ACGKVFRRNCDLRRHSLTHNLGSAT  113 (144)
Q Consensus        55 ~~~~C~~C~~~~~~~~~l~~h~~--~h~~~--~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~  113 (144)
                      .++.|..|...|.....+..|.+  .|.++  +++.|.  .|++.|.+...+..|..+|......
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  352 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPA  352 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCcc
Confidence            35788889999999999999999  89999  999999  7999999999999999888766533

>KOG2893|consensus

Probab=88.18  E-value=0.16  Score=34.85  Aligned_cols=42  Identities=29%  Similarity=0.543  Sum_probs=32.5

Q ss_pred             cccccccccCchHHHHHHhhcCCCCCcccCcchhhhcChHHHHHhH
Q psy6676          59 CPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCDLRRHS  104 (144)
Q Consensus        59 C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  104 (144)
                      |=.|++.|.....|.+|++.    +.|+|-+|-|.+-+.-.|..|-
T Consensus        13 cwycnrefddekiliqhqka----khfkchichkkl~sgpglsihc   54 (341)
T KOG2893|consen   13 CWYCNREFDDEKILIQHQKA----KHFKCHICHKKLFSGPGLSIHC   54 (341)
T ss_pred             eeecccccchhhhhhhhhhh----ccceeeeehhhhccCCCceeeh
Confidence            55688999998888888874    5589999988777766666664

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=87.48  E-value=0.55  Score=33.80  Aligned_cols=28  Identities=32%  Similarity=0.699  Sum_probs=24.2

Q ss_pred             CCCcccCc--chhhhcChHHHHHhHhhccC
Q psy6676          82 IKPYNCAA--CGKVFRRNCDLRRHSLTHNL  109 (144)
Q Consensus        82 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~  109 (144)
                      ++||+|++  |.|.|+....|+-|+.-.|.
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~  376 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQ  376 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhcccc
Confidence            58999976  99999999999999876553

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=87.23  E-value=0.078  Score=36.10  Aligned_cols=17  Identities=35%  Similarity=0.854  Sum_probs=12.3

Q ss_pred             CCcccccccccccCChH
Q psy6676          26 EKPFKCTECGKGFCQSR   42 (144)
Q Consensus        26 ~~~~~C~~C~~~f~~~~   42 (144)
                      .+...||+|+..|....
T Consensus         3 ~k~~~CPvC~~~F~~~~   19 (214)
T PF09986_consen    3 DKKITCPVCGKEFKTKK   19 (214)
T ss_pred             CCceECCCCCCeeeeeE
Confidence            35667888888887664

>KOG2482|consensus

Probab=85.92  E-value=0.85  Score=33.17  Aligned_cols=54  Identities=19%  Similarity=0.351  Sum_probs=36.1

Q ss_pred             CCCcccccccccccCCh-HHHHHHHHH-hC---C------------------CCCcccccccccccCchHHHHHHhh
Q psy6676          25 KEKPFKCTECGKGFCQS-RTLAVHKIL-HL---E------------------ESPHKCPVCSRSFNQRSNLKTHLLT   78 (144)
Q Consensus        25 ~~~~~~C~~C~~~f~~~-~~l~~h~~~-~~---~------------------~~~~~C~~C~~~~~~~~~l~~h~~~   78 (144)
                      ......|-.|...+.-. +.+-.|+-. |.   |                  -..+.|..|.+.|.....|..||+.
T Consensus       141 t~fslqClFCn~e~lgnRs~~l~Hlf~~H~lniGlpDniVyvnelLehLkekL~r~~CLyCekifrdkntLkeHMrk  217 (423)
T KOG2482|consen  141 TIFSLQCLFCNNEGLGNRSEILEHLFHVHGLNIGLPDNIVYVNELLEHLKEKLERLRCLYCEKIFRDKNTLKEHMRK  217 (423)
T ss_pred             CeeeeEEEEecchhcccHHHHHHHHHHHhhhccCCCcceeeHHHHHHHHHHHHhhheeeeeccccCCcHHHHHHHHh
Confidence            34556788888776543 334455422 21   1                  1237899999999999999999974

>PF02892 zf-BED: BED zinc finger; InterPro: IPR003656 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=85.78  E-value=0.65  Score=23.00  Aligned_cols=26  Identities=38%  Similarity=0.715  Sum_probs=14.7

Q ss_pred             CCCCcccCcchhhhcCh----HHHHHhHhh
Q psy6676          81 DIKPYNCAACGKVFRRN----CDLRRHSLT  106 (144)
Q Consensus        81 ~~~~~~C~~C~~~f~~~----~~l~~H~~~  106 (144)
                      +....+|..|++.+...    ..|..|++.
T Consensus        13 ~~~~a~C~~C~~~~~~~~~~ts~l~~HL~~   42 (45)
T PF02892_consen   13 DKKKAKCKYCGKVIKYSSGGTSNLKRHLKK   42 (45)
T ss_dssp             CSS-EEETTTTEE-----SSTHHHHHHHHH
T ss_pred             CcCeEEeCCCCeEEeeCCCcHHHHHHhhhh
Confidence            34556788888776653    678888744

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents predicted BED-type zinc finger domains. The BED finger which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain []. Some proteins known to contain a BED domain include animal, plant and fungi AC1 and Hobo-like transposases; Caenorhabditis elegans Dpy-20 protein, a predicted cuticular gene transcriptional regulator; Drosophila BEAF (boundary element-associated factor), thought to be involved in chromatin insulation; Drosophila DREF, a transcriptional regulator for S-phase genes; and tobacco 3AF1 and tomato E4/E8-BP1, light- and ethylene-regulated DNA binding proteins that contain two BED fingers. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003677 DNA binding; PDB: 2DJR_A 2CT5_A.

>TIGR00622 ssl1 transcription factor ssl1

Probab=85.59  E-value=1.3  Score=27.01  Aligned_cols=82  Identities=26%  Similarity=0.394  Sum_probs=49.1

Q ss_pred             CcccccccccccCChHHHHHHHHHhCCCCC------------cccccccccccCchHHHHHHhhcCCCCCcccCcchhhh
Q psy6676          27 KPFKCTECGKGFCQSRTLAVHKILHLEESP------------HKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVF   94 (144)
Q Consensus        27 ~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~------------~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f   94 (144)
                      -|-.|+.|+-.......|.+...-.-.-++            ..|-.|...|........-  .-.....|.|..|...|
T Consensus        14 LP~~CpiCgLtLVss~HLARSyHHLfPl~~f~ev~~~~~~~~~~C~~C~~~f~~~~~~~~~--~~~~~~~y~C~~C~~~F   91 (112)
T TIGR00622        14 LPVECPICGLTLILSTHLARSYHHLFPLKAFQEIPLEEYNGSRFCFGCQGPFPKPPVSPFD--ELKDSHRYVCAVCKNVF   91 (112)
T ss_pred             CCCcCCcCCCEEeccchHHHhhhccCCCcccccccccccCCCCcccCcCCCCCCccccccc--ccccccceeCCCCCCcc
Confidence            567899999887777777654211000111            1377777777553211100  01223468999999999


Q ss_pred             cChHHHHHhHhhccCC
Q psy6676          95 RRNCDLRRHSLTHNLG  110 (144)
Q Consensus        95 ~~~~~l~~H~~~h~~~  110 (144)
                      =..=..-.|...|.-.
T Consensus        92 C~dCD~fiHe~Lh~CP  107 (112)
T TIGR00622        92 CVDCDVFVHESLHCCP  107 (112)
T ss_pred             ccccchhhhhhccCCc
Confidence            8777777787777643

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>TIGR02300 FYDLN_acid conserved hypothetical protein TIGR02300

Probab=84.90  E-value=0.56  Score=29.07  Aligned_cols=14  Identities=21%  Similarity=0.427  Sum_probs=6.6

Q ss_pred             CCcccccccccccC
Q psy6676          55 SPHKCPVCSRSFNQ   68 (144)
Q Consensus        55 ~~~~C~~C~~~~~~   68 (144)
                      .|.+|+.||..|..
T Consensus        25 ~p~vcP~cg~~~~~   38 (129)
T TIGR02300        25 RPAVSPYTGEQFPP   38 (129)
T ss_pred             CCccCCCcCCccCc
Confidence            34455555544433

Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues. The function of members of this family is unknown.

>KOG2186|consensus

Probab=84.62  E-value=0.63  Score=32.32  Aligned_cols=47  Identities=21%  Similarity=0.493  Sum_probs=33.4

Q ss_pred             ccccccccccCChHHHHHHHHHhCCCCCcccccccccccCchHHHHHHhh
Q psy6676          29 FKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLT   78 (144)
Q Consensus        29 ~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~   78 (144)
                      |.|..||....-. .+..|+..-++ .-|.|..|+..|.. ..+..|..-
T Consensus         4 FtCnvCgEsvKKp-~vekH~srCrn-~~fSCIDC~k~F~~-~sYknH~kC   50 (276)
T KOG2186|consen    4 FTCNVCGESVKKP-QVEKHMSRCRN-AYFSCIDCGKTFER-VSYKNHTKC   50 (276)
T ss_pred             Eehhhhhhhcccc-chHHHHHhccC-CeeEEeeccccccc-chhhhhhhh
Confidence            6788888776554 46668777766 55888888888877 556666653

>PF05443 ROS_MUCR: ROS/MUCR transcriptional regulator protein; InterPro: IPR008807 This family consists of several ROS/MUCR transcriptional regulator proteins

Probab=83.01  E-value=0.63  Score=29.22  Aligned_cols=25  Identities=36%  Similarity=0.538  Sum_probs=16.0

Q ss_pred             CCcccCcchhhhcChHHHHHhHhhccCC
Q psy6676          83 KPYNCAACGKVFRRNCDLRRHSLTHNLG  110 (144)
Q Consensus        83 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  110 (144)
                      ....|..||+.|...   ++|++.||+-
T Consensus        71 d~i~clecGk~~k~L---krHL~~~~gl   95 (132)
T PF05443_consen   71 DYIICLECGKKFKTL---KRHLRTHHGL   95 (132)
T ss_dssp             S-EE-TBT--EESBH---HHHHHHTT-S
T ss_pred             CeeEEccCCcccchH---HHHHHHccCC
Confidence            346899999988765   8999998654

The ros chromosomal gene is present in octopine and nopaline strains of Agrobacterium tumefaciens as well as in Rhizobium meliloti (Sinorhizobium meliloti). This gene encodes a 15.5 kDa protein that specifically represses the virC and virD operons in the virulence region of the Ti plasmid [] and is necessary for succinoglycan production []. S. meliloti can produce two types of acidic exopolysaccharides, succinoglycan and galactoglucan, that are interchangeable for infection of Medicago sativa (Alfalfa) nodules. MucR from S. meliloti acts as a transcriptional repressor that blocks the expression of the exp genes responsible for galactoglucan production therefore allowing the exclusive production of succinoglycan [].; GO: 0003677 DNA binding, 0008270 zinc ion binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2JSP_A.

>KOG2231|consensus

Probab=82.92  E-value=1.7  Score=34.55  Aligned_cols=69  Identities=22%  Similarity=0.411  Sum_probs=44.5

Q ss_pred             ccccccccccCChHHHHHHHHHhCCCCCccccccc------ccccCchHHHHHHhhcCCCCCcccC--cch-hhhcChHH
Q psy6676          29 FKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCS------RSFNQRSNLKTHLLTHTDIKPYNCA--ACG-KVFRRNCD   99 (144)
Q Consensus        29 ~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~------~~~~~~~~l~~h~~~h~~~~~~~C~--~C~-~~f~~~~~   99 (144)
                      -.|..|...|.....+..|++.++    |.|..|.      ..|.....|..|.+.++    |.|.  .|. +.|.....
T Consensus       183 p~C~~C~~~fld~~el~rH~~~~h----~~chfC~~~~~~neyy~~~~dLe~HfR~~H----flCE~~~C~~~~f~~~~~  254 (669)
T KOG2231|consen  183 PLCKFCHERFLDDDELYRHLRFDH----EFCHFCDYKTGQNEYYNDYDDLEEHFRKGH----FLCEEEFCRTKKFYVAFE  254 (669)
T ss_pred             ccchhhhhhhccHHHHHHhhccce----eheeecCcccccchhcccchHHHHHhhhcC----ccccccccccceeeehhH
Confidence            358899999999999998877655    4566653      45666778888887544    5665  453 33444433


Q ss_pred             HHHhHh
Q psy6676         100 LRRHSL  105 (144)
Q Consensus       100 l~~H~~  105 (144)
                      +..+++
T Consensus       255 ~ei~lk  260 (669)
T KOG2231|consen  255 LEIELK  260 (669)
T ss_pred             HHHHHH
Confidence            444444

>KOG2186|consensus

Probab=82.90  E-value=0.94  Score=31.50  Aligned_cols=46  Identities=26%  Similarity=0.697  Sum_probs=31.3

Q ss_pred             cccccccccccCchHHHHHHhhcCCCCCcccCcchhhhcChHHHHHhHh
Q psy6676          57 HKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCDLRRHSL  105 (144)
Q Consensus        57 ~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  105 (144)
                      |.|.+||....-. .+..|+...++ ..|.|..|++.|.. ..+..|..
T Consensus         4 FtCnvCgEsvKKp-~vekH~srCrn-~~fSCIDC~k~F~~-~sYknH~k   49 (276)
T KOG2186|consen    4 FTCNVCGESVKKP-QVEKHMSRCRN-AYFSCIDCGKTFER-VSYKNHTK   49 (276)
T ss_pred             Eehhhhhhhcccc-chHHHHHhccC-CeeEEeeccccccc-chhhhhhh
Confidence            6778887665443 35557766666 56788888888877 45666655

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=82.84  E-value=2.7  Score=30.75  Aligned_cols=79  Identities=27%  Similarity=0.442  Sum_probs=52.7

Q ss_pred             cccccccccCChHHHHHHHHHhCCCCCccccccc----ccccCchHHHHHHhhcCCCCCcccCc--c--h--hhhcChHH
Q psy6676          30 KCTECGKGFCQSRTLAVHKILHLEESPHKCPVCS----RSFNQRSNLKTHLLTHTDIKPYNCAA--C--G--KVFRRNCD   99 (144)
Q Consensus        30 ~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~----~~~~~~~~l~~h~~~h~~~~~~~C~~--C--~--~~f~~~~~   99 (144)
                      .|..|...|-+.-.|..|++..+. +-+.|+.-+    ..|.+...|..|.+..    .|.|.+  |  +  ..|.+...
T Consensus       222 ~C~FC~~~FYdDDEL~~HcR~~HE-~ChICD~v~p~~~QYFK~Y~~Le~HF~~~----hy~ct~qtc~~~k~~vf~~~~e  296 (493)
T COG5236         222 LCIFCKIYFYDDDELRRHCRLRHE-ACHICDMVGPIRYQYFKSYEDLEAHFRNA----HYCCTFQTCRVGKCYVFPYHTE  296 (493)
T ss_pred             hhhhccceecChHHHHHHHHhhhh-hhhhhhccCccchhhhhCHHHHHHHhhcC----ceEEEEEEEecCcEEEeccHHH
Confidence            589999999888889999887663 334444322    2456667777777643    255533  3  2  47899999


Q ss_pred             HHHhHhhccCCCCC
Q psy6676         100 LRRHSLTHNLGSAT  113 (144)
Q Consensus       100 l~~H~~~h~~~~~~  113 (144)
                      |..|+-.-|.....
T Consensus       297 l~~h~~~~h~~~~~  310 (493)
T COG5236         297 LLEHLTRFHKVNAR  310 (493)
T ss_pred             HHHHHHHHhhcccc
Confidence            99998765554433

>smart00614 ZnF_BED BED zinc finger

Probab=82.11  E-value=0.99  Score=23.07  Aligned_cols=22  Identities=41%  Similarity=0.773  Sum_probs=15.1

Q ss_pred             CcccCcchhhhcCh-----HHHHHhHh
Q psy6676          84 PYNCAACGKVFRRN-----CDLRRHSL  105 (144)
Q Consensus        84 ~~~C~~C~~~f~~~-----~~l~~H~~  105 (144)
                      .-.|..|++.+...     +.|.+|++
T Consensus        18 ~a~C~~C~~~l~~~~~~gTs~L~rHl~   44 (50)
T smart00614       18 RAKCKYCGKKLSRSSKGGTSNLRRHLR   44 (50)
T ss_pred             EEEecCCCCEeeeCCCCCcHHHHHHHH
Confidence            35677777777554     57777877

DNA-binding domain in chromatin-boundary-element-binding proteins and transposases

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=82.08  E-value=1.5  Score=28.38  Aligned_cols=34  Identities=18%  Similarity=0.512  Sum_probs=23.6

Q ss_pred             CCCCcccccccccccCchHHHHHHhhcCCCCCcccCcchhhhc
Q psy6676          53 EESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFR   95 (144)
Q Consensus        53 ~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~   95 (144)
                      ...-|.|+.|+..|.....+.         ..|.|+.||....
T Consensus       106 ~~~~Y~Cp~c~~r~tf~eA~~---------~~F~Cp~Cg~~L~  139 (158)
T TIGR00373       106 NNMFFICPNMCVRFTFNEAME---------LNFTCPRCGAMLD  139 (158)
T ss_pred             CCCeEECCCCCcEeeHHHHHH---------cCCcCCCCCCEee
Confidence            345688888888776665553         3588988886543

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

>PRK06266 transcription initiation factor E subunit alpha; Validated

Probab=81.86  E-value=0.7  Score=30.59  Aligned_cols=34  Identities=21%  Similarity=0.622  Sum_probs=22.4

Q ss_pred             CCCcccccccccccCchHHHHHHhhcCCCCCcccCcchhhhcC
Q psy6676          54 ESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRR   96 (144)
Q Consensus        54 ~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~   96 (144)
                      ..-|.|+.|+..|.....+.         ..|.|+.||.....
T Consensus       115 ~~~Y~Cp~C~~rytf~eA~~---------~~F~Cp~Cg~~L~~  148 (178)
T PRK06266        115 NMFFFCPNCHIRFTFDEAME---------YGFRCPQCGEMLEE  148 (178)
T ss_pred             CCEEECCCCCcEEeHHHHhh---------cCCcCCCCCCCCee
Confidence            45678888887776654431         35888888865543

>KOG2785|consensus

Probab=81.76  E-value=1.5  Score=32.27  Aligned_cols=73  Identities=15%  Similarity=0.118  Sum_probs=39.0

Q ss_pred             ccccccccccCChHHHHHHHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcch---hhhcChHHHHHhHh
Q psy6676          29 FKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACG---KVFRRNCDLRRHSL  105 (144)
Q Consensus        29 ~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~---~~f~~~~~l~~H~~  105 (144)
                      -.|-.|+..+.+...-..||..++|-  |....  ........|...+...-+ ..+.|..|.   +.|.+..+.+.|+.
T Consensus       167 t~CLfC~~~~k~~e~~~~HM~~~Hgf--fIPdr--eYL~D~~GLl~YLgeKV~-~~~~CL~CN~~~~~f~sleavr~HM~  241 (390)
T KOG2785|consen  167 TDCLFCDKKSKSLEENLKHMFKEHGF--FIPDR--EYLTDEKGLLKYLGEKVG-IGFICLFCNELGRPFSSLEAVRAHMR  241 (390)
T ss_pred             cceeecCCCcccHHHHHHHHhhccCC--cCCch--HhhhchhHHHHHHHHHhc-cCceEEEeccccCcccccHHHHHHHh
Confidence            44555555555555555555554431  11111  111122233333322222 348899998   99999999999985


Q ss_pred             h
Q psy6676         106 T  106 (144)
Q Consensus       106 ~  106 (144)
                      .
T Consensus       242 ~  242 (390)
T KOG2785|consen  242 D  242 (390)
T ss_pred             h
Confidence            3

>KOG3408|consensus

Probab=80.88  E-value=1.2  Score=27.35  Aligned_cols=27  Identities=22%  Similarity=0.413  Sum_probs=22.8

Q ss_pred             CCCCCcccCcchhhhcChHHHHHhHhh
Q psy6676          80 TDIKPYNCAACGKVFRRNCDLRRHSLT  106 (144)
Q Consensus        80 ~~~~~~~C~~C~~~f~~~~~l~~H~~~  106 (144)
                      .|-..|.|..|.+-|.+...|..|.++
T Consensus        53 PG~GqfyCi~CaRyFi~~~~l~~H~kt   79 (129)
T KOG3408|consen   53 PGGGQFYCIECARYFIDAKALKTHFKT   79 (129)
T ss_pred             CCCceeehhhhhhhhcchHHHHHHHhc
Confidence            455669999999999999999999865

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=80.85  E-value=1  Score=29.24  Aligned_cols=35  Identities=17%  Similarity=0.445  Sum_probs=27.0

Q ss_pred             CCCCcccccccccccCChHHHHHHHHHhCCCCCccccccccccc
Q psy6676          24 SKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFN   67 (144)
Q Consensus        24 ~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~   67 (144)
                      .+..-|.|+.|+..|.....+.         ..|.|+.||....
T Consensus       105 ~~~~~Y~Cp~c~~r~tf~eA~~---------~~F~Cp~Cg~~L~  139 (158)
T TIGR00373       105 TNNMFFICPNMCVRFTFNEAME---------LNFTCPRCGAMLD  139 (158)
T ss_pred             cCCCeEECCCCCcEeeHHHHHH---------cCCcCCCCCCEee
Confidence            3456799999999998777664         2499999997543

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	144
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		3e-20
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		3e-20
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		3e-13
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		2e-12
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		2e-06
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		2e-11
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		8e-11
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		8e-11
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		9e-11
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		9e-11
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		1e-10
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		1e-10
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		2e-10
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		4e-10
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		1e-09
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		1e-09
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		3e-09
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		5e-09
1x6e_A	72	Solution Structures Of The C2h2 Type Zinc Finger Do		8e-09
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		1e-08
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		5e-08
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		7e-08
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		1e-07
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		1e-06
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		1e-06
1llm_C	88	Crystal Structure Of A Zif23-Gcn4 Chimera Bound To		2e-06
1f2i_G	73	Cocrystal Structure Of Selected Zinc Finger Dimer B		2e-05
1f2i_G	73	Cocrystal Structure Of Selected Zinc Finger Dimer B		7e-04
4gzn_C	60	Mouse Zfp57 Zinc Fingers In Complex With Methylated		2e-05
2adr_A	60	Adr1 Dna-Binding Domain From Saccharomyces Cerevisi		2e-05
1tf6_A	190	Co-crystal Structure Of Xenopus Tfiiia Zinc Finger		4e-05
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		7e-05
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		3e-04
2yta_A	41	Solution Structure Of C2h2 Type Zinc Finger Domain		1e-04
2ely_A	46	Solution Structure Of The Third Zf-C2h2 Domain From		1e-04
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		2e-04
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		2e-04
2epa_A	72	Solution Structure Of The First And Second Zf-C2h2		2e-04
2ytr_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		2e-04
2emc_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		3e-04
2eq0_A	46	Solution Structure Of The 8th C2h2 Type Zinc Finger		6e-04
2ysv_A	42	Solution Structure Of C2h2 Type Zinc Finger Domain		6e-04
2em7_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		7e-04
2yti_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		9e-04

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 94.0 bits (232), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 44/83 (53%), Positives = 52/83 (62%)
Query: 26  EKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPY 85
           EKP+KC ECGK F QS  L  H+  H  E P+KCP C +SF+Q S+L+ H  THT  KPY
Sbjct: 2   EKPYKCPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKPY 61
Query: 86  NCAACGKVFRRNCDLRRHSLTHN 108
            C  CGK F R+  L RH  TH 
Sbjct: 62  KCPECGKSFSRSDHLSRHQRTHQ 84

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 94.0 bits (232), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 43/86 (50%), Positives = 53/86 (61%)
Query: 22  IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTD 81
            H+ EKP+KC ECGK F   + L  H+  H  E P+KCP C +SF+QR+NL+ H  THT 
Sbjct: 43  THTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTG 102
Query: 82  IKPYNCAACGKVFRRNCDLRRHSLTH 107
            KPY C  CGK F +   LR H  TH
Sbjct: 103 EKPYACPECGKSFSQLAHLRAHQRTH 128

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 47/80 (58%)
Query: 29  FKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCA 88
           F C  CGK F +S TL+ H ++H +  P+ C  C + F+Q+S++K H   HT  KP+ C 
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61
Query: 89  ACGKVFRRNCDLRRHSLTHN 108
            CGK F ++ +L  HS  H 
Sbjct: 62  VCGKAFSQSSNLITHSRKHT 81

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 30/35 (85%), Positives = 32/35 (91%)
Query: 21  YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEES 55
           YIHSKEKPFKC ECGKGFCQSRTLAVHK LH++ S
Sbjct: 66  YIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTS 100

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 26/50 (52%)
Query: 59  CPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTHN 108
           C  C R F +  NL  H  THTD +PY C  C K FRR   LR H   H+
Sbjct: 20  CKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHS 69

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 26  EKPFKC--TECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIK 83
           E+P+ C    C + F QS +L  H  +H  + P +C +C R+F++  +L TH+ THT  K
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 84  PYNCAACGKVFRRNCDLRRHSLTH 107
           P+ C  CG+ F R+ + +RH+  H
Sbjct: 62  PFACDICGRKFARSDERKRHTKIH 85

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 62.4 bits (150), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 26  EKPFKC--TECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIK 83
           E+P+ C    C + F +S  L  H  +H  + P +C +C R+F++  +L TH+ THT  K
Sbjct: 2   ERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 84  PYNCAACGKVFRRNCDLRRHSLTH 107
           P+ C  CG+ F R+ + +RH+  H
Sbjct: 62  PFACDICGRKFARSDERKRHTKIH 85

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 62.4 bits (150), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 26  EKPFKC--TECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIK 83
           E+P+ C    C + F +S  L  H  +H  + P +C +C R+F++  +L TH+ THT  K
Sbjct: 2   ERPYACPVESCDRRFSRSADLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 84  PYNCAACGKVFRRNCDLRRHSLTH 107
           P+ C  CG+ F R+ + +RH+  H
Sbjct: 62  PFACDICGRKFARSDERKRHTKIH 85

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 62.4 bits (150), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 26  EKPFKC--TECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIK 83
           E+P+ C    C + F  S  L  H  +H  + P +C +C R+F++  +L TH+ THT  K
Sbjct: 2   ERPYACPVESCDRRFSDSSNLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 84  PYNCAACGKVFRRNCDLRRHSLTH 107
           P+ C  CG+ F R+ + +RH+  H
Sbjct: 62  PFACDICGRKFARSDERKRHTKIH 85

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 62.4 bits (150), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 26  EKPFKC--TECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIK 83
           E+P+ C    C + F +S  L  H  +H  + P +C +C R+F++  +L TH+ THT  K
Sbjct: 2   ERPYACPVESCDRRFSRSAELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 84  PYNCAACGKVFRRNCDLRRHSLTH 107
           P+ C  CG+ F R+ + +RH+  H
Sbjct: 62  PFACDICGRKFARSDERKRHTKIH 85

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 26  EKPFKC--TECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIK 83
           E+P+ C    C + F +S  L  H  +H  + P +C +C R+F++  +L TH+ THT  K
Sbjct: 1   ERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 60
Query: 84  PYNCAACGKVFRRNCDLRRHSLTH 107
           P+ C  CG+ F R+ + +RH+  H
Sbjct: 61  PFACDICGRKFARSDERKRHTKIH 84

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 26  EKPFKC--TECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIK 83
           E+P+ C    C + F +S  L  H  +H  + P +C +C R+F++  +L TH+ THT  K
Sbjct: 2   ERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 84  PYNCAACGKVFRRNCDLRRHSLTH 107
           P+ C  CG+ F R+ + +RH+  H
Sbjct: 62  PFACDICGRKFARSDERKRHTKIH 85

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 31  CTECGKGFCQSRTLAVHKILHLEESPHKCPV--CSRSFNQRSNLKTHLLTHTDIKPYNCA 88
           C ECGK F +S  L  H+++H  E P +C    C + F+   NL+TH+  HT  +PY C 
Sbjct: 37  CAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCP 96
Query: 89  --ACGKVFRRNCDLRRHSLTH 107
              C K F ++ +L+ H LTH
Sbjct: 97  FDGCNKKFAQSTNLKSHILTH 117

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Query: 23  HSKEKPFKCTECGKGFCQSRTLAVHKI---LHLEESPHKCPVCSRSFNQRSNLKTHLLTH 79
           H+ EKPF+C +CGK + +   L  H+    ++  E    C VC  +F +R  L+ H+++H
Sbjct: 30  HTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSH 89
Query: 80  TDIKPYNCAACGKVFRRNCDLRRHSL 105
           T   PY C++C + F +  DL+ H +
Sbjct: 90  TGEMPYKCSSCSQQFMQKKDLQSHMI 115

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 26 EKPFKC--TECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIK 83
          E+P+ C    C + F Q   L  H  +H  + P +C +C R+F+Q+++L  H+ THT  K
Sbjct: 2  ERPYACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQQASLNAHIRTHTGEK 61
Query: 84 PYNCAACGKVF 94
          P+ C  CG+ F
Sbjct: 62 PFACDICGRKF 72

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
Query: 23  HSKEKPFKC--TECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHT 80
           H+ EKP++C   +C + F +S  L  H+  H    P +C  C R F++  +LKTH  THT
Sbjct: 31  HTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHT 90
Query: 81  DIKPYNC--AACGKVFRRNCDLRRHSLTH 107
             KP++C   +C K F R+ +L RH   H
Sbjct: 91  GEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 26 EKPFKC--TECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIK 83
          E+P+ C    C + F Q   L  H  +H  + P +C +C R+F+Q + L  H+ THT  K
Sbjct: 2  ERPYACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQHTGLNQHIRTHTGEK 61
Query: 84 PYNCAACGKVF 94
          P+ C  CG+ F
Sbjct: 62 PFACDICGRKF 72

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 25/59 (42%), Positives = 34/59 (57%)
Query: 26 EKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKP 84
          +KP+KC  C   F     LA HK +H  E P++C +C   FN+ +NLKTH   H+  KP
Sbjct: 15 DKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKP 73

>pdb|1X6E|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Zinc Finger Protein 24 Length = 72

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 33/56 (58%)
Query: 26 EKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTD 81
          EKP+ C ECGK F +S  L  H+ +H  E P+KC  C ++F+Q S L  H   HT 
Sbjct: 12 EKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTS 67

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Query: 24  SKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIK 83
           S +K + C +CGK F        H  +HL   P+ C VC + F  + +L  H+  HT IK
Sbjct: 6   SGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIK 64
Query: 84  PYNCAACGKVFRRNCDLRRH 103
           PY C  C K F       RH
Sbjct: 65  PYECNICAKRFMWRDSFHRH 84

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 32/56 (57%)
Query: 29 FKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKP 84
          +KC ECGK F  S  L+ H+  H  E P+KC  C ++F QRS+L  H   HT   P
Sbjct: 19 YKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGP 74

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 21  YIHSKEKPFKCTECG-----KGFCQSRTLAVHKILHLEESPHKCPV--CSRSFNQRSNLK 73
           +IH + K F C   G     + F     L VH   H  E PHKC    C +S+++  NLK
Sbjct: 27  HIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLK 86
Query: 74  THLLTHTDIKPYNC--AACGKVFRRNCDLRRH 103
           THL +HT  KPY C    C K F    D  +H
Sbjct: 87  THLRSHTGEKPYMCEHEGCSKAFSNASDRAKH 118

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 31  CTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDI--KPYNCA 88
           C  CGK F     L  HK+ H  E P+ CPVC   F ++  +  H+ +H     KPY C 
Sbjct: 10  CEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQ 69
Query: 89  ACGKVFRRNCDLRRH 103
           +CGK F R   L  H
Sbjct: 70  SCGKGFSRPDHLNGH 84

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 36/80 (45%)
Query: 28  PFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNC 87
           P KC  CGK F +   L  H   H    P+KC  C  +    S+L  HL  H+D +P+ C
Sbjct: 8   PHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKC 67
Query: 88  AACGKVFRRNCDLRRHSLTH 107
             C    R +  L  H  +H
Sbjct: 68  QICPYASRNSSQLTVHLRSH 87

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 22  IHSKEKPFKCT--ECGKGFCQSRTLAVHKILHLEESPHKCPV--CSRSFNQRSNLKTHLL 77
           +H+ EKPF C    CGK F +S  L +HK  H  E P KC    C R F   S+ K H+ 
Sbjct: 84  VHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMH 143
Query: 78  THTDIK 83
            HT  K
Sbjct: 144 VHTSDK 149

>pdb|1LLM|C Chain C, Crystal Structure Of A Zif23-Gcn4 Chimera Bound To Dna Length = 88

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 20/48 (41%), Positives = 32/48 (66%)
Query: 56  PHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCDLRRH 103
           P +C +C R+F++  +L TH+ THT  KP+ C  CG+ F R+ + +RH
Sbjct: 3   PFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH 50

>pdb|1F2I|G Chain G, Cocrystal Structure Of Selected Zinc Finger Dimer Bound To Dna Length = 73

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 10 MALETINLAQGYIHSKEKPFKCT--ECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFN 67
          M    +N    Y+  K +P+ C    C + F +S  L  H  +H  + P +C +C R+F+
Sbjct: 1  MEPHPMNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFS 60
Query: 68 QRSNLKTHLLTHT 80
          +  +L TH+ THT
Sbjct: 61 RSDHLTTHIRTHT 73

>pdb|1F2I|G Chain G, Cocrystal Structure Of Selected Zinc Finger Dimer Bound To Dna Length = 73

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 56  PHKCPV--CSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           P+ CPV  C R F++   L  H+  HT  KP+ C  C + F R+  L  H  TH
Sbjct: 19  PYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72

>pdb|4GZN|C Chain C, Mouse Zfp57 Zinc Fingers In Complex With Methylated Dna Length = 60

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 26 EKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTD 81
          E+PF C  CGK +  +  L+ H+  HL   P  CP C + F  +S +  HL  H +
Sbjct: 2  ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQN 57

>pdb|2ADR|A Chain A, Adr1 Dna-Binding Domain From Saccharomyces Cerevisiae, Nmr, 25 Structures Length = 60

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 59  CPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCDLRRHS 104
           C VC+R+F ++ +LK H  +HT+ KPY C  C + F R   L RH+
Sbjct: 5   CEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHA 50

>pdb|1TF6|A Chain A, Co-crystal Structure Of Xenopus Tfiiia Zinc Finger Domain Bound To The 5s Ribosomal Rna Gene Internal Control Region Length = 190

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 43/93 (46%), Gaps = 8/93 (8%)
Query: 23  HSKEKPFKCTE--CGKGFCQSRTLAVHKILHLEESPHKCPV--CSRSFNQRSNLKTHLLT 78
           H+ EKPF C E  C KGF     L  H + H  E    C    C   F  ++N+K H   
Sbjct: 37  HTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNR 96
Query: 79  HTDIK--PYNC--AACGKVFRRNCDLRRHSLTH 107
             +IK   Y C    CGK F+++  L+ H  +H
Sbjct: 97  FHNIKICVYVCHFENCGKAFKKHNQLKVHQFSH 129

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 42.7 bits (99), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 22  IHSKEKPFKCTE--CGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTH 79
            H+ EKP+KCT   C   F +S  L  H   H    P +C VC+RSF++  +L  H+  H
Sbjct: 39  THTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRH 98
Query: 80  TD 81
            +
Sbjct: 99  QN 100

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 60  PVCSRSFNQRSNLKTHLLTHTDIKPYNCA--ACGKVFRRNCDLRRHSLTH 107
           P C++ + + S+LK HL THT  KPY C    C   F R+ +L RH   H
Sbjct: 21  PGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKH 70

>pdb|2YTA|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 3 In Zinc Finger Protein 32 Length = 41

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/33 (54%), Positives = 22/33 (66%)
Query: 24 SKEKPFKCTECGKGFCQSRTLAVHKILHLEESP 56
          S EKP++C ECGK F Q  +LAVH+ LH    P
Sbjct: 6  SGEKPYQCKECGKSFSQRGSLAVHERLHTGSGP 38

>pdb|2ELY|A Chain A, Solution Structure Of The Third Zf-C2h2 Domain From Human Zinc Finger Protein 224 Length = 46

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 20/31 (64%)
Query: 26 EKPFKCTECGKGFCQSRTLAVHKILHLEESP 56
          EKPFKC ECGKGF +   L VH  LH  E P
Sbjct: 10 EKPFKCVECGKGFSRRSALNVHHKLHTGEKP 40

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 62  CSRSFNQRSNLKTHLLTHTDIKPYNC--AACGKVFRRNCDLRRHSLTHN 108
           C +++ + S+LK HL THT  KPY+C    CG  F R+ +L RH   H 
Sbjct: 14  CGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 62

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 62  CSRSFNQRSNLKTHLLTHTDIKPYNC--AACGKVFRRNCDLRRHSLTHN 108
           C +++ + S+LK HL THT  KPY+C    CG  F R+ +L RH   H 
Sbjct: 13  CGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61

>pdb|2EPA|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domains From Human Krueppel-Like Factor 10 Length = 72

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 60  PVCSRSFNQRSNLKTHLLTHTDIKPYNCA--ACGKVFRRNCDLRRHSLTH 107
           P C +++ + S+LK H  THT  KP++C+   C + F R+ +L RH  TH
Sbjct: 23  PGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72

>pdb|2YTR|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 760- 792) Of Human Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 21/31 (67%)
Query: 26 EKPFKCTECGKGFCQSRTLAVHKILHLEESP 56
          EKP+KC ECGK F Q+  LA H+ +H  E P
Sbjct: 10 EKPYKCNECGKAFSQTSKLARHQRIHTGEKP 40

>pdb|2EMC|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 641- 673) Of Human Zinc Finger Protein 473 Length = 46

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 18 AQGYIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESP 56
          + G   +KE PFKC ECGK F  S  L+ H+++H  E+P
Sbjct: 2  SSGSSGTKEHPFKCNECGKTFSHSAHLSKHQLIHAGENP 40

>pdb|2EQ0|A Chain A, Solution Structure Of The 8th C2h2 Type Zinc Finger Domain Of Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 39.7 bits (91), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 17/25 (68%), Positives = 17/25 (68%)
Query: 83  KPYNCAACGKVFRRNCDLRRHSLTH 107
           KPY C  CGKVFRRN  L RH L H
Sbjct: 11  KPYKCHECGKVFRRNSHLARHQLIH 35

>pdb|2YSV|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 17 In Zinc Finger Protein 473 Length = 42

Iteration: 1
 Score = 39.7 bits (91), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 17/32 (53%), Positives = 22/32 (68%)
Query: 24 SKEKPFKCTECGKGFCQSRTLAVHKILHLEES 55
          S EKP+ C ECGK F QS  L++H+ +H  ES
Sbjct: 6  SGEKPYVCQECGKAFTQSSCLSIHRRVHTGES 37

>pdb|2EM7|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 339- 371) Of Human Zinc Finger Protein 224 Length = 46

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 20/31 (64%)
Query: 26 EKPFKCTECGKGFCQSRTLAVHKILHLEESP 56
          EKP+KC ECGKGF   R L  H ++H  E P
Sbjct: 10 EKPYKCEECGKGFICRRDLYTHHMVHTGEKP 40

>pdb|2YTI|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 564- 596) Of Human Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 39.3 bits (90), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 21/31 (67%)
Query: 26 EKPFKCTECGKGFCQSRTLAVHKILHLEESP 56
          EKP+KC ECGK F Q+  LA H+ +H  E P
Sbjct: 10 EKPYKCNECGKVFTQNSHLARHRGIHTGEKP 40

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	144
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	5e-31
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	5e-24
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-05
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-30
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	3e-23
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-18
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-30
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	4e-30
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	7e-30
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	9e-30
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-19
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	4e-19
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-09
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	4e-29
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	4e-21
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	8e-08
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	4e-29
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	6e-18
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	3e-28
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	6e-28
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	8e-18
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-27
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	8e-25
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	4e-20
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	9e-15
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-07
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-27
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	9e-26
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	4e-27
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-24
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	4e-13
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	5e-27
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	7e-18
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	5e-04
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	2e-25
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	8e-21
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-24
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	2e-23
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	3e-19
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	9e-15
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-24
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	6e-24
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	1e-22
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	3e-14
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	2e-24
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	4e-16
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	3e-24
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	5e-13
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	3e-04
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	4e-23
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	2e-18
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	5e-23
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	7e-23
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	4e-19
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	4e-13
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	3e-22
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	4e-05
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	5e-22
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	2e-18
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	8e-10
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	8e-22
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	3e-15
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	1e-06
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-20
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-18
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	3e-08
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	3e-20
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	5e-05
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	3e-19
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	3e-17
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-05
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	3e-19
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	1e-15
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	6e-19
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	3e-17
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-04
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	5e-16
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	4e-11
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	5e-11
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	2e-15
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	3e-14
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	1e-07
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	3e-04
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	1e-14
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	4e-05
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	5e-14
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	1e-12
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	8e-05
2epa_A	72	Krueppel-like factor 10; transforming growth facto	1e-12
2epa_A	72	Krueppel-like factor 10; transforming growth facto	2e-08
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	3e-12
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	4e-05
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	5e-04
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-12
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-11
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-06
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	8e-12
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	3e-06
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	9e-12
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	5e-09
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-05
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	9e-12
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-09
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	4e-06
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-11
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	6e-10
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	5e-06
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-11
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-06
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-11
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-07
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-11
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-10
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-05
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-11
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-09
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-06
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-11
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-09
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-05
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-11
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-09
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-05
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-11
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	6e-09
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	5e-06
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-11
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-09
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-06
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-11
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-09
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-05
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-11
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-09
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-05
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-11
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-08
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-06
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-11
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-09
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-05
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-11
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-05
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-11
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-09
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-06
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-11
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-05
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-11
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-06
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-11
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-09
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-06
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-11
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-09
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-06
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	4e-11
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	8e-08
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	9e-06
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-11
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-05
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-11
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-06
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	5e-11
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-05
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	5e-11
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	5e-09
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-05
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-11
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-09
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-06
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-11
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-08
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-05
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-11
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-08
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-06
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-11
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-08
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-06
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	5e-11
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	4e-08
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	7e-06
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-11
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-08
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-06
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-11
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-09
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-06
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-11
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-11
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-05
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-11
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-09
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-06
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-11
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-08
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-05
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-11
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-08
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-05
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-11
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-09
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-06
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-11
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	8e-09
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-05
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-11
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-08
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-06
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	7e-11
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	3e-08
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	7e-11
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	1e-05
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-11
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-04
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-11
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-09
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-05
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	9e-11
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	5e-09
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	1e-05
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	9e-11
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-09
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	9e-06
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-11
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-08
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-05
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-11
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-08
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-06
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	9e-11
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-08
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	5e-06
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-11
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-08
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-05
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-10
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-09
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-06
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-10
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-08
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-05
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-10
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-05
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-10
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-06
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-10
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-09
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-06
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-10
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-09
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-06
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-10
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-08
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-05
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	1e-10
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	6e-05
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-10
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-08
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-06
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-10
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-05
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-10
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-08
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-05
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-10
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-06
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-10
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-04
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-10
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	7e-06
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-10
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-05
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	2e-10
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	1e-05
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-10
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-05
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-10
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-08
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-05
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-10
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-09
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-05
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-10
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-09
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-05
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-10
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-08
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-05
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-10
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-08
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-05
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-10
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-08
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-05
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-10
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-05
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	2e-10
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	8e-09
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-10
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-09
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-05
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-10
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-08
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-06
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-10
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-05
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-10
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-08
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	5e-06
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	4e-10
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	2e-08
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	3e-06
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	6e-10
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	6e-08
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	1e-05
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	8e-10
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-06
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	9e-10
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	3e-07
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-05
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-09
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-08
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-05
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	2e-09
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	7e-07
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	3e-09
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	1e-07
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	6e-05
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-09
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-08
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-07
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	7e-09
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-06
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	2e-08
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	3e-06
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	1e-04
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	3e-08
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	9e-06
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	3e-08
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	2e-04
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	3e-08
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	7e-06
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	3e-04
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	5e-07
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	3e-06
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	3e-04
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	7e-07
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	5e-06
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	1e-05
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	1e-06
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	1e-06
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	3e-04
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	6e-04
1ej6_B	1275	Lambda1; icosahedral, non-equivalence, dsRNA virus	5e-06
1ej6_B	1275	Lambda1; icosahedral, non-equivalence, dsRNA virus	8e-04
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	3e-04
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	4e-04
1ard_A	29	Yeast transcription factor ADR1; transcription reg	8e-04

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score =  105 bits (266), Expect = 5e-31
 Identities = 27/85 (31%), Positives = 36/85 (42%)

Query: 23  HSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDI 82
                P KC  CGK F +   L  H   H    P+KC  C  +    S+L  HL  H+D 
Sbjct: 3   SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDE 62

Query: 83  KPYNCAACGKVFRRNCDLRRHSLTH 107
           +P+ C  C    R +  L  H  +H
Sbjct: 63  RPFKCQICPYASRNSSQLTVHLRSH 87

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 87.9 bits (219), Expect = 5e-24
 Identities = 21/67 (31%), Positives = 30/67 (44%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTD 81
           H+  KP+KC  C      S +L  H  +H +E P KC +C  +    S L  HL +HT 
Sbjct: 30 CHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHTG 89

Query: 82 IKPYNCA 88
              +  
Sbjct: 90 DSGPSSG 96

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 40.5 bits (96), Expect = 1e-05
 Identities = 10/30 (33%), Positives = 13/30 (43%)

Query: 78  THTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +     P+ C  CGK F R   L+ H   H
Sbjct: 2   SSGSSGPHKCEVCGKCFSRKDKLKTHMRCH 31

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score =  104 bits (262), Expect = 2e-30
 Identities = 28/86 (32%), Positives = 46/86 (53%)

Query: 22  IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTD 81
               +K F C  CG+ F +S  L +H+  H +E P+ C +C ++F ++ +L+ H   H+ 
Sbjct: 11  PSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSK 70

Query: 82  IKPYNCAACGKVFRRNCDLRRHSLTH 107
            KP+ C  CGK F ++  L  H   H
Sbjct: 71  EKPFKCQECGKGFCQSRTLAVHKTLH 96

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 86.3 bits (215), Expect = 3e-23
 Identities = 21/68 (30%), Positives = 30/68 (44%)

Query: 22  IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTD 81
            H+ E+P+ C  C K F +   L  H+ +H +E P KC  C + F Q   L  H   H  
Sbjct: 39  THTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQ 98

Query: 82  IKPYNCAA 89
                 A+
Sbjct: 99  TSSPTAAS 106

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 74.0 bits (183), Expect = 2e-18
 Identities = 24/67 (35%), Positives = 30/67 (44%)

Query: 41  SRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCDL 100
           S   +  ++    +    C  C R F +  NL  H  THTD +PY C  C K FRR   L
Sbjct: 2   SSGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHL 61

Query: 101 RRHSLTH 107
           R H   H
Sbjct: 62  RDHRYIH 68

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  106 bits (268), Expect = 3e-30
 Identities = 42/86 (48%), Positives = 49/86 (56%)

Query: 22  IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTD 81
            H+ EKP+ C ECGK F Q   L  H+  H  E P+KCP C +SF++  NL TH  THT 
Sbjct: 99  THTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTG 158

Query: 82  IKPYNCAACGKVFRRNCDLRRHSLTH 107
            KPY C  CGK F R   L  H  TH
Sbjct: 159 EKPYKCPECGKSFSRRDALNVHQRTH 184

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  106 bits (267), Expect = 4e-30
 Identities = 40/86 (46%), Positives = 51/86 (59%)

Query: 22  IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTD 81
           +   EKP+ C ECGK F +S  LA H+  H  E P+KCP C +SF+ + +L  H  THT 
Sbjct: 15  LEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTG 74

Query: 82  IKPYNCAACGKVFRRNCDLRRHSLTH 107
            KPY C  CGK F +  +LR H  TH
Sbjct: 75  EKPYKCPECGKSFSQRANLRAHQRTH 100

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  105 bits (266), Expect = 7e-30
 Identities = 43/86 (50%), Positives = 53/86 (61%)

Query: 22  IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTD 81
            H+ EKP+KC ECGK F   + L  H+  H  E P+KCP C +SF+QR+NL+ H  THT 
Sbjct: 43  THTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTG 102

Query: 82  IKPYNCAACGKVFRRNCDLRRHSLTH 107
            KPY C  CGK F +   LR H  TH
Sbjct: 103 EKPYACPECGKSFSQLAHLRAHQRTH 128

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  105 bits (265), Expect = 9e-30
 Identities = 41/86 (47%), Positives = 51/86 (59%)

Query: 22  IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTD 81
            H+ EKP+KC ECGK F Q   L  H+  H  E P+ CP C +SF+Q ++L+ H  THT 
Sbjct: 71  THTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTG 130

Query: 82  IKPYNCAACGKVFRRNCDLRRHSLTH 107
            KPY C  CGK F R  +L  H  TH
Sbjct: 131 EKPYKCPECGKSFSREDNLHTHQRTH 156

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 78.6 bits (195), Expect = 3e-19
 Identities = 29/63 (46%), Positives = 37/63 (58%)

Query: 22  IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTD 81
            H+ EKP+KC ECGK F +   L  H+  H  E P+KCP C +SF++R  L  H  THT 
Sbjct: 127 THTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTG 186

Query: 82  IKP 84
            K 
Sbjct: 187 KKT 189

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 77.9 bits (193), Expect = 4e-19
 Identities = 28/70 (40%), Positives = 34/70 (48%)

Query: 38  FCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRN 97
              S +      L   E P+ CP C +SF++  +L  H  THT  KPY C  CGK F   
Sbjct: 3   EFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDK 62

Query: 98  CDLRRHSLTH 107
            DL RH  TH
Sbjct: 63  KDLTRHQRTH 72

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 52.4 bits (127), Expect = 2e-09
 Identities = 15/43 (34%), Positives = 17/43 (39%)

Query: 65  SFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           S    S+           KPY C  CGK F R+  L  H  TH
Sbjct: 2   SEFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTH 44

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score =  101 bits (253), Expect = 4e-29
 Identities = 31/84 (36%), Positives = 50/84 (59%), Gaps = 2/84 (2%)

Query: 26  EKPFKC--TECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIK 83
           E+P+ C    C + F QS +L  H  +H  + P +C +C R+F++  +L TH+ THT  K
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61

Query: 84  PYNCAACGKVFRRNCDLRRHSLTH 107
           P+ C  CG+ F R+ + +RH+  H
Sbjct: 62  PFACDICGRKFARSDERKRHTKIH 85

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 80.6 bits (200), Expect = 4e-21
 Identities = 21/59 (35%), Positives = 28/59 (47%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHT 80
          IH+ +KPF+C  C + F +S  L  H   H  E P  C +C R F +    K H   H 
Sbjct: 28 IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHL 86

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 46.3 bits (111), Expect = 8e-08
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEE 54
           H+ EKPF C  CG+ F +S     H  +HL +
Sbjct: 56 THTGEKPFACDICGRKFARSDERKRHTKIHLRQ 88

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score =  101 bits (253), Expect = 4e-29
 Identities = 30/83 (36%), Positives = 38/83 (45%), Gaps = 2/83 (2%)

Query: 23  HSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHT-- 80
            S      C  CGK F     L  HK+ H  E P+ CPVC   F ++  +  H+ +H   
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 61

Query: 81  DIKPYNCAACGKVFRRNCDLRRH 103
             KPY C +CGK F R   L  H
Sbjct: 62  VGKPYICQSCGKGFSRPDHLNGH 84

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 72.5 bits (179), Expect = 6e-18
 Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 3/62 (4%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEES--PHKCPVCSRSFNQRSNLKTHL-LT 78
           HS EKP+ C  CG  F +   ++ H   H      P+ C  C + F++  +L  H+   
Sbjct: 29 SHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQV 88

Query: 79 HT 80
          H+
Sbjct: 89 HS 90

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 99.5 bits (249), Expect = 3e-28
 Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 3/88 (3%)

Query: 23  HSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTH---LLTH 79
            S     +C  C K F     L VH   H  E P +CP C + + ++ NL  H      +
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMN 61

Query: 80  TDIKPYNCAACGKVFRRNCDLRRHSLTH 107
              + + C+ C + FRR  +LR H ++H
Sbjct: 62  RSEQVFTCSVCQETFRRRMELRLHMVSH 89

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 99.1 bits (248), Expect = 6e-28
 Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 3/85 (3%)

Query: 22  IHSKEKPFKCTECGKGFCQSRTLAVH---KILHLEESPHKCPVCSRSFNQRSNLKTHLLT 78
            H+ EKPF+C +CGK + +   L  H     ++  E    C VC  +F +R  L+ H+++
Sbjct: 29  KHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVS 88

Query: 79  HTDIKPYNCAACGKVFRRNCDLRRH 103
           HT   PY C++C + F +  DL+ H
Sbjct: 89  HTGEMPYKCSSCSQQFMQKKDLQSH 113

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 72.9 bits (180), Expect = 8e-18
 Identities = 19/60 (31%), Positives = 36/60 (60%), Gaps = 1/60 (1%)

Query: 22  IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLL-THT 80
           ++  E+ F C+ C + F +   L +H + H  E P+KC  CS+ F Q+ +L++H++  H+
Sbjct: 60  MNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHS 119

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 98.4 bits (246), Expect = 1e-27
 Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 5/90 (5%)

Query: 22  IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPV--CSRSFNQRSNLKTHLLTH 79
            H   +   C ECGK F +S  L  H+++H  E P +C    C + F+   NL+TH+  H
Sbjct: 29  THG-PRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIH 87

Query: 80  TDIKPYNCAA--CGKVFRRNCDLRRHSLTH 107
           T  +PY C    C K F ++ +L+ H LTH
Sbjct: 88  TGDRPYVCPFDGCNKKFAQSTNLKSHILTH 117

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 91.0 bits (227), Expect = 8e-25
 Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 5/87 (5%)

Query: 25  KEKPFKCT--ECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDI 82
           + +   C    C K F  +  +  H   H     H C  C ++F + S LK H L HT  
Sbjct: 2   EPRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGE 60

Query: 83  KPYNCAA--CGKVFRRNCDLRRHSLTH 107
           KP+ C    CGK F  + +LR H   H
Sbjct: 61  KPFQCTFEGCGKRFSLDFNLRTHVRIH 87

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 79.1 bits (196), Expect = 4e-20
 Identities = 28/68 (41%), Positives = 39/68 (57%), Gaps = 4/68 (5%)

Query: 22  IHSKEKPFKCT--ECGKGFCQSRTLAVHKILHLEESPHKCPV--CSRSFNQRSNLKTHLL 77
           +H+ EKPF+CT   CGK F     L  H  +H  + P+ CP   C++ F Q +NLK+H+L
Sbjct: 56  VHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHIL 115

Query: 78  THTDIKPY 85
           TH   K  
Sbjct: 116 THAKAKNN 123

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 65.2 bits (160), Expect = 9e-15
 Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 3/58 (5%)

Query: 52  LEESPHKCPV--CSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +E     CP   C++ F   S ++ HL TH   + + CA CGK F  +  L+RH L H
Sbjct: 1   MEPRTIACPHKGCTKMFRDNSAMRKHLHTHGP-RVHVCAECGKAFVESSKLKRHQLVH 57

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 46.0 bits (110), Expect = 2e-07
 Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 2/39 (5%)

Query: 22  IHSKEKPFKC--TECGKGFCQSRTLAVHKILHLEESPHK 58
           IH+ ++P+ C    C K F QS  L  H + H +   ++
Sbjct: 86  IHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ 124

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 97.6 bits (244), Expect = 2e-27
 Identities = 34/90 (37%), Positives = 49/90 (54%), Gaps = 4/90 (4%)

Query: 22  IHSKEKPFKCT--ECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTH 79
            H+ EKP++C   +C + F +S  L  H+  H    P +C  C R F++  +LKTH  TH
Sbjct: 30  KHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTH 89

Query: 80  TDIKPYNCAA--CGKVFRRNCDLRRHSLTH 107
           T  KP++C    C K F R+ +L RH   H
Sbjct: 90  TGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 93.4 bits (233), Expect = 9e-26
 Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 4/86 (4%)

Query: 26  EKPFKCTE--CGKGFCQSRTLAVHKILHLEESPHKCPV--CSRSFNQRSNLKTHLLTHTD 81
           ++PF C    C K + +   L +H   H  E P++C    C R F++   LK H   HT 
Sbjct: 4   KRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTG 63

Query: 82  IKPYNCAACGKVFRRNCDLRRHSLTH 107
           +KP+ C  C + F R+  L+ H+ TH
Sbjct: 64  VKPFQCKTCQRKFSRSDHLKTHTRTH 89

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 96.4 bits (241), Expect = 4e-27
 Identities = 29/82 (35%), Positives = 38/82 (46%), Gaps = 1/82 (1%)

Query: 22  IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTD 81
             S +K + C +CGK F        H  +HL   P+ C VC + F  + +L  H+  HT 
Sbjct: 4   GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTG 62

Query: 82  IKPYNCAACGKVFRRNCDLRRH 103
           IKPY C  C K F       RH
Sbjct: 63  IKPYECNICAKRFMWRDSFHRH 84

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 89.8 bits (224), Expect = 1e-24
 Identities = 19/80 (23%), Positives = 31/80 (38%), Gaps = 2/80 (2%)

Query: 22  IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTD 81
           +H   +P+ C  CGK F     L  H  +H    P++C +C++ F  R +   H    + 
Sbjct: 31  MHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSF--HRHVTSC 88

Query: 82  IKPYNCAACGKVFRRNCDLR 101
            K Y  A   +         
Sbjct: 89  TKSYEAAKAEQNTTEASGPS 108

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 60.5 bits (148), Expect = 4e-13
 Identities = 10/53 (18%), Positives = 22/53 (41%), Gaps = 2/53 (3%)

Query: 22  IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKT 74
           IH+  KP++C  C K F    +   H+ +      ++     ++  + S   +
Sbjct: 59  IHTGIKPYECNICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEASGPSS 109

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 95.6 bits (239), Expect = 5e-27
 Identities = 22/77 (28%), Positives = 30/77 (38%), Gaps = 1/77 (1%)

Query: 27  KPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYN 86
           KPF+C  C + F +S  L  H   H  E P  C +C R F +    K H      I P  
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH-ILPIL 60

Query: 87  CAACGKVFRRNCDLRRH 103
                ++  +N  L   
Sbjct: 61  EDKVEELLSKNYHLENE 77

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 72.1 bits (178), Expect = 7e-18
 Identities = 13/62 (20%), Positives = 23/62 (37%), Gaps = 4/62 (6%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLL---T 78
           H+ EKPF C  CG+ F +S     H+ +     P          ++  +L+  +     
Sbjct: 25 THTGEKPFACDICGRKFARSDERKRHRDIQHIL-PILEDKVEELLSKNYHLENEVARLKK 83

Query: 79 HT 80
            
Sbjct: 84 LV 85

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 35.9 bits (84), Expect = 5e-04
 Identities = 10/26 (38%), Positives = 14/26 (53%)

Query: 82  IKPYNCAACGKVFRRNCDLRRHSLTH 107
           +KP+ C  C + F R+  L  H  TH
Sbjct: 1   MKPFQCRICMRNFSRSDHLTTHIRTH 26

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 91.3 bits (228), Expect = 2e-25
 Identities = 32/79 (40%), Positives = 47/79 (59%)

Query: 29  FKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCA 88
           F C  CGK F +S TL+ H ++H +  P+ C  C + F+Q+S++K H   HT  KP+ C 
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61

Query: 89  ACGKVFRRNCDLRRHSLTH 107
            CGK F ++ +L  HS  H
Sbjct: 62  VCGKAFSQSSNLITHSRKH 80

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 79.4 bits (197), Expect = 8e-21
 Identities = 28/59 (47%), Positives = 35/59 (59%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHT 80
          IHS  +P+ C  CGK F Q   +  H  +H  E PHKC VC ++F+Q SNL TH   HT
Sbjct: 23 IHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHT 81

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 92.7 bits (231), Expect = 1e-24
 Identities = 23/92 (25%), Positives = 36/92 (39%), Gaps = 6/92 (6%)

Query: 22  IHSKEKPFKC--TECGKGFCQSRTLAVHKILHLEESPHKC--PVCSRSFNQRSNLKTHLL 77
           +    K + C   +CG  + ++  L  H   H  E P  C    C + F    +L  H L
Sbjct: 6   LPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSL 65

Query: 78  THTDIKPYNC--AACGKVFRRNCDLRRHSLTH 107
           THT  K + C    C   F    ++++H    
Sbjct: 66  THTGEKNFTCDSDGCDLRFTTKANMKKHFNRF 97

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 89.6 bits (223), Expect = 2e-23
 Identities = 32/94 (34%), Positives = 43/94 (45%), Gaps = 8/94 (8%)

Query: 22  IHSKEKPFKCTE--CGKGFCQSRTLAVHKILHLEESPHKC--PVCSRSFNQRSNLKTHLL 77
            H+ EKPF C E  C KGF     L  H + H  E    C    C   F  ++N+K H  
Sbjct: 36  KHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFN 95

Query: 78  THTDIK--PYNCAA--CGKVFRRNCDLRRHSLTH 107
              +IK   Y C    CGK F+++  L+ H  +H
Sbjct: 96  RFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSH 129

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 78.4 bits (194), Expect = 3e-19
 Identities = 22/91 (24%), Positives = 34/91 (37%), Gaps = 6/91 (6%)

Query: 22  IHSKEK--PFKCT--ECGKGFCQSRTLAVHKILHLEESPHKC--PVCSRSFNQRSNLKTH 75
                K   + C    CGK F +   L VH+  H ++ P++C    C + F+  S LK H
Sbjct: 96  RFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRH 155

Query: 76  LLTHTDIKPYNCAACGKVFRRNCDLRRHSLT 106
              H         +C  V +      +H   
Sbjct: 156 EKVHAGYPCKKDDSCSFVGKTWTLYLKHVAE 186

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 66.5 bits (163), Expect = 9e-15
 Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 4/65 (6%)

Query: 47  HKILHLEESPHKC--PVCSRSFNQRSNLKTHLLTHTDIKPYNC--AACGKVFRRNCDLRR 102
            K L +    + C    C  ++N+   L+ HL  HT  KP+ C    C K F     L R
Sbjct: 3   EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTR 62

Query: 103 HSLTH 107
           HSLTH
Sbjct: 63  HSLTH 67

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 90.7 bits (226), Expect = 2e-24
 Identities = 37/96 (38%), Positives = 45/96 (46%), Gaps = 10/96 (10%)

Query: 22  IHSKEKPFKCTECG-----KGFCQSRTLAVHKILHLEESPHKCPV--CSRSFNQRSNLKT 74
           IH + K F C   G     + F     L VH   H  E PHKC    C +S+++  NLKT
Sbjct: 28  IHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKT 87

Query: 75  HLLTHTDIKPYNC--AACGKVFRRNCDLRRHSL-TH 107
           HL +HT  KPY C    C K F    D  +H   TH
Sbjct: 88  HLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTH 123

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 89.6 bits (223), Expect = 6e-24
 Identities = 32/93 (34%), Positives = 44/93 (47%), Gaps = 7/93 (7%)

Query: 22  IHSKEKPFKCT--ECGKGFCQSRTLAVHKILHLEESPHKC--PVCSRSFNQRSNLKTHLL 77
            H+ EKP KCT   C K + +   L  H   H  E P+ C    CS++F+  S+   H  
Sbjct: 61  RHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQN 120

Query: 78  -THTDIKPYNCAA--CGKVFRRNCDLRRHSLTH 107
            TH++ KPY C    C K +     LR+H  T 
Sbjct: 121 RTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTV 153

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 86.1 bits (214), Expect = 1e-22
 Identities = 23/92 (25%), Positives = 34/92 (36%), Gaps = 10/92 (10%)

Query: 26  EKPFKCTECGKGFCQSRTLAVH---KILHLEESPHKCPVC-----SRSFNQRSNLKTHLL 77
           E   +   C + F     L  H   + +H E     C         R F  +  L  H+ 
Sbjct: 1   ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMR 60

Query: 78  THTDIKPYNCAA--CGKVFRRNCDLRRHSLTH 107
            HT  KP+ C    C K + R  +L+ H  +H
Sbjct: 61  RHTGEKPHKCTFEGCRKSYSRLENLKTHLRSH 92

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 64.5 bits (158), Expect = 3e-14
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 5/64 (7%)

Query: 22  IHSKEKPFKCTE--CGKGFCQSRTLAVHKI-LHLEESPHKCPV--CSRSFNQRSNLKTHL 76
            H+ EKP+ C    C K F  +   A H+   H  E P+ C +  C++ +   S+L+ H+
Sbjct: 91  SHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHV 150

Query: 77  LTHT 80
            T  
Sbjct: 151 KTVH 154

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 88.7 bits (221), Expect = 2e-24
 Identities = 17/77 (22%), Positives = 30/77 (38%), Gaps = 4/77 (5%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEES----PHKCPVCSRSFNQRSNLKTHLL 77
           H+ EKP+ C+ C K F Q + L +H   + + +       C  C ++F +R+ +  H  
Sbjct: 9  THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHAD 68

Query: 78 THTDIKPYNCAACGKVF 94
                       G   
Sbjct: 69 NCAGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 67.6 bits (166), Expect = 4e-16
 Identities = 18/69 (26%), Positives = 28/69 (40%), Gaps = 4/69 (5%)

Query: 43  TLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTD----IKPYNCAACGKVFRRNC 98
           +       H  E P+ C  C ++F Q+  L  H   + D       + C+ CGK F R  
Sbjct: 2   SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61

Query: 99  DLRRHSLTH 107
            + RH+   
Sbjct: 62  TMARHADNC 70

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 88.4 bits (220), Expect = 3e-24
 Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 5/77 (6%)

Query: 23 HSKEKPFKCT--ECGKGFCQSRTLAVHK-ILHLEESPHKCP--VCSRSFNQRSNLKTHLL 77
           S      C    CG+ F   + L  HK   H+ +    CP   C +SFN + +LK H+ 
Sbjct: 2  SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61

Query: 78 THTDIKPYNCAACGKVF 94
           H+D + Y C   G   
Sbjct: 62 LHSDTRDYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 59.5 bits (145), Expect = 5e-13
 Identities = 19/62 (30%), Positives = 23/62 (37%), Gaps = 5/62 (8%)

Query: 51  HLEESPHKCPV--CSRSFNQRSNLKTHL-LTHTDIKPYNC--AACGKVFRRNCDLRRHSL 105
               S   C    C R F+ R  L  H    H   K ++C   ACGK F     L+ H  
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61

Query: 106 TH 107
            H
Sbjct: 62  LH 63

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 36.4 bits (85), Expect = 3e-04
 Identities = 4/17 (23%), Positives = 7/17 (41%)

Query: 22 IHSKEKPFKCTECGKGF 38
          +HS  + + C   G   
Sbjct: 62 LHSDTRDYICEFSGPSS 78

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 85.2 bits (212), Expect = 4e-23
 Identities = 26/64 (40%), Positives = 36/64 (56%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTD 81
          +   +KP+KC  C   F     LA HK +H  E P++C +C   FN+ +NLKTH   H+ 
Sbjct: 11 MTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSG 70

Query: 82 IKPY 85
           KPY
Sbjct: 71 EKPY 74

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 73.3 bits (181), Expect = 2e-18
 Identities = 23/67 (34%), Positives = 31/67 (46%)

Query: 41  SRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCDL 100
                 H  +   + P+KC  C  SF  + NL +H   HT  KPY C  CG  F R  +L
Sbjct: 2   GHHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANL 61

Query: 101 RRHSLTH 107
           + H+  H
Sbjct: 62  KTHTRIH 68

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 87.3 bits (217), Expect = 5e-23
 Identities = 26/97 (26%), Positives = 38/97 (39%), Gaps = 11/97 (11%)

Query: 22  IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHK---------CPVCSRSFNQRSNL 72
           I   +       C + F     L  H  +     P +         CP   +SF  +  L
Sbjct: 19  IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78

Query: 73  KTHLLTHTDIKPYNCAA--CGKVFRRNCDLRRHSLTH 107
             H+  HT  KP+ C    CGK+F R+ +L+ H  TH
Sbjct: 79  VNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTH 115

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 87.0 bits (216), Expect = 7e-23
 Identities = 29/99 (29%), Positives = 39/99 (39%), Gaps = 13/99 (13%)

Query: 22  IHSKEKPFK---------CTECGKGFCQSRTLAVHKILHLEESPHKCPV--CSRSFNQRS 70
           +     P +         C   GK F     L  H  +H  E P  CP   C + F +  
Sbjct: 47  MEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSE 106

Query: 71  NLKTHLLTHTDIKPYNCAA--CGKVFRRNCDLRRHSLTH 107
           NLK H  THT  KP+ C    C + F  + D ++H   H
Sbjct: 107 NLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVH 145

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 77.3 bits (191), Expect = 4e-19
 Identities = 28/72 (38%), Positives = 35/72 (48%), Gaps = 4/72 (5%)

Query: 22  IHSKEKPFKCT--ECGKGFCQSRTLAVHKILHLEESPHKCPV--CSRSFNQRSNLKTHLL 77
           +H+ EKPF C    CGK F +S  L +HK  H  E P KC    C R F   S+ K H+ 
Sbjct: 84  VHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMH 143

Query: 78  THTDIKPYNCAA 89
            HT  K    + 
Sbjct: 144 VHTSDKSGPSSG 155

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 61.5 bits (150), Expect = 4e-13
 Identities = 16/84 (19%), Positives = 23/84 (27%), Gaps = 9/84 (10%)

Query: 33  ECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPY------- 85
             G      +     K +   +       C R+F+    L TH+       P        
Sbjct: 2   SSGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCY 61

Query: 86  --NCAACGKVFRRNCDLRRHSLTH 107
              C   GK F+    L  H   H
Sbjct: 62  WEECPREGKSFKAKYKLVNHIRVH 85

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 82.9 bits (206), Expect = 3e-22
 Identities = 28/64 (43%), Positives = 36/64 (56%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTD 81
          IHS EKP+ C ECGK F +S  L  H+ +H  E P+KC  C ++F+Q S L  H   HT 
Sbjct: 8  IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTS 67

Query: 82 IKPY 85
              
Sbjct: 68 GPSS 71

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 38.6 bits (91), Expect = 4e-05
 Identities = 13/36 (36%), Positives = 16/36 (44%)

Query: 72  LKTHLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
                  H+  KPY C  CGK F R+  L +H   H
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVH 37

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 82.5 bits (205), Expect = 5e-22
 Identities = 25/64 (39%), Positives = 34/64 (53%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTD 81
             + + +KC ECGK F  S  L+ H+  H  E P+KC  C ++F QRS+L  H   HT 
Sbjct: 12 QQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTG 71

Query: 82 IKPY 85
            P 
Sbjct: 72 SGPS 75

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 72.9 bits (180), Expect = 2e-18
 Identities = 24/68 (35%), Positives = 31/68 (45%)

Query: 40  QSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCD 99
            S +    +    E   +KC  C +SF+  S+L  H  THT  KPY C  CGK F +   
Sbjct: 2   SSGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSH 61

Query: 100 LRRHSLTH 107
           L  H   H
Sbjct: 62  LIGHHRVH 69

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 50.9 bits (123), Expect = 8e-10
 Identities = 16/37 (43%), Positives = 19/37 (51%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHK 58
           H+ EKP+KC ECGK F Q   L  H  +H    P  
Sbjct: 40 THTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSS 76

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 82.2 bits (204), Expect = 8e-22
 Identities = 24/87 (27%), Positives = 33/87 (37%), Gaps = 2/87 (2%)

Query: 23  HSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC--PVCSRSFNQRSNLKTHLLTHT 80
            +         CGK + +S  L  H   H  E P+ C    C   F +   L  H   HT
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61

Query: 81  DIKPYNCAACGKVFRRNCDLRRHSLTH 107
             +P+ C  C + F R+  L  H   H
Sbjct: 62  GHRPFQCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 65.2 bits (160), Expect = 3e-15
 Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 2/60 (3%)

Query: 22 IHSKEKPFKCT--ECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTH 79
           H+ EKP+ C    CG  F +S  L  H   H    P +C  C R+F++  +L  H+  H
Sbjct: 29 THTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 42.9 bits (102), Expect = 1e-06
 Identities = 11/31 (35%), Positives = 18/31 (58%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHL 52
           H+  +PF+C +C + F +S  LA+H   H 
Sbjct: 59 KHTGHRPFQCQKCDRAFSRSDHLALHMKRHF 89

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 78.3 bits (194), Expect = 2e-20
 Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 3/67 (4%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEES--PHKCPVCSRSFNQRSNLKTHLLT- 78
           HS EKP++C  C   F QS T+ +H +    E+     CP C     ++S+L  HL   
Sbjct: 9  THSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQ 68

Query: 79 HTDIKPY 85
          H+   P 
Sbjct: 69 HSYSGPS 75

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 73.3 bits (181), Expect = 2e-18
 Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 2/63 (3%)

Query: 43  TLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHT--DIKPYNCAACGKVFRRNCDL 100
           +       H  E P++C +C   F Q   +K H+L     ++  ++C  C  V  R  DL
Sbjct: 2   SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61

Query: 101 RRH 103
             H
Sbjct: 62  GVH 64

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 46.7 bits (112), Expect = 3e-08
 Identities = 10/37 (27%), Positives = 17/37 (45%)

Query: 71  NLKTHLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +  +   TH+  KPY C  C   F ++  ++ H L  
Sbjct: 2   SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQK 38

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 77.5 bits (192), Expect = 3e-20
 Identities = 20/69 (28%), Positives = 27/69 (39%)

Query: 20 GYIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTH 79
          G   S   P KC+EC         L +H+ +H  + P KC  CS    Q SNL  H+   
Sbjct: 1  GSSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKF 60

Query: 80 TDIKPYNCA 88
                  +
Sbjct: 61 HGDMSGPSS 69

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 38.2 bits (90), Expect = 5e-05
 Identities = 7/30 (23%), Positives = 10/30 (33%)

Query: 78  THTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           + +   P  C+ C         LR H   H
Sbjct: 3   SGSSGHPEKCSECSYSCSSKAALRIHERIH 32

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 75.3 bits (186), Expect = 3e-19
 Identities = 11/63 (17%), Positives = 21/63 (33%), Gaps = 2/63 (3%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHK--ILHLEESPHKCPVCSRSFNQRSNLKTHLLTH 79
              E  ++C  C + +        H           + CP C + F ++ N+  H+   
Sbjct: 4  TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63

Query: 80 TDI 82
            I
Sbjct: 64 HKI 66

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 69.9 bits (172), Expect = 3e-17
 Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 2/60 (3%)

Query: 51  HLEESPHKCPVCSRSFNQRSNLKTHLLT--HTDIKPYNCAACGKVFRRNCDLRRHSLTHN 108
              E  ++C VCSR +   SN   H +T    ++K Y C  C K F R  ++  H    +
Sbjct: 5   KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIH 64

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 39.5 bits (93), Expect = 2e-05
 Identities = 8/30 (26%), Positives = 12/30 (40%)

Query: 78  THTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           T      Y C  C +V+    +  RH +T 
Sbjct: 4   TKEGEHTYRCKVCSRVYTHISNFCRHYVTS 33

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 76.1 bits (188), Expect = 3e-19
 Identities = 27/89 (30%), Positives = 35/89 (39%), Gaps = 4/89 (4%)

Query: 23  HSKEKPFKCT--ECGKGFCQSRTLAVHKILHLEESPHKC--PVCSRSFNQRSNLKTHLLT 78
             K +   C    C K + +S  L  H   H  E P+KC    C   F +   L  H   
Sbjct: 10  LEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRK 69

Query: 79  HTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           HT  KP+ C  C + F R+  L  H   H
Sbjct: 70  HTGAKPFQCGVCNRSFSRSDHLALHMKRH 98

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 66.9 bits (164), Expect = 1e-15
 Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 2/62 (3%)

Query: 22  IHSKEKPFKCT--ECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTH 79
            H+ EKP+KCT   C   F +S  L  H   H    P +C VC+RSF++  +L  H+  H
Sbjct: 39  THTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRH 98

Query: 80  TD 81
            +
Sbjct: 99  QN 100

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 74.7 bits (184), Expect = 6e-19
 Identities = 15/76 (19%), Positives = 24/76 (31%), Gaps = 4/76 (5%)

Query: 23 HSKEKPFKCTECGKGFCQSRTLAVHKILHLE---ESPHKCPVCSRSFNQRSNLKTHLLT- 78
           S     +C  CG    Q  +L  H+  H E        C  C + F +  ++  H    
Sbjct: 2  SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

Query: 79 HTDIKPYNCAACGKVF 94
          H  +      + G   
Sbjct: 62 HPALLLAPQESSGPSS 77

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 70.1 bits (172), Expect = 3e-17
 Identities = 13/57 (22%), Positives = 23/57 (40%), Gaps = 3/57 (5%)

Query: 54  ESPHKCPVCSRSFNQRSNLKTHLLTHTDI---KPYNCAACGKVFRRNCDLRRHSLTH 107
            S  +C +C  +  Q+++L  H   H +      + C  CGK F +   +  H    
Sbjct: 5   SSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 37.0 bits (86), Expect = 2e-04
 Identities = 7/29 (24%), Positives = 9/29 (31%)

Query: 79  HTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
            +      C  CG   R+   L  H   H
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRKH 30

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 67.3 bits (165), Expect = 5e-16
 Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 4/79 (5%)

Query: 29  FKCT--ECGKGFCQSRTLAVHKILHLEESPHKC--PVCSRSFNQRSNLKTHLLTHTDIKP 84
           + C    CGK F +   L VH+  H ++ P++C    C + F+  S LK H   H     
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61

Query: 85  YNCAACGKVFRRNCDLRRH 103
               +C  V +      +H
Sbjct: 62  KKDDSCSFVGKTWTLYLKH 80

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 54.5 bits (132), Expect = 4e-11
 Identities = 13/56 (23%), Positives = 21/56 (37%), Gaps = 2/56 (3%)

Query: 22 IHSKEKPFKCTE--CGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTH 75
           H+++ P++C    C K F     L  H+ +H      K   CS      +    H
Sbjct: 25 SHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKH 80

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 54.2 bits (131), Expect = 5e-11
 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 4/55 (7%)

Query: 57  HKCPV--CSRSFNQRSNLKTHLLTHTDIKPYNC--AACGKVFRRNCDLRRHSLTH 107
           + C    C ++F + + LK H  +HT   PY C    C K F     L+RH   H
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVH 56

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 65.2 bits (160), Expect = 2e-15
 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)

Query: 27 KPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLL-THT 80
          + F C  C + F +   L  H   H  E P+ C +C+R+F +R  L  H    H+
Sbjct: 1  RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHS 55

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 61.7 bits (151), Expect = 3e-14
 Identities = 20/49 (40%), Positives = 29/49 (59%)

Query: 56  PHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCDLRRHS 104
              C VC+R+F ++ +LK H  +HT+ KPY C  C + F R   L RH+
Sbjct: 2   SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHA 50

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 44.8 bits (107), Expect = 1e-07
 Identities = 9/27 (33%), Positives = 13/27 (48%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHK 48
           H+ EKP+ C  C + F +   L  H 
Sbjct: 24 SHTNEKPYPCGLCNRAFTRRDLLIRHA 50

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 35.9 bits (84), Expect = 3e-04
 Identities = 8/25 (32%), Positives = 13/25 (52%)

Query: 83  KPYNCAACGKVFRRNCDLRRHSLTH 107
           + + C  C + F R   L+RH  +H
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSH 25

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 63.0 bits (154), Expect = 1e-14
 Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 1/48 (2%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVH-KILHLEESPHKCPVCSRSFNQ 68
            S  KP+ C  CGKGF +   L  H K +H  E PHKC V     + 
Sbjct: 6  SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 38.3 bits (90), Expect = 4e-05
 Identities = 11/30 (36%), Positives = 15/30 (50%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRH 103
           +   + +  KPY C +CGK F R   L  H
Sbjct: 2   SSGSSGSVGKPYICQSCGKGFSRPDHLNGH 31

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 61.9 bits (151), Expect = 5e-14
 Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 2/61 (3%)

Query: 22 IHSKEKPFKCT--ECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTH 79
          +  K +P+ C    C + F +S  L  H  +H  + P +C +C R+F++  +L TH+ TH
Sbjct: 13 VVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72

Query: 80 T 80
          T
Sbjct: 73 T 73

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 58.1 bits (141), Expect = 1e-12
 Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 4/69 (5%)

Query: 41  SRTLAVHKILHLEESPHKCPV--CSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNC 98
              L  + +      P+ CPV  C R F++   L  H+  HT  KP+ C  C + F R+ 
Sbjct: 6   MNNLLNYVVPK--MRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSD 63

Query: 99  DLRRHSLTH 107
            L  H  TH
Sbjct: 64  HLTTHIRTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 37.7 bits (88), Expect = 8e-05
 Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 4/44 (9%)

Query: 66  FNQRSNLKTHLLTHTDIKPYNCA--ACGKVFRRNCDLRRHSLTH 107
            +  +NL  +++     +PY C   +C + F R+ +L RH   H
Sbjct: 3   PHPMNNLLNYVVPKM--RPYACPVESCDRRFSRSDELTRHIRIH 44

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 58.2 bits (141), Expect = 1e-12
 Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 4/71 (5%)

Query: 41  SRTLAVHKILHLEESPHKCPV--CSRSFNQRSNLKTHLLTHTDIKPYNCA--ACGKVFRR 96
           S   +  +I       H C    C +++ + S+LK H  THT  KP++C+   C + F R
Sbjct: 2   SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61

Query: 97  NCDLRRHSLTH 107
           + +L RH  TH
Sbjct: 62  SDELSRHRRTH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 47.0 bits (112), Expect = 2e-08
 Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 4/61 (6%)

Query: 23 HSKEKPFKCT--ECGKGFCQSRTLAVHKILHLEESPHKC--PVCSRSFNQRSNLKTHLLT 78
           S+ +   C+   CGK + +S  L  H   H  E P  C    C R F +   L  H  T
Sbjct: 12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRT 71

Query: 79 H 79
          H
Sbjct: 72 H 72

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 58.6 bits (141), Expect = 3e-12
 Identities = 19/87 (21%), Positives = 29/87 (33%), Gaps = 5/87 (5%)

Query: 22  IHSKEKPFKCTECGKGFCQSRTLAVH--KILHLEESPHKCPVC---SRSFNQRSNLKTHL 76
           I +    F+C +C   +     L VH  +  H  +  H+         S  ++ +L    
Sbjct: 13  IFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEME 72

Query: 77  LTHTDIKPYNCAACGKVFRRNCDLRRH 103
                 K   C  CG  F    DL  H
Sbjct: 73  GKEDAQKVLKCMYCGHSFESLQDLSVH 99

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 39.7 bits (92), Expect = 4e-05
 Identities = 10/56 (17%), Positives = 17/56 (30%)

Query: 21  YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHL 76
           Y     +            + R+L   +     +   KC  C  SF    +L  H+
Sbjct: 45  YRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHM 100

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 36.7 bits (84), Expect = 5e-04
 Identities = 7/37 (18%), Positives = 13/37 (35%)

Query: 67  NQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCDLRRH 103
           +  S+ K +    T    + C  C   +    +L  H
Sbjct: 2   SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVH 38

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.0 bits (136), Expect = 5e-12
 Identities = 16/38 (42%), Positives = 19/38 (50%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            + EKPFKC  CGK FC    L  H ++H  E P   
Sbjct: 6  SGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGP 43

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 7e-11
 Identities = 15/45 (33%), Positives = 20/45 (44%)

Query: 45 AVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAA 89
                   E P KC +C +SF  RS L  H + HT  KP   ++
Sbjct: 1  GSSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSS 45

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.9 bits (97), Expect = 3e-06
 Identities = 13/34 (38%), Positives = 17/34 (50%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + T  KP+ C  CGK F     L RHS+ H
Sbjct: 2   SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVH 35

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 56.9 bits (137), Expect = 8e-12
 Identities = 15/77 (19%), Positives = 23/77 (29%), Gaps = 9/77 (11%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVH-KILHLEESPHK--------CPVCSRSFNQRSNL 72
          I   +       C + F     L  H  + H+              CP   +SF  +  L
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78

Query: 73 KTHLLTHTDIKPYNCAA 89
            H+  HT  K    + 
Sbjct: 79 VNHIRVHTGEKSGPSSG 95

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 42.3 bits (99), Expect = 3e-06
 Identities = 14/67 (20%), Positives = 20/67 (29%), Gaps = 9/67 (13%)

Query: 50  LHLEESPHKCPVCSRSFNQRSNLKTHLL-THTDIKPY--------NCAACGKVFRRNCDL 100
           +   +       C R+F+    L TH+   H               C   GK F+    L
Sbjct: 19  IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78

Query: 101 RRHSLTH 107
             H   H
Sbjct: 79  VNHIRVH 85

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 9e-12
 Identities = 15/38 (39%), Positives = 20/38 (52%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            S EKP+KC+ECGK F +   L  H+ +H    P   
Sbjct: 6  SGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 5e-09
 Identities = 11/43 (25%), Positives = 19/43 (44%)

Query: 45 AVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNC 87
                   E P+KC  C ++F++ ++L  H   HT  +P   
Sbjct: 1  GSSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 1e-05
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + +  KPY C+ CGK F R+  L  H   H
Sbjct: 2   SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIH 35

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 9e-12
 Identities = 15/38 (39%), Positives = 20/38 (52%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            + EKP+KC ECGK F     L  H+++H  E P   
Sbjct: 6  SGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 1e-09
 Identities = 15/43 (34%), Positives = 19/43 (44%)

Query: 45 AVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNC 87
                   E P+KC  C ++F   SNL TH + HT  KP   
Sbjct: 1  GSSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 4e-06
 Identities = 13/34 (38%), Positives = 18/34 (52%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + T  KPY C  CGK FR + +L  H + H
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIH 35

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.8 bits (133), Expect = 1e-11
 Identities = 14/38 (36%), Positives = 22/38 (57%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            S EKP+KC +CGKG+ +   L +H+ +H+ E     
Sbjct: 6  SGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 6e-10
 Identities = 12/43 (27%), Positives = 16/43 (37%)

Query: 45 AVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNC 87
                   E P+KC  C + +N+R NL  H   H   K    
Sbjct: 1  GSSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 5e-06
 Identities = 11/34 (32%), Positives = 16/34 (47%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + +  KPY C  CGK + R  +L  H   H
Sbjct: 2   SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVH 35

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.4 bits (132), Expect = 2e-11
 Identities = 15/38 (39%), Positives = 21/38 (55%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            + EKP+KC ECGK F  +  L+ H+ +H  E P   
Sbjct: 6  SGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 3e-06
 Identities = 16/34 (47%), Positives = 18/34 (52%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + T  KPY C  CGKVFR N  L RH   H
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIH 35

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.5 bits (132), Expect = 2e-11
 Identities = 15/38 (39%), Positives = 20/38 (52%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            S EKP+KC ECGKG+ +   L  H+ +H  E     
Sbjct: 6  SGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 9e-07
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + +  KPY C  CGK ++R  DL  H   H
Sbjct: 2   SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVH 35

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.5 bits (132), Expect = 2e-11
 Identities = 14/38 (36%), Positives = 21/38 (55%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            + EKP+KC +CGKG+     L +H+ +H  E P   
Sbjct: 6  SGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 4e-10
 Identities = 12/43 (27%), Positives = 17/43 (39%)

Query: 45 AVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNC 87
                   E P+KC  C + +N + NL  H   HT  +P   
Sbjct: 1  GSSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 3e-05
 Identities = 11/34 (32%), Positives = 15/34 (44%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + T  KPY C  CGK +    +L  H   H
Sbjct: 2   SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVH 35

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.4 bits (132), Expect = 2e-11
 Identities = 16/38 (42%), Positives = 22/38 (57%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            + +KP+KC ECGK F Q+  LA H+ +H  E P   
Sbjct: 6  SGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 2e-09
 Identities = 13/45 (28%), Positives = 19/45 (42%)

Query: 45 AVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAA 89
                   + P+KC  C + F Q S+L  H   HT  KP   ++
Sbjct: 1  GSSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS 45

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 8e-06
 Identities = 15/34 (44%), Positives = 18/34 (52%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + T  KPY C  CGKVF +N  L RH   H
Sbjct: 2   SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIH 35

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.4 bits (132), Expect = 2e-11
 Identities = 17/38 (44%), Positives = 20/38 (52%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            S EKP+KC ECGK F Q+  L  H  +H  E P   
Sbjct: 6  SGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 5e-09
 Identities = 14/43 (32%), Positives = 17/43 (39%)

Query: 45 AVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNC 87
                   E P+KC  C + F Q S+L  H   HT  KP   
Sbjct: 1  GSSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 1e-05
 Identities = 13/34 (38%), Positives = 17/34 (50%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + +  KPY C  CGKVF +N  L  H   H
Sbjct: 2   SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIH 35

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.4 bits (132), Expect = 2e-11
 Identities = 13/38 (34%), Positives = 19/38 (50%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            +  KP+ C ECGK F    +L  H+++H  E P   
Sbjct: 6  SGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 8e-09
 Identities = 12/43 (27%), Positives = 18/43 (41%)

Query: 45 AVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNC 87
                     P+ C  C ++F+  S+L TH + HT  KP   
Sbjct: 1  GSSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 1e-05
 Identities = 12/34 (35%), Positives = 16/34 (47%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + T +KPY C  CGK F     L  H + H
Sbjct: 2   SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIH 35

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.4 bits (132), Expect = 2e-11
 Identities = 16/38 (42%), Positives = 23/38 (60%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            + EKP+KC ECGK F ++  LA H+++H  E P   
Sbjct: 6  SGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 6e-09
 Identities = 14/43 (32%), Positives = 18/43 (41%)

Query: 45 AVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNC 87
                   E P+KC  C + F + S+L  H L HT  KP   
Sbjct: 1  GSSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.5 bits (96), Expect = 5e-06
 Identities = 18/34 (52%), Positives = 20/34 (58%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + T  KPY C  CGKVFRRN  L RH L H
Sbjct: 2   SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIH 35

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 54.1 bits (131), Expect = 2e-11
 Identities = 17/38 (44%), Positives = 21/38 (55%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            + EKP+KC ECGKGF   R L  H ++H  E P   
Sbjct: 6  SGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 49.5 bits (119), Expect = 2e-09
 Identities = 14/45 (31%), Positives = 20/45 (44%)

Query: 45 AVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAA 89
                   E P+KC  C + F  R +L TH + HT  KP   ++
Sbjct: 1  GSSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSS 45

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.0 bits (97), Expect = 3e-06
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + T  KPY C  CGK F    DL  H + H
Sbjct: 2   SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVH 35

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 2e-11
 Identities = 15/38 (39%), Positives = 18/38 (47%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            + EKP+KC  CGK F  S  L  H  +H  E P   
Sbjct: 6  SGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 6e-09
 Identities = 12/45 (26%), Positives = 20/45 (44%)

Query: 45 AVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAA 89
                   E P+KC VC ++F   S+L  H   H+  +P   ++
Sbjct: 1  GSSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS 45

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 5e-05
 Identities = 13/33 (39%), Positives = 16/33 (48%)

Query: 75  HLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
              + T  KPY C  CGK FR +  L +H   H
Sbjct: 3   SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVH 35

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 2e-11
 Identities = 16/38 (42%), Positives = 21/38 (55%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            + +K FKC EC K F QS +L VH+ +H  E P   
Sbjct: 6  SGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 5e-09
 Identities = 12/45 (26%), Positives = 18/45 (40%)

Query: 45 AVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAA 89
                   +   KC  C ++F Q S+L  H   HT  KP   ++
Sbjct: 1  GSSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS 45

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 2e-05
 Identities = 8/34 (23%), Positives = 13/34 (38%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   +    K + C  C K F ++  L  H   H
Sbjct: 2   SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIH 35

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.0 bits (131), Expect = 3e-11
 Identities = 17/38 (44%), Positives = 22/38 (57%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            + EKP+KC ECGK F Q+  LA H+ +H  E P   
Sbjct: 6  SGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 1e-08
 Identities = 14/45 (31%), Positives = 19/45 (42%)

Query: 45 AVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAA 89
                   E P+KC  C + F Q S+L  H   HT  KP   ++
Sbjct: 1  GSSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS 45

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 6e-06
 Identities = 15/34 (44%), Positives = 18/34 (52%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + T  KPY C  CGKVF +N  L RH   H
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIH 35

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 3e-11
 Identities = 16/38 (42%), Positives = 20/38 (52%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            + EKPFKC ECGK + Q   L  H+ +H  E P   
Sbjct: 6  SGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 5e-09
 Identities = 15/43 (34%), Positives = 18/43 (41%)

Query: 45 AVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNC 87
                   E P KC  C +S+NQR +L  H   HT  KP   
Sbjct: 1  GSSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 1e-05
 Identities = 10/34 (29%), Positives = 16/34 (47%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + T  KP+ C  CGK + +   L +H   H
Sbjct: 2   SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVH 35

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 3e-11
 Identities = 16/38 (42%), Positives = 19/38 (50%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
              EKP++C+ECGK F  S  L  H I H  E P   
Sbjct: 6  SGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.1 bits (92), Expect = 1e-05
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   +    KPY C+ CGK F  +  L +H +TH
Sbjct: 2   SSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITH 35

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.0 bits (131), Expect = 3e-11
 Identities = 19/38 (50%), Positives = 21/38 (55%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            S EKPFKC ECGK F Q+  LA H  +H  E P   
Sbjct: 6  SGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 3e-09
 Identities = 14/45 (31%), Positives = 20/45 (44%)

Query: 45 AVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAA 89
                   E P KC  C ++F Q  +L +HL  HT  KP   ++
Sbjct: 1  GSSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSS 45

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 7e-06
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + +  KP+ C  CGK FR+N  L  H   H
Sbjct: 2   SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIH 35

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 3e-11
 Identities = 15/38 (39%), Positives = 21/38 (55%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            +  KP++C ECGK F Q+  LA H+ +H  E P   
Sbjct: 6  SGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 1e-05
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + T  KPY C  CGK F +   L RH   H
Sbjct: 2   SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVH 35

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.6 bits (130), Expect = 3e-11
 Identities = 16/38 (42%), Positives = 21/38 (55%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            + EKP+KC ECGK F Q+  L  H+ +H  E P   
Sbjct: 6  SGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.5 bits (96), Expect = 4e-06
 Identities = 15/34 (44%), Positives = 18/34 (52%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + T  KPY C  CGKVF +N  L RH   H
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIH 35

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 4e-11
 Identities = 15/38 (39%), Positives = 19/38 (50%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            + EKP+ C ECGK F Q   L  H+ +H  E P   
Sbjct: 6  SGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 6e-09
 Identities = 14/43 (32%), Positives = 18/43 (41%)

Query: 45 AVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNC 87
                   E P+ C  C +SF Q+S+L  H   HT  KP   
Sbjct: 1  GSSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 3e-06
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + T  KPY C  CGK F +   L RH   H
Sbjct: 2   SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIH 35

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 4e-11
 Identities = 13/38 (34%), Positives = 19/38 (50%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            + EKP+KC++CGK F     L +H+  H  E     
Sbjct: 6  SGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 5e-09
 Identities = 12/43 (27%), Positives = 17/43 (39%)

Query: 45 AVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNC 87
                   E P+KC  C +SF  +S L+ H   HT  +    
Sbjct: 1  GSSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 3e-06
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + T  KPY C+ CGK F     LR H   H
Sbjct: 2   SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCH 35

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 53.7 bits (130), Expect = 4e-11
 Identities = 15/38 (39%), Positives = 18/38 (47%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            S EKP++C ECGK F     L VH+  H   S    
Sbjct: 6  SGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 44.8 bits (107), Expect = 8e-08
 Identities = 10/43 (23%), Positives = 17/43 (39%)

Query: 45 AVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNC 87
                   E P++C  C ++F  +S L  H  TH  +   + 
Sbjct: 1  GSSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 39.8 bits (94), Expect = 9e-06
 Identities = 12/34 (35%), Positives = 15/34 (44%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + +  KPY C  CGK F     L  H  TH
Sbjct: 2   SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTH 35

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 4e-11
 Identities = 18/38 (47%), Positives = 20/38 (52%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            S E+PFKC ECGKGF +   LA H  LH  E     
Sbjct: 6  SGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.1 bits (92), Expect = 2e-05
 Identities = 10/34 (29%), Positives = 15/34 (44%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + +  +P+ C  CGK F R   L  H   H
Sbjct: 2   SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLH 35

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 4e-11
 Identities = 16/38 (42%), Positives = 21/38 (55%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            + EKP+KC ECGK F Q+  LA H+ +H    P   
Sbjct: 6  SGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 5e-06
 Identities = 14/34 (41%), Positives = 17/34 (50%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + T  KPY C  CGKVF +N  L  H   H
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIH 35

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 53.3 bits (129), Expect = 5e-11
 Identities = 19/38 (50%), Positives = 21/38 (55%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            + EKPFKC ECGKGF +   L VH  LH  E P   
Sbjct: 6  SGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 39.4 bits (93), Expect = 1e-05
 Identities = 12/34 (35%), Positives = 15/34 (44%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + T  KP+ C  CGK F R   L  H   H
Sbjct: 2   SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLH 35

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 5e-11
 Identities = 13/38 (34%), Positives = 18/38 (47%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            + EKP+ C  CGK F  S  L  H  +H +E+    
Sbjct: 6  SGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGP 43

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 5e-09
 Identities = 11/45 (24%), Positives = 18/45 (40%)

Query: 45 AVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAA 89
                   E P+ C VC ++F   ++L  HL  HT       ++
Sbjct: 1  GSSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS 45

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 1e-05
 Identities = 12/33 (36%), Positives = 16/33 (48%)

Query: 75  HLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
              + T  KPY+C  CGK F  +  L +H   H
Sbjct: 3   SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVH 35

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 5e-11
 Identities = 18/38 (47%), Positives = 21/38 (55%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            S EKPFKC ECGK F Q+  L  H+ +H  E P   
Sbjct: 6  SGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 4e-09
 Identities = 14/45 (31%), Positives = 18/45 (40%)

Query: 45 AVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAA 89
                   E P KC  C + F Q S L +H   HT  KP   ++
Sbjct: 1  GSSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSS 45

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 4e-06
 Identities = 11/34 (32%), Positives = 16/34 (47%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + +  KP+ C  CGK F +N  L  H   H
Sbjct: 2   SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVH 35

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 53.3 bits (129), Expect = 5e-11
 Identities = 14/38 (36%), Positives = 21/38 (55%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            + EK +KC ECGK F ++  L+ H+ +H  E P   
Sbjct: 6  SGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 47.1 bits (113), Expect = 1e-08
 Identities = 12/43 (27%), Positives = 16/43 (37%)

Query: 45 AVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNC 87
                   E  +KC  C + F++ S L  H   HT  KP   
Sbjct: 1  GSSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 39.0 bits (92), Expect = 1e-05
 Identities = 14/34 (41%), Positives = 17/34 (50%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + T  K Y C  CGKVF RN  L +H   H
Sbjct: 2   SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIH 35

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 5e-11
 Identities = 16/38 (42%), Positives = 21/38 (55%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            + EKP+KC ECGK F Q+  LA H+ +H    P   
Sbjct: 6  SGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 2e-08
 Identities = 14/43 (32%), Positives = 17/43 (39%)

Query: 45 AVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNC 87
                   E P+KC  C + F Q S+L  H   HT  KP   
Sbjct: 1  GSSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 6e-06
 Identities = 15/34 (44%), Positives = 18/34 (52%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + T  KPY C  CGKVF +N  L RH   H
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVH 35

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 5e-11
 Identities = 17/38 (44%), Positives = 22/38 (57%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            + EKP+KC ECGK F Q+  LA H+ +H  E P   
Sbjct: 6  SGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 3e-08
 Identities = 14/41 (34%), Positives = 18/41 (43%)

Query: 47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNC 87
                 E P+KC  C ++F+Q S L  H   HT  KP   
Sbjct: 3  SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 8e-06
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + T  KPY C  CGK F +   L RH   H
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIH 35

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 5e-11
 Identities = 15/38 (39%), Positives = 18/38 (47%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            S EKP+ C  CGK F  S  L  H+ +H  E P   
Sbjct: 6  SGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 4e-08
 Identities = 11/41 (26%), Positives = 15/41 (36%)

Query: 47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNC 87
                 E P+ C  C ++F   + L  H   HT  KP   
Sbjct: 3  SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 7e-06
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + +  KPY C  CGK F  + +L RH   H
Sbjct: 2   SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIH 35

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 5e-11
 Identities = 16/38 (42%), Positives = 19/38 (50%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            S EKP+ C ECGK F Q   L+ H+  H  E P   
Sbjct: 6  SGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 1e-08
 Identities = 14/42 (33%), Positives = 19/42 (45%)

Query: 46 VHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNC 87
                  E P+ C  C ++F+Q+S L  H  THT  KP   
Sbjct: 2  SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 5e-06
 Identities = 12/34 (35%), Positives = 16/34 (47%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + +  KPY C  CGK F +   L  H  TH
Sbjct: 2   SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTH 35

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 5e-11
 Identities = 14/38 (36%), Positives = 19/38 (50%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            + EKP+KC  C K F    +L VH+ +H  E P   
Sbjct: 6  SGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 1e-09
 Identities = 15/43 (34%), Positives = 18/43 (41%)

Query: 45 AVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNC 87
                   E P+KC VC +SF   S+L  H   HT  KP   
Sbjct: 1  GSSGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 8e-06
 Identities = 12/34 (35%), Positives = 14/34 (41%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + T  KPY C  C K FR    L  H   H
Sbjct: 2   SSGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIH 35

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 5e-11
 Identities = 15/45 (33%), Positives = 23/45 (51%)

Query: 45 AVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAA 89
                 + E  +KC VC + F+Q S+L+TH   HT  KP   ++
Sbjct: 1  GSSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS 45

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 6e-11
 Identities = 15/38 (39%), Positives = 18/38 (47%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
              EK +KC  CGK F QS  L  H+ +H  E P   
Sbjct: 6  SGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 1e-05
 Identities = 10/34 (29%), Positives = 15/34 (44%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   +    K Y C  CGK F ++  L+ H   H
Sbjct: 2   SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVH 35

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 6e-11
 Identities = 13/38 (34%), Positives = 20/38 (52%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            + EKP+KC++CGK F +   L +H+  H  E     
Sbjct: 6  SGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 9e-09
 Identities = 11/45 (24%), Positives = 20/45 (44%)

Query: 45 AVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAA 89
                   E P+KC  C ++F ++S L  H  +HT  +    ++
Sbjct: 1  GSSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPSS 45

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 6e-06
 Identities = 13/34 (38%), Positives = 17/34 (50%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + T  KPY C+ CGK F R   L  H  +H
Sbjct: 2   SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSH 35

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 6e-11
 Identities = 16/38 (42%), Positives = 21/38 (55%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            + EKP+KC ECGK F    +LA+H+  H  E P   
Sbjct: 6  SGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 1e-08
 Identities = 14/43 (32%), Positives = 19/43 (44%)

Query: 45 AVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNC 87
                   E P+KC  C ++F  RS+L  H  TH+  KP   
Sbjct: 1  GSSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.1 bits (92), Expect = 2e-05
 Identities = 14/34 (41%), Positives = 16/34 (47%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + T  KPY C  CGK FR    L  H  TH
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATH 35

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 6e-11
 Identities = 16/38 (42%), Positives = 20/38 (52%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            + E+P KC ECGK F QS  L  H+ +H  E P   
Sbjct: 6  SGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 2e-08
 Identities = 15/45 (33%), Positives = 20/45 (44%)

Query: 45 AVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAA 89
                   E PHKC  C +SF Q ++L  H   HT  KP   ++
Sbjct: 1  GSSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSS 45

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 2e-05
 Identities = 10/34 (29%), Positives = 17/34 (50%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + T  +P+ C  CGK F ++  L +H   H
Sbjct: 2   SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIH 35

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 6e-11
 Identities = 17/38 (44%), Positives = 21/38 (55%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            S EKPF+C ECGK F Q+  L  H+ +H  E P   
Sbjct: 6  SGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 4e-09
 Identities = 13/45 (28%), Positives = 19/45 (42%)

Query: 45 AVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAA 89
                   E P +C  C + F Q S+L +H   HT  KP   ++
Sbjct: 1  GSSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS 45

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 9e-06
 Identities = 11/34 (32%), Positives = 16/34 (47%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + +  KP+ C  CGK F +N  L  H   H
Sbjct: 2   SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVH 35

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 6e-11
 Identities = 15/38 (39%), Positives = 19/38 (50%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            + EKPF+C+EC K F     L VH+  H  E P   
Sbjct: 6  SGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 8e-09
 Identities = 15/45 (33%), Positives = 21/45 (46%)

Query: 45 AVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAA 89
                   E P +C  C ++FN +SNL  H  THT  KP   ++
Sbjct: 1  GSSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS 45

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 2e-05
 Identities = 11/34 (32%), Positives = 16/34 (47%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + T  KP+ C+ C K F    +L  H  TH
Sbjct: 2   SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTH 35

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 7e-11
 Identities = 14/38 (36%), Positives = 18/38 (47%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            + EKP+ C ECGK F     L  H+ +H  E P   
Sbjct: 6  SGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 1e-08
 Identities = 12/43 (27%), Positives = 18/43 (41%)

Query: 47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAA 89
                 E P+ C  C ++F   S L+ H   HT  KP   ++
Sbjct: 3  SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS 45

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 4e-06
 Identities = 13/34 (38%), Positives = 17/34 (50%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + T  KPYNC  CGK F  +  L+ H   H
Sbjct: 2   SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIH 35

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 53.9 bits (129), Expect = 7e-11
 Identities = 15/64 (23%), Positives = 24/64 (37%), Gaps = 7/64 (10%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTD 81
          IH  ++  KC++CG  F +  TL+  K          C  C +   Q + L       + 
Sbjct: 12 IHLGDRSQKCSKCGIIFIRRSTLSRRK-------TPMCEKCRKDSCQEAALNKDEGNESG 64

Query: 82 IKPY 85
           K  
Sbjct: 65 KKTS 68

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 47.0 bits (111), Expect = 3e-08
 Identities = 18/78 (23%), Positives = 27/78 (34%), Gaps = 7/78 (8%)

Query: 41  SRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCDL 100
           S +    + +HL +   KC  C   F +RS L          K   C  C K   +   L
Sbjct: 3   SGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR-------KTPMCEKCRKDSCQEAAL 55

Query: 101 RRHSLTHNLGSATSTSSG 118
            +     +    +  SSG
Sbjct: 56  NKDEGNESGKKTSGPSSG 73

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 52.9 bits (128), Expect = 7e-11
 Identities = 13/38 (34%), Positives = 18/38 (47%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            + +KPF+CT CGK F     L  H+ +H  E     
Sbjct: 6  SGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 39.4 bits (93), Expect = 1e-05
 Identities = 12/34 (35%), Positives = 16/34 (47%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + T  KP+ C  CGK FR   +L  H   H
Sbjct: 2   SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIH 35

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 53.0 bits (128), Expect = 7e-11
 Identities = 14/38 (36%), Positives = 18/38 (47%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            S EK   C ECGK FC    L +H+ +H+ E     
Sbjct: 6  SGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGP 43

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 36.8 bits (86), Expect = 1e-04
 Identities = 10/33 (30%), Positives = 13/33 (39%)

Query: 75  HLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
              + +  K + C  CGK F     LR H   H
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIHQRVH 35

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 8e-11
 Identities = 14/38 (36%), Positives = 21/38 (55%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            + EKP++C+ CGK F +   L VH+ +H  E P   
Sbjct: 6  SGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 9e-09
 Identities = 13/45 (28%), Positives = 21/45 (46%)

Query: 45 AVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAA 89
                   E P++C +C +SF ++S L  H   HT  KP   ++
Sbjct: 1  GSSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSS 45

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 4e-05
 Identities = 12/34 (35%), Positives = 16/34 (47%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + T  KPY C+ CGK F +   L  H   H
Sbjct: 2   SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIH 35

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 9e-11
 Identities = 15/38 (39%), Positives = 20/38 (52%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            + EKP++C ECGK F Q   L  H+ +H  E P   
Sbjct: 6  SGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 5e-09
 Identities = 13/43 (30%), Positives = 19/43 (44%)

Query: 45 AVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNC 87
                   E P++C  C ++F Q++NL  H   HT  KP   
Sbjct: 1  GSSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 1e-05
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + T  KPY C  CGK F +  +L +H   H
Sbjct: 2   SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIH 35

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 52.9 bits (128), Expect = 9e-11
 Identities = 14/38 (36%), Positives = 18/38 (47%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            + EKP++C EC K F     L VH+  H  ES    
Sbjct: 6  SGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 49.4 bits (119), Expect = 2e-09
 Identities = 13/43 (30%), Positives = 19/43 (44%)

Query: 45 AVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNC 87
                   E P++C  C ++FN +SNL  H  THT     + 
Sbjct: 1  GSSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 39.8 bits (94), Expect = 9e-06
 Identities = 12/34 (35%), Positives = 15/34 (44%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + T  KPY C  C K F    +L  H  TH
Sbjct: 2   SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTH 35

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 9e-11
 Identities = 15/38 (39%), Positives = 22/38 (57%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            +  K F+CTECGK F +  TL++H+ +H  E P   
Sbjct: 6  SGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 4e-08
 Identities = 10/43 (23%), Positives = 15/43 (34%)

Query: 45 AVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNC 87
                       +C  C ++F ++S L  H   HT  KP   
Sbjct: 1  GSSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 1e-05
 Identities = 11/34 (32%), Positives = 14/34 (41%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + T  K + C  CGK F R   L  H   H
Sbjct: 2   SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIH 35

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 52.6 bits (127), Expect = 9e-11
 Identities = 14/38 (36%), Positives = 19/38 (50%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            + EKP+ C ECGK F  +  L  H+ +H  E P   
Sbjct: 6  SGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 45.3 bits (108), Expect = 6e-08
 Identities = 12/43 (27%), Positives = 15/43 (34%)

Query: 45 AVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNC 87
                   E P+ C  C +SF   S L  H   H+  KP   
Sbjct: 1  GSSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 40.2 bits (95), Expect = 6e-06
 Identities = 14/34 (41%), Positives = 17/34 (50%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + T  KPYNC  CGK FR    L +H   H
Sbjct: 2   SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVH 35

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 52.5 bits (127), Expect = 9e-11
 Identities = 13/38 (34%), Positives = 16/38 (42%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            +  KP+ C ECGK F     L +H   H  ES    
Sbjct: 6  SGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 45.9 bits (110), Expect = 3e-08
 Identities = 10/43 (23%), Positives = 15/43 (34%)

Query: 45 AVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNC 87
                     P+ C  C ++F  +S L  H  THT     + 
Sbjct: 1  GSSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 40.2 bits (95), Expect = 5e-06
 Identities = 14/34 (41%), Positives = 18/34 (52%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + T +KPY C  CGK FR    L  H+ TH
Sbjct: 2   SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTH 35

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 9e-11
 Identities = 14/38 (36%), Positives = 23/38 (60%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            + E+ ++C+ECGK F Q  TL++H+ +H  E P   
Sbjct: 6  SGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 5e-08
 Identities = 11/41 (26%), Positives = 16/41 (39%)

Query: 47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNC 87
                 E  ++C  C ++F Q+S L  H   H   KP   
Sbjct: 3  SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 2e-05
 Identities = 10/34 (29%), Positives = 15/34 (44%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + T  + Y C+ CGK F +   L  H   H
Sbjct: 2   SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIH 35

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.6 bits (127), Expect = 1e-10
 Identities = 14/38 (36%), Positives = 20/38 (52%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            + EKP+KC ECGK F  + +   H+ LH  + P   
Sbjct: 6  SGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.0 bits (115), Expect = 7e-09
 Identities = 11/45 (24%), Positives = 18/45 (40%)

Query: 45 AVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAA 89
                   E P+KC  C ++F   S+   H   HT  +P   ++
Sbjct: 1  GSSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSS 45

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.9 bits (94), Expect = 9e-06
 Identities = 12/34 (35%), Positives = 15/34 (44%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + T  KPY C  CGK F  N    +H   H
Sbjct: 2   SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLH 35

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 1e-10
 Identities = 14/38 (36%), Positives = 23/38 (60%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            + EKP++C++CGK F +   L VH+ +H  E+P   
Sbjct: 6  SGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.8 bits (112), Expect = 2e-08
 Identities = 12/45 (26%), Positives = 19/45 (42%)

Query: 45 AVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAA 89
                   E P++C  C +SF ++S L  H   HT   P   ++
Sbjct: 1  GSSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS 45

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 2e-05
 Identities = 12/34 (35%), Positives = 16/34 (47%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + T  KPY C+ CGK F +   L  H   H
Sbjct: 2   SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIH 35

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 52.5 bits (127), Expect = 1e-10
 Identities = 13/42 (30%), Positives = 20/42 (47%)

Query: 18 AQGYIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
          + G   + E P++C ECGK F +   L  H+  H  +S    
Sbjct: 2  SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 39.4 bits (93), Expect = 1e-05
 Identities = 14/34 (41%), Positives = 16/34 (47%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + T   PY C  CGKVF R   L  H  TH
Sbjct: 2   SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTH 35

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 52.6 bits (127), Expect = 1e-10
 Identities = 17/38 (44%), Positives = 19/38 (50%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            S EKPFKC ECGKGF  +     H+  H  E P   
Sbjct: 6  SGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGP 43

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 42.2 bits (100), Expect = 1e-06
 Identities = 10/34 (29%), Positives = 15/34 (44%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + +  KP+ C  CGK F  N     H  +H
Sbjct: 2   SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSH 35

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 1e-10
 Identities = 14/38 (36%), Positives = 19/38 (50%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            + EKP++C ECGK F     L  H+ +H  E P   
Sbjct: 6  SGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 1e-09
 Identities = 15/43 (34%), Positives = 19/43 (44%)

Query: 45 AVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNC 87
                   E P++C  C ++F  RSNL TH   HT  KP   
Sbjct: 1  GSSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 6e-06
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + T  KPY CA CGK F    +L  H   H
Sbjct: 2   SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIH 35

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 1e-10
 Identities = 14/38 (36%), Positives = 18/38 (47%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            + EKP++C  C K F Q   LA H+  H  E P   
Sbjct: 6  SGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 6e-09
 Identities = 15/43 (34%), Positives = 22/43 (51%)

Query: 45 AVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNC 87
                   E P++C VCS++F Q+++L  H  THT  KP   
Sbjct: 1  GSSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 8e-06
 Identities = 12/34 (35%), Positives = 16/34 (47%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + T  KPY C  C K F +   L +H  TH
Sbjct: 2   SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTH 35

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 52.5 bits (127), Expect = 1e-10
 Identities = 15/38 (39%), Positives = 21/38 (55%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            + EKP++C ECGK F Q+  L  H+ +H  E P   
Sbjct: 6  SGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 46.0 bits (110), Expect = 3e-08
 Identities = 12/45 (26%), Positives = 21/45 (46%)

Query: 45 AVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAA 89
                   E P++C  C ++F+Q ++L  H   HT  KP   ++
Sbjct: 1  GSSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSS 45

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 37.9 bits (89), Expect = 4e-05
 Identities = 12/34 (35%), Positives = 16/34 (47%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + T  KPY C  CGK F +   L +H   H
Sbjct: 2   SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVH 35

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 52.1 bits (126), Expect = 1e-10
 Identities = 14/38 (36%), Positives = 19/38 (50%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            S E P++C+ECGK F +   L  H+  H  ES    
Sbjct: 4  GSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 37.5 bits (88), Expect = 6e-05
 Identities = 12/30 (40%), Positives = 14/30 (46%)

Query: 78  THTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
             +   PY C+ CGK F R   L  H  TH
Sbjct: 4   GSSGENPYECSECGKAFNRKDQLISHQRTH 33

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 1e-10
 Identities = 14/38 (36%), Positives = 19/38 (50%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            + E PF C+ECGK F     L +H+ +H  E P   
Sbjct: 6  SGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 1e-08
 Identities = 11/41 (26%), Positives = 16/41 (39%)

Query: 47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNC 87
                 E+P  C  C + F  ++NL  H   HT  +P   
Sbjct: 3  SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 6e-06
 Identities = 11/34 (32%), Positives = 16/34 (47%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + T   P+ C+ CGKVF    +L  H   H
Sbjct: 2   SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIH 35

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.2 bits (126), Expect = 1e-10
 Identities = 14/38 (36%), Positives = 18/38 (47%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            + EKP+ C+ECGK F     L +H   H  E P   
Sbjct: 6  SGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.1 bits (92), Expect = 2e-05
 Identities = 12/34 (35%), Positives = 15/34 (44%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   +    KPY C+ CGK F     L  H  TH
Sbjct: 2   SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTH 35

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 2e-10
 Identities = 13/38 (34%), Positives = 23/38 (60%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            + EKP++C+ CGK F   ++L+VH+ +H  + P   
Sbjct: 6  SGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 2e-08
 Identities = 12/43 (27%), Positives = 19/43 (44%)

Query: 45 AVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNC 87
                   E P++C VC ++F+ R +L  H   H+  KP   
Sbjct: 1  GSSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 6e-05
 Identities = 12/33 (36%), Positives = 14/33 (42%)

Query: 75  HLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
              + T  KPY C+ CGK F     L  H   H
Sbjct: 3   SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIH 35

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.2 bits (126), Expect = 2e-10
 Identities = 15/42 (35%), Positives = 20/42 (47%)

Query: 18 AQGYIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
          + G   S +KP++C EC K F Q   L  HK +H  E     
Sbjct: 2  SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 5e-06
 Identities = 10/34 (29%), Positives = 15/34 (44%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + +  KPY C  C K F +   L +H   H
Sbjct: 2   SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVH 35

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 52.2 bits (126), Expect = 2e-10
 Identities = 16/38 (42%), Positives = 18/38 (47%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            S EKPF C+ C K F     L VH+  H EE P   
Sbjct: 4  GSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 36.7 bits (86), Expect = 1e-04
 Identities = 10/30 (33%), Positives = 13/30 (43%)

Query: 78  THTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
             +  KP+ C+ C K F     L  H  TH
Sbjct: 4   GSSGEKPFGCSCCEKAFSSKSYLLVHQQTH 33

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 52.1 bits (126), Expect = 2e-10
 Identities = 11/38 (28%), Positives = 16/38 (42%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            +  KP+ C++C K F     L VH+  H    P   
Sbjct: 6  SGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 39.8 bits (94), Expect = 7e-06
 Identities = 11/34 (32%), Positives = 16/34 (47%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + T +KPY C+ C K F     L  H  +H
Sbjct: 2   SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSH 35

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 52.1 bits (126), Expect = 2e-10
 Identities = 17/38 (44%), Positives = 21/38 (55%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            + EKPF+C ECGK F  S  LA H+ +H  E P   
Sbjct: 6  SGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 39.0 bits (92), Expect = 1e-05
 Identities = 12/34 (35%), Positives = 16/34 (47%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + T  KP+ CA CGK F  +  L  H   H
Sbjct: 2   SSGSSGTGEKPFECAECGKSFSISSQLATHQRIH 35

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.2 bits (126), Expect = 2e-10
 Identities = 15/37 (40%), Positives = 21/37 (56%)

Query: 23 HSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
           + EKP KCTECGK FC    L +H+  H+++     
Sbjct: 7  GTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.1 bits (92), Expect = 1e-05
 Identities = 12/34 (35%), Positives = 14/34 (41%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + T  KP  C  CGK F     L  H  TH
Sbjct: 2   SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTH 35

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.8 bits (125), Expect = 2e-10
 Identities = 15/38 (39%), Positives = 21/38 (55%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            + EKP +C ECGK F  +  L VH+ +H  E+P   
Sbjct: 6  SGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 2e-05
 Identities = 12/34 (35%), Positives = 15/34 (44%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + T  KP+ C  CGK F  N  L  H   H
Sbjct: 2   SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIH 35

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.7 bits (125), Expect = 2e-10
 Identities = 14/38 (36%), Positives = 18/38 (47%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            + EKPF C +CGK F     L  H+ +H  E P   
Sbjct: 6  SGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 1e-08
 Identities = 11/45 (24%), Positives = 16/45 (35%)

Query: 45 AVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAA 89
                   E P  C  C ++F+    L  H   HT  KP   ++
Sbjct: 1  GSSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSS 45

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 1e-05
 Identities = 11/34 (32%), Positives = 17/34 (50%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + T  KP++C  CGK F  +  L +H   H
Sbjct: 2   SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIH 35

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 2e-10
 Identities = 13/38 (34%), Positives = 18/38 (47%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            + E+P+ CT CGK F     L  H+ +H  E P   
Sbjct: 6  SGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 5e-09
 Identities = 15/41 (36%), Positives = 18/41 (43%)

Query: 47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNC 87
                 E P+ C VC ++F  RSNL  H   HT  KP   
Sbjct: 3  SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 1e-05
 Identities = 11/34 (32%), Positives = 16/34 (47%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + T  +PY C  CGK F    +L +H   H
Sbjct: 2   SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIH 35

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.7 bits (125), Expect = 2e-10
 Identities = 12/38 (31%), Positives = 18/38 (47%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            + EKP++C  C K F    +L  H+ +H  E P   
Sbjct: 6  SGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 9e-09
 Identities = 11/43 (25%), Positives = 19/43 (44%)

Query: 45 AVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNC 87
                   E P++C VC ++F+  ++L  H   H+  KP   
Sbjct: 1  GSSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 2e-05
 Identities = 11/34 (32%), Positives = 15/34 (44%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + T  KPY C  C K F  +  L +H   H
Sbjct: 2   SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVH 35

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.8 bits (125), Expect = 2e-10
 Identities = 12/38 (31%), Positives = 20/38 (52%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            + EKP++C +CGK F    +L  H+ +H  + P   
Sbjct: 6  SGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 3e-08
 Identities = 14/43 (32%), Positives = 20/43 (46%)

Query: 45 AVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNC 87
                   E P++C  C ++F+ RS+L TH   HT  KP   
Sbjct: 1  GSSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 3e-05
 Identities = 12/34 (35%), Positives = 14/34 (41%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + T  KPY C  CGK F     L  H   H
Sbjct: 2   SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIH 35

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.7 bits (125), Expect = 2e-10
 Identities = 13/38 (34%), Positives = 22/38 (57%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            + E+ ++C+ECGK F +  TL +H+ +H  E P   
Sbjct: 6  SGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 6e-08
 Identities = 11/45 (24%), Positives = 19/45 (42%)

Query: 45 AVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAA 89
                   E  ++C  C ++F ++S L  H   HT  KP   ++
Sbjct: 1  GSSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS 45

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.2 bits (90), Expect = 3e-05
 Identities = 11/34 (32%), Positives = 15/34 (44%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + T  + Y C+ CGK F R   L  H   H
Sbjct: 2   SSGSSGTGERHYECSECGKAFARKSTLIMHQRIH 35

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 51.8 bits (125), Expect = 2e-10
 Identities = 12/38 (31%), Positives = 19/38 (50%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            + ++P++C ECGK F    +L  H+  H  E P   
Sbjct: 6  SGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 46.0 bits (110), Expect = 4e-08
 Identities = 11/43 (25%), Positives = 19/43 (44%)

Query: 45 AVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNC 87
                   + P++C  C ++F  +S+L  H  +HT  KP   
Sbjct: 1  GSSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 39.1 bits (92), Expect = 1e-05
 Identities = 11/34 (32%), Positives = 16/34 (47%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + T  +PY C  CGK F+    L  H  +H
Sbjct: 2   SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSH 35

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.7 bits (125), Expect = 2e-10
 Identities = 13/38 (34%), Positives = 18/38 (47%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            + E P++C ECGK F +   L  H+  H  E P   
Sbjct: 6  SGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 3e-05
 Identities = 13/34 (38%), Positives = 15/34 (44%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + T   PY C  CGK F R   L  H  TH
Sbjct: 2   SSGSSGTGENPYECHECGKAFSRKYQLISHQRTH 35

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 52.0 bits (124), Expect = 2e-10
 Identities = 15/52 (28%), Positives = 23/52 (44%)

Query: 29 FKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHT 80
          + C ECG    +   L  H   H +  P+ C  C+ SF  + NL  H+ +  
Sbjct: 2  YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKA 53

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 48.2 bits (114), Expect = 8e-09
 Identities = 17/51 (33%), Positives = 27/51 (52%)

Query: 57  HKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           + C  C     + S LK H+ THTD++PY+C  C   F+   +L +H  + 
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSK 52

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 51.4 bits (124), Expect = 3e-10
 Identities = 11/38 (28%), Positives = 18/38 (47%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
              E+  +C++CGK F Q+     H+ +H  E P   
Sbjct: 6  SGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 48.7 bits (117), Expect = 3e-09
 Identities = 13/43 (30%), Positives = 15/43 (34%)

Query: 45 AVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNC 87
                   E  H+C  C + F Q SN   H   HT  KP   
Sbjct: 1  GSSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 38.3 bits (90), Expect = 3e-05
 Identities = 7/34 (20%), Positives = 15/34 (44%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   +    + + C+ CGK F +  +  +H   H
Sbjct: 2   SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIH 35

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 3e-10
 Identities = 13/38 (34%), Positives = 19/38 (50%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            + EKP+ C ECGK F     L  H+ +H ++ P   
Sbjct: 6  SGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 1e-08
 Identities = 14/43 (32%), Positives = 17/43 (39%)

Query: 45 AVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNC 87
                   E P+ C  C ++F  RSNL  H   HT  KP   
Sbjct: 1  GSSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 5e-06
 Identities = 13/34 (38%), Positives = 17/34 (50%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + T  KPY CA CGK F    +L +H   H
Sbjct: 2   SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIH 35

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 3e-10
 Identities = 13/38 (34%), Positives = 16/38 (42%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            S E+P+ C ECGK F +   L  H   H  E     
Sbjct: 6  SGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 1e-05
 Identities = 11/33 (33%), Positives = 15/33 (45%)

Query: 75  HLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
              + +  +PY C  CGK F R+  L  H   H
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRH 35

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 51.0 bits (123), Expect = 3e-10
 Identities = 14/42 (33%), Positives = 22/42 (52%)

Query: 18 AQGYIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
          + G     EK +KC EC   F Q+ +L +H+ +H+ E P   
Sbjct: 2  SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 46.4 bits (111), Expect = 2e-08
 Identities = 12/41 (29%), Positives = 16/41 (39%)

Query: 47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNC 87
               + E   KC  C   F+Q S+L+ H   H   KP   
Sbjct: 3  SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 40.6 bits (96), Expect = 5e-06
 Identities = 8/34 (23%), Positives = 12/34 (35%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   +    K + C  C   F +   LR H   H
Sbjct: 2   SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVH 35

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 4e-10
 Identities = 14/38 (36%), Positives = 19/38 (50%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            + EK + C ECGK F ++  L  H+ LH  E P   
Sbjct: 6  SGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.8 bits (112), Expect = 2e-08
 Identities = 10/45 (22%), Positives = 17/45 (37%)

Query: 45 AVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAA 89
                   E  + C  C +SF++   L  H   H+  KP   ++
Sbjct: 1  GSSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSS 45

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 3e-06
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + T  K YNC  CGK F R   L +H   H
Sbjct: 2   SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLH 35

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 50.6 bits (122), Expect = 6e-10
 Identities = 12/38 (31%), Positives = 18/38 (47%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            +   P+KC++C K F     L VH+ +H  E P   
Sbjct: 6  SGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 45.2 bits (108), Expect = 6e-08
 Identities = 12/41 (29%), Positives = 17/41 (41%)

Query: 47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNC 87
                  +P+KC  C +SF+ +  L  H   HT  KP   
Sbjct: 3  SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 39.1 bits (92), Expect = 1e-05
 Identities = 9/34 (26%), Positives = 13/34 (38%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   +   + PY C+ C K F     L  H   H
Sbjct: 2   SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMH 35

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 50.2 bits (121), Expect = 8e-10
 Identities = 13/40 (32%), Positives = 19/40 (47%)

Query: 47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYN 86
                 E P+KC  C   F Q ++L+ H+L HT   P +
Sbjct: 2  SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSS 41

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 41.4 bits (98), Expect = 2e-06
 Identities = 12/33 (36%), Positives = 14/33 (42%)

Query: 75  HLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
              +    KPY C  CG  F +   LR H L H
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIH 34

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 50.3 bits (121), Expect = 9e-10
 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVH-KILHLEESPHKCP 60
            + +KP++C ECGK F Q+ +L  H +  H  E P    
Sbjct: 6  SGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 43.7 bits (104), Expect = 3e-07
 Identities = 11/46 (23%), Positives = 20/46 (43%), Gaps = 1/46 (2%)

Query: 45 AVHKILHLEESPHKCPVCSRSFNQRSNLKTHL-LTHTDIKPYNCAA 89
                   + P++C  C ++F Q ++L  H    HT  KP   ++
Sbjct: 1  GSSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSS 46

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 39.5 bits (93), Expect = 1e-05
 Identities = 13/30 (43%), Positives = 16/30 (53%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRH 103
           +   + T  KPY C  CGK F +N  L RH
Sbjct: 2   SSGSSGTGKKPYECIECGKAFIQNTSLIRH 31

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 49.9 bits (120), Expect = 1e-09
 Identities = 13/38 (34%), Positives = 17/38 (44%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            S  K  +C ECG+GF     L  H+ +H  E P   
Sbjct: 6  SGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 45.2 bits (108), Expect = 6e-08
 Identities = 12/41 (29%), Positives = 15/41 (36%)

Query: 47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNC 87
                    H+C  C R F  +S+L  H   HT  KP   
Sbjct: 3  SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 38.7 bits (91), Expect = 2e-05
 Identities = 8/34 (23%), Positives = 14/34 (41%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + +  K + C  CG+ F     L +H   H
Sbjct: 2   SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIH 35

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 48.8 bits (117), Expect = 2e-09
 Identities = 13/36 (36%), Positives = 18/36 (50%)

Query: 23 HSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHK 58
             E P+ C +CGK F Q  +LAVH+    +  P  
Sbjct: 6  SGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSS 41

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 42.7 bits (101), Expect = 7e-07
 Identities = 11/35 (31%), Positives = 17/35 (48%)

Query: 51 HLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPY 85
             E+P+ C  C +SF QR +L  H  + +   P 
Sbjct: 6  SGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 48.7 bits (117), Expect = 3e-09
 Identities = 14/36 (38%), Positives = 19/36 (52%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPH 57
              EKP++C +CGK F Q  +L VH  +H    P 
Sbjct: 5  SSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 44.9 bits (107), Expect = 1e-07
 Identities = 11/40 (27%), Positives = 20/40 (50%)

Query: 47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYN 86
                 E P++C  C ++F+Q+ +L  H+  HT   P +
Sbjct: 2  SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSS 41

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 37.2 bits (87), Expect = 6e-05
 Identities = 11/33 (33%), Positives = 13/33 (39%)

Query: 75  HLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
              +    KPY C  CGK F +   L  H   H
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVH 34

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.4 bits (116), Expect = 4e-09
 Identities = 14/37 (37%), Positives = 17/37 (45%)

Query: 23 HSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
           + EKPF+C ECG  F  S +L  H   H    P   
Sbjct: 7  GTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 3e-08
 Identities = 10/41 (24%), Positives = 15/41 (36%)

Query: 47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNC 87
                 E P +C  C  +F+   +L  HL +H    P   
Sbjct: 3  SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 2e-07
 Identities = 11/34 (32%), Positives = 17/34 (50%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   + T  KP+ C  CG  F  +C L +H  +H
Sbjct: 2   SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSH 35

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 47.9 bits (115), Expect = 7e-09
 Identities = 12/39 (30%), Positives = 15/39 (38%)

Query: 47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPY 85
                 E P+ C +C   F     LK+HL  HT   P 
Sbjct: 2  SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 40.9 bits (97), Expect = 2e-06
 Identities = 11/33 (33%), Positives = 13/33 (39%)

Query: 75  HLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
              +    KPY C  CG  FR    L+ H   H
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIH 34

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 46.8 bits (112), Expect = 2e-08
 Identities = 11/38 (28%), Positives = 17/38 (44%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
            +  K + C ECGK F +   L  H+ +H  +S    
Sbjct: 6  SGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 41.0 bits (97), Expect = 3e-06
 Identities = 15/33 (45%), Positives = 16/33 (48%)

Query: 75  HLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
              + TD K YNC  CGK F R   L RH   H
Sbjct: 3   SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIH 35

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 36.8 bits (86), Expect = 1e-04
 Identities = 7/44 (15%), Positives = 14/44 (31%)

Query: 45 AVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCA 88
                  +   + C  C ++F +  +L  H   HT     +  
Sbjct: 1  GSSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG 44

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 46.2 bits (110), Expect = 3e-08
 Identities = 12/37 (32%), Positives = 18/37 (48%)

Query: 23 HSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC 59
           S EKP+ C EC + F  +  L  H+ +H  +S    
Sbjct: 5  SSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 39.6 bits (93), Expect = 9e-06
 Identities = 11/30 (36%), Positives = 15/30 (50%)

Query: 78  THTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
             +  KPY+CA C + F  N  L +H   H
Sbjct: 4   GSSGEKPYSCAECKETFSDNNRLVQHQKMH 33

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 46.0 bits (110), Expect = 3e-08
 Identities = 12/35 (34%), Positives = 20/35 (57%)

Query: 23 HSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPH 57
           S ++ ++C ECGK F Q  +L +H+ +H    P 
Sbjct: 5  SSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 36.4 bits (85), Expect = 2e-04
 Identities = 10/30 (33%), Positives = 13/30 (43%)

Query: 78  THTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
             +  + Y C  CGK FR+   L  H   H
Sbjct: 4   GSSGQRVYECQECGKSFRQKGSLTLHERIH 33

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 46.1 bits (109), Expect = 3e-08
 Identities = 10/38 (26%), Positives = 16/38 (42%)

Query: 53 EESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAAC 90
                C +C + F    +L  H L+H+  KPY+    
Sbjct: 9  TRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 40.3 bits (94), Expect = 7e-06
 Identities = 13/41 (31%), Positives = 15/41 (36%)

Query: 23 HSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCS 63
              K   C  CGK F     L  HK+ H  E P+     S
Sbjct: 7  GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 35.7 bits (82), Expect = 3e-04
 Identities = 12/26 (46%), Positives = 15/26 (57%)

Query: 83  KPYNCAACGKVFRRNCDLRRHSLTHN 108
           K   C  CGK+FR    L RH L+H+
Sbjct: 11  KQVACEICGKIFRDVYHLNRHKLSHS 36

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 44.9 bits (105), Expect = 5e-07
 Identities = 14/81 (17%), Positives = 21/81 (25%), Gaps = 2/81 (2%)

Query: 30  KCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAA 89
           K            +     +     S   CP+C   F+   +LK H+          C  
Sbjct: 48  KTLIHNPQLLDESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTE--HTKVCPV 105

Query: 90  CGKVFRRNCDLRRHSLTHNLG 110
           C K F        H    +  
Sbjct: 106 CKKEFTSTDSALDHVCKKHNI 126

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 43.0 bits (100), Expect = 3e-06
 Identities = 17/74 (22%), Positives = 25/74 (33%), Gaps = 2/74 (2%)

Query: 3   RAQHRDDMALETINLAQGYIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVC 62
              H   +  E+  L +         F C  C   F  S +L  H  +   E    CPVC
Sbjct: 49  TLIHNPQLLDESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQH--IRYTEHTKVCPVC 106

Query: 63  SRSFNQRSNLKTHL 76
            + F    +   H+
Sbjct: 107 KKEFTSTDSALDHV 120

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 37.2 bits (85), Expect = 3e-04
 Identities = 10/78 (12%), Positives = 22/78 (28%), Gaps = 4/78 (5%)

Query: 34  CGKGFCQSRTLAVHKILHLEESPHKC----PVCSRSFNQRSNLKTHLLTHTDIKPYNCAA 89
                        H++   ++   +      + +      S+    LL    I  + C  
Sbjct: 20  IFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLASKAISQFVCPL 79

Query: 90  CGKVFRRNCDLRRHSLTH 107
           C   F  +  L++H    
Sbjct: 80  CLMPFSSSVSLKQHIRYT 97

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 42.7 bits (101), Expect = 7e-07
 Identities = 11/45 (24%), Positives = 18/45 (40%), Gaps = 2/45 (4%)

Query: 47 HKILHLEESPHKC--PVCSRSFNQRSNLKTHLLTHTDIKPYNCAA 89
                 E P  C  P C   F++   L  H  +H+ +KP   ++
Sbjct: 3  SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSS 47

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 40.4 bits (95), Expect = 5e-06
 Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 2/40 (5%)

Query: 22 IHSKEKPFKCTE--CGKGFCQSRTLAVHKILHLEESPHKC 59
            + EKPF CT   CG  F +S  L+ H+  H    P   
Sbjct: 6  SGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGP 45

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 39.6 bits (93), Expect = 1e-05
 Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 2/36 (5%)

Query: 74  THLLTHTDIKPYNC--AACGKVFRRNCDLRRHSLTH 107
           +   + T  KP+ C    CG  F R+ +L RH  +H
Sbjct: 2   SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSH 37

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 43.7 bits (102), Expect = 1e-06
 Identities = 21/96 (21%), Positives = 37/96 (38%), Gaps = 4/96 (4%)

Query: 26  EKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPY 85
           ++ ++C  C            H+ L    +   CP CS  F      + H  +  + K  
Sbjct: 14  KEVYQCRLCNAKLSSLLEQGSHERLCRNAAV--CPYCSLRFFSPELKQEHE-SKCEYKKL 70

Query: 86  NCAACGKVFRRNCDLRRHSLT-HNLGSATSTSSGST 120
            C  C + F+ +  + RH +  HN  +   TS  S+
Sbjct: 71  TCLECMRTFKSSFSIWRHQVEVHNQNNMAPTSGPSS 106

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 42.2 bits (99), Expect = 1e-06
 Identities = 12/35 (34%), Positives = 18/35 (51%)

Query: 23 HSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPH 57
           + E PFKC++C + F Q   L  H+  H  +S  
Sbjct: 7  GAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGP 41

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 35.6 bits (82), Expect = 3e-04
 Identities = 13/35 (37%), Positives = 15/35 (42%)

Query: 47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTD 81
                 E+P KC  C R F QR+ L  H  TH  
Sbjct: 3  SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR 37

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 34.8 bits (80), Expect = 6e-04
 Identities = 9/34 (26%), Positives = 16/34 (47%)

Query: 74  THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +   +     P+ C+ C +VF +   L +H  TH
Sbjct: 2   SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTH 35

>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_V Length = 1275

 Score = 44.1 bits (103), Expect = 5e-06
 Identities = 13/74 (17%), Positives = 20/74 (27%)

Query: 53  EESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTHNLGSA 112
             S       S   ++         T +    Y C  C  V     DL  H  +H L   
Sbjct: 149 PMSTRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASHGLHGN 208

Query: 113 TSTSSGSTTATLLS 126
            + +S      +  
Sbjct: 209 MTLTSSEIQRHITE 222

>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_V Length = 1275

 Score = 37.5 bits (86), Expect = 8e-04
 Identities = 11/120 (9%), Positives = 25/120 (20%), Gaps = 13/120 (10%)

Query: 20  GYIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTH 79
           G                   +                ++C VCS       +L  H+ +H
Sbjct: 144 GSNQKPMSTRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203

Query: 80  TDIKPYNCAACGKVFRRNCDLRRHSLTHNLGSATSTSSGSTTATLLSVSPTSFIVESMVN 139
                            N  L    +  ++    S+        + +        + +  
Sbjct: 204 GLHG-------------NMTLTSSEIQRHITEFISSWQNHPIVQVSADVENKKTAQLLHA 250

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 35.4 bits (82), Expect = 3e-04
 Identities = 11/31 (35%), Positives = 19/31 (61%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHL 52
            +  KPF+C +C + F +S  LA+H+  H+
Sbjct: 5  GSTGIKPFQCPDCDRSFSRSDHLALHRKRHM 35

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 35.4 bits (82), Expect = 4e-04
 Identities = 11/33 (33%), Positives = 14/33 (42%)

Query: 75  HLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
                T IKP+ C  C + F R+  L  H   H
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A Length = 29

 Score = 34.2 bits (79), Expect = 8e-04
 Identities = 10/25 (40%), Positives = 16/25 (64%)

Query: 56 PHKCPVCSRSFNQRSNLKTHLLTHT 80
             C VC+R+F ++ +LK H  +HT
Sbjct: 2  SFVCEVCTRAFARQEHLKRHYRSHT 26

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	144
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.9
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.87
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.85
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.85
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.83
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.83
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.82
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.82
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.82
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.79
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.79
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.79
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.78
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.78
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.77
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.77
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.77
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.76
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.75
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.75
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.74
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.74
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.72
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.71
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.71
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.69
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.69
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.68
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.67
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.67
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.66
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.65
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.65
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.64
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.61
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.6
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.59
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.58
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.57
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.57
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.56
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.56
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.55
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.54
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.54
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.54
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.54
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.53
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.52
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.51
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.51
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.5
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.49
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.49
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.48
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.47
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.47
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.47
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.47
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.45
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.44
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.43
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.41
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.41
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.39
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.39
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.39
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.38
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.37
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.36
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.33
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.3
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.29
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.29
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.27
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.27
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.25
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.25
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.25
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.23
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.21
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.19
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.19
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.19
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.19
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.18
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.18
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.17
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.17
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.17
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.17
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.17
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.17
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.17
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.17
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.17
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.17
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.17
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.16
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.16
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.16
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.16
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.16
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.16
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.16
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.16
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.16
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.16
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.16
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.16
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.16
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.16
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.16
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.16
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.16
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.16
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.16
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.16
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.16
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.16
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.15
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.15
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.15
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.15
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.15
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.15
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.15
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.15
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.15
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.15
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.15
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.15
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.15
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.15
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.15
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.15
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.15
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.15
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.15
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.15
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.15
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.14
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.14
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.14
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.14
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.14
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.14
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.14
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.14
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.14
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.14
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.14
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.14
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.14
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.14
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.14
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.13
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.13
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.13
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.13
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.13
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.13
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.13
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.13
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.13
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.12
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.12
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.12
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.12
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.12
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.12
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.12
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.12
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.12
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.11
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.11
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.11
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.11
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.11
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.11
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.1
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.1
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.1
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.09
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.09
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.09
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.08
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.07
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.06
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.04
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.04
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.03
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.03
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.03
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.02
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.02
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.02
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.02
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.02
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.02
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.02
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.01
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.01
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.01
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.01
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.01
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.01
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.01
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.01
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.01
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.01
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.01
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.01
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.01
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.01
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.0
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.0
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.0
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.0
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.0
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.0
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.0
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.0
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.0
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.0
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.0
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.0
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.0
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.0
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.0
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.99
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.99
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.99
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.99
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.99
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.99
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.99
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.99
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.98
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.98
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.98
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.98
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.98
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.98
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.98
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.97
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.97
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.97
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.97
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.97
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.97
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.97
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.97
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.97
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.97
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.96
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.96
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.96
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.96
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.96
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.96
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.96
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.95
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.95
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.95
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.95
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.95
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.94
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.94
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.94
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.94
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.94
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.94
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.93
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.92
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.92
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.92
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.92
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.91
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.89
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.89
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.89
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.89
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.89
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.89
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.88
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.88
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.88
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.87
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.86
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.85
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.85
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.79
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.78
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.76
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.71
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.7
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.7
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.69
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.68
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.68
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.66
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.65
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.65
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.61
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.59
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.58
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.58
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.56
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.56
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.56
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.55
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.55
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.54
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.54
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.54
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.53
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.52
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.51
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.5
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.5
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.48
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.46
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.45
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.45
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.44
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.43
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.43
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.43
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.39
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.35
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.34
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.34
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.34
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.33
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.32
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.31
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.3
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.29
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.28
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.28
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.26
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.26
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.58
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.24
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.24
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.22
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.22
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.21
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.51
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.19
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.19
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.18
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.48
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.16
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.15
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.13
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.12
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.11
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.11
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.09
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.07
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.07
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.06
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.05
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.28
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.01
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.99
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.23
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.13
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.89
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.74
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.57
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.53
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	97.24
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.81
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.69
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	96.27
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.79
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	94.16
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	92.11
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	90.97
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	89.99
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	89.53
2jvx_A	28	NF-kappa-B essential modulator; CCHC classical zin	87.58
2k5c_A	95	Uncharacterized protein PF0385; structural genomic	86.65
1yuz_A	202	Nigerythrin; rubrythrin, rubredoxin, hemerythrin,	86.56
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	85.36
6rxn_A	46	Rubredoxin; electron transfer(iron-sulfur protein)	85.28
2gmg_A	105	Hypothetical protein PF0610; winged-helix like pro	84.13
2djr_A	76	Zinc finger BED domain-containing protein 2; C2H2	83.61
3pwf_A	170	Rubrerythrin; non heme iron peroxidases, oxidative	81.4
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	81.12
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	80.83
2czr_A	226	TBP-interacting protein; tata-binding protein (TBP	80.43

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.90  E-value=2.3e-24  Score=134.83  Aligned_cols=96  Identities=22%  Similarity=0.364  Sum_probs=90.6

Q ss_pred             ccccccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcchhhhcCh
Q psy6676          18 AQGYIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRN   97 (144)
Q Consensus        18 ~~~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~   97 (144)
                      +...+|.|+++|.|++|++.|.....|..|++.|.+.++|.|..|++.|.....|..|++.|+++++|.|..|++.|...
T Consensus        12 h~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~   91 (133)
T 2lt7_A           12 HYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINY   91 (133)
T ss_dssp             EEEEEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSH
T ss_pred             hceeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCH
Confidence            44578999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhHhhccCCCCC
Q psy6676          98 CDLRRHSLTHNLGSAT  113 (144)
Q Consensus        98 ~~l~~H~~~h~~~~~~  113 (144)
                      ..|..|+++|+.+.+.
T Consensus        92 ~~L~~H~~~hh~~~p~  107 (133)
T 2lt7_A           92 QFMSSHIKSVHSQDPS  107 (133)
T ss_dssp             HHHHHHHHHHTCCCTT
T ss_pred             HHHHHHhHHhcCCCCC
Confidence            9999999999876543

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.87  E-value=5.2e-22  Score=117.18  Aligned_cols=92  Identities=32%  Similarity=0.574  Sum_probs=86.8

Q ss_pred             cCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcchhhhcChHHHHH
Q psy6676          23 HSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCDLRR  102 (144)
Q Consensus        23 h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~  102 (144)
                      +.+.++|.|..|++.|.....|..|++.|.+.++|.|.+|++.|.....|..|++.|.++++|.|..|++.|.....|..
T Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   82 (96)
T 2dmd_A            3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTV   82 (96)
T ss_dssp             CCCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHH
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHH
Confidence            46789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHhhccCCCCCC
Q psy6676         103 HSLTHNLGSATS  114 (144)
Q Consensus       103 H~~~h~~~~~~~  114 (144)
                      |+++|+.+..+.
T Consensus        83 H~~~h~~~~~p~   94 (96)
T 2dmd_A           83 HLRSHTGDSGPS   94 (96)
T ss_dssp             HHTTCCSCCCCC
T ss_pred             HHHHhcCCCCCC
Confidence            999998766544

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.85  E-value=5.3e-21  Score=114.81  Aligned_cols=91  Identities=32%  Similarity=0.685  Sum_probs=85.9

Q ss_pred             cCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcchhhhcChHHHHH
Q psy6676          23 HSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCDLRR  102 (144)
Q Consensus        23 h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~  102 (144)
                      ..+.++|.|..|++.|.....|..|++.|.+.++|.|.+|++.|.....|..|++.|.++++|.|..|++.|.....|..
T Consensus        12 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~   91 (106)
T 2ee8_A           12 SKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAV   91 (106)
T ss_dssp             CCCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHH
T ss_pred             cCCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHH
Confidence            45678999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHhhccCCCCC
Q psy6676         103 HSLTHNLGSAT  113 (144)
Q Consensus       103 H~~~h~~~~~~  113 (144)
                      |+++|+.+.+.
T Consensus        92 H~~~H~~~~~~  102 (106)
T 2ee8_A           92 HKTLHMQTSSP  102 (106)
T ss_dssp             HHHHTTSCCCC
T ss_pred             HHHHhCCCCCC
Confidence            99999876544

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.85  E-value=6e-22  Score=119.76  Aligned_cols=89  Identities=33%  Similarity=0.635  Sum_probs=84.9

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcchhhhcChHHH
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCDL  100 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l  100 (144)
                      ..|.++++|.| .|++.|.....|..|++.|.+.++|.|.+|++.|.....|..|++.|.++++|.|..|++.|.....|
T Consensus         3 ~~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   81 (110)
T 2csh_A            3 SGSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSF   81 (110)
T ss_dssp             CCCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHH
T ss_pred             CCCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHH
Confidence            36789999999 99999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhHhhccCC
Q psy6676         101 RRHSLTHNLG  110 (144)
Q Consensus       101 ~~H~~~h~~~  110 (144)
                      ..|+++|+..
T Consensus        82 ~~H~~~~~~~   91 (110)
T 2csh_A           82 HRHVTSCTKS   91 (110)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHcccc
Confidence            9999998754

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.83  E-value=4.7e-21  Score=111.72  Aligned_cols=86  Identities=36%  Similarity=0.793  Sum_probs=80.4

Q ss_pred             CCCccccc--ccccccCChHHHHHHHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcchhhhcChHHHHH
Q psy6676          25 KEKPFKCT--ECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCDLRR  102 (144)
Q Consensus        25 ~~~~~~C~--~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~  102 (144)
                      |+++|.|+  .|++.|.....|..|++.|.+.++|.|..|++.|.....|..|++.|.++++|.|..|++.|.....|..
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   80 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKR   80 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHH
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHH
Confidence            46899998  5999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHhhccCC
Q psy6676         103 HSLTHNLG  110 (144)
Q Consensus       103 H~~~h~~~  110 (144)
                      |+++|+.+
T Consensus        81 H~~~H~~~   88 (90)
T 1a1h_A           81 HTKIHLRQ   88 (90)
T ss_dssp             HHGGGGC-
T ss_pred             HHHHhccc
Confidence            99999864

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.83  E-value=6e-21  Score=109.36  Aligned_cols=81  Identities=40%  Similarity=0.834  Sum_probs=78.7

Q ss_pred             cccccccccccCChHHHHHHHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcchhhhcChHHHHHhHhhc
Q psy6676          28 PFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH  107 (144)
Q Consensus        28 ~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  107 (144)
                      ||.|+.|++.|.....|..|++.|.+.++|.|..|++.|.....|..|++.|.++++|.|..|++.|.....|..|+++|
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   80 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKH   80 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhh
Confidence            68999999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             c
Q psy6676         108 N  108 (144)
Q Consensus       108 ~  108 (144)
                      +
T Consensus        81 ~   81 (82)
T 2kmk_A           81 T   81 (82)
T ss_dssp             C
T ss_pred             C
Confidence            6

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.82  E-value=3.2e-20  Score=109.20  Aligned_cols=86  Identities=36%  Similarity=0.661  Sum_probs=81.0

Q ss_pred             CCCCcccccccccccCChHHHHHHHHHhCCCCCcccccccccccCchHHHHHHhhcCCC--CCcccCcchhhhcChHHHH
Q psy6676          24 SKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDI--KPYNCAACGKVFRRNCDLR  101 (144)
Q Consensus        24 ~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~--~~~~C~~C~~~f~~~~~l~  101 (144)
                      .+.++|.|..|++.|.....|..|++.|.+.++|.|.+|++.|.....|..|++.|.++  ++|.|..|++.|.....|.
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~   82 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLN   82 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHH
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHH
Confidence            57899999999999999999999999999999999999999999999999999999987  8999999999999999999


Q ss_pred             HhHh-hccC
Q psy6676         102 RHSL-THNL  109 (144)
Q Consensus       102 ~H~~-~h~~  109 (144)
                      .|++ .|..
T Consensus        83 ~H~~~~H~~   91 (95)
T 2yt9_A           83 GHIKQVHSG   91 (95)
T ss_dssp             HHHHHTSCC
T ss_pred             HHHHHhcCC
Confidence            9997 4543

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.82  E-value=9.5e-21  Score=115.32  Aligned_cols=93  Identities=19%  Similarity=0.328  Sum_probs=84.0

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHH--hCCCCCcc-cccccccc--cCchHHHHHHhhcCCCCCcccCcchhhhc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKIL--HLEESPHK-CPVCSRSF--NQRSNLKTHLLTHTDIKPYNCAACGKVFR   95 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~--~~~~~~~~-C~~C~~~~--~~~~~l~~h~~~h~~~~~~~C~~C~~~f~   95 (144)
                      .+|.++++|.|..|++.|.....|..|++.  +.+.+++. |.+|++.|  .....|..|++.|.++++|.|..|++.|.
T Consensus        12 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~   91 (115)
T 2dmi_A           12 SIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFE   91 (115)
T ss_dssp             CCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCSSSCCBCS
T ss_pred             eeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceECCCCCCccC
Confidence            688999999999999999999999999998  66666554 99999998  88999999999999999999999999999


Q ss_pred             ChHHHHHhHhhccCCCCC
Q psy6676          96 RNCDLRRHSLTHNLGSAT  113 (144)
Q Consensus        96 ~~~~l~~H~~~h~~~~~~  113 (144)
                      ....|..|+++|+.....
T Consensus        92 ~~~~L~~H~~~hh~~~~~  109 (115)
T 2dmi_A           92 SLQDLSVHMIKTKHYQKV  109 (115)
T ss_dssp             SHHHHHHHHHHTTTTTCS
T ss_pred             CHHHHHHHHHHhCCcccC
Confidence            999999999998765443

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.82  E-value=2.1e-20  Score=112.44  Aligned_cols=90  Identities=20%  Similarity=0.409  Sum_probs=82.0

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcchhhhcChHHH
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCDL  100 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l  100 (144)
                      .+|.++++|.|.+|++.|.....|..|++.|.  ++|.|.+|++.|.....|..|++ |.++++|.|..|++.|.....|
T Consensus         9 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~--~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L   85 (107)
T 1wjp_A            9 SPVENKEVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSI   85 (107)
T ss_dssp             CCCCCCCCCBCTTTCCBCSSHHHHHHHHHHHH--HSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHH
T ss_pred             cccCCCcCeECCCCCCccCCHHHHHHHHHHCC--CCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHH
Confidence            57889999999999999999999999999984  68999999999999999999996 9999999999999999999999


Q ss_pred             HHhHh-hccCCCCC
Q psy6676         101 RRHSL-THNLGSAT  113 (144)
Q Consensus       101 ~~H~~-~h~~~~~~  113 (144)
                      ..|++ +|....+.
T Consensus        86 ~~H~~~~H~~~~~~   99 (107)
T 1wjp_A           86 WRHQVEVHNQNNMA   99 (107)
T ss_dssp             HHHHHHTSCCCCCC
T ss_pred             HHHHHHHcCCCCCC
Confidence            99998 56544433

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.79  E-value=2e-19  Score=110.49  Aligned_cols=90  Identities=33%  Similarity=0.748  Sum_probs=75.4

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHH---hCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcchhhhcCh
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKIL---HLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRN   97 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~---~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~   97 (144)
                      .+|.+.++|.|+.|++.|.....|..|+..   +.+.++|.|.+|++.|.....|..|++.|.++++|.|..|++.|...
T Consensus        28 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~  107 (124)
T 2dlq_A           28 RKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQK  107 (124)
T ss_dssp             HHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHSSSCSEECSSSCCEESSH
T ss_pred             HhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCccCCCccchhCCH
Confidence            567778888888898888888888888875   46677888888988888888888898888888889998899999988


Q ss_pred             HHHHHhHhhccCC
Q psy6676          98 CDLRRHSLTHNLG  110 (144)
Q Consensus        98 ~~l~~H~~~h~~~  110 (144)
                      ..|..|++..|.+
T Consensus       108 ~~l~~H~~~~H~~  120 (124)
T 2dlq_A          108 KDLQSHMIKLHSG  120 (124)
T ss_dssp             HHHHHHHHHTSSC
T ss_pred             HHHHHHHHHHCCC
Confidence            8899998765543

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.79  E-value=4.7e-20  Score=121.38  Aligned_cols=87  Identities=48%  Similarity=0.878  Sum_probs=43.4

Q ss_pred             cCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcchhhhcChHHHHH
Q psy6676          23 HSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCDLRR  102 (144)
Q Consensus        23 h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~  102 (144)
                      |.+.++|.|+.|++.|.....|..|++.|.+.++|.|.+|++.|.....|..|++.|.++++|.|..|++.|.....|..
T Consensus       100 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~  179 (190)
T 2i13_A          100 HTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNV  179 (190)
T ss_dssp             HHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHH
T ss_pred             cCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECCCCCCccCCHHHHHH
Confidence            34444455555555555555555555555444555555555555555555555555555555555555555555555555


Q ss_pred             hHhhccC
Q psy6676         103 HSLTHNL  109 (144)
Q Consensus       103 H~~~h~~  109 (144)
                      |+++|+.
T Consensus       180 H~~~H~~  186 (190)
T 2i13_A          180 HQRTHTG  186 (190)
T ss_dssp             HHTTC--
T ss_pred             HHHhcCC
Confidence            5555443

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.79  E-value=7.7e-20  Score=111.67  Aligned_cols=86  Identities=34%  Similarity=0.724  Sum_probs=47.3

Q ss_pred             CCCcccccc--cccccCChHHHHHHHHHhCCCCCcccc--cccccccCchHHHHHHhhcCCCCCcccCcchhhhcChHHH
Q psy6676          25 KEKPFKCTE--CGKGFCQSRTLAVHKILHLEESPHKCP--VCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCDL  100 (144)
Q Consensus        25 ~~~~~~C~~--C~~~f~~~~~l~~h~~~~~~~~~~~C~--~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l  100 (144)
                      ++++|.|.+  |++.|.....|..|++.|.+.++|.|.  .|++.|.....|..|++.|.++++|.|..|++.|.....|
T Consensus         3 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   82 (119)
T 2jp9_A            3 EKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHL   82 (119)
T ss_dssp             SSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHH
T ss_pred             CCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHH
Confidence            445555554  555555555555555555555555555  4555555555555555555555555555555555555555


Q ss_pred             HHhHhhccCC
Q psy6676         101 RRHSLTHNLG  110 (144)
Q Consensus       101 ~~H~~~h~~~  110 (144)
                      ..|+++|+..
T Consensus        83 ~~H~~~h~~~   92 (119)
T 2jp9_A           83 KTHTRTHTGE   92 (119)
T ss_dssp             HHHHHHHHTC
T ss_pred             HHHHHHhcCC
Confidence            5555555443

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.78  E-value=3.8e-19  Score=108.55  Aligned_cols=87  Identities=39%  Similarity=0.778  Sum_probs=83.4

Q ss_pred             cccCCCCccccc--ccccccCChHHHHHHHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCccc--CcchhhhcC
Q psy6676          21 YIHSKEKPFKCT--ECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNC--AACGKVFRR   96 (144)
Q Consensus        21 ~~h~~~~~~~C~--~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C--~~C~~~f~~   96 (144)
                      .+|.+.++|.|+  .|++.|.....|..|++.|.+.++|.|.+|++.|.....|..|++.|.++++|.|  ..|++.|.+
T Consensus        29 ~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~  108 (119)
T 2jp9_A           29 RKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFAR  108 (119)
T ss_dssp             HHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECCSTTCCCEESS
T ss_pred             HhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHHHHHHHHhcCCCCeeCCCCCCccccCC
Confidence            578889999999  7999999999999999999999999999999999999999999999999999999  799999999


Q ss_pred             hHHHHHhHhhc
Q psy6676          97 NCDLRRHSLTH  107 (144)
Q Consensus        97 ~~~l~~H~~~h  107 (144)
                      ...|..|+++|
T Consensus       109 ~~~L~~H~~~H  119 (119)
T 2jp9_A          109 SDELVRHHNMH  119 (119)
T ss_dssp             HHHHHHHHHTC
T ss_pred             HHHHHHHHhcC
Confidence            99999999876

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.78  E-value=8e-19  Score=104.06  Aligned_cols=85  Identities=32%  Similarity=0.606  Sum_probs=80.4

Q ss_pred             CCCCcccccc--cccccCChHHHHHHHHHhCCCCCcccc--cccccccCchHHHHHHhhcCCCCCcccCcchhhhcChHH
Q psy6676          24 SKEKPFKCTE--CGKGFCQSRTLAVHKILHLEESPHKCP--VCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCD   99 (144)
Q Consensus        24 ~~~~~~~C~~--C~~~f~~~~~l~~h~~~~~~~~~~~C~--~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~   99 (144)
                      ...++|.|..  |++.|.....|..|++.|.+.++|.|.  .|++.|.....|..|++.|.++++|.|..|++.|.....
T Consensus        11 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   90 (100)
T 2ebt_A           11 EKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDH   90 (100)
T ss_dssp             CSCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHH
T ss_pred             ccCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHH
Confidence            3567899997  999999999999999999999999996  699999999999999999999999999999999999999


Q ss_pred             HHHhHhhcc
Q psy6676         100 LRRHSLTHN  108 (144)
Q Consensus       100 l~~H~~~h~  108 (144)
                      |..|+++|+
T Consensus        91 l~~H~~~H~   99 (100)
T 2ebt_A           91 LALHMKRHQ   99 (100)
T ss_dssp             HHHHHHHHC
T ss_pred             HHHHHHHhC
Confidence            999999986

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.77  E-value=1.3e-18  Score=106.88  Aligned_cols=89  Identities=29%  Similarity=0.600  Sum_probs=83.2

Q ss_pred             CCCCcccccccccccCChHHHHHHHHHhCCCCCcccccccccccCchHHHHHHhh---cCCCCCcccCcchhhhcChHHH
Q psy6676          24 SKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLT---HTDIKPYNCAACGKVFRRNCDL  100 (144)
Q Consensus        24 ~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~---h~~~~~~~C~~C~~~f~~~~~l  100 (144)
                      .+.++|.|+.|++.|.....|..|++.|.+.++|.|..|++.|.....|..|+..   +.++++|.|..|++.|.....|
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l   82 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMEL   82 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHH
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHH
Confidence            5789999999999999999999999999999999999999999999999999985   5788999999999999999999


Q ss_pred             HHhHhhccCCCC
Q psy6676         101 RRHSLTHNLGSA  112 (144)
Q Consensus       101 ~~H~~~h~~~~~  112 (144)
                      ..|+++|+...+
T Consensus        83 ~~H~~~h~~~~~   94 (124)
T 2dlq_A           83 RLHMVSHTGEMP   94 (124)
T ss_dssp             HHHHHHHSSSCS
T ss_pred             HHHHHHcCCCCC
Confidence            999999986543

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.77  E-value=3e-19  Score=109.91  Aligned_cols=90  Identities=37%  Similarity=0.759  Sum_probs=74.4

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCccccc--ccccccCchHHHHHHhhcCCCCCcccC--cchhhhcC
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPV--CSRSFNQRSNLKTHLLTHTDIKPYNCA--ACGKVFRR   96 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~--C~~~~~~~~~l~~h~~~h~~~~~~~C~--~C~~~f~~   96 (144)
                      .+| +.++|.|..|++.|.....|..|++.|.+.++|.|.+  |++.|.....|..|++.|.++++|.|.  .|++.|.+
T Consensus        28 ~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~  106 (124)
T 1ubd_C           28 HTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQ  106 (124)
T ss_dssp             GGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHHHHHHHCCCCCCCCSTTCCCCCSS
T ss_pred             HHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCceECCCCCCCCccCC
Confidence            456 6788888888888888888888888888888888875  888888888888888888888888885  48888888


Q ss_pred             hHHHHHhHhhccCCC
Q psy6676          97 NCDLRRHSLTHNLGS  111 (144)
Q Consensus        97 ~~~l~~H~~~h~~~~  111 (144)
                      ...|..|+++|+.+.
T Consensus       107 ~~~L~~H~~~H~~~k  121 (124)
T 1ubd_C          107 STNLKSHILTHAKAK  121 (124)
T ss_dssp             TTTTHHHHHHHC---
T ss_pred             HHHHHHHHHHHcccc
Confidence            888888888887653

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.77  E-value=5.1e-19  Score=102.77  Aligned_cols=84  Identities=30%  Similarity=0.617  Sum_probs=79.1

Q ss_pred             CCCcccccc--cccccCChHHHHHHHHHhCCCCCcccc--cccccccCchHHHHHHhhcCCCCCcccCcchhhhcChHHH
Q psy6676          25 KEKPFKCTE--CGKGFCQSRTLAVHKILHLEESPHKCP--VCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCDL  100 (144)
Q Consensus        25 ~~~~~~C~~--C~~~f~~~~~l~~h~~~~~~~~~~~C~--~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l  100 (144)
                      +.++|.|+.  |++.|.....|..|++.|.+.++|.|.  .|++.|.....|..|++.|.++++|.|..|++.|.....|
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   81 (89)
T 2wbs_A            2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHL   81 (89)
T ss_dssp             -CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHH
T ss_pred             CCCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHH
Confidence            357899999  999999999999999999999999997  5999999999999999999999999999999999999999


Q ss_pred             HHhHhhcc
Q psy6676         101 RRHSLTHN  108 (144)
Q Consensus       101 ~~H~~~h~  108 (144)
                      ..|+++|.
T Consensus        82 ~~H~~~H~   89 (89)
T 2wbs_A           82 ALHMKRHF   89 (89)
T ss_dssp             HHHGGGGC
T ss_pred             HHHHHhhC
Confidence            99999873

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.76  E-value=8.3e-19  Score=111.85  Aligned_cols=84  Identities=33%  Similarity=0.641  Sum_probs=66.5

Q ss_pred             ccccccccccCChHHHHHHHHHhCCCCCccccc--ccccccCchHHHHHHhhcCCCCCcccCc--chhhhcChHHHHHhH
Q psy6676          29 FKCTECGKGFCQSRTLAVHKILHLEESPHKCPV--CSRSFNQRSNLKTHLLTHTDIKPYNCAA--CGKVFRRNCDLRRHS  104 (144)
Q Consensus        29 ~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~--C~~~~~~~~~l~~h~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~  104 (144)
                      |.|+.|++.|.....|..|++.|.+.++|.|.+  |++.|.....|..|++.|.++++|.|..  |++.|.....|..|+
T Consensus        63 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~  142 (155)
T 2rpc_A           63 EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHM  142 (155)
T ss_dssp             TTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSS
T ss_pred             cCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHH
Confidence            678888888888888888888887777888877  8888888888888888888888888876  888888888888888


Q ss_pred             hhccCCCC
Q psy6676         105 LTHNLGSA  112 (144)
Q Consensus       105 ~~h~~~~~  112 (144)
                      ++|+.+.+
T Consensus       143 ~~H~~~k~  150 (155)
T 2rpc_A          143 HVHTSDKS  150 (155)
T ss_dssp             TTTTSCCC
T ss_pred             HHhcCCCC
Confidence            87775543

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.75  E-value=6.4e-19  Score=115.95  Aligned_cols=87  Identities=47%  Similarity=0.896  Sum_probs=43.8

Q ss_pred             cCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcchhhhcChHHHHH
Q psy6676          23 HSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCDLRR  102 (144)
Q Consensus        23 h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~  102 (144)
                      |.+.++|.|+.|++.|.....|..|++.|.+.++|.|..|++.|.....|..|++.|.++++|.|..|++.|.....|..
T Consensus        72 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~  151 (190)
T 2i13_A           72 HTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHT  151 (190)
T ss_dssp             HHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHH
T ss_pred             cCCCCCccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHH
Confidence            33444444444444444444444444444444445555555555555555555555555555555555555555555555


Q ss_pred             hHhhccC
Q psy6676         103 HSLTHNL  109 (144)
Q Consensus       103 H~~~h~~  109 (144)
                      |+++|+.
T Consensus       152 H~~~H~~  158 (190)
T 2i13_A          152 HQRTHTG  158 (190)
T ss_dssp             HHHHHHC
T ss_pred             HHHhcCC
Confidence            5555543

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.75  E-value=1.7e-18  Score=110.25  Aligned_cols=88  Identities=36%  Similarity=0.645  Sum_probs=53.4

Q ss_pred             cccCCCCcccccc--cccccCChHHHHHHHHHhCCCCCccccc--ccccccCchHHHHHH-hhcCCCCCcccCc--chhh
Q psy6676          21 YIHSKEKPFKCTE--CGKGFCQSRTLAVHKILHLEESPHKCPV--CSRSFNQRSNLKTHL-LTHTDIKPYNCAA--CGKV   93 (144)
Q Consensus        21 ~~h~~~~~~~C~~--C~~~f~~~~~l~~h~~~~~~~~~~~C~~--C~~~~~~~~~l~~h~-~~h~~~~~~~C~~--C~~~   93 (144)
                      .+|.+.++|.|+.  |++.|.....|..|++.|.+.++|.|.+  |++.|.....|..|+ +.|.++++|.|..  |++.
T Consensus        60 ~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~  139 (155)
T 2gli_A           60 RRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKR  139 (155)
T ss_dssp             HHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCE
T ss_pred             HhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccc
Confidence            3455556666653  6666666666666666666666666665  666666666666665 5566666666655  6666


Q ss_pred             hcChHHHHHhHhhcc
Q psy6676          94 FRRNCDLRRHSLTHN  108 (144)
Q Consensus        94 f~~~~~l~~H~~~h~  108 (144)
                      |.+...|..|+++|+
T Consensus       140 f~~~~~L~~H~~~hh  154 (155)
T 2gli_A          140 YTDPSSLRKHVKTVH  154 (155)
T ss_dssp             ESSHHHHHHHHHHSC
T ss_pred             cCCHHHHHHHHHhhc
Confidence            666666666666554

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.74  E-value=3.1e-19  Score=103.70  Aligned_cols=83  Identities=25%  Similarity=0.450  Sum_probs=78.1

Q ss_pred             CCcccccccccccCChHHHHHHHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcchhhhcChHHHHHhHh
Q psy6676          26 EKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCDLRRHSL  105 (144)
Q Consensus        26 ~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  105 (144)
                      ++||.|+.|++.|.....|..|++.|.+.++|.|..|++.|.....|..|++.|++ .+|.|..|++.|.....|..|++
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H~~   79 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENEVA   79 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhHHHHH
Confidence            47899999999999999999999999999999999999999999999999998885 88999999999999999999998


Q ss_pred             hccC
Q psy6676         106 THNL  109 (144)
Q Consensus       106 ~h~~  109 (144)
                      .++.
T Consensus        80 ~~h~   83 (88)
T 1llm_C           80 RLKK   83 (88)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7653

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.74  E-value=1.4e-18  Score=93.82  Aligned_cols=56  Identities=32%  Similarity=0.730  Sum_probs=33.6

Q ss_pred             CCCcccccccccccCchHHHHHHhhcCCCCCcccCcchhhhcChHHHHHhHhhccC
Q psy6676          54 ESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTHNL  109 (144)
Q Consensus        54 ~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  109 (144)
                      ++||.|.+|++.|.....|..|++.|+++++|.|..||+.|.....|..|+++|.+
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htg   57 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQN   57 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSC
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCC
Confidence            34556666666666666666666666666666666666666666666666666554

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.72  E-value=1.3e-17  Score=102.53  Aligned_cols=89  Identities=31%  Similarity=0.600  Sum_probs=80.4

Q ss_pred             CCCccccc--ccccccCChHHHHHHHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCc--chhhhcChHHH
Q psy6676          25 KEKPFKCT--ECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAA--CGKVFRRNCDL  100 (144)
Q Consensus        25 ~~~~~~C~--~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~--C~~~f~~~~~l  100 (144)
                      +.++|.|+  .|++.|.+...|..|++.| +.++|.|..|++.|.....|..|++.|.++++|.|..  |++.|.....|
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l   80 (124)
T 1ubd_C            2 EPRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNL   80 (124)
T ss_dssp             ---CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHH
T ss_pred             CCCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHH
Confidence            35789999  8999999999999999998 7889999999999999999999999999999999986  99999999999


Q ss_pred             HHhHhhccCCCCCC
Q psy6676         101 RRHSLTHNLGSATS  114 (144)
Q Consensus       101 ~~H~~~h~~~~~~~  114 (144)
                      ..|+++|+...+..
T Consensus        81 ~~H~~~h~~~~~~~   94 (124)
T 1ubd_C           81 RTHVRIHTGDRPYV   94 (124)
T ss_dssp             HHHHHHHHCCCCCC
T ss_pred             HHHHHHhCCCCceE
Confidence            99999998765443

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.71  E-value=8.5e-18  Score=96.62  Aligned_cols=78  Identities=31%  Similarity=0.616  Sum_probs=74.6

Q ss_pred             cccc--cccccccCChHHHHHHHHHhCCCCCccccc--ccccccCchHHHHHHhhcCCCCCcccCc---chhhhcChHHH
Q psy6676          28 PFKC--TECGKGFCQSRTLAVHKILHLEESPHKCPV--CSRSFNQRSNLKTHLLTHTDIKPYNCAA---CGKVFRRNCDL  100 (144)
Q Consensus        28 ~~~C--~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~--C~~~~~~~~~l~~h~~~h~~~~~~~C~~---C~~~f~~~~~l  100 (144)
                      ||.|  +.|++.|.....|..|++.|.+.++|.|..  |++.|.....|..|++.|.+   |.|..   |++.|.....|
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l   77 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLY   77 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHH
Confidence            6889  889999999999999999999999999988  99999999999999999987   99999   99999999999


Q ss_pred             HHhHhhcc
Q psy6676         101 RRHSLTHN  108 (144)
Q Consensus       101 ~~H~~~h~  108 (144)
                      ..|+++||
T Consensus        78 ~~H~~~hh   85 (85)
T 2j7j_A           78 LKHVAECH   85 (85)
T ss_dssp             HHHHHHCC
T ss_pred             HHHHHhcC
Confidence            99999886

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.71  E-value=9.8e-18  Score=90.44  Aligned_cols=58  Identities=34%  Similarity=0.763  Sum_probs=55.6

Q ss_pred             CCcccccccccccCChHHHHHHHHHhCCCCCcccccccccccCchHHHHHHhhcCCCC
Q psy6676          26 EKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIK   83 (144)
Q Consensus        26 ~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~   83 (144)
                      ++||.|.+|++.|.....|..|++.|.+.++|.|.+|++.|.....|..|+++|+++.
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            6899999999999999999999999999999999999999999999999999999864

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.69  E-value=4e-17  Score=107.29  Aligned_cols=89  Identities=30%  Similarity=0.622  Sum_probs=62.1

Q ss_pred             cccCCCCccccc--ccccccCChHHHHHHH-HHh-CCCCCccc--ccccccccCchHHHHHHhhcCCCCCcccCc--chh
Q psy6676          21 YIHSKEKPFKCT--ECGKGFCQSRTLAVHK-ILH-LEESPHKC--PVCSRSFNQRSNLKTHLLTHTDIKPYNCAA--CGK   92 (144)
Q Consensus        21 ~~h~~~~~~~C~--~C~~~f~~~~~l~~h~-~~~-~~~~~~~C--~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~--C~~   92 (144)
                      .+|.+.++|.|.  .|++.|.+...|..|+ ..| .+.++|.|  ..|++.|.....|..|++.|+++++|.|..  |++
T Consensus        65 ~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k  144 (190)
T 1tf6_A           65 LTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDK  144 (190)
T ss_dssp             TTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCC
T ss_pred             HHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCc
Confidence            456666777777  6777777777777776 444 24556777  667777777777777777777777777766  777


Q ss_pred             hhcChHHHHHhHhhccC
Q psy6676          93 VFRRNCDLRRHSLTHNL  109 (144)
Q Consensus        93 ~f~~~~~l~~H~~~h~~  109 (144)
                      .|.+...|..|+++|+.
T Consensus       145 ~F~~~~~L~~H~~~H~~  161 (190)
T 1tf6_A          145 RFSLPSRLKRHEKVHAG  161 (190)
T ss_dssp             BCSSHHHHHHHHTSSCS
T ss_pred             hhcCHHHHHHHHHHhCC
Confidence            77777777777777664

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.69  E-value=2.4e-17  Score=93.66  Aligned_cols=73  Identities=32%  Similarity=0.631  Sum_probs=68.4

Q ss_pred             cCCCCcccccc--cccccCChHHHHHHHH-HhCCCCCccccc--ccccccCchHHHHHHhhcCCCCCcccCcchhhhc
Q psy6676          23 HSKEKPFKCTE--CGKGFCQSRTLAVHKI-LHLEESPHKCPV--CSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFR   95 (144)
Q Consensus        23 h~~~~~~~C~~--C~~~f~~~~~l~~h~~-~~~~~~~~~C~~--C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~   95 (144)
                      .++.++|.|..  |++.|.....|..|++ .|.+.++|.|.+  |++.|.....|..|++.|+++++|.|..|++.|.
T Consensus         2 s~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A            2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             CSCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCCC
T ss_pred             CCCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCCC
Confidence            35788999987  9999999999999998 799999999999  9999999999999999999999999999999884

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.68  E-value=1.2e-16  Score=101.82  Aligned_cols=94  Identities=28%  Similarity=0.542  Sum_probs=84.2

Q ss_pred             ccccCCCCcccccccccccCChHHHHHHHHH-hCCCCC--------cccccccccccCchHHHHHHhhcCCCCCcccCc-
Q psy6676          20 GYIHSKEKPFKCTECGKGFCQSRTLAVHKIL-HLEESP--------HKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAA-   89 (144)
Q Consensus        20 ~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~-~~~~~~--------~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~-   89 (144)
                      ..+.....+|.|..|++.|.+...|..|++. |.+..+        |.|..|++.|.....|..|++.|.++++|.|.. 
T Consensus        17 ~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~   96 (155)
T 2rpc_A           17 KWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFP   96 (155)
T ss_dssp             CBCCTTCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCT
T ss_pred             EeechhhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcC
Confidence            3456678899999999999999999999987 665544        789999999999999999999999999999998 


Q ss_pred             -chhhhcChHHHHHhHhhccCCCCC
Q psy6676          90 -CGKVFRRNCDLRRHSLTHNLGSAT  113 (144)
Q Consensus        90 -C~~~f~~~~~l~~H~~~h~~~~~~  113 (144)
                       |++.|.....|..|+++|+...+.
T Consensus        97 ~C~~~f~~~~~L~~H~~~h~~~~~~  121 (155)
T 2rpc_A           97 GCGKIFARSENLKIHKRTHTGEKPF  121 (155)
T ss_dssp             TTCCEESCHHHHHHHHTTTCSSCSB
T ss_pred             CCCCccCCHHHHHHHHHhhCCCCCc
Confidence             999999999999999999876543

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.67  E-value=5.8e-17  Score=106.54  Aligned_cols=89  Identities=29%  Similarity=0.530  Sum_probs=81.3

Q ss_pred             cccccc-CCCCcccc--cccccccCChHHHHHHHHHhCCCCCccccc--ccccccCchHHHHHHhhcCCCCCcccCc---
Q psy6676          18 AQGYIH-SKEKPFKC--TECGKGFCQSRTLAVHKILHLEESPHKCPV--CSRSFNQRSNLKTHLLTHTDIKPYNCAA---   89 (144)
Q Consensus        18 ~~~~~h-~~~~~~~C--~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~--C~~~~~~~~~l~~h~~~h~~~~~~~C~~---   89 (144)
                      ++..+| .+.++|.|  +.|++.|.....|..|++.|.+.++|.|..  |++.|.....|..|++.|++   |.|..   
T Consensus        93 H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~---~~C~~~~~  169 (190)
T 1tf6_A           93 HFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDS  169 (190)
T ss_dssp             HHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS---CCCCSTTT
T ss_pred             HHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC---CcCCCCCc
Confidence            333566 57889999  889999999999999999999999999988  99999999999999999987   89999   


Q ss_pred             chhhhcChHHHHHhHhhccC
Q psy6676          90 CGKVFRRNCDLRRHSLTHNL  109 (144)
Q Consensus        90 C~~~f~~~~~l~~H~~~h~~  109 (144)
                      |++.|.....|..|+++|+.
T Consensus       170 C~~~f~~~~~l~~H~~~h~~  189 (190)
T 1tf6_A          170 CSFVGKTWTLYLKHVAECHQ  189 (190)
T ss_dssp             CCCCCSCHHHHHHHHTTCC-
T ss_pred             CCCccccHHHHHHHHHhhcC
Confidence            99999999999999999875

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.67  E-value=1.1e-16  Score=101.82  Aligned_cols=90  Identities=40%  Similarity=0.670  Sum_probs=81.7

Q ss_pred             ccCCCCccccccc-----ccccCChHHHHHHHHHhCCCCCccccc--ccccccCchHHHHHHhhcCCCCCcccCc--chh
Q psy6676          22 IHSKEKPFKCTEC-----GKGFCQSRTLAVHKILHLEESPHKCPV--CSRSFNQRSNLKTHLLTHTDIKPYNCAA--CGK   92 (144)
Q Consensus        22 ~h~~~~~~~C~~C-----~~~f~~~~~l~~h~~~~~~~~~~~C~~--C~~~~~~~~~l~~h~~~h~~~~~~~C~~--C~~   92 (144)
                      +|.+.++|.|++|     ++.|.....|..|++.|.+.++|.|.+  |++.|.....|..|++.|.++++|.|..  |++
T Consensus        28 ~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~  107 (155)
T 2gli_A           28 IHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSK  107 (155)
T ss_dssp             SSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCC
T ss_pred             cCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCC
Confidence            6888999998753     489999999999999999999999985  9999999999999999999999999998  999


Q ss_pred             hhcChHHHHHhH-hhccCCC
Q psy6676          93 VFRRNCDLRRHS-LTHNLGS  111 (144)
Q Consensus        93 ~f~~~~~l~~H~-~~h~~~~  111 (144)
                      .|.+...|..|+ ++|....
T Consensus       108 ~f~~~~~L~~H~~~~H~~~~  127 (155)
T 2gli_A          108 AFSNASDRAKHQNRTHSNEK  127 (155)
T ss_dssp             EESSSSTTHHHHHHTTCSCC
T ss_pred             ccCCHHHHHHHHHHhcCCCC
Confidence            999999999999 6776544

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.66  E-value=4.3e-17  Score=101.67  Aligned_cols=77  Identities=27%  Similarity=0.447  Sum_probs=71.0

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccccccccCchHHHHHHhhcCCCC------CcccCcchhhh
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIK------PYNCAACGKVF   94 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~------~~~C~~C~~~f   94 (144)
                      .+|.++++|.|++|++.|.....|..|++.|.+.++|.|.+|++.|.....|..|++.+++++      +|.|..|++.|
T Consensus        43 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~  122 (133)
T 2lt7_A           43 NIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQ  122 (133)
T ss_dssp             HHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHHHHHHHHHTCCCTTSSSCCEEECCCCSSC
T ss_pred             HHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHHHHHHHhHHhcCCCCCCCCCCeecCCCCchh
Confidence            679999999999999999999999999999999999999999999999999999999887654      58899999988


Q ss_pred             cCh
Q psy6676          95 RRN   97 (144)
Q Consensus        95 ~~~   97 (144)
                      ...
T Consensus       123 ~~~  125 (133)
T 2lt7_A          123 IRQ  125 (133)
T ss_dssp             CCC
T ss_pred             hhc
Confidence            654

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.65  E-value=2.5e-16  Score=90.66  Aligned_cols=75  Identities=24%  Similarity=0.474  Sum_probs=66.9

Q ss_pred             ccccCCCCcccccccccccCChHHHHHHHHHhCCC----CCcccccccccccCchHHHHHHhhcCCCCCcccCcchhhh
Q psy6676          20 GYIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEE----SPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVF   94 (144)
Q Consensus        20 ~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~----~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f   94 (144)
                      .++|.++++|.|.+|++.|.....|..|++.++..    ++|.|.+|++.|.....|..|++.|++++++.|..|+..|
T Consensus         7 ~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~   85 (86)
T 1x6h_A            7 GRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGPSS   85 (86)
T ss_dssp             STTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCCCCCC
T ss_pred             cceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCCCCCC
Confidence            46788999999999999999999999998877655    6899999999999999999999999999999999998765

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.65  E-value=2.9e-16  Score=88.78  Aligned_cols=67  Identities=37%  Similarity=0.693  Sum_probs=60.9

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNC   87 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C   87 (144)
                      ..+.++++|.|.+|++.|.....|..|++.|.+.++|.|.+|++.|.....|..|++.|+++++|.|
T Consensus        11 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           11 WQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             SCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CcCCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            4456788999999999999999999999999999999999999999999999999999999999987

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.64  E-value=6.5e-17  Score=95.75  Aligned_cols=75  Identities=17%  Similarity=0.323  Sum_probs=65.5

Q ss_pred             CChHHHHHHHHHhCCCCCccccccccccc-CchHHHHHHhhcCC-CCCcccCcchhhhcChHHHHHhHhhccCCCCC
Q psy6676          39 CQSRTLAVHKILHLEESPHKCPVCSRSFN-QRSNLKTHLLTHTD-IKPYNCAACGKVFRRNCDLRRHSLTHNLGSAT  113 (144)
Q Consensus        39 ~~~~~l~~h~~~~~~~~~~~C~~C~~~~~-~~~~l~~h~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  113 (144)
                      .....+..|++.|.+.++|.|.+|++.|. ....|..|++.|++ +++|.|..|++.|.....|..|+++|+.+.+.
T Consensus         7 ~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~   83 (98)
T 2gqj_A            7 GPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPS   83 (98)
T ss_dssp             CCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSS
T ss_pred             CCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCC
Confidence            33445677888899999999999999999 99999999999888 89999999999999999999999999976653

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.61  E-value=1.2e-15  Score=85.62  Aligned_cols=65  Identities=40%  Similarity=0.794  Sum_probs=49.9

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPY   85 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~   85 (144)
                      ..+.+.++|.|..|++.|.....|..|++.|.+.++|.|.+|++.|.....|..|++.|+++++|
T Consensus        10 ~~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           10 HMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             -CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             cccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            34567778888888888888888888888887777788888888887777788887777777664

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.60  E-value=7.4e-16  Score=91.70  Aligned_cols=69  Identities=17%  Similarity=0.242  Sum_probs=62.5

Q ss_pred             cCCCCcccccccccccCChHHHHHHHH-Hh---CCCCCcccccccccccCchHHHHH-HhhcCCCCCcccCcch
Q psy6676          23 HSKEKPFKCTECGKGFCQSRTLAVHKI-LH---LEESPHKCPVCSRSFNQRSNLKTH-LLTHTDIKPYNCAACG   91 (144)
Q Consensus        23 h~~~~~~~C~~C~~~f~~~~~l~~h~~-~~---~~~~~~~C~~C~~~~~~~~~l~~h-~~~h~~~~~~~C~~C~   91 (144)
                      -.|++||.|..|++.|.....|..|++ .|   .+.++|.|.+|++.|.....|..| ++.|+++++|.|.++.
T Consensus        13 ~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~   86 (102)
T 2ghf_A           13 KKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVK   86 (102)
T ss_dssp             CCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECC
T ss_pred             CCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCccc
Confidence            457899999999999999999999997 48   567899999999999999999999 7999999999998754

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=1.5e-15  Score=84.30  Aligned_cols=62  Identities=23%  Similarity=0.447  Sum_probs=42.7

Q ss_pred             hCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcchhhhcChHHHHHhHhhccCCCC
Q psy6676          51 HLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTHNLGSA  112 (144)
Q Consensus        51 ~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  112 (144)
                      +.+.++|.|.+|++.|.....|..|++.|.++++|.|..|++.|.....|..|+++|+.+.+
T Consensus         4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p   65 (70)
T 1x5w_A            4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS   65 (70)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCC
Confidence            44556666666776676666777777667677777777777777777777777777765543

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.58  E-value=2.6e-15  Score=88.56  Aligned_cols=72  Identities=19%  Similarity=0.389  Sum_probs=65.3

Q ss_pred             ccCChHHHHHHHHHhCCCCCcccccccccc-cCchHHHHHHhhcCCCCCcccCcchhhhcChHHHHHh-HhhccC
Q psy6676          37 GFCQSRTLAVHKILHLEESPHKCPVCSRSF-NQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCDLRRH-SLTHNL  109 (144)
Q Consensus        37 ~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~-~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~  109 (144)
                      .|.....+..|.+.+.+.++|.|..|++.| .....|..|++.| ++++|.|..|++.|.....|..| +++|..
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~   88 (96)
T 2ctd_A           15 VYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNS   88 (96)
T ss_dssp             SSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCC
T ss_pred             CCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCC
Confidence            456667788898888889999999999999 9999999999999 99999999999999999999999 788764

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.57  E-value=1.2e-15  Score=86.21  Aligned_cols=67  Identities=30%  Similarity=0.558  Sum_probs=44.4

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHh-hcCCC-CCcccCcchhhhcChHHHHHhHhhccCCCCC
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLL-THTDI-KPYNCAACGKVFRRNCDLRRHSLTHNLGSAT  113 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~-~h~~~-~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  113 (144)
                      |++.|.+.++|.|.+|++.|.....|..|++ .|.++ ++|.|..|++.|.....|..|++++|....+
T Consensus         6 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~p   74 (77)
T 2ct1_A            6 SGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGP   74 (77)
T ss_dssp             CCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCSCC
T ss_pred             cccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCCCC
Confidence            4455556666666666666666666666664 45543 6778888888888888888888777755544

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.57  E-value=1.4e-15  Score=84.93  Aligned_cols=58  Identities=38%  Similarity=0.694  Sum_probs=28.9

Q ss_pred             CCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcchhhhcChHHHHHhHhhccC
Q psy6676          52 LEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTHNL  109 (144)
Q Consensus        52 ~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  109 (144)
                      .+.++|.|.+|++.|.....|..|++.|.++++|.|..|++.|.....|..|+++|+.
T Consensus        10 ~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~   67 (72)
T 1x6e_A           10 SGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTS   67 (72)
T ss_dssp             TTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHS
T ss_pred             CCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCC
Confidence            3344444444444444444444444444444555555555555555555555555543

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.56  E-value=4.2e-15  Score=82.91  Aligned_cols=64  Identities=44%  Similarity=0.744  Sum_probs=60.3

Q ss_pred             ccccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccccccccCchHHHHHHhhcCCCC
Q psy6676          20 GYIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIK   83 (144)
Q Consensus        20 ~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~   83 (144)
                      ..+|.++++|.|++|++.|.....|..|++.|.+.++|.|.+|++.|.....|..|++.|+++.
T Consensus         6 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            6 SGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             CCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             CcccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            4688999999999999999999999999999999999999999999999999999999988754

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.56  E-value=8.8e-16  Score=94.98  Aligned_cols=84  Identities=19%  Similarity=0.205  Sum_probs=72.6

Q ss_pred             CCCcccccccccccC------ChHHHHHHHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcchhhhcChH
Q psy6676          25 KEKPFKCTECGKGFC------QSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNC   98 (144)
Q Consensus        25 ~~~~~~C~~C~~~f~------~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~   98 (144)
                      .++.+.|.+|...|.      ....|..|+ .|.+.++|.|..|++.|.....|..|++.|  +++|.|..|++.|....
T Consensus        38 ~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~  114 (129)
T 2wbt_A           38 EQKRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTD  114 (129)
T ss_dssp             HHHHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHH
T ss_pred             hhCcccchhhhcccCCCcccCCHHHHHHHH-HhCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHH
Confidence            356678888877765      556667776 578889999999999999999999999998  79999999999999999


Q ss_pred             HHHHhHhhccCCC
Q psy6676          99 DLRRHSLTHNLGS  111 (144)
Q Consensus        99 ~l~~H~~~h~~~~  111 (144)
                      .|..|+++|+..-
T Consensus       115 ~l~~H~~~h~~~~  127 (129)
T 2wbt_A          115 SALDHVCKKHNIC  127 (129)
T ss_dssp             HHHHHHHHTTCCC
T ss_pred             HHHHHHHHHCCcc
Confidence            9999999998653

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.55  E-value=2.7e-15  Score=79.80  Aligned_cols=55  Identities=35%  Similarity=0.629  Sum_probs=37.0

Q ss_pred             CCCcccccccccccCchHHHHHHhhcCCCCCcccCcchhhhcChHHHHHhHhhcc
Q psy6676          54 ESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTHN  108 (144)
Q Consensus        54 ~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  108 (144)
                      .++|.|..|++.|.....|..|++.|.++++|.|..|++.|.....|..|+++|+
T Consensus         2 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            2 SSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             ---CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            3556666677777666667777766666677777777777777777777777665

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=2.4e-15  Score=86.53  Aligned_cols=74  Identities=24%  Similarity=0.454  Sum_probs=65.0

Q ss_pred             HHHHHHHhCCCCCcccccccccccCchHHHHHHhhcCCC----CCcccCcchhhhcChHHHHHhHhhccCCCCCCCCC
Q psy6676          44 LAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDI----KPYNCAACGKVFRRNCDLRRHSLTHNLGSATSTSS  117 (144)
Q Consensus        44 l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~----~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  117 (144)
                      +..|++.|.+.++|.|.+|++.|.....|..|++.+...    ++|.|..|++.|.....|..|+++|+.........
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~   80 (86)
T 1x6h_A            3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGEN   80 (86)
T ss_dssp             TTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCC
T ss_pred             cccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCC
Confidence            456788899999999999999999999999999877665    78999999999999999999999999876654443

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=6.1e-15  Score=81.77  Aligned_cols=64  Identities=30%  Similarity=0.484  Sum_probs=60.3

Q ss_pred             ccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCc
Q psy6676          22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPY   85 (144)
Q Consensus        22 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~   85 (144)
                      .|.++++|.|..|++.|.....|..|++.|.+.++|.|.+|++.|.....|..|++.|+++++.
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCC
Confidence            4678999999999999999999999999999999999999999999999999999999888764

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.54  E-value=8.3e-15  Score=82.10  Aligned_cols=62  Identities=35%  Similarity=0.713  Sum_probs=58.0

Q ss_pred             HhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcchhhhcChHHHHHhHhhccCCC
Q psy6676          50 LHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTHNLGS  111 (144)
Q Consensus        50 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  111 (144)
                      .+.+.++|.|..|++.|.....|..|++.|.++++|.|..|++.|.....|..|+++|+.+.
T Consensus        11 ~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k   72 (74)
T 2lce_A           11 MTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEK   72 (74)
T ss_dssp             CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSC
T ss_pred             ccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCC
Confidence            45678899999999999999999999999999999999999999999999999999998654

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.54  E-value=4.8e-15  Score=83.88  Aligned_cols=62  Identities=21%  Similarity=0.416  Sum_probs=39.6

Q ss_pred             hCCCCCcccccccccccCchHHHHHHhhcCC---CCCcccCcchhhhcChHHHHHhHhhccCCCC
Q psy6676          51 HLEESPHKCPVCSRSFNQRSNLKTHLLTHTD---IKPYNCAACGKVFRRNCDLRRHSLTHNLGSA  112 (144)
Q Consensus        51 ~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  112 (144)
                      |.+.++|.|.+|++.|.....|..|++.|.+   +++|.|..|++.|.....|..|++.+|....
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~   66 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALL   66 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTS
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCC
Confidence            3445555555555555555566666655553   6777777788888887788888766554433

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.53  E-value=1.1e-14  Score=83.86  Aligned_cols=55  Identities=20%  Similarity=0.449  Sum_probs=27.4

Q ss_pred             ccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccccccccCchHHHHHH
Q psy6676          22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHL   76 (144)
Q Consensus        22 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~   76 (144)
                      ++...++|.|++|++.|.....|..|++.|++.++|.|.+|++.|.....|..|+
T Consensus        22 ~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~   76 (85)
T 2lv2_A           22 LSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHI   76 (85)
T ss_dssp             SCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHH
T ss_pred             CCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhC
Confidence            3444445555555555555555555555554444455544444444444444443

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.52  E-value=2.6e-14  Score=82.23  Aligned_cols=61  Identities=28%  Similarity=0.491  Sum_probs=54.9

Q ss_pred             HhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcchhhhcChHHHHHhHh-hccCC
Q psy6676          50 LHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCDLRRHSL-THNLG  110 (144)
Q Consensus        50 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~  110 (144)
                      .+...++|.|.+|++.|.....|..|++.|+++++|.|..|++.|.....|..|++ +|..+
T Consensus        22 ~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E   83 (85)
T 2lv2_A           22 LSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSE   83 (85)
T ss_dssp             SCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTC
T ss_pred             CCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCC
Confidence            35567889999999999999999999999999999999999999999999999975 45443

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.51  E-value=4.4e-15  Score=81.37  Aligned_cols=57  Identities=33%  Similarity=0.602  Sum_probs=29.4

Q ss_pred             CCCCCcccccccccccCchHHHHHHhh-c-CCCCCcccCcchhhhcChHHHHHhHhhcc
Q psy6676          52 LEESPHKCPVCSRSFNQRSNLKTHLLT-H-TDIKPYNCAACGKVFRRNCDLRRHSLTHN  108 (144)
Q Consensus        52 ~~~~~~~C~~C~~~~~~~~~l~~h~~~-h-~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  108 (144)
                      .+.++|.|..|++.|.....|..|++. | .++++|.|..|++.|.....|..|++++|
T Consensus         6 ~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H   64 (66)
T 2drp_A            6 EGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIH   64 (66)
T ss_dssp             EETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHT
T ss_pred             CCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHc
Confidence            334444444444444444444444443 3 34555566666666666666666665554

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.51  E-value=2.3e-14  Score=80.83  Aligned_cols=62  Identities=37%  Similarity=0.658  Sum_probs=57.6

Q ss_pred             hCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcchhhhcChHHHHHhHhhccCCCC
Q psy6676          51 HLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTHNLGSA  112 (144)
Q Consensus        51 ~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  112 (144)
                      +.+.++|.|.+|++.|.....|..|++.|.++++|.|..|++.|.....|..|+++|+.+.+
T Consensus        13 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p   74 (77)
T 2cot_A           13 QRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGP   74 (77)
T ss_dssp             CCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCC
T ss_pred             CCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCC
Confidence            45678999999999999999999999999999999999999999999999999999986643

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.50  E-value=2.6e-14  Score=75.96  Aligned_cols=55  Identities=31%  Similarity=0.634  Sum_probs=36.4

Q ss_pred             CcccccccccccCchHHHHHHhhcCCCCCcccCcchhhhcChHHHHHhHhhccCC
Q psy6676          56 PHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTHNLG  110 (144)
Q Consensus        56 ~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  110 (144)
                      ||.|..|++.|.....|..|++.|.++++|.|..|++.|.....|..|+++|+.+
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   55 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHS   55 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhccc
Confidence            3566666666666666666666666666667766777777766777776666543

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.49  E-value=7e-15  Score=86.90  Aligned_cols=68  Identities=18%  Similarity=0.318  Sum_probs=63.2

Q ss_pred             ccccCCCCcccccccccccC-ChHHHHHHHHHhCC-CCCcccccccccccCchHHHHHHhhcCCCCCccc
Q psy6676          20 GYIHSKEKPFKCTECGKGFC-QSRTLAVHKILHLE-ESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNC   87 (144)
Q Consensus        20 ~~~h~~~~~~~C~~C~~~f~-~~~~l~~h~~~~~~-~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C   87 (144)
                      ..+|.+.++|.|.+|++.|. ....|..|++.|.+ .++|.|.+|++.|.....|..|++.|++++++..
T Consensus        16 ~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~~~   85 (98)
T 2gqj_A           16 QRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSDA   85 (98)
T ss_dssp             HHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSSCC
T ss_pred             HHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCCCC
Confidence            46889999999999999999 99999999999998 8899999999999999999999999999887544

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.49  E-value=1.9e-14  Score=78.76  Aligned_cols=62  Identities=18%  Similarity=0.531  Sum_probs=56.6

Q ss_pred             ccccCCCCcccccccccccCChHHHHHHHHH-h-CCCCCcccccccccccCchHHHHHHhhcCC
Q psy6676          20 GYIHSKEKPFKCTECGKGFCQSRTLAVHKIL-H-LEESPHKCPVCSRSFNQRSNLKTHLLTHTD   81 (144)
Q Consensus        20 ~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~-~-~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~   81 (144)
                      ..+|.++++|.|+.|++.|.....|..|++. | .+.++|.|..|++.|.....|..|++.+++
T Consensus         2 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            2 EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             -CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             ccccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            4678899999999999999999999999988 6 588999999999999999999999998765

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.48  E-value=3.5e-14  Score=75.42  Aligned_cols=56  Identities=32%  Similarity=0.561  Sum_probs=50.3

Q ss_pred             CCCcccccccccccCChHHHHHHHHHhCCCCCcccccccccccCchHHHHHHhhcC
Q psy6676          25 KEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHT   80 (144)
Q Consensus        25 ~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~   80 (144)
                      |.++|.|+.|++.|.....|..|++.|.+.++|.|..|++.|.....|..|++.|+
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            46899999999999999999999999999999999999999999999999998875

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.47  E-value=6.6e-14  Score=83.53  Aligned_cols=67  Identities=30%  Similarity=0.624  Sum_probs=63.6

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNC   87 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C   87 (144)
                      .+|.+.++|.|.+|++.|.....|..|++.|.+.++|.|.+|++.|.....|..|++.|.++++|.+
T Consensus        38 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~~  104 (106)
T 2ee8_A           38 RTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA  104 (106)
T ss_dssp             HHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHHHHTTSCCCCCC
T ss_pred             HHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHHHHhCCCCCCcC
Confidence            5788899999999999999999999999999999999999999999999999999999999998864

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.47  E-value=4.8e-14  Score=83.03  Aligned_cols=65  Identities=14%  Similarity=0.233  Sum_probs=59.1

Q ss_pred             cccCCCCccccccccccc-CChHHHHHHHHHhCCCCCcccccccccccCchHHHHH-HhhcCCCCCcc
Q psy6676          21 YIHSKEKPFKCTECGKGF-CQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTH-LLTHTDIKPYN   86 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f-~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h-~~~h~~~~~~~   86 (144)
                      .++.+.++|.|+.|++.| .....|..|++.| +.++|.|.+|++.|.....|..| ++.|+++..|.
T Consensus        27 ~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p~~~   93 (96)
T 2ctd_A           27 LEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLPSGP   93 (96)
T ss_dssp             HHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCSSCS
T ss_pred             HHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCCCCCC
Confidence            556788999999999999 9999999999999 99999999999999999999999 88998755443

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.47  E-value=6.7e-14  Score=78.08  Aligned_cols=64  Identities=33%  Similarity=0.745  Sum_probs=40.9

Q ss_pred             ccccccccCCCCccccc--ccccccCChHHHHHHHHHhCCCCCcccccccccccCchHHHHHHhhc
Q psy6676          16 NLAQGYIHSKEKPFKCT--ECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTH   79 (144)
Q Consensus        16 ~~~~~~~h~~~~~~~C~--~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h   79 (144)
                      +.+...++.+.++|.|+  .|++.|.....|..|++.|.+.++|.|.+|++.|.....|..|++.|
T Consensus         7 ~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   72 (73)
T 1f2i_G            7 NNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH   72 (73)
T ss_dssp             -CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTC
T ss_pred             cchhhccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhc
Confidence            33445666677777775  47777777777777766666666666666666666666666666554

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.47  E-value=6.7e-14  Score=79.10  Aligned_cols=66  Identities=21%  Similarity=0.354  Sum_probs=59.0

Q ss_pred             ccCCCCcccccccccccCChHHHHHHHHHhCC---CCCcccccccccccCchHHHHHH-hhcCCCCCccc
Q psy6676          22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLE---ESPHKCPVCSRSFNQRSNLKTHL-LTHTDIKPYNC   87 (144)
Q Consensus        22 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~---~~~~~C~~C~~~~~~~~~l~~h~-~~h~~~~~~~C   87 (144)
                      +|.++++|.|.+|++.|.....|..|++.|.+   .++|.|.+|++.|.....|..|+ ..|.++.+...
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~   70 (78)
T 2d9h_A            1 GSSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQ   70 (78)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSCCS
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCCcc
Confidence            47899999999999999999999999999985   78999999999999999999999 56777666543

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.45  E-value=1.2e-13  Score=73.32  Aligned_cols=56  Identities=29%  Similarity=0.574  Sum_probs=53.4

Q ss_pred             cccccccccccCChHHHHHHHHHhCCCCCcccccccccccCchHHHHHHhhcCCCC
Q psy6676          28 PFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIK   83 (144)
Q Consensus        28 ~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~   83 (144)
                      ||.|..|++.|.....|..|++.|.+.++|.|..|++.|.....|..|++.|.+++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            68999999999999999999999999999999999999999999999999988765

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.44  E-value=1.2e-13  Score=74.10  Aligned_cols=50  Identities=40%  Similarity=0.818  Sum_probs=34.6

Q ss_pred             CcccccccccccCchHHHHHHhhcCCCCCcccCcchhhhcChHHHHHhHh
Q psy6676          56 PHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCDLRRHSL  105 (144)
Q Consensus        56 ~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  105 (144)
                      +|.|..|++.|.....|..|++.|.++++|.|..|++.|.....|..|++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   51 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQ   51 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHT
T ss_pred             cCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHH
Confidence            56666666666666666677666666677777777777777777777753

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.43  E-value=3.1e-13  Score=76.16  Aligned_cols=63  Identities=35%  Similarity=0.682  Sum_probs=56.2

Q ss_pred             cccccCCCCcccccccccccCChHHHHHHHH-HhCCC-CCcccccccccccCchHHHHHHhhcCC
Q psy6676          19 QGYIHSKEKPFKCTECGKGFCQSRTLAVHKI-LHLEE-SPHKCPVCSRSFNQRSNLKTHLLTHTD   81 (144)
Q Consensus        19 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~-~~~~~-~~~~C~~C~~~~~~~~~l~~h~~~h~~   81 (144)
                      +.++|.++++|.|.+|++.|.....|..|++ .|.+. ++|.|.+|++.|.....|..|++.+++
T Consensus         6 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~   70 (77)
T 2ct1_A            6 SGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHS   70 (77)
T ss_dssp             CCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             cccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCC
Confidence            3478999999999999999999999999997 56664 799999999999999999999987543

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.41  E-value=1.1e-13  Score=77.23  Aligned_cols=59  Identities=34%  Similarity=0.693  Sum_probs=54.8

Q ss_pred             HhCCCCCcccc--cccccccCchHHHHHHhhcCCCCCcccCcchhhhcChHHHHHhHhhcc
Q psy6676          50 LHLEESPHKCP--VCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTHN  108 (144)
Q Consensus        50 ~~~~~~~~~C~--~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  108 (144)
                      .+.+.++|.|.  .|++.|.....|..|++.|.++++|.|..|++.|.....|..|+++|+
T Consensus        13 ~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           13 VVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             cCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            46678899997  599999999999999999999999999999999999999999999874

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.41  E-value=4.8e-13  Score=78.31  Aligned_cols=64  Identities=33%  Similarity=0.599  Sum_probs=60.7

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCC
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKP   84 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~   84 (144)
                      .+|.+.++|.|+.|++.|.....|..|++.|.+.++|.|.+|++.|.....|..|++.|++++.
T Consensus        29 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   92 (96)
T 2dmd_A           29 RCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHTGDSG   92 (96)
T ss_dssp             GGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHHHTTCCSCCC
T ss_pred             HhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHhcCCCC
Confidence            5788899999999999999999999999999999999999999999999999999999998765

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.39  E-value=1.9e-13  Score=79.04  Aligned_cols=63  Identities=35%  Similarity=0.675  Sum_probs=58.5

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccccccccCchHHHHHHhhcCCCC
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIK   83 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~   83 (144)
                      .+|.+.++|.|+.|++.|.....|..|++.|.+.++|.|.+|++.|.....|..|++.|++++
T Consensus        27 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~k   89 (90)
T 1a1h_A           27 RIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQK   89 (90)
T ss_dssp             HHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHGGGGC--
T ss_pred             HHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHHHHHhcccC
Confidence            568889999999999999999999999999999999999999999999999999999998764

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.39  E-value=2.7e-13  Score=80.59  Aligned_cols=63  Identities=19%  Similarity=0.240  Sum_probs=56.5

Q ss_pred             hCCCCCcccccccccccCchHHHHHHh-hc---CCCCCcccCcchhhhcChHHHHHh-HhhccCCCCC
Q psy6676          51 HLEESPHKCPVCSRSFNQRSNLKTHLL-TH---TDIKPYNCAACGKVFRRNCDLRRH-SLTHNLGSAT  113 (144)
Q Consensus        51 ~~~~~~~~C~~C~~~~~~~~~l~~h~~-~h---~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~~~~  113 (144)
                      ..|.++|.|..|++.|.....|..|++ .|   .++++|.|..|++.|.....|..| +++|..+.+.
T Consensus        13 ~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy   80 (102)
T 2ghf_A           13 KKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENF   80 (102)
T ss_dssp             CCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCE
T ss_pred             CCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCe
Confidence            467889999999999999999999997 58   668999999999999999999999 7888876554

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.39  E-value=5.9e-13  Score=71.35  Aligned_cols=56  Identities=30%  Similarity=0.629  Sum_probs=52.3

Q ss_pred             CcccccccccccCChHHHHHHHHHhCCCCCcccccccccccCchHHHHHH-hhcCCC
Q psy6676          27 KPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHL-LTHTDI   82 (144)
Q Consensus        27 ~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~-~~h~~~   82 (144)
                      +||.|..|++.|.....|..|++.|.+.++|.|..|++.|.....|..|+ +.|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            58999999999999999999999999999999999999999999999997 677764

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.38  E-value=7e-13  Score=77.49  Aligned_cols=63  Identities=22%  Similarity=0.399  Sum_probs=54.0

Q ss_pred             CCcccccccccccCChHHHHHHHHH-hCCCCC--------cccccccccccCchHHHHHHhhcCCCCCcccC
Q psy6676          26 EKPFKCTECGKGFCQSRTLAVHKIL-HLEESP--------HKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCA   88 (144)
Q Consensus        26 ~~~~~C~~C~~~f~~~~~l~~h~~~-~~~~~~--------~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~   88 (144)
                      ...+.|..|++.|.....|..|++. |.+.++        |.|..|++.|.....|..|++.|+++++|.|.
T Consensus        23 ~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           23 QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             CSSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             cCCCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            4457799999999999999999987 877766        88888999998888899999888888888885

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.37  E-value=3.3e-13  Score=76.63  Aligned_cols=61  Identities=46%  Similarity=0.881  Sum_probs=57.2

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccccccccCchHHHHHHhhcCC
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTD   81 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~   81 (144)
                      .+|.+.++|.|+.|++.|.....|..|++.|.+.++|.|..|++.|.....|..|++.|++
T Consensus        22 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~g   82 (82)
T 2kmk_A           22 LIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG   82 (82)
T ss_dssp             HHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHHC-
T ss_pred             HHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhhCC
Confidence            5678899999999999999999999999999999999999999999999999999998864

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.36  E-value=1.4e-14  Score=80.62  Aligned_cols=64  Identities=22%  Similarity=0.350  Sum_probs=58.0

Q ss_pred             ccccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcc
Q psy6676          20 GYIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAAC   90 (144)
Q Consensus        20 ~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   90 (144)
                      .++|.+.++|.|..|++.|.....|..       .++|.|..|++.|.....|..|++.|+++++|.|..|
T Consensus        10 ~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A           10 QKIHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CCCCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             HHHhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            467899999999999999988877665       6789999999999999999999999999999999987

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.33  E-value=5.7e-13  Score=76.96  Aligned_cols=54  Identities=37%  Similarity=0.842  Sum_probs=52.4

Q ss_pred             CCcccccccccccCchHHHHHHhhcCCCCCcccCcchhhhcChHHHHHhHhhcc
Q psy6676          55 SPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTHN  108 (144)
Q Consensus        55 ~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  108 (144)
                      ++|.|..|++.|.....|..|++.|.++++|.|..|++.|.....|..|+++|+
T Consensus         2 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~   55 (88)
T 1llm_C            2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH   55 (88)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             CCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhC
Confidence            689999999999999999999999999999999999999999999999999987

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.30  E-value=9.9e-13  Score=71.94  Aligned_cols=51  Identities=22%  Similarity=0.431  Sum_probs=24.7

Q ss_pred             CCcccccccccccCchHHHHHHhhcCCCCCcccC-cchhhhcChHHHHHhHhhc
Q psy6676          55 SPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCA-ACGKVFRRNCDLRRHSLTH  107 (144)
Q Consensus        55 ~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~-~C~~~f~~~~~l~~H~~~h  107 (144)
                      ++|.|..|++.|. ...|..|++. +++++|.|. .|++.|.....|..|+++|
T Consensus         9 ~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~h   60 (66)
T 2eod_A            9 RTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDS   60 (66)
T ss_dssp             CEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTT
T ss_pred             CCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhh
Confidence            3444444444444 4444444444 444455555 4555555555555555444

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.29  E-value=3e-12  Score=76.49  Aligned_cols=62  Identities=18%  Similarity=0.299  Sum_probs=58.1

Q ss_pred             CCcccccccccccCChHHHHHHHHHhCCCCCcccccccccccCchHHHHHHh-hcCCCCCcccC
Q psy6676          26 EKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLL-THTDIKPYNCA   88 (144)
Q Consensus        26 ~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~-~h~~~~~~~C~   88 (144)
                      .++|.|.+|++.|.....|..|++ |.+.++|.|.+|++.|.....|..|++ .|.++++|.|.
T Consensus        40 ~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           40 RNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSIWRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             HHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHHHHHHHHTSCCCCCCCCC
T ss_pred             CCCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHHHHHHHHHcCCCCCCCCC
Confidence            468999999999999999999996 999999999999999999999999997 89999999875

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.29  E-value=3.5e-12  Score=74.40  Aligned_cols=59  Identities=31%  Similarity=0.640  Sum_probs=55.8

Q ss_pred             CCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcchhhhcChHHHHHhHhhccCC
Q psy6676          52 LEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTHNLG  110 (144)
Q Consensus        52 ~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  110 (144)
                      .+.++|.|..|++.|.....|..|++.|.++++|.|..|++.|.....|..|+++|+..
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   61 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS   61 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCC
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCC
Confidence            45688999999999999999999999999999999999999999999999999999865

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.27  E-value=3.3e-12  Score=76.58  Aligned_cols=62  Identities=27%  Similarity=0.550  Sum_probs=57.4

Q ss_pred             HhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcchhhhcChHHHHHhHhhccCCCC
Q psy6676          50 LHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTHNLGSA  112 (144)
Q Consensus        50 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  112 (144)
                      .|.+.++|.| .|++.|.....|..|++.|.++++|.|..|++.|.....|..|+++|+...+
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   65 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKP   65 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCC
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            4678899999 8999999999999999999999999999999999999999999999876543

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.27  E-value=3.3e-12  Score=69.83  Aligned_cols=60  Identities=27%  Similarity=0.442  Sum_probs=54.7

Q ss_pred             cCCCCcccccccccccCChHHHHHHHHHhCCCCCcccc-cccccccCchHHHHHHhhcCCCCC
Q psy6676          23 HSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCP-VCSRSFNQRSNLKTHLLTHTDIKP   84 (144)
Q Consensus        23 h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~-~C~~~~~~~~~l~~h~~~h~~~~~   84 (144)
                      ..+.+||.|..|++.|. ...|..|++. .+.++|.|. .|++.|.....|..|++.|...++
T Consensus         5 ~C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            5 SSGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CCCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             cCCCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            45688999999999999 9999999998 899999999 999999999999999998876554

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.25  E-value=5.3e-12  Score=71.20  Aligned_cols=61  Identities=30%  Similarity=0.535  Sum_probs=55.7

Q ss_pred             CCCCCccccc--ccccccCchHHHHHHh-hcCCCCCcccCc--chhhhcChHHHHHhHhhccCCCC
Q psy6676          52 LEESPHKCPV--CSRSFNQRSNLKTHLL-THTDIKPYNCAA--CGKVFRRNCDLRRHSLTHNLGSA  112 (144)
Q Consensus        52 ~~~~~~~C~~--C~~~~~~~~~l~~h~~-~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~  112 (144)
                      .+.++|.|..  |++.|.....|..|++ .|.++++|.|..  |++.|.....|..|+++|+.+.+
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~   68 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRD   68 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCC
Confidence            4567899987  9999999999999999 799999999998  99999999999999999986654

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.25  E-value=8.4e-12  Score=73.40  Aligned_cols=61  Identities=38%  Similarity=0.728  Sum_probs=57.2

Q ss_pred             cccCCCCccccc--ccccccCChHHHHHHHHHhCCCCCcccccccccccCchHHHHHHhhcCC
Q psy6676          21 YIHSKEKPFKCT--ECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTD   81 (144)
Q Consensus        21 ~~h~~~~~~~C~--~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~   81 (144)
                      .+|.+.++|.|+  .|++.|.....|..|++.|.+.++|.|.+|++.|.....|..|++.|.+
T Consensus        38 ~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~  100 (100)
T 2ebt_A           38 RTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQN  100 (100)
T ss_dssp             HHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHHHHHHHHCC
T ss_pred             HHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHHHHHHHhCC
Confidence            578899999996  6999999999999999999999999999999999999999999998863

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.25  E-value=3.8e-12  Score=70.62  Aligned_cols=55  Identities=31%  Similarity=0.641  Sum_probs=29.2

Q ss_pred             cCCCCcccccc--cccccCChHHHHHHHHHhCCCCCccccc--ccccccCchHHHHHHh
Q psy6676          23 HSKEKPFKCTE--CGKGFCQSRTLAVHKILHLEESPHKCPV--CSRSFNQRSNLKTHLL   77 (144)
Q Consensus        23 h~~~~~~~C~~--C~~~f~~~~~l~~h~~~~~~~~~~~C~~--C~~~~~~~~~l~~h~~   77 (144)
                      ....++|.|..  |++.|.....|..|++.|.+.++|.|.+  |++.|.....|..|++
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~   70 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRR   70 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTT
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhh
Confidence            34455556655  5555555555555555555555555533  5555555555555544

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.23  E-value=5.6e-12  Score=77.68  Aligned_cols=60  Identities=25%  Similarity=0.454  Sum_probs=56.0

Q ss_pred             ccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccccccccCchHHHHHHhhcCCCC
Q psy6676          22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIK   83 (144)
Q Consensus        22 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~   83 (144)
                      .|.+.+||.|..|++.|.....|..|++.|  .++|.|..|++.|.....|..|++.|++..
T Consensus        68 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~~~  127 (129)
T 2wbt_A           68 ASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHNIC  127 (129)
T ss_dssp             HHHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHHTTCCC
T ss_pred             HhCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHHHCCcc
Confidence            578899999999999999999999999998  788999999999999999999999998753

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.21  E-value=1.6e-11  Score=70.66  Aligned_cols=59  Identities=34%  Similarity=0.719  Sum_probs=55.9

Q ss_pred             cccCCCCccccc--ccccccCChHHHHHHHHHhCCCCCcccccccccccCchHHHHHHhhc
Q psy6676          21 YIHSKEKPFKCT--ECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTH   79 (144)
Q Consensus        21 ~~h~~~~~~~C~--~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h   79 (144)
                      .+|.+.++|.|+  .|++.|.....|..|++.|.+.++|.|..|++.|.....|..|++.|
T Consensus        28 ~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   88 (89)
T 2wbs_A           28 RTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH   88 (89)
T ss_dssp             TTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHGGGG
T ss_pred             HhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHHHHHHhh
Confidence            578899999997  59999999999999999999999999999999999999999999987

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.19  E-value=2.6e-11  Score=67.19  Aligned_cols=57  Identities=37%  Similarity=0.703  Sum_probs=52.0

Q ss_pred             hCCCCCccccc--ccccccCchHHHHHHhhcCCCCCcccCc--chhhhcChHHHHHhHhhc
Q psy6676          51 HLEESPHKCPV--CSRSFNQRSNLKTHLLTHTDIKPYNCAA--CGKVFRRNCDLRRHSLTH  107 (144)
Q Consensus        51 ~~~~~~~~C~~--C~~~~~~~~~l~~h~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h  107 (144)
                      ....++|.|..  |++.|.....|..|++.|.++++|.|.+  |++.|.....|..|+++|
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            34567899988  9999999999999999999999999965  999999999999999875

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=6.1e-12  Score=63.69  Aligned_cols=42  Identities=38%  Similarity=0.623  Sum_probs=26.9

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVC   62 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C   62 (144)
                      .+|.++++|.|+.|++.|.....|..|++.|.+.++|.|.+|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            5 SSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             cCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            456666666666666666666666666666666666666554

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.19  E-value=2.6e-11  Score=61.32  Aligned_cols=43  Identities=47%  Similarity=0.791  Sum_probs=29.8

Q ss_pred             ccccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccc
Q psy6676          20 GYIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVC   62 (144)
Q Consensus        20 ~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C   62 (144)
                      .++|.++++|.|+.|++.|.....|..|++.|.+.++|.|.+|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            4 GSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3556677777777777777777777777777777677776655

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.19  E-value=1.3e-11  Score=64.81  Aligned_cols=46  Identities=39%  Similarity=0.706  Sum_probs=27.1

Q ss_pred             ccCCCCcccccccccccCChHHHHHHHH-HhCCCCCccccccccccc
Q psy6676          22 IHSKEKPFKCTECGKGFCQSRTLAVHKI-LHLEESPHKCPVCSRSFN   67 (144)
Q Consensus        22 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~-~~~~~~~~~C~~C~~~~~   67 (144)
                      .|.++++|.|++|++.|.....|..|++ .|.+.++|.|.+|++.|.
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~   52 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS   52 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCC
Confidence            3455566666666666666666666654 555555566666655554

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.18  E-value=7.1e-12  Score=63.47  Aligned_cols=44  Identities=32%  Similarity=0.473  Sum_probs=38.5

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAAC   90 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   90 (144)
                      |++.|.+.++|.|.+|++.|.....|..|++.|+++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45667888899999999999999999999999999999999877

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=7.3e-12  Score=63.38  Aligned_cols=42  Identities=38%  Similarity=0.604  Sum_probs=27.4

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVC   62 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C   62 (144)
                      .+|.++++|.|+.|++.|.....|..|++.|.+.++|.|.+|
T Consensus         5 ~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            5 SSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             SCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            456666666666666666666666666666666666666654

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=8e-12  Score=63.21  Aligned_cols=42  Identities=33%  Similarity=0.542  Sum_probs=28.1

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVC   62 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C   62 (144)
                      .+|.++++|.|+.|++.|.....|..|++.|.+.++|.|.+|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            5 SSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             ccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            456666667777777777666666666666666666666654

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.17  E-value=7.6e-12  Score=63.33  Aligned_cols=42  Identities=31%  Similarity=0.512  Sum_probs=25.6

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVC   62 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C   62 (144)
                      .+|.++++|.|+.|++.|.....|..|++.|.+.++|.|.+|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            5 SSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            445566666666666666666666666666666666666554

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=6.3e-12  Score=63.66  Aligned_cols=42  Identities=36%  Similarity=0.617  Sum_probs=25.0

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVC   62 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C   62 (144)
                      .+|.++++|.|+.|++.|.....|..|++.|.+.++|.|.+|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            5 SSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             cccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            445556666666666666666666666666665555655544

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.17  E-value=2.7e-11  Score=63.53  Aligned_cols=46  Identities=22%  Similarity=0.421  Sum_probs=42.9

Q ss_pred             hCCCCCcccccccccccCchHHHHHHh-hcCCCCCcccCcchhhhcC
Q psy6676          51 HLEESPHKCPVCSRSFNQRSNLKTHLL-THTDIKPYNCAACGKVFRR   96 (144)
Q Consensus        51 ~~~~~~~~C~~C~~~~~~~~~l~~h~~-~h~~~~~~~C~~C~~~f~~   96 (144)
                      +.+.++|.|.+|++.|.....|..|++ .|.++++|.|..|++.|.+
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            7 GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            567789999999999999999999997 8999999999999999975

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.17  E-value=3.3e-11  Score=60.63  Aligned_cols=43  Identities=26%  Similarity=0.399  Sum_probs=33.6

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCccccccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCS   63 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~   63 (144)
                      .+|.++++|.|..|++.|.....|..|++.|.+.++|.|+.|+
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            3 SGSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CCcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            4567778888888888888888888888888877778887774

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.17  E-value=6.6e-12  Score=63.53  Aligned_cols=42  Identities=26%  Similarity=0.435  Sum_probs=24.7

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVC   62 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C   62 (144)
                      .+|.++++|.|+.|++.|.....|..|++.|.+.++|.|.+|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            5 SSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             cCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            345556666666666666666666666655655555555544

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=9e-12  Score=63.08  Aligned_cols=42  Identities=33%  Similarity=0.569  Sum_probs=27.9

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVC   62 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C   62 (144)
                      .+|.++++|.|..|++.|.....|..|++.|.+.++|.|.+|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            5 SSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             SCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             cCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            456666666666666666666666666666666666666654

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=8.6e-12  Score=63.14  Aligned_cols=42  Identities=38%  Similarity=0.702  Sum_probs=29.0

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVC   62 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C   62 (144)
                      .+|.++++|.|++|++.|.....|..|++.|.+.++|.|..|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            5 SSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            456667777777777777777777777777776666766654

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=7e-12  Score=63.46  Aligned_cols=42  Identities=31%  Similarity=0.646  Sum_probs=28.0

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVC   62 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C   62 (144)
                      .+|.++++|.|++|++.|.....|..|++.|.+.++|.|.+|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            5 SSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            456666667777777776666666666666666666666654

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=9.2e-12  Score=63.02  Aligned_cols=42  Identities=31%  Similarity=0.579  Sum_probs=27.1

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVC   62 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C   62 (144)
                      .+|.++++|.|+.|++.|.....|..|++.|.+.++|.|.+|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            5 SSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             cCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            456666666666666666666666666666666666666554

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=3.4e-11  Score=60.85  Aligned_cols=44  Identities=30%  Similarity=0.394  Sum_probs=41.2

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAAC   90 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   90 (144)
                      |++.|.+.++|.|..|++.|.....|..|++.|+++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            55678899999999999999999999999999999999999987

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=8.9e-12  Score=63.08  Aligned_cols=42  Identities=33%  Similarity=0.607  Sum_probs=27.1

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVC   62 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C   62 (144)
                      .+|.++++|.|+.|++.|.....|..|++.|.+.++|.|.+|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            5 SSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            456666666666666666666666666666666666666554

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=3.9e-11  Score=60.67  Aligned_cols=44  Identities=27%  Similarity=0.443  Sum_probs=41.2

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAAC   90 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   90 (144)
                      |++.|.+.++|.|.+|++.|.....|..|++.|+++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            45678899999999999999999999999999999999999987

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=6.9e-12  Score=63.51  Aligned_cols=42  Identities=36%  Similarity=0.600  Sum_probs=27.2

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVC   62 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C   62 (144)
                      .+|.++++|.|+.|++.|.....|..|++.|.+.++|.|.+|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            5 SSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             cCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            456666666666666666666666666666666666666554

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=8.8e-12  Score=63.06  Aligned_cols=42  Identities=40%  Similarity=0.691  Sum_probs=26.7

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVC   62 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C   62 (144)
                      .+|.++++|.|++|++.|.....|..|++.|.+.++|.|.+|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            5 SSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             cCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            455666666666666666666666666666666666666554

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=6e-12  Score=63.11  Aligned_cols=42  Identities=38%  Similarity=0.538  Sum_probs=30.0

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVC   62 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C   62 (144)
                      .+|.++++|.|..|++.|.....|..|++.|.+.++|.|.+|
T Consensus         3 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            3 SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            456677777777777777777777777777777777777655

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.16  E-value=4.9e-11  Score=60.29  Aligned_cols=42  Identities=36%  Similarity=0.640  Sum_probs=31.9

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVC   62 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C   62 (144)
                      .+|.++++|.|++|++.|.....|..|++.|.+.++|.|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            5 SSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            467777777887788777777777777777777777777665

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=8.7e-12  Score=63.07  Aligned_cols=42  Identities=36%  Similarity=0.604  Sum_probs=26.8

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVC   62 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C   62 (144)
                      .+|.++++|.|..|++.|.....|..|++.|.+.++|.|.+|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            5 SSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             cccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            455666666666666666666666666666666666666554

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=4.3e-11  Score=60.46  Aligned_cols=44  Identities=23%  Similarity=0.286  Sum_probs=41.3

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAAC   90 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   90 (144)
                      |++.|.+.++|.|..|++.|.....|..|++.|+++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            56678899999999999999999999999999999999999987

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1e-11  Score=62.83  Aligned_cols=42  Identities=36%  Similarity=0.536  Sum_probs=25.5

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVC   62 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C   62 (144)
                      .+|.++++|.|++|++.|.....|..|++.|.+.++|.|.+|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            5 SSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            455566666666666666666666666666666666666554

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=7.2e-12  Score=63.38  Aligned_cols=42  Identities=38%  Similarity=0.614  Sum_probs=30.3

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVC   62 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C   62 (144)
                      .+|.++++|.|..|++.|.....|..|++.|.+.++|.|.+|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            5 SSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            456677777777777777777777777777777777777665

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=3.6e-11  Score=60.76  Aligned_cols=43  Identities=42%  Similarity=0.644  Sum_probs=30.1

Q ss_pred             ccccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccc
Q psy6676          20 GYIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVC   62 (144)
Q Consensus        20 ~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C   62 (144)
                      ..+|.++++|.|..|++.|.....|..|++.|.+.++|.|.+|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            4 GSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            3556677777777777777777777777777777777777655

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.16  E-value=8.1e-12  Score=63.27  Aligned_cols=44  Identities=27%  Similarity=0.424  Sum_probs=37.1

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAAC   90 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   90 (144)
                      |++.|.+.++|.|.+|++.|.....|..|++.|+++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45667788888888888888888888888888888888888876

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=8.2e-12  Score=63.22  Aligned_cols=42  Identities=40%  Similarity=0.713  Sum_probs=26.6

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVC   62 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C   62 (144)
                      .+|.++++|.|+.|++.|.....|..|++.|.+.++|.|.+|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            5 SSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            455666666666666666666666666666666666666554

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=8.7e-12  Score=63.14  Aligned_cols=42  Identities=33%  Similarity=0.635  Sum_probs=28.7

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVC   62 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C   62 (144)
                      ++|.++++|.|+.|++.|.....|..|++.|.+.++|.|.+|
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            5 SSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             SCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            456667777777777777777777777666666666666655

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=9.2e-12  Score=62.99  Aligned_cols=42  Identities=31%  Similarity=0.544  Sum_probs=30.3

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVC   62 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C   62 (144)
                      .+|.++++|.|+.|++.|.....|..|++.|.+.++|.|.+|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            5 SSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            456677777777777777777777777777777777777665

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=8e-12  Score=63.26  Aligned_cols=42  Identities=38%  Similarity=0.661  Sum_probs=26.6

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVC   62 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C   62 (144)
                      .+|.++++|.|+.|++.|.....|..|++.|.+.++|.|.+|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            5 SSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             cCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            455666666666666666666666666666666666666554

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=3.8e-11  Score=60.08  Aligned_cols=44  Identities=27%  Similarity=0.446  Sum_probs=40.7

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAAC   90 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   90 (144)
                      |++.|.+.++|.|..|++.|.....|..|++.|+++++|.|..|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34568889999999999999999999999999999999999987

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=3.7e-11  Score=60.74  Aligned_cols=44  Identities=27%  Similarity=0.375  Sum_probs=41.0

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAAC   90 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   90 (144)
                      |++.|.+.++|.|..|++.|.....|..|++.|.++++|.|..|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            45678889999999999999999999999999999999999987

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=9.6e-12  Score=62.91  Aligned_cols=42  Identities=36%  Similarity=0.643  Sum_probs=26.2

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVC   62 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C   62 (144)
                      .+|.++++|.|+.|++.|.....|..|++.|.+.++|.|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            5 SSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             ccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            455666666666666666666666666666666666666554

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=4.3e-11  Score=60.44  Aligned_cols=44  Identities=34%  Similarity=0.469  Sum_probs=41.4

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAAC   90 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   90 (144)
                      |++.|.+.++|.|..|++.|.....|..|++.|.++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56678899999999999999999999999999999999999987

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=5.7e-11  Score=59.98  Aligned_cols=44  Identities=27%  Similarity=0.383  Sum_probs=41.2

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAAC   90 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   90 (144)
                      |++.|.+.++|.|.+|++.|.....|..|++.|.++++|.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            56678889999999999999999999999999999999999987

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=9.1e-12  Score=63.04  Aligned_cols=42  Identities=33%  Similarity=0.628  Sum_probs=28.3

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVC   62 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C   62 (144)
                      .+|.++++|.|+.|++.|.....|..|++.|.+.++|.|.+|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            5 SSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            456666677777777777776667777666666666666654

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=5.3e-11  Score=60.12  Aligned_cols=44  Identities=34%  Similarity=0.539  Sum_probs=41.1

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAAC   90 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   90 (144)
                      |++.|.+.++|.|.+|++.|.....|..|++.|+++++|.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            55678889999999999999999999999999999999999987

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.15  E-value=7.8e-12  Score=63.30  Aligned_cols=42  Identities=33%  Similarity=0.575  Sum_probs=28.0

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVC   62 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C   62 (144)
                      .+|.++++|.|..|++.|.....|..|++.|.+.++|.|.+|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            5 SSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             cCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            456666667777777776666666666666666666666654

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=4e-11  Score=60.59  Aligned_cols=44  Identities=27%  Similarity=0.494  Sum_probs=41.3

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAAC   90 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   90 (144)
                      |++.|.+.++|.|.+|++.|.....|..|++.|+++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             ccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            56678899999999999999999999999999999999999987

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=4.5e-11  Score=60.40  Aligned_cols=43  Identities=33%  Similarity=0.536  Sum_probs=32.0

Q ss_pred             ccccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccc
Q psy6676          20 GYIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVC   62 (144)
Q Consensus        20 ~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C   62 (144)
                      ..+|.++++|.|..|++.|.....|..|++.|.+.++|.|..|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            4 GSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             ccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3567777777777777777777777777777777777777665

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.15  E-value=9.5e-12  Score=62.94  Aligned_cols=42  Identities=33%  Similarity=0.559  Sum_probs=25.1

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVC   62 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C   62 (144)
                      .+|.++++|.|+.|++.|.....|..|++.|.+.++|.|.+|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            5 SSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            345556666666666666666666666666665556665544

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=4e-11  Score=60.58  Aligned_cols=42  Identities=31%  Similarity=0.567  Sum_probs=31.3

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVC   62 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C   62 (144)
                      .+|.++++|.|..|++.|.....|..|++.|.+.++|.|.+|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            5 SSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            466777777777777777777777777777777777777665

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=5.5e-13  Score=80.66  Aligned_cols=71  Identities=14%  Similarity=0.143  Sum_probs=61.7

Q ss_pred             HHHHHHHHhCCCCCcccccccccccCchHHHHHHhh--cCCCCCcc-cCcchhhh--cChHHHHHhHhhccCCCCC
Q psy6676          43 TLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLT--HTDIKPYN-CAACGKVF--RRNCDLRRHSLTHNLGSAT  113 (144)
Q Consensus        43 ~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~--h~~~~~~~-C~~C~~~f--~~~~~l~~H~~~h~~~~~~  113 (144)
                      .|..|++.|.+.++|.|..|++.|.....|..|++.  |.+.+++. |..|++.|  .....|..|+++|..+.+.
T Consensus         6 ~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~   81 (115)
T 2dmi_A            6 SGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVL   81 (115)
T ss_dssp             CCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSC
T ss_pred             hhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcce
Confidence            466778889999999999999999999999999998  77777655 99999999  8999999999998866543

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=7.3e-12  Score=63.39  Aligned_cols=42  Identities=40%  Similarity=0.599  Sum_probs=30.2

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVC   62 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C   62 (144)
                      .+|.++++|.|+.|++.|.....|..|++.|.+.++|.|.+|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            5 SSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             ccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            456677777777777777777777777777777777777655

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=1.2e-11  Score=62.63  Aligned_cols=42  Identities=43%  Similarity=0.660  Sum_probs=23.7

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVC   62 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C   62 (144)
                      .+|.++++|.|..|++.|.....|..|++.|.+.++|.|..|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            5 SSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             TCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             cCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            345555555555555555555555555555555555555544

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=7.9e-12  Score=63.29  Aligned_cols=42  Identities=31%  Similarity=0.533  Sum_probs=26.5

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVC   62 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C   62 (144)
                      .+|.++++|.|++|++.|.....|..|++.|.+.++|.|.+|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            5 SSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            455666666666666666666666666666666666666554

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=8.8e-12  Score=63.10  Aligned_cols=42  Identities=36%  Similarity=0.604  Sum_probs=30.1

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVC   62 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C   62 (144)
                      .+|.++++|.|..|++.|.....|..|++.|.+.++|.|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            5 SSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             cccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            456677777777777777777777777777777777777655

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=4.4e-11  Score=60.50  Aligned_cols=42  Identities=33%  Similarity=0.597  Sum_probs=32.7

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVC   62 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C   62 (144)
                      .+|.++++|.|..|++.|.....|..|++.|.+.++|.|.+|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            5 SSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             CCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             cCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            567777888888888888888888888877777777777765

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=4.6e-11  Score=60.32  Aligned_cols=44  Identities=32%  Similarity=0.483  Sum_probs=41.3

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAAC   90 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   90 (144)
                      |++.|.+.++|.|.+|++.|.....|..|++.|.++++|.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56678899999999999999999999999999999999999987

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=4.2e-11  Score=60.50  Aligned_cols=44  Identities=32%  Similarity=0.443  Sum_probs=41.2

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAAC   90 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   90 (144)
                      |++.|.+.++|.|..|++.|.....|..|++.|+++++|.|.+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            55678889999999999999999999999999999999999987

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=7.7e-12  Score=63.31  Aligned_cols=44  Identities=25%  Similarity=0.425  Sum_probs=37.5

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAAC   90 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   90 (144)
                      |++.|.+.++|.|.+|++.|.....|..|++.|.++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            45667788889999999999888899999888888888888876

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=4.9e-11  Score=60.24  Aligned_cols=44  Identities=25%  Similarity=0.463  Sum_probs=41.2

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAAC   90 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   90 (144)
                      |++.|.+.++|.|.+|++.|.....|..|++.|+++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            55678899999999999999999999999999999999999987

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.15  E-value=4.2e-11  Score=60.50  Aligned_cols=44  Identities=27%  Similarity=0.383  Sum_probs=41.3

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAAC   90 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   90 (144)
                      |++.|.+.++|.|..|++.|.....|..|++.|+++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            56678899999999999999999999999999999999999987

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=1.1e-11  Score=62.67  Aligned_cols=44  Identities=25%  Similarity=0.385  Sum_probs=38.0

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAAC   90 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   90 (144)
                      |++.|.+.++|.|.+|++.|.....|..|++.|+++++|.|..|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            45567888889999999999999999999999999999999877

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=3.7e-11  Score=60.70  Aligned_cols=44  Identities=30%  Similarity=0.405  Sum_probs=41.3

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAAC   90 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   90 (144)
                      |++.|.+.++|.|.+|++.|.....|..|++.|+++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             cccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            56678899999999999999999999999999999999999987

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=3.9e-11  Score=60.65  Aligned_cols=44  Identities=32%  Similarity=0.454  Sum_probs=41.1

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAAC   90 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   90 (144)
                      |++.|.+.++|.|.+|++.|.....|..|++.|+++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45678889999999999999999999999999999999999987

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=3.9e-11  Score=60.66  Aligned_cols=43  Identities=37%  Similarity=0.611  Sum_probs=34.5

Q ss_pred             ccccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccc
Q psy6676          20 GYIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVC   62 (144)
Q Consensus        20 ~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C   62 (144)
                      .++|.++++|.|+.|++.|.....|..|++.|.+.++|.|.+|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            4 GSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            3567788888888888888888888888888888888888765

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=5.1e-11  Score=60.17  Aligned_cols=44  Identities=32%  Similarity=0.436  Sum_probs=41.4

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAAC   90 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   90 (144)
                      |++.|.+.++|.|..|++.|.....|..|++.|+++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             SSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             cccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56778999999999999999999999999999999999999987

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=4.7e-11  Score=60.33  Aligned_cols=44  Identities=25%  Similarity=0.386  Sum_probs=41.1

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAAC   90 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   90 (144)
                      |++.|.+.++|.|.+|++.|.....|..|++.|+++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45678889999999999999999999999999999999999987

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.14  E-value=5e-11  Score=69.46  Aligned_cols=57  Identities=25%  Similarity=0.377  Sum_probs=52.2

Q ss_pred             CcccccccccccCchHHHHHHhh-cCCCCC--------cccCcchhhhcChHHHHHhHhhccCCCC
Q psy6676          56 PHKCPVCSRSFNQRSNLKTHLLT-HTDIKP--------YNCAACGKVFRRNCDLRRHSLTHNLGSA  112 (144)
Q Consensus        56 ~~~C~~C~~~~~~~~~l~~h~~~-h~~~~~--------~~C~~C~~~f~~~~~l~~H~~~h~~~~~  112 (144)
                      .+.|..|++.|.....|..|++. |.++++        |.|..|++.|.....|..|+++|+.+.+
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   90 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKS   90 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCC
T ss_pred             CCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCC
Confidence            46899999999999999999998 888887        9999999999999999999999987654

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.14  E-value=4.7e-11  Score=60.37  Aligned_cols=42  Identities=29%  Similarity=0.525  Sum_probs=29.3

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVC   62 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C   62 (144)
                      .+|.++++|.|++|++.|.....|..|++.|.+.++|.|.+|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            5 SSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            556677777777777777777777777777776666766655

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=4.5e-11  Score=60.35  Aligned_cols=44  Identities=32%  Similarity=0.446  Sum_probs=41.3

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAAC   90 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   90 (144)
                      |++.|.+.++|.|.+|++.|.....|..|++.|.++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            56678899999999999999999999999999999999999987

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=4.2e-11  Score=60.51  Aligned_cols=42  Identities=31%  Similarity=0.608  Sum_probs=32.1

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVC   62 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C   62 (144)
                      .+|.++++|.|..|++.|.....|..|++.|.+.++|.|.+|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            5 SSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             cccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            467777778888888888777777777777777777777765

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=5.1e-11  Score=60.17  Aligned_cols=44  Identities=30%  Similarity=0.434  Sum_probs=41.2

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAAC   90 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   90 (144)
                      |++.|.+.++|.|.+|++.|.....|..|++.|+++++|.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56678899999999999999999999999999999999999987

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=8.4e-12  Score=63.17  Aligned_cols=41  Identities=39%  Similarity=0.644  Sum_probs=20.6

Q ss_pred             ccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccc
Q psy6676          22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVC   62 (144)
Q Consensus        22 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C   62 (144)
                      +|.++++|.|++|++.|.....|..|++.|.+.++|.|.+|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            6 SGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44455555555555555555555555555554445554443

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=9.2e-12  Score=63.01  Aligned_cols=42  Identities=33%  Similarity=0.634  Sum_probs=26.4

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVC   62 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C   62 (144)
                      .+|.++++|.|+.|++.|.....|..|++.|.+.++|.|.+|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            5 SSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             cCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            455666666666666666666666666666666666666554

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.14  E-value=4.2e-11  Score=60.51  Aligned_cols=44  Identities=27%  Similarity=0.366  Sum_probs=41.3

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAAC   90 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   90 (144)
                      |++.|.+.++|.|..|++.|.....|..|++.|.++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            56678899999999999999999999999999999999999987

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=1e-11  Score=62.81  Aligned_cols=42  Identities=33%  Similarity=0.559  Sum_probs=26.6

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVC   62 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C   62 (144)
                      .+|.++++|.|+.|++.|.....|..|++.|.+.++|.|..|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            5 SSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             ccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            455666666666666666666666666666666666666554

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=5.3e-11  Score=60.13  Aligned_cols=44  Identities=30%  Similarity=0.509  Sum_probs=41.3

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAAC   90 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   90 (144)
                      |++.|.+.++|.|.+|++.|.....|..|++.|+++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56678899999999999999999999999999999999999987

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=6.9e-12  Score=63.50  Aligned_cols=42  Identities=31%  Similarity=0.568  Sum_probs=30.5

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVC   62 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C   62 (144)
                      .+|.++++|.|..|++.|.....|..|++.|.+.++|.|.+|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            5 SSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            456777777777777777777777777777777777777665

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=4.6e-11  Score=60.35  Aligned_cols=42  Identities=38%  Similarity=0.608  Sum_probs=31.7

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVC   62 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C   62 (144)
                      .+|.++++|.|.+|++.|.....|..|++.|.+.++|.|.+|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            5 SSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            567777777777777777777777777777777777777665

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=4.2e-11  Score=60.51  Aligned_cols=44  Identities=34%  Similarity=0.484  Sum_probs=41.2

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAAC   90 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   90 (144)
                      |++.|.+.++|.|.+|++.|.....|..|++.|.++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            56678899999999999999999999999999999999999987

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.13  E-value=3.8e-11  Score=60.62  Aligned_cols=44  Identities=25%  Similarity=0.430  Sum_probs=41.3

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAAC   90 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   90 (144)
                      |++.|.+.++|.|..|++.|.....|..|++.|+++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             cccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56678899999999999999999999999999999999999987

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=4e-11  Score=60.60  Aligned_cols=44  Identities=23%  Similarity=0.364  Sum_probs=41.2

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAAC   90 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   90 (144)
                      |++.|.+.++|.|..|++.|.....|..|++.|.++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56678899999999999999999999999999999999999987

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=7.5e-12  Score=63.35  Aligned_cols=44  Identities=27%  Similarity=0.381  Sum_probs=37.1

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAAC   90 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   90 (144)
                      |++.|.+.++|.|.+|++.|.....|..|++.|+++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             cccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            55667788888888888888888888888888888888888876

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.13  E-value=1.5e-11  Score=62.21  Aligned_cols=44  Identities=27%  Similarity=0.374  Sum_probs=37.7

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAAC   90 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   90 (144)
                      |++.|.+.++|.|.+|++.|.....|..|++.|+++++|.|..|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34567788889999999999999999999999999999998877

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=6e-11  Score=59.90  Aligned_cols=44  Identities=25%  Similarity=0.357  Sum_probs=41.4

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAAC   90 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   90 (144)
                      |++.|.+.++|.|.+|++.|.....|..|++.|.++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            56678899999999999999999999999999999999999987

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.13  E-value=1.2e-11  Score=62.55  Aligned_cols=44  Identities=23%  Similarity=0.270  Sum_probs=37.9

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAAC   90 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   90 (144)
                      |++.|.+.++|.|.+|++.|.....|..|++.|+++++|.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45567888889999999999999999999999999999998877

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=5e-11  Score=60.26  Aligned_cols=42  Identities=31%  Similarity=0.504  Sum_probs=32.1

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVC   62 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C   62 (144)
                      .+|.++++|.|+.|++.|.....|..|++.|.+.++|.|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            5 SSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            567777778888888888777777777777777777777765

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=4.8e-11  Score=60.29  Aligned_cols=44  Identities=32%  Similarity=0.468  Sum_probs=41.1

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAAC   90 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   90 (144)
                      |++.|.+.++|.|..|++.|.....|..|++.|.++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            55678889999999999999999999999999999999999987

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=5.7e-11  Score=59.97  Aligned_cols=44  Identities=30%  Similarity=0.369  Sum_probs=41.2

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAAC   90 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   90 (144)
                      |++.|.+.++|.|.+|++.|.....|..|++.|+++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             CcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            55678899999999999999999999999999999999999987

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1e-11  Score=62.86  Aligned_cols=44  Identities=25%  Similarity=0.382  Sum_probs=36.2

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAAC   90 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   90 (144)
                      |++.|.+.++|.|.+|++.|.....|..|++.|.++++|.|..|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44567778888888888888888888888888888888888876

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=8.2e-12  Score=63.24  Aligned_cols=44  Identities=25%  Similarity=0.341  Sum_probs=36.2

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAAC   90 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   90 (144)
                      |++.|.+.++|.|..|++.|.....|..|++.|+++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            45567778888888888888888888888888888888888776

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.12  E-value=2.3e-11  Score=69.32  Aligned_cols=54  Identities=33%  Similarity=0.683  Sum_probs=51.3

Q ss_pred             Cccc--ccccccccCchHHHHHHhhcCCCCCcccCc--chhhhcChHHHHHhHhhccC
Q psy6676          56 PHKC--PVCSRSFNQRSNLKTHLLTHTDIKPYNCAA--CGKVFRRNCDLRRHSLTHNL  109 (144)
Q Consensus        56 ~~~C--~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~  109 (144)
                      ||.|  ..|++.|.....|..|++.|.++++|.|..  |++.|.....|..|+++|+.
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~   58 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG   58 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC
Confidence            5789  889999999999999999999999999988  99999999999999999886

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=5.2e-11  Score=60.20  Aligned_cols=44  Identities=27%  Similarity=0.422  Sum_probs=41.2

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAAC   90 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   90 (144)
                      |++.|.+.++|.|.+|++.|.....|..|++.|+++++|.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56678889999999999999999999999999999999999987

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.12  E-value=5.3e-11  Score=60.09  Aligned_cols=44  Identities=27%  Similarity=0.357  Sum_probs=41.3

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAAC   90 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   90 (144)
                      |++.|.+.++|.|.+|++.|.....|..|++.|.++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            56678899999999999999999999999999999999999987

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=8.2e-12  Score=63.20  Aligned_cols=42  Identities=38%  Similarity=0.615  Sum_probs=29.0

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVC   62 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C   62 (144)
                      .+|.++++|.|+.|++.|.....|..|++.|.+.++|.|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            5 SSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             cCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            456667777777777777777777777777766666766655

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.5e-11  Score=62.24  Aligned_cols=41  Identities=34%  Similarity=0.672  Sum_probs=25.6

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCccccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPV   61 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~   61 (144)
                      .+|.++++|.|..|++.|.....|..|++.|.+.++|.|.+
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ep3_A            5 SSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             SSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTC
T ss_pred             CCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            45566666666666666666666666666666666666654

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.1e-11  Score=62.66  Aligned_cols=44  Identities=32%  Similarity=0.438  Sum_probs=37.7

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAAC   90 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   90 (144)
                      |++.|.+.++|.|.+|++.|.....|..|++.|+++++|.|..|
T Consensus         3 h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            45567888889999999999999999999988988899988877

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=4.8e-11  Score=60.30  Aligned_cols=44  Identities=27%  Similarity=0.446  Sum_probs=41.1

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAAC   90 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   90 (144)
                      |++.|.+.++|.|..|++.|.....|..|++.|+++++|.|..|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            45678889999999999999999999999999999999999987

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=4.2e-11  Score=60.50  Aligned_cols=44  Identities=32%  Similarity=0.420  Sum_probs=41.2

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAAC   90 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   90 (144)
                      |++.|.+.++|.|.+|++.|.....|..|++.|+++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             cCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            55678899999999999999999999999999999999999987

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2e-11  Score=61.97  Aligned_cols=42  Identities=33%  Similarity=0.558  Sum_probs=27.9

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHH-HhCCCCCcccccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKI-LHLEESPHKCPVC   62 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~-~~~~~~~~~C~~C   62 (144)
                      ++|.++++|.|.+|++.|.....|..|++ .|.+.++|.|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            5 SSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             cccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            45666666777777777766666666666 6666666666654

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.11  E-value=6.4e-11  Score=59.79  Aligned_cols=44  Identities=23%  Similarity=0.266  Sum_probs=41.2

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAAC   90 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   90 (144)
                      |++.|.+.++|.|.+|++.|.....|..|++.|+++++|.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             ccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            55678889999999999999999999999999999999999987

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=8.5e-11  Score=59.56  Aligned_cols=44  Identities=25%  Similarity=0.355  Sum_probs=41.1

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHh-hcCCCCCcccCcc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLL-THTDIKPYNCAAC   90 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~-~h~~~~~~~C~~C   90 (144)
                      |++.|.+.++|.|.+|++.|.....|..|++ .|.++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            5567889999999999999999999999999 9999999999987

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=5e-11  Score=60.24  Aligned_cols=43  Identities=40%  Similarity=0.651  Sum_probs=34.3

Q ss_pred             ccccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccc
Q psy6676          20 GYIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVC   62 (144)
Q Consensus        20 ~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C   62 (144)
                      ..+|.++++|.|.+|++.|.....|..|++.|.+.++|.|.+|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3567788888888888888888888888888887788888765

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=1e-10  Score=59.08  Aligned_cols=43  Identities=47%  Similarity=0.681  Sum_probs=31.9

Q ss_pred             ccccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccc
Q psy6676          20 GYIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVC   62 (144)
Q Consensus        20 ~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C   62 (144)
                      ..+|.++++|.|..|++.|.....|..|++.|.+.++|.|.+|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            4 GSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3567777777787777777777777777777777777777653

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=6.4e-11  Score=59.81  Aligned_cols=43  Identities=35%  Similarity=0.596  Sum_probs=31.4

Q ss_pred             ccccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccc
Q psy6676          20 GYIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVC   62 (144)
Q Consensus        20 ~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C   62 (144)
                      ..+|.++++|.|.+|++.|.....|..|++.|.+.++|.|.+|
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            4 GSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            3566777777777777777777777777777777777777665

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=6.3e-11  Score=59.83  Aligned_cols=44  Identities=32%  Similarity=0.474  Sum_probs=41.5

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAAC   90 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   90 (144)
                      |++.|.+.++|.|.+|++.|.....|..|++.|+++++|.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             STTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             cccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56778999999999999999999999999999999999999987

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.10  E-value=5.2e-11  Score=60.81  Aligned_cols=41  Identities=32%  Similarity=0.429  Sum_probs=20.3

Q ss_pred             cCCCCcccccccccccCChHHHHHHHHHhCCCCCccccccc
Q psy6676          23 HSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCS   63 (144)
Q Consensus        23 h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~   63 (144)
                      +.++++|.|.+|++.|.....|..|++.|.+.++|.|.+|+
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~   47 (48)
T 2epr_A            7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS   47 (48)
T ss_dssp             CCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCC
Confidence            33444555555555555555555555555444445554443

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=8.7e-11  Score=59.32  Aligned_cols=44  Identities=34%  Similarity=0.493  Sum_probs=40.9

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAAC   90 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   90 (144)
                      |++.|.+.++|.|..|++.|.....|..|++.|+++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56678899999999999999999999999999999999999875

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=2.4e-11  Score=61.47  Aligned_cols=44  Identities=32%  Similarity=0.485  Sum_probs=34.8

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAAC   90 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   90 (144)
                      |++.|.+.++|.|.+|++.|.....|..|++.|+++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44567777888888888888888888888888888888888764

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=1.5e-11  Score=62.27  Aligned_cols=44  Identities=25%  Similarity=0.340  Sum_probs=36.4

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAAC   90 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   90 (144)
                      |++.|.+.++|.|.+|++.|.....|..|++.|.++++|.|..|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            34567778888888888888888888888888888888888876

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=5e-11  Score=60.23  Aligned_cols=44  Identities=34%  Similarity=0.498  Sum_probs=41.2

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAAC   90 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   90 (144)
                      |++.|.+.++|.|.+|++.|.....|..|++.|.++++|.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            55678889999999999999999999999999999999999987

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.07  E-value=7.9e-11  Score=60.11  Aligned_cols=42  Identities=24%  Similarity=0.519  Sum_probs=39.5

Q ss_pred             hCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcchh
Q psy6676          51 HLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGK   92 (144)
Q Consensus        51 ~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~   92 (144)
                      +.+.++|.|.+|++.|.....|..|++.|+++++|.|.+|++
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            566789999999999999999999999999999999999985

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.06  E-value=8.3e-11  Score=59.13  Aligned_cols=42  Identities=24%  Similarity=0.481  Sum_probs=38.3

Q ss_pred             HhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcch
Q psy6676          50 LHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACG   91 (144)
Q Consensus        50 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~   91 (144)
                      .|.+.++|.|..|++.|.....|..|++.|+++++|.|+.||
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            467788999999999999999999999999999999999986

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.04  E-value=6e-13  Score=72.03  Aligned_cols=45  Identities=16%  Similarity=0.448  Sum_probs=25.4

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccccccccC
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQ   68 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~   68 (144)
                      .+|.+++||.|+.|++.|.....|.   +.|.+.++|.|..|++.|..
T Consensus         7 ~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~   51 (62)
T 1vd4_A            7 RDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEE   51 (62)
T ss_dssp             SSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEE
T ss_pred             HHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCcccc
Confidence            4556666666666666665554443   44555555555555555544

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=2.8e-13  Score=75.27  Aligned_cols=63  Identities=22%  Similarity=0.359  Sum_probs=54.8

Q ss_pred             HHHHHHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcchhhhcChHHHHHhHhhccCCCC
Q psy6676          43 TLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTHNLGSA  112 (144)
Q Consensus        43 ~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  112 (144)
                      .|..|++.|.+.++|.|.+|++.|.....|..       +++|.|..|++.|.....|..|+++|+.+.+
T Consensus         5 ~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~   67 (73)
T 2ctu_A            5 SSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGKKT   67 (73)
T ss_dssp             SCCCCCCCCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCC
T ss_pred             hHHHHHHHhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCC
Confidence            45667788999999999999999988877655       6899999999999999999999999876543

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.03  E-value=2.9e-10  Score=57.34  Aligned_cols=41  Identities=41%  Similarity=0.707  Sum_probs=31.7

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCccccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPV   61 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~   61 (144)
                      .+|.++++|.|+.|++.|.....|..|++.|.+.++|.|.+
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            5 SSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            56777788888888888888888888887787777777753

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=3.5e-10  Score=57.02  Aligned_cols=41  Identities=39%  Similarity=0.603  Sum_probs=32.3

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCccccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPV   61 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~   61 (144)
                      .+|.++++|.|..|++.|.....|..|++.|.+.++|.|.+
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            5 SSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            56777888888888888888888888888888777777753

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=2.9e-10  Score=57.36  Aligned_cols=42  Identities=31%  Similarity=0.633  Sum_probs=32.1

Q ss_pred             ccccCCCCcccccccccccCChHHHHHHHHHhCCCCCccccc
Q psy6676          20 GYIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPV   61 (144)
Q Consensus        20 ~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~   61 (144)
                      ..+|.++++|.|..|++.|.....|..|++.|.+.++|.|.+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            4 GSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             ccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            356777788888888888888888888888887777777753

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.02  E-value=7.3e-11  Score=58.39  Aligned_cols=39  Identities=36%  Similarity=0.607  Sum_probs=24.1

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC   59 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C   59 (144)
                      .+|.++++|.|+.|++.|.....|..|++.|.+.++|.|
T Consensus         3 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2el5_A            3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS   41 (42)
T ss_dssp             SSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCC
T ss_pred             CCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            345566666666666666666666666666666666555

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=2.4e-10  Score=57.67  Aligned_cols=40  Identities=38%  Similarity=0.615  Sum_probs=28.5

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCP   60 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~   60 (144)
                      .+|.++++|.|.+|++.|.....|..|++.|.+.++|.|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            5 SSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             SSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            5566777777777777777777777777777776777665

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=8.8e-11  Score=59.29  Aligned_cols=40  Identities=38%  Similarity=0.692  Sum_probs=25.1

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCP   60 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~   60 (144)
                      .+|.++++|.|..|++.|.....|..|++.|.+.++|.|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq2_A            5 SSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred             cccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            4556666666666666666666666666666666666654

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=3.3e-10  Score=57.12  Aligned_cols=40  Identities=40%  Similarity=0.679  Sum_probs=28.9

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCP   60 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~   60 (144)
                      .+|.++++|.|+.|++.|.....|..|++.|.+.++|.|.
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enf_A            5 SSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCS
T ss_pred             cCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCC
Confidence            4566777777777777777777777777777777777765

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=8.4e-11  Score=59.37  Aligned_cols=43  Identities=33%  Similarity=0.427  Sum_probs=30.8

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAA   89 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~   89 (144)
                      |++.|.+.++|.|..|++.|.....|..|++.|+++++|.|.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            3455666777777777777777777777777777777777753

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=8.2e-11  Score=59.40  Aligned_cols=40  Identities=35%  Similarity=0.669  Sum_probs=26.4

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCP   60 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~   60 (144)
                      .+|.++++|.|..|++.|.....|..|++.|.+.++|.|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A            5 SSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4566666666666666666666666666666666666664

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=3.6e-10  Score=56.94  Aligned_cols=43  Identities=26%  Similarity=0.453  Sum_probs=39.6

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAA   89 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~   89 (144)
                      |++.|.+.++|.|.+|++.|.....|..|++.|+++++|.|.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5567888999999999999999999999999999999999974

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=3.7e-10  Score=56.87  Aligned_cols=41  Identities=39%  Similarity=0.694  Sum_probs=31.4

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCccccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPV   61 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~   61 (144)
                      .+|.++++|.|..|++.|.....|..|++.|.+.++|.|.+
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            5 SSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             CCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            46777788888888888888888888877777777777753

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=3.5e-10  Score=57.00  Aligned_cols=40  Identities=43%  Similarity=0.698  Sum_probs=29.4

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCP   60 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~   60 (144)
                      .+|.++++|.|+.|++.|.....|..|++.|.+.++|.|.
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yti_A            5 SSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred             cCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCC
Confidence            4567777777777777777777777777777777777765

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.01  E-value=4.4e-10  Score=55.88  Aligned_cols=40  Identities=20%  Similarity=0.336  Sum_probs=31.3

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCP   60 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~   60 (144)
                      ++|.++++|.|..|++.|.....|..|++.|.+.++|.|.
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            4567778888888888888888888888888777777775

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=5.3e-10  Score=55.13  Aligned_cols=39  Identities=31%  Similarity=0.546  Sum_probs=29.1

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC   59 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C   59 (144)
                      .+|.++++|.|+.|++.|.....|..|++.|.+.++|.|
T Consensus         3 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            3 SGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             SSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             cCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            456777777777777777777777777777777777766

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=4.8e-10  Score=56.50  Aligned_cols=41  Identities=37%  Similarity=0.559  Sum_probs=29.5

Q ss_pred             ccccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccc
Q psy6676          20 GYIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCP   60 (144)
Q Consensus        20 ~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~   60 (144)
                      ..+|.++++|.|.+|++.|.....|..|++.|.+.++|.|.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            4 GSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            35667777777777777777777777777777777777765

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=9.8e-11  Score=59.08  Aligned_cols=40  Identities=35%  Similarity=0.727  Sum_probs=27.0

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCP   60 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~   60 (144)
                      .+|.+.++|.|..|++.|.....|..|++.|.+.++|.|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep1_A            5 SSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred             cCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4566666777777777777776677776666666666665

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=8.6e-11  Score=59.32  Aligned_cols=42  Identities=33%  Similarity=0.439  Sum_probs=30.2

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccC
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCA   88 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~   88 (144)
                      |++.|.+.++|.|..|++.|.....|..|++.|+++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yti_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred             CCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCC
Confidence            345566677777777777777777777777777777777775

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=4.2e-10  Score=56.72  Aligned_cols=41  Identities=34%  Similarity=0.561  Sum_probs=31.3

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCccccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPV   61 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~   61 (144)
                      .+|.++++|.|..|++.|.....|..|++.|.+.++|.|.+
T Consensus         5 ~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            5 SSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            46777778888888888888877888877777777777753

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=9.9e-11  Score=59.12  Aligned_cols=41  Identities=22%  Similarity=0.336  Sum_probs=27.9

Q ss_pred             HHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccC
Q psy6676          48 KILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCA   88 (144)
Q Consensus        48 ~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~   88 (144)
                      ++.|.+.++|.|.+|++.|.....|..|++.|+++++|.|.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            4 GSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            44566666777777777777777777777777777777665

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.01  E-value=4.8e-10  Score=56.54  Aligned_cols=41  Identities=27%  Similarity=0.499  Sum_probs=33.5

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCccccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPV   61 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~   61 (144)
                      .+|.++++|.|..|++.|.....|..|++.|.+.++|.|.+
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            5 SSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            56778888888888888888888888888888888888753

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=4.7e-10  Score=56.48  Aligned_cols=43  Identities=28%  Similarity=0.441  Sum_probs=39.8

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAA   89 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~   89 (144)
                      |++.|.+.++|.|..|++.|.....|..|++.|.++++|.|.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             cccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5667888999999999999999999999999999999999974

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.1e-10  Score=59.01  Aligned_cols=40  Identities=43%  Similarity=0.701  Sum_probs=24.8

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCP   60 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~   60 (144)
                      .+|.++++|.|+.|++.|.....|..|++.|.+.++|.|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            5 SSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             SCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             cCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            3555666666666666666666666666666666666654

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.01  E-value=7.2e-11  Score=59.64  Aligned_cols=42  Identities=33%  Similarity=0.477  Sum_probs=28.8

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccC
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCA   88 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~   88 (144)
                      |++.|.+.++|.|..|++.|.....|..|++.|+++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A            3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            344566666777777777777777777777777777777665

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.01  E-value=6.9e-11  Score=59.71  Aligned_cols=42  Identities=26%  Similarity=0.425  Sum_probs=27.7

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccC
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCA   88 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~   88 (144)
                      |++.|.+.++|.|.+|++.|.....|..|++.|+++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            344566666667777777776666677776666666666665

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.00  E-value=4.2e-10  Score=55.54  Aligned_cols=42  Identities=24%  Similarity=0.409  Sum_probs=38.4

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccC
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCA   88 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~   88 (144)
                      |++.|.+.++|.|..|++.|.....|..|++.|.++++|.|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            345688899999999999999999999999999999999984

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=3.9e-10  Score=56.83  Aligned_cols=43  Identities=28%  Similarity=0.429  Sum_probs=39.7

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAA   89 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~   89 (144)
                      |++.|.+.++|.|..|++.|.....|..|++.|.++++|.|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             cccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            5567889999999999999999999999999999999999974

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.7e-10  Score=58.22  Aligned_cols=42  Identities=36%  Similarity=0.485  Sum_probs=36.7

Q ss_pred             HHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcc
Q psy6676          49 ILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAAC   90 (144)
Q Consensus        49 ~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   90 (144)
                      +.|.+.++|.|.+|++.|.....|..|++.|.++++|.|..|
T Consensus         5 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            5 SSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            457778889999999999999999999999999999999877

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.00  E-value=4.2e-10  Score=55.50  Aligned_cols=40  Identities=33%  Similarity=0.571  Sum_probs=30.1

Q ss_pred             ccccCCCCcccccccccccCChHHHHHHHHHhCCCCCccc
Q psy6676          20 GYIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC   59 (144)
Q Consensus        20 ~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C   59 (144)
                      ..+|.++++|.|..|++.|.....|..|++.|.+.++|.|
T Consensus         3 ~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            3 SGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            3567777778888888888777777777777777777765

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=4.2e-10  Score=56.69  Aligned_cols=40  Identities=35%  Similarity=0.676  Sum_probs=29.2

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCP   60 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~   60 (144)
                      .+|.++++|.|..|++.|.....|..|++.|.+.++|.|.
T Consensus         5 ~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            5 SSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             cccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            5667777777777777777777777777777777777765

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1e-10  Score=59.10  Aligned_cols=42  Identities=29%  Similarity=0.479  Sum_probs=31.4

Q ss_pred             HHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCc
Q psy6676          48 KILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAA   89 (144)
Q Consensus        48 ~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~   89 (144)
                      ++.|.+.++|.|.+|++.|.....|..|++.|+++++|.|.+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            4 GSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             SSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            445667777788888888877777888877777777777753

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=6.9e-11  Score=59.73  Aligned_cols=42  Identities=31%  Similarity=0.479  Sum_probs=36.3

Q ss_pred             HHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcc
Q psy6676          49 ILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAAC   90 (144)
Q Consensus        49 ~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   90 (144)
                      +.|.+.++|.|.+|++.|.....|..|++.|+++++|.|..|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            5 SSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            457778889999999999999999999998888899998877

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=8.7e-11  Score=59.33  Aligned_cols=40  Identities=33%  Similarity=0.671  Sum_probs=26.2

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCP   60 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~   60 (144)
                      .+|.++++|.|..|++.|.....|..|++.|.+.++|.|.
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            5 SSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             cCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4566666666666666666666666666666666666664

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=4.5e-10  Score=56.61  Aligned_cols=40  Identities=38%  Similarity=0.566  Sum_probs=29.3

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCP   60 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~   60 (144)
                      .+|.++++|.|..|++.|.....|..|++.|.+.++|.|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em6_A            5 SSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS   44 (46)
T ss_dssp             SCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTT
T ss_pred             cccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            4567777777777777777777777777777777777765

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=8.4e-11  Score=59.33  Aligned_cols=42  Identities=33%  Similarity=0.507  Sum_probs=30.0

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccC
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCA   88 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~   88 (144)
                      |++.|.+.++|.|..|++.|.....|..|++.|.++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A            3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             ccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            445566677777777777777777777777777777777775

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1e-10  Score=59.08  Aligned_cols=42  Identities=26%  Similarity=0.368  Sum_probs=28.0

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccC
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCA   88 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~   88 (144)
                      |++.|.+.++|.|.+|++.|.....|..|++.|.++++|.|.
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            344566666677777777777777777777777766666664

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.1e-10  Score=58.95  Aligned_cols=42  Identities=36%  Similarity=0.502  Sum_probs=30.4

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccC
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCA   88 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~   88 (144)
                      |++.|.+.++|.|.+|++.|.....|..|++.|+++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em6_A            3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTT
T ss_pred             CccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            345566677777777777777777777777777777777775

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=9.8e-11  Score=59.08  Aligned_cols=40  Identities=38%  Similarity=0.669  Sum_probs=25.2

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCP   60 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~   60 (144)
                      .+|.+.++|.|+.|++.|.....|..|++.|.+.++|.|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~   44 (46)
T 2yts_A            5 SSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCC
T ss_pred             CCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCC
Confidence            4556666666666666666666666666666666666654

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=9.3e-11  Score=59.16  Aligned_cols=40  Identities=38%  Similarity=0.633  Sum_probs=26.6

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCP   60 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~   60 (144)
                      .+|.+.++|.|+.|++.|.....|..|++.|.+.++|.|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytf_A            5 SSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS   44 (46)
T ss_dssp             CSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCC
T ss_pred             CCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4566666666666666666666666666666666666664

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.3e-10  Score=57.45  Aligned_cols=39  Identities=23%  Similarity=0.322  Sum_probs=25.6

Q ss_pred             HHhCCCCCcccccccccccCchHHHHHHhhcCCCCCccc
Q psy6676          49 ILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNC   87 (144)
Q Consensus        49 ~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C   87 (144)
                      +.|.+.++|.|.+|++.|.....|..|++.|.++++|.|
T Consensus         3 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            3 SGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             SSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             cCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            345566666666666666666666666666666666665

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=3.8e-10  Score=56.90  Aligned_cols=43  Identities=26%  Similarity=0.382  Sum_probs=39.7

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAA   89 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~   89 (144)
                      |++.|.+.++|.|..|++.|.....|..|++.|+++++|.|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             cccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5567889999999999999999999999999999999999974

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=9.1e-11  Score=59.24  Aligned_cols=42  Identities=36%  Similarity=0.558  Sum_probs=29.0

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccC
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCA   88 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~   88 (144)
                      |++.|.+.++|.|.+|++.|.....|..|++.|.++++|.|.
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em3_A            3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            344566666777777777777777777777777777777665

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=4.1e-10  Score=56.72  Aligned_cols=43  Identities=35%  Similarity=0.540  Sum_probs=39.6

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAA   89 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~   89 (144)
                      |++.|.+.++|.|..|++.|.....|..|++.|+++++|.|.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5567888999999999999999999999999999999999974

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.1e-10  Score=58.91  Aligned_cols=40  Identities=38%  Similarity=0.744  Sum_probs=26.0

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCP   60 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~   60 (144)
                      .+|.++++|.|..|++.|.....|..|++.|.+.++|.|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            5 SSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             cccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4566666666666666666666666666666666666664

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=4e-10  Score=56.77  Aligned_cols=41  Identities=34%  Similarity=0.649  Sum_probs=31.8

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCccccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPV   61 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~   61 (144)
                      .+|.++++|.|..|++.|.....|..|++.|.+.++|.|++
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            5 SSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             cCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            56777788888888888888888888888887777777753

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.1e-10  Score=58.90  Aligned_cols=43  Identities=28%  Similarity=0.397  Sum_probs=30.8

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAA   89 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~   89 (144)
                      |++.|.+.++|.|.+|++.|.....|..|++.|+++++|.|.+
T Consensus         3 h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            3445666777777777777777777777777777777777753

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=5.2e-10  Score=56.37  Aligned_cols=43  Identities=30%  Similarity=0.491  Sum_probs=39.7

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAA   89 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~   89 (144)
                      |++.|.+.++|.|..|++.|.....|..|++.|+++++|.|.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             cccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            5567888999999999999999999999999999999999974

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=4.8e-10  Score=56.50  Aligned_cols=40  Identities=33%  Similarity=0.536  Sum_probs=30.5

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCP   60 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~   60 (144)
                      .+|.++++|.|++|++.|.....|..|++.|.+.++|.|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            5 SSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             CCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             ccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4677777788888888887777777777777777777775

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=4e-10  Score=56.21  Aligned_cols=39  Identities=31%  Similarity=0.567  Sum_probs=27.2

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC   59 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C   59 (144)
                      .+|.++++|.|++|++.|.....|..|++.|.+.++|.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eoj_A            5 SSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS   43 (44)
T ss_dssp             CSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCC
T ss_pred             cccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            456667777777777777777777777777766666665

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.98  E-value=7.3e-11  Score=61.79  Aligned_cols=47  Identities=19%  Similarity=0.346  Sum_probs=31.8

Q ss_pred             ccccCchHHHHHHhhcCCCCCcccCcchhhhcChHHHHHhHhhccCC
Q psy6676          64 RSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTHNLG  110 (144)
Q Consensus        64 ~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  110 (144)
                      +.|.....|..|++.|+++++|.|..|++.|.....|..|+++|+.+
T Consensus         4 k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~   50 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFA   50 (54)
T ss_dssp             CCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTT
T ss_pred             cccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            34555555666777777777777777777777777777777776654

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.3e-10  Score=58.04  Aligned_cols=39  Identities=33%  Similarity=0.546  Sum_probs=23.7

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC   59 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C   59 (144)
                      .+|.++++|.|..|++.|.....|..|++.|.+.++|.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2en7_A            5 SSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS   43 (44)
T ss_dssp             CCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCC
T ss_pred             cCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCC
Confidence            345566666666666666666666666666665555555

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=3.9e-10  Score=56.60  Aligned_cols=40  Identities=33%  Similarity=0.624  Sum_probs=30.7

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCP   60 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~   60 (144)
                      .+|.++++|.|..|++.|.....|..|++.|.+.++|.|.
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            5 SSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            4667777888888888888877788887777777777775

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=5.3e-10  Score=56.33  Aligned_cols=43  Identities=35%  Similarity=0.529  Sum_probs=39.7

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAA   89 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~   89 (144)
                      |++.|.+.++|.|..|++.|.....|..|++.|+++++|.|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             cccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5667888999999999999999999999999999999999974

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=3.8e-10  Score=55.44  Aligned_cols=39  Identities=31%  Similarity=0.618  Sum_probs=27.6

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC   59 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C   59 (144)
                      .+|.++++|.|+.|++.|.....|..|++.|.+.++|.|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            456677777777777777777777777777776666665

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=4.3e-10  Score=56.63  Aligned_cols=43  Identities=33%  Similarity=0.440  Sum_probs=39.7

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAA   89 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~   89 (144)
                      |++.|.+.++|.|..|++.|.....|..|++.|+++++|.|.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            5567888999999999999999999999999999999999974

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=8.8e-11  Score=59.26  Aligned_cols=42  Identities=29%  Similarity=0.431  Sum_probs=28.6

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccC
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCA   88 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~   88 (144)
                      |++.|.+.++|.|..|++.|.....|..|++.|+++++|.|.
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A            3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             SSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred             CCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence            344566666777777777777777777777777777777665

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.2e-10  Score=58.72  Aligned_cols=40  Identities=38%  Similarity=0.714  Sum_probs=26.5

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCP   60 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~   60 (144)
                      .+|.++++|.|..|++.|.....|..|++.|.+.++|.|.
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            5 SSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             cCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            4566666666666666666666666666666666666664

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.3e-10  Score=58.10  Aligned_cols=41  Identities=22%  Similarity=0.379  Sum_probs=25.3

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCccc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNC   87 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C   87 (144)
                      |++.|.+.++|.|.+|++.|.....|..|++.|.++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS   43 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCC
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            34455556666666666666666666666666666666655

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.97  E-value=8.3e-11  Score=61.57  Aligned_cols=50  Identities=26%  Similarity=0.349  Sum_probs=36.3

Q ss_pred             cccCChHHHHHHHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCc
Q psy6676          36 KGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPY   85 (144)
Q Consensus        36 ~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~   85 (144)
                      +.|.....|..|++.|.+.++|.|..|++.|.....|..|++.|+++++|
T Consensus         4 k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             cccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCC
Confidence            34555566666777777777777777777777777777777777777765

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=6.8e-10  Score=55.30  Aligned_cols=39  Identities=36%  Similarity=0.591  Sum_probs=28.7

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC   59 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C   59 (144)
                      .+|.++++|.|+.|++.|.....|..|++.|.+.++|.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A            5 SSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             SCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             cCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            466777777777777777777777777777777777766

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=1.7e-10  Score=57.59  Aligned_cols=39  Identities=31%  Similarity=0.530  Sum_probs=22.9

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC   59 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C   59 (144)
                      .+|.+++||.|+.|++.|.....|..|++.|.+.++|.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2yu5_A            5 SSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSS   43 (44)
T ss_dssp             CCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCC
T ss_pred             cccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCC
Confidence            345555666666666666666666666655555555554

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=5.3e-10  Score=56.28  Aligned_cols=43  Identities=30%  Similarity=0.495  Sum_probs=39.6

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAA   89 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~   89 (144)
                      |++.|.+.++|.|..|++.|.....|..|++.|.++++|.|..
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            5567888999999999999999999999999999999999974

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.5e-10  Score=57.80  Aligned_cols=41  Identities=32%  Similarity=0.447  Sum_probs=25.9

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCccc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNC   87 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C   87 (144)
                      |++.|.+.++|.|..|++.|.....|..|++.|.++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A            3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             CSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             CccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            34455566666666666666666666666666666666665

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.1e-10  Score=58.89  Aligned_cols=42  Identities=26%  Similarity=0.391  Sum_probs=27.9

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccC
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCA   88 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~   88 (144)
                      |++.|.+.++|.|.+|++.|.....|..|++.|+++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             SCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             ccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            344566666677777777777777777777666666666665

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=5.8e-10  Score=56.20  Aligned_cols=40  Identities=30%  Similarity=0.577  Sum_probs=26.0

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCP   60 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~   60 (144)
                      .+|.++++|.|.+|++.|.....|..|++.|.+.++|.|.
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            5 SSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4566666666666666666666666666666666666664

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=6.5e-10  Score=55.37  Aligned_cols=42  Identities=24%  Similarity=0.300  Sum_probs=38.8

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccC
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCA   88 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~   88 (144)
                      |++.|.+.++|.|.+|++.|.....|..|++.|+++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             SCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            556788899999999999999999999999999999999984

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.2e-10  Score=57.78  Aligned_cols=41  Identities=27%  Similarity=0.499  Sum_probs=30.4

Q ss_pred             HHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccC
Q psy6676          48 KILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCA   88 (144)
Q Consensus        48 ~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~   88 (144)
                      ++.|.+.++|.|.+|++.|.....|..|++.|.++++|.|.
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            4 GSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            34566677777777777777777777777777777777775

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=1.5e-10  Score=57.28  Aligned_cols=39  Identities=31%  Similarity=0.538  Sum_probs=21.3

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC   59 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C   59 (144)
                      .+|.++++|.|+.|++.|.....|..|++.|.+.++|.|
T Consensus         4 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            4 GSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             cccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            345555555555555555555555555555555555444

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.3e-10  Score=57.46  Aligned_cols=38  Identities=37%  Similarity=0.744  Sum_probs=18.2

Q ss_pred             ccCCCCcccccccccccCChHHHHHHHHHhCCCCCccc
Q psy6676          22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC   59 (144)
Q Consensus        22 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C   59 (144)
                      +|.++++|.|+.|++.|.....|..|++.|.+.++|.|
T Consensus         5 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            5 SSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             ccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            34444455555555555444444444444444444433

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=6.4e-10  Score=56.47  Aligned_cols=43  Identities=35%  Similarity=0.538  Sum_probs=30.3

Q ss_pred             ccccCCCCccccc--ccccccCChHHHHHHHHHhCCCCCcccccc
Q psy6676          20 GYIHSKEKPFKCT--ECGKGFCQSRTLAVHKILHLEESPHKCPVC   62 (144)
Q Consensus        20 ~~~h~~~~~~~C~--~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C   62 (144)
                      .++|.++++|.|.  .|++.|.....|..|++.|.+.++|.|..|
T Consensus         4 ~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            4 GSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3566777777776  677777777777777777777777777655

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=7.8e-10  Score=55.72  Aligned_cols=40  Identities=33%  Similarity=0.620  Sum_probs=30.8

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCP   60 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~   60 (144)
                      .+|.++++|.|..|++.|.....|..|++.|.+.++|.|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            5 SSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             cccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            4677777888888888888877788887777777777775

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=5.6e-10  Score=55.10  Aligned_cols=41  Identities=29%  Similarity=0.450  Sum_probs=37.8

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCccc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNC   87 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C   87 (144)
                      |++.|.+.++|.|..|++.|.....|..|++.|+++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            45668889999999999999999999999999999999987

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=1.8e-10  Score=58.16  Aligned_cols=40  Identities=33%  Similarity=0.491  Sum_probs=22.4

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCC-CCCcccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLE-ESPHKCP   60 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~-~~~~~C~   60 (144)
                      ++|.++++|.|..|++.|.....|..|++.|.+ .++|.|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            5 SSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             cccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            345555555555555555555555555555555 5555553

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=5.7e-10  Score=56.24  Aligned_cols=40  Identities=45%  Similarity=0.687  Sum_probs=32.1

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCP   60 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~   60 (144)
                      .+|.++++|.|..|++.|.....|..|++.|.+.++|.|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            5 SSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             SCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             cCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            5677888888888888888888888888888877777775

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=7.9e-10  Score=55.11  Aligned_cols=42  Identities=31%  Similarity=0.428  Sum_probs=38.8

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccC
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCA   88 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~   88 (144)
                      |++.|.+.++|.|..|++.|.....|..|++.|+++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            566788999999999999999999999999999999999884

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=1.8e-10  Score=57.54  Aligned_cols=39  Identities=21%  Similarity=0.380  Sum_probs=22.7

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC   59 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C   59 (144)
                      .+|.++++|.|+.|++.|.....|..|++.|.+.++|.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2emb_A            5 SSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSS   43 (44)
T ss_dssp             SCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTC
T ss_pred             cccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCC
Confidence            345555566666666666666566666555555555554

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=1.1e-09  Score=54.66  Aligned_cols=39  Identities=33%  Similarity=0.456  Sum_probs=29.7

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC   59 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C   59 (144)
                      .+|.++++|.|..|++.|.....|..|++.|.+.++|.|
T Consensus         5 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            5 SSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             CSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            456777777788888777777777777777777777776

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=5e-10  Score=55.25  Aligned_cols=39  Identities=33%  Similarity=0.643  Sum_probs=29.6

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC   59 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C   59 (144)
                      .+|.+++||.|..|++.|.....|..|++.|.+.++|.|
T Consensus         4 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            4 GSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             cccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            567777778888888888777777777777777777665

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.94  E-value=1.9e-10  Score=56.83  Aligned_cols=38  Identities=29%  Similarity=0.461  Sum_probs=21.1

Q ss_pred             HhCCCCCcccccccccccCchHHHHHHhhcCCCCCccc
Q psy6676          50 LHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNC   87 (144)
Q Consensus        50 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C   87 (144)
                      .|.+.++|.|..|++.|.....|..|++.|+++++|.|
T Consensus         5 ~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            5 SSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             cCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            34455555555555555555555555555555555544

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=2.1e-10  Score=57.80  Aligned_cols=40  Identities=30%  Similarity=0.676  Sum_probs=24.9

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCP   60 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~   60 (144)
                      .+|.+.++|.|+.|++.|.....|..|++.|.+.++|.|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            5 SSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             cCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4556666666666666666666666666666666666654

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.6e-10  Score=58.38  Aligned_cols=42  Identities=26%  Similarity=0.437  Sum_probs=28.5

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccC
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCA   88 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~   88 (144)
                      |++.|.+.++|.|.+|++.|.....|..|++.|+++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             cccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            344566666777777777777777777777777777777664

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=4.7e-10  Score=55.31  Aligned_cols=41  Identities=27%  Similarity=0.473  Sum_probs=38.0

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCccc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNC   87 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C   87 (144)
                      |++.|.+.++|.|..|++.|.....|..|++.|+++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            45678889999999999999999999999999999999987

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=8.4e-10  Score=55.02  Aligned_cols=42  Identities=21%  Similarity=0.286  Sum_probs=38.8

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccC
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCA   88 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~   88 (144)
                      |++.|.+.++|.|..|++.|.....|..|++.|.++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            3 SGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             cccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            556788899999999999999999999999999999999984

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=8.3e-10  Score=55.55  Aligned_cols=43  Identities=33%  Similarity=0.502  Sum_probs=39.5

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAA   89 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~   89 (144)
                      |++.|.+.++|.|..|++.|.....|..|++.|.++++|.|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             cccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5567888999999999999999999999999999999999963

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=2.7e-10  Score=56.92  Aligned_cols=40  Identities=18%  Similarity=0.252  Sum_probs=26.7

Q ss_pred             HHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCccc
Q psy6676          48 KILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNC   87 (144)
Q Consensus        48 ~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C   87 (144)
                      ++.|.+.++|.|.+|++.|.....|..|++.|+++++|.|
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            4 GSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             SCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            3445566667777777777777777777776766666666

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=8.5e-10  Score=55.58  Aligned_cols=43  Identities=23%  Similarity=0.325  Sum_probs=39.3

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCC-CCCcccCc
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTD-IKPYNCAA   89 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~-~~~~~C~~   89 (144)
                      |++.|.+.++|.|..|++.|.....|..|++.|++ +++|.|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45678889999999999999999999999999999 99999963

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=1.4e-10  Score=58.54  Aligned_cols=42  Identities=31%  Similarity=0.468  Sum_probs=26.9

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccC
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCA   88 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~   88 (144)
                      |++.|.+.++|.|.+|++.|.....|..|++.|+++++|.|.
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            344556666666666666666666666666666666666664

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=1.2e-10  Score=57.54  Aligned_cols=37  Identities=35%  Similarity=0.591  Sum_probs=17.5

Q ss_pred             hCCCCCcccccccccccCchHHHHHHhhcCCCCCccc
Q psy6676          51 HLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNC   87 (144)
Q Consensus        51 ~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C   87 (144)
                      |.+.++|.|..|++.|.....|..|++.|.++++|.|
T Consensus         6 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            6 SGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             cCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            4444444444444444444444444444444444443

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=1.5e-09  Score=54.12  Aligned_cols=40  Identities=40%  Similarity=0.620  Sum_probs=29.3

Q ss_pred             ccccCCCCcccccccccccCChHHHHHHHHHhCCCCCccc
Q psy6676          20 GYIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC   59 (144)
Q Consensus        20 ~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C   59 (144)
                      ..+|.++++|.|.+|++.|.....|..|++.|.+.++|.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            4 GSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            3567777777777777777777777777777777776665

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=2.1e-10  Score=57.27  Aligned_cols=39  Identities=28%  Similarity=0.543  Sum_probs=22.8

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC   59 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C   59 (144)
                      .+|.++++|.|.+|++.|.....|..|++.|.+.++|.|
T Consensus         5 ~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            5 SSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             cCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            345555666666666666666666666655555555554

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=4.2e-10  Score=57.17  Aligned_cols=42  Identities=24%  Similarity=0.449  Sum_probs=36.8

Q ss_pred             HHhCCCCCcccc--cccccccCchHHHHHHhhcCCCCCcccCcc
Q psy6676          49 ILHLEESPHKCP--VCSRSFNQRSNLKTHLLTHTDIKPYNCAAC   90 (144)
Q Consensus        49 ~~~~~~~~~~C~--~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C   90 (144)
                      +.|.+.++|.|.  .|++.|.....|..|++.|+++++|.|..|
T Consensus         5 ~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            5 SSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            457788899998  799999999999999999999999999877

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.89  E-value=3.3e-11  Score=67.59  Aligned_cols=62  Identities=19%  Similarity=0.256  Sum_probs=36.0

Q ss_pred             HHHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcchhhhcChHHHHHhHhhccCC
Q psy6676          46 VHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTHNLG  110 (144)
Q Consensus        46 ~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  110 (144)
                      .|+..+-+.+++.|..|+..|. ...|..|+ .+.+++++.|..|++.|.. ..|..|+++|...
T Consensus         7 ~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~~-~~l~~H~~~c~~~   68 (75)
T 2d9k_A            7 GHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVLV-KDLKTHPEVCGRE   68 (75)
T ss_dssp             CCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEET-TGGGTHHHHBTTB
T ss_pred             hhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCcH-HHHHHHHHHccCC
Confidence            3444445555566666665553 55566666 5566666666666666553 5666666665544

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=8.8e-10  Score=54.94  Aligned_cols=42  Identities=17%  Similarity=0.256  Sum_probs=38.6

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccC
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCA   88 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~   88 (144)
                      |++.|.+.++|.|.+|++.|.....|..|++.|+++++|.|.
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            556788899999999999999999999999999999999883

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=1.7e-10  Score=58.24  Aligned_cols=40  Identities=35%  Similarity=0.529  Sum_probs=25.5

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccc
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCP   60 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~   60 (144)
                      .+|.++++|.|..|++.|.....|..|++.|.+.++|.|.
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            5 SSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             cccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4556666666666666666666666666666666666653

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.89  E-value=2.4e-10  Score=61.55  Aligned_cols=54  Identities=19%  Similarity=0.375  Sum_probs=46.3

Q ss_pred             HHHHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcchhhhcChHHHH
Q psy6676          45 AVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCDLR  101 (144)
Q Consensus        45 ~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~  101 (144)
                      ..|++.|.+.++|.|..|++.|.....|.   +.|.++++|.|..|++.|.....+.
T Consensus         3 ~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~   56 (62)
T 1vd4_A            3 ETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAM   56 (62)
T ss_dssp             CCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTCS
T ss_pred             hhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCcccc
Confidence            34667789999999999999998887775   7899999999999999998876644

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.88  E-value=1e-09  Score=54.48  Aligned_cols=40  Identities=20%  Similarity=0.278  Sum_probs=31.9

Q ss_pred             HhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCc
Q psy6676          50 LHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAA   89 (144)
Q Consensus        50 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~   89 (144)
                      .|.+.++|.|..|++.|.....|..|++.|+++++|.|.+
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            4 GSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             CcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            4667778888888888888888888888888888888753

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=9.7e-10  Score=55.33  Aligned_cols=42  Identities=24%  Similarity=0.396  Sum_probs=39.1

Q ss_pred             HHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccC
Q psy6676          47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCA   88 (144)
Q Consensus        47 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~   88 (144)
                      |++.|.+.++|.|.+|++.|.....|..|++.|+++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             cccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            566788999999999999999999999999999999999996

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=4.7e-10  Score=56.02  Aligned_cols=37  Identities=35%  Similarity=0.457  Sum_probs=21.8

Q ss_pred             HHhhcCCCCCcccCcchhhhcChHHHHHhHhhccCCC
Q psy6676          75 HLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTHNLGS  111 (144)
Q Consensus        75 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  111 (144)
                      |++.|+++++|.|..|++.|.....|..|+++|..+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k   39 (44)
T 2epv_A            3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVS   39 (44)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCS
T ss_pred             CCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCC
Confidence            4455556666666666666666666666666655443

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.87  E-value=9e-10  Score=52.72  Aligned_cols=35  Identities=34%  Similarity=0.620  Sum_probs=30.7

Q ss_pred             HHhhcCCCCCcccCcchhhhcChHHHHHhHhhccC
Q psy6676          75 HLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTHNL  109 (144)
Q Consensus        75 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  109 (144)
                      |++.|.++++|.|..|++.|.....|..|+++|..
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            66788889999999999999999999999988864

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.86  E-value=1.3e-09  Score=54.90  Aligned_cols=39  Identities=33%  Similarity=0.439  Sum_probs=28.4

Q ss_pred             HhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccC
Q psy6676          50 LHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCA   88 (144)
Q Consensus        50 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~   88 (144)
                      .|.+.++|.|..|++.|.....|..|++.|+++++|.|.
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            6 SGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            456667777777777777777777777777777777775

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.85  E-value=1.4e-09  Score=53.34  Aligned_cols=37  Identities=27%  Similarity=0.445  Sum_probs=24.8

Q ss_pred             hCCCCCcccccccccccCchHHHHHHhhcCCCCCccc
Q psy6676          51 HLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNC   87 (144)
Q Consensus        51 ~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C   87 (144)
                      |.+.++|.|..|++.|.....|..|++.|+++++|.|
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            5 SSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             CCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             cCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            5556666666676666666666666666666666655

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=1.2e-09  Score=54.75  Aligned_cols=39  Identities=31%  Similarity=0.492  Sum_probs=29.4

Q ss_pred             HhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccC
Q psy6676          50 LHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCA   88 (144)
Q Consensus        50 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~   88 (144)
                      .|.+.++|.|.+|++.|.....|..|++.|.++++|.|.
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            6 SGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            456677777777777777777777777777777777775

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.79  E-value=5.3e-09  Score=50.65  Aligned_cols=37  Identities=16%  Similarity=0.369  Sum_probs=24.6

Q ss_pred             cCCCCcccccccccccCChHHHHHHHHHhCCCCCccc
Q psy6676          23 HSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKC   59 (144)
Q Consensus        23 h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C   59 (144)
                      |.++++|.|..|++.|.....|..|++.|.+.++|.+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            3456677777777777777777777777766666554

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.78  E-value=1.3e-09  Score=62.82  Aligned_cols=58  Identities=17%  Similarity=0.268  Sum_probs=45.5

Q ss_pred             ccccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccccccccCchHHHHHHhhcCC
Q psy6676          20 GYIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTD   81 (144)
Q Consensus        20 ~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~   81 (144)
                      ..+|.++++|.|++|++.|.....|..|++.|.+.++|.|..|.+    ...+..|++.|.+
T Consensus        17 ~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~~----~~~~~~~~~~~~~   74 (88)
T 1x6f_A           17 NGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQER----RKQLLSKQKYADG   74 (88)
T ss_dssp             CCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCSC----CCCCCCCCCCCCC
T ss_pred             ccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhhh----HHHHHhhhccccc
Confidence            567889999999999999999999999999998888888876553    3344456666654

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=3.2e-09  Score=50.71  Aligned_cols=34  Identities=21%  Similarity=0.437  Sum_probs=28.2

Q ss_pred             hhcCCCCCcccCcchhhhcChHHHHHhHhhccCC
Q psy6676          77 LTHTDIKPYNCAACGKVFRRNCDLRRHSLTHNLG  110 (144)
Q Consensus        77 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  110 (144)
                      +.|.++++|.|..|++.|.....|..|+++|+.+
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~   35 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPE   35 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSS
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCC
Confidence            4577888888888888888888888888888754

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.71  E-value=1.5e-08  Score=48.25  Aligned_cols=35  Identities=23%  Similarity=0.427  Sum_probs=28.3

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCCC
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEES   55 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~   55 (144)
                      .+|.++++|.|..|++.|.....|..|++.|.+.+
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   36 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEV   36 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCC
Confidence            35778888888888888888888888888887654

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.70  E-value=1.7e-08  Score=47.41  Aligned_cols=34  Identities=24%  Similarity=0.211  Sum_probs=26.1

Q ss_pred             ccCCCCcccccccccccCChHHHHHHHHHhCCCC
Q psy6676          22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEES   55 (144)
Q Consensus        22 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~   55 (144)
                      +|.++++|.|..|++.|.....|..|++.|.+.+
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~k   34 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHIREVHGAA   34 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHTSCTT
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHHHHHcCCC
Confidence            3567788888888888888888888887777654

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.70  E-value=9.3e-09  Score=49.74  Aligned_cols=32  Identities=16%  Similarity=0.193  Sum_probs=27.2

Q ss_pred             cCCCCCcccCc--chhhhcChHHHHHhHhhccCC
Q psy6676          79 HTDIKPYNCAA--CGKVFRRNCDLRRHSLTHNLG  110 (144)
Q Consensus        79 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  110 (144)
                      +++++||.|..  |++.|.....|..|+++|+..
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            56788999976  999999999999999988754

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.69  E-value=1.8e-08  Score=47.35  Aligned_cols=34  Identities=26%  Similarity=0.429  Sum_probs=25.6

Q ss_pred             ccCCCCcccccccccccCChHHHHHHHHHhCCCC
Q psy6676          22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEES   55 (144)
Q Consensus        22 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~   55 (144)
                      +|.++++|.|..|++.|.....|..|++.|.+.+
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~   34 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCC
Confidence            3667778888888888888888888877776654

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.68  E-value=1.1e-08  Score=48.07  Aligned_cols=32  Identities=22%  Similarity=0.478  Sum_probs=25.6

Q ss_pred             cCCCCCcccCcchhhhcChHHHHHhHhhccCC
Q psy6676          79 HTDIKPYNCAACGKVFRRNCDLRRHSLTHNLG  110 (144)
Q Consensus        79 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  110 (144)
                      |.++++|.|..|++.|.....|..|+++|+.+
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   33 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCC
Confidence            56778888888888888888888888887654

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.68  E-value=1.2e-08  Score=47.99  Aligned_cols=32  Identities=28%  Similarity=0.366  Sum_probs=25.8

Q ss_pred             cCCCCCcccCcchhhhcChHHHHHhHhhccCC
Q psy6676          79 HTDIKPYNCAACGKVFRRNCDLRRHSLTHNLG  110 (144)
Q Consensus        79 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  110 (144)
                      |.++++|.|..|++.|.....|..|+++|+.+
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~   33 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGA   33 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCT
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCC
Confidence            56778888888888888888888888887654

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.66  E-value=1.7e-08  Score=48.78  Aligned_cols=34  Identities=21%  Similarity=0.392  Sum_probs=18.7

Q ss_pred             CCCCcccccccccccCchHHHHHHhhcCCCCCcc
Q psy6676          53 EESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYN   86 (144)
Q Consensus        53 ~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~   86 (144)
                      +.++|.|.+|++.|.....|..|++.|+++++|.
T Consensus         3 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   36 (39)
T 1njq_A            3 PPRSYTCSFCKREFRSAQALGGHMNVHRRDRARL   36 (39)
T ss_dssp             CSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTT
T ss_pred             CCCceECCCCCcccCCHHHHHHHHHHcCCCccce
Confidence            3445555555555555555555555555555554

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.65  E-value=7.5e-09  Score=49.53  Aligned_cols=33  Identities=21%  Similarity=0.284  Sum_probs=28.0

Q ss_pred             hhcCCCCCcccCcchhhhcChHHHHHh-HhhccC
Q psy6676          77 LTHTDIKPYNCAACGKVFRRNCDLRRH-SLTHNL  109 (144)
Q Consensus        77 ~~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~  109 (144)
                      +.|+++++|.|..|++.|.....|..| +++|..
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccC
Confidence            457888999999999999999999999 777764

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.65  E-value=3.2e-08  Score=53.87  Aligned_cols=41  Identities=22%  Similarity=0.425  Sum_probs=29.2

Q ss_pred             cccCCCCcccccc--cccccCChHHHHHHH-HHhCCCCCccccc
Q psy6676          21 YIHSKEKPFKCTE--CGKGFCQSRTLAVHK-ILHLEESPHKCPV   61 (144)
Q Consensus        21 ~~h~~~~~~~C~~--C~~~f~~~~~l~~h~-~~~~~~~~~~C~~   61 (144)
                      ...++++||.|..  |++.|.....|..|+ +.|++.+|+.|..
T Consensus        20 ~~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           20 TRYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SSSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             ccccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            4566777777754  777777777777776 5677777777653

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.61  E-value=1.5e-08  Score=51.54  Aligned_cols=36  Identities=28%  Similarity=0.511  Sum_probs=28.0

Q ss_pred             hcCCCCCcccCcchhhhcChHHHHHhHh-hccCCCCC
Q psy6676          78 THTDIKPYNCAACGKVFRRNCDLRRHSL-THNLGSAT  113 (144)
Q Consensus        78 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~  113 (144)
                      +|+++++|.|..|++.|.....|..|++ +|..+...
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~~   37 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEEG   37 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC----
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCCC
Confidence            3678899999999999999999999999 78765544

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.59  E-value=1.6e-08  Score=56.44  Aligned_cols=61  Identities=18%  Similarity=0.185  Sum_probs=53.5

Q ss_pred             ccccCCCCcccccccccccCChHHHHHHHHHhCCCCCcccccccccccCchHHHHHHhhcCCCC
Q psy6676          20 GYIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIK   83 (144)
Q Consensus        20 ~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~   83 (144)
                      ..++.+.+++.|..|+..| ....|..|. .+-+.+++.|..|++.|. ...|..|++.+.++.
T Consensus         9 ~~~~c~~r~~~C~~C~~~~-~~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~~   69 (75)
T 2d9k_A            9 EETECPLRLAVCQHCDLEL-SILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGREG   69 (75)
T ss_dssp             CCCCCCCCCEECSSSCCEE-CHHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTBS
T ss_pred             CcccCCCcccCCcccChHh-hHHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccCCc
Confidence            3568899999999999999 488999999 888899999999999877 488999999888754

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.58  E-value=2.5e-08  Score=47.22  Aligned_cols=32  Identities=28%  Similarity=0.543  Sum_probs=26.4

Q ss_pred             hcCCCCCcccCcchhhhcChHHHHHhHhhccC
Q psy6676          78 THTDIKPYNCAACGKVFRRNCDLRRHSLTHNL  109 (144)
Q Consensus        78 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  109 (144)
                      .|.++++|.|..|++.|.....|..|+++|..
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGD   34 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTST
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcC
Confidence            46778888888888888888888888888764

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.58  E-value=3.2e-08  Score=46.79  Aligned_cols=32  Identities=25%  Similarity=0.552  Sum_probs=26.5

Q ss_pred             hcCCCCCcccCcchhhhcChHHHHHhHhhccC
Q psy6676          78 THTDIKPYNCAACGKVFRRNCDLRRHSLTHNL  109 (144)
Q Consensus        78 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  109 (144)
                      .|.++++|.|..|++.|.....|..|+++|..
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHST   34 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSST
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhcc
Confidence            46778888888888888888888888888764

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.56  E-value=3.5e-08  Score=46.59  Aligned_cols=33  Identities=24%  Similarity=0.421  Sum_probs=26.6

Q ss_pred             hcCCCCCcccCcchhhhcChHHHHHhHhhccCC
Q psy6676          78 THTDIKPYNCAACGKVFRRNCDLRRHSLTHNLG  110 (144)
Q Consensus        78 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  110 (144)
                      .|.++++|.|..|++.|.....|..|+++|..+
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            367778888888888888888888888887643

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.56  E-value=5.1e-08  Score=46.01  Aligned_cols=33  Identities=30%  Similarity=0.554  Sum_probs=26.7

Q ss_pred             hcCCCCCcccCcchhhhcChHHHHHhHhhccCC
Q psy6676          78 THTDIKPYNCAACGKVFRRNCDLRRHSLTHNLG  110 (144)
Q Consensus        78 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  110 (144)
                      .|.++++|.|..|++.|.....|..|+++|..+
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            356778888888888888888888888887643

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.56  E-value=7.8e-08  Score=44.67  Aligned_cols=31  Identities=35%  Similarity=0.528  Sum_probs=18.8

Q ss_pred             CcccccccccccCChHHHHHHHHHhCCCCCc
Q psy6676          27 KPFKCTECGKGFCQSRTLAVHKILHLEESPH   57 (144)
Q Consensus        27 ~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~   57 (144)
                      +||.|+.|++.|.....|..|++.|.+.++|
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   31 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEE   31 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            3566666666666666666666666655554

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.55  E-value=7.3e-08  Score=52.50  Aligned_cols=36  Identities=25%  Similarity=0.363  Sum_probs=18.3

Q ss_pred             CCCCCccccc--ccccccCchHHHHHH-hhcCCCCCccc
Q psy6676          52 LEESPHKCPV--CSRSFNQRSNLKTHL-LTHTDIKPYNC   87 (144)
Q Consensus        52 ~~~~~~~C~~--C~~~~~~~~~l~~h~-~~h~~~~~~~C   87 (144)
                      .+.+||.|..  |++.|.....|..|+ +.|++++||.|
T Consensus        23 sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~   61 (73)
T 1x3c_A           23 SPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFS   61 (73)
T ss_dssp             CSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCC
T ss_pred             cCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccc
Confidence            3445555543  555555555555554 34555555544

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.55  E-value=9.5e-08  Score=45.35  Aligned_cols=33  Identities=33%  Similarity=0.690  Sum_probs=24.7

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCC
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLE   53 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~   53 (144)
                      ++|.+++||.|+.|++.|.....|..|++.|.+
T Consensus         4 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            4 RGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             STTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CcCCCCCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            466777778888888888777777777777654

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.54  E-value=2.8e-08  Score=47.31  Aligned_cols=32  Identities=28%  Similarity=0.536  Sum_probs=26.6

Q ss_pred             hcCCCCCcccCcchhhhcCh-HHHHHhHhhccC
Q psy6676          78 THTDIKPYNCAACGKVFRRN-CDLRRHSLTHNL  109 (144)
Q Consensus        78 ~h~~~~~~~C~~C~~~f~~~-~~l~~H~~~h~~  109 (144)
                      .|.++++|.|..|++.|... ..|..|+++|..
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~   35 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEG   35 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHHHHT
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHhcCC
Confidence            56778888888888888888 888888888764

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.54  E-value=9.2e-08  Score=45.08  Aligned_cols=33  Identities=33%  Similarity=0.514  Sum_probs=26.4

Q ss_pred             ccCCCCcccccccccccCChHHHHHHHHHhCCC
Q psy6676          22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEE   54 (144)
Q Consensus        22 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~   54 (144)
                      .|.++++|.|..|++.|.....|..|++.|.+.
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            567788888888888888888888888877654

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.54  E-value=6.1e-08  Score=46.09  Aligned_cols=34  Identities=24%  Similarity=0.285  Sum_probs=27.3

Q ss_pred             cccCCCCcccccccccccCCh-HHHHHHHHHhCCC
Q psy6676          21 YIHSKEKPFKCTECGKGFCQS-RTLAVHKILHLEE   54 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~-~~l~~h~~~~~~~   54 (144)
                      .+|.++++|.|+.|++.|... ..|..|++.|.+.
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            467788888888888888888 8888888877654

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.53  E-value=9.8e-08  Score=45.05  Aligned_cols=34  Identities=32%  Similarity=0.428  Sum_probs=26.3

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCC
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEE   54 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~   54 (144)
                      ..|.+++||.|..|++.|.....|..|++.|.+.
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            2 SSGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             CSSCCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            3567788888888888888888888888777654

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.52  E-value=1.5e-07  Score=51.06  Aligned_cols=37  Identities=30%  Similarity=0.495  Sum_probs=30.5

Q ss_pred             cCCCCCcccCcchhhhcChHHHHHhHhhccCCCCCCC
Q psy6676          79 HTDIKPYNCAACGKVFRRNCDLRRHSLTHNLGSATST  115 (144)
Q Consensus        79 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~  115 (144)
                      +..+++|.|..|++.|.....|..|+++|+.......
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~~~~~   44 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEAQHGVTSLQLG   44 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTSCCCC
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhhhhCCCccccc
Confidence            5678899999999999999999999999887654433

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.51  E-value=1.5e-07  Score=44.29  Aligned_cols=33  Identities=39%  Similarity=0.618  Sum_probs=26.6

Q ss_pred             ccCCCCcccccccccccCChHHHHHHHHHhCCC
Q psy6676          22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEE   54 (144)
Q Consensus        22 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~   54 (144)
                      +|.++++|.|..|++.|.....|..|++.|.+.
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            567788888888888888888888888887654

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.50  E-value=6.7e-08  Score=45.64  Aligned_cols=32  Identities=28%  Similarity=0.473  Sum_probs=25.7

Q ss_pred             cCCCCCcccCcchhhhcChHHHHHhHhhccCC
Q psy6676          79 HTDIKPYNCAACGKVFRRNCDLRRHSLTHNLG  110 (144)
Q Consensus        79 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  110 (144)
                      |.++++|.|..|++.|.....|..|+++|..+
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            56678888888888888888888888887643

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.50  E-value=8.7e-08  Score=44.50  Aligned_cols=30  Identities=23%  Similarity=0.546  Sum_probs=15.1

Q ss_pred             CcccccccccccCchHHHHHHhhcCCCCCc
Q psy6676          56 PHKCPVCSRSFNQRSNLKTHLLTHTDIKPY   85 (144)
Q Consensus        56 ~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~   85 (144)
                      +|.|..|++.|.....|..|++.|+++++|
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   31 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHITLHELLGEE   31 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTTTCCC
T ss_pred             cccCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            344555555555555555555555554444

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.48  E-value=1.1e-07  Score=44.90  Aligned_cols=33  Identities=18%  Similarity=0.339  Sum_probs=24.6

Q ss_pred             ccCCCCcccccccccccCChHHHHHHHHHhCCC
Q psy6676          22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEE   54 (144)
Q Consensus        22 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~   54 (144)
                      .|.+++||.|.+|++.|.....|..|++.|.+.
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            466777888888888888887788887777653

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.46  E-value=1.2e-07  Score=45.14  Aligned_cols=33  Identities=18%  Similarity=0.235  Sum_probs=26.6

Q ss_pred             cccCCCCcccccccccccCChHHHHHH-HHHhCC
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVH-KILHLE   53 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h-~~~~~~   53 (144)
                      ++|.+++||.|..|++.|.....|..| ++.|.+
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccC
Confidence            357788888888888888888888888 777764

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.45  E-value=1.5e-07  Score=44.95  Aligned_cols=35  Identities=43%  Similarity=0.680  Sum_probs=25.3

Q ss_pred             cCCCCccccc--ccccccCChHHHHHHHHHhCCCCCc
Q psy6676          23 HSKEKPFKCT--ECGKGFCQSRTLAVHKILHLEESPH   57 (144)
Q Consensus        23 h~~~~~~~C~--~C~~~f~~~~~l~~h~~~~~~~~~~   57 (144)
                      |.++++|.|.  .|++.|.....|..|++.|.+.++|
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            4567777777  4887777777777777777766654

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.45  E-value=2.2e-07  Score=44.82  Aligned_cols=32  Identities=22%  Similarity=0.269  Sum_probs=23.9

Q ss_pred             cCCCCcccccc--cccccCChHHHHHHHHHhCCC
Q psy6676          23 HSKEKPFKCTE--CGKGFCQSRTLAVHKILHLEE   54 (144)
Q Consensus        23 h~~~~~~~C~~--C~~~f~~~~~l~~h~~~~~~~   54 (144)
                      +.+++||.|++  |++.|.....|..|++.|++.
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            45677888875  888888888888887777653

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.44  E-value=9.3e-08  Score=42.06  Aligned_cols=27  Identities=30%  Similarity=0.607  Sum_probs=22.2

Q ss_pred             CCCcccCcchhhhcChHHHHHhHhhcc
Q psy6676          82 IKPYNCAACGKVFRRNCDLRRHSLTHN  108 (144)
Q Consensus        82 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  108 (144)
                      +++|.|..|++.|.....|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            367888888888888888888888763

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.43  E-value=7.4e-08  Score=42.51  Aligned_cols=27  Identities=22%  Similarity=0.493  Sum_probs=22.1

Q ss_pred             CCCcccCcchhhhcChHHHHHhHhhcc
Q psy6676          82 IKPYNCAACGKVFRRNCDLRRHSLTHN  108 (144)
Q Consensus        82 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  108 (144)
                      +++|.|..|++.|.....|..|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            367888888888888888888888763

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.43  E-value=2.4e-07  Score=43.65  Aligned_cols=33  Identities=33%  Similarity=0.483  Sum_probs=25.1

Q ss_pred             ccCCCCcccccccccccCChHHHHHHHHHhCCC
Q psy6676          22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEE   54 (144)
Q Consensus        22 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~   54 (144)
                      .|.+.++|.|+.|++.|.....|..|++.|.+.
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            356777888888888888888888888777654

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.43  E-value=1.3e-07  Score=47.94  Aligned_cols=34  Identities=32%  Similarity=0.647  Sum_probs=24.5

Q ss_pred             ccCCCCcccccccccccCChHHHHHHHH-HhCCCC
Q psy6676          22 IHSKEKPFKCTECGKGFCQSRTLAVHKI-LHLEES   55 (144)
Q Consensus        22 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~-~~~~~~   55 (144)
                      +|.++++|.|.+|++.|.....|..|++ .|.+..
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~   35 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEE   35 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC--
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCC
Confidence            4677788888888888888888888877 676543

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.39  E-value=1.3e-07  Score=41.84  Aligned_cols=27  Identities=33%  Similarity=0.862  Sum_probs=22.3

Q ss_pred             CCCcccCcchhhhcChHHHHHhHhhcc
Q psy6676          82 IKPYNCAACGKVFRRNCDLRRHSLTHN  108 (144)
Q Consensus        82 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  108 (144)
                      +++|.|..|++.|.....|..|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcC
Confidence            367888888888888888888888775

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.35  E-value=2.2e-07  Score=44.35  Aligned_cols=32  Identities=31%  Similarity=0.664  Sum_probs=22.2

Q ss_pred             cCCCCCcccC--cchhhhcChHHHHHhHhhccCC
Q psy6676          79 HTDIKPYNCA--ACGKVFRRNCDLRRHSLTHNLG  110 (144)
Q Consensus        79 h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~  110 (144)
                      |+++++|.|.  .|++.|.....|..|+++|...
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   34 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMT   34 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCC
Confidence            3556777777  4777777777777777776644

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.34  E-value=2.5e-07  Score=41.41  Aligned_cols=28  Identities=39%  Similarity=0.805  Sum_probs=21.6

Q ss_pred             CCCcccCcchhhhcChHHHHHhHhhccC
Q psy6676          82 IKPYNCAACGKVFRRNCDLRRHSLTHNL  109 (144)
Q Consensus        82 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  109 (144)
                      +++|.|..|++.|.....|..|+++|..
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~   28 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDT   28 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhcc
Confidence            3577888888888888888888877764

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.34  E-value=2.3e-07  Score=44.17  Aligned_cols=25  Identities=36%  Similarity=0.703  Sum_probs=17.9

Q ss_pred             CCCCcccccccccccCChHHHHHHH
Q psy6676          24 SKEKPFKCTECGKGFCQSRTLAVHK   48 (144)
Q Consensus        24 ~~~~~~~C~~C~~~f~~~~~l~~h~   48 (144)
                      .+++||.|+.|++.|.....|..|+
T Consensus         4 ~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            4 LKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCccCeECCCCCCccCCHhHccCcC
Confidence            4667777777777777777777775

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.34  E-value=2.3e-07  Score=44.12  Aligned_cols=32  Identities=31%  Similarity=0.475  Sum_probs=26.0

Q ss_pred             cCCCCCcccC--cchhhhcChHHHHHhHhhccCC
Q psy6676          79 HTDIKPYNCA--ACGKVFRRNCDLRRHSLTHNLG  110 (144)
Q Consensus        79 h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~  110 (144)
                      |+++++|.|.  .|++.|.....|..|+++|..+
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            5678888887  4999999988999998887643

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.33  E-value=1.7e-08  Score=58.12  Aligned_cols=57  Identities=18%  Similarity=0.209  Sum_probs=46.5

Q ss_pred             HHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcchhhhcChHHHHHhHhhccC
Q psy6676          49 ILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTHNL  109 (144)
Q Consensus        49 ~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  109 (144)
                      ..|.+.++|.|.+|++.|.....|..|++.|+++++|.|..|.    ....|..|+++|..
T Consensus        18 ~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~----~~~~~~~~~~~~~~   74 (88)
T 1x6f_A           18 GPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQE----RRKQLLSKQKYADG   74 (88)
T ss_dssp             CSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCS----CCCCCCCCCCCCCC
T ss_pred             cccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhh----hHHHHHhhhccccc
Confidence            4578889999999999999999999999999999999998765    44555666666554

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.32  E-value=2.4e-07  Score=44.11  Aligned_cols=25  Identities=24%  Similarity=0.543  Sum_probs=18.1

Q ss_pred             CCCCCcccCcchhhhcChHHHHHhH
Q psy6676          80 TDIKPYNCAACGKVFRRNCDLRRHS  104 (144)
Q Consensus        80 ~~~~~~~C~~C~~~f~~~~~l~~H~  104 (144)
                      .+++||.|..|+++|...+.|.+|+
T Consensus         4 ~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            4 LKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCccCeECCCCCCccCCHhHccCcC
Confidence            4567777777777777777777776

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.31  E-value=4.3e-08  Score=49.46  Aligned_cols=37  Identities=27%  Similarity=0.547  Sum_probs=29.7

Q ss_pred             HHHhhcCCCCCcccC--cchhhhcChHHHHHhHhhccCC
Q psy6676          74 THLLTHTDIKPYNCA--ACGKVFRRNCDLRRHSLTHNLG  110 (144)
Q Consensus        74 ~h~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~  110 (144)
                      .|...|.++++|.|.  .|++.|.....|..|+++|..+
T Consensus         8 ~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A            8 DKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             GGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             HHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            345568888999995  6999999999999999888753

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.30  E-value=4.5e-07  Score=40.26  Aligned_cols=27  Identities=30%  Similarity=0.720  Sum_probs=20.4

Q ss_pred             CCcccCcchhhhcChHHHHHhHhhccC
Q psy6676          83 KPYNCAACGKVFRRNCDLRRHSLTHNL  109 (144)
Q Consensus        83 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  109 (144)
                      ++|.|..|++.|.....|..|+++|..
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTN   27 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcC
Confidence            357788888888888888888877754

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.29  E-value=6.3e-07  Score=42.53  Aligned_cols=33  Identities=30%  Similarity=0.452  Sum_probs=25.5

Q ss_pred             ccCCCCcccccc--cccccCChHHHHHHHHHhCCC
Q psy6676          22 IHSKEKPFKCTE--CGKGFCQSRTLAVHKILHLEE   54 (144)
Q Consensus        22 ~h~~~~~~~C~~--C~~~f~~~~~l~~h~~~~~~~   54 (144)
                      .|.++++|.|.+  |++.|.....|..|++.|.+.
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            356788888874  888888888888888877654

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.28  E-value=4.6e-07  Score=40.48  Aligned_cols=28  Identities=25%  Similarity=0.424  Sum_probs=20.8

Q ss_pred             CCcccCcchhhhcChHHHHHhHhhccCC
Q psy6676          83 KPYNCAACGKVFRRNCDLRRHSLTHNLG  110 (144)
Q Consensus        83 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  110 (144)
                      ++|.|..|++.|.....|..|+++|+.+
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~   28 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccC
Confidence            3577888888888888888887777644

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.28  E-value=3.8e-07  Score=39.88  Aligned_cols=26  Identities=31%  Similarity=0.708  Sum_probs=19.4

Q ss_pred             CcccCcchhhhcChHHHHHhHhhccC
Q psy6676          84 PYNCAACGKVFRRNCDLRRHSLTHNL  109 (144)
Q Consensus        84 ~~~C~~C~~~f~~~~~l~~H~~~h~~  109 (144)
                      +|.|..|++.|.....|..|+++|+.
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            46788888888888888888877753

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.26  E-value=4.1e-07  Score=40.44  Aligned_cols=27  Identities=33%  Similarity=0.562  Sum_probs=19.7

Q ss_pred             CCcccCcchhhhcChHHHHHhHhhccC
Q psy6676          83 KPYNCAACGKVFRRNCDLRRHSLTHNL  109 (144)
Q Consensus        83 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  109 (144)
                      ++|.|..|++.|.....|..|+++|..
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHEN   27 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGS
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcC
Confidence            357777777777777777777777654

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.26  E-value=3.8e-07  Score=40.41  Aligned_cols=27  Identities=30%  Similarity=0.513  Sum_probs=20.2

Q ss_pred             CCcccCcchhhhcChHHHHHhHhhccC
Q psy6676          83 KPYNCAACGKVFRRNCDLRRHSLTHNL  109 (144)
Q Consensus        83 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  109 (144)
                      ++|.|..|++.|.....|..|+++|+.
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIA   27 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHS
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhcc
Confidence            367777788888877788888777754

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.58  E-value=1.2e-07  Score=41.30  Aligned_cols=25  Identities=44%  Similarity=0.885  Sum_probs=20.6

Q ss_pred             CCcccCcchhhhcChHHHHHhHhhc
Q psy6676          83 KPYNCAACGKVFRRNCDLRRHSLTH  107 (144)
Q Consensus        83 ~~~~C~~C~~~f~~~~~l~~H~~~h  107 (144)
                      ++|.|..|++.|.....|..|+++|
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            4688888888888888888888776

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.24  E-value=7e-07  Score=40.72  Aligned_cols=27  Identities=48%  Similarity=0.965  Sum_probs=20.1

Q ss_pred             CCcccC--cchhhhcChHHHHHhHhhccC
Q psy6676          83 KPYNCA--ACGKVFRRNCDLRRHSLTHNL  109 (144)
Q Consensus        83 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~  109 (144)
                      ++|.|.  .|++.|.....|..|+++|..
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~   30 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccC
Confidence            567777  677777777777777777764

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.24  E-value=1.5e-06  Score=47.10  Aligned_cols=41  Identities=22%  Similarity=0.244  Sum_probs=30.5

Q ss_pred             ccCCCCcccccccccccCChHHHHHHHHHhCCCCCccccccc
Q psy6676          22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCS   63 (144)
Q Consensus        22 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~   63 (144)
                      .+.+++||.|..|++.|.....|..|++.|.+.. ..+.+++
T Consensus         7 ~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~-~~~~~~~   47 (66)
T 2epp_A            7 GLREAGILPCGLCGKVFTDANRLRQHEAQHGVTS-LQLGYID   47 (66)
T ss_dssp             SCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS-CCCCSCC
T ss_pred             CCCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc-ccccccc
Confidence            4667888888888888888888888888888753 3444443

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.22  E-value=4.8e-07  Score=40.10  Aligned_cols=27  Identities=37%  Similarity=0.749  Sum_probs=20.7

Q ss_pred             CCcccCcchhhhcChHHHHHhHhhccC
Q psy6676          83 KPYNCAACGKVFRRNCDLRRHSLTHNL  109 (144)
Q Consensus        83 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  109 (144)
                      ++|.|..|++.|.....|..|+++|..
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSG   27 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHT
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcC
Confidence            367788888888888888888877754

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.22  E-value=1.6e-06  Score=38.34  Aligned_cols=27  Identities=26%  Similarity=0.586  Sum_probs=18.3

Q ss_pred             CcccccccccccCChHHHHHHHHHhCC
Q psy6676          27 KPFKCTECGKGFCQSRTLAVHKILHLE   53 (144)
Q Consensus        27 ~~~~C~~C~~~f~~~~~l~~h~~~~~~   53 (144)
                      +||.|+.|++.|.....|..|++.|.+
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTN   27 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcC
Confidence            356677777777777777777666654

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.21  E-value=1.1e-06  Score=39.10  Aligned_cols=27  Identities=30%  Similarity=0.668  Sum_probs=18.1

Q ss_pred             CcccccccccccCChHHHHHHHHHhCC
Q psy6676          27 KPFKCTECGKGFCQSRTLAVHKILHLE   53 (144)
Q Consensus        27 ~~~~C~~C~~~f~~~~~l~~h~~~~~~   53 (144)
                      +||.|..|++.|.....|..|++.|.+
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~   28 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDT   28 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhcc
Confidence            566677777777776667777666654

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.51  E-value=1.8e-07  Score=41.99  Aligned_cols=27  Identities=37%  Similarity=0.684  Sum_probs=21.6

Q ss_pred             CCcccCcchhhhcChHHHHHhHhhccC
Q psy6676          83 KPYNCAACGKVFRRNCDLRRHSLTHNL  109 (144)
Q Consensus        83 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  109 (144)
                      ++|.|..|++.|.....|..|+++|+.
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTG   28 (30)
Confidence            578888888888888888888887764

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.19  E-value=1.1e-07  Score=43.75  Aligned_cols=27  Identities=33%  Similarity=0.550  Sum_probs=18.2

Q ss_pred             CcccCcchhhhcChHHHHHhHhhccCC
Q psy6676          84 PYNCAACGKVFRRNCDLRRHSLTHNLG  110 (144)
Q Consensus        84 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  110 (144)
                      +|.|..|++.|.....|..|+++|..+
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~~~H~~~   28 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHIKTAFIV   28 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSSTTSSSSS
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHccC
Confidence            566777777777777777777666544

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.19  E-value=9.7e-07  Score=39.96  Aligned_cols=27  Identities=44%  Similarity=0.901  Sum_probs=19.9

Q ss_pred             CCcccC--cchhhhcChHHHHHhHhhccC
Q psy6676          83 KPYNCA--ACGKVFRRNCDLRRHSLTHNL  109 (144)
Q Consensus        83 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~  109 (144)
                      ++|.|.  .|++.|.....|..|+++|..
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~   29 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTG   29 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcC
Confidence            367776  788888887788888777764

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.18  E-value=1e-06  Score=39.07  Aligned_cols=27  Identities=41%  Similarity=0.760  Sum_probs=16.3

Q ss_pred             CcccccccccccCChHHHHHHHHHhCC
Q psy6676          27 KPFKCTECGKGFCQSRTLAVHKILHLE   53 (144)
Q Consensus        27 ~~~~C~~C~~~f~~~~~l~~h~~~~~~   53 (144)
                      +||.|+.|++.|.....|..|++.|.+
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHEN   27 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGS
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcC
Confidence            356666666666666666666655544

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.48  E-value=2.1e-07  Score=41.50  Aligned_cols=27  Identities=37%  Similarity=0.714  Sum_probs=20.7

Q ss_pred             CCcccCcchhhhcChHHHHHhHhhccC
Q psy6676          83 KPYNCAACGKVFRRNCDLRRHSLTHNL  109 (144)
Q Consensus        83 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  109 (144)
                      ++|.|..|++.|.....|..|+++|+.
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTG   27 (29)
Confidence            357788888888888888888877754

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.16  E-value=2e-06  Score=38.23  Aligned_cols=27  Identities=19%  Similarity=0.337  Sum_probs=17.5

Q ss_pred             cccccccccccCChHHHHHHHHHhCCC
Q psy6676          28 PFKCTECGKGFCQSRTLAVHKILHLEE   54 (144)
Q Consensus        28 ~~~C~~C~~~f~~~~~l~~h~~~~~~~   54 (144)
                      +|.|..|++.|.....|..|++.|.+.
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   28 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHccC
Confidence            566666666666666666666666544

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.15  E-value=1.1e-07  Score=43.77  Aligned_cols=30  Identities=23%  Similarity=0.534  Sum_probs=17.9

Q ss_pred             CcccccccccccCchHHHHHHhhcCCCCCc
Q psy6676          56 PHKCPVCSRSFNQRSNLKTHLLTHTDIKPY   85 (144)
Q Consensus        56 ~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~   85 (144)
                      +|.|..|++.|.....|..|++.|+++++|
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            455666666666666666666666655554

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.13  E-value=1.6e-06  Score=38.32  Aligned_cols=28  Identities=46%  Similarity=0.806  Sum_probs=18.7

Q ss_pred             CcccccccccccCChHHHHHHHHHhCCC
Q psy6676          27 KPFKCTECGKGFCQSRTLAVHKILHLEE   54 (144)
Q Consensus        27 ~~~~C~~C~~~f~~~~~l~~h~~~~~~~   54 (144)
                      +||.|..|++.|.....|..|++.|.+.
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCC
Confidence            3566777777777777777776666543

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.12  E-value=1.7e-06  Score=38.13  Aligned_cols=27  Identities=37%  Similarity=0.679  Sum_probs=16.9

Q ss_pred             CcccccccccccCChHHHHHHHHHhCC
Q psy6676          27 KPFKCTECGKGFCQSRTLAVHKILHLE   53 (144)
Q Consensus        27 ~~~~C~~C~~~f~~~~~l~~h~~~~~~   53 (144)
                      +||.|+.|++.|.....|..|++.|.+
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIA   27 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHS
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhcc
Confidence            356666666666666666666666554

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.11  E-value=1.6e-06  Score=38.16  Aligned_cols=26  Identities=31%  Similarity=0.819  Sum_probs=17.1

Q ss_pred             CcccccccccccCChHHHHHHHHHhC
Q psy6676          27 KPFKCTECGKGFCQSRTLAVHKILHL   52 (144)
Q Consensus        27 ~~~~C~~C~~~f~~~~~l~~h~~~~~   52 (144)
                      ++|.|..|++.|.....|..|++.|.
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhcC
Confidence            46667777777776666666666554

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.11  E-value=2e-06  Score=37.54  Aligned_cols=25  Identities=28%  Similarity=0.533  Sum_probs=17.1

Q ss_pred             CcccccccccccCChHHHHHHHHHh
Q psy6676          27 KPFKCTECGKGFCQSRTLAVHKILH   51 (144)
Q Consensus        27 ~~~~C~~C~~~f~~~~~l~~h~~~~   51 (144)
                      +||.|..|++.|.....|..|++.|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHc
Confidence            5667777777777777777776654

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.09  E-value=1.4e-06  Score=43.68  Aligned_cols=34  Identities=29%  Similarity=0.527  Sum_probs=25.7

Q ss_pred             cccCCCCccccc--ccccccCChHHHHHHHHHhCCC
Q psy6676          21 YIHSKEKPFKCT--ECGKGFCQSRTLAVHKILHLEE   54 (144)
Q Consensus        21 ~~h~~~~~~~C~--~C~~~f~~~~~l~~h~~~~~~~   54 (144)
                      ..|.+++||.|.  .|++.|.....|..|++.|.+.
T Consensus        11 ~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A           11 VKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             CEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             hccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            457778888885  6888888888888888777654

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.07  E-value=1.6e-06  Score=37.98  Aligned_cols=25  Identities=24%  Similarity=0.562  Sum_probs=16.0

Q ss_pred             CcccccccccccCChHHHHHHHHHh
Q psy6676          27 KPFKCTECGKGFCQSRTLAVHKILH   51 (144)
Q Consensus        27 ~~~~C~~C~~~f~~~~~l~~h~~~~   51 (144)
                      +||.|..|++.|.....|..|++.|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhc
Confidence            4666666666666666666665544

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.07  E-value=1.5e-06  Score=38.86  Aligned_cols=25  Identities=36%  Similarity=0.728  Sum_probs=16.8

Q ss_pred             CcccCcchhhhcChHHHHHh-Hhhcc
Q psy6676          84 PYNCAACGKVFRRNCDLRRH-SLTHN  108 (144)
Q Consensus        84 ~~~C~~C~~~f~~~~~l~~H-~~~h~  108 (144)
                      +|.|..|++.|.....|..| +++|.
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~   27 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHS   27 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHcc
Confidence            56677777777777777777 45554

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.06  E-value=3.7e-06  Score=37.93  Aligned_cols=26  Identities=50%  Similarity=0.843  Sum_probs=15.6

Q ss_pred             ccccc--ccccccCChHHHHHHHHHhCC
Q psy6676          28 PFKCT--ECGKGFCQSRTLAVHKILHLE   53 (144)
Q Consensus        28 ~~~C~--~C~~~f~~~~~l~~h~~~~~~   53 (144)
                      ||.|+  .|++.|.....|..|++.|.+
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~   29 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHTG   29 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhcC
Confidence            55665  566666666666666655554

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.05  E-value=4.3e-06  Score=37.92  Aligned_cols=27  Identities=37%  Similarity=0.811  Sum_probs=15.1

Q ss_pred             Cccccc--ccccccCChHHHHHHHHHhCC
Q psy6676          27 KPFKCT--ECGKGFCQSRTLAVHKILHLE   53 (144)
Q Consensus        27 ~~~~C~--~C~~~f~~~~~l~~h~~~~~~   53 (144)
                      +||.|.  .|++.|.....|..|++.|.+
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~   30 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccC
Confidence            455555  555555555555555555544

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.28  E-value=7.1e-07  Score=39.70  Aligned_cols=26  Identities=38%  Similarity=0.753  Sum_probs=15.3

Q ss_pred             cccccccccccCChHHHHHHHHHhCC
Q psy6676          28 PFKCTECGKGFCQSRTLAVHKILHLE   53 (144)
Q Consensus        28 ~~~C~~C~~~f~~~~~l~~h~~~~~~   53 (144)
                      ||.|..|++.|.....|..|++.|.+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQHTG   27 (29)
Confidence            55666666666666666666555543

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.01  E-value=2.2e-06  Score=37.83  Aligned_cols=26  Identities=35%  Similarity=0.732  Sum_probs=20.8

Q ss_pred             CCcccC--cchhhhcChHHHHHhHhhcc
Q psy6676          83 KPYNCA--ACGKVFRRNCDLRRHSLTHN  108 (144)
Q Consensus        83 ~~~~C~--~C~~~f~~~~~l~~H~~~h~  108 (144)
                      ++|.|.  .|++.|.....|..|+++|.
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            357888  88888888888888888775

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.99  E-value=4e-06  Score=36.37  Aligned_cols=24  Identities=29%  Similarity=0.733  Sum_probs=13.3

Q ss_pred             ccccccccccCChHHHHHHHHHhC
Q psy6676          29 FKCTECGKGFCQSRTLAVHKILHL   52 (144)
Q Consensus        29 ~~C~~C~~~f~~~~~l~~h~~~~~   52 (144)
                      |.|..|++.|.....|..|++.|.
T Consensus         2 ~~C~~C~k~f~~~~~l~~H~~~h~   25 (27)
T 1znf_A            2 YKCGLCERSFVEKSALSRHQRVHK   25 (27)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             ccCCCCCCcCCCHHHHHHHHHHcC
Confidence            455555555555555555555543

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.23  E-value=9e-07  Score=39.54  Aligned_cols=27  Identities=30%  Similarity=0.698  Sum_probs=16.4

Q ss_pred             CcccccccccccCChHHHHHHHHHhCC
Q psy6676          27 KPFKCTECGKGFCQSRTLAVHKILHLE   53 (144)
Q Consensus        27 ~~~~C~~C~~~f~~~~~l~~h~~~~~~   53 (144)
                      +||.|..|++.|.....|..|++.|.+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTG   28 (30)
Confidence            456666666666666666666655543

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.13  E-value=1.5e-06  Score=37.53  Aligned_cols=25  Identities=52%  Similarity=0.903  Sum_probs=15.1

Q ss_pred             CcccccccccccCChHHHHHHHHHh
Q psy6676          27 KPFKCTECGKGFCQSRTLAVHKILH   51 (144)
Q Consensus        27 ~~~~C~~C~~~f~~~~~l~~h~~~~   51 (144)
                      +||.|+.|++.|.....|..|++.|
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            3566666666666666666665544

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.89  E-value=1e-05  Score=35.94  Aligned_cols=20  Identities=25%  Similarity=0.685  Sum_probs=10.2

Q ss_pred             cccccccccccCChHHHHHH
Q psy6676          28 PFKCTECGKGFCQSRTLAVH   47 (144)
Q Consensus        28 ~~~C~~C~~~f~~~~~l~~h   47 (144)
                      ||.|..|++.|.....|..|
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H   21 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRH   21 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHH
T ss_pred             CcCCcccCcccCChHHHHHH
Confidence            44555555555555555555

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.74  E-value=1.8e-05  Score=34.65  Aligned_cols=25  Identities=36%  Similarity=0.825  Sum_probs=15.8

Q ss_pred             ccccc--ccccccCChHHHHHHHHHhC
Q psy6676          28 PFKCT--ECGKGFCQSRTLAVHKILHL   52 (144)
Q Consensus        28 ~~~C~--~C~~~f~~~~~l~~h~~~~~   52 (144)
                      +|.|.  .|++.|.....|..|++.|.
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            56666  66666666666666665554

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.57  E-value=0.00011  Score=39.36  Aligned_cols=24  Identities=17%  Similarity=0.391  Sum_probs=14.0

Q ss_pred             CcccC--cchhhhcChHHHHHhHhhc
Q psy6676          84 PYNCA--ACGKVFRRNCDLRRHSLTH  107 (144)
Q Consensus        84 ~~~C~--~C~~~f~~~~~l~~H~~~h  107 (144)
                      .|.|.  .|++.+.....|..|++..
T Consensus        38 ~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A           38 PLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CCEeeCCCCcCCCCChHHHHhhcccc
Confidence            45664  4666555556666666543

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.53  E-value=0.00019  Score=38.45  Aligned_cols=48  Identities=19%  Similarity=0.357  Sum_probs=40.0

Q ss_pred             cccccccCChHHHHHHHH-HhCCCC------Ccccc--cccccccCchHHHHHHhhc
Q psy6676          32 TECGKGFCQSRTLAVHKI-LHLEES------PHKCP--VCSRSFNQRSNLKTHLLTH   79 (144)
Q Consensus        32 ~~C~~~f~~~~~l~~h~~-~~~~~~------~~~C~--~C~~~~~~~~~l~~h~~~h   79 (144)
                      ..|++.|.+...|..|+. .|.+.+      .|.|.  .|++.+.....|..|++..
T Consensus         7 ~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            7 KECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             TTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            349999999999999984 677655      78997  4999888888999998753

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=97.24  E-value=5e-05  Score=45.97  Aligned_cols=30  Identities=20%  Similarity=0.317  Sum_probs=26.6

Q ss_pred             hhcCCCCCcccCcchhhhcChHHHHHhHhh
Q psy6676          77 LTHTDIKPYNCAACGKVFRRNCDLRRHSLT  106 (144)
Q Consensus        77 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  106 (144)
                      ..++|+++|.|..|++.|.+...|..|+++
T Consensus        43 ed~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           43 PDLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             ccCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            457888999999999999999999999864

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.81  E-value=0.00026  Score=43.25  Aligned_cols=76  Identities=12%  Similarity=0.199  Sum_probs=49.9

Q ss_pred             CCcccccccccccCChHHHHHHH--HHhCCC-CCccccc------ccccccCchHHHHHHhhcCCCCCcccCcchhhhcC
Q psy6676          26 EKPFKCTECGKGFCQSRTLAVHK--ILHLEE-SPHKCPV------CSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRR   96 (144)
Q Consensus        26 ~~~~~C~~C~~~f~~~~~l~~h~--~~~~~~-~~~~C~~------C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~   96 (144)
                      .+++.|.+|+..|.+...+..|.  +.|... +.+.+..      -+..+...    .+...+.....|.|..|.+.|.+
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~C~~C~~~f~s  105 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAA----PAEISDGEDRSKCCPVCNMTFSS  105 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCC----SSCCSSCCCTTTEETTTTEECSS
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCC----ccccccCCCCCeEcCCCCCEeCC
Confidence            46789999999999999999997  334321 1122110      01122111    12223456678999999999999


Q ss_pred             hHHHHHhHh
Q psy6676          97 NCDLRRHSL  105 (144)
Q Consensus        97 ~~~l~~H~~  105 (144)
                      ...+..|..
T Consensus       106 ~~~~~~H~~  114 (127)
T 1zu1_A          106 PVVAESHYI  114 (127)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHHC
Confidence            999999974

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.69  E-value=0.00049  Score=41.64  Aligned_cols=32  Identities=19%  Similarity=0.215  Sum_probs=21.8

Q ss_pred             ccccccCCCCcccccccccccCChHHHHHHHH
Q psy6676          18 AQGYIHSKEKPFKCTECGKGFCQSRTLAVHKI   49 (144)
Q Consensus        18 ~~~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~   49 (144)
                      ....-|.|.++|.|..|++.|.+...|..|.+
T Consensus        40 ~~ded~tGekpfyC~~C~K~F~~~~~L~~H~r   71 (124)
T 1zr9_A           40 EFDPDLPGGGLHRCLACARYFIDSTNLKTHFR   71 (124)
T ss_dssp             SSCSSSGGGGCSEETTTTEECSSHHHHHHHTT
T ss_pred             cccccCCCCcceEcccCcchhCCHHHHHHHHh
Confidence            33455667777777777777777777777754

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.27  E-value=0.0063  Score=30.02  Aligned_cols=26  Identities=27%  Similarity=0.348  Sum_probs=17.3

Q ss_pred             CCcccCcchhhhcChHHHHHhHhhcc
Q psy6676          83 KPYNCAACGKVFRRNCDLRRHSLTHN  108 (144)
Q Consensus        83 ~~~~C~~C~~~f~~~~~l~~H~~~h~  108 (144)
                      ..|.|+.|+..|.....|+.|++-.-
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~HmkycC   36 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYCC   36 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHHC
T ss_pred             CceeCCcccccccchHHHHhhhhhcC
Confidence            45667777777777777777776543

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.79  E-value=0.0075  Score=29.74  Aligned_cols=24  Identities=21%  Similarity=0.342  Sum_probs=20.8

Q ss_pred             CcccccccccccCChHHHHHHHHH
Q psy6676          27 KPFKCTECGKGFCQSRTLAVHKIL   50 (144)
Q Consensus        27 ~~~~C~~C~~~f~~~~~l~~h~~~   50 (144)
                      .+|.|+.|+..|.....|..|++.
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmky   34 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCY   34 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhhh
Confidence            678899999999999999999873

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=94.16  E-value=0.03  Score=25.75  Aligned_cols=25  Identities=20%  Similarity=0.362  Sum_probs=19.0

Q ss_pred             CcccCcchhhhcChHHHHHhHhhcc
Q psy6676          84 PYNCAACGKVFRRNCDLRRHSLTHN  108 (144)
Q Consensus        84 ~~~C~~C~~~f~~~~~l~~H~~~h~  108 (144)
                      .|.|+.|.+.|.+...|..|-...|
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H   29 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVH   29 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhcc
Confidence            4778888888888888888876544

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=92.11  E-value=0.16  Score=32.18  Aligned_cols=76  Identities=22%  Similarity=0.375  Sum_probs=49.7

Q ss_pred             ccccccCChHHHHHHHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCCcccCcchhhhcChHHHHHhHhhccCCCC
Q psy6676          33 ECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTHNLGSA  112 (144)
Q Consensus        33 ~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  112 (144)
                      .|+..+. ...+..|...-. -.+..|+.|+..+ ....+..|....-..+...|..|+..+.. ..+..|...+.++.+
T Consensus        89 GC~~~~~-~~~l~~H~~~C~-~~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~~-~~l~~H~~~~~~~~~  164 (170)
T 3hcs_A           89 GCLHKME-LRHLEDHQAHCE-FALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMAF-EDKEIHDQNCPLALE  164 (170)
T ss_dssp             TCCCEEE-GGGHHHHHTTCT-TSEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEEG-GGHHHHHTTCCC---
T ss_pred             CCCceec-HhHHHHHHhcCC-ceeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccCH-HHHHhHHHhCcChhh
Confidence            4655443 345666653222 2446788888766 45678889877777788889999887755 467888887766543

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=90.97  E-value=0.19  Score=22.48  Aligned_cols=25  Identities=20%  Similarity=0.328  Sum_probs=18.3

Q ss_pred             cccCcchhhhcChHHHHHhHhhccC
Q psy6676          85 YNCAACGKVFRRNCDLRRHSLTHNL  109 (144)
Q Consensus        85 ~~C~~C~~~f~~~~~l~~H~~~h~~  109 (144)
                      .-|..|.+.|+.-.+|..|.+--|.
T Consensus        10 qhcrfckkkysdvknlikhire~hd   34 (37)
T 2elu_A           10 QHCRFCKKKYSDVKNLIKHIRDAHD   34 (37)
T ss_dssp             CEETTTTEECSSHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            3577888888888888888775443

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=89.99  E-value=0.26  Score=31.13  Aligned_cols=56  Identities=16%  Similarity=0.311  Sum_probs=41.2

Q ss_pred             CcccccccccccCChHHHHHHHHHhCCCCCcccccccccccCchHHHHHHhhcCCCCC
Q psy6676          27 KPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHTDIKP   84 (144)
Q Consensus        27 ~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~   84 (144)
                      .+..|+.|+..+ ....|..|....=..+...|..|+..+.. ..+..|...+.|+.+
T Consensus       109 ~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~~-~~l~~H~~~~~~~~~  164 (170)
T 3hcs_A          109 ALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMAF-EDKEIHDQNCPLALE  164 (170)
T ss_dssp             SEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEEG-GGHHHHHTTCCC---
T ss_pred             eeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccCH-HHHHhHHHhCcChhh
Confidence            456799999887 55679999866555667789999887754 568899988887654

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=89.53  E-value=0.12  Score=29.03  Aligned_cols=21  Identities=43%  Similarity=0.898  Sum_probs=11.9

Q ss_pred             cccCcchhhhcChHHHHHhHhhcc
Q psy6676          85 YNCAACGKVFRRNCDLRRHSLTHN  108 (144)
Q Consensus        85 ~~C~~C~~~f~~~~~l~~H~~~h~  108 (144)
                      ..|..||+.|..   |.+|+.++|
T Consensus        22 iiClecGK~fK~---LkRHL~~~h   42 (87)
T 2jsp_A           22 IVCLECGGSFKS---LKRHLTTHH   42 (87)
T ss_dssp             EECTBTCCEESB---HHHHHHHTT
T ss_pred             eEecccchhhHH---HHHHHHHcc
Confidence            456666666653   446666644

>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A

Probab=87.58  E-value=0.22  Score=21.70  Aligned_cols=23  Identities=17%  Similarity=0.332  Sum_probs=19.0

Q ss_pred             CcccCcchhhhcChHHHHHhHhh
Q psy6676          84 PYNCAACGKVFRRNCDLRRHSLT  106 (144)
Q Consensus        84 ~~~C~~C~~~f~~~~~l~~H~~~  106 (144)
                      .|.|++|.........++.|-.-
T Consensus         3 k~~CpvCk~q~Pd~kt~~~H~e~   25 (28)
T 2jvx_A            3 DFCCPKCQYQAPDMDTLQIHVME   25 (28)
T ss_dssp             CEECTTSSCEESSHHHHHHHHHH
T ss_pred             cccCccccccCcChHHHHHHHHH
Confidence            47899999999999999888653

>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}

Probab=86.65  E-value=0.04  Score=30.37  Aligned_cols=13  Identities=31%  Similarity=0.963  Sum_probs=10.0

Q ss_pred             CcccCcchhhhcC
Q psy6676          84 PYNCAACGKVFRR   96 (144)
Q Consensus        84 ~~~C~~C~~~f~~   96 (144)
                      .|+|+.||.-|.-
T Consensus        51 ~FkCP~CgEEFyG   63 (95)
T 2k5c_A           51 VFKCPVCGEEFYG   63 (95)
T ss_dssp             EEECTTTCCEEET
T ss_pred             hhcCCCccHHHhc
Confidence            4899999877643

>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A

Probab=86.56  E-value=0.22  Score=32.67  Aligned_cols=24  Identities=25%  Similarity=0.605  Sum_probs=14.7

Q ss_pred             CcccccccccccCchHHHHHHhhcCCCCCcccCcchh
Q psy6676          56 PHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGK   92 (144)
Q Consensus        56 ~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~   92 (144)
                      .|.|.+||..+.             +..|+.|++|+-
T Consensus       171 ~~~C~~CG~i~~-------------g~~p~~CP~C~~  194 (202)
T 1yuz_A          171 FHLCPICGYIHK-------------GEDFEKCPICFR  194 (202)
T ss_dssp             EEECSSSCCEEE-------------SSCCSBCTTTCC
T ss_pred             EEEECCCCCEEc-------------CcCCCCCCCCCC
Confidence            467777776653             135577777763

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=85.36  E-value=0.65  Score=21.39  Aligned_cols=24  Identities=17%  Similarity=0.227  Sum_probs=16.7

Q ss_pred             CCcccCcchhhhcChHHHHHhHhh
Q psy6676          83 KPYNCAACGKVFRRNCDLRRHSLT  106 (144)
Q Consensus        83 ~~~~C~~C~~~f~~~~~l~~H~~~  106 (144)
                      ..+.|..|+-.|.+...+..|++-
T Consensus         7 ~~~~C~~C~IsF~~l~ty~aHKk~   30 (36)
T 1fu9_A            7 MKKYCSTCDISFNYVKTYLAHKQF   30 (36)
T ss_dssp             CCSEETTTTEECSSHHHHHHHHHH
T ss_pred             CcCeeccccceehhhHHHhhhhee
Confidence            446777777777777777777653

>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1

Probab=85.28  E-value=0.25  Score=24.28  Aligned_cols=10  Identities=30%  Similarity=1.125  Sum_probs=4.8

Q ss_pred             cccccccccc
Q psy6676          29 FKCTECGKGF   38 (144)
Q Consensus        29 ~~C~~C~~~f   38 (144)
                      |.|..||..|
T Consensus         5 y~C~vCGyvy   14 (46)
T 6rxn_A            5 YVCNVCGYEY   14 (46)
T ss_dssp             EEETTTCCEE
T ss_pred             EECCCCCeEE
Confidence            4455555444

>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82

Probab=84.13  E-value=0.53  Score=27.40  Aligned_cols=28  Identities=25%  Similarity=0.586  Sum_probs=17.0

Q ss_pred             CCcccccccccccCchHHHHHHhhcCCCCCcccCcchhh
Q psy6676          55 SPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKV   93 (144)
Q Consensus        55 ~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~   93 (144)
                      .++.|..||..|.           ....+|-+|+.|+..
T Consensus        66 ~p~~C~~CG~~F~-----------~~~~kPsrCP~CkSe   93 (105)
T 2gmg_A           66 KPAQCRKCGFVFK-----------AEINIPSRCPKCKSE   93 (105)
T ss_dssp             CCCBBTTTCCBCC-----------CCSSCCSSCSSSCCC
T ss_pred             ECcChhhCcCeec-----------ccCCCCCCCcCCCCC
Confidence            4677777777761           122355677777653

>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=83.61  E-value=0.39  Score=26.31  Aligned_cols=28  Identities=18%  Similarity=0.354  Sum_probs=21.2

Q ss_pred             CCcccCcchhhhc-------ChHHHHHhHhhccCC
Q psy6676          83 KPYNCAACGKVFR-------RNCDLRRHSLTHNLG  110 (144)
Q Consensus        83 ~~~~C~~C~~~f~-------~~~~l~~H~~~h~~~  110 (144)
                      ....|..|++.+.       .-..|.+|++.+|..
T Consensus        27 ~~A~Ck~C~k~ls~g~~s~~GTS~L~rHL~~~H~~   61 (76)
T 2djr_A           27 QYATCRLCGRQVSRGPGVNVGTTALWKHLKSMHRE   61 (76)
T ss_dssp             SCEEESSSCCBCCCCSSCCSSSCHHHHHHHHTTHH
T ss_pred             CEEECCCCCCccCCCCCCCCchHHHHHHHHHHCHH
Confidence            4568888888886       356899999887754

>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A

Probab=81.40  E-value=0.52  Score=30.00  Aligned_cols=11  Identities=27%  Similarity=0.769  Sum_probs=6.3

Q ss_pred             Ccccccccccc
Q psy6676          56 PHKCPVCSRSF   66 (144)
Q Consensus        56 ~~~C~~C~~~~   66 (144)
                      .|.|.+||..+
T Consensus       138 ~~~C~~CG~i~  148 (170)
T 3pwf_A          138 VYICPICGYTA  148 (170)
T ss_dssp             EEECTTTCCEE
T ss_pred             eeEeCCCCCee
Confidence            35666666554

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=81.12  E-value=0.85  Score=25.06  Aligned_cols=38  Identities=21%  Similarity=0.431  Sum_probs=19.9

Q ss_pred             ccccccccccCChHHHHHHHHHhCCCCCccccccccccc
Q psy6676          29 FKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFN   67 (144)
Q Consensus        29 ~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~   67 (144)
                      |.|..|+..++- ..+..|...-.+-..|.|..|+..|.
T Consensus        11 F~C~~Cgd~lKK-~kv~~H~~~Cr~~~~~SCIDC~~~F~   48 (79)
T 1wjv_A           11 FTCNACGESVKK-IQVEKHVSNCRNCECLSCIDCGKDFW   48 (79)
T ss_dssp             EEESSSCCEEET-THHHHHHHHCTTCCEEEETTTTEEEE
T ss_pred             EEcCCCCCeeec-ccchhHHhhCCCCCcEEecccCCeeC
Confidence            556666655433 33555554444333456666666654

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=80.83  E-value=1.1  Score=26.95  Aligned_cols=25  Identities=16%  Similarity=0.372  Sum_probs=14.4

Q ss_pred             CCCCcccccccccccCChHHHHHHH
Q psy6676          24 SKEKPFKCTECGKGFCQSRTLAVHK   48 (144)
Q Consensus        24 ~~~~~~~C~~C~~~f~~~~~l~~h~   48 (144)
                      .+...|.|..|+.+|.+...+..|.
T Consensus        89 ~~~~~~~C~~C~~~f~s~~~~~~H~  113 (127)
T 1zu1_A           89 GEDRSKCCPVCNMTFSSPVVAESHY  113 (127)
T ss_dssp             CCCTTTEETTTTEECSSHHHHHHHH
T ss_pred             CCCCCeEcCCCCCEeCCHHHHHHHH
Confidence            3444555666666666666666553

>2czr_A TBP-interacting protein; tata-binding protein (TBP), hyperthermophilic archaeon, Zn-finger motif, transcription; 2.30A {Thermococcus kodakarensis} SCOP: c.52.4.1

Probab=80.43  E-value=0.49  Score=30.33  Aligned_cols=39  Identities=26%  Similarity=0.520  Sum_probs=28.3

Q ss_pred             hHHHHHHhhcCCC-------CCcccCcchhhhcChHHHHHhHhhccC
Q psy6676          70 SNLKTHLLTHTDI-------KPYNCAACGKVFRRNCDLRRHSLTHNL  109 (144)
Q Consensus        70 ~~l~~h~~~h~~~-------~~~~C~~C~~~f~~~~~l~~H~~~h~~  109 (144)
                      ..|..|++...-.       +-|+|..||| |..-.+|..|++.|..
T Consensus       133 grlieHlK~~~~~GqDyvFWQFYKCe~CgK-YvDId~~~~Hlk~Hg~  178 (226)
T 2czr_A          133 AALVNHIKNNALAGQDYIFWQFYKCEECGK-YVDIENLEAHLREHGI  178 (226)
T ss_dssp             HHHHHHHHTTCCBTTTEEEEEEEECTTTCC-EEEGGGHHHHHHTTTC
T ss_pred             HHHHHHHHhccccCcceEEEEEEehhhcCc-eecHHHHHHHHHHcCc
Confidence            5677787754321       2379999998 6778899999998753

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	144
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	3e-12
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	1e-08
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	8e-09
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	8e-08
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	0.001
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	8e-09
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	5e-07
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	5e-06
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	5e-08
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	9e-07
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	2e-06
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	3e-07
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	8e-06
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	2e-05
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	1e-06
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	2e-06
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	2e-04
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	2e-06
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	1e-05
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	1e-04
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	3e-06
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	1e-05
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	5e-05
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	4e-06
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	2e-05
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	2e-04
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	5e-06
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	6e-05
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	6e-06
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	3e-04
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	4e-04
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	6e-06
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	6e-05
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	1e-04
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	3e-05
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	6e-05
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	4e-04
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	1e-04
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	1e-04
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	2e-04
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	0.002
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	0.003
d1ubdc4	28	g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger	4e-04
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	4e-04
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	0.002
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	7e-04
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.002
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.004
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	0.001
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	0.003
d2dmda2	26	g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {H	0.001

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.8 bits (134), Expect = 3e-12
 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 26 EKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTH 79
          +K + C +CGK F        H  +HL   P+ C VC + F  + +L  H+  H
Sbjct: 1  DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.6 bits (110), Expect = 1e-08
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 54  ESPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           +  + C  C +SF  +S    H+  H  ++PY C  CGK F+    L  H   H
Sbjct: 1   DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.5 bits (111), Expect = 8e-09
 Identities = 19/39 (48%), Positives = 22/39 (56%), Gaps = 1/39 (2%)

Query: 24 SKEKPFKCTECGKGFCQSRTLAVH-KILHLEESPHKCPV 61
          S  KP+ C  CGKGF +   L  H K +H  E PHKC V
Sbjct: 1  SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.8 bits (104), Expect = 8e-08
 Identities = 10/35 (28%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 54 ESPHKCPVCSRSFNQRSNLKTHL-LTHTDIKPYNC 87
            P+ C  C + F++  +L  H+   HT  +P+ C
Sbjct: 3  GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKC 37

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.7 bits (75), Expect = 0.001
 Identities = 11/21 (52%), Positives = 12/21 (57%)

Query: 83  KPYNCAACGKVFRRNCDLRRH 103
           KPY C +CGK F R   L  H
Sbjct: 4   KPYICQSCGKGFSRPDHLNGH 24

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.1 bits (110), Expect = 8e-09
 Identities = 17/33 (51%), Positives = 21/33 (63%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEE 54
          IHS EKP+ C ECGK F +S  L  H+ +H  E
Sbjct: 1  IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE 33

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.5 bits (98), Expect = 5e-07
 Identities = 11/30 (36%), Positives = 16/30 (53%)

Query: 51 HLEESPHKCPVCSRSFNQRSNLKTHLLTHT 80
          H  E P+ C  C ++F++ S L  H   HT
Sbjct: 2  HSGEKPYGCVECGKAFSRSSILVQHQRVHT 31

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.1 bits (92), Expect = 5e-06
 Identities = 13/29 (44%), Positives = 16/29 (55%)

Query: 79  HTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           H+  KPY C  CGK F R+  L +H   H
Sbjct: 2   HSGEKPYGCVECGKAFSRSSILVQHQRVH 30

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.3 bits (105), Expect = 5e-08
 Identities = 11/34 (32%), Positives = 19/34 (55%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEES 55
           H+ EKP+ C+ C K F Q + L +H   + + +
Sbjct: 2  THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN 35

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.8 bits (96), Expect = 9e-07
 Identities = 10/31 (32%), Positives = 15/31 (48%)

Query: 51 HLEESPHKCPVCSRSFNQRSNLKTHLLTHTD 81
          H  E P+ C  C ++F Q+  L  H   + D
Sbjct: 3  HTGEKPYACSHCDKTFRQKQLLDMHFKRYHD 33

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.0 bits (94), Expect = 2e-06
 Identities = 13/31 (41%), Positives = 17/31 (54%)

Query: 78  THTDIKPYNCAACGKVFRRNCDLRRHSLTHN 108
           THT  KPY C+ C K FR+   L  H   ++
Sbjct: 2   THTGEKPYACSHCDKTFRQKQLLDMHFKRYH 32

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.3 bits (100), Expect = 3e-07
 Identities = 12/30 (40%), Positives = 17/30 (56%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILH 51
           HS EKP++C  C   F QS T+ +H +  
Sbjct: 2  THSGEKPYECYICHARFTQSGTMKMHILQK 31

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.4 bits (90), Expect = 8e-06
 Identities = 10/30 (33%), Positives = 15/30 (50%)

Query: 51 HLEESPHKCPVCSRSFNQRSNLKTHLLTHT 80
          H  E P++C +C   F Q   +K H+L   
Sbjct: 3  HSGEKPYECYICHARFTQSGTMKMHILQKH 32

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (88), Expect = 2e-05
 Identities = 10/30 (33%), Positives = 15/30 (50%)

Query: 78  THTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
           TH+  KPY C  C   F ++  ++ H L  
Sbjct: 2   THSGEKPYECYICHARFTQSGTMKMHILQK 31

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.3 bits (95), Expect = 1e-06
 Identities = 10/26 (38%), Positives = 14/26 (53%)

Query: 26 EKPFKCTECGKGFCQSRTLAVHKILH 51
          +KPF+C  C + F +S  L  H   H
Sbjct: 1  QKPFQCRICMRNFSRSDHLTTHIRTH 26

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.5 bits (93), Expect = 2e-06
 Identities = 11/27 (40%), Positives = 19/27 (70%)

Query: 54 ESPHKCPVCSRSFNQRSNLKTHLLTHT 80
          + P +C +C R+F++  +L TH+ THT
Sbjct: 1  QKPFQCRICMRNFSRSDHLTTHIRTHT 27

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.9 bits (81), Expect = 2e-04
 Identities = 10/25 (40%), Positives = 13/25 (52%)

Query: 83  KPYNCAACGKVFRRNCDLRRHSLTH 107
           KP+ C  C + F R+  L  H  TH
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTH 26

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.1 bits (94), Expect = 2e-06
 Identities = 11/31 (35%), Positives = 19/31 (61%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHL 52
            +  KPF+C +C + F +S  LA+H+  H+
Sbjct: 5  GSTGIKPFQCPDCDRSFSRSDHLALHRKRHM 35

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.8 bits (88), Expect = 1e-05
 Identities = 11/33 (33%), Positives = 14/33 (42%)

Query: 75  HLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
                T IKP+ C  C + F R+  L  H   H
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.1 bits (81), Expect = 1e-04
 Identities = 10/34 (29%), Positives = 14/34 (41%)

Query: 47 HKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHT 80
                   P +CP C RSF++  +L  H   H 
Sbjct: 2  STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM 35

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.8 bits (93), Expect = 3e-06
 Identities = 12/36 (33%), Positives = 17/36 (47%)

Query: 45 AVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTHT 80
             +    E   +KC  C +SF+  S+L  H  THT
Sbjct: 1  GRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHT 36

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.8 bits (88), Expect = 1e-05
 Identities = 12/33 (36%), Positives = 17/33 (51%)

Query: 22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEE 54
             + + +KC ECGK F  S  L+ H+  H  E
Sbjct: 6  QQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE 38

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.3 bits (84), Expect = 5e-05
 Identities = 11/33 (33%), Positives = 15/33 (45%)

Query: 75  HLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
                 + + Y C  CGK F  + DL +H  TH
Sbjct: 3   SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTH 35

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 39.1 bits (92), Expect = 4e-06
 Identities = 10/25 (40%), Positives = 16/25 (64%)

Query: 56 PHKCPVCSRSFNQRSNLKTHLLTHT 80
             C VC+R+F ++ +LK H  +HT
Sbjct: 2  SFVCEVCTRAFARQEHLKRHYRSHT 26

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 36.8 bits (86), Expect = 2e-05
 Identities = 7/25 (28%), Positives = 10/25 (40%)

Query: 27 KPFKCTECGKGFCQSRTLAVHKILH 51
          + F C  C + F +   L  H   H
Sbjct: 1  RSFVCEVCTRAFARQEHLKRHYRSH 25

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 34.9 bits (81), Expect = 2e-04
 Identities = 8/25 (32%), Positives = 13/25 (52%)

Query: 83  KPYNCAACGKVFRRNCDLRRHSLTH 107
           + + C  C + F R   L+RH  +H
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSH 25

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.9 bits (91), Expect = 5e-06
 Identities = 12/30 (40%), Positives = 18/30 (60%)

Query: 58 KCPVCSRSFNQRSNLKTHLLTHTDIKPYNC 87
            P C +SFN + +LK H+  H+D + Y C
Sbjct: 5  PEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.2 bits (84), Expect = 6e-05
 Identities = 12/33 (36%), Positives = 15/33 (45%), Gaps = 2/33 (6%)

Query: 29 FKCTE--CGKGFCQSRTLAVHKILHLEESPHKC 59
          F C E  CGK F   + L  H  LH +   + C
Sbjct: 2  FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.7 bits (91), Expect = 6e-06
 Identities = 13/25 (52%), Positives = 17/25 (68%)

Query: 27 KPFKCTECGKGFCQSRTLAVHKILH 51
          KP+KC ECGK F Q+  L  H+ +H
Sbjct: 1  KPYKCLECGKAFSQNSGLINHQRIH 25

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.1 bits (79), Expect = 3e-04
 Identities = 11/25 (44%), Positives = 15/25 (60%)

Query: 56 PHKCPVCSRSFNQRSNLKTHLLTHT 80
          P+KC  C ++F+Q S L  H   HT
Sbjct: 2  PYKCLECGKAFSQNSGLINHQRIHT 26

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.7 bits (78), Expect = 4e-04
 Identities = 12/25 (48%), Positives = 13/25 (52%)

Query: 83  KPYNCAACGKVFRRNCDLRRHSLTH 107
           KPY C  CGK F +N  L  H   H
Sbjct: 1   KPYKCLECGKAFSQNSGLINHQRIH 25

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.0 bits (91), Expect = 6e-06
 Identities = 9/32 (28%), Positives = 13/32 (40%)

Query: 23 HSKEKPFKCTECGKGFCQSRTLAVHKILHLEE 54
           S ++PF C  C   F      A H  +H + 
Sbjct: 2  SSGKRPFVCRICLSAFTTKANCARHLKVHTDT 33

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.9 bits (83), Expect = 6e-05
 Identities = 10/31 (32%), Positives = 15/31 (48%)

Query: 51 HLEESPHKCPVCSRSFNQRSNLKTHLLTHTD 81
             + P  C +C  +F  ++N   HL  HTD
Sbjct: 2  SSGKRPFVCRICLSAFTTKANCARHLKVHTD 32

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.1 bits (81), Expect = 1e-04
 Identities = 7/29 (24%), Positives = 11/29 (37%)

Query: 79  HTDIKPYNCAACGKVFRRNCDLRRHSLTH 107
            +  +P+ C  C   F    +  RH   H
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLKVH 30

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.6 bits (85), Expect = 3e-05
 Identities = 8/25 (32%), Positives = 12/25 (48%)

Query: 56 PHKCPVCSRSFNQRSNLKTHLLTHT 80
             CP C + F +  +L  H+ TH 
Sbjct: 2  KFACPECPKRFMRSDHLSKHIKTHQ 26

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.8 bits (83), Expect = 6e-05
 Identities = 11/28 (39%), Positives = 14/28 (50%)

Query: 27 KPFKCTECGKGFCQSRTLAVHKILHLEE 54
          K F C EC K F +S  L+ H   H  +
Sbjct: 1  KKFACPECPKRFMRSDHLSKHIKTHQNK 28

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.9 bits (78), Expect = 4e-04
 Identities = 10/25 (40%), Positives = 13/25 (52%)

Query: 83  KPYNCAACGKVFRRNCDLRRHSLTH 107
           K + C  C K F R+  L +H  TH
Sbjct: 1   KKFACPECPKRFMRSDHLSKHIKTH 25

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 35.4 bits (82), Expect = 1e-04
 Identities = 7/29 (24%), Positives = 14/29 (48%), Gaps = 2/29 (6%)

Query: 54 ESPHKCPV--CSRSFNQRSNLKTHLLTHT 80
          + P+ C    C ++F +  +L  H  +H 
Sbjct: 1  DRPYSCDHPGCDKAFVRNHDLIRHKKSHQ 29

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 35.4 bits (82), Expect = 1e-04
 Identities = 10/32 (31%), Positives = 17/32 (53%), Gaps = 2/32 (6%)

Query: 26 EKPFKCTE--CGKGFCQSRTLAVHKILHLEES 55
          ++P+ C    C K F ++  L  HK  H E++
Sbjct: 1  DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA 32

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.6 bits (80), Expect = 2e-04
 Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 2/27 (7%)

Query: 56 PHKC--PVCSRSFNQRSNLKTHLLTHT 80
          PHKC    C +S+++  NLKTHL +HT
Sbjct: 2  PHKCTFEGCRKSYSRLENLKTHLRSHT 28

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 31.9 bits (73), Expect = 0.002
 Identities = 10/27 (37%), Positives = 12/27 (44%), Gaps = 2/27 (7%)

Query: 27 KPFKCTE--CGKGFCQSRTLAVHKILH 51
          KP KCT   C K + +   L  H   H
Sbjct: 1  KPHKCTFEGCRKSYSRLENLKTHLRSH 27

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 31.2 bits (71), Expect = 0.003
 Identities = 9/27 (33%), Positives = 14/27 (51%), Gaps = 2/27 (7%)

Query: 83  KPYNC--AACGKVFRRNCDLRRHSLTH 107
           KP+ C    C K + R  +L+ H  +H
Sbjct: 1   KPHKCTFEGCRKSYSRLENLKTHLRSH 27

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.9 bits (78), Expect = 4e-04
 Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 2/27 (7%)

Query: 56 PHKCPV--CSRSFNQRSNLKTHLLTHT 80
          P+ CP   C++ F Q +NLK+H+LTH 
Sbjct: 2  PYVCPFDGCNKKFAQSTNLKSHILTHA 28

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.4 bits (77), Expect = 4e-04
 Identities = 9/27 (33%), Positives = 15/27 (55%), Gaps = 2/27 (7%)

Query: 56 PHKC--PVCSRSFNQRSNLKTHLLTHT 80
          P+ C    C R F++ ++L  H+  HT
Sbjct: 2  PYACPVESCDRRFSRSADLTRHIRIHT 28

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 31.9 bits (73), Expect = 0.002
 Identities = 8/27 (29%), Positives = 13/27 (48%), Gaps = 2/27 (7%)

Query: 27 KPFKCTE--CGKGFCQSRTLAVHKILH 51
          +P+ C    C + F +S  L  H  +H
Sbjct: 1  RPYACPVESCDRRFSRSADLTRHIRIH 27

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.1 bits (76), Expect = 7e-04
 Identities = 9/27 (33%), Positives = 12/27 (44%), Gaps = 2/27 (7%)

Query: 56 PHKC--PVCSRSFNQRSNLKTHLLTHT 80
          P  C    C + F +   L+ H  THT
Sbjct: 2  PFMCTWSYCGKRFTRSDELQRHKRTHT 28

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 31.9 bits (73), Expect = 0.002
 Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 2/27 (7%)

Query: 27 KPFKCT--ECGKGFCQSRTLAVHKILH 51
          +PF CT   CGK F +S  L  HK  H
Sbjct: 1  RPFMCTWSYCGKRFTRSDELQRHKRTH 27

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 31.1 bits (71), Expect = 0.004
 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 2/27 (7%)

Query: 83  KPYNCAA--CGKVFRRNCDLRRHSLTH 107
           +P+ C    CGK F R+ +L+RH  TH
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTH 27

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.7 bits (75), Expect = 0.001
 Identities = 10/27 (37%), Positives = 15/27 (55%), Gaps = 2/27 (7%)

Query: 56 PHKC--PVCSRSFNQRSNLKTHLLTHT 80
          P +C    C + F+   NL+TH+  HT
Sbjct: 2  PFQCTFEGCGKRFSLDFNLRTHVRIHT 28

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 31.6 bits (72), Expect = 0.003
 Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 2/30 (6%)

Query: 27 KPFKCTE--CGKGFCQSRTLAVHKILHLEE 54
          KPF+CT   CGK F     L  H  +H  +
Sbjct: 1  KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.3 bits (73), Expect = 0.001
 Identities = 13/25 (52%), Positives = 18/25 (72%)

Query: 56 PHKCPVCSRSFNQRSNLKTHLLTHT 80
          PHKC VC + F+++  LKTH+  HT
Sbjct: 1  PHKCEVCGKCFSRKDKLKTHMRCHT 25

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	144
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.66
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.6
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.31
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.29
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.28
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.27
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.2
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.17
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.14
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.13
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.13
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.08
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.08
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.05
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.02
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.98
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.97
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.97
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.96
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.92
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.89
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.88
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.86
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.82
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.78
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.74
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.7
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.67
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.65
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.65
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.58
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.57
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.57
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.57
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.52
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.51
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.5
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.42
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.38
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.29
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.26
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.21
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.14
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.07
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.04
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.02
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.99
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.95
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.88
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.88
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.82
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.81
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.81
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.8
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.69
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.59
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.56
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.52
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.52
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.5
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.49
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.49
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.45
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.44
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.4
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.35
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.29
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.25
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.23
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.19
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.13
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.07
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.06
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.02
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	97.01
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.0
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.98
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.95
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.86
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.83
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.71
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.7
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.62
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.52
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.49
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	96.47
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.44
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.41
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.37
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.34
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	96.19
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.97
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	95.83
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	95.59
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.57
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	95.29
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	94.96
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	94.9
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	94.77
d1y0jb1	36	U-shaped transcription factor, different fingers {	94.68
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	94.29
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	93.71
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	93.58
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	93.41
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	92.58
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	91.99
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	91.7
d1wjpa3	41	Zinc finger protein 295, ZNF295 {Human (Homo sapie	91.43
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	91.23
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	91.04
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	90.51
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	90.41
d1m36a_	33	Monocytic leukemia zinc finger protein Moz {Human	89.03
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	87.16
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	84.8
d2ghfa1	58	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	84.49
d2ak3a2	37	Microbial and mitochondrial ADK, insert "zinc fing	82.26
d2czra1	218	TBP-interacting protein {Thermococcus kodakaraensi	82.01
d2ghfa1	58	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	80.09
d2ghfa2	36	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	80.02

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=2.1e-17  Score=85.70  Aligned_cols=52  Identities=33%  Similarity=0.745  Sum_probs=37.0

Q ss_pred             CCcccccccccccCchHHHHHHhhcCCCCCcccCcchhhhcChHHHHHhHhhc
Q psy6676          55 SPHKCPVCSRSFNQRSNLKTHLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTH  107 (144)
Q Consensus        55 ~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  107 (144)
                      ++|.|. ||+.|.....|..|++.|++++||.|..|+++|.....|..|+++|
T Consensus         2 K~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           2 KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             cCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            566773 7777777777777777777777777777777777777777777665

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=5.1e-16  Score=80.35  Aligned_cols=53  Identities=32%  Similarity=0.706  Sum_probs=50.7

Q ss_pred             CCcccccccccccCChHHHHHHHHHhCCCCCcccccccccccCchHHHHHHhhc
Q psy6676          26 EKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRSFNQRSNLKTHLLTH   79 (144)
Q Consensus        26 ~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h   79 (144)
                      ++||.|. |++.|.....|..|++.|.+.+||.|..|++.|.....|..|++.|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            5899995 9999999999999999999999999999999999999999999876

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=2e-13  Score=65.08  Aligned_cols=37  Identities=30%  Similarity=0.598  Sum_probs=32.9

Q ss_pred             HHHhhcCCCCCcccCcchhhhcChHHHHHhHhhccCC
Q psy6676          74 THLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTHNLG  110 (144)
Q Consensus        74 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  110 (144)
                      .|++.|++++||.|..|||+|...+.|..|+++|+++
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            4778899999999999999999999999999999764

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.29  E-value=6.7e-13  Score=62.34  Aligned_cols=35  Identities=37%  Similarity=0.533  Sum_probs=31.3

Q ss_pred             hhcCCCCCcccCcchhhhcChHHHHHhHhhccCCC
Q psy6676          77 LTHTDIKPYNCAACGKVFRRNCDLRRHSLTHNLGS  111 (144)
Q Consensus        77 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  111 (144)
                      ++|++++||.|..|+++|...+.|..|+++|+.++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~~   35 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN   35 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCCC
Confidence            47899999999999999999999999999998653

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.28  E-value=7e-13  Score=62.71  Aligned_cols=35  Identities=34%  Similarity=0.620  Sum_probs=32.4

Q ss_pred             HHhhcCCCCCcccCcchhhhcChHHHHHhHhhccC
Q psy6676          75 HLLTHTDIKPYNCAACGKVFRRNCDLRRHSLTHNL  109 (144)
Q Consensus        75 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  109 (144)
                      |.+.|++++||.|..|++.|.....|..|+++|..
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            67899999999999999999999999999999864

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.27  E-value=1e-12  Score=60.18  Aligned_cols=33  Identities=39%  Similarity=0.745  Sum_probs=29.3

Q ss_pred             hcCCCCCcccCcchhhhcChHHHHHhHhhccCC
Q psy6676          78 THTDIKPYNCAACGKVFRRNCDLRRHSLTHNLG  110 (144)
Q Consensus        78 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  110 (144)
                      +|++++||.|..||++|...+.|..|+++|..+
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            478999999999999999999999999999764

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.20  E-value=4.1e-12  Score=58.91  Aligned_cols=32  Identities=22%  Similarity=0.478  Sum_probs=28.1

Q ss_pred             cCCCCCcccCcchhhhcChHHHHHhHhhccCC
Q psy6676          79 HTDIKPYNCAACGKVFRRNCDLRRHSLTHNLG  110 (144)
Q Consensus        79 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  110 (144)
                      |+|++||+|.+|++.|.....|+.|+++|...
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            67899999999999999999999999988754

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.17  E-value=5.9e-12  Score=58.95  Aligned_cols=34  Identities=29%  Similarity=0.587  Sum_probs=29.6

Q ss_pred             hhcCCCCCcccCcchhhhcChHHHHHhHhhccCC
Q psy6676          77 LTHTDIKPYNCAACGKVFRRNCDLRRHSLTHNLG  110 (144)
Q Consensus        77 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  110 (144)
                      ++|+|++||+|..|++.|....+|..|++.+|..
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            4689999999999999999999999998776654

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=1.4e-11  Score=58.49  Aligned_cols=34  Identities=29%  Similarity=0.743  Sum_probs=16.7

Q ss_pred             CCcccccccccccCchHHHHHHh-hcCCCCCcccC
Q psy6676          55 SPHKCPVCSRSFNQRSNLKTHLL-THTDIKPYNCA   88 (144)
Q Consensus        55 ~~~~C~~C~~~~~~~~~l~~h~~-~h~~~~~~~C~   88 (144)
                      +||.|..|++.|.....|..|++ .|++++||.|.
T Consensus         4 Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           4 KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            44555555555555555555543 35555555443

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=1.8e-11  Score=55.90  Aligned_cols=33  Identities=52%  Similarity=0.943  Sum_probs=26.6

Q ss_pred             ccCCCCcccccccccccCChHHHHHHHHHhCCC
Q psy6676          22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHLEE   54 (144)
Q Consensus        22 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~   54 (144)
                      ||.|++||.|..|++.|.....|..|++.|+|+
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            577888888888888888888888888888763

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=2.2e-11  Score=57.81  Aligned_cols=37  Identities=46%  Similarity=0.928  Sum_probs=34.0

Q ss_pred             CCCcccccccccccCChHHHHHHHH-HhCCCCCccccc
Q psy6676          25 KEKPFKCTECGKGFCQSRTLAVHKI-LHLEESPHKCPV   61 (144)
Q Consensus        25 ~~~~~~C~~C~~~f~~~~~l~~h~~-~~~~~~~~~C~~   61 (144)
                      -.+||.|..|++.|.....|..|++ .|.+++||.|.+
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            4789999999999999999999986 699999999974

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.08  E-value=1.7e-11  Score=53.86  Aligned_cols=28  Identities=36%  Similarity=0.632  Sum_probs=24.4

Q ss_pred             CCCcccCcchhhhcChHHHHHhHhhccC
Q psy6676          82 IKPYNCAACGKVFRRNCDLRRHSLTHNL  109 (144)
Q Consensus        82 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  109 (144)
                      |+||+|..|++.|.....|..|+++|++
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            5789999999999999999999998863

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=5.6e-11  Score=56.34  Aligned_cols=34  Identities=32%  Similarity=0.721  Sum_probs=24.7

Q ss_pred             ccccCCCCcccccccccccCChHHHHHHHHHhCC
Q psy6676          20 GYIHSKEKPFKCTECGKGFCQSRTLAVHKILHLE   53 (144)
Q Consensus        20 ~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~   53 (144)
                      ..+|.+++||.|+.|++.|.....|..|++.|+|
T Consensus         4 ~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtG   37 (38)
T d2cota2           4 EWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG   37 (38)
T ss_dssp             CSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCC
T ss_pred             CcccCCCCCEecCCCCceeeCHHHHHHhCccCCC
Confidence            3567777777777777777777777777777765

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.05  E-value=8.4e-11  Score=54.97  Aligned_cols=34  Identities=32%  Similarity=0.587  Sum_probs=26.9

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCCC
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLEE   54 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~   54 (144)
                      ++|.|++||.|.+|++.|.....|..|++.|.+.
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            4678888888888888888888888888877653

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.02  E-value=3.4e-11  Score=51.61  Aligned_cols=26  Identities=46%  Similarity=0.963  Sum_probs=23.2

Q ss_pred             CCcccCcchhhhcChHHHHHhHhhcc
Q psy6676          83 KPYNCAACGKVFRRNCDLRRHSLTHN  108 (144)
Q Consensus        83 ~~~~C~~C~~~f~~~~~l~~H~~~h~  108 (144)
                      +||+|..|||+|...+.|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            58999999999999999999999884

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.98  E-value=2.6e-10  Score=53.61  Aligned_cols=33  Identities=33%  Similarity=0.707  Sum_probs=27.0

Q ss_pred             ccccCCCCcccccccccccCChHHHHHHHHHhC
Q psy6676          20 GYIHSKEKPFKCTECGKGFCQSRTLAVHKILHL   52 (144)
Q Consensus        20 ~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~   52 (144)
                      .++|.|++||.|+.|++.|.....|..|++.|.
T Consensus         3 ~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           3 TRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             SSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CCccCCccCeEeCCCCCEecCHHHHHHHHhcCc
Confidence            467888888888888888888888888888775

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.97  E-value=2.4e-10  Score=53.30  Aligned_cols=33  Identities=36%  Similarity=0.623  Sum_probs=27.1

Q ss_pred             cccCCCCcccccccccccCChHHHHHHHHHhCC
Q psy6676          21 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHLE   53 (144)
Q Consensus        21 ~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~   53 (144)
                      ++|.|++||.|+.|++.|.....|..|++.+++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~   33 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHT   33 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccC
Confidence            478889999999999999999889988765543

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.97  E-value=2.7e-10  Score=52.59  Aligned_cols=31  Identities=29%  Similarity=0.543  Sum_probs=22.3

Q ss_pred             cCCCCcccccccccccCChHHHHHHHHHhCC
Q psy6676          23 HSKEKPFKCTECGKGFCQSRTLAVHKILHLE   53 (144)
Q Consensus        23 h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~   53 (144)
                      |.|++||.|.+|++.|.....|..|++.|..
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~   32 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTS
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCC
Confidence            5677777777777777777777777777654

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.96  E-value=1.4e-10  Score=51.39  Aligned_cols=28  Identities=29%  Similarity=0.685  Sum_probs=19.5

Q ss_pred             CCcccCcchhhhcChHHHHHhHhhccCC
Q psy6676          83 KPYNCAACGKVFRRNCDLRRHSLTHNLG  110 (144)
Q Consensus        83 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  110 (144)
                      +||.|.+|++.|.....|.+|+++|+++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgE   28 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSS
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCC
Confidence            4677777777777777777777777654

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.92  E-value=2.6e-10  Score=50.42  Aligned_cols=28  Identities=36%  Similarity=0.621  Sum_probs=19.9

Q ss_pred             CCcccCcchhhhcChHHHHHhHhhccCC
Q psy6676          83 KPYNCAACGKVFRRNCDLRRHSLTHNLG  110 (144)
Q Consensus        83 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  110 (144)
                      +||.|..|++.|...+.|.+|+++|+.+
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~Htge   28 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNK   28 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCc
Confidence            4677777777777777777777777654

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.89  E-value=6.3e-10  Score=49.23  Aligned_cols=28  Identities=29%  Similarity=0.608  Sum_probs=16.3

Q ss_pred             CcccccccccccCChHHHHHHHHHhCCC
Q psy6676          27 KPFKCTECGKGFCQSRTLAVHKILHLEE   54 (144)
Q Consensus        27 ~~~~C~~C~~~f~~~~~l~~h~~~~~~~   54 (144)
                      +||.|++|++.|.....|..|++.|+|+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgE   28 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSS
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCC
Confidence            3555666666666666666666555554

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.88  E-value=4.7e-10  Score=49.10  Aligned_cols=28  Identities=36%  Similarity=0.710  Sum_probs=20.1

Q ss_pred             CCcccccccccccCChHHHHHHHHHhCC
Q psy6676          26 EKPFKCTECGKGFCQSRTLAVHKILHLE   53 (144)
Q Consensus        26 ~~~~~C~~C~~~f~~~~~l~~h~~~~~~   53 (144)
                      ++||.|++|++.|.....|..|++.|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            4677777777777777777777777654

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.86  E-value=9.4e-10  Score=48.58  Aligned_cols=28  Identities=39%  Similarity=0.668  Sum_probs=16.5

Q ss_pred             CcccccccccccCChHHHHHHHHHhCCC
Q psy6676          27 KPFKCTECGKGFCQSRTLAVHKILHLEE   54 (144)
Q Consensus        27 ~~~~C~~C~~~f~~~~~l~~h~~~~~~~   54 (144)
                      |||.|++|++.|.....|..|++.|+++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~Htge   28 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNK   28 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCc
Confidence            4556666666666666666666666554

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.82  E-value=9.6e-11  Score=57.99  Aligned_cols=39  Identities=26%  Similarity=0.489  Sum_probs=30.7

Q ss_pred             HHHHHHhhcCCCCCcccCc--chhhhcChHHHHHhHhhccCC
Q psy6676          71 NLKTHLLTHTDIKPYNCAA--CGKVFRRNCDLRRHSLTHNLG  110 (144)
Q Consensus        71 ~l~~h~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  110 (144)
                      .+..|+. |.+++||.|.+  |++.|...+.|..|+++|..+
T Consensus         6 ~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htge   46 (47)
T d1ncsa_           6 SIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             SGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             hhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCC
Confidence            3445554 88888888876  888888888888888888764

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.78  E-value=1.7e-09  Score=48.08  Aligned_cols=28  Identities=32%  Similarity=0.580  Sum_probs=21.1

Q ss_pred             CCcccCc--chhhhcChHHHHHhHhhccCC
Q psy6676          83 KPYNCAA--CGKVFRRNCDLRRHSLTHNLG  110 (144)
Q Consensus        83 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  110 (144)
                      +||+|..  |++.|...+.|+.|+++|+.+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            4677866  888888888888888877653

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.74  E-value=1.5e-09  Score=50.43  Aligned_cols=27  Identities=41%  Similarity=0.883  Sum_probs=14.1

Q ss_pred             ccccccCchHHHHHHhhcCCCCCcccC
Q psy6676          62 CSRSFNQRSNLKTHLLTHTDIKPYNCA   88 (144)
Q Consensus        62 C~~~~~~~~~l~~h~~~h~~~~~~~C~   88 (144)
                      |++.|.....|..|++.|++++||.|.
T Consensus         9 C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           9 CGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             TCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             CCCeeCChhHhccccCeeCCCCCEeCC
Confidence            555555555555555555555555543

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.70  E-value=2.5e-09  Score=47.54  Aligned_cols=28  Identities=39%  Similarity=0.795  Sum_probs=21.8

Q ss_pred             CCcccCc--chhhhcChHHHHHhHhhccCC
Q psy6676          83 KPYNCAA--CGKVFRRNCDLRRHSLTHNLG  110 (144)
Q Consensus        83 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  110 (144)
                      +||.|..  |++.|.....|..|+++|+.+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            5788865  888888888888888887653

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.67  E-value=6.6e-09  Score=48.19  Aligned_cols=32  Identities=38%  Similarity=0.725  Sum_probs=30.0

Q ss_pred             ccccc--cccccCChHHHHHHHHHhCCCCCcccc
Q psy6676          29 FKCTE--CGKGFCQSRTLAVHKILHLEESPHKCP   60 (144)
Q Consensus        29 ~~C~~--C~~~f~~~~~l~~h~~~~~~~~~~~C~   60 (144)
                      |.|+.  |++.|.....|..|++.|.+++||.|.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            67876  999999999999999999999999996

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.65  E-value=8.1e-09  Score=46.47  Aligned_cols=29  Identities=45%  Similarity=0.827  Sum_probs=23.9

Q ss_pred             CCCcccCc--chhhhcChHHHHHhHhhccCC
Q psy6676          82 IKPYNCAA--CGKVFRRNCDLRRHSLTHNLG  110 (144)
Q Consensus        82 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  110 (144)
                      |+||.|..  |++.|.....|.+|+++|...
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            57888876  899999988999998888753

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.65  E-value=6e-09  Score=44.43  Aligned_cols=25  Identities=52%  Similarity=1.052  Sum_probs=16.0

Q ss_pred             CcccccccccccCChHHHHHHHHHh
Q psy6676          27 KPFKCTECGKGFCQSRTLAVHKILH   51 (144)
Q Consensus        27 ~~~~C~~C~~~f~~~~~l~~h~~~~   51 (144)
                      |||.|.+||+.|.....|..|++.|
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriH   25 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIH   25 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCC
Confidence            4666666666666666666666655

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.58  E-value=2.5e-08  Score=44.16  Aligned_cols=27  Identities=37%  Similarity=0.624  Sum_probs=15.3

Q ss_pred             Ccccccc--cccccCChHHHHHHHHHhCC
Q psy6676          27 KPFKCTE--CGKGFCQSRTLAVHKILHLE   53 (144)
Q Consensus        27 ~~~~C~~--C~~~f~~~~~l~~h~~~~~~   53 (144)
                      +||.|++  |++.|.....|..|++.|+|
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtG   29 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTG   29 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTT
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcC
Confidence            3555555  55555555555555555554

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.57  E-value=1.4e-08  Score=45.44  Aligned_cols=28  Identities=43%  Similarity=0.859  Sum_probs=19.0

Q ss_pred             CCcccC--cchhhhcChHHHHHhHhhccCC
Q psy6676          83 KPYNCA--ACGKVFRRNCDLRRHSLTHNLG  110 (144)
Q Consensus        83 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~  110 (144)
                      +||.|.  .|++.|.....|.+|+++|+.+
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~Htge   30 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCccccc
Confidence            466774  4777777777777777777654

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.57  E-value=1.1e-08  Score=50.41  Aligned_cols=33  Identities=30%  Similarity=0.523  Sum_probs=22.9

Q ss_pred             ccCCCCcccccc--cccccCChHHHHHHHHHhCCC
Q psy6676          22 IHSKEKPFKCTE--CGKGFCQSRTLAVHKILHLEE   54 (144)
Q Consensus        22 ~h~~~~~~~C~~--C~~~f~~~~~l~~h~~~~~~~   54 (144)
                      .|.+++||.|.+  |++.|.....|..|++.|+|+
T Consensus        12 ~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htge   46 (47)
T d1ncsa_          12 KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             hccCCCCeECCcCCCCccccCchHHHhhcccccCC
Confidence            466777777765  777777777777777777664

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.57  E-value=6.4e-09  Score=45.25  Aligned_cols=26  Identities=42%  Similarity=0.925  Sum_probs=21.7

Q ss_pred             CCcccCc--chhhhcChHHHHHhHhhcc
Q psy6676          83 KPYNCAA--CGKVFRRNCDLRRHSLTHN  108 (144)
Q Consensus        83 ~~~~C~~--C~~~f~~~~~l~~H~~~h~  108 (144)
                      +||.|..  |+|.|....+|++|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            5788866  9999999999999988874

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.52  E-value=1.1e-08  Score=44.93  Aligned_cols=26  Identities=42%  Similarity=0.974  Sum_probs=21.6

Q ss_pred             CCcccCc--chhhhcChHHHHHhHhhcc
Q psy6676          83 KPYNCAA--CGKVFRRNCDLRRHSLTHN  108 (144)
Q Consensus        83 ~~~~C~~--C~~~f~~~~~l~~H~~~h~  108 (144)
                      +||+|..  |++.|.....|.+|+++|+
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~Ht   28 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHT   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHH
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccC
Confidence            5788866  8888888888888888875

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.51  E-value=2.9e-08  Score=43.99  Aligned_cols=27  Identities=44%  Similarity=0.802  Sum_probs=17.1

Q ss_pred             Ccccccc--cccccCChHHHHHHHHHhCC
Q psy6676          27 KPFKCTE--CGKGFCQSRTLAVHKILHLE   53 (144)
Q Consensus        27 ~~~~C~~--C~~~f~~~~~l~~h~~~~~~   53 (144)
                      +||.|++  |++.|.....|..|++.|+|
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTG   29 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTG   29 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCC
Confidence            4666655  66666666666666666654

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.50  E-value=5.6e-08  Score=41.45  Aligned_cols=29  Identities=31%  Similarity=0.617  Sum_probs=26.8

Q ss_pred             CCcccccccccccCChHHHHHHHHHhCCC
Q psy6676          26 EKPFKCTECGKGFCQSRTLAVHKILHLEE   54 (144)
Q Consensus        26 ~~~~~C~~C~~~f~~~~~l~~h~~~~~~~   54 (144)
                      ++||.|++|+..|+.+..|..|++.|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            58999999999999999999999999875

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.42  E-value=8.7e-08  Score=42.74  Aligned_cols=21  Identities=33%  Similarity=0.635  Sum_probs=10.4

Q ss_pred             ccccccCchHHHHHHhhcCCC
Q psy6676          62 CSRSFNQRSNLKTHLLTHTDI   82 (144)
Q Consensus        62 C~~~~~~~~~l~~h~~~h~~~   82 (144)
                      |++.|.....|..|++.|+++
T Consensus        10 C~k~F~~~~~L~~H~r~Htge   30 (31)
T d1sp2a_          10 CGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCSSHHHHHHHHTTTSCC
T ss_pred             CCcCcCChhHhhhhcCccccc
Confidence            445555555555555544443

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.38  E-value=7.3e-08  Score=40.47  Aligned_cols=27  Identities=37%  Similarity=0.826  Sum_probs=23.7

Q ss_pred             CCCcccCcchhhhcChHHHHHhHhhcc
Q psy6676          82 IKPYNCAACGKVFRRNCDLRRHSLTHN  108 (144)
Q Consensus        82 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  108 (144)
                      ++||.|.+||+.|......++|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            578999999999999999999988874

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.29  E-value=1.3e-07  Score=41.41  Aligned_cols=27  Identities=30%  Similarity=0.728  Sum_probs=16.7

Q ss_pred             Ccccccc--cccccCChHHHHHHHHHhCC
Q psy6676          27 KPFKCTE--CGKGFCQSRTLAVHKILHLE   53 (144)
Q Consensus        27 ~~~~C~~--C~~~f~~~~~l~~h~~~~~~   53 (144)
                      +||.|++  |++.|.....|..|++.|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            4566655  66666666666666666543

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.26  E-value=4.2e-07  Score=40.69  Aligned_cols=26  Identities=35%  Similarity=0.811  Sum_probs=15.2

Q ss_pred             Ccccccc--cccccCChHHHHHHHHHhC
Q psy6676          27 KPFKCTE--CGKGFCQSRTLAVHKILHL   52 (144)
Q Consensus        27 ~~~~C~~--C~~~f~~~~~l~~h~~~~~   52 (144)
                      +||.|.+  |++.|.....|..|++.|.
T Consensus         2 rP~~C~~pgC~k~F~r~~~L~~H~r~Ht   29 (32)
T d1zfda_           2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQ   29 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGT
T ss_pred             cCeECcCCCCCCeeCCHHHHHHHhhhcc
Confidence            4556655  6666666666666655554

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.21  E-value=4.2e-07  Score=36.89  Aligned_cols=25  Identities=40%  Similarity=0.848  Sum_probs=16.9

Q ss_pred             CcccCcchhhhcChHHHHHhHhhcc
Q psy6676          84 PYNCAACGKVFRRNCDLRRHSLTHN  108 (144)
Q Consensus        84 ~~~C~~C~~~f~~~~~l~~H~~~h~  108 (144)
                      |.+|.+|++-|++...|+-|++.|+
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~ht   25 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHT   25 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccC
Confidence            3467777777777777777776664

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.14  E-value=4.4e-07  Score=39.25  Aligned_cols=25  Identities=40%  Similarity=0.828  Sum_probs=13.5

Q ss_pred             Ccccccc--cccccCChHHHHHHHHHh
Q psy6676          27 KPFKCTE--CGKGFCQSRTLAVHKILH   51 (144)
Q Consensus        27 ~~~~C~~--C~~~f~~~~~l~~h~~~~   51 (144)
                      +||.|++  |++.|.....|..|++.|
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~H   27 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTH   27 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhc
Confidence            3555544  555555555555555554

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.07  E-value=1.3e-06  Score=35.43  Aligned_cols=24  Identities=38%  Similarity=0.686  Sum_probs=11.4

Q ss_pred             ccccccccccCChHHHHHHHHHhC
Q psy6676          29 FKCTECGKGFCQSRTLAVHKILHL   52 (144)
Q Consensus        29 ~~C~~C~~~f~~~~~l~~h~~~~~   52 (144)
                      +.|+.|++.|..+..|..|++.|+
T Consensus         2 hkc~~c~kcfsrkdklk~hmr~ht   25 (26)
T d2dmda2           2 HKCEVCGKCFSRKDKLKTHMRCHT   25 (26)
T ss_dssp             CCBTTTTBCCCCHHHHHHHGGGCC
T ss_pred             CccchhhhHhcchhHHHHHhhccC
Confidence            344445555544444444444443

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.04  E-value=1.9e-06  Score=37.48  Aligned_cols=28  Identities=36%  Similarity=0.827  Sum_probs=13.5

Q ss_pred             ccccccccccCchHHHHHHhhcCCCCCc
Q psy6676          58 KCPVCSRSFNQRSNLKTHLLTHTDIKPY   85 (144)
Q Consensus        58 ~C~~C~~~~~~~~~l~~h~~~h~~~~~~   85 (144)
                      .|.+||+.|.....|.+|.-.|++++||
T Consensus         7 ~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           7 ACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             EETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            4444444444444444444444444443

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.02  E-value=1.6e-06  Score=37.65  Aligned_cols=32  Identities=38%  Similarity=0.573  Sum_probs=29.3

Q ss_pred             CCcccccccccccCChHHHHHHHHHhCCCCCc
Q psy6676          26 EKPFKCTECGKGFCQSRTLAVHKILHLEESPH   57 (144)
Q Consensus        26 ~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~   57 (144)
                      .+...|..||+.|.....|.+|...|.+++||
T Consensus         3 rk~~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           3 RKQVACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             CCSEEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             chhhhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            45678999999999999999999999999987

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.99  E-value=1.6e-06  Score=35.80  Aligned_cols=25  Identities=44%  Similarity=0.820  Sum_probs=18.5

Q ss_pred             cccCcchhhhcChHHHHHhHhhccC
Q psy6676          85 YNCAACGKVFRRNCDLRRHSLTHNL  109 (144)
Q Consensus        85 ~~C~~C~~~f~~~~~l~~H~~~h~~  109 (144)
                      ..|..|||+|...+.|++|+-.|+.
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccC
Confidence            4677777777777777777777764

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.95  E-value=2.6e-06  Score=36.16  Aligned_cols=29  Identities=34%  Similarity=0.732  Sum_probs=22.5

Q ss_pred             CCCcccCcchhhhcChHHHHHhHhhccCC
Q psy6676          82 IKPYNCAACGKVFRRNCDLRRHSLTHNLG  110 (144)
Q Consensus        82 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  110 (144)
                      ++||.|++|...|....-+.-|.+.|..+
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            46788888888888888888888877643

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.88  E-value=5.7e-06  Score=34.58  Aligned_cols=25  Identities=40%  Similarity=0.865  Sum_probs=14.1

Q ss_pred             CcccccccccccCChHHHHHHHHHh
Q psy6676          27 KPFKCTECGKGFCQSRTLAVHKILH   51 (144)
Q Consensus        27 ~~~~C~~C~~~f~~~~~l~~h~~~~   51 (144)
                      +||.|..|++.|.......+|.+.|
T Consensus         2 kPf~C~~CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           2 KPFACDICGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHGGG
T ss_pred             CCcccchhhhhhhcchhhhhhhhhc
Confidence            4555555655555555555555544

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.88  E-value=3.5e-06  Score=34.97  Aligned_cols=28  Identities=25%  Similarity=0.514  Sum_probs=17.1

Q ss_pred             CCCcccCcchhhhcChHHHHHhHhhccC
Q psy6676          82 IKPYNCAACGKVFRRNCDLRRHSLTHNL  109 (144)
Q Consensus        82 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  109 (144)
                      ++||+|..|.+.-...+.|..|++.|++
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CCcceeeecccccCCchheEEeeecccC
Confidence            3566666666666666666666666553

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.82  E-value=8e-06  Score=34.04  Aligned_cols=26  Identities=38%  Similarity=0.589  Sum_probs=15.7

Q ss_pred             cccccccccccCchHHHHHHhhcCCC
Q psy6676          57 HKCPVCSRSFNQRSNLKTHLLTHTDI   82 (144)
Q Consensus        57 ~~C~~C~~~~~~~~~l~~h~~~h~~~   82 (144)
                      |.|..|+..+.-.+.|..|++.|+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            45666666666666666666666554

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.81  E-value=5.6e-06  Score=34.07  Aligned_cols=26  Identities=31%  Similarity=0.692  Sum_probs=22.2

Q ss_pred             CCcccCcchhhhcChHHHHHhHhhcc
Q psy6676          83 KPYNCAACGKVFRRNCDLRRHSLTHN  108 (144)
Q Consensus        83 ~~~~C~~C~~~f~~~~~l~~H~~~h~  108 (144)
                      +||+|..|.++-...+.|..|+++|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            67888888888888888888888875

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.81  E-value=5.2e-06  Score=35.20  Aligned_cols=26  Identities=38%  Similarity=0.746  Sum_probs=20.4

Q ss_pred             CCcccCc--chhhhcChHHHHHhHhhcc
Q psy6676          83 KPYNCAA--CGKVFRRNCDLRRHSLTHN  108 (144)
Q Consensus        83 ~~~~C~~--C~~~f~~~~~l~~H~~~h~  108 (144)
                      +||.|.+  |++.|+..+.|++|++.+|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhC
Confidence            4677865  8888888888888888765

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.80  E-value=6.4e-06  Score=37.51  Aligned_cols=30  Identities=30%  Similarity=0.572  Sum_probs=24.4

Q ss_pred             CCcccCcchhhhcChHHHHHhHhhccCCCC
Q psy6676          83 KPYNCAACGKVFRRNCDLRRHSLTHNLGSA  112 (144)
Q Consensus        83 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  112 (144)
                      +.|.|..|++.|.+..+|--|++.|.....
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~r~   33 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRDRA   33 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCSCT
T ss_pred             CccCCCCCCCccCCcccccchHhhhcchHH
Confidence            568899999999999999999888865543

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.69  E-value=1.4e-05  Score=33.08  Aligned_cols=27  Identities=37%  Similarity=0.728  Sum_probs=14.8

Q ss_pred             CCcccccccccccCchHHHHHHhhcCC
Q psy6676          55 SPHKCPVCSRSFNQRSNLKTHLLTHTD   81 (144)
Q Consensus        55 ~~~~C~~C~~~~~~~~~l~~h~~~h~~   81 (144)
                      +||+|+.|...-.+++.|..|.+.|+|
T Consensus         2 rpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CcceeeecccccCCchheEEeeecccC
Confidence            355555555555555555555555554

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.59  E-value=2.8e-05  Score=35.34  Aligned_cols=29  Identities=21%  Similarity=0.568  Sum_probs=22.8

Q ss_pred             CcccccccccccCChHHHHHHHHHhCCCC
Q psy6676          27 KPFKCTECGKGFCQSRTLAVHKILHLEES   55 (144)
Q Consensus        27 ~~~~C~~C~~~f~~~~~l~~h~~~~~~~~   55 (144)
                      +.|.|.+|++.|.+...|-.|++.|...+
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CccCCCCCCCccCCcccccchHhhhcchH
Confidence            46888888888888888888888886543

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.56  E-value=4.9e-05  Score=31.76  Aligned_cols=27  Identities=22%  Similarity=0.362  Sum_probs=18.9

Q ss_pred             CcccccccccccCChHHHHHHHHHhCC
Q psy6676          27 KPFKCTECGKGFCQSRTLAVHKILHLE   53 (144)
Q Consensus        27 ~~~~C~~C~~~f~~~~~l~~h~~~~~~   53 (144)
                      +||.|+.|........+|..|+++.++
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhs   27 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             CCccccccccccccchhhhhhhhcccc
Confidence            467777777777777777777766543

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.52  E-value=3.4e-05  Score=31.76  Aligned_cols=24  Identities=42%  Similarity=0.794  Sum_probs=11.6

Q ss_pred             ccccccccccCchHHHHHHhhcCC
Q psy6676          58 KCPVCSRSFNQRSNLKTHLLTHTD   81 (144)
Q Consensus        58 ~C~~C~~~~~~~~~l~~h~~~h~~   81 (144)
                      +|..||+.|..++.|.+|+-.|++
T Consensus         4 vc~ecgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           4 VCAECGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             ECTTTCCEESSHHHHHHHGGGTSC
T ss_pred             hHHHHhHHHHHHHHHHHHhhcccC
Confidence            444455555444445555444443

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.52  E-value=2.6e-05  Score=35.71  Aligned_cols=26  Identities=38%  Similarity=0.782  Sum_probs=19.1

Q ss_pred             CCCCcccCcchhhhcChHHHHHhHhh
Q psy6676          81 DIKPYNCAACGKVFRRNCDLRRHSLT  106 (144)
Q Consensus        81 ~~~~~~C~~C~~~f~~~~~l~~H~~~  106 (144)
                      |.+||.|..|+|.|-+...+.+|...
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH~~~   27 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRHVTS   27 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHhhhh
Confidence            56777787788877777777777643

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.50  E-value=6.7e-05  Score=30.39  Aligned_cols=25  Identities=36%  Similarity=0.584  Sum_probs=19.2

Q ss_pred             cccccccccCChHHHHHHHHHhCCC
Q psy6676          30 KCTECGKGFCQSRTLAVHKILHLEE   54 (144)
Q Consensus        30 ~C~~C~~~f~~~~~l~~h~~~~~~~   54 (144)
                      .|+.|.+.|.++..|..|-+.|+|+
T Consensus         2 qcp~c~k~f~skyylkvhnr~htge   26 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGE   26 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSC
T ss_pred             cCcchHHHHHHhHhhhhccccccCC
Confidence            5778888888888888887777765

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.49  E-value=2.7e-05  Score=31.10  Aligned_cols=24  Identities=33%  Similarity=0.793  Sum_probs=19.3

Q ss_pred             cccCcchhhhcChHHHHHhHhhcc
Q psy6676          85 YNCAACGKVFRRNCDLRRHSLTHN  108 (144)
Q Consensus        85 ~~C~~C~~~f~~~~~l~~H~~~h~  108 (144)
                      |+|..|.+.|...+.|.+|++.|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            578888888888888888888764

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.49  E-value=4.6e-05  Score=32.21  Aligned_cols=26  Identities=27%  Similarity=0.533  Sum_probs=15.5

Q ss_pred             Ccccccc--cccccCChHHHHHHHHHhC
Q psy6676          27 KPFKCTE--CGKGFCQSRTLAVHKILHL   52 (144)
Q Consensus        27 ~~~~C~~--C~~~f~~~~~l~~h~~~~~   52 (144)
                      +||.|..  |+++|.....|..|++.++
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhC
Confidence            4566654  6666666666666665544

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.45  E-value=4.8e-05  Score=31.64  Aligned_cols=24  Identities=29%  Similarity=0.574  Sum_probs=18.7

Q ss_pred             cccccccccccCChHHHHHHHHHh
Q psy6676          28 PFKCTECGKGFCQSRTLAVHKILH   51 (144)
Q Consensus        28 ~~~C~~C~~~f~~~~~l~~h~~~~   51 (144)
                      ||.|..|.+.|.++..|..|+...
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSS
T ss_pred             CcccceeeeeEeeccchhHhhhhh
Confidence            577888888888888888887654

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.44  E-value=4.4e-05  Score=30.45  Aligned_cols=23  Identities=30%  Similarity=0.795  Sum_probs=16.2

Q ss_pred             ccccccccccCChHHHHHHHHHh
Q psy6676          29 FKCTECGKGFCQSRTLAVHKILH   51 (144)
Q Consensus        29 ~~C~~C~~~f~~~~~l~~h~~~~   51 (144)
                      |.|..|.++|..+..|.+|++.|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            46777777777777777776665

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.40  E-value=5e-05  Score=30.77  Aligned_cols=25  Identities=28%  Similarity=0.505  Sum_probs=17.3

Q ss_pred             ccCcchhhhcChHHHHHhHhhccCC
Q psy6676          86 NCAACGKVFRRNCDLRRHSLTHNLG  110 (144)
Q Consensus        86 ~C~~C~~~f~~~~~l~~H~~~h~~~  110 (144)
                      +|+.|.+.|.+...|+.|.+.|+.+
T Consensus         2 qcp~c~k~f~skyylkvhnr~htge   26 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGE   26 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSC
T ss_pred             cCcchHHHHHHhHhhhhccccccCC
Confidence            4677777777777777777776653

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.35  E-value=7.4e-05  Score=31.03  Aligned_cols=26  Identities=31%  Similarity=0.551  Sum_probs=24.3

Q ss_pred             cccCcchhhhcChHHHHHhHhhccCC
Q psy6676          85 YNCAACGKVFRRNCDLRRHSLTHNLG  110 (144)
Q Consensus        85 ~~C~~C~~~f~~~~~l~~H~~~h~~~  110 (144)
                      |.|..||......+.|+.|.+.|+.+
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            78999999999999999999999865

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.29  E-value=2.6e-05  Score=33.27  Aligned_cols=26  Identities=42%  Similarity=0.861  Sum_probs=18.4

Q ss_pred             CCcccCc--chhhhcChHHHHHhH-hhcc
Q psy6676          83 KPYNCAA--CGKVFRRNCDLRRHS-LTHN  108 (144)
Q Consensus        83 ~~~~C~~--C~~~f~~~~~l~~H~-~~h~  108 (144)
                      +||.|..  |.|+|+..+...+|+ |+|.
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CCccccCCChhhhhcchhhhhhhcccccc
Confidence            4677754  778888777777776 6664

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.25  E-value=7.1e-05  Score=31.00  Aligned_cols=25  Identities=40%  Similarity=0.857  Sum_probs=19.9

Q ss_pred             CCcccC--cchhhhcChHHHHHhHhhc
Q psy6676          83 KPYNCA--ACGKVFRRNCDLRRHSLTH  107 (144)
Q Consensus        83 ~~~~C~--~C~~~f~~~~~l~~H~~~h  107 (144)
                      .||.|+  .|++.|...+-|++|.+.|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            467885  4888888888888888776

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.23  E-value=8e-05  Score=31.73  Aligned_cols=27  Identities=37%  Similarity=0.741  Sum_probs=19.8

Q ss_pred             CcccCcchhhhcChHHHHHhHhhccCC
Q psy6676          84 PYNCAACGKVFRRNCDLRRHSLTHNLG  110 (144)
Q Consensus        84 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  110 (144)
                      ||.|.+|++.|.....|-+|+..-|.+
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            577888888888888888887655544

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.19  E-value=0.00017  Score=32.95  Aligned_cols=24  Identities=29%  Similarity=0.621  Sum_probs=15.3

Q ss_pred             CCCcccccccccccCChHHHHHHH
Q psy6676          25 KEKPFKCTECGKGFCQSRTLAVHK   48 (144)
Q Consensus        25 ~~~~~~C~~C~~~f~~~~~l~~h~   48 (144)
                      |.|||.|..|++.|.-...+.+|+
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH~   25 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRHV   25 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHhh
Confidence            556666666666666666666654

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.13  E-value=9.3e-05  Score=30.73  Aligned_cols=23  Identities=30%  Similarity=0.798  Sum_probs=20.6

Q ss_pred             CcccCcchhhhcChHHHHHhHhh
Q psy6676          84 PYNCAACGKVFRRNCDLRRHSLT  106 (144)
Q Consensus        84 ~~~C~~C~~~f~~~~~l~~H~~~  106 (144)
                      ||.|..|...|.+..+|..|++.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            68899999999999999999875

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.07  E-value=0.00016  Score=30.06  Aligned_cols=27  Identities=44%  Similarity=0.887  Sum_probs=21.8

Q ss_pred             Ccccccc--cccccCChHHHHHHHHHhCC
Q psy6676          27 KPFKCTE--CGKGFCQSRTLAVHKILHLE   53 (144)
Q Consensus        27 ~~~~C~~--C~~~f~~~~~l~~h~~~~~~   53 (144)
                      +||+|..  |.+.|.+...|.+|..+|+|
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtg   29 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTG   29 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHT
T ss_pred             CCcCcccccccccchhhhhhhhhhccccC
Confidence            4777865  88888888888888888875

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.06  E-value=0.00027  Score=29.23  Aligned_cols=25  Identities=32%  Similarity=0.768  Sum_probs=16.7

Q ss_pred             Ccccccc--cccccCChHHHHHHHHHh
Q psy6676          27 KPFKCTE--CGKGFCQSRTLAVHKILH   51 (144)
Q Consensus        27 ~~~~C~~--C~~~f~~~~~l~~h~~~~   51 (144)
                      .||.|+.  |++.|...+.|.+|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            4666764  777777777777776654

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.02  E-value=0.0003  Score=27.97  Aligned_cols=23  Identities=39%  Similarity=0.904  Sum_probs=19.5

Q ss_pred             cccccccccccCChHHHHHHHHH
Q psy6676          28 PFKCTECGKGFCQSRTLAVHKIL   50 (144)
Q Consensus        28 ~~~C~~C~~~f~~~~~l~~h~~~   50 (144)
                      ||.|..|...|..+.+|+.|+..
T Consensus         2 pykcsscsqqfmqkkdlqshmik   24 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMIK   24 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHHh
Confidence            78899999999999999888643

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.01  E-value=0.00036  Score=30.37  Aligned_cols=28  Identities=29%  Similarity=0.597  Sum_probs=22.6

Q ss_pred             CcccCcchhhhcChHHHHHhHhhccCCC
Q psy6676          84 PYNCAACGKVFRRNCDLRRHSLTHNLGS  111 (144)
Q Consensus        84 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~  111 (144)
                      .|.|..|+|.|.....+.+|-..+....
T Consensus         4 afvcskcgktftrrntm~rha~nc~g~d   31 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAGPD   31 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCCCC
Confidence            4789999999999998888887766543

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.00  E-value=0.00026  Score=29.30  Aligned_cols=26  Identities=35%  Similarity=0.885  Sum_probs=15.4

Q ss_pred             CCcccCcchhhhcChHHHHHhHhhcc
Q psy6676          83 KPYNCAACGKVFRRNCDLRRHSLTHN  108 (144)
Q Consensus        83 ~~~~C~~C~~~f~~~~~l~~H~~~h~  108 (144)
                      ..|.|..|...|...-.|+.|+-.|+
T Consensus         3 qvftcs~cqe~f~rrmelr~hmvsht   28 (30)
T d2dlqa3           3 QVFTCSVCQETFRRRMELRLHMVSHT   28 (30)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHS
T ss_pred             ceEEeHHHHHHHHHHHhheeeeeccc
Confidence            44566666666666666666665554

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.98  E-value=0.0002  Score=32.23  Aligned_cols=28  Identities=36%  Similarity=0.732  Sum_probs=23.5

Q ss_pred             CCCCccc--CcchhhhcChHHHHHhHhhcc
Q psy6676          81 DIKPYNC--AACGKVFRRNCDLRRHSLTHN  108 (144)
Q Consensus        81 ~~~~~~C--~~C~~~f~~~~~l~~H~~~h~  108 (144)
                      .++||.|  +.|+..|.+...|..|++.|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            4788999  569999999999999988875

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.95  E-value=0.00034  Score=29.12  Aligned_cols=25  Identities=24%  Similarity=0.474  Sum_probs=12.8

Q ss_pred             CcccCcchhhhcChHHHHHhHhhcc
Q psy6676          84 PYNCAACGKVFRRNCDLRRHSLTHN  108 (144)
Q Consensus        84 ~~~C~~C~~~f~~~~~l~~H~~~h~  108 (144)
                      ||.|..|.......++|+.|.++.|
T Consensus         2 py~cqyc~yrsadssnlkthiktkh   26 (30)
T d1klra_           2 TYQCQYCEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred             Cccccccccccccchhhhhhhhccc
Confidence            4555555555555555555555433

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.86  E-value=0.00042  Score=28.29  Aligned_cols=24  Identities=38%  Similarity=0.696  Sum_probs=12.0

Q ss_pred             CcccccccccccCchHHHHHHhhc
Q psy6676          56 PHKCPVCSRSFNQRSNLKTHLLTH   79 (144)
Q Consensus        56 ~~~C~~C~~~~~~~~~l~~h~~~h   79 (144)
                      |++|..|...-...+.|..|+++|
T Consensus         3 p~kck~cdyaaadsssl~kh~rih   26 (28)
T d2dmda1           3 PYKCKTCDYAAADSSSLNKHLRIH   26 (28)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHHS
T ss_pred             CcccccccchhcchhhHhhhhhcc
Confidence            445555555444555555555544

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.83  E-value=0.00039  Score=28.74  Aligned_cols=25  Identities=28%  Similarity=0.638  Sum_probs=13.5

Q ss_pred             ccccccccccCChHHHHHHHHHhCC
Q psy6676          29 FKCTECGKGFCQSRTLAVHKILHLE   53 (144)
Q Consensus        29 ~~C~~C~~~f~~~~~l~~h~~~~~~   53 (144)
                      |.|..|...|...-.|..|+..|+|
T Consensus         5 ftcs~cqe~f~rrmelr~hmvshtg   29 (30)
T d2dlqa3           5 FTCSVCQETFRRRMELRLHMVSHTG   29 (30)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHSS
T ss_pred             EEeHHHHHHHHHHHhheeeeecccC
Confidence            4555555555555555555555543

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.71  E-value=0.00063  Score=27.65  Aligned_cols=21  Identities=38%  Similarity=0.996  Sum_probs=15.2

Q ss_pred             cccccccccccCChHHHHHHH
Q psy6676          28 PFKCTECGKGFCQSRTLAVHK   48 (144)
Q Consensus        28 ~~~C~~C~~~f~~~~~l~~h~   48 (144)
                      ||.|..|++.|..+..|-.|.
T Consensus         1 pf~c~kcgkcyfrkenllehe   21 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHE   21 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHH
Confidence            567777777777777776664

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.70  E-value=0.00069  Score=28.11  Aligned_cols=27  Identities=30%  Similarity=0.469  Sum_probs=19.3

Q ss_pred             CcccccccccccCChHHHHHHHHHhCC
Q psy6676          27 KPFKCTECGKGFCQSRTLAVHKILHLE   53 (144)
Q Consensus        27 ~~~~C~~C~~~f~~~~~l~~h~~~~~~   53 (144)
                      +||+|..|.+-..+.++|..|++..++
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            477788888777777778777765443

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.62  E-value=0.00048  Score=28.61  Aligned_cols=26  Identities=19%  Similarity=0.571  Sum_probs=17.9

Q ss_pred             CCcccCcchhhhcChHHHHHhHhhcc
Q psy6676          83 KPYNCAACGKVFRRNCDLRRHSLTHN  108 (144)
Q Consensus        83 ~~~~C~~C~~~f~~~~~l~~H~~~h~  108 (144)
                      +||+|..|.......++|..|.+..|
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H   26 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFH   26 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHHHHc
Confidence            46777777777777777777776544

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.52  E-value=0.00068  Score=27.74  Aligned_cols=25  Identities=28%  Similarity=0.545  Sum_probs=21.4

Q ss_pred             CcccCcchhhhcChHHHHHhHhhcc
Q psy6676          84 PYNCAACGKVFRRNCDLRRHSLTHN  108 (144)
Q Consensus        84 ~~~C~~C~~~f~~~~~l~~H~~~h~  108 (144)
                      |-+|+.|.++.++.+.|+.|.++|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            4578889999999999999998875

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.49  E-value=0.00087  Score=27.22  Aligned_cols=23  Identities=35%  Similarity=0.868  Sum_probs=16.1

Q ss_pred             CcccCcchhhhcChHHHHHhHhh
Q psy6676          84 PYNCAACGKVFRRNCDLRRHSLT  106 (144)
Q Consensus        84 ~~~C~~C~~~f~~~~~l~~H~~~  106 (144)
                      ||.|..||+-|-...+|..|...
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            56777777777777777777644

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.47  E-value=0.00072  Score=26.91  Aligned_cols=24  Identities=29%  Similarity=0.537  Sum_probs=20.7

Q ss_pred             cccCcchhhhcChHHHHHhHhhcc
Q psy6676          85 YNCAACGKVFRRNCDLRRHSLTHN  108 (144)
Q Consensus        85 ~~C~~C~~~f~~~~~l~~H~~~h~  108 (144)
                      |.|+.|-+.|++..++..|.++-|
T Consensus         2 ypcp~cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCCchhhHHhccccCceEEEEEec
Confidence            789999999999999999988754

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.44  E-value=0.00063  Score=28.89  Aligned_cols=27  Identities=33%  Similarity=0.678  Sum_probs=17.7

Q ss_pred             CCccccc--ccccccCchHHHHHH-hhcCC
Q psy6676          55 SPHKCPV--CSRSFNQRSNLKTHL-LTHTD   81 (144)
Q Consensus        55 ~~~~C~~--C~~~~~~~~~l~~h~-~~h~~   81 (144)
                      +||.|..  |.+.|.+.+....|+ +.|..
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccC
Confidence            3566666  777777777777775 55543

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.41  E-value=0.0016  Score=29.22  Aligned_cols=28  Identities=46%  Similarity=0.869  Sum_probs=21.0

Q ss_pred             CCCcccc--cccccccCChHHHHHHHHHhC
Q psy6676          25 KEKPFKC--TECGKGFCQSRTLAVHKILHL   52 (144)
Q Consensus        25 ~~~~~~C--~~C~~~f~~~~~l~~h~~~~~   52 (144)
                      .++||.|  +-|+.+|.++..|..|...|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            4688888  458888888888888876663

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.37  E-value=0.00068  Score=28.09  Aligned_cols=27  Identities=48%  Similarity=0.805  Sum_probs=19.6

Q ss_pred             CCcccC--cchhhhcChHHHHHhHhhccC
Q psy6676          83 KPYNCA--ACGKVFRRNCDLRRHSLTHNL  109 (144)
Q Consensus        83 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~  109 (144)
                      +||.|.  .|.|.|.+.-.|.+|.-+|+.
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtg   29 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTG   29 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHT
T ss_pred             CCcCcccccccccchhhhhhhhhhccccC
Confidence            456674  488888888888888777754

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.34  E-value=0.0011  Score=26.31  Aligned_cols=21  Identities=38%  Similarity=0.971  Sum_probs=14.1

Q ss_pred             CcccCcchhhhcChHHHHHhH
Q psy6676          84 PYNCAACGKVFRRNCDLRRHS  104 (144)
Q Consensus        84 ~~~C~~C~~~f~~~~~l~~H~  104 (144)
                      ||+|..|...|-....|+.|+
T Consensus         2 pykcsscsqqfmqkkdlqshm   22 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHM   22 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHH
Confidence            566666666666666666665

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.19  E-value=0.0049  Score=25.42  Aligned_cols=27  Identities=22%  Similarity=0.496  Sum_probs=22.3

Q ss_pred             cccccccccccCChHHHHHHHHHhCCC
Q psy6676          28 PFKCTECGKGFCQSRTLAVHKILHLEE   54 (144)
Q Consensus        28 ~~~C~~C~~~f~~~~~l~~h~~~~~~~   54 (144)
                      .|.|..|++..++...+..|+...+..
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvmadhn~   28 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVMANHNS   28 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTCC
T ss_pred             ceechhHHHHHhhccCceEEEeecccC
Confidence            478999999999999999998776543

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.97  E-value=0.0016  Score=30.66  Aligned_cols=27  Identities=37%  Similarity=0.721  Sum_probs=23.8

Q ss_pred             CCcccCcchhhhcChHHHHHhHhhccC
Q psy6676          83 KPYNCAACGKVFRRNCDLRRHSLTHNL  109 (144)
Q Consensus        83 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  109 (144)
                      ..|.|-.|+|.|+....|+.|...|-.
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG~   31 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHGV   31 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHTT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcCc
Confidence            458899999999999999999988765

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=95.83  E-value=0.0032  Score=26.62  Aligned_cols=22  Identities=36%  Similarity=0.769  Sum_probs=11.5

Q ss_pred             CcccccccccccCchHHHHHHh
Q psy6676          56 PHKCPVCSRSFNQRSNLKTHLL   77 (144)
Q Consensus        56 ~~~C~~C~~~~~~~~~l~~h~~   77 (144)
                      ||.|.+|++.|.....+.+|..
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~q   22 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQ   22 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHT
T ss_pred             CcccccccchhhHHHHHHHHHH
Confidence            3455555555555555555543

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.59  E-value=0.0063  Score=24.07  Aligned_cols=22  Identities=23%  Similarity=0.572  Sum_probs=18.6

Q ss_pred             ccccccccccCChHHHHHHHHH
Q psy6676          29 FKCTECGKGFCQSRTLAVHKIL   50 (144)
Q Consensus        29 ~~C~~C~~~f~~~~~l~~h~~~   50 (144)
                      |+|+.|-+.|..+..+..|++.
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            6799999999998888888764

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.57  E-value=0.0022  Score=25.92  Aligned_cols=24  Identities=38%  Similarity=0.996  Sum_probs=19.0

Q ss_pred             ccc--CcchhhhcChHHHHHhHhhcc
Q psy6676          85 YNC--AACGKVFRRNCDLRRHSLTHN  108 (144)
Q Consensus        85 ~~C--~~C~~~f~~~~~l~~H~~~h~  108 (144)
                      |.|  ..|+++|.....|+.|+-+|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            456  359999999999999987764

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.29  E-value=0.0075  Score=26.05  Aligned_cols=26  Identities=35%  Similarity=0.632  Sum_probs=20.0

Q ss_pred             cccccccccccCChHHHHHHHHHhCC
Q psy6676          28 PFKCTECGKGFCQSRTLAVHKILHLE   53 (144)
Q Consensus        28 ~~~C~~C~~~f~~~~~l~~h~~~~~~   53 (144)
                      .|.|..|++.|.....|.+|.-.-.|
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            47788899999888888888655443

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.96  E-value=0.011  Score=27.77  Aligned_cols=25  Identities=32%  Similarity=0.595  Sum_probs=20.3

Q ss_pred             CcccccccccccCChHHHHHHHHHh
Q psy6676          27 KPFKCTECGKGFCQSRTLAVHKILH   51 (144)
Q Consensus        27 ~~~~C~~C~~~f~~~~~l~~h~~~~   51 (144)
                      .-|.|..|++.|.....|..|...|
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQH   29 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQH   29 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHH
T ss_pred             ceeeccccccccCCHHHHhHhHHhc
Confidence            3577888998888888888887766

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.90  E-value=0.0027  Score=32.80  Aligned_cols=25  Identities=24%  Similarity=0.433  Sum_probs=19.9

Q ss_pred             CCCcccCcchhhhcChHHHHHhHhh
Q psy6676          82 IKPYNCAACGKVFRRNCDLRRHSLT  106 (144)
Q Consensus        82 ~~~~~C~~C~~~f~~~~~l~~H~~~  106 (144)
                      ...|.|..|++.|.+...|..|.++
T Consensus        13 ~gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          13 GGLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CCEEecccccCccCCHHHHHHHHcc
Confidence            3458888899999998888888753

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=94.77  E-value=0.0069  Score=26.26  Aligned_cols=30  Identities=23%  Similarity=0.569  Sum_probs=21.7

Q ss_pred             CCCCcccCcchhhhcChHHHHHhHhhccCC
Q psy6676          81 DIKPYNCAACGKVFRRNCDLRRHSLTHNLG  110 (144)
Q Consensus        81 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  110 (144)
                      ++..|+|.+|.+.|+..+++.+|--+-|..
T Consensus         5 g~~~yRC~~C~r~YTHISNFCRHyvtSHk~   34 (37)
T d2drpa1           5 GEHTYRCKVCSRVYTHISNFCRHYVTSHKR   34 (37)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHHHSSS
T ss_pred             cCcEEEeehhhHHHHHHHHHHHHHHhhccc
Confidence            445678888888888888888887655443

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=94.68  E-value=0.0066  Score=25.98  Aligned_cols=23  Identities=26%  Similarity=0.622  Sum_probs=19.7

Q ss_pred             CCcccCcchhhhcChHHHHHhHh
Q psy6676          83 KPYNCAACGKVFRRNCDLRRHSL  105 (144)
Q Consensus        83 ~~~~C~~C~~~f~~~~~l~~H~~  105 (144)
                      ..|.|..||-.|++.+.|..|+.
T Consensus         7 arf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           7 ARFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCCBCTTTCCBCSCHHHHHHHTT
T ss_pred             cceeccccceeecChhHHHhhhh
Confidence            34889999999999999998875

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.29  E-value=0.012  Score=23.79  Aligned_cols=25  Identities=28%  Similarity=0.636  Sum_probs=18.9

Q ss_pred             CcccCcchhhhcChHHHHHhHhhcc
Q psy6676          84 PYNCAACGKVFRRNCDLRRHSLTHN  108 (144)
Q Consensus        84 ~~~C~~C~~~f~~~~~l~~H~~~h~  108 (144)
                      .|.|+.|+-.....+.|..|++..|
T Consensus         2 k~qcphc~tiiarksdlrvhlrnlh   26 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRKQH   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHTS
T ss_pred             CccCCcchhheeehhhhhHHhhhcc
Confidence            3678888888888888888877543

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.71  E-value=0.022  Score=23.18  Aligned_cols=20  Identities=45%  Similarity=0.863  Sum_probs=16.5

Q ss_pred             cchhhhcChHHHHHhHhhcc
Q psy6676          89 ACGKVFRRNCDLRRHSLTHN  108 (144)
Q Consensus        89 ~C~~~f~~~~~l~~H~~~h~  108 (144)
                      .|+|.|...+.+++|+.+|-
T Consensus         8 gC~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           8 GCTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             TCCCEESSHHHHHHHHGGGS
T ss_pred             cHHHHhhchHHHHHHhhccC
Confidence            48888999888888888774

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=93.58  E-value=0.033  Score=25.99  Aligned_cols=27  Identities=33%  Similarity=0.609  Sum_probs=18.2

Q ss_pred             CCCcccCcchhhhcChHHHHHhHhhcc
Q psy6676          82 IKPYNCAACGKVFRRNCDLRRHSLTHN  108 (144)
Q Consensus        82 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  108 (144)
                      +.|..|+.|+.......+|++|+..-|
T Consensus        22 ~qpatcpic~avirqsrnlrrhlel~h   48 (54)
T d1yuja_          22 EQPATCPICYAVIRQSRNLRRHLELRH   48 (54)
T ss_dssp             SCCEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             cCCCCCchHHHHHHHHHHHHHHHHHHh
Confidence            456677777777777777777766544

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.41  E-value=0.037  Score=22.67  Aligned_cols=25  Identities=24%  Similarity=0.687  Sum_probs=18.4

Q ss_pred             CcccCcchhhhcChHHHHHhHhhcc
Q psy6676          84 PYNCAACGKVFRRNCDLRRHSLTHN  108 (144)
Q Consensus        84 ~~~C~~C~~~f~~~~~l~~H~~~h~  108 (144)
                      .|.|..|||+..+...++-|.-.-|
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvmadh   26 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVMANH   26 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHT
T ss_pred             ceechhHHHHHhhccCceEEEeecc
Confidence            3678888888888888887775533

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=92.58  E-value=0.028  Score=25.03  Aligned_cols=10  Identities=30%  Similarity=0.481  Sum_probs=4.5

Q ss_pred             cccccccccc
Q psy6676          28 PFKCTECGKG   37 (144)
Q Consensus        28 ~~~C~~C~~~   37 (144)
                      -|.|+.||..
T Consensus         5 ~~vC~vCGyi   14 (36)
T d1yuza2           5 FHLCPICGYI   14 (36)
T ss_dssp             EEECSSSCCE
T ss_pred             EEECCCCCCE
Confidence            3444444433

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.99  E-value=0.018  Score=29.51  Aligned_cols=26  Identities=23%  Similarity=0.377  Sum_probs=20.6

Q ss_pred             CCCcccccccccccCChHHHHHHHHH
Q psy6676          25 KEKPFKCTECGKGFCQSRTLAVHKIL   50 (144)
Q Consensus        25 ~~~~~~C~~C~~~f~~~~~l~~h~~~   50 (144)
                      |...|-|..|++.|.+...|..|.++
T Consensus        12 G~gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          12 GGGLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CCCEEecccccCccCCHHHHHHHHcc
Confidence            45668899999999998888888543

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=91.70  E-value=0.11  Score=24.16  Aligned_cols=27  Identities=37%  Similarity=0.463  Sum_probs=16.7

Q ss_pred             CCcccccccccccCChHHHHHHHHHhC
Q psy6676          26 EKPFKCTECGKGFCQSRTLAVHKILHL   52 (144)
Q Consensus        26 ~~~~~C~~C~~~f~~~~~l~~h~~~~~   52 (144)
                      +.|-.|+.|+....+..+|.+|....+
T Consensus        22 ~qpatcpic~avirqsrnlrrhlel~h   48 (54)
T d1yuja_          22 EQPATCPICYAVIRQSRNLRRHLELRH   48 (54)
T ss_dssp             SCCEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             cCCCCCchHHHHHHHHHHHHHHHHHHh
Confidence            455666777766666666666654433

>d1wjpa3 g.37.1.1 (A:67-107) Zinc finger protein 295, ZNF295 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 295, ZNF295
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.43  E-value=0.14  Score=22.23  Aligned_cols=30  Identities=17%  Similarity=0.445  Sum_probs=21.6

Q ss_pred             CcccCcchhhhcChHHHHHhHhhccCCCCC
Q psy6676          84 PYNCAACGKVFRRNCDLRRHSLTHNLGSAT  113 (144)
Q Consensus        84 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  113 (144)
                      ...|..|-+.|.+.-...+|+---|..+..
T Consensus         3 kltclecmrtfkssfsiwrhqvevhnqn~m   32 (41)
T d1wjpa3           3 KLTCLECMRTFKSSFSIWRHQVEVHNQNNM   32 (41)
T ss_dssp             GGEEGGGTEECSSHHHHHHHHHHTSCCCCC
T ss_pred             cccHHHHHHHHHHHHHHHHhhheecccccc
Confidence            356888888888888888888655544443

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.23  E-value=0.039  Score=23.94  Aligned_cols=18  Identities=28%  Similarity=0.372  Sum_probs=10.6

Q ss_pred             cccCchHHHHHHhhcCCC
Q psy6676          65 SFNQRSNLKTHLLTHTDI   82 (144)
Q Consensus        65 ~~~~~~~l~~h~~~h~~~   82 (144)
                      +|.....|..|++.|++|
T Consensus        16 pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          16 PFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CCSSHHHHHHHTHHHHCC
T ss_pred             cchhHHHHHHHHhhcCCC
Confidence            455556666666666553

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=91.04  E-value=0.044  Score=24.53  Aligned_cols=9  Identities=33%  Similarity=1.091  Sum_probs=4.5

Q ss_pred             ccccccccc
Q psy6676          57 HKCPVCSRS   65 (144)
Q Consensus        57 ~~C~~C~~~   65 (144)
                      |+|.+||..
T Consensus         6 ~~C~vCG~i   14 (37)
T d1nnqa2           6 YICPICGYT   14 (37)
T ss_dssp             EECTTTCCE
T ss_pred             EECCCCCCE
Confidence            455555544

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.51  E-value=0.06  Score=27.04  Aligned_cols=39  Identities=18%  Similarity=0.543  Sum_probs=24.3

Q ss_pred             CCCCcccccccccccCChHHHHHHHHHhCCCCCccccccccc
Q psy6676          24 SKEKPFKCTECGKGFCQSRTLAVHKILHLEESPHKCPVCSRS   65 (144)
Q Consensus        24 ~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~   65 (144)
                      .....|.|+.|++.|.....++   ........|.|..|+..
T Consensus        10 ~~~~~y~Cp~C~~~ys~Lda~~---L~d~~~~~F~C~~C~~e   48 (62)
T d1vd4a_          10 TNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTE   48 (62)
T ss_dssp             CSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCB
T ss_pred             ccCCceECCCCCCCcchhhHHH---hcCcCCCeEEecCCCCE
Confidence            3456788888888876544333   23333455888888643

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.41  E-value=0.072  Score=21.70  Aligned_cols=21  Identities=24%  Similarity=0.577  Sum_probs=16.3

Q ss_pred             CcchhhhcChHHHHHhHhhcc
Q psy6676          88 AACGKVFRRNCDLRRHSLTHN  108 (144)
Q Consensus        88 ~~C~~~f~~~~~l~~H~~~h~  108 (144)
                      +.||+.|++...|..|.+-.|
T Consensus         6 ~gc~kifsnrqylnhh~kyqh   26 (30)
T d2dlka1           6 PGCGRIFSNRQYLNHHKKYQH   26 (30)
T ss_dssp             TTTCCEESSHHHHHHHHHHGG
T ss_pred             CCchhhhccHHHHHhHHHHHH
Confidence            458899999888888877544

>d1m36a_ g.37.1.2 (A:) Monocytic leukemia zinc finger protein Moz {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: Monocytic leukemia zinc finger protein Moz
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.03  E-value=0.14  Score=22.04  Aligned_cols=27  Identities=26%  Similarity=0.375  Sum_probs=20.8

Q ss_pred             CCCcccCcchhhhcChHHHHHhHhhcc
Q psy6676          82 IKPYNCAACGKVFRRNCDLRRHSLTHN  108 (144)
Q Consensus        82 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  108 (144)
                      .+.|.|+.|-|-..+...+++|+..+.
T Consensus         5 pkLyiCEfCLKYmks~~~l~RH~~KC~   31 (33)
T d1m36a_           5 PKLYLCEFCLKYMKSRTILQQHMKKCG   31 (33)
T ss_dssp             CCCEECSSSCCEESCHHHHHHHHHHTT
T ss_pred             CeeeeehhhhhhhCCHHHHHHHHHhCC
Confidence            356788888888888888888887654

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.16  E-value=0.34  Score=24.14  Aligned_cols=31  Identities=16%  Similarity=0.418  Sum_probs=25.7

Q ss_pred             ccCCCCcccccccccccCChHHHHHHHHHhC
Q psy6676          22 IHSKEKPFKCTECGKGFCQSRTLAVHKILHL   52 (144)
Q Consensus        22 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~~   52 (144)
                      +..+..-|.|..|.-.|.....|..|...|.
T Consensus        12 ~~~~s~~yQC~HCd~K~~s~~el~~hl~~hn   42 (75)
T d1x6fa1          12 PRLQNSTYQCKHCDSKLQSTAELTSHLNIHN   42 (75)
T ss_dssp             SCCCCSCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             cccCCceeeechhHHHHhhHHHHHHHHHhcc
Confidence            3455677999999999999999999988774

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.80  E-value=0.2  Score=25.04  Aligned_cols=27  Identities=26%  Similarity=0.580  Sum_probs=23.2

Q ss_pred             CCCcccCcchhhhcChHHHHHhHhhcc
Q psy6676          82 IKPYNCAACGKVFRRNCDLRRHSLTHN  108 (144)
Q Consensus        82 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  108 (144)
                      ...|.|..|...|.+...|..|+..|.
T Consensus        16 s~~yQC~HCd~K~~s~~el~~hl~~hn   42 (75)
T d1x6fa1          16 NSTYQCKHCDSKLQSTAELTSHLNIHN   42 (75)
T ss_dssp             CSCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CceeeechhHHHHhhHHHHHHHHHhcc
Confidence            356999999999999999999987765

>d2ak3a2 g.41.2.1 (A:125-161) Microbial and mitochondrial ADK, insert "zinc finger" domain {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Microbial and mitochondrial ADK, insert "zinc finger" domain
family: Microbial and mitochondrial ADK, insert "zinc finger" domain
domain: Microbial and mitochondrial ADK, insert "zinc finger" domain
species: Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]

Probab=82.26  E-value=0.22  Score=22.09  Aligned_cols=9  Identities=11%  Similarity=0.265  Sum_probs=4.5

Q ss_pred             ccccccccc
Q psy6676          30 KCTECGKGF   38 (144)
Q Consensus        30 ~C~~C~~~f   38 (144)
                      .|+.||..|
T Consensus         4 vc~~cG~~Y   12 (37)
T d2ak3a2           4 IHPGSGRVY   12 (37)
T ss_dssp             EETTTTEEE
T ss_pred             eeCCcCChh
Confidence            455555554

>d2czra1 c.52.4.1 (A:1-218) TBP-interacting protein {Thermococcus kodakaraensis [TaxId: 311400]}

class: Alpha and beta proteins (a/b)
fold: Restriction endonuclease-like
superfamily: TBP-interacting protein-like
family: TBP-interacting protein-like
domain: TBP-interacting protein
species: Thermococcus kodakaraensis [TaxId: 311400]

Probab=82.01  E-value=0.19  Score=30.36  Aligned_cols=38  Identities=26%  Similarity=0.509  Sum_probs=27.9

Q ss_pred             hHHHHHHhhcCCC-------CCcccCcchhhhcChHHHHHhHhhcc
Q psy6676          70 SNLKTHLLTHTDI-------KPYNCAACGKVFRRNCDLRRHSLTHN  108 (144)
Q Consensus        70 ~~l~~h~~~h~~~-------~~~~C~~C~~~f~~~~~l~~H~~~h~  108 (144)
                      ..|..|++.....       +-|+|..||+ |..-.+|..|++.|-
T Consensus       125 grlieHiK~~m~~GqDyvFWQFYKCe~CgK-YvDie~~~~H~k~HG  169 (218)
T d2czra1         125 AALVNHIKNNALAGQDYIFWQFYKCEECGK-YVDIENLEAHLREHG  169 (218)
T ss_dssp             HHHHHHHHTTCCBTTTEEEEEEEECTTTCC-EEEGGGHHHHHHTTT
T ss_pred             HHHHHHHHhccccCcceEEEEEeehhhcCc-eecHHHHHHHHHHcC
Confidence            5677787743321       2379999998 677889999999875