Psyllid ID: psy6796

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120---
Protein Sequence
MVGPIHGTVEFLLWDEVWQGSMGLNCPGGLSSMGSKLAYSMGFALNCPVVEYVTPEKYAHWEKVVEYVTPEKYAHWEKVGNSMGFLYTASGPLVRSSYKAGEFFIGSVLRNRKAAAEAKTENA
Secondary Structure (PSIPRED)
cccccccHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHccccEEEEcccccccccccccccccHHHHHHHHHHHHHccccEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccccccEHEEEEHHHHHcccccccccccccccHHHHHHHHHHHccccEEEEccccccccccEEEEEccHHHHHHHHHHHHHcccEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHcccc
Coil and Loop (DISEMBL)
mvgpihgtVEFLLWDEVwqgsmglncpgglssmgskLAYSMGFalncpvveyvtpekyaHWEKVVEYVTPEKYAHWEKVGNSMgflytasgplvrssykagefFIGSVLRNRKAAAEAKTENA
Flexible Loop (DISEMBL)
MVGPIHGTVEFLLWDEVWQGSMGLNCPGGLSSMGSKLAYSMGFALNCPVVEYVTPEKYAHWEKVVEYVTPEKYAHWEKVGNSMGFLYTASGPLVRSSYKAGEFFIGSVLRNRKAAAEAKTENA
Low Complexity Region (SEG)
MVGPIHGTVEFLLWDEVWQGSMGLNCPGGLSSMGSKLAYSMGFALNCPVVEYVTPEKYAHWEKVVEYVTPEKYAHWEKVGNSMGFLYTASGPLVRSSYKAGEFFIGSVLRNRKAAAEAKTENA
Disordered region (IsUnstruct)
****IHGTVEFLLWDEVWQGSMGLNCPGGLSSMGSKLAYSMGFALNCPVVEYVTPEKYAHWEKVVEYVTPEKYAHWEKVGNSMGFLYTASGPLVRSSYKAGEFFIGSVLR*************
Disordered Region (DISOPRED)
*****HGTVEFLLWDEVWQGSMGLNCPGGLSSMGSKLAYSMGFALNCPVVEYVTPEKYAHWEKVVEYVTPEKYAHWEKVGNSMGFLYTASGPLVRSSYKAGEFFI******************
Disordered Region (DISEMBL)
MVGPIHGTVEFLLWDEVWQGSMGLNCPGGLSSMGSKLAYSMGFALNCPVVEYVTPEKYAHWEKVVEYVTPEKYAHWEKVGNSMGFLYTASGPLVRSSYKAGEFFIGSVLR*************
Disordered Region (DISPRO)
*VGPIHGTVEFLLWDEVWQGSMGLNCPGGLSSMGSKLAYSMGFALNCPVVEYVTPEKYAHWEKVVEYVTPEKYAHWEKVGNSMGFLYTASGPLVRSSYKAGEFFIGSVLRNRKAA********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVGPIHGTVEFLLWDEVWQGSMGLNCPGGLSSMGSKLAYSMGFALNCPVVEYVTPEKYAHWEKVVEYVTPEKYAHWEKVGNSMGFLYTASGPLVRSSYKAGEFFIGSVLRNRKAAAEAKTENA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	123	2.2.26 [Sep-21-2011]
Q16W22	393	Lipoyl synthase, mitochon	N/A	N/A	0.577	0.180	0.643	2e-21
Q2LYK1	374	Lipoyl synthase, mitochon	yes	N/A	0.422	0.139	0.807	2e-20
B4MXR6	372	Lipoyl synthase, mitochon	N/A	N/A	0.536	0.177	0.676	2e-20
B3NIL9	379	Lipoyl synthase, mitochon	N/A	N/A	0.455	0.147	0.75	6e-20
B4IAA7	377	Lipoyl synthase, mitochon	N/A	N/A	0.455	0.148	0.75	6e-20
Q7JQW6	377	Lipoyl synthase, mitochon	yes	N/A	0.414	0.135	0.803	7e-20
B4PF83	379	Lipoyl synthase 2, mitoch	N/A	N/A	0.455	0.147	0.75	8e-20
B4IUG3	379	Lipoyl synthase 1, mitoch	N/A	N/A	0.455	0.147	0.75	8e-20
B3M996	376	Lipoyl synthase, mitochon	N/A	N/A	0.414	0.135	0.803	1e-19
B0WAU6	380	Lipoyl synthase, mitochon	N/A	N/A	0.487	0.157	0.693	2e-19

>sp|Q16W22|LIAS_AEDAE Lipoyl synthase, mitochondrial OS=Aedes aegypti GN=AAEL009368 PE=3 SV=1

 Score =  101 bits (251), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 47/73 (64%), Positives = 55/73 (75%), Gaps = 2/73 (2%)

Query: 51  EYVTPEKYAHWEKVVEYVTPEKYAHWEKVGNSMGFLYTASGPLVRSSYKAGEFFIGSVLR 110
           +Y+ P K     KV+EYVTPEK+ HWE  GN +GFLYTASGPLVRSSYKAGEFFI S+L+
Sbjct: 313 QYMQPTK--RHLKVIEYVTPEKFKHWETRGNELGFLYTASGPLVRSSYKAGEFFITSILK 370

Query: 111 NRKAAAEAKTENA 123
           NR   AE + E A
Sbjct: 371 NRAEEAERRKEAA 383

Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.
Aedes aegypti (taxid: 7159)
EC: 2EC: .EC: 8EC: .EC: 1EC: .EC: 8

>sp|Q2LYK1|LIAS_DROPS Lipoyl synthase, mitochondrial OS=Drosophila pseudoobscura pseudoobscura GN=Las PE=3 SV=1

 Score = 97.8 bits (242), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 42/52 (80%), Positives = 47/52 (90%)

Query: 63  KVVEYVTPEKYAHWEKVGNSMGFLYTASGPLVRSSYKAGEFFIGSVLRNRKA 114
           KV+EYVTPEK+ HWE+ GN +GFLYTASGPLVRSSYKAGEFFI S+L NRKA
Sbjct: 313 KVIEYVTPEKFKHWEERGNDLGFLYTASGPLVRSSYKAGEFFISSILANRKA 364

Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.

Drosophila pseudoobscura pseudoobscura (taxid: 46245)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 8

>sp|B4MXR6|LIAS_DROWI Lipoyl synthase, mitochondrial OS=Drosophila willistoni GN=Las PE=3 SV=1

 Score = 97.8 bits (242), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 46/68 (67%), Positives = 54/68 (79%), Gaps = 2/68 (2%)

Query: 51  EYVTPEKYAHWEKVVEYVTPEKYAHWEKVGNSMGFLYTASGPLVRSSYKAGEFFIGSVLR 110
           +Y+ P K  H  KV+EYVTPEK+ HWE+ GN +GFLYTASGPLVRSSYKAGEFFI S+L 
Sbjct: 305 QYMQPTK-KHL-KVIEYVTPEKFKHWEERGNQLGFLYTASGPLVRSSYKAGEFFITSILA 362

Query: 111 NRKAAAEA 118
           NRK   +A
Sbjct: 363 NRKKQNDA 370

Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.

Drosophila willistoni (taxid: 7260)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 8

>sp|B3NIL9|LIAS_DROER Lipoyl synthase, mitochondrial OS=Drosophila erecta GN=Las PE=3 SV=1

 Score = 95.9 bits (237), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 42/56 (75%), Positives = 48/56 (85%)

Query: 63  KVVEYVTPEKYAHWEKVGNSMGFLYTASGPLVRSSYKAGEFFIGSVLRNRKAAAEA 118
           KV+EYVTPEK+ HWE+ GN++GFLYTASGPLVRSSYKAGEFFI S+L NRK    A
Sbjct: 318 KVIEYVTPEKFKHWEERGNALGFLYTASGPLVRSSYKAGEFFITSILENRKKRQNA 373

Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.

Drosophila erecta (taxid: 7220)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 8

>sp|B4IAA7|LIAS_DROSE Lipoyl synthase, mitochondrial OS=Drosophila sechellia GN=Las PE=3 SV=1

 Score = 95.9 bits (237), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 42/56 (75%), Positives = 47/56 (83%)

Query: 63  KVVEYVTPEKYAHWEKVGNSMGFLYTASGPLVRSSYKAGEFFIGSVLRNRKAAAEA 118
           KV+EYVTPEK+ HWE+ GN +GFLYTASGPLVRSSYKAGEFFI S+L NRK    A
Sbjct: 315 KVIEYVTPEKFKHWEERGNELGFLYTASGPLVRSSYKAGEFFITSILENRKKRQNA 370

Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.

Drosophila sechellia (taxid: 7238)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 8

>sp|Q7JQW6|LIAS_DROME Lipoyl synthase, mitochondrial OS=Drosophila melanogaster GN=Las PE=1 SV=2

 Score = 95.9 bits (237), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 41/51 (80%), Positives = 46/51 (90%)

Query: 63  KVVEYVTPEKYAHWEKVGNSMGFLYTASGPLVRSSYKAGEFFIGSVLRNRK 113
           KV+EYVTPEK+ HWE+ GN +GFLYTASGPLVRSSYKAGEFFI S+L NRK
Sbjct: 315 KVIEYVTPEKFKHWEERGNELGFLYTASGPLVRSSYKAGEFFITSILENRK 365

Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.

Drosophila melanogaster (taxid: 7227)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 8

>sp|B4PF83|LIAS2_DROYA Lipoyl synthase 2, mitochondrial OS=Drosophila yakuba GN=Las2 PE=3 SV=1

 Score = 95.5 bits (236), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 42/56 (75%), Positives = 47/56 (83%)

Query: 63  KVVEYVTPEKYAHWEKVGNSMGFLYTASGPLVRSSYKAGEFFIGSVLRNRKAAAEA 118
           KV+EYVTPEK+ HWE+ GN +GFLYTASGPLVRSSYKAGEFFI S+L NRK    A
Sbjct: 318 KVIEYVTPEKFKHWEERGNELGFLYTASGPLVRSSYKAGEFFITSILENRKKRQNA 373

Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.

Drosophila yakuba (taxid: 7245)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 8

>sp|B4IUG3|LIAS1_DROYA Lipoyl synthase 1, mitochondrial OS=Drosophila yakuba GN=Las1 PE=3 SV=1

 Score = 95.5 bits (236), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 42/56 (75%), Positives = 47/56 (83%)

Query: 63  KVVEYVTPEKYAHWEKVGNSMGFLYTASGPLVRSSYKAGEFFIGSVLRNRKAAAEA 118
           KV+EYVTPEK+ HWE+ GN +GFLYTASGPLVRSSYKAGEFFI S+L NRK    A
Sbjct: 318 KVIEYVTPEKFKHWEERGNELGFLYTASGPLVRSSYKAGEFFITSILENRKKRQNA 373

Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.

Drosophila yakuba (taxid: 7245)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 8

>sp|B3M996|LIAS_DROAN Lipoyl synthase, mitochondrial OS=Drosophila ananassae GN=Las PE=3 SV=1

 Score = 94.7 bits (234), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 41/51 (80%), Positives = 45/51 (88%)

Query: 63  KVVEYVTPEKYAHWEKVGNSMGFLYTASGPLVRSSYKAGEFFIGSVLRNRK 113
           KV+EYVTPEK+ HWE  GN +GFLYTASGPLVRSSYKAGEFFI S+L NRK
Sbjct: 315 KVIEYVTPEKFKHWEDRGNQLGFLYTASGPLVRSSYKAGEFFITSILENRK 365

Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.

Drosophila ananassae (taxid: 7217)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 8

>sp|B0WAU6|LIAS_CULQU Lipoyl synthase, mitochondrial OS=Culex quinquefasciatus GN=CPIJ004250 PE=3 SV=1

 Score = 94.7 bits (234), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/62 (69%), Positives = 50/62 (80%), Gaps = 2/62 (3%)

Query: 51  EYVTPEKYAHWEKVVEYVTPEKYAHWEKVGNSMGFLYTASGPLVRSSYKAGEFFIGSVLR 110
           +Y+ P K     KV+EYVTPEK+ HWE  GN +GFLYTASGPLVRSSYKAGEFFI S+L+
Sbjct: 306 QYMQPTK--RHLKVIEYVTPEKFKHWETRGNELGFLYTASGPLVRSSYKAGEFFITSILK 363

Query: 111 NR 112
           NR
Sbjct: 364 NR 365

Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.

Culex quinquefasciatus (taxid: 7176)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 8

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	123
193669175	375	PREDICTED: lipoyl synthase 1, mitochondr	0.569	0.186	0.652	2e-20
157123026	393	lipoic acid synthetase [Aedes aegypti] g	0.577	0.180	0.643	7e-20
158293213	400	AGAP010568-PA [Anopheles gambiae str. PE	0.536	0.165	0.676	2e-19
125980194	374	GA18753 [Drosophila pseudoobscura pseudo	0.422	0.139	0.807	8e-19
195435764	372	GK17689 [Drosophila willistoni] gi|30675	0.536	0.177	0.676	8e-19
242011307	495	lipoic acid synthetase, putative [Pedicu	0.495	0.123	0.698	1e-18
91081119	372	PREDICTED: similar to Lipoic acid syntha	0.520	0.172	0.712	2e-18
194874899	379	GG13311 [Drosophila erecta] gi|306755878	0.455	0.147	0.75	3e-18
195348257	377	GM22215 [Drosophila sechellia] gi|306755	0.455	0.148	0.75	3e-18
221513272	377	lipoic acid synthase [Drosophila melanog	0.414	0.135	0.803	3e-18

>gi|193669175|ref|XP_001945618.1| PREDICTED: lipoyl synthase 1, mitochondrial-like [Acyrthosiphon pisum]

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 47/72 (65%), Positives = 57/72 (79%), Gaps = 2/72 (2%)

Query: 51  EYVTPEKYAHWEKVVEYVTPEKYAHWEKVGNSMGFLYTASGPLVRSSYKAGEFFIGSVLR 110
           +Y+ P K     KVVEYVTPEK+ HW++VG+ MGFLYTASGPLVRSSYKAGEFFIG+VL+
Sbjct: 304 QYMQPTK--RHLKVVEYVTPEKFKHWQEVGDKMGFLYTASGPLVRSSYKAGEFFIGNVLK 361

Query: 111 NRKAAAEAKTEN 122
            RK   E+K  +
Sbjct: 362 KRKEVQESKISD 373

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157123026|ref|XP_001659989.1| lipoic acid synthetase [Aedes aegypti] gi|122094084|sp|Q16W22.1|LIAS_AEDAE RecName: Full=Lipoyl synthase, mitochondrial; AltName: Full=Lipoate synthase; Short=LS; Short=Lip-syn; AltName: Full=Lipoic acid synthase; Flags: Precursor gi|108874549|gb|EAT38774.1| AAEL009368-PA [Aedes aegypti]

 Score =  101 bits (251), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 47/73 (64%), Positives = 55/73 (75%), Gaps = 2/73 (2%)

Query: 51  EYVTPEKYAHWEKVVEYVTPEKYAHWEKVGNSMGFLYTASGPLVRSSYKAGEFFIGSVLR 110
           +Y+ P K     KV+EYVTPEK+ HWE  GN +GFLYTASGPLVRSSYKAGEFFI S+L+
Sbjct: 313 QYMQPTK--RHLKVIEYVTPEKFKHWETRGNELGFLYTASGPLVRSSYKAGEFFITSILK 370

Query: 111 NRKAAAEAKTENA 123
           NR   AE + E A
Sbjct: 371 NRAEEAERRKEAA 383

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158293213|ref|XP_314540.4| AGAP010568-PA [Anopheles gambiae str. PEST] gi|157016850|gb|EAA09970.4| AGAP010568-PA [Anopheles gambiae str. PEST]

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 46/68 (67%), Positives = 53/68 (77%), Gaps = 2/68 (2%)

Query: 51  EYVTPEKYAHWEKVVEYVTPEKYAHWEKVGNSMGFLYTASGPLVRSSYKAGEFFIGSVLR 110
           +Y+ P K     KV+EYVTPEK+ HWE+ GN +GFLYTASGPLVRSSYKAGEFFI S+LR
Sbjct: 317 QYMQPTK--RHLKVIEYVTPEKFKHWEERGNELGFLYTASGPLVRSSYKAGEFFITSILR 374

Query: 111 NRKAAAEA 118
           NR    EA
Sbjct: 375 NRAKEEEA 382

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|125980194|ref|XP_001354122.1| GA18753 [Drosophila pseudoobscura pseudoobscura] gi|122000230|sp|Q2LYK1.1|LIAS_DROPS RecName: Full=Lipoyl synthase, mitochondrial; AltName: Full=Lipoate synthase; Short=LS; Short=Lip-syn; AltName: Full=Lipoic acid synthase; Flags: Precursor gi|54641110|gb|EAL29861.1| GA18753 [Drosophila pseudoobscura pseudoobscura]

 Score = 97.8 bits (242), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 42/52 (80%), Positives = 47/52 (90%)

Query: 63  KVVEYVTPEKYAHWEKVGNSMGFLYTASGPLVRSSYKAGEFFIGSVLRNRKA 114
           KV+EYVTPEK+ HWE+ GN +GFLYTASGPLVRSSYKAGEFFI S+L NRKA
Sbjct: 313 KVIEYVTPEKFKHWEERGNDLGFLYTASGPLVRSSYKAGEFFISSILANRKA 364

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195435764|ref|XP_002065849.1| GK17689 [Drosophila willistoni] gi|306755882|sp|B4MXR6.1|LIAS_DROWI RecName: Full=Lipoyl synthase, mitochondrial; AltName: Full=Lipoate synthase; Short=LS; Short=Lip-syn; AltName: Full=Lipoic acid synthase; Flags: Precursor gi|194161934|gb|EDW76835.1| GK17689 [Drosophila willistoni]

 Score = 97.8 bits (242), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 46/68 (67%), Positives = 54/68 (79%), Gaps = 2/68 (2%)

Query: 51  EYVTPEKYAHWEKVVEYVTPEKYAHWEKVGNSMGFLYTASGPLVRSSYKAGEFFIGSVLR 110
           +Y+ P K  H  KV+EYVTPEK+ HWE+ GN +GFLYTASGPLVRSSYKAGEFFI S+L 
Sbjct: 305 QYMQPTK-KHL-KVIEYVTPEKFKHWEERGNQLGFLYTASGPLVRSSYKAGEFFITSILA 362

Query: 111 NRKAAAEA 118
           NRK   +A
Sbjct: 363 NRKKQNDA 370

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242011307|ref|XP_002426395.1| lipoic acid synthetase, putative [Pediculus humanus corporis] gi|212510482|gb|EEB13657.1| lipoic acid synthetase, putative [Pediculus humanus corporis]

 Score = 97.4 bits (241), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 44/63 (69%), Positives = 53/63 (84%), Gaps = 2/63 (3%)

Query: 51  EYVTPEKYAHWEKVVEYVTPEKYAHWEKVGNSMGFLYTASGPLVRSSYKAGEFFIGSVLR 110
           +Y+ P K  H + VVEYVTPEK+ HWE+VGN +GFLYTASGPLVRSSYKAGEFFI S+++
Sbjct: 432 QYMQPTK-RHLQ-VVEYVTPEKFKHWEQVGNDLGFLYTASGPLVRSSYKAGEFFISSIIK 489

Query: 111 NRK 113
            RK
Sbjct: 490 QRK 492

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91081119|ref|XP_975527.1| PREDICTED: similar to Lipoic acid synthase CG5231-PA [Tribolium castaneum] gi|270006027|gb|EFA02475.1| hypothetical protein TcasGA2_TC008166 [Tribolium castaneum]

 Score = 96.7 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 47/66 (71%), Positives = 52/66 (78%), Gaps = 2/66 (3%)

Query: 51  EYVTPEKYAHWEKVVEYVTPEKYAHWEKVGNSMGFLYTASGPLVRSSYKAGEFFIGSVLR 110
           +Y+ P K  H   VVEYVTPEKY +WEKVGN M FLY ASGPLVRSSYKAGEFFI S+L+
Sbjct: 308 QYMQPTK-KHL-LVVEYVTPEKYQYWEKVGNEMKFLYVASGPLVRSSYKAGEFFIASILK 365

Query: 111 NRKAAA 116
           NRK  A
Sbjct: 366 NRKTNA 371

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194874899|ref|XP_001973489.1| GG13311 [Drosophila erecta] gi|306755878|sp|B3NIL9.1|LIAS_DROER RecName: Full=Lipoyl synthase, mitochondrial; AltName: Full=Lipoate synthase; Short=LS; Short=Lip-syn; AltName: Full=Lipoic acid synthase; Flags: Precursor gi|190655272|gb|EDV52515.1| GG13311 [Drosophila erecta]

 Score = 95.9 bits (237), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 42/56 (75%), Positives = 48/56 (85%)

Query: 63  KVVEYVTPEKYAHWEKVGNSMGFLYTASGPLVRSSYKAGEFFIGSVLRNRKAAAEA 118
           KV+EYVTPEK+ HWE+ GN++GFLYTASGPLVRSSYKAGEFFI S+L NRK    A
Sbjct: 318 KVIEYVTPEKFKHWEERGNALGFLYTASGPLVRSSYKAGEFFITSILENRKKRQNA 373

Source: Drosophila erecta

Species: Drosophila erecta

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195348257|ref|XP_002040667.1| GM22215 [Drosophila sechellia] gi|306755881|sp|B4IAA7.1|LIAS_DROSE RecName: Full=Lipoyl synthase, mitochondrial; AltName: Full=Lipoate synthase; Short=LS; Short=Lip-syn; AltName: Full=Lipoic acid synthase; Flags: Precursor gi|194122177|gb|EDW44220.1| GM22215 [Drosophila sechellia]

 Score = 95.9 bits (237), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 42/56 (75%), Positives = 47/56 (83%)

Query: 63  KVVEYVTPEKYAHWEKVGNSMGFLYTASGPLVRSSYKAGEFFIGSVLRNRKAAAEA 118
           KV+EYVTPEK+ HWE+ GN +GFLYTASGPLVRSSYKAGEFFI S+L NRK    A
Sbjct: 315 KVIEYVTPEKFKHWEERGNELGFLYTASGPLVRSSYKAGEFFITSILENRKKRQNA 370

Source: Drosophila sechellia

Species: Drosophila sechellia

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|221513272|ref|NP_524183.2| lipoic acid synthase [Drosophila melanogaster] gi|306756317|sp|Q7JQW6.2|LIAS_DROME RecName: Full=Lipoyl synthase, mitochondrial; AltName: Full=Lipoate synthase; Short=LS; Short=Lip-syn; AltName: Full=Lipoic acid synthase; Flags: Precursor gi|220902670|gb|AAF51596.2| lipoic acid synthase [Drosophila melanogaster]

 Score = 95.9 bits (237), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 41/51 (80%), Positives = 46/51 (90%)

Query: 63  KVVEYVTPEKYAHWEKVGNSMGFLYTASGPLVRSSYKAGEFFIGSVLRNRK 113
           KV+EYVTPEK+ HWE+ GN +GFLYTASGPLVRSSYKAGEFFI S+L NRK
Sbjct: 315 KVIEYVTPEKFKHWEERGNELGFLYTASGPLVRSSYKAGEFFITSILENRK 365

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	123
FB|FBgn0029158	377	Las "Lipoic acid synthase" [Dr	0.544	0.177	0.642	7.9e-19
UNIPROTKB|Q5BIP7	372	LIAS "Lipoyl synthase, mitocho	0.520	0.172	0.621	1.9e-18
MGI|MGI:1934604	373	Lias "lipoic acid synthetase"	0.520	0.171	0.651	1e-17
ZFIN|ZDB-GENE-040426-1528	399	lias "lipoic acid synthetase"	0.552	0.170	0.628	1.8e-17
UNIPROTKB|F1NEN8	339	LIAS "Uncharacterized protein"	0.495	0.179	0.650	6.7e-17
UNIPROTKB|I3LGA8	372	LIAS "Lipoyl synthase, mitocho	0.520	0.172	0.621	8.2e-17
UNIPROTKB|E2R257	373	LIAS "Lipoyl synthase, mitocho	0.528	0.174	0.597	1.1e-16
UNIPROTKB|D6RCP8	242	LIAS "Lipoyl synthase, mitocho	0.495	0.252	0.619	1.4e-16
UNIPROTKB|C9JCF6	329	LIAS "Lipoyl synthase, mitocho	0.495	0.185	0.619	2.1e-16
UNIPROTKB|O43766	372	LIAS "Lipoyl synthase, mitocho	0.495	0.163	0.619	3.9e-16

FB|FBgn0029158 Las "Lipoic acid synthase" [Drosophila melanogaster (taxid:7227)]

 Score = 229 (85.7 bits), Expect = 7.9e-19, P = 7.9e-19
 Identities = 45/70 (64%), Positives = 55/70 (78%)

Query:    45 LNCPVV-EYVTPEKYAHWEKVVEYVTPEKYAHWEKVGNSMGFLYTASGPLVRSSYKAGEF 103
             ++C  + +Y+ P    H  KV+EYVTPEK+ HWE+ GN +GFLYTASGPLVRSSYKAGEF
Sbjct:   298 VDCVTLGQYMQPTN-KHL-KVIEYVTPEKFKHWEERGNELGFLYTASGPLVRSSYKAGEF 355

Query:   104 FIGSVLRNRK 113
             FI S+L NRK
Sbjct:   356 FITSILENRK 365

GO:0009107 "lipoate biosynthetic process" evidence=ISS

GO:0005739 "mitochondrion" evidence=ISS

GO:0016992 "lipoate synthase activity" evidence=ISS

GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA

UNIPROTKB|Q5BIP7 LIAS "Lipoyl synthase, mitochondrial" [Bos taurus (taxid:9913)]

 Score = 211 (79.3 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
 Identities = 41/66 (62%), Positives = 51/66 (77%)

Query:    51 EYVTPEKYAHWEKVVEYVTPEKYAHWEKVGNSMGFLYTASGPLVRSSYKAGEFFIGSVLR 110
             +Y+ P K  H  KV EY+TPEK+ +WEKVGN +GF YTASGPLVRSSYKAGEFF+ +++ 
Sbjct:   308 QYMQPTK-RHL-KVEEYITPEKFKYWEKVGNELGFHYTASGPLVRSSYKAGEFFLKNLVA 365

Query:   111 NRKAAA 116
              RK  A
Sbjct:   366 KRKTKA 371

GO:0005739 "mitochondrion" evidence=IEA

GO:0032496 "response to lipopolysaccharide" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IEA

GO:0006954 "inflammatory response" evidence=IEA

GO:0001843 "neural tube closure" evidence=IEA

GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA

GO:0009249 "protein lipoylation" evidence=IEA

GO:0016992 "lipoate synthase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

MGI|MGI:1934604 Lias "lipoic acid synthetase" [Mus musculus (taxid:10090)]

 Score = 219 (82.2 bits), Expect = 1.0e-17, P = 1.0e-17
 Identities = 43/66 (65%), Positives = 52/66 (78%)

Query:    51 EYVTPEKYAHWEKVVEYVTPEKYAHWEKVGNSMGFLYTASGPLVRSSYKAGEFFIGSVLR 110
             +Y+ P K  H  KV EYVTPEK+ +WEKVGN +GFLYTASGPLVRSSYKAGEFF+ +++ 
Sbjct:   307 QYMQPTK-RHL-KVEEYVTPEKFKYWEKVGNELGFLYTASGPLVRSSYKAGEFFLKNLVA 364

Query:   111 NRKAAA 116
              RK  A
Sbjct:   365 RRKTKA 370

GO:0001843 "neural tube closure" evidence=IMP

GO:0003824 "catalytic activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

GO:0006954 "inflammatory response" evidence=IMP

GO:0006979 "response to oxidative stress" evidence=IMP

GO:0009107 "lipoate biosynthetic process" evidence=IGI

GO:0016740 "transferase activity" evidence=IEA

GO:0016992 "lipoate synthase activity" evidence=IGI

GO:0032496 "response to lipopolysaccharide" evidence=IMP

GO:0046872 "metal ion binding" evidence=IEA

GO:0051536 "iron-sulfur cluster binding" evidence=IEA

GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA

ZFIN|ZDB-GENE-040426-1528 lias "lipoic acid synthetase" [Danio rerio (taxid:7955)]

 Score = 218 (81.8 bits), Expect = 1.8e-17, P = 1.8e-17
 Identities = 44/70 (62%), Positives = 51/70 (72%)

Query:    51 EYVTPEKYAHWEKVVEYVTPEKYAHWEKVGNSMGFLYTASGPLVRSSYKAGEFFIGSVLR 110
             +Y+ P K  H  KV EYVTPEK+A WEKVG  MGF+YTASGPLVRSSYKAGEFF+ ++L 
Sbjct:   330 QYMQPTK-RHL-KVEEYVTPEKFAFWEKVGQEMGFIYTASGPLVRSSYKAGEFFLKNLLE 387

Query:   111 NRKAAAEAKT 120
              RK      T
Sbjct:   388 KRKTEETTAT 397

GO:0003824 "catalytic activity" evidence=IEA

GO:0051536 "iron-sulfur cluster binding" evidence=IEA

GO:0016992 "lipoate synthase activity" evidence=IEA

GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA

GO:0009107 "lipoate biosynthetic process" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0009249 "protein lipoylation" evidence=IEA

UNIPROTKB|F1NEN8 LIAS "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 210 (79.0 bits), Expect = 6.7e-17, P = 6.7e-17
 Identities = 41/63 (65%), Positives = 50/63 (79%)

Query:    51 EYVTPEKYAHWEKVVEYVTPEKYAHWEKVGNSMGFLYTASGPLVRSSYKAGEFFIGSVLR 110
             +Y+ P K  H  KV EYVTPEK+ +WEKVGN +GF YTASGPLVRSSYKAGEFF+ +++ 
Sbjct:   275 QYMQPTK-RHL-KVEEYVTPEKFKYWEKVGNDLGFHYTASGPLVRSSYKAGEFFLKNLVE 332

Query:   111 NRK 113
              RK
Sbjct:   333 KRK 335

GO:0016992 "lipoate synthase activity" evidence=IEA

GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA

UNIPROTKB|I3LGA8 LIAS "Lipoyl synthase, mitochondrial" [Sus scrofa (taxid:9823)]

 Score = 211 (79.3 bits), Expect = 8.2e-17, P = 8.2e-17
 Identities = 41/66 (62%), Positives = 51/66 (77%)

Query:    51 EYVTPEKYAHWEKVVEYVTPEKYAHWEKVGNSMGFLYTASGPLVRSSYKAGEFFIGSVLR 110
             +Y+ P K  H  KV EY+TPEK+ +WEKVGN +GF YTASGPLVRSSYKAGEFF+ +++ 
Sbjct:   308 QYMQPTK-RHL-KVEEYITPEKFKYWEKVGNELGFHYTASGPLVRSSYKAGEFFLKNLVA 365

Query:   111 NRKAAA 116
              RK  A
Sbjct:   366 KRKTKA 371

GO:0005739 "mitochondrion" evidence=IEA

GO:0032496 "response to lipopolysaccharide" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IEA

GO:0006954 "inflammatory response" evidence=IEA

GO:0001843 "neural tube closure" evidence=IEA

GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA

GO:0009249 "protein lipoylation" evidence=IEA

GO:0016992 "lipoate synthase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|E2R257 LIAS "Lipoyl synthase, mitochondrial" [Canis lupus familiaris (taxid:9615)]

 Score = 210 (79.0 bits), Expect = 1.1e-16, P = 1.1e-16
 Identities = 40/67 (59%), Positives = 53/67 (79%)

Query:    51 EYVTPEKYAHWEKVVEYVTPEKYAHWEKVGNSMGFLYTASGPLVRSSYKAGEFFIGSVLR 110
             +Y+ P K  H  KV EY+TPEK+ +WEKVGN +GF YTASGPLVRSSYKAGEFF+ +++ 
Sbjct:   308 QYMQPTK-RHL-KVEEYITPEKFKYWEKVGNELGFHYTASGPLVRSSYKAGEFFLKNLVA 365

Query:   111 NRKAAAE 117
              RK +++
Sbjct:   366 KRKKSSK 372

GO:0005739 "mitochondrion" evidence=IEA

GO:0032496 "response to lipopolysaccharide" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IEA

GO:0006954 "inflammatory response" evidence=IEA

GO:0001843 "neural tube closure" evidence=IEA

GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA

GO:0009249 "protein lipoylation" evidence=IEA

GO:0016992 "lipoate synthase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|D6RCP8 LIAS "Lipoyl synthase, mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
 Identities = 39/63 (61%), Positives = 50/63 (79%)

Query:    51 EYVTPEKYAHWEKVVEYVTPEKYAHWEKVGNSMGFLYTASGPLVRSSYKAGEFFIGSVLR 110
             +Y+ P +  H  KV EY+TPEK+ +WEKVGN +GF YTASGPLVRSSYKAGEFF+ +++ 
Sbjct:   178 QYMQPTR-RHL-KVEEYITPEKFKYWEKVGNELGFHYTASGPLVRSSYKAGEFFLKNLVA 235

Query:   111 NRK 113
              RK
Sbjct:   236 KRK 238

GO:0016992 "lipoate synthase activity" evidence=IEA

GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA

UNIPROTKB|C9JCF6 LIAS "Lipoyl synthase, mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 205 (77.2 bits), Expect = 2.1e-16, P = 2.1e-16
 Identities = 39/63 (61%), Positives = 50/63 (79%)

Query:    51 EYVTPEKYAHWEKVVEYVTPEKYAHWEKVGNSMGFLYTASGPLVRSSYKAGEFFIGSVLR 110
             +Y+ P +  H  KV EY+TPEK+ +WEKVGN +GF YTASGPLVRSSYKAGEFF+ +++ 
Sbjct:   265 QYMQPTR-RHL-KVEEYITPEKFKYWEKVGNELGFHYTASGPLVRSSYKAGEFFLKNLVA 322

Query:   111 NRK 113
              RK
Sbjct:   323 KRK 325

GO:0046872 "metal ion binding" evidence=IEA

GO:0009249 "protein lipoylation" evidence=IEA

GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA

GO:0016992 "lipoate synthase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

UNIPROTKB|O43766 LIAS "Lipoyl synthase, mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 205 (77.2 bits), Expect = 3.9e-16, P = 3.9e-16
 Identities = 39/63 (61%), Positives = 50/63 (79%)

Query:    51 EYVTPEKYAHWEKVVEYVTPEKYAHWEKVGNSMGFLYTASGPLVRSSYKAGEFFIGSVLR 110
             +Y+ P +  H  KV EY+TPEK+ +WEKVGN +GF YTASGPLVRSSYKAGEFF+ +++ 
Sbjct:   308 QYMQPTR-RHL-KVEEYITPEKFKYWEKVGNELGFHYTASGPLVRSSYKAGEFFLKNLVA 365

Query:   111 NRK 113
              RK
Sbjct:   366 KRK 368

GO:0046872 "metal ion binding" evidence=IEA

GO:0009249 "protein lipoylation" evidence=IEA

GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA

GO:0001843 "neural tube closure" evidence=IEA

GO:0016992 "lipoate synthase activity" evidence=ISS

GO:0032496 "response to lipopolysaccharide" evidence=ISS

GO:0009107 "lipoate biosynthetic process" evidence=ISS

GO:0006979 "response to oxidative stress" evidence=ISS

GO:0006954 "inflammatory response" evidence=ISS

GO:0005739 "mitochondrion" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P0CO58	LIPA_CRYNJ	2, ., 8, ., 1, ., 8	0.6031	0.4959	0.1544	yes	N/A
Q5XIH4	LIAS_RAT	2, ., 8, ., 1, ., 8	0.6190	0.4959	0.1635	yes	N/A
Q6FPY0	LIPA_CANGA	2, ., 8, ., 1, ., 8	0.5753	0.5528	0.1752	yes	N/A
B5RUV1	LIPA_DEBHA	2, ., 8, ., 1, ., 8	0.5416	0.5447	0.1696	yes	N/A
Q6C6C6	LIPA_YARLI	2, ., 8, ., 1, ., 8	0.6981	0.4308	0.1509	yes	N/A
C5DY71	LIPA_ZYGRC	2, ., 8, ., 1, ., 8	0.5972	0.5447	0.1735	yes	N/A
Q6CLS2	LIPA_KLULA	2, ., 8, ., 1, ., 8	0.56	0.5691	0.1891	yes	N/A
P32875	LIPA_YEAST	2, ., 8, ., 1, ., 8	0.5633	0.5365	0.1594	yes	N/A
Q99M04	LIAS_MOUSE	2, ., 8, ., 1, ., 8	0.6363	0.5203	0.1715	yes	N/A
Q74ZH6	LIPA_ASHGO	2, ., 8, ., 1, ., 8	0.5466	0.5691	0.1897	yes	N/A
Q5BIP7	LIAS_BOVIN	2, ., 8, ., 1, ., 8	0.6212	0.5203	0.1720	yes	N/A
B9WFS9	LIPA_CANDC	2, ., 8, ., 1, ., 8	0.5555	0.5447	0.1735	yes	N/A
A3GGJ5	LIPA_PICST	2, ., 8, ., 1, ., 8	0.5833	0.5447	0.1683	yes	N/A
Q6PHG4	LIAS_DANRE	2, ., 8, ., 1, ., 8	0.6142	0.5528	0.1704	yes	N/A
C4QYF2	LIPA_PICPG	2, ., 8, ., 1, ., 8	0.5125	0.6097	0.1798	yes	N/A
Q7JQW6	LIAS_DROME	2, ., 8, ., 1, ., 8	0.8039	0.4146	0.1352	yes	N/A
Q6L534	LISC2_ORYSJ	2, ., 8, ., 1, ., 8	0.6153	0.4227	0.1354	yes	N/A
C5DGZ5	LIPA_LACTC	2, ., 8, ., 1, ., 8	0.5694	0.5447	0.1805	yes	N/A
O43766	LIAS_HUMAN	2, ., 8, ., 1, ., 8	0.7058	0.4146	0.1370	yes	N/A
Q2LYK1	LIAS_DROPS	2, ., 8, ., 1, ., 8	0.8076	0.4227	0.1390	yes	N/A
C3Y3G4	LIAS_BRAFL	2, ., 8, ., 1, ., 8	0.5416	0.5691	0.1861	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.8.1	LOW CONFIDENCE prediction!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	123
PLN02428	349	PLN02428, PLN02428, lipoic acid synthase	3e-25
PTZ00413	398	PTZ00413, PTZ00413, lipoate synthase; Provisional	4e-20
COG0320	306	COG0320, LipA, Lipoate synthase [Coenzyme metaboli	8e-18
PRK05481	289	PRK05481, PRK05481, lipoyl synthase; Provisional	2e-17
TIGR00510	302	TIGR00510, lipA, lipoate synthase	9e-17
PRK12928	290	PRK12928, PRK12928, lipoyl synthase; Provisional	2e-12

>gnl|CDD|215236 PLN02428, PLN02428, lipoic acid synthase

 Score = 96.7 bits (241), Expect = 3e-25
 Identities = 36/55 (65%), Positives = 41/55 (74%)

Query: 64  VVEYVTPEKYAHWEKVGNSMGFLYTASGPLVRSSYKAGEFFIGSVLRNRKAAAEA 118
           V EYVTPEK+  W + G  MGF Y ASGPLVRSSYKAGEFFI S++R  +A A A
Sbjct: 294 VKEYVTPEKFEFWREYGEEMGFRYVASGPLVRSSYKAGEFFIKSMIREDRAKAAA 348

Length = 349

>gnl|CDD|240408 PTZ00413, PTZ00413, lipoate synthase; Provisional

 Score = 83.3 bits (206), Expect = 4e-20
 Identities = 27/54 (50%), Positives = 39/54 (72%)

Query: 63  KVVEYVTPEKYAHWEKVGNSMGFLYTASGPLVRSSYKAGEFFIGSVLRNRKAAA 116
           KV  Y  P+++  WE+    MGFLY ASGPLVRSSY+AGE++I ++++ R+ A 
Sbjct: 341 KVSRYAHPKEFEMWEEEAMKMGFLYCASGPLVRSSYRAGEYYIKNLVKQRRKAK 394

Length = 398

>gnl|CDD|223397 COG0320, LipA, Lipoate synthase [Coenzyme metabolism]

 Score = 76.5 bits (189), Expect = 8e-18
 Identities = 27/59 (45%), Positives = 36/59 (61%), Gaps = 2/59 (3%)

Query: 52  YVTPEKYAHWEKVVEYVTPEKYAHWEKVGNSMGFLYTASGPLVRSSYKAGEFFIGSVLR 110
           Y+ P +      V  YVTPE++   E+V   MGFL+ ASGPLVRSSY A E F  + ++
Sbjct: 250 YLQPSRKHL--PVQRYVTPEEFDELEEVAEEMGFLHVASGPLVRSSYHADEQFAEAEVK 306

Length = 306

>gnl|CDD|235493 PRK05481, PRK05481, lipoyl synthase; Provisional

 Score = 75.1 bits (186), Expect = 2e-17
 Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 1/45 (2%)

Query: 60  HWEKVVEYVTPEKYAHWEKVGNSMGFLYTASGPLVRSSYKAGEFF 104
           H   V  YVTPE++  ++++   +GFL+ ASGPLVRSSY A E  
Sbjct: 240 HLP-VERYVTPEEFDEYKEIALELGFLHVASGPLVRSSYHADEQA 283

Length = 289

>gnl|CDD|233002 TIGR00510, lipA, lipoate synthase

 Score = 73.7 bits (181), Expect = 9e-17
 Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 2/60 (3%)

Query: 51  EYVTPEKYAHWEKVVEYVTPEKYAHWEKVGNSMGFLYTASGPLVRSSYKAGEFFIGSVLR 110
           +Y+ P +      V  YV+PE++ ++  V   MGFL+ A GP VRSSY A   F    L 
Sbjct: 243 QYLRPSR--RHLPVKRYVSPEEFDYYRSVALEMGFLHAACGPFVRSSYHADSLFAAGRLV 300

This enzyme is an iron-sulfur protein. It is localized to mitochondria in yeast and Arabidopsis. It generates lipoic acid, a thiol antioxidant that is linked to a specific Lys as prosthetic group for the pyruvate and alpha-ketoglutarate dehydrogenase complexes and the glycine-cleavage system. The family shows strong sequence conservation [Biosynthesis of cofactors, prosthetic groups, and carriers, Lipoate]. Length = 302

>gnl|CDD|237261 PRK12928, PRK12928, lipoyl synthase; Provisional

 Score = 61.9 bits (151), Expect = 2e-12
 Identities = 19/39 (48%), Positives = 25/39 (64%)

Query: 64  VVEYVTPEKYAHWEKVGNSMGFLYTASGPLVRSSYKAGE 102
           V  Y TPE++    ++   +GF +  SGPLVRSSY AGE
Sbjct: 251 VQRYWTPEEFEALGQIARELGFSHVRSGPLVRSSYHAGE 289

Length = 290

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	123
PTZ00413	398	lipoate synthase; Provisional	99.95
PLN02428	349	lipoic acid synthase	99.95
COG0320	306	LipA Lipoate synthase [Coenzyme metabolism]	99.95
TIGR00510	302	lipA lipoate synthase. The family shows strong seq	99.95
KOG2672|consensus	360		99.93
PRK12928	290	lipoyl synthase; Provisional	99.92
PRK05481	289	lipoyl synthase; Provisional	99.62

>PTZ00413 lipoate synthase; Provisional

Probab=99.95  E-value=3.9e-29  Score=213.65  Aligned_cols=90  Identities=37%  Similarity=0.678  Sum_probs=77.4

Q ss_pred             ccCCCCccccchhh---------hhhhccccccccccccCCCCCCCccccceecChHHHHHHHHHHHhcCCceeeecccc
Q psy6796          24 LNCPGGLSSMGSKL---------AYSMGFALNCPVVEYVTPEKYAHWEKVVEYVTPEKYAHWEKVGNSMGFLYTASGPLV   94 (123)
Q Consensus        24 ~~~~~~~~~~~~~~---------~~~~~~a~~lTIGQYLqPSk~~~HlpV~rYVtPEeF~~~k~~a~~mGF~~VaSGPLV   94 (123)
                      ..|-|++-.||-..         .+..| .-.+|||||||||++  |+||+|||+||||+.|+++|++|||++|+|||||
T Consensus       296 ~tcSGiIVGLGET~eEvie~m~dLrelG-VDivtIGQYL~Ps~~--h~~V~~yv~P~~F~~~~~~a~~~Gf~~v~sgPlV  372 (398)
T PTZ00413        296 LTKSSIMLGLGETEEEVRQTLRDLRTAG-VSAVTLGQYLQPTKT--RLKVSRYAHPKEFEMWEEEAMKMGFLYCASGPLV  372 (398)
T ss_pred             eEeeeeEecCCCCHHHHHHHHHHHHHcC-CcEEeeccccCCCcc--cCCceeccCHHHHHHHHHHHHHcCCceEEecCcc
Confidence            36888888888643         23333 235699999999999  9999999999999999999999999999999999


Q ss_pred             ccchhhhHHHHHHHHHHHHHHH
Q psy6796          95 RSSYKAGEFFIGSVLRNRKAAA  116 (123)
Q Consensus        95 RSSY~A~e~~~~~~l~~~~~~~  116 (123)
                      ||||||+|.+.+++++.|+...
T Consensus       373 RSSY~A~e~~~~~~~~~r~~~~  394 (398)
T PTZ00413        373 RSSYRAGEYYIKNLVKQRRKAK  394 (398)
T ss_pred             ccchhccHHHHHHHHHhhhhhc
Confidence            9999999998888887777654

>PLN02428 lipoic acid synthase

Probab=99.95  E-value=3.9e-29  Score=208.57  Aligned_cols=78  Identities=51%  Similarity=0.853  Sum_probs=71.1

Q ss_pred             hhhhccccccccccccCCCCCCCccccceecChHHHHHHHHHHHhcCCceeeeccccccchhhhHHHHHHHHHHHHHHHH
Q psy6796          38 AYSMGFALNCPVVEYVTPEKYAHWEKVVEYVTPEKYAHWEKVGNSMGFLYTASGPLVRSSYKAGEFFIGSVLRNRKAAAE  117 (123)
Q Consensus        38 ~~~~~~a~~lTIGQYLqPSk~~~HlpV~rYVtPEeF~~~k~~a~~mGF~~VaSGPLVRSSY~A~e~~~~~~l~~~~~~~~  117 (123)
                      ....|+-. +|||||||||+.  |+||.+||+||+|++|+++|++|||++|+|||||||||||+|.+.++++++++++++
T Consensus       271 Lrelgvd~-vtigqyL~Ps~~--h~~v~~~v~p~~f~~~~~~~~~~gf~~v~sgp~vrssy~a~~~~~~~~~~~~~~~~~  347 (349)
T PLN02428        271 LRAAGVDV-VTFGQYLRPTKR--HLPVKEYVTPEKFEFWREYGEEMGFRYVASGPLVRSSYKAGEFFIKSMIREDRAKAA  347 (349)
T ss_pred             HHHcCCCE-EeeccccCCCcc--eeeeecccCHHHHHHHHHHHHHcCCceEEecCcccchhhhHHHHHHHHHHhhccccc
Confidence            34555544 799999999999  999999999999999999999999999999999999999999999999999987665


Q ss_pred             H
Q psy6796         118 A  118 (123)
Q Consensus       118 ~  118 (123)
                      +
T Consensus       348 ~  348 (349)
T PLN02428        348 A  348 (349)
T ss_pred             c
Confidence            4

>COG0320 LipA Lipoate synthase [Coenzyme metabolism]

Probab=99.95  E-value=2.9e-29  Score=209.19  Aligned_cols=61  Identities=44%  Similarity=0.685  Sum_probs=58.2

Q ss_pred             ccccccccCCCCCCCccccceecChHHHHHHHHHHHhcCCceeeeccccccchhhhHHHHHHH
Q psy6796          46 NCPVVEYVTPEKYAHWEKVVEYVTPEKYAHWEKVGNSMGFLYTASGPLVRSSYKAGEFFIGSV  108 (123)
Q Consensus        46 ~lTIGQYLqPSk~~~HlpV~rYVtPEeF~~~k~~a~~mGF~~VaSGPLVRSSY~A~e~~~~~~  108 (123)
                      -||||||||||++  |+||+|||+||||+.|+++|++|||++|+|||||||||||++.|.++.
T Consensus       244 ilTiGQYlqPS~~--HlpV~ryv~PeeF~~~~~~a~~~GF~~v~sgPlvRSSYhA~~~~~~~~  304 (306)
T COG0320         244 ILTIGQYLQPSRK--HLPVQRYVTPEEFDELEEVAEEMGFLHVASGPLVRSSYHADEQFAEAE  304 (306)
T ss_pred             EEEeccccCCccc--cCCceeccCHHHHHHHHHHHHHccchhhccCcccccccchHHHHHHhh
Confidence            3799999999999  999999999999999999999999999999999999999999997663

>TIGR00510 lipA lipoate synthase

Probab=99.95  E-value=7.3e-29  Score=201.80  Aligned_cols=71  Identities=34%  Similarity=0.576  Sum_probs=64.8

Q ss_pred             hhhccccccccccccCCCCCCCccccceecChHHHHHHHHHHHhcCCceeeeccccccchhhhHHHHHHHHHHH
Q psy6796          39 YSMGFALNCPVVEYVTPEKYAHWEKVVEYVTPEKYAHWEKVGNSMGFLYTASGPLVRSSYKAGEFFIGSVLRNR  112 (123)
Q Consensus        39 ~~~~~a~~lTIGQYLqPSk~~~HlpV~rYVtPEeF~~~k~~a~~mGF~~VaSGPLVRSSY~A~e~~~~~~l~~~  112 (123)
                      ..+|+ -.+|||||||||++  |+||.+||+|++|+.|+++|++|||++|+|||||||||||+|.+.+++++++
T Consensus       232 relg~-d~v~igqYl~p~~~--~~~v~~~~~p~~f~~~~~~a~~~gf~~v~~~p~vrssy~a~~~~~~~~~~~~  302 (302)
T TIGR00510       232 RDHGV-TMVTLGQYLRPSRR--HLPVKRYVSPEEFDYYRSVALEMGFLHAACGPFVRSSYHADSLFAAGRLVKT  302 (302)
T ss_pred             HhcCC-CEEEeecccCCCCC--CCccccCCCHHHHHHHHHHHHHcCChheEecccchhhhhHHHHHHHHHhccC
Confidence            34444 35899999999999  9999999999999999999999999999999999999999999999987653

The family shows strong sequence conservation.

>KOG2672|consensus

Probab=99.93  E-value=1.2e-26  Score=195.89  Aligned_cols=71  Identities=54%  Similarity=0.913  Sum_probs=67.4

Q ss_pred             ccccccccCCCCCCCccccceecChHHHHHHHHHHHhcCCceeeeccccccchhhhHHHHHHHHHHHHHHHHH
Q psy6796          46 NCPVVEYVTPEKYAHWEKVVEYVTPEKYAHWEKVGNSMGFLYTASGPLVRSSYKAGEFFIGSVLRNRKAAAEA  118 (123)
Q Consensus        46 ~lTIGQYLqPSk~~~HlpV~rYVtPEeF~~~k~~a~~mGF~~VaSGPLVRSSY~A~e~~~~~~l~~~~~~~~~  118 (123)
                      -+|+||||||+++  |++|++||+||.|+.|++++++|||.||+|||||||||+|+|+|+++++++|+.....
T Consensus       287 v~t~gqym~ptkr--hl~v~eyvtpekf~~w~~~~~~lgf~y~AsgplvrSsykage~~i~~~l~~r~~~~~s  357 (360)
T KOG2672|consen  287 VVTFGQYMQPTKR--HLKVKEYVTPEKFDYWKEYGEELGFLYVASGPLVRSSYKAGEYFIKNVLEKRKSKNSS  357 (360)
T ss_pred             EEecccccCCccc--cceeEEeeCHHHHHHHHHHhhhcceEEeccCceeechhhhhHHHHHHHHHhcccCCCc
Confidence            4699999999999  9999999999999999999999999999999999999999999999999999876543

>PRK12928 lipoyl synthase; Provisional

Probab=99.92  E-value=1.7e-26  Score=185.90  Aligned_cols=61  Identities=36%  Similarity=0.591  Sum_probs=56.8

Q ss_pred             hhhccccccccccccCCCCCCCccccceecChHHHHHHHHHHHhcCCceeeeccccccchhhhH
Q psy6796          39 YSMGFALNCPVVEYVTPEKYAHWEKVVEYVTPEKYAHWEKVGNSMGFLYTASGPLVRSSYKAGE  102 (123)
Q Consensus        39 ~~~~~a~~lTIGQYLqPSk~~~HlpV~rYVtPEeF~~~k~~a~~mGF~~VaSGPLVRSSY~A~e  102 (123)
                      -..++ ..+|||||||||++  |+||.|||+|++|++|+++|++|||++|+|||||||||||+|
T Consensus       229 rel~~-d~v~i~~Yl~p~~~--~~~v~~~~~~~~f~~~~~~~~~~g~~~~~~~p~~rssy~a~~  289 (290)
T PRK12928        229 RAVGC-DRLTIGQYLRPSLA--HLPVQRYWTPEEFEALGQIARELGFSHVRSGPLVRSSYHAGE  289 (290)
T ss_pred             HhcCC-CEEEEEcCCCCCcc--CCceeeccCHHHHHHHHHHHHHcCCceeEecCcccccccCCC
Confidence            34454 57899999999999  999999999999999999999999999999999999999986

>PRK05481 lipoyl synthase; Provisional

Probab=99.62  E-value=2.7e-16  Score=126.00  Aligned_cols=65  Identities=38%  Similarity=0.625  Sum_probs=58.7

Q ss_pred             hhhccccccccccccCCCCCCCccccceecChHHHHHHHHHHHhcCCceeeeccccccchhhhHHHHH
Q psy6796          39 YSMGFALNCPVVEYVTPEKYAHWEKVVEYVTPEKYAHWEKVGNSMGFLYTASGPLVRSSYKAGEFFIG  106 (123)
Q Consensus        39 ~~~~~a~~lTIGQYLqPSk~~~HlpV~rYVtPEeF~~~k~~a~~mGF~~VaSGPLVRSSY~A~e~~~~  106 (123)
                      -.++| ..+.|+||++|+.+  |++|.+++.++.|+++.++++++||++|+|||||||||+|++.+..
T Consensus       221 rel~~-d~v~if~Ys~pa~k--~~~v~~~~k~~r~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  285 (289)
T PRK05481        221 RAAGV-DILTIGQYLQPSRK--HLPVERYVTPEEFDEYKEIALELGFLHVASGPLVRSSYHADEQAAG  285 (289)
T ss_pred             HhcCC-CEEEEEccCCCccc--cCCCCCcCCHHHHHHHHHHHHHcCchheEecCccccchhhHHHHhh
Confidence            34555 57899999999997  7899999999999999999999999999999999999999997543

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00