Psyllid ID: psy691

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130----
Protein Sequence
MVILGLPKGVTLEFVNGGHGVKNPLANHDVSAIIPPPPPPTRVEPEKVESTTGRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDGKTNVLTTEYLVVV
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHccccccccccccccccccccccccccHHcccccccccccccccccccccccEEEc
Secondary Structure Prediction (SSPRO)
ccEccccccccEEEEccccccccccccccccccccccccccccccccccccccccccccEEccccccEEccHHHHHHHcHHHHccccEEccccccEEccHHHHHHHHHHHHccccccccccccEEEEEEEEEEc
Coil and Loop (DISEMBL)
mvilglpkgvtlefvngghgvknplanhdvsaiipppppptrvepekvesttgrkdntrfachlcskSFSLQRLLNRHMKCHSDVKRYLCTfcgkgfndtfdlkrhtrthtgkeeeeeedgktnvltteYLVVV
Flexible Loop (DISEMBL)
MVILGLPKGVTLEFVNGGHGVKNPLANHDVSAiipppppptrvepEKVEsttgrkdntrfaCHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCgkgfndtfdlKRHTrthtgkeeeeeedgktnvltteylvvv
Low Complexity Region (SEG)
MVILGLPKGVTLEFVNGGHGVKNPLANHDVSAIIppppppTRVEPEKVESTTGRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKeeeeeeDGKTNVLTTEYLVVV
Disordered region (IsUnstruct)
**********************************************************RFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDL*******************************
Disordered Region (DISOPRED)
*****LPKGVTLEFVNGGHGVKNPLANHDVSAIIPPP*************TTGRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDGKTNVLTTEYLVVV
Disordered Region (DISEMBL)
MVILGLPKGVTLEFVNGGHGVKNPLANHDVSAIIPPPPPP*************RKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRH****************TNVLTTEYLVVV
Disordered Region (DISPRO)
*VILGLPKGVTLEFVNGGHGVKN**********************************TRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDGKTNVLTTEYLVVV
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MVILGLPKGVTLEFVNGGHGVKNPLANHDVSAIIPPPPPPTRVEPEKVESTTGRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDGKTNVLTTEYLVVV
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	134	2.2.26 [Sep-21-2011]
P51521	1351	Protein ovo OS=Drosophila	no	N/A	0.417	0.041	0.857	4e-25
Q9WTJ2	267	Putative transcription fa	yes	N/A	0.731	0.367	0.555	1e-22
Q8CIV7	274	Transcription factor Ovo-	no	N/A	0.522	0.255	0.690	6e-22
A2VDT4	267	Putative transcription fa	yes	N/A	0.395	0.198	0.792	6e-22
Q9BRP0	275	Transcription factor Ovo-	yes	N/A	0.522	0.254	0.661	4e-21
O14753	267	Putative transcription fa	no	N/A	0.395	0.198	0.773	5e-21
O00110	214	Putative transcription fa	no	N/A	0.544	0.341	0.534	2e-17
D3YYM0	220	Putative transcription fa	no	N/A	0.552	0.336	0.513	2e-16
P53968	678	Transcriptional regulator	yes	N/A	0.514	0.101	0.4	2e-09
Q9Y2D9	606	Zinc finger protein 652 O	no	N/A	0.395	0.087	0.410	6e-09

>sp|P51521|OVO_DROME Protein ovo OS=Drosophila melanogaster GN=ovo PE=1 SV=2

 Score =  113 bits (282), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 48/56 (85%), Positives = 52/56 (92%)

Query: 57   NTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
            N +F C +C K+FSLQRLLNRHMKCHSD+KRYLCTFCGKGFNDTFDLKRHTRTHTG
Sbjct: 1194 NNKFVCRVCMKTFSLQRLLNRHMKCHSDIKRYLCTFCGKGFNDTFDLKRHTRTHTG 1249

Required for the survival and differentiation of female germline cells. Plays a role in germline sex determination. Also has a somatic role regulating denticle formation and initiating cytoskeletal remodeling during epidermal differentiation. The different isoforms act antagonistically to each other having transcriptional repressor or activator activity. Binds the promoter DNA and regulates the transcription of the otu gene in a stage-specific manner.
Drosophila melanogaster (taxid: 7227)

>sp|Q9WTJ2|OVOL1_MOUSE Putative transcription factor Ovo-like 1 OS=Mus musculus GN=Ovol1 PE=2 SV=1

 Score =  105 bits (261), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 55/99 (55%), Positives = 65/99 (65%), Gaps = 1/99 (1%)

Query: 15  VNGGHGVKNPLANHDVSAIIPPPPPPTRVEPEKVESTTGRKDN-TRFACHLCSKSFSLQR 73
           V  G  V   L + DVS +  P          K++ T G   N   F CH+C KSF+ QR
Sbjct: 72  VAPGPCVVAQLPSEDVSHLTDPQSRDQGFLRTKMKVTLGDSPNGDLFTCHICQKSFTHQR 131

Query: 74  LLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
           +LNRHMKCH+DVKR+LCT+CGKGFNDTFDLKRH RTHTG
Sbjct: 132 MLNRHMKCHNDVKRHLCTYCGKGFNDTFDLKRHVRTHTG 170

Putative transcription factor. Involved in hair formation and spermatogenesis. May function in the differentiation and/or maintenance of the urogenital system.

Mus musculus (taxid: 10090)

>sp|Q8CIV7|OVOL2_MOUSE Transcription factor Ovo-like 2 OS=Mus musculus GN=Ovol2 PE=2 SV=2

 Score =  102 bits (255), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 49/71 (69%), Positives = 56/71 (78%), Gaps = 1/71 (1%)

Query: 43  VEPEKVESTTGRKDNTRF-ACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTF 101
           V   K++ TTG  DN+    C LC KSF LQR+LNRH+KCH+ VKR+LCTFCGKGFNDTF
Sbjct: 100 VARSKIKFTTGTCDNSVIHNCDLCGKSFRLQRMLNRHLKCHNQVKRHLCTFCGKGFNDTF 159

Query: 102 DLKRHTRTHTG 112
           DLKRH RTHTG
Sbjct: 160 DLKRHVRTHTG 170

DNA-binding protein that binds to the 5'-G[GCT]GGGGG-3' core sequence. Probably acts as a transcription regulator.

Mus musculus (taxid: 10090)

>sp|A2VDT4|OVOL1_BOVIN Putative transcription factor Ovo-like 1 OS=Bos taurus GN=OVOL1 PE=2 SV=1

 Score =  102 bits (255), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 42/53 (79%), Positives = 49/53 (92%)

Query: 60  FACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
           F CH+C K+F+ QR+LNRHMKCH+DVKR+LCT+CGKGFNDTFDLKRH RTHTG
Sbjct: 118 FTCHICQKAFTYQRMLNRHMKCHNDVKRHLCTYCGKGFNDTFDLKRHVRTHTG 170

Putative transcription factor. Involved in hair formation and spermatogenesis. May function in the differentiation and/or maintenance of the urogenital system.

Bos taurus (taxid: 9913)

>sp|Q9BRP0|OVOL2_HUMAN Transcription factor Ovo-like 2 OS=Homo sapiens GN=OVOL2 PE=1 SV=1

 Score =  100 bits (248), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 47/71 (66%), Positives = 55/71 (77%), Gaps = 1/71 (1%)

Query: 43  VEPEKVESTTGR-KDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTF 101
           V   K++ TTG   D+   +C LC K F LQR+LNRH+KCH+ VKR+LCTFCGKGFNDTF
Sbjct: 101 VARSKIKFTTGTCSDSVVHSCDLCGKGFRLQRMLNRHLKCHNQVKRHLCTFCGKGFNDTF 160

Query: 102 DLKRHTRTHTG 112
           DLKRH RTHTG
Sbjct: 161 DLKRHVRTHTG 171

DNA-binding protein that binds to the 5'-G[GCT]GGGGG-3' core sequence. Probably acts as a transcription regulator.

Homo sapiens (taxid: 9606)

>sp|O14753|OVOL1_HUMAN Putative transcription factor Ovo-like 1 OS=Homo sapiens GN=OVOL1 PE=2 SV=3

 Score = 99.4 bits (246), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 41/53 (77%), Positives = 48/53 (90%)

Query: 60  FACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
           F C +C K+F+ QR+LNRHMKCH+DVKR+LCT+CGKGFNDTFDLKRH RTHTG
Sbjct: 118 FTCRVCQKAFTYQRMLNRHMKCHNDVKRHLCTYCGKGFNDTFDLKRHVRTHTG 170

Putative transcription factor. Involved in hair formation and spermatogenesis. May function in the differentiation and/or maintenance of the urogenital system.

Homo sapiens (taxid: 9606)

>sp|O00110|OVOL3_HUMAN Putative transcription factor ovo-like protein 3 OS=Homo sapiens GN=OVOL3 PE=5 SV=3

 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 39/73 (53%), Positives = 49/73 (67%)

Query: 40  PTRVEPEKVESTTGRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFND 99
           P   +P +   T+  +      C LC K+F LQR+L RH+KCHS V+R+LC  CGKGF+D
Sbjct: 74  PWTAQPTQGNLTSAPRGPGTLGCPLCPKAFPLQRMLTRHLKCHSPVRRHLCRCCGKGFHD 133

Query: 100 TFDLKRHTRTHTG 112
            FDLKRH RTHTG
Sbjct: 134 AFDLKRHMRTHTG 146

May act as a transcription regulator.

Homo sapiens (taxid: 9606)

>sp|D3YYM0|OVOL3_MOUSE Putative transcription factor ovo-like protein 3 OS=Mus musculus GN=Ovol3 PE=5 SV=1

 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 38/74 (51%), Positives = 49/74 (66%)

Query: 39  PPTRVEPEKVESTTGRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFN 98
           P T  +  +   T+  K      C LC K+F LQR+L RH+KCHS  +R++C +CGKGF+
Sbjct: 96  PYTLWQSSQGTLTSAPKGPGTLGCPLCPKAFPLQRMLTRHLKCHSPARRHVCHYCGKGFH 155

Query: 99  DTFDLKRHTRTHTG 112
           D FDLKRH RTHTG
Sbjct: 156 DAFDLKRHMRTHTG 169

May act as a transcription regulator.

Mus musculus (taxid: 10090)

>sp|P53968|CRZ1_YEAST Transcriptional regulator CRZ1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CRZ1 PE=1 SV=1

 Score = 61.2 bits (147), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/70 (40%), Positives = 42/70 (60%), Gaps = 1/70 (1%)

Query: 46  EKVESTTG-RKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLK 104
           EK++S T  RK+   FAC +C K F+    L  H++ H++ + ++C+ CGK F    D K
Sbjct: 554 EKLDSVTNNRKNPANFACDVCGKKFTRPYNLKSHLRTHTNERPFICSICGKAFARQHDRK 613

Query: 105 RHTRTHTGKE 114
           RH   HTGK+
Sbjct: 614 RHEDLHTGKK 623

Involved in the regulation of calcium ion homeostasis. Binds to the calcineurin-dependent response element. Transcriptionally regulates PMC1, PMR1, PMR2A and FKS2.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|Q9Y2D9|ZN652_HUMAN Zinc finger protein 652 OS=Homo sapiens GN=ZNF652 PE=1 SV=3

 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 36/56 (64%)

Query: 59  RFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKE 114
           +F C  C K F++++  + HMK H+  K ++C  CGK F    ++KRH RTHTG++
Sbjct: 412 QFMCQWCGKDFNMKQYFDEHMKTHTGEKPFICEICGKSFTSRPNMKRHRRTHTGEK 467

Functions as a transcriptional repressor.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	134
328710378	938	PREDICTED: hypothetical protein LOC10016	0.813	0.116	0.610	8e-38
328710376	915	PREDICTED: hypothetical protein LOC10016	0.791	0.115	0.617	3e-37
270005966	892	hypothetical protein TcasGA2_TC008099 [T	0.776	0.116	0.675	1e-34
242005883	1080	zinc finger protein, putative [Pediculus	0.791	0.098	0.669	2e-34
91080971	839	PREDICTED: similar to AGAP000114-PA [Tri	0.768	0.122	0.672	3e-34
357623051	832	protein ovo [Danaus plexippus]	0.753	0.121	0.651	8e-34
290565750	806	protein ovo [Bombyx mori] gi|289585586|g	0.768	0.127	0.639	1e-33
332020806	938	Protein ovo [Acromyrmex echinatior]	0.776	0.110	0.663	2e-33
320580019	576	OVO protein [Bombyx mori]	0.753	0.175	0.651	2e-33
322783660	913	hypothetical protein SINV_01394 [Solenop	0.776	0.113	0.663	3e-33

>gi|328710378|ref|XP_003244246.1| PREDICTED: hypothetical protein LOC100161874 isoform 2 [Acyrthosiphon pisum]

 Score =  161 bits (407), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 80/131 (61%), Positives = 91/131 (69%), Gaps = 22/131 (16%)

Query: 1   MVILGLPKGVTLEFVNGGHGVKNPLANHDVSAIIPPPPPPTRV---EPEKV--------- 48
           M  LGLP  +  EFVNGGHG+KNPLANHD    +PPPPP   +   EPE+          
Sbjct: 717 MAKLGLPNDLPFEFVNGGHGIKNPLANHDT---LPPPPPSMLIRTPEPERSNTLVAPATI 773

Query: 49  -------ESTTGRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTF 101
                  E     K+ ++F C+LCSK+F+LQRLLNRHMKCHSDVKRYLCTFCGKGFNDTF
Sbjct: 774 VSVNSTPEPVETSKNGSKFCCNLCSKTFNLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTF 833

Query: 102 DLKRHTRTHTG 112
           DLKRHTRTHTG
Sbjct: 834 DLKRHTRTHTG 844

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328710376|ref|XP_001949580.2| PREDICTED: hypothetical protein LOC100161874 isoform 1 [Acyrthosiphon pisum]

 Score =  159 bits (403), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 79/128 (61%), Positives = 90/128 (70%), Gaps = 22/128 (17%)

Query: 4   LGLPKGVTLEFVNGGHGVKNPLANHDVSAIIPPPPPPTRV---EPEKV------------ 48
           LGLP  +  EFVNGGHG+KNPLANHD    +PPPPP   +   EPE+             
Sbjct: 697 LGLPNDLPFEFVNGGHGIKNPLANHDT---LPPPPPSMLIRTPEPERSNTLVAPATIVSV 753

Query: 49  ----ESTTGRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLK 104
               E     K+ ++F C+LCSK+F+LQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLK
Sbjct: 754 NSTPEPVETSKNGSKFCCNLCSKTFNLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLK 813

Query: 105 RHTRTHTG 112
           RHTRTHTG
Sbjct: 814 RHTRTHTG 821

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270005966|gb|EFA02414.1| hypothetical protein TcasGA2_TC008099 [Tribolium castaneum]

 Score =  151 bits (381), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 75/111 (67%), Positives = 82/111 (73%), Gaps = 7/111 (6%)

Query: 4   LGLPKGVTLEFVNGGHGVKNPLANHDVSAIIPPPPPPTRVEPE-KVESTTGRKDNTRFAC 62
           LGLP  V LEFVNGGHG+KNPLAN +            R E + KV S T     T F C
Sbjct: 672 LGLPSEVQLEFVNGGHGIKNPLANQETVR------QGARTEDKTKVASITTEDGQTNFCC 725

Query: 63  HLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGK 113
            +C+K+F+LQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGK
Sbjct: 726 RICNKTFALQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGK 776

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242005883|ref|XP_002423789.1| zinc finger protein, putative [Pediculus humanus corporis] gi|212507005|gb|EEB11051.1| zinc finger protein, putative [Pediculus humanus corporis]

 Score =  149 bits (377), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 75/112 (66%), Positives = 84/112 (75%), Gaps = 6/112 (5%)

Query: 4   LGLPKGVTLEFVNGGHGVKNPLANHDVSAIIPPPPP---PTRVEPEKVESTTGRKDNTRF 60
           LGL   V +EFVNGGHG+KNPLANH+    IP P       + +  K+  T      T+F
Sbjct: 873 LGLTGDVHIEFVNGGHGIKNPLANHEH---IPGPGRGHMDDKQKSNKIAITKKENGETKF 929

Query: 61  ACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
           +C +CSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG
Sbjct: 930 SCRVCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 981

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91080971|ref|XP_974881.1| PREDICTED: similar to AGAP000114-PA [Tribolium castaneum]

 Score =  149 bits (377), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 74/110 (67%), Positives = 81/110 (73%), Gaps = 7/110 (6%)

Query: 4   LGLPKGVTLEFVNGGHGVKNPLANHDVSAIIPPPPPPTRVEPE-KVESTTGRKDNTRFAC 62
           LGLP  V LEFVNGGHG+KNPLAN +            R E + KV S T     T F C
Sbjct: 639 LGLPSEVQLEFVNGGHGIKNPLANQETVR------QGARTEDKTKVASITTEDGQTNFCC 692

Query: 63  HLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
            +C+K+F+LQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG
Sbjct: 693 RICNKTFALQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 742

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357623051|gb|EHJ74355.1| protein ovo [Danaus plexippus]

 Score =  148 bits (373), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 71/109 (65%), Positives = 79/109 (72%), Gaps = 8/109 (7%)

Query: 4   LGLPKGVTLEFVNGGHGVKNPLANHDVSAIIPPPPPPTRVEPEKVESTTGRKDNTRFACH 63
           LGLP  + LEF+NGGHGVKNPLA    +          R E +  +      D T+F C 
Sbjct: 630 LGLPAELPLEFINGGHGVKNPLATEANAR--------QREEEKNKQVLVSEDDPTKFVCR 681

Query: 64  LCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
           +CSK+FSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG
Sbjct: 682 VCSKNFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 730

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|290565750|ref|NP_001166866.1| protein ovo [Bombyx mori] gi|289585586|gb|ADD11587.1| OVO [Bombyx mori]

 Score =  147 bits (372), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 71/111 (63%), Positives = 79/111 (71%), Gaps = 8/111 (7%)

Query: 2   VILGLPKGVTLEFVNGGHGVKNPLANHDVSAIIPPPPPPTRVEPEKVESTTGRKDNTRFA 61
             LGLP  + LEF+NGGHGVKNPLA    +          R E +  +      D T+F 
Sbjct: 602 AALGLPAELPLEFINGGHGVKNPLATEANAR--------QREEEKNKQVLVSEDDPTKFV 653

Query: 62  CHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
           C +CSK+FSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG
Sbjct: 654 CRVCSKNFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 704

Source: Bombyx mori

Species: Bombyx mori

Genus: Bombyx

Family: Bombycidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332020806|gb|EGI61204.1| Protein ovo [Acromyrmex echinatior]

 Score =  147 bits (371), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 73/110 (66%), Positives = 79/110 (71%), Gaps = 6/110 (5%)

Query: 4   LGLPKGVTLEFVNGGHGVKNPLANHDVSAIIPPPPPPTRVEPEKVESTTGRKDN-TRFAC 62
           LGLP    LEFVNGGHG+KNPLA              TR E     +  G+ D+  RF C
Sbjct: 721 LGLPSDCQLEFVNGGHGIKNPLAIEGQRQAAA-----TRDEERANRTPPGKDDDPNRFTC 775

Query: 63  HLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
            +CSK+FSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG
Sbjct: 776 RVCSKNFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 825

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|320580019|gb|ADW54424.1| OVO protein [Bombyx mori]

 Score =  147 bits (370), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 71/109 (65%), Positives = 79/109 (72%), Gaps = 8/109 (7%)

Query: 4   LGLPKGVTLEFVNGGHGVKNPLANHDVSAIIPPPPPPTRVEPEKVESTTGRKDNTRFACH 63
           LGLP  + LEF+NGGHGVKNPLA    +          R E +  +      D T+F C 
Sbjct: 374 LGLPAELPLEFINGGHGVKNPLATEANAR--------QREEEKNKQVLVSEDDPTKFVCR 425

Query: 64  LCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
           +CSK+FSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG
Sbjct: 426 VCSKNFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 474

Source: Bombyx mori

Species: Bombyx mori

Genus: Bombyx

Family: Bombycidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322783660|gb|EFZ10998.1| hypothetical protein SINV_01394 [Solenopsis invicta]

 Score =  146 bits (368), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 73/110 (66%), Positives = 79/110 (71%), Gaps = 6/110 (5%)

Query: 4   LGLPKGVTLEFVNGGHGVKNPLANHDVSAIIPPPPPPTRVEPEKVESTTGRKDN-TRFAC 62
           LGLP    LEFVNGGHG+KNPLA              TR E     +  G+ D+  RF C
Sbjct: 677 LGLPSDCQLEFVNGGHGIKNPLAIEGQRQATT-----TRDEERTNRTPPGKDDDPNRFTC 731

Query: 63  HLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
            +CSK+FSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG
Sbjct: 732 RVCSKNFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 781

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	134
FB|FBgn0003028	1351	ovo "ovo" [Drosophila melanoga	0.455	0.045	0.781	2.6e-31
WB|WBGene00003033	280	lin-48 [Caenorhabditis elegans	0.746	0.357	0.613	1.4e-30
RGD|1306956	267	Ovol1 "ovo-like 1(Drosophila)"	0.492	0.247	0.701	8.7e-24
MGI|MGI:1330290	267	Ovol1 "OVO homolog-like 1 (Dro	0.656	0.329	0.573	1.1e-23
MGI|MGI:1338039	274	Ovol2 "ovo-like 2 (Drosophila)	0.634	0.310	0.597	1.4e-23
RGD|1306130	274	Ovol2 "ovo-like 2 (Drosophila)	0.634	0.310	0.586	3.8e-23
UNIPROTKB|D4A5U5	241	Ovol2 "Zinc finger protein 339	0.634	0.352	0.586	3.8e-23
UNIPROTKB|F1RU16	267	OVOL1 "Uncharacterized protein	0.492	0.247	0.671	6.1e-23
UNIPROTKB|Q9BRP0	275	OVOL2 "Transcription factor Ov	0.522	0.254	0.661	6.1e-23
UNIPROTKB|A2VDT4	267	OVOL1 "Putative transcription	0.395	0.198	0.792	7.8e-23

FB|FBgn0003028 ovo "ovo" [Drosophila melanogaster (taxid:7227)]

 Score = 288 (106.4 bits), Expect = 2.6e-31, Sum P(2) = 2.6e-31
 Identities = 50/64 (78%), Positives = 57/64 (89%)

Query:    49 ESTTGRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTR 108
             +S++G   N +F C +C K+FSLQRLLNRHMKCHSD+KRYLCTFCGKGFNDTFDLKRHTR
Sbjct:  1189 DSSSG---NNKFVCRVCMKTFSLQRLLNRHMKCHSDIKRYLCTFCGKGFNDTFDLKRHTR 1245

Query:   109 THTG 112
             THTG
Sbjct:  1246 THTG 1249

GO:0048477 "oogenesis" evidence=TAS

GO:0018992 "germ-line sex determination" evidence=IGI;IMP

GO:0042810 "pheromone metabolic process" evidence=IMP

GO:0019099 "female germ-line sex determination" evidence=NAS

GO:0005634 "nucleus" evidence=IC;ISS;IDA;NAS

GO:0009913 "epidermal cell differentiation" evidence=IMP

GO:0003677 "DNA binding" evidence=IDA;TAS

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IMP

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IMP

GO:0042335 "cuticle development" evidence=TAS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0035316 "non-sensory hair organization" evidence=IMP;TAS

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IDA

GO:0048067 "cuticle pigmentation" evidence=IMP

GO:0035017 "cuticle pattern formation" evidence=IMP

GO:0008343 "adult feeding behavior" evidence=IMP

GO:0016348 "imaginal disc-derived leg joint morphogenesis" evidence=IMP

WB|WBGene00003033 lin-48 [Caenorhabditis elegans (taxid:6239)]

 Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
 Identities = 62/101 (61%), Positives = 74/101 (73%)

Query:    12 LEFVNGGHGVKNPLANHDVSAIIXXXXXXTRVEPEKVESTTGRKDNTRFACHLCSKSFSL 71
             +EFVNGG+GVKNPLA   +S+        + V P  + S++  +      CH+C K F L
Sbjct:    86 VEFVNGGYGVKNPLAPL-ISSFETTSIPCSTVSPSSLISSSKDEFQDSLTCHICGKKFGL 144

Query:    72 QRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
             QRLLNRH+KCHSD+KRYLCTFCGKGFNDTFDLKRHTRTHTG
Sbjct:   145 QRLLNRHIKCHSDLKRYLCTFCGKGFNDTFDLKRHTRTHTG 185

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0007442 "hindgut morphogenesis" evidence=IMP

GO:0045138 "tail tip morphogenesis" evidence=IMP

GO:0005634 "nucleus" evidence=IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

RGD|1306956 Ovol1 "ovo-like 1(Drosophila)" [Rattus norvegicus (taxid:10116)]

 Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
 Identities = 47/67 (70%), Positives = 55/67 (82%)

Query:    47 KVESTTGRKDN-TRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKR 105
             K++ T G   N   F CH+C KSF+ QR+LNRHMKCH+DVKR+LCT+CGKGFNDTFDLKR
Sbjct:   104 KMKVTLGDSPNGDLFTCHICQKSFTYQRMLNRHMKCHNDVKRHLCTYCGKGFNDTFDLKR 163

Query:   106 HTRTHTG 112
             H RTHTG
Sbjct:   164 HVRTHTG 170

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=ISO

GO:0000239 "pachytene" evidence=IEA;ISO

GO:0001078 "RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription" evidence=IEA;ISO

GO:0001822 "kidney development" evidence=IEA;ISO

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA;ISO

GO:0007283 "spermatogenesis" evidence=IEA;ISO

GO:0007498 "mesoderm development" evidence=IEA;ISO

GO:0008270 "zinc ion binding" evidence=IEA

GO:0008544 "epidermis development" evidence=ISO

GO:0043588 "skin development" evidence=IEA;ISO

MGI|MGI:1330290 Ovol1 "OVO homolog-like 1 (Drosophila)" [Mus musculus (taxid:10090)]

 Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
 Identities = 51/89 (57%), Positives = 61/89 (68%)

Query:    25 LANHDVSAIIXXXXXXTRVEPEKVESTTGRKDN-TRFACHLCSKSFSLQRLLNRHMKCHS 83
             L + DVS +             K++ T G   N   F CH+C KSF+ QR+LNRHMKCH+
Sbjct:    82 LPSEDVSHLTDPQSRDQGFLRTKMKVTLGDSPNGDLFTCHICQKSFTHQRMLNRHMKCHN 141

Query:    84 DVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
             DVKR+LCT+CGKGFNDTFDLKRH RTHTG
Sbjct:   142 DVKRHLCTYCGKGFNDTFDLKRHVRTHTG 170

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IDA

GO:0001078 "RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription" evidence=IDA

GO:0001822 "kidney development" evidence=IMP

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=TAS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0007283 "spermatogenesis" evidence=IMP

GO:0007498 "mesoderm development" evidence=IMP

GO:0008270 "zinc ion binding" evidence=IEA

GO:0008544 "epidermis development" evidence=IMP

GO:0043588 "skin development" evidence=IMP

GO:0046872 "metal ion binding" evidence=IEA

GO:0051729 "germline cell cycle switching, mitotic to meiotic cell cycle" evidence=IMP

GO:1901994 "negative regulation of meiotic cell cycle phase transition" evidence=IMP

MGI|MGI:1338039 Ovol2 "ovo-like 2 (Drosophila)" [Mus musculus (taxid:10090)]

 Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
 Identities = 52/87 (59%), Positives = 59/87 (67%)

Query:    28 HDVSAIIXXXXXXTR-VEPEKVESTTGRKDNTRFA-CHLCSKSFSLQRLLNRHMKCHSDV 85
             HD            R V   K++ TTG  DN+    C LC KSF LQR+LNRH+KCH+ V
Sbjct:    84 HDAQGTDGHLAAMQRPVARSKIKFTTGTCDNSVIHNCDLCGKSFRLQRMLNRHLKCHNQV 143

Query:    86 KRYLCTFCGKGFNDTFDLKRHTRTHTG 112
             KR+LCTFCGKGFNDTFDLKRH RTHTG
Sbjct:   144 KRHLCTFCGKGFNDTFDLKRHVRTHTG 170

GO:0000981 "sequence-specific DNA binding RNA polymerase II transcription factor activity" evidence=IBA

GO:0001525 "angiogenesis" evidence=IMP

GO:0001755 "neural crest cell migration" evidence=IMP

GO:0001842 "neural fold formation" evidence=IMP

GO:0001947 "heart looping" evidence=IMP

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=ISS

GO:0007507 "heart development" evidence=IMP

GO:0008270 "zinc ion binding" evidence=IEA

GO:0008285 "negative regulation of cell proliferation" evidence=IMP

GO:0009953 "dorsal/ventral pattern formation" evidence=IMP

GO:0010837 "regulation of keratinocyte proliferation" evidence=ISO;IMP

GO:0010944 "negative regulation of transcription by competitive promoter binding" evidence=ISO

GO:0044212 "transcription regulatory region DNA binding" evidence=ISO

GO:0045617 "negative regulation of keratinocyte differentiation" evidence=ISO

GO:0045746 "negative regulation of Notch signaling pathway" evidence=ISO

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0046872 "metal ion binding" evidence=IEA

GO:0048557 "embryonic digestive tract morphogenesis" evidence=IMP

GO:0051726 "regulation of cell cycle" evidence=ISO

GO:0060214 "endocardium formation" evidence=IMP

GO:0060347 "heart trabecula formation" evidence=IMP

GO:0060716 "labyrinthine layer blood vessel development" evidence=IMP

RGD|1306130 Ovol2 "ovo-like 2 (Drosophila)" [Rattus norvegicus (taxid:10116)]

 Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
 Identities = 51/87 (58%), Positives = 58/87 (66%)

Query:    28 HDVSAIIXXXXXXTR-VEPEKVESTTGR-KDNTRFACHLCSKSFSLQRLLNRHMKCHSDV 85
             HD            R V   K++ TTG   D+    C LC KSF LQR+LNRH+KCH+ V
Sbjct:    84 HDAEGTDGHLAAMQRPVARSKIKFTTGTCNDSVIHNCDLCGKSFRLQRMLNRHLKCHNQV 143

Query:    86 KRYLCTFCGKGFNDTFDLKRHTRTHTG 112
             KR+LCTFCGKGFNDTFDLKRH RTHTG
Sbjct:   144 KRHLCTFCGKGFNDTFDLKRHVRTHTG 170

GO:0001525 "angiogenesis" evidence=ISO

GO:0001755 "neural crest cell migration" evidence=ISO

GO:0001842 "neural fold formation" evidence=ISO

GO:0001947 "heart looping" evidence=ISO

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0003677 "DNA binding" evidence=ISO

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISO

GO:0007507 "heart development" evidence=ISO

GO:0008270 "zinc ion binding" evidence=IEA

GO:0008285 "negative regulation of cell proliferation" evidence=ISO

GO:0009953 "dorsal/ventral pattern formation" evidence=ISO

GO:0010837 "regulation of keratinocyte proliferation" evidence=ISO

GO:0010944 "negative regulation of transcription by competitive promoter binding" evidence=ISO

GO:0044212 "transcription regulatory region DNA binding" evidence=ISO

GO:0045617 "negative regulation of keratinocyte differentiation" evidence=ISO

GO:0045746 "negative regulation of Notch signaling pathway" evidence=ISO

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=ISO

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=ISO

GO:0048557 "embryonic digestive tract morphogenesis" evidence=ISO

GO:0051726 "regulation of cell cycle" evidence=ISO

GO:0060214 "endocardium formation" evidence=ISO

GO:0060347 "heart trabecula formation" evidence=ISO

GO:0060716 "labyrinthine layer blood vessel development" evidence=ISO

UNIPROTKB|D4A5U5 Ovol2 "Zinc finger protein 339 (Predicted), isoform CRA_b" [Rattus norvegicus (taxid:10116)]

 Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
 Identities = 51/87 (58%), Positives = 58/87 (66%)

Query:    28 HDVSAIIXXXXXXTR-VEPEKVESTTGR-KDNTRFACHLCSKSFSLQRLLNRHMKCHSDV 85
             HD            R V   K++ TTG   D+    C LC KSF LQR+LNRH+KCH+ V
Sbjct:    51 HDAEGTDGHLAAMQRPVARSKIKFTTGTCNDSVIHNCDLCGKSFRLQRMLNRHLKCHNQV 110

Query:    86 KRYLCTFCGKGFNDTFDLKRHTRTHTG 112
             KR+LCTFCGKGFNDTFDLKRH RTHTG
Sbjct:   111 KRHLCTFCGKGFNDTFDLKRHVRTHTG 137

GO:0001525 "angiogenesis" evidence=IEA

GO:0001755 "neural crest cell migration" evidence=IEA

GO:0001842 "neural fold formation" evidence=IEA

GO:0001947 "heart looping" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0008285 "negative regulation of cell proliferation" evidence=IEA

GO:0009953 "dorsal/ventral pattern formation" evidence=IEA

GO:0010837 "regulation of keratinocyte proliferation" evidence=IEA

GO:0010944 "negative regulation of transcription by competitive promoter binding" evidence=IEA

GO:0044212 "transcription regulatory region DNA binding" evidence=IEA

GO:0045617 "negative regulation of keratinocyte differentiation" evidence=IEA

GO:0045746 "negative regulation of Notch signaling pathway" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0048557 "embryonic digestive tract morphogenesis" evidence=IEA

GO:0051726 "regulation of cell cycle" evidence=IEA

GO:0060214 "endocardium formation" evidence=IEA

GO:0060347 "heart trabecula formation" evidence=IEA

GO:0060716 "labyrinthine layer blood vessel development" evidence=IEA

UNIPROTKB|F1RU16 OVOL1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
 Identities = 45/67 (67%), Positives = 55/67 (82%)

Query:    47 KVESTTGRKDN-TRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKR 105
             K++ T G   +   F CH+C K+F+ QR+LNRHMKCH+DVKR+LCT+CGKGFNDTFDLKR
Sbjct:   104 KMKVTLGDSPSGDLFTCHICQKAFTYQRMLNRHMKCHNDVKRHLCTYCGKGFNDTFDLKR 163

Query:   106 HTRTHTG 112
             H RTHTG
Sbjct:   164 HVRTHTG 170

GO:0043588 "skin development" evidence=IEA

GO:0007498 "mesoderm development" evidence=IEA

GO:0007283 "spermatogenesis" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0001822 "kidney development" evidence=IEA

GO:0001078 "RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription" evidence=IEA

GO:0000239 "pachytene" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|Q9BRP0 OVOL2 "Transcription factor Ovo-like 2" [Homo sapiens (taxid:9606)]

 Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
 Identities = 47/71 (66%), Positives = 55/71 (77%)

Query:    43 VEPEKVESTTGR-KDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTF 101
             V   K++ TTG   D+   +C LC K F LQR+LNRH+KCH+ VKR+LCTFCGKGFNDTF
Sbjct:   101 VARSKIKFTTGTCSDSVVHSCDLCGKGFRLQRMLNRHLKCHNQVKRHLCTFCGKGFNDTF 160

Query:   102 DLKRHTRTHTG 112
             DLKRH RTHTG
Sbjct:   161 DLKRHVRTHTG 171

GO:0008270 "zinc ion binding" evidence=IEA

GO:0001525 "angiogenesis" evidence=IEA

GO:0001755 "neural crest cell migration" evidence=IEA

GO:0001842 "neural fold formation" evidence=IEA

GO:0001947 "heart looping" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0008285 "negative regulation of cell proliferation" evidence=IEA

GO:0009953 "dorsal/ventral pattern formation" evidence=IEA

GO:0010837 "regulation of keratinocyte proliferation" evidence=IEA;IMP

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0048557 "embryonic digestive tract morphogenesis" evidence=IEA

GO:0060214 "endocardium formation" evidence=IEA

GO:0060347 "heart trabecula formation" evidence=IEA

GO:0060716 "labyrinthine layer blood vessel development" evidence=IEA

GO:0000981 "sequence-specific DNA binding RNA polymerase II transcription factor activity" evidence=IBA

GO:0005634 "nucleus" evidence=IC;IBA

GO:0051726 "regulation of cell cycle" evidence=IMP

GO:0044212 "transcription regulatory region DNA binding" evidence=IDA

GO:0010944 "negative regulation of transcription by competitive promoter binding" evidence=IDA

GO:0045617 "negative regulation of keratinocyte differentiation" evidence=IMP

GO:0045746 "negative regulation of Notch signaling pathway" evidence=IDA

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=IBA

GO:0006366 "transcription from RNA polymerase II promoter" evidence=IBA

UNIPROTKB|A2VDT4 OVOL1 "Putative transcription factor Ovo-like 1" [Bos taurus (taxid:9913)]

 Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
 Identities = 42/53 (79%), Positives = 49/53 (92%)

Query:    60 FACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
             F CH+C K+F+ QR+LNRHMKCH+DVKR+LCT+CGKGFNDTFDLKRH RTHTG
Sbjct:   118 FTCHICQKAFTYQRMLNRHMKCHNDVKRHLCTYCGKGFNDTFDLKRHVRTHTG 170

GO:0005634 "nucleus" evidence=IEA

GO:0043588 "skin development" evidence=IEA

GO:0007498 "mesoderm development" evidence=IEA

GO:0007283 "spermatogenesis" evidence=IEA

GO:0001822 "kidney development" evidence=IEA

GO:0001078 "RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription" evidence=IEA

GO:0000239 "pachytene" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9BRP0	OVOL2_HUMAN	No assigned EC number	0.6619	0.5223	0.2545	yes	N/A
Q9WTJ2	OVOL1_MOUSE	No assigned EC number	0.5555	0.7313	0.3670	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	134
pfam13465	26	pfam13465, zf-H2C2_2, Zinc-finger double domain	0.001

>gnl|CDD|222150 pfam13465, zf-H2C2_2, Zinc-finger double domain

 Score = 34.3 bits (79), Expect = 0.001
 Identities = 12/24 (50%), Positives = 15/24 (62%)

Query: 75 LNRHMKCHSDVKRYLCTFCGKGFN 98
          L RHM+ H+  K Y C  CGK F+
Sbjct: 2  LRRHMRTHTGEKPYKCPVCGKSFS 25

Length = 26

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	134
KOG2462|consensus	279		99.85
KOG2462|consensus	279		99.77
KOG3576|consensus	267		99.76
KOG3623|consensus	1007		99.75
KOG3623|consensus	1007		99.59
KOG3576|consensus	267		99.39
PHA02768	55	hypothetical protein; Provisional	99.36
PHA02768	55	hypothetical protein; Provisional	99.31
KOG1074|consensus	958		99.22
KOG3608|consensus	467		99.19
KOG1074|consensus	958		99.18
PHA00733	128	hypothetical protein	99.06
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	99.05
PHA00733	128	hypothetical protein	98.99
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.98
KOG3608|consensus	467		98.93
PHA00616	44	hypothetical protein	98.89
PLN03086	567	PRLI-interacting factor K; Provisional	98.84
PHA00616	44	hypothetical protein	98.81
PHA00732	79	hypothetical protein	98.7
PLN03086	567	PRLI-interacting factor K; Provisional	98.68
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.5
COG5189	423	SFP1 Putative transcriptional repressor regulating	98.37
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.34
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.29
KOG3993|consensus	500		98.28
PHA00732	79	hypothetical protein	98.23
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	98.03
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.99
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.97
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.89
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.81
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.79
KOG3993|consensus	500		97.75
PRK04860	160	hypothetical protein; Provisional	97.72
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.7
PRK04860	160	hypothetical protein; Provisional	97.48
smart00355	26	ZnF_C2H2 zinc finger.	97.48
smart00355	26	ZnF_C2H2 zinc finger.	97.48
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	97.36
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.26
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	97.05
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.97
COG5048	467	FOG: Zn-finger [General function prediction only]	96.91
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.9
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	96.61
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.53
KOG2893|consensus	341		96.36
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.33
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	95.68
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	95.6
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	95.12
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	94.17
KOG2186|consensus	276		93.78
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	93.58
KOG1146|consensus	1406		93.43
COG4049	65	Uncharacterized protein containing archaeal-type C	92.94
KOG4167|consensus	907		90.74
PF05443	132	ROS_MUCR: ROS/MUCR transcriptional regulator prote	90.52
KOG2893|consensus	341		90.4
KOG2785|consensus	390		89.87
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	89.74
KOG2482|consensus	423		89.41
COG5048	467	FOG: Zn-finger [General function prediction only]	89.0
PF05443	132	ROS_MUCR: ROS/MUCR transcriptional regulator prote	88.38
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	87.9
PF13719	37	zinc_ribbon_5: zinc-ribbon domain	87.23
TIGR02098	38	MJ0042_CXXC MJ0042 family finger-like domain. This	87.18
COG4049	65	Uncharacterized protein containing archaeal-type C	86.77
KOG4173|consensus	253		86.34
KOG1146|consensus	1406		86.25
PF02892	45	zf-BED: BED zinc finger; InterPro: IPR003656 Zinc	86.04
KOG2186|consensus	276		85.73
smart00614	50	ZnF_BED BED zinc finger. DNA-binding domain in chr	85.61
KOG4173|consensus	253		85.49
PF04959	214	ARS2: Arsenite-resistance protein 2; InterPro: IPR	85.38
COG4957	148	Predicted transcriptional regulator [Transcription	85.25
PF04959	214	ARS2: Arsenite-resistance protein 2; InterPro: IPR	85.1
PRK09678	72	DNA-binding transcriptional regulator; Provisional	85.09
KOG2785|consensus	390		84.49
COG1592	166	Rubrerythrin [Energy production and conversion]	84.34
smart00659	44	RPOLCX RNA polymerase subunit CX. present in RNA p	84.09
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	84.06
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	83.58
PF13717	36	zinc_ribbon_4: zinc-ribbon domain	83.39
TIGR02300	129	FYDLN_acid conserved hypothetical protein TIGR0230	82.83
PF05290	140	Baculo_IE-1: Baculovirus immediate-early protein (	81.81
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	81.55
PRK06266	178	transcription initiation factor E subunit alpha; V	80.7
COG5236	493	Uncharacterized conserved protein, contains RING Z	80.58
PRK00398	46	rpoP DNA-directed RNA polymerase subunit P; Provis	80.56

>KOG2462|consensus

Probab=99.85  E-value=8.6e-23  Score=135.80  Aligned_cols=74  Identities=30%  Similarity=0.601  Sum_probs=67.9

Q ss_pred             ceeccccccccCChHHHHHHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccCCCcccCcccee
Q psy691           59 RFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDGKTNVLTTEYLV  132 (134)
Q Consensus        59 ~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~~~~~~l~  132 (134)
                      +++|.+|||.|.+.=.|+.|+|+|+|||||.|..|+|.|..+++|+.||++|.+.|+|.|.-|++.|-...+|.
T Consensus       187 ~c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLn  260 (279)
T KOG2462|consen  187 PCECGICGKAFSRPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLN  260 (279)
T ss_pred             CcccccccccccchHHhhcccccccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHH
Confidence            68899999999999999999999999999999999999999999999999999999999998988888777663

>KOG2462|consensus

Probab=99.77  E-value=1.2e-19  Score=120.90  Aligned_cols=74  Identities=27%  Similarity=0.508  Sum_probs=66.4

Q ss_pred             CCceeccccccccCChHHHHHHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccCCCcccCcccee
Q psy691           57 NTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDGKTNVLTTEYLV  132 (134)
Q Consensus        57 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~~~~~~l~  132 (134)
                      .+.+.|++|+|.|.+-..|+.|+++|+  -+++|.+|||.|.+..-|+-|+|+|||||||.|..|.+.|-.+++|+
T Consensus       159 ~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLR  232 (279)
T KOG2462|consen  159 KKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLR  232 (279)
T ss_pred             cccccCCCCCceeeehHHHhhHhhccC--CCcccccccccccchHHhhcccccccCCCCccCCcccchhcchHHHH
Confidence            556778888888888888888888886  67999999999999999999999999999999999999999998885

>KOG3576|consensus

Probab=99.76  E-value=2.4e-19  Score=114.84  Aligned_cols=78  Identities=59%  Similarity=0.996  Sum_probs=73.2

Q ss_pred             CCCCCceeccccccccCChHHHHHHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccCCCcccCccce
Q psy691           54 RKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDGKTNVLTTEYL  131 (134)
Q Consensus        54 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~~~~~~l  131 (134)
                      ......|.|.+|+|.|.....|.+|++-|...+.|.|.+|||.|.....|++|+|+|+|-+||+|..|++.|+.+..|
T Consensus       112 ssd~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsl  189 (267)
T KOG3576|consen  112 SSDQDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSL  189 (267)
T ss_pred             CCCCCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccH
Confidence            344667999999999999999999999999999999999999999999999999999999999999999999988766

>KOG3623|consensus

Probab=99.75  E-value=4.5e-19  Score=130.88  Aligned_cols=82  Identities=26%  Similarity=0.506  Sum_probs=75.3

Q ss_pred             ccCCCCCCCceeccccccccCChHHHHHHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccCCCcccCcc
Q psy691           50 STTGRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDGKTNVLTTE  129 (134)
Q Consensus        50 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~~~~~  129 (134)
                      .......+..|.|+.|.|.|.....|.+|..-|+|.+||+|.+|.|.|+.+.+|..|+|.|.|||||.|+.|.++|.++-
T Consensus       885 tk~~kte~gmyaCDqCDK~FqKqSSLaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCdKClKRFSHSG  964 (1007)
T KOG3623|consen  885 TKHAKTEDGMYACDQCDKAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCDKCLKRFSHSG  964 (1007)
T ss_pred             cccccCccccchHHHHHHHHHhhHHHHHhhhhhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCcchhhhhhhhccccc
Confidence            33456677899999999999999999999999999999999999999999999999999999999999999999998875


Q ss_pred             ce
Q psy691          130 YL  131 (134)
Q Consensus       130 ~l  131 (134)
                      ..
T Consensus       965 SY  966 (1007)
T KOG3623|consen  965 SY  966 (1007)
T ss_pred             ch
Confidence            43

>KOG3623|consensus

Probab=99.59  E-value=4.8e-16  Score=115.14  Aligned_cols=76  Identities=33%  Similarity=0.630  Sum_probs=68.2

Q ss_pred             CCceeccccccccCChHHHHHHHHHcCC-------------CCceecccccccccChhhHHHHHhHhcCCCccccccCCC
Q psy691           57 NTRFACHLCSKSFSLQRLLNRHMKCHSD-------------VKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDGKT  123 (134)
Q Consensus        57 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~-------------~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~  123 (134)
                      ..-|.|..|.++|..+..|.+||.+|..             .+.|+|..|+|.|+.+.+|+.|+|+|.|||||.|+-|++
T Consensus       238 e~nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtECgKAFKfKHHLKEHlRIHSGEKPfeCpnCkK  317 (1007)
T KOG3623|consen  238 EPNFSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTECGKAFKFKHHLKEHLRIHSGEKPFECPNCKK  317 (1007)
T ss_pred             CCCCcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccccccchhhhhHHHHHhhheeecCCCCcCCccccc
Confidence            3458999999999999999999999843             257999999999999999999999999999999999999


Q ss_pred             cccCcccee
Q psy691          124 NVLTTEYLV  132 (134)
Q Consensus       124 ~~~~~~~l~  132 (134)
                      +|.++-..+
T Consensus       318 RFSHSGSyS  326 (1007)
T KOG3623|consen  318 RFSHSGSYS  326 (1007)
T ss_pred             ccccCCccc
Confidence            998876544

>KOG3576|consensus

Probab=99.39  E-value=7.6e-14  Score=89.78  Aligned_cols=74  Identities=28%  Similarity=0.503  Sum_probs=62.8

Q ss_pred             CCCCceeccccccccCChHHHHHHHHHcCCCCceecccccccccChhhHHHHHhHhcC-----------CCccccccCCC
Q psy691           55 KDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG-----------KEEEEEEDGKT  123 (134)
Q Consensus        55 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~-----------~~~~~c~~~~~  123 (134)
                      ...+.|-|..||+.|.....|++|+|+|+|.+||+|..|+|.|.++-+|..|.+.-+|           +|-|.|+.|++
T Consensus       141 ~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~kvhgv~~~yaykerr~kl~vcedcg~  220 (267)
T KOG3576|consen  141 SDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLKKVHGVQHQYAYKERRAKLYVCEDCGY  220 (267)
T ss_pred             cHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHHHHcCchHHHHHHHhhhheeeecccCC
Confidence            4456789999999999999999999999999999999999999999999999775333           35588988887


Q ss_pred             cccCc
Q psy691          124 NVLTT  128 (134)
Q Consensus       124 ~~~~~  128 (134)
                      .-.+.
T Consensus       221 t~~~~  225 (267)
T KOG3576|consen  221 TSERP  225 (267)
T ss_pred             CCCCh
Confidence            65443

>PHA02768 hypothetical protein; Provisional

Probab=99.36  E-value=4.5e-13  Score=69.10  Aligned_cols=42  Identities=14%  Similarity=0.366  Sum_probs=21.9

Q ss_pred             eeccccccccCChHHHHHHHHHcCCCCceecccccccccChhhH
Q psy691           60 FACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDL  103 (134)
Q Consensus        60 ~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l  103 (134)
                      |.|++||+.|....+|..|+++|+  ++|+|..|++.|.+.+.|
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEY   47 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceeccccee
Confidence            455555555555555555555554  445555555555544443

>PHA02768 hypothetical protein; Provisional

Probab=99.31  E-value=1.1e-12  Score=67.63  Aligned_cols=46  Identities=22%  Similarity=0.369  Sum_probs=42.6

Q ss_pred             ceecccccccccChhhHHHHHhHhcCCCccccccCCCcccCccceeeC
Q psy691           87 RYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDGKTNVLTTEYLVVV  134 (134)
Q Consensus        87 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~~~~~~l~~~  134 (134)
                      -|.|+.||+.|.+.++|..|+++|+  ++|+|..|++.|...+.|++|
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~~~   50 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEYIEI   50 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceecccceeEEE
Confidence            4899999999999999999999998  799999999999999988864

>KOG1074|consensus

Probab=99.22  E-value=9.8e-12  Score=93.84  Aligned_cols=74  Identities=22%  Similarity=0.432  Sum_probs=64.7

Q ss_pred             CCCCceeccccccccCChHHHHHHHHHcCCCCceecccccccccChhhHHHHHhHhcCCC----ccccc---cCCCcccC
Q psy691           55 KDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKE----EEEEE---DGKTNVLT  127 (134)
Q Consensus        55 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~----~~~c~---~~~~~~~~  127 (134)
                      +...+..|.+|.+...-+..|+.|.|+|+|+|||+|.+|++.|.++.+|+.|+-+|-..-    ++.|+   .|-.-|.+
T Consensus       601 ~~TdPNqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn  680 (958)
T KOG1074|consen  601 KRTDPNQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTN  680 (958)
T ss_pred             ccCCccceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhcccccc
Confidence            344568999999999999999999999999999999999999999999999999997653    47787   77777765


Q ss_pred             c
Q psy691          128 T  128 (134)
Q Consensus       128 ~  128 (134)
                      .
T Consensus       681 ~  681 (958)
T KOG1074|consen  681 A  681 (958)
T ss_pred             c
Confidence            4

>KOG3608|consensus

Probab=99.19  E-value=4.7e-12  Score=87.60  Aligned_cols=75  Identities=24%  Similarity=0.484  Sum_probs=63.8

Q ss_pred             CCCceeccccccccCChHHHHHHHHHcCCCCceecccccccccChhhHHHHHhH-hcCCCccccccCCCcccCcccee
Q psy691           56 DNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRT-HTGKEEEEEEDGKTNVLTTEYLV  132 (134)
Q Consensus        56 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~c~~~~~~~~~~~~l~  132 (134)
                      ..++|.|..|.|.|.....|..|+..|.  .-|+|+.|+......+.|.+|++. |..+|||+|++|.+.|++-..|.
T Consensus       234 ~~n~fqC~~C~KrFaTeklL~~Hv~rHv--n~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~  309 (467)
T KOG3608|consen  234 NTNSFQCAQCFKRFATEKLLKSHVVRHV--NCYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLA  309 (467)
T ss_pred             cCCchHHHHHHHHHhHHHHHHHHHHHhh--hcccccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHH
Confidence            3457888888888888888888888885  448999999999999999999997 88899999999999998876653

>KOG1074|consensus

Probab=99.18  E-value=1.1e-11  Score=93.57  Aligned_cols=57  Identities=28%  Similarity=0.640  Sum_probs=52.5

Q ss_pred             CceeccccccccCChHHHHHHHHHcCCCCceecccccccccChhhHHHHHhHhcCCC
Q psy691           58 TRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKE  114 (134)
Q Consensus        58 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~  114 (134)
                      -+++|.+|.|.|.....|+.|.|+|+|++||+|.+||.+|.++.+|+.|...|+.+-
T Consensus       352 ~khkCr~CakvfgS~SaLqiHlRSHTGERPfqCnvCG~~FSTkGNLKvH~~rH~e~~  408 (958)
T KOG1074|consen  352 FKHKCRFCAKVFGSDSALQIHLRSHTGERPFQCNVCGNRFSTKGNLKVHFQRHREKY  408 (958)
T ss_pred             ccchhhhhHhhcCchhhhhhhhhccCCCCCeeecccccccccccceeeeeeeccccC
Confidence            357899999999999999999999999999999999999999999999988776543

>PHA00733 hypothetical protein

Probab=99.06  E-value=5.8e-11  Score=72.81  Aligned_cols=75  Identities=17%  Similarity=0.283  Sum_probs=50.3

Q ss_pred             CCCCceeccccccccCChHHHHHH--HH---HcCCCCceecccccccccChhhHHHHHhHhcCCCccccccCCCcccCcc
Q psy691           55 KDNTRFACHLCSKSFSLQRLLNRH--MK---CHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDGKTNVLTTE  129 (134)
Q Consensus        55 ~~~~~~~C~~C~~~f~~~~~l~~H--~~---~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~~~~~  129 (134)
                      ..++++.|.+|.+.|.....|..+  +.   .+.+.+||.|..|++.|.....|..|++.|  +.+|.|..|++.|.+..
T Consensus        36 ~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~  113 (128)
T PHA00733         36 PEQKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTD  113 (128)
T ss_pred             hhhhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHH
Confidence            345567777777777766665554  11   233466788888888888888887777765  34677777777777665


Q ss_pred             ce
Q psy691          130 YL  131 (134)
Q Consensus       130 ~l  131 (134)
                      .|
T Consensus       114 sL  115 (128)
T PHA00733        114 ST  115 (128)
T ss_pred             HH
Confidence            54

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=99.05  E-value=1.5e-10  Score=51.39  Aligned_cols=25  Identities=48%  Similarity=1.046  Sum_probs=15.6

Q ss_pred             HHHHHHHHcCCCCceeccccccccc
Q psy691           74 LLNRHMKCHSDVKRYLCTFCGKGFN   98 (134)
Q Consensus        74 ~l~~H~~~h~~~k~~~C~~C~~~f~   98 (134)
                      +|.+|+++|++++||.|+.|++.|.
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEES
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeC
Confidence            3556666666666666666666664

...

>PHA00733 hypothetical protein

Probab=98.99  E-value=7.1e-10  Score=68.01  Aligned_cols=56  Identities=27%  Similarity=0.527  Sum_probs=50.4

Q ss_pred             CCCCceeccccccccCChHHHHHHHHHcCCCCceecccccccccChhhHHHHHhHhcC
Q psy691           55 KDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG  112 (134)
Q Consensus        55 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~  112 (134)
                      ...++|.|+.|++.|.....|..|++.|  ..+|.|..|++.|.....|.+|+...++
T Consensus        69 ~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733         69 KAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             CCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHHHHHHHHHHhcC
Confidence            3467899999999999999999999987  4579999999999999999999988765

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.98  E-value=3e-10  Score=50.42  Aligned_cols=26  Identities=31%  Similarity=0.409  Sum_probs=23.6

Q ss_pred             hHHHHHhHhcCCCccccccCCCcccC
Q psy691          102 DLKRHTRTHTGKEEEEEEDGKTNVLT  127 (134)
Q Consensus       102 ~l~~H~~~h~~~~~~~c~~~~~~~~~  127 (134)
                      +|.+|+++|+|++||.|+.|++.|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            58899999999999999999998864

...

>KOG3608|consensus

Probab=98.93  E-value=6e-10  Score=77.39  Aligned_cols=79  Identities=18%  Similarity=0.293  Sum_probs=66.1

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceeccc--ccccccChhhHHHHHhHhc-CCC--ccccccCCCcccC
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTF--CGKGFNDTFDLKRHTRTHT-GKE--EEEEEDGKTNVLT  127 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~--C~~~f~~~~~l~~H~~~h~-~~~--~~~c~~~~~~~~~  127 (134)
                      .+..+++|+|+.|.+.+.+...|.+|...|. +..|.|..  |..+|.+...+.+|++-++ |..  +|.|-+|+++|++
T Consensus       286 rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS-~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~~Y~CH~Cdr~ft~  364 (467)
T KOG3608|consen  286 RHSKDKPFKCDECDTRCVRESDLAKHVQVHS-KTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPILYACHCCDRFFTS  364 (467)
T ss_pred             hhccCCCccccchhhhhccHHHHHHHHHhcc-ccceecCCCCCcHHHHHHHHHHHHHHHhccCCCCCceeeecchhhhcc
Confidence            3445788999999999999999999999887 66799988  9999999999999988744 654  5999999999999


Q ss_pred             cccee
Q psy691          128 TEYLV  132 (134)
Q Consensus       128 ~~~l~  132 (134)
                      -..|.
T Consensus       365 G~~L~  369 (467)
T KOG3608|consen  365 GKSLS  369 (467)
T ss_pred             chhHH
Confidence            87764

>PHA00616 hypothetical protein

Probab=98.89  E-value=7.6e-10  Score=54.52  Aligned_cols=32  Identities=13%  Similarity=0.324  Sum_probs=15.6

Q ss_pred             eeccccccccCChHHHHHHHHHcCCCCceecc
Q psy691           60 FACHLCSKSFSLQRLLNRHMKCHSDVKRYLCT   91 (134)
Q Consensus        60 ~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~   91 (134)
                      |.|..||+.|..+..|..|++.|++++++.|+
T Consensus         2 YqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~   33 (44)
T PHA00616          2 YQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLE   33 (44)
T ss_pred             CccchhhHHHhhHHHHHHHHHHhcCCCcccee
Confidence            44444554444444444444444444444444

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.84  E-value=4.4e-09  Score=78.08  Aligned_cols=67  Identities=18%  Similarity=0.332  Sum_probs=54.8

Q ss_pred             CCCCceeccccccccCChHHHHHHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccCCCccc
Q psy691           55 KDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDGKTNVL  126 (134)
Q Consensus        55 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~~  126 (134)
                      ..++.+.|+.|++.|. ...|..|+..|+  +++.|. |++.+ .+..|..|+.+|..++++.|..|+..|.
T Consensus       449 el~~H~~C~~Cgk~f~-~s~LekH~~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~  515 (567)
T PLN03086        449 EAKNHVHCEKCGQAFQ-QGEMEKHMKVFH--EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQ  515 (567)
T ss_pred             ccccCccCCCCCCccc-hHHHHHHHHhcC--CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccc
Confidence            3455678999999986 677899999875  789998 98755 6688999998999999999998888774

>PHA00616 hypothetical protein

Probab=98.81  E-value=2.2e-09  Score=52.86  Aligned_cols=33  Identities=21%  Similarity=0.340  Sum_probs=31.7

Q ss_pred             ceecccccccccChhhHHHHHhHhcCCCccccc
Q psy691           87 RYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEE  119 (134)
Q Consensus        87 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~  119 (134)
                      ||+|..||+.|.....|.+|++.|+|++++.|+
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~   33 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLE   33 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCcccee
Confidence            689999999999999999999999999999986

>PHA00732 hypothetical protein

Probab=98.70  E-value=1.3e-08  Score=57.17  Aligned_cols=48  Identities=23%  Similarity=0.505  Sum_probs=40.2

Q ss_pred             ceeccccccccCChHHHHHHHHH-cCCCCceecccccccccChhhHHHHHhHhcC
Q psy691           59 RFACHLCSKSFSLQRLLNRHMKC-HSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG  112 (134)
Q Consensus        59 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~  112 (134)
                      +|.|..|++.|.....|..|++. |.   ++.|..|++.|.   .+..|.+++..
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~---~l~~H~~~~~~   49 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT---LTKCPVCNKSYR---RLNQHFYSQYD   49 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC---CCccCCCCCEeC---ChhhhhcccCC
Confidence            58899999999999999999985 65   358999999998   58888866543

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.68  E-value=2.2e-08  Score=74.46  Aligned_cols=69  Identities=16%  Similarity=0.366  Sum_probs=59.3

Q ss_pred             CceeccccccccCChHHHHHHHHHcCCCCceecccccccccC----------hhhHHHHHhHhcCCCccccccCCCcccC
Q psy691           58 TRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFND----------TFDLKRHTRTHTGKEEEEEEDGKTNVLT  127 (134)
Q Consensus        58 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~----------~~~l~~H~~~h~~~~~~~c~~~~~~~~~  127 (134)
                      .++.|+ |++.+ .+..|..|+..|...+++.|.+|++.|..          ...|..|...+ |.+++.|..|++.|.-
T Consensus       477 kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~C-G~rt~~C~~Cgk~Vrl  553 (567)
T PLN03086        477 EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESIC-GSRTAPCDSCGRSVML  553 (567)
T ss_pred             CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHhc-CCcceEccccCCeeee
Confidence            578999 99766 56899999999999999999999999852          35899999885 9999999988888876


Q ss_pred             cc
Q psy691          128 TE  129 (134)
Q Consensus       128 ~~  129 (134)
                      ++
T Consensus       554 rd  555 (567)
T PLN03086        554 KE  555 (567)
T ss_pred             hh
Confidence            65

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.50  E-value=2.7e-07  Score=48.16  Aligned_cols=51  Identities=25%  Similarity=0.501  Sum_probs=40.7

Q ss_pred             ceeccccccccCChHHHHHHHHH-cCCC-CceecccccccccChhhHHHHHhHhcC
Q psy691           59 RFACHLCSKSFSLQRLLNRHMKC-HSDV-KRYLCTFCGKGFNDTFDLKRHTRTHTG  112 (134)
Q Consensus        59 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~-k~~~C~~C~~~f~~~~~l~~H~~~h~~  112 (134)
                      .|.|++|++. .+...|..|... |..+ +.+.|++|...+.  .+|..|+..+++
T Consensus         2 ~f~CP~C~~~-~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H~   54 (54)
T PF05605_consen    2 SFTCPYCGKG-FSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQHR   54 (54)
T ss_pred             CcCCCCCCCc-cCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhcC
Confidence            5899999995 557889999876 6654 5799999998655  489999988654

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=98.37  E-value=4.1e-07  Score=62.76  Aligned_cols=54  Identities=31%  Similarity=0.630  Sum_probs=46.3

Q ss_pred             CCCceeccc--cccccCChHHHHHHHHH-cC------------------CCCceecccccccccChhhHHHHHhH
Q psy691           56 DNTRFACHL--CSKSFSLQRLLNRHMKC-HS------------------DVKRYLCTFCGKGFNDTFDLKRHTRT  109 (134)
Q Consensus        56 ~~~~~~C~~--C~~~f~~~~~l~~H~~~-h~------------------~~k~~~C~~C~~~f~~~~~l~~H~~~  109 (134)
                      ..++|+|++  |.|.++....|+.|+.- |-                  ..|||.|++|+|+++....|+.|+..
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~H  420 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRKH  420 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceecccc
Confidence            358999998  99999999999999874 41                  13899999999999999999998764

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.34  E-value=4.4e-07  Score=38.84  Aligned_cols=22  Identities=45%  Similarity=0.922  Sum_probs=12.0

Q ss_pred             eeccccccccCChHHHHHHHHH
Q psy691           60 FACHLCSKSFSLQRLLNRHMKC   81 (134)
Q Consensus        60 ~~C~~C~~~f~~~~~l~~H~~~   81 (134)
                      |.|++|++.|.....|..|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            4455555555555555555554

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.29  E-value=5.5e-07  Score=38.52  Aligned_cols=23  Identities=52%  Similarity=1.096  Sum_probs=21.6

Q ss_pred             eecccccccccChhhHHHHHhHh
Q psy691           88 YLCTFCGKGFNDTFDLKRHTRTH  110 (134)
Q Consensus        88 ~~C~~C~~~f~~~~~l~~H~~~h  110 (134)
                      |.|..|++.|.....|.+|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            78999999999999999999875

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>KOG3993|consensus

Probab=98.28  E-value=3.9e-07  Score=64.97  Aligned_cols=53  Identities=32%  Similarity=0.600  Sum_probs=46.6

Q ss_pred             eeccccccccCChHHHHHHHHHcCC--------C-------------------------CceecccccccccChhhHHHH
Q psy691           60 FACHLCSKSFSLQRLLNRHMKCHSD--------V-------------------------KRYLCTFCGKGFNDTFDLKRH  106 (134)
Q Consensus        60 ~~C~~C~~~f~~~~~l~~H~~~h~~--------~-------------------------k~~~C~~C~~~f~~~~~l~~H  106 (134)
                      |+|++|+|.|.-..||..|.|.|--        .                         -.|.|..|+|.|.+...|+.|
T Consensus       296 YrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~rsg~dss~gi~~C~~C~KkFrRqAYLrKH  375 (500)
T KOG3993|consen  296 YRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAERSGDDSSSGIFSCHTCGKKFRRQAYLRKH  375 (500)
T ss_pred             ecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhccccCCcccCceeecHHhhhhhHHHHHHHHh
Confidence            8999999999999999999999821        1                         148999999999999999999


Q ss_pred             HhHhcC
Q psy691          107 TRTHTG  112 (134)
Q Consensus       107 ~~~h~~  112 (134)
                      +-+|+.
T Consensus       376 qlthq~  381 (500)
T KOG3993|consen  376 QLTHQR  381 (500)
T ss_pred             HHhhhc
Confidence            888764

>PHA00732 hypothetical protein

Probab=98.23  E-value=7.8e-07  Score=49.95  Aligned_cols=39  Identities=26%  Similarity=0.362  Sum_probs=33.3

Q ss_pred             ceecccccccccChhhHHHHHhH-hcCCCccccccCCCcccCc
Q psy691           87 RYLCTFCGKGFNDTFDLKRHTRT-HTGKEEEEEEDGKTNVLTT  128 (134)
Q Consensus        87 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~c~~~~~~~~~~  128 (134)
                      ||.|..|++.|.....|..|++. |++   +.|+.|++.|.+.
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~---~~C~~CgKsF~~l   40 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTL---TKCPVCNKSYRRL   40 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCC---CccCCCCCEeCCh
Confidence            58999999999999999999985 653   5899898888753

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=98.03  E-value=3.3e-06  Score=37.51  Aligned_cols=25  Identities=36%  Similarity=0.775  Sum_probs=14.7

Q ss_pred             ceecccccccccChhhHHHHHhHhc
Q psy691           87 RYLCTFCGKGFNDTFDLKRHTRTHT  111 (134)
Q Consensus        87 ~~~C~~C~~~f~~~~~l~~H~~~h~  111 (134)
                      +|.|..|++.|.....|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            3556666666666666666665553

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.99  E-value=5.8e-06  Score=35.36  Aligned_cols=22  Identities=41%  Similarity=0.890  Sum_probs=10.4

Q ss_pred             eeccccccccCChHHHHHHHHH
Q psy691           60 FACHLCSKSFSLQRLLNRHMKC   81 (134)
Q Consensus        60 ~~C~~C~~~f~~~~~l~~H~~~   81 (134)
                      |.|++|++.|.....|..|++.
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~   22 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRT   22 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHh
Confidence            3455555555555555555544

...

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.97  E-value=8.5e-06  Score=34.82  Aligned_cols=24  Identities=42%  Similarity=1.000  Sum_probs=20.3

Q ss_pred             eecccccccccChhhHHHHHhHhc
Q psy691           88 YLCTFCGKGFNDTFDLKRHTRTHT  111 (134)
Q Consensus        88 ~~C~~C~~~f~~~~~l~~H~~~h~  111 (134)
                      |.|.+|++.|.....|..|++.|+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            689999999999999999999874

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.89  E-value=9.4e-06  Score=35.99  Aligned_cols=25  Identities=36%  Similarity=0.721  Sum_probs=23.1

Q ss_pred             ceeccccccccCChHHHHHHHHHcC
Q psy691           59 RFACHLCSKSFSLQRLLNRHMKCHS   83 (134)
Q Consensus        59 ~~~C~~C~~~f~~~~~l~~H~~~h~   83 (134)
                      +|.|..|++.|.....|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            5899999999999999999998875

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.81  E-value=4.7e-05  Score=38.48  Aligned_cols=30  Identities=23%  Similarity=0.428  Sum_probs=14.2

Q ss_pred             CCceeccccccccCChHHHHHHHHHcCCCC
Q psy691           57 NTRFACHLCSKSFSLQRLLNRHMKCHSDVK   86 (134)
Q Consensus        57 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   86 (134)
                      +.+..|++|+..+....+|++|+..+++.|
T Consensus        22 ~~PatCP~C~a~~~~srnLrRHle~~H~~k   51 (54)
T PF09237_consen   22 EQPATCPICGAVIRQSRNLRRHLEIRHFKK   51 (54)
T ss_dssp             S--EE-TTT--EESSHHHHHHHHHHHTTTS
T ss_pred             CCCCCCCcchhhccchhhHHHHHHHHhccc
Confidence            344556666666666666666665544444

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.79  E-value=1.7e-05  Score=46.21  Aligned_cols=50  Identities=32%  Similarity=0.654  Sum_probs=21.5

Q ss_pred             eccccccccCChHHHHHHHHHcCCC-----------------------CceecccccccccChhhHHHHHhHh
Q psy691           61 ACHLCSKSFSLQRLLNRHMKCHSDV-----------------------KRYLCTFCGKGFNDTFDLKRHTRTH  110 (134)
Q Consensus        61 ~C~~C~~~f~~~~~l~~H~~~h~~~-----------------------k~~~C~~C~~~f~~~~~l~~H~~~h  110 (134)
                      .|.+|+..|.....|..|+...++.                       ..+.|.+|++.|.....|..|++.+
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIPDQKYLVDPNRLLNYLRKKVKESFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             ------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             CccccccccccccccccccccccccccccccccccccccccccccccCCCCCCCccCCCCcCHHHHHHHHcCc
Confidence            4889999999999999998753221                       2489999999999999999999974

>KOG3993|consensus

Probab=97.75  E-value=2.1e-06  Score=61.36  Aligned_cols=73  Identities=22%  Similarity=0.306  Sum_probs=60.3

Q ss_pred             eeccccccccCChHHHHHHHHHcCCCCceecccccccccChhhHHHHHhHhcC--------C------------------
Q psy691           60 FACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG--------K------------------  113 (134)
Q Consensus        60 ~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~--------~------------------  113 (134)
                      |.|..|-..|.....|.+|.....-..-|+|..|+|.|.-..+|..|+|.|--        .                  
T Consensus       268 yiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~r  347 (500)
T KOG3993|consen  268 YICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAER  347 (500)
T ss_pred             HHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhccc
Confidence            89999999999999999998654444569999999999999999999987741        1                  


Q ss_pred             -------CccccccCCCcccCcccee
Q psy691          114 -------EEEEEEDGKTNVLTTEYLV  132 (134)
Q Consensus       114 -------~~~~c~~~~~~~~~~~~l~  132 (134)
                             --|.|..|.+.|.+..+|.
T Consensus       348 sg~dss~gi~~C~~C~KkFrRqAYLr  373 (500)
T KOG3993|consen  348 SGDDSSSGIFSCHTCGKKFRRQAYLR  373 (500)
T ss_pred             cCCcccCceeecHHhhhhhHHHHHHH
Confidence                   1278988888888887764

>PRK04860 hypothetical protein; Provisional

Probab=97.72  E-value=2.1e-05  Score=50.02  Aligned_cols=38  Identities=18%  Similarity=0.423  Sum_probs=24.3

Q ss_pred             ceecccccccccChhhHHHHHhHhcCCCccccccCCCcccCc
Q psy691           87 RYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDGKTNVLTT  128 (134)
Q Consensus        87 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~~~~  128 (134)
                      +|.|. |++   ....+.+|.++|+++++|.|..|+..|...
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~  156 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFK  156 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEe
Confidence            46666 665   455666777777777777776666665543

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.70  E-value=4.6e-05  Score=38.53  Aligned_cols=39  Identities=21%  Similarity=0.382  Sum_probs=25.8

Q ss_pred             HHHHH-cCCCCceecccccccccChhhHHHHHhHhcCCCc
Q psy691           77 RHMKC-HSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEE  115 (134)
Q Consensus        77 ~H~~~-h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  115 (134)
                      .+.+. +..+.|..|++|+..+.+..+|++|+.++++.||
T Consensus        13 ~~~k~~~~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   13 KKPKSKSQSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             ---CCCCTTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             hHHHHhhccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            34433 3457899999999999999999999999888776

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PRK04860 hypothetical protein; Provisional

Probab=97.48  E-value=6.7e-05  Score=47.77  Aligned_cols=40  Identities=23%  Similarity=0.440  Sum_probs=34.7

Q ss_pred             CceeccccccccCChHHHHHHHHHcCCCCceecccccccccChh
Q psy691           58 TRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTF  101 (134)
Q Consensus        58 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~  101 (134)
                      -+|.|. |++   ....+.+|.++|.++++|.|..|+..|....
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~~  157 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFKG  157 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEec
Confidence            479998 997   5678899999999999999999999887643

>smart00355 ZnF_C2H2 zinc finger

Probab=97.48  E-value=9.3e-05  Score=31.93  Aligned_cols=22  Identities=36%  Similarity=0.756  Sum_probs=11.0

Q ss_pred             eccccccccCChHHHHHHHHHc
Q psy691           61 ACHLCSKSFSLQRLLNRHMKCH   82 (134)
Q Consensus        61 ~C~~C~~~f~~~~~l~~H~~~h   82 (134)
                      .|..|++.|.....|..|++.|
T Consensus         2 ~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        2 RCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCcchhCCHHHHHHHHHHh
Confidence            4455555555555555555443

>smart00355 ZnF_C2H2 zinc finger

Probab=97.48  E-value=0.00013  Score=31.48  Aligned_cols=25  Identities=48%  Similarity=0.778  Sum_probs=22.2

Q ss_pred             eecccccccccChhhHHHHHhHhcC
Q psy691           88 YLCTFCGKGFNDTFDLKRHTRTHTG  112 (134)
Q Consensus        88 ~~C~~C~~~f~~~~~l~~H~~~h~~  112 (134)
                      |.|..|++.|.....|..|++.|..
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~~   25 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHXX   25 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhcc
Confidence            5799999999999999999997753

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=97.36  E-value=0.00013  Score=31.58  Aligned_cols=22  Identities=41%  Similarity=0.934  Sum_probs=13.5

Q ss_pred             eeccccccccCChHHHHHHHHH
Q psy691           60 FACHLCSKSFSLQRLLNRHMKC   81 (134)
Q Consensus        60 ~~C~~C~~~f~~~~~l~~H~~~   81 (134)
                      |.|.+|++.|.+...|..|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            4566666666666666666553

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.26  E-value=0.00017  Score=50.16  Aligned_cols=46  Identities=24%  Similarity=0.333  Sum_probs=37.4

Q ss_pred             CCCceeccc--ccccccChhhHHHHHhH-hc------------------CCCccccccCCCcccCcc
Q psy691           84 DVKRYLCTF--CGKGFNDTFDLKRHTRT-HT------------------GKEEEEEEDGKTNVLTTE  129 (134)
Q Consensus        84 ~~k~~~C~~--C~~~f~~~~~l~~H~~~-h~------------------~~~~~~c~~~~~~~~~~~  129 (134)
                      ++|||+|++  |.|.++....|+.|+.. |.                  ..|||.|+.|.+....-+
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlN  412 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLN  412 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCc
Confidence            359999998  99999999999999875 31                  238999998988776544

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=97.05  E-value=0.00046  Score=29.76  Aligned_cols=23  Identities=30%  Similarity=0.847  Sum_probs=21.0

Q ss_pred             eecccccccccChhhHHHHHhHh
Q psy691           88 YLCTFCGKGFNDTFDLKRHTRTH  110 (134)
Q Consensus        88 ~~C~~C~~~f~~~~~l~~H~~~h  110 (134)
                      |.|.+|++.|.....|..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            67999999999999999998864

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.97  E-value=0.00065  Score=29.03  Aligned_cols=21  Identities=43%  Similarity=0.708  Sum_probs=9.9

Q ss_pred             eeccccccccCChHHHHHHHHH
Q psy691           60 FACHLCSKSFSLQRLLNRHMKC   81 (134)
Q Consensus        60 ~~C~~C~~~f~~~~~l~~H~~~   81 (134)
                      |.|+.|+.... +..|..|++.
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~   21 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKR   21 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHh
Confidence            34555555554 5555555554

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=96.91  E-value=0.0007  Score=48.96  Aligned_cols=62  Identities=35%  Similarity=0.567  Sum_probs=58.0

Q ss_pred             CceeccccccccCChHHHHHHHH--HcCCC--Cceecc--cccccccChhhHHHHHhHhcCCCccccc
Q psy691           58 TRFACHLCSKSFSLQRLLNRHMK--CHSDV--KRYLCT--FCGKGFNDTFDLKRHTRTHTGKEEEEEE  119 (134)
Q Consensus        58 ~~~~C~~C~~~f~~~~~l~~H~~--~h~~~--k~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~c~  119 (134)
                      .++.|..|...|.....|..|.+  .|.++  +++.|.  .|++.|.+...+.+|...|++.+++.+.
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  355 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEK  355 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCccccc
Confidence            46899999999999999999999  79999  999999  7999999999999999999999888874

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.90  E-value=0.00085  Score=28.66  Aligned_cols=24  Identities=33%  Similarity=0.678  Sum_probs=19.0

Q ss_pred             eecccccccccChhhHHHHHhHhcC
Q psy691           88 YLCTFCGKGFNDTFDLKRHTRTHTG  112 (134)
Q Consensus        88 ~~C~~C~~~f~~~~~l~~H~~~h~~  112 (134)
                      |+|..|+.... ...|.+|++.|++
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H~   24 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHHP   24 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHHS
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhCc
Confidence            68999998887 8899999998754

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=96.61  E-value=0.0019  Score=33.52  Aligned_cols=39  Identities=23%  Similarity=0.447  Sum_probs=29.8

Q ss_pred             ceecccccccccChhhHHHHHhH-hcCC-CccccccCCCccc
Q psy691           87 RYLCTFCGKGFNDTFDLKRHTRT-HTGK-EEEEEEDGKTNVL  126 (134)
Q Consensus        87 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~-~~~~c~~~~~~~~  126 (134)
                      .|.|++|++. .....|..|... |..+ +.+.|+.|...+.
T Consensus         2 ~f~CP~C~~~-~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~   42 (54)
T PF05605_consen    2 SFTCPYCGKG-FSESSLVEHCEDEHRSESKNVVCPICSSRVT   42 (54)
T ss_pred             CcCCCCCCCc-cCHHHHHHHHHhHCcCCCCCccCCCchhhhh
Confidence            4899999994 556789999777 5554 5699998887544

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.53  E-value=0.00049  Score=30.37  Aligned_cols=21  Identities=48%  Similarity=0.890  Sum_probs=11.2

Q ss_pred             eeccccccccCChHHHHHHHH
Q psy691           60 FACHLCSKSFSLQRLLNRHMK   80 (134)
Q Consensus        60 ~~C~~C~~~f~~~~~l~~H~~   80 (134)
                      |.|..|++.|.....|..|++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~   22 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMK   22 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTT
T ss_pred             CCcccCCCCcCCHHHHHHHHc
Confidence            445555555555555555443

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>KOG2893|consensus

Probab=96.36  E-value=0.002  Score=43.31  Aligned_cols=48  Identities=25%  Similarity=0.544  Sum_probs=36.5

Q ss_pred             CCCCCceeccccccccCChHHHHHHHHHcCCCCceecccccccccChhhHHHH
Q psy691           54 RKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRH  106 (134)
Q Consensus        54 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H  106 (134)
                      ++..++|. =+|++.|....-|..|++    .|.|+|.+|.|....-..|..|
T Consensus         6 kk~~kpwc-wycnrefddekiliqhqk----akhfkchichkkl~sgpglsih   53 (341)
T KOG2893|consen    6 KKVDKPWC-WYCNREFDDEKILIQHQK----AKHFKCHICHKKLFSGPGLSIH   53 (341)
T ss_pred             cccCCcee-eecccccchhhhhhhhhh----hccceeeeehhhhccCCCceee
Confidence            34455654 479999999999998887    4569999999776666666666

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.33  E-value=0.00096  Score=29.42  Aligned_cols=22  Identities=32%  Similarity=0.750  Sum_probs=20.2

Q ss_pred             eecccccccccChhhHHHHHhH
Q psy691           88 YLCTFCGKGFNDTFDLKRHTRT  109 (134)
Q Consensus        88 ~~C~~C~~~f~~~~~l~~H~~~  109 (134)
                      |-|..|++.|.....+..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            7899999999999999999875

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=95.68  E-value=0.0085  Score=25.90  Aligned_cols=18  Identities=28%  Similarity=0.833  Sum_probs=9.1

Q ss_pred             eccccccccCChHHHHHHH
Q psy691           61 ACHLCSKSFSLQRLLNRHM   79 (134)
Q Consensus        61 ~C~~C~~~f~~~~~l~~H~   79 (134)
                      .|+.|++.|. ...|..|+
T Consensus         4 ~C~~CgR~F~-~~~l~~H~   21 (25)
T PF13913_consen    4 PCPICGRKFN-PDRLEKHE   21 (25)
T ss_pred             cCCCCCCEEC-HHHHHHHH
Confidence            4555555552 44455554

>smart00451 ZnF_U1 U1-like zinc finger

Probab=95.60  E-value=0.013  Score=27.24  Aligned_cols=23  Identities=30%  Similarity=0.665  Sum_probs=15.4

Q ss_pred             ceeccccccccCChHHHHHHHHH
Q psy691           59 RFACHLCSKSFSLQRLLNRHMKC   81 (134)
Q Consensus        59 ~~~C~~C~~~f~~~~~l~~H~~~   81 (134)
                      +|.|.+|++.|.....+..|+..
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            46677777777766666666653

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>smart00451 ZnF_U1 U1-like zinc finger

Probab=95.12  E-value=0.017  Score=26.77  Aligned_cols=23  Identities=22%  Similarity=0.712  Sum_probs=20.7

Q ss_pred             ceecccccccccChhhHHHHHhH
Q psy691           87 RYLCTFCGKGFNDTFDLKRHTRT  109 (134)
Q Consensus        87 ~~~C~~C~~~f~~~~~l~~H~~~  109 (134)
                      +|.|.+|++.|.....+..|++.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            58899999999999999999775

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=94.17  E-value=0.055  Score=31.14  Aligned_cols=24  Identities=33%  Similarity=0.804  Sum_probs=21.6

Q ss_pred             ceeccccccccCChHHHHHHHHHc
Q psy691           59 RFACHLCSKSFSLQRLLNRHMKCH   82 (134)
Q Consensus        59 ~~~C~~C~~~f~~~~~l~~H~~~h   82 (134)
                      .+.|.+|++.|.+...|..|++.+
T Consensus        50 ~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen   50 SFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             SEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             CCCCCccCCCCcCHHHHHHHHcCc
Confidence            699999999999999999999975

>KOG2186|consensus

Probab=93.78  E-value=0.04  Score=37.45  Aligned_cols=48  Identities=29%  Similarity=0.677  Sum_probs=38.9

Q ss_pred             ceeccccccccCChHHHHHHHHHcCCCCceecccccccccChhhHHHHHhH
Q psy691           59 RFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRT  109 (134)
Q Consensus        59 ~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~  109 (134)
                      .|.|..||.... +..+.+|+..-++ .-|.|.-|++.|.+ ..+..|..-
T Consensus         3 ~FtCnvCgEsvK-Kp~vekH~srCrn-~~fSCIDC~k~F~~-~sYknH~kC   50 (276)
T KOG2186|consen    3 FFTCNVCGESVK-KPQVEKHMSRCRN-AYFSCIDCGKTFER-VSYKNHTKC   50 (276)
T ss_pred             EEehhhhhhhcc-ccchHHHHHhccC-CeeEEeeccccccc-chhhhhhhh
Confidence            488999998877 5567889988776 56999999999998 677778654

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=93.58  E-value=0.043  Score=25.35  Aligned_cols=24  Identities=21%  Similarity=0.870  Sum_probs=14.8

Q ss_pred             eeccccccccCChHHHHHHHHHcCCCCceecccccc
Q psy691           60 FACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGK   95 (134)
Q Consensus        60 ~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~   95 (134)
                      |.|.+||..+....            .++.|+.|+.
T Consensus         2 ~~C~~CGy~y~~~~------------~~~~CP~Cg~   25 (33)
T cd00350           2 YVCPVCGYIYDGEE------------APWVCPVCGA   25 (33)
T ss_pred             EECCCCCCEECCCc------------CCCcCcCCCC
Confidence            66777776654322            5567777763

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>KOG1146|consensus

Probab=93.43  E-value=0.052  Score=44.80  Aligned_cols=53  Identities=25%  Similarity=0.492  Sum_probs=45.4

Q ss_pred             CCceeccccccccCChHHHHHHHHH-cCC------------------------CCceecccccccccChhhHHHHHhH
Q psy691           57 NTRFACHLCSKSFSLQRLLNRHMKC-HSD------------------------VKRYLCTFCGKGFNDTFDLKRHTRT  109 (134)
Q Consensus        57 ~~~~~C~~C~~~f~~~~~l~~H~~~-h~~------------------------~k~~~C~~C~~~f~~~~~l~~H~~~  109 (134)
                      .+.+.|+.|+..|+....|..|||. |..                        .++|.|..|.-.+..+.+|.+|+..
T Consensus       463 ~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~~C~~C~~stttng~LsihlqS  540 (1406)
T KOG1146|consen  463 FKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPYPCRACNYSTTTNGNLSIHLQS  540 (1406)
T ss_pred             cccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcccceeeeeeeecchHHHHHHHH
Confidence            4678999999999999999999998 311                        2589999999999999999999875

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=92.94  E-value=0.056  Score=27.96  Aligned_cols=31  Identities=19%  Similarity=0.369  Sum_probs=24.4

Q ss_pred             cCCCCCCCceeccccccccCChHHHHHHHHH
Q psy691           51 TTGRKDNTRFACHLCSKSFSLQRLLNRHMKC   81 (134)
Q Consensus        51 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~   81 (134)
                      ...+.++.-+.|+-|+..|.....+.+|...
T Consensus         9 v~~RDGE~~lrCPRC~~~FR~~K~Y~RHVNK   39 (65)
T COG4049           9 VRDRDGEEFLRCPRCGMVFRRRKDYIRHVNK   39 (65)
T ss_pred             eeccCCceeeeCCchhHHHHHhHHHHHHhhH
Confidence            3455667778899999999988888888764

>KOG4167|consensus

Probab=90.74  E-value=0.28  Score=38.45  Aligned_cols=30  Identities=33%  Similarity=0.545  Sum_probs=25.4

Q ss_pred             CCCCceeccccccccCChHHHHHHHHHcCC
Q psy691           55 KDNTRFACHLCSKSFSLQRLLNRHMKCHSD   84 (134)
Q Consensus        55 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   84 (134)
                      ....-|.|.+|+|.|.....+..||++|.-
T Consensus       788 ~~~giFpCreC~kvF~KiKSrNAHMK~Hr~  817 (907)
T KOG4167|consen  788 DPTGIFPCRECGKVFFKIKSRNAHMKTHRQ  817 (907)
T ss_pred             CCCceeehHHHHHHHHHHhhhhHHHHHHHH
Confidence            345679999999999998999999999853

>PF05443 ROS_MUCR: ROS/MUCR transcriptional regulator protein; InterPro: IPR008807 This family consists of several ROS/MUCR transcriptional regulator proteins

Probab=90.52  E-value=0.18  Score=31.22  Aligned_cols=25  Identities=32%  Similarity=0.725  Sum_probs=14.6

Q ss_pred             CceeccccccccCChHHHHHHHHHcCCC
Q psy691           58 TRFACHLCSKSFSLQRLLNRHMKCHSDV   85 (134)
Q Consensus        58 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~   85 (134)
                      ..-.|-+||+.|+   .|++|++.|+|-
T Consensus        71 d~i~clecGk~~k---~LkrHL~~~~gl   95 (132)
T PF05443_consen   71 DYIICLECGKKFK---TLKRHLRTHHGL   95 (132)
T ss_dssp             S-EE-TBT--EES---BHHHHHHHTT-S
T ss_pred             CeeEEccCCcccc---hHHHHHHHccCC
Confidence            3467888888887   358888888665

The ros chromosomal gene is present in octopine and nopaline strains of Agrobacterium tumefaciens as well as in Rhizobium meliloti (Sinorhizobium meliloti). This gene encodes a 15.5 kDa protein that specifically represses the virC and virD operons in the virulence region of the Ti plasmid [] and is necessary for succinoglycan production []. S. meliloti can produce two types of acidic exopolysaccharides, succinoglycan and galactoglucan, that are interchangeable for infection of Medicago sativa (Alfalfa) nodules. MucR from S. meliloti acts as a transcriptional repressor that blocks the expression of the exp genes responsible for galactoglucan production therefore allowing the exclusive production of succinoglycan [].; GO: 0003677 DNA binding, 0008270 zinc ion binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2JSP_A.

>KOG2893|consensus

Probab=90.40  E-value=0.17  Score=34.32  Aligned_cols=39  Identities=18%  Similarity=0.354  Sum_probs=30.2

Q ss_pred             ecccccccccChhhHHHHHhHhcCCCccccccCCCcccCccce
Q psy691           89 LCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDGKTNVLTTEYL  131 (134)
Q Consensus        89 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~~~~~~l  131 (134)
                      .|.+|++.|.....|.+|++.    |-|+|..|.+..++---|
T Consensus        12 wcwycnrefddekiliqhqka----khfkchichkkl~sgpgl   50 (341)
T KOG2893|consen   12 WCWYCNREFDDEKILIQHQKA----KHFKCHICHKKLFSGPGL   50 (341)
T ss_pred             eeeecccccchhhhhhhhhhh----ccceeeeehhhhccCCCc
Confidence            599999999999999998875    458998776665554433

>KOG2785|consensus

Probab=89.87  E-value=0.52  Score=34.11  Aligned_cols=53  Identities=21%  Similarity=0.405  Sum_probs=44.6

Q ss_pred             CCceeccccccccCChHHHHHHHHHcCCC-----------------------Cceeccccc---ccccChhhHHHHHhH
Q psy691           57 NTRFACHLCSKSFSLQRLLNRHMKCHSDV-----------------------KRYLCTFCG---KGFNDTFDLKRHTRT  109 (134)
Q Consensus        57 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~-----------------------k~~~C~~C~---~~f~~~~~l~~H~~~  109 (134)
                      ..|-.|-.|++.+..-..-..||..+++-                       .-|.|.+|+   +.|......+.||..
T Consensus       164 ~~Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~HM~~  242 (390)
T KOG2785|consen  164 LIPTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAHMRD  242 (390)
T ss_pred             cCCcceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHHHhh
Confidence            34568999999999988888899987662                       358999999   999999999999885

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=89.74  E-value=0.2  Score=29.85  Aligned_cols=30  Identities=27%  Similarity=0.607  Sum_probs=24.1

Q ss_pred             eeccccccccCChHHHHHHHHHcCCCCceecccccccccCh
Q psy691           60 FACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDT  100 (134)
Q Consensus        60 ~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~  100 (134)
                      ..|+.||+.|..   |        +..|..|+.||..|...
T Consensus        10 R~Cp~CG~kFYD---L--------nk~PivCP~CG~~~~~~   39 (108)
T PF09538_consen   10 RTCPSCGAKFYD---L--------NKDPIVCPKCGTEFPPE   39 (108)
T ss_pred             ccCCCCcchhcc---C--------CCCCccCCCCCCccCcc
Confidence            589999999863   3        35788999999988876

The function of members of this family is unknown.

>KOG2482|consensus

Probab=89.41  E-value=0.59  Score=33.45  Aligned_cols=51  Identities=27%  Similarity=0.609  Sum_probs=41.1

Q ss_pred             ceeccccccccCChHHHHHHHHH--cCCC---------------------------------------------------
Q psy691           59 RFACHLCSKSFSLQRLLNRHMKC--HSDV---------------------------------------------------   85 (134)
Q Consensus        59 ~~~C~~C~~~f~~~~~l~~H~~~--h~~~---------------------------------------------------   85 (134)
                      .+.|-.|.+.|..+..|+.||+.  |...                                                   
T Consensus       195 r~~CLyCekifrdkntLkeHMrkK~HrrinPknreYDkfyiINY~ev~ks~t~~~~e~dret~~d~~E~D~~wsDw~ed~  274 (423)
T KOG2482|consen  195 RLRCLYCEKIFRDKNTLKEHMRKKRHRRINPKNREYDKFYIINYLEVGKSWTIVHSEDDRETNEDINETDDTWSDWNEDD  274 (423)
T ss_pred             hheeeeeccccCCcHHHHHHHHhccCcccCCCccccceEEEEeHhhcCCccchhhhhhhhhhhccccccccchhhhhcCC
Confidence            48999999999999999999985  4110                                                   


Q ss_pred             -Cc--eecccccccccChhhHHHHHhH
Q psy691           86 -KR--YLCTFCGKGFNDTFDLKRHTRT  109 (134)
Q Consensus        86 -k~--~~C~~C~~~f~~~~~l~~H~~~  109 (134)
                       .+  ..|.+|.........|..||++
T Consensus       275 a~a~~v~CLfC~~~~en~~~l~eHmk~  301 (423)
T KOG2482|consen  275 AEALSVVCLFCTNFYENPVFLFEHMKI  301 (423)
T ss_pred             CCccceEEEeeccchhhHHHHHHHHHH
Confidence             12  4888998888888889899886

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=89.00  E-value=0.4  Score=34.68  Aligned_cols=62  Identities=32%  Similarity=0.641  Sum_probs=53.4

Q ss_pred             CCCceeccccccccCChHHHHHHHHHcCCCCceeccc--ccccccChhhHHHHHhHhcCCCccc
Q psy691           56 DNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTF--CGKGFNDTFDLKRHTRTHTGKEEEE  117 (134)
Q Consensus        56 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~  117 (134)
                      ....+.|+.|...|....+...|.+.|.+++++.|..  |...|.....+.+|.+.++......
T Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (467)
T COG5048          30 APRPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSYSGCDKSFSRPLELSRHLRTHHNNPSDL   93 (467)
T ss_pred             CCchhhcccccccccccchhhhhcccccccCCccccccccccccCCcchhhhhccccccccccc
Confidence            3456899999999999999999999999999999987  7788999999999988877655433

>PF05443 ROS_MUCR: ROS/MUCR transcriptional regulator protein; InterPro: IPR008807 This family consists of several ROS/MUCR transcriptional regulator proteins

Probab=88.38  E-value=0.51  Score=29.22  Aligned_cols=28  Identities=46%  Similarity=0.794  Sum_probs=18.3

Q ss_pred             CCceecccccccccChhhHHHHHhHhcCCCc
Q psy691           85 VKRYLCTFCGKGFNDTFDLKRHTRTHTGKEE  115 (134)
Q Consensus        85 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  115 (134)
                      ..-..|..||+.|..   |.+|.+.|+|-.|
T Consensus        70 ~d~i~clecGk~~k~---LkrHL~~~~gltp   97 (132)
T PF05443_consen   70 PDYIICLECGKKFKT---LKRHLRTHHGLTP   97 (132)
T ss_dssp             SS-EE-TBT--EESB---HHHHHHHTT-S-H
T ss_pred             cCeeEEccCCcccch---HHHHHHHccCCCH
Confidence            344789999999987   6999999988655

The ros chromosomal gene is present in octopine and nopaline strains of Agrobacterium tumefaciens as well as in Rhizobium meliloti (Sinorhizobium meliloti). This gene encodes a 15.5 kDa protein that specifically represses the virC and virD operons in the virulence region of the Ti plasmid [] and is necessary for succinoglycan production []. S. meliloti can produce two types of acidic exopolysaccharides, succinoglycan and galactoglucan, that are interchangeable for infection of Medicago sativa (Alfalfa) nodules. MucR from S. meliloti acts as a transcriptional repressor that blocks the expression of the exp genes responsible for galactoglucan production therefore allowing the exclusive production of succinoglycan [].; GO: 0003677 DNA binding, 0008270 zinc ion binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2JSP_A.

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=87.90  E-value=0.28  Score=22.80  Aligned_cols=25  Identities=20%  Similarity=0.555  Sum_probs=15.8

Q ss_pred             ceeccccccccCChHHHHHHHHHcCCCCceecccccc
Q psy691           59 RFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGK   95 (134)
Q Consensus        59 ~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~   95 (134)
                      .|.|..||..+...            ..|..|+.|+.
T Consensus         2 ~~~C~~CG~i~~g~------------~~p~~CP~Cg~   26 (34)
T cd00729           2 VWVCPVCGYIHEGE------------EAPEKCPICGA   26 (34)
T ss_pred             eEECCCCCCEeECC------------cCCCcCcCCCC
Confidence            37788888665432            14567888764

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>PF13719 zinc_ribbon_5: zinc-ribbon domain

Probab=87.23  E-value=0.57  Score=22.14  Aligned_cols=32  Identities=25%  Similarity=0.573  Sum_probs=17.1

Q ss_pred             eccccccccCChHHHHHHHHHcCCCCceecccccccc
Q psy691           61 ACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGF   97 (134)
Q Consensus        61 ~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f   97 (134)
                      .|+.|+..|.-...     +.-.+.+..+|..|+..|
T Consensus         4 ~CP~C~~~f~v~~~-----~l~~~~~~vrC~~C~~~f   35 (37)
T PF13719_consen    4 TCPNCQTRFRVPDD-----KLPAGGRKVRCPKCGHVF   35 (37)
T ss_pred             ECCCCCceEEcCHH-----HcccCCcEEECCCCCcEe
Confidence            56666666654433     112233456666666555

>TIGR02098 MJ0042_CXXC MJ0042 family finger-like domain

Probab=87.18  E-value=0.53  Score=22.18  Aligned_cols=34  Identities=21%  Similarity=0.430  Sum_probs=19.4

Q ss_pred             eeccccccccCChHHHHHHHHHcCCCCceeccccccccc
Q psy691           60 FACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFN   98 (134)
Q Consensus        60 ~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~   98 (134)
                      ..|+.|+..|.-.....     ........|..|+..|.
T Consensus         3 ~~CP~C~~~~~v~~~~~-----~~~~~~v~C~~C~~~~~   36 (38)
T TIGR02098         3 IQCPNCKTSFRVVDSQL-----GANGGKVRCGKCGHVWY   36 (38)
T ss_pred             EECCCCCCEEEeCHHHc-----CCCCCEEECCCCCCEEE
Confidence            46777777776544321     11222467777776654

This domain contains a CXXCX(19)CXXC motif suggestive of both zinc fingers and thioredoxin, usually found at the N-terminus of prokaryotic proteins. One partially characterized gene, agmX, is among a large set in Myxococcus whose interruption affects adventurous gliding motility.

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=86.77  E-value=0.35  Score=25.06  Aligned_cols=32  Identities=25%  Similarity=0.380  Sum_probs=26.3

Q ss_pred             HcCCCCceecccccccccChhhHHHHHhHhcC
Q psy691           81 CHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG  112 (134)
Q Consensus        81 ~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~  112 (134)
                      ...|+.-+.|+-|+..|...-.+.+|...-++
T Consensus        11 ~RDGE~~lrCPRC~~~FR~~K~Y~RHVNKaH~   42 (65)
T COG4049          11 DRDGEEFLRCPRCGMVFRRRKDYIRHVNKAHG   42 (65)
T ss_pred             ccCCceeeeCCchhHHHHHhHHHHHHhhHHhh
Confidence            34567778999999999999999999776444

>KOG4173|consensus

Probab=86.34  E-value=0.39  Score=31.90  Aligned_cols=46  Identities=26%  Similarity=0.585  Sum_probs=22.6

Q ss_pred             ceeccc--cccccCChHHHHHHHHHcCCCCceecccccccccChhhHHHHH
Q psy691           59 RFACHL--CSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHT  107 (134)
Q Consensus        59 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~  107 (134)
                      .|.|++  |...|..-..+..|..+-++.   .|.+|.+.|.+...|..|+
T Consensus        79 ~~~cqvagc~~~~d~lD~~E~hY~~~h~~---sCs~C~r~~Pt~hLLd~HI  126 (253)
T KOG4173|consen   79 AFACQVAGCCQVFDALDDYEHHYHTLHGN---SCSFCKRAFPTGHLLDAHI  126 (253)
T ss_pred             cccccccchHHHHhhhhhHHHhhhhcccc---hhHHHHHhCCchhhhhHHH
Confidence            355555  445555444444444332222   4555666665555555553

>KOG1146|consensus

Probab=86.25  E-value=0.62  Score=38.97  Aligned_cols=71  Identities=17%  Similarity=0.129  Sum_probs=51.6

Q ss_pred             eccccccccCChHHHHHHHHH-cCCCCceecccccccccChhhHHHHHhHhc-------------------------CCC
Q psy691           61 ACHLCSKSFSLQRLLNRHMKC-HSDVKRYLCTFCGKGFNDTFDLKRHTRTHT-------------------------GKE  114 (134)
Q Consensus        61 ~C~~C~~~f~~~~~l~~H~~~-h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~-------------------------~~~  114 (134)
                      .|.-|+..+.++..+..|+.. |...+-+.|..|+..|.....|-.|+|.-+                         +-+
T Consensus       438 e~~~~e~~~~s~r~~~~~t~~L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~  517 (1406)
T KOG1146|consen  438 ELTKAEPLLESKRSLEGQTVVLHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGK  517 (1406)
T ss_pred             cccchhhhhhhhcccccceeeeecccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCC
Confidence            344566666766666666654 666788999999999999999999999811                         115


Q ss_pred             ccccccCCCcccCccce
Q psy691          115 EEEEEDGKTNVLTTEYL  131 (134)
Q Consensus       115 ~~~c~~~~~~~~~~~~l  131 (134)
                      +|.|.-|.+.+.....|
T Consensus       518 p~~C~~C~~stttng~L  534 (1406)
T KOG1146|consen  518 PYPCRACNYSTTTNGNL  534 (1406)
T ss_pred             cccceeeeeeeecchHH
Confidence            67777777777665444

>PF02892 zf-BED: BED zinc finger; InterPro: IPR003656 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=86.04  E-value=0.81  Score=22.33  Aligned_cols=23  Identities=26%  Similarity=0.631  Sum_probs=11.2

Q ss_pred             CCceeccccccccCCh----HHHHHHH
Q psy691           57 NTRFACHLCSKSFSLQ----RLLNRHM   79 (134)
Q Consensus        57 ~~~~~C~~C~~~f~~~----~~l~~H~   79 (134)
                      .....|..|++.+...    .+|.+|+
T Consensus        14 ~~~a~C~~C~~~~~~~~~~ts~l~~HL   40 (45)
T PF02892_consen   14 KKKAKCKYCGKVIKYSSGGTSNLKRHL   40 (45)
T ss_dssp             SS-EEETTTTEE-----SSTHHHHHHH
T ss_pred             cCeEEeCCCCeEEeeCCCcHHHHHHhh
Confidence            3445677777666553    5566665

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents predicted BED-type zinc finger domains. The BED finger which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain []. Some proteins known to contain a BED domain include animal, plant and fungi AC1 and Hobo-like transposases; Caenorhabditis elegans Dpy-20 protein, a predicted cuticular gene transcriptional regulator; Drosophila BEAF (boundary element-associated factor), thought to be involved in chromatin insulation; Drosophila DREF, a transcriptional regulator for S-phase genes; and tobacco 3AF1 and tomato E4/E8-BP1, light- and ethylene-regulated DNA binding proteins that contain two BED fingers. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003677 DNA binding; PDB: 2DJR_A 2CT5_A.

>KOG2186|consensus

Probab=85.73  E-value=0.47  Score=32.48  Aligned_cols=41  Identities=15%  Similarity=0.318  Sum_probs=33.3

Q ss_pred             eecccccccccChhhHHHHHhHhcCCCccccccCCCcccCccc
Q psy691           88 YLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDGKTNVLTTEY  130 (134)
Q Consensus        88 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~~~~~~  130 (134)
                      |.|..||....- ..+.+|+...++ ..|.|.-|...|...++
T Consensus         4 FtCnvCgEsvKK-p~vekH~srCrn-~~fSCIDC~k~F~~~sY   44 (276)
T KOG2186|consen    4 FTCNVCGESVKK-PQVEKHMSRCRN-AYFSCIDCGKTFERVSY   44 (276)
T ss_pred             Eehhhhhhhccc-cchHHHHHhccC-CeeEEeecccccccchh
Confidence            789999987554 567789988888 88999888888887654

>smart00614 ZnF_BED BED zinc finger

Probab=85.61  E-value=0.88  Score=22.94  Aligned_cols=25  Identities=36%  Similarity=0.699  Sum_probs=18.5

Q ss_pred             ceeccccccccCCh-----HHHHHHHH-HcC
Q psy691           59 RFACHLCSKSFSLQ-----RLLNRHMK-CHS   83 (134)
Q Consensus        59 ~~~C~~C~~~f~~~-----~~l~~H~~-~h~   83 (134)
                      .-.|..|++.+...     ++|.+|+. .|.
T Consensus        18 ~a~C~~C~~~l~~~~~~gTs~L~rHl~~~h~   48 (50)
T smart00614       18 RAKCKYCGKKLSRSSKGGTSNLRRHLRRKHP   48 (50)
T ss_pred             EEEecCCCCEeeeCCCCCcHHHHHHHHhHCc
Confidence            46899999988765     57888877 453

DNA-binding domain in chromatin-boundary-element-binding proteins and transposases

>KOG4173|consensus

Probab=85.49  E-value=0.38  Score=31.93  Aligned_cols=49  Identities=29%  Similarity=0.633  Sum_probs=41.0

Q ss_pred             eccccccccCChHHHHHHHHH-c---------CCCCceeccc--ccccccChhhHHHHHhH
Q psy691           61 ACHLCSKSFSLQRLLNRHMKC-H---------SDVKRYLCTF--CGKGFNDTFDLKRHTRT  109 (134)
Q Consensus        61 ~C~~C~~~f~~~~~l~~H~~~-h---------~~~k~~~C~~--C~~~f~~~~~l~~H~~~  109 (134)
                      .|.+|.+.|.+...|..|+.. |         .|.-.|.|.+  |+..|.+......|+-.
T Consensus       108 sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~KFkT~r~RkdH~I~  168 (253)
T KOG4173|consen  108 SCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTEKFKTSRDRKDHMIR  168 (253)
T ss_pred             hhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhhhhhhhhhhhhHHHH
Confidence            899999999999999999864 3         3455699976  99999999888888654

>PF04959 ARS2: Arsenite-resistance protein 2; InterPro: IPR007042 This entry represents Arsenite-resistance protein 2 (also known as Serrate RNA effector molecule homolog) which is thought to play a role in arsenite resistance [], although does not directly confer arsenite resistance but rather modulates arsenic sensitivity []

Probab=85.38  E-value=0.85  Score=30.64  Aligned_cols=29  Identities=24%  Similarity=0.614  Sum_probs=21.5

Q ss_pred             CCCCceeccccccccCChHHHHHHHHHcC
Q psy691           55 KDNTRFACHLCSKSFSLQRLLNRHMKCHS   83 (134)
Q Consensus        55 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~   83 (134)
                      ..+..|.|.+|+|.|+-...+..|+...+
T Consensus        73 ~~~~K~~C~lc~KlFkg~eFV~KHI~nKH  101 (214)
T PF04959_consen   73 EDEDKWRCPLCGKLFKGPEFVRKHIFNKH  101 (214)
T ss_dssp             SSSEEEEE-SSS-EESSHHHHHHHHHHH-
T ss_pred             HcCCEECCCCCCcccCChHHHHHHHhhcC
Confidence            44557999999999999999999988733

Arsenite is a carcinogenic compound which can act as a comutagen by inhibiting DNA repair. It is also involved in cell cycle progression at S phase. ; PDB: 3AX1_A.

>COG4957 Predicted transcriptional regulator [Transcription]

Probab=85.25  E-value=2.7  Score=26.07  Aligned_cols=25  Identities=28%  Similarity=0.476  Sum_probs=21.1

Q ss_pred             eeccccccccCChHHHHHHHHHcCCCCc
Q psy691           60 FACHLCSKSFSLQRLLNRHMKCHSDVKR   87 (134)
Q Consensus        60 ~~C~~C~~~f~~~~~l~~H~~~h~~~k~   87 (134)
                      ..|-++|+.|+   .|++|+.+|.+.-|
T Consensus        77 IicLEDGkkfK---SLKRHL~t~~gmTP  101 (148)
T COG4957          77 IICLEDGKKFK---SLKRHLTTHYGLTP  101 (148)
T ss_pred             EEEeccCcchH---HHHHHHhcccCCCH
Confidence            57999999997   69999999987543

>PF04959 ARS2: Arsenite-resistance protein 2; InterPro: IPR007042 This entry represents Arsenite-resistance protein 2 (also known as Serrate RNA effector molecule homolog) which is thought to play a role in arsenite resistance [], although does not directly confer arsenite resistance but rather modulates arsenic sensitivity []

Probab=85.10  E-value=0.39  Score=32.22  Aligned_cols=30  Identities=20%  Similarity=0.493  Sum_probs=23.0

Q ss_pred             CCceecccccccccChhhHHHHHhHhcCCC
Q psy691           85 VKRYLCTFCGKGFNDTFDLKRHTRTHTGKE  114 (134)
Q Consensus        85 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~  114 (134)
                      +..|.|..|+|.|.-......|+..-|.|+
T Consensus        75 ~~K~~C~lc~KlFkg~eFV~KHI~nKH~e~  104 (214)
T PF04959_consen   75 EDKWRCPLCGKLFKGPEFVRKHIFNKHPEK  104 (214)
T ss_dssp             SEEEEE-SSS-EESSHHHHHHHHHHH-HHH
T ss_pred             CCEECCCCCCcccCChHHHHHHHhhcCHHH
Confidence            446999999999999999999999865543

Arsenite is a carcinogenic compound which can act as a comutagen by inhibiting DNA repair. It is also involved in cell cycle progression at S phase. ; PDB: 3AX1_A.

>PRK09678 DNA-binding transcriptional regulator; Provisional

Probab=85.09  E-value=0.18  Score=27.72  Aligned_cols=18  Identities=17%  Similarity=0.241  Sum_probs=9.8

Q ss_pred             CCceecc--cccccccChhh
Q psy691           85 VKRYLCT--FCGKGFNDTFD  102 (134)
Q Consensus        85 ~k~~~C~--~C~~~f~~~~~  102 (134)
                      ++-++|.  .||..|.....
T Consensus        25 ~~Y~qC~N~eCg~tF~t~es   44 (72)
T PRK09678         25 ERYHQCQNVNCSATFITYES   44 (72)
T ss_pred             eeeeecCCCCCCCEEEEEEE
Confidence            4445665  46666655433

>KOG2785|consensus

Probab=84.49  E-value=1.3  Score=32.25  Aligned_cols=51  Identities=24%  Similarity=0.485  Sum_probs=41.2

Q ss_pred             ceeccccccccCChHHHHHHHHH--c-----------------------------------CCCCceecccccccccChh
Q psy691           59 RFACHLCSKSFSLQRLLNRHMKC--H-----------------------------------SDVKRYLCTFCGKGFNDTF  101 (134)
Q Consensus        59 ~~~C~~C~~~f~~~~~l~~H~~~--h-----------------------------------~~~k~~~C~~C~~~f~~~~  101 (134)
                      .|.|.-|...|.....-+.|+.+  |                                   ...-++.|..|.+.|....
T Consensus         3 ~ftC~tC~v~F~~ad~Qr~HyKSdWHRYNLKRkVA~lPPItaE~F~~k~~s~~~~~~~~~e~~~~~~~c~~c~k~~~s~~   82 (390)
T KOG2785|consen    3 GFTCNTCNVEFDDADEQRAHYKSDWHRYNLKRKVASLPPITAEEFNEKVLSDDSEKEENLEEAESVVYCEACNKSFASPK   82 (390)
T ss_pred             cceeeceeeeeccHHHHHHHhhhhHHHhhHHhHhhcCCCcCHHHHhHHHhhhhhhhhhhhhhcccceehHHhhccccChh
Confidence            48999999999998888888876  4                                   1123688999999999988


Q ss_pred             hHHHHHhH
Q psy691          102 DLKRHTRT  109 (134)
Q Consensus       102 ~l~~H~~~  109 (134)
                      ....|+..
T Consensus        83 a~~~hl~S   90 (390)
T KOG2785|consen   83 AHENHLKS   90 (390)
T ss_pred             hHHHHHHH
Confidence            88888765

>COG1592 Rubrerythrin [Energy production and conversion]

Probab=84.34  E-value=0.64  Score=29.94  Aligned_cols=23  Identities=26%  Similarity=0.842  Sum_probs=15.0

Q ss_pred             ceeccccccccCChHHHHHHHHHcCCCCceeccccc
Q psy691           59 RFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCG   94 (134)
Q Consensus        59 ~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~   94 (134)
                      .|.|.+||..             |.++-|-.|++|+
T Consensus       134 ~~vC~vCGy~-------------~~ge~P~~CPiCg  156 (166)
T COG1592         134 VWVCPVCGYT-------------HEGEAPEVCPICG  156 (166)
T ss_pred             EEEcCCCCCc-------------ccCCCCCcCCCCC
Confidence            5777777654             3345667777776

>smart00659 RPOLCX RNA polymerase subunit CX

Probab=84.09  E-value=0.79  Score=22.63  Aligned_cols=26  Identities=19%  Similarity=0.567  Sum_probs=16.1

Q ss_pred             eeccccccccCChHHHHHHHHHcCCCCceeccccccc
Q psy691           60 FACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKG   96 (134)
Q Consensus        60 ~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~   96 (134)
                      |.|..||..|...           ...+..|+.||..
T Consensus         3 Y~C~~Cg~~~~~~-----------~~~~irC~~CG~r   28 (44)
T smart00659        3 YICGECGRENEIK-----------SKDVVRCRECGYR   28 (44)
T ss_pred             EECCCCCCEeecC-----------CCCceECCCCCce
Confidence            6777777776533           2345677777643

present in RNA polymerase I, II and III

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=84.06  E-value=0.2  Score=33.66  Aligned_cols=19  Identities=21%  Similarity=0.744  Sum_probs=11.9

Q ss_pred             CceeccccccccCChHHHH
Q psy691           58 TRFACHLCSKSFSLQRLLN   76 (134)
Q Consensus        58 ~~~~C~~C~~~f~~~~~l~   76 (134)
                      +...|++|++.|..+....
T Consensus         4 k~~~CPvC~~~F~~~~vrs   22 (214)
T PF09986_consen    4 KKITCPVCGKEFKTKKVRS   22 (214)
T ss_pred             CceECCCCCCeeeeeEEEc
Confidence            4567777777777654433

>TIGR00622 ssl1 transcription factor ssl1

Probab=83.58  E-value=1.1  Score=26.91  Aligned_cols=65  Identities=15%  Similarity=0.137  Sum_probs=32.7

Q ss_pred             ceeccccccccCChHHHHHHHHHcCCCCc------------eecccccccccChhhHHHHHhHhcCCCccccccCCCcc
Q psy691           59 RFACHLCSKSFSLQRLLNRHMKCHSDVKR------------YLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDGKTNV  125 (134)
Q Consensus        59 ~~~C~~C~~~f~~~~~l~~H~~~h~~~k~------------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~  125 (134)
                      |-.|++|+-......+|.+...--..-++            ..|-.|.+.|........  ..-.....|.|+.|+..|
T Consensus        15 P~~CpiCgLtLVss~HLARSyHHLfPl~~f~ev~~~~~~~~~~C~~C~~~f~~~~~~~~--~~~~~~~~y~C~~C~~~F   91 (112)
T TIGR00622        15 PVECPICGLTLILSTHLARSYHHLFPLKAFQEIPLEEYNGSRFCFGCQGPFPKPPVSPF--DELKDSHRYVCAVCKNVF   91 (112)
T ss_pred             CCcCCcCCCEEeccchHHHhhhccCCCcccccccccccCCCCcccCcCCCCCCcccccc--cccccccceeCCCCCCcc
Confidence            45778888777777777653210000111            137777777765431110  001223357776666554

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>PF13717 zinc_ribbon_4: zinc-ribbon domain

Probab=83.39  E-value=1.2  Score=20.93  Aligned_cols=33  Identities=18%  Similarity=0.544  Sum_probs=18.3

Q ss_pred             eeccccccccCChHHHHHHHHHcCCCCceecccccccc
Q psy691           60 FACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGF   97 (134)
Q Consensus        60 ~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f   97 (134)
                      ..|+.|+..|.-....     .-......+|..|+..|
T Consensus         3 i~Cp~C~~~y~i~d~~-----ip~~g~~v~C~~C~~~f   35 (36)
T PF13717_consen    3 ITCPNCQAKYEIDDEK-----IPPKGRKVRCSKCGHVF   35 (36)
T ss_pred             EECCCCCCEEeCCHHH-----CCCCCcEEECCCCCCEe
Confidence            3566777766655442     12233456777776655

>TIGR02300 FYDLN_acid conserved hypothetical protein TIGR02300

Probab=82.83  E-value=0.86  Score=27.90  Aligned_cols=35  Identities=20%  Similarity=0.314  Sum_probs=26.1

Q ss_pred             ceeccccccccCChHHHHHHHHHcCCCCceecccccccccChhhHH
Q psy691           59 RFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLK  104 (134)
Q Consensus        59 ~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~  104 (134)
                      ...|+.||+.|..   |        +..|..|+.||..|.....+.
T Consensus         9 Kr~Cp~cg~kFYD---L--------nk~p~vcP~cg~~~~~~~~~~   43 (129)
T TIGR02300         9 KRICPNTGSKFYD---L--------NRRPAVSPYTGEQFPPEEALK   43 (129)
T ss_pred             cccCCCcCccccc---c--------CCCCccCCCcCCccCcchhhc
Confidence            3589999999862   2        357899999999887664443

Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues. The function of members of this family is unknown.

>PF05290 Baculo_IE-1: Baculovirus immediate-early protein (IE-0); InterPro: IPR007954 This entry contains the Baculovirus immediate-early protein IE-0

Probab=81.81  E-value=0.89  Score=28.08  Aligned_cols=55  Identities=18%  Similarity=0.284  Sum_probs=31.4

Q ss_pred             CceeccccccccCChHHHHHHHHHcCCCCceeccc---ccccccChhhHHHHHhHhcCCCccccccCCCcccCccc
Q psy691           58 TRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTF---CGKGFNDTFDLKRHTRTHTGKEEEEEEDGKTNVLTTEY  130 (134)
Q Consensus        58 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~---C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~~~~~~  130 (134)
                      +.|+|.+|..+...+..|          ||-.|-.   |+.-   -..|.+|-.+|     =.|+.|+++|.+++.
T Consensus        79 ~lYeCnIC~etS~ee~FL----------KPneCCgY~iCn~C---ya~LWK~~~~y-----pvCPvCkTSFKss~~  136 (140)
T PF05290_consen   79 KLYECNICKETSAEERFL----------KPNECCGYSICNAC---YANLWKFCNLY-----PVCPVCKTSFKSSSS  136 (140)
T ss_pred             CceeccCcccccchhhcC----------CcccccchHHHHHH---HHHHHHHcccC-----CCCCccccccccccc
Confidence            457777777665543332          3433321   3322   23455554433     269999999998864

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=81.55  E-value=0.8  Score=29.23  Aligned_cols=33  Identities=6%  Similarity=-0.032  Sum_probs=20.8

Q ss_pred             CCCCceecccccccccChhhHHHHHhHhcCCCccccccCCCc
Q psy691           83 SDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDGKTN  124 (134)
Q Consensus        83 ~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~  124 (134)
                      .+..-|.|+.|+..|+....+.         ..|.|+.|+..
T Consensus       105 ~~~~~Y~Cp~c~~r~tf~eA~~---------~~F~Cp~Cg~~  137 (158)
T TIGR00373       105 TNNMFFICPNMCVRFTFNEAME---------LNFTCPRCGAM  137 (158)
T ss_pred             cCCCeEECCCCCcEeeHHHHHH---------cCCcCCCCCCE
Confidence            3345577777777777766664         25777666554

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

>PRK06266 transcription initiation factor E subunit alpha; Validated

Probab=80.70  E-value=0.77  Score=29.93  Aligned_cols=17  Identities=18%  Similarity=0.413  Sum_probs=9.4

Q ss_pred             ceecccccccccChhhH
Q psy691           87 RYLCTFCGKGFNDTFDL  103 (134)
Q Consensus        87 ~~~C~~C~~~f~~~~~l  103 (134)
                      -|.|+.|+..|+....+
T Consensus       117 ~Y~Cp~C~~rytf~eA~  133 (178)
T PRK06266        117 FFFCPNCHIRFTFDEAM  133 (178)
T ss_pred             EEECCCCCcEEeHHHHh
Confidence            45666666555555444

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=80.58  E-value=0.65  Score=33.37  Aligned_cols=22  Identities=27%  Similarity=0.629  Sum_probs=14.4

Q ss_pred             eeccc--cccccCChHHHHHHHHH
Q psy691           60 FACHL--CSKSFSLQRLLNRHMKC   81 (134)
Q Consensus        60 ~~C~~--C~~~f~~~~~l~~H~~~   81 (134)
                      |.|+.  |.........|+.|.+.
T Consensus       152 F~CP~skc~~~C~~~k~lk~H~K~  175 (493)
T COG5236         152 FKCPKSKCHRRCGSLKELKKHYKA  175 (493)
T ss_pred             hcCCchhhhhhhhhHHHHHHHHHh
Confidence            66765  55555556677777776

>PRK00398 rpoP DNA-directed RNA polymerase subunit P; Provisional

Probab=80.56  E-value=0.75  Score=22.76  Aligned_cols=30  Identities=20%  Similarity=0.625  Sum_probs=17.0

Q ss_pred             ceeccccccccCChHHHHHHHHHcCCCCceeccccccccc
Q psy691           59 RFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFN   98 (134)
Q Consensus        59 ~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~   98 (134)
                      .|.|+.||..|.....          .....|+.||..+.
T Consensus         3 ~y~C~~CG~~~~~~~~----------~~~~~Cp~CG~~~~   32 (46)
T PRK00398          3 EYKCARCGREVELDEY----------GTGVRCPYCGYRIL   32 (46)
T ss_pred             EEECCCCCCEEEECCC----------CCceECCCCCCeEE
Confidence            4677777776654221          11467777775443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	134
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		4e-09
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		2e-08
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		6e-08
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		2e-05
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		3e-05
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		3e-05
1x6e_A	72	Solution Structures Of The C2h2 Type Zinc Finger Do		3e-05
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		6e-05
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		1e-04
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		2e-04
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		2e-04
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		3e-04
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		3e-04
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		3e-04
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		3e-04
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		3e-04
2adr_A	60	Adr1 Dna-Binding Domain From Saccharomyces Cerevisi		3e-04
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		3e-04
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		3e-04
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		5e-04

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 27/54 (50%), Positives = 32/54 (59%)
Query: 60  FACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGK 113
           +AC  C KSFS    L  H + H+  K Y C  CGK F+D  DL RH RTHTG+
Sbjct: 22  YACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGE 75

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 24/54 (44%), Positives = 33/54 (61%)
Query: 60  FACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGK 113
           + C  C KSFS    L +H + H+  K Y C  CGK F+ + DL++H RTHTG+
Sbjct: 5   YKCPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRTHTGE 58

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 24/54 (44%), Positives = 33/54 (61%)
Query: 60  FACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGK 113
           F C +C KSF     L+ H+  HSD + Y C +CGK F+   D+K+HT  HTG+
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGE 55

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 31/59 (52%)
Query: 54  RKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
           +++  R+ C  C KSFS    L++H + H+  K Y C  CGK F     L  H R HTG
Sbjct: 13  QRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTG 71

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 27/54 (50%)
Query: 60  FACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGK 113
           + C  C  SF  +  L  H   H+  K Y C  CG  FN   +LK HTR H+G+
Sbjct: 18  YKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGE 71

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 20/50 (40%), Positives = 27/50 (54%)
Query: 62  CHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHT 111
           C +C K FS +  L  HM+CH+ VK Y C  C     D+  L +H R H+
Sbjct: 11  CEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHS 60

>pdb|1X6E|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Zinc Finger Protein 24 Length = 72

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 20/52 (38%), Positives = 27/52 (51%)
Query: 60  FACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHT 111
           + C  C K+FS   +L +H + H+  K Y C  CGK F+    L  H R HT
Sbjct: 15  YGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHT 66

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 52  TGRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTH 110
           TG+K    F C +C ++FS Q  LN H++ H+  K + C  CG+ F       RHT+ H
Sbjct: 30  TGQKP---FQCRICMRNFSQQASLNAHIRTHTGEKPFACDICGRKFATLHTRTRHTKIH 85

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 62  CHLCSKSFSLQRLLNRHMKCHSDVKRYLCTF--CGKGFNDTFDLKRHTRTHTG 112
           C  C K+F     L RH   H+  K + CTF  CGK F+  F+L+ H R HTG
Sbjct: 37  CAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTG 89

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/49 (42%), Positives = 29/49 (59%)
Query: 65  CSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGK 113
           C + FS    L RH + H+ VK + C  C + F+ +  LK HTRTHTG+
Sbjct: 44  CERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGE 92

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/51 (35%), Positives = 29/51 (56%)
Query: 60  FACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTH 110
           F C +C ++FS    L  H++ H+  K + C  CG+ F  + + KRHT+ H
Sbjct: 35  FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIH 85

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 52  TGRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTH 110
           TG+K    F C +C ++FS    LN+H++ H+  K + C  CG+ F       RHT+ H
Sbjct: 30  TGQKP---FQCRICMRNFSQHTGLNQHIRTHTGEKPFACDICGRKFATLHTRDRHTKIH 85

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 18/51 (35%), Positives = 29/51 (56%)
Query: 60  FACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTH 110
           F C +C ++FS    L  H++ H+  K + C  CG+ F  + + KRHT+ H
Sbjct: 35  FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIH 85

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 18/51 (35%), Positives = 29/51 (56%)
Query: 60  FACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTH 110
           F C +C ++FS    L  H++ H+  K + C  CG+ F  + + KRHT+ H
Sbjct: 35  FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIH 85

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 18/51 (35%), Positives = 29/51 (56%)
Query: 60  FACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTH 110
           F C +C ++FS    L  H++ H+  K + C  CG+ F  + + KRHT+ H
Sbjct: 35  FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIH 85

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 18/51 (35%), Positives = 29/51 (56%)
Query: 60  FACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTH 110
           F C +C ++FS    L  H++ H+  K + C  CG+ F  + + KRHT+ H
Sbjct: 35  FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIH 85

>pdb|2ADR|A Chain A, Adr1 Dna-Binding Domain From Saccharomyces Cerevisiae, Nmr, 25 Structures Length = 60

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 60  FACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHT-RTHTG 112
           F C +C+++F+ Q  L RH + H++ K Y C  C + F     L RH  + H+G
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 18/51 (35%), Positives = 29/51 (56%)
Query: 60  FACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTH 110
           F C +C ++FS    L  H++ H+  K + C  CG+ F  + + KRHT+ H
Sbjct: 34  FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIH 84

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 18/51 (35%), Positives = 29/51 (56%)
Query: 60  FACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTH 110
           F C +C ++FS    L  H++ H+  K + C  CG+ F  + + KRHT+ H
Sbjct: 35  FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIH 85

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 27/60 (45%)
Query: 53  GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
           G   ++  AC +C K F     LNRH   HS  K Y C  CG  F     +  H R+H G
Sbjct: 1   GSSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 60

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	134
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	8e-15
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-13
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	3e-14
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	3e-11
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	3e-06
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	5e-13
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	4e-05
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	5e-13
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	1e-10
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	7e-10
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	3e-04
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	5e-13
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	6e-10
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-05
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	8e-13
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-11
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	6e-11
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-12
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	6e-05
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	5e-12
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	9e-10
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	7e-12
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	8e-09
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	1e-11
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	2e-06
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	1e-04
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	1e-11
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-10
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	4e-10
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	3e-08
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-11
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-11
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	6e-05
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	3e-11
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	1e-05
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	4e-11
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	1e-04
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	4e-11
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	7e-07
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	7e-11
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-09
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-09
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-09
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	1e-10
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	1e-05
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	1e-10
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	2e-06
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	1e-10
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	2e-06
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-10
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	5e-10
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	4e-07
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	3e-10
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	1e-07
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	3e-10
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-09
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	5e-10
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-09
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-09
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-09
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-09
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	4e-06
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	6e-10
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	4e-09
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	7e-10
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	8e-10
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	9e-10
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	3e-09
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-04
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	1e-09
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	5e-05
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-09
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-09
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	1e-04
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	4e-09
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	2e-08
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	2e-08
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	3e-04
2epa_A	72	Krueppel-like factor 10; transforming growth facto	6e-08
2epa_A	72	Krueppel-like factor 10; transforming growth facto	3e-06
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	7e-08
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	1e-07
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	4e-07
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	5e-06
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	6e-07
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	7e-07
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	2e-05
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	8e-07
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-06
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-06
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	1e-06
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-06
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-06
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-06
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	2e-06
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	2e-06
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-06
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-06
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-06
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-06
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-06
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-06
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-06
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	3e-06
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-06
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-06
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-06
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-06
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-06
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	4e-06
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	4e-06
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	4e-06
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-06
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-06
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-06
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	6e-06
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-06
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-06
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-06
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-06
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-06
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-06
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-06
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-06
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	6e-06
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	7e-06
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	4e-05
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-06
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	7e-06
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-06
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-06
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	8e-06
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-06
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	8e-06
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-06
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-06
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	9e-06
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-05
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-05
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-05
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-05
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-05
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	1e-05
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-05
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-05
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-05
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	1e-05
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-05
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-05
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-05
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-05
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-05
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-05
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-05
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-05
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-05
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-05
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-05
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-05
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	2e-05
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-05
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-05
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-05
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-05
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	2e-05
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-05
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	2e-05
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-05
1ard_A	29	Yeast transcription factor ADR1; transcription reg	3e-05
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-05
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	3e-05
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	3e-05
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-05
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	5e-05
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-05
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	6e-05
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	8e-05
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	9e-05
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	9e-05
1ej6_B	1275	Lambda1; icosahedral, non-equivalence, dsRNA virus	1e-04
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	2e-04
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	2e-04
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	4e-04
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	4e-04
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	4e-04
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	5e-04
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	7e-04

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 64.0 bits (157), Expect = 8e-15
 Identities = 18/56 (32%), Positives = 32/56 (57%)

Query: 60  FACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEE 115
           F C +C ++FS    L  H++ H+  K + C  CG+ F  + + KRHT+ H  +++
Sbjct: 35  FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQKD 90

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 60.6 bits (148), Expect = 2e-13
 Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 2/55 (3%)

Query: 60  FACHL--CSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
           +AC +  C + FS    L RH++ H+  K + C  C + F+ +  L  H RTHTG
Sbjct: 5   YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTG 59

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 62.5 bits (153), Expect = 3e-14
 Identities = 17/64 (26%), Positives = 30/64 (46%)

Query: 60  FACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEE 119
           F C +C ++FS    L  H++ H+  K + C  CG+ F  + + KRH          E++
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDK 63

Query: 120 DGKT 123
             + 
Sbjct: 64  VEEL 67

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 54.8 bits (133), Expect = 3e-11
 Identities = 10/56 (17%), Positives = 18/56 (32%), Gaps = 4/56 (7%)

Query: 60  FACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHT---RTHTG 112
           FAC +C + F+      RH          L     +  +  + L+      +   G
Sbjct: 32  FACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENEVARLKKLVG 86

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 41.7 bits (99), Expect = 3e-06
 Identities = 11/28 (39%), Positives = 16/28 (57%)

Query: 85  VKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
           +K + C  C + F+ +  L  H RTHTG
Sbjct: 1   MKPFQCRICMRNFSRSDHLTTHIRTHTG 28

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 59.3 bits (144), Expect = 5e-13
 Identities = 14/64 (21%), Positives = 24/64 (37%), Gaps = 3/64 (4%)

Query: 60  FACHLCSKSFSLQRLLNRHMKCHSDV---KRYLCTFCGKGFNDTFDLKRHTRTHTGKEEE 116
             C +C  +   +  LN H + H++     R+ C FCGK F     +  H          
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67

Query: 117 EEED 120
             ++
Sbjct: 68  APQE 71

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 38.5 bits (90), Expect = 4e-05
 Identities = 8/35 (22%), Positives = 8/35 (22%)

Query: 82  HSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEE 116
            S      C  CG        L  H R H      
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAA 36

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 60.2 bits (147), Expect = 5e-13
 Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 2/55 (3%)

Query: 60  FACHL--CSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
           + C    C + FS    L RH + H+ VK + C  C + F+ +  LK HTRTHTG
Sbjct: 37  YQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTG 91

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 54.1 bits (131), Expect = 1e-10
 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 2/50 (4%)

Query: 65  CSKSFSLQRLLNRHMKCHSDVKRYLCTF--CGKGFNDTFDLKRHTRTHTG 112
           C+K +     L  H + H+  K Y C F  C + F+ +  LKRH R HTG
Sbjct: 14  CNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTG 63

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 51.8 bits (125), Expect = 7e-10
 Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 2/53 (3%)

Query: 60  FACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTF--CGKGFNDTFDLKRHTRTH 110
           F C  C + FS    L  H + H+  K + C +  C K F  + +L RH   H
Sbjct: 67  FQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 9/29 (31%), Positives = 15/29 (51%), Gaps = 2/29 (6%)

Query: 86  KRYLCT--FCGKGFNDTFDLKRHTRTHTG 112
           + ++C    C K +     L+ H+R HTG
Sbjct: 5   RPFMCAYPGCNKRYFKLSHLQMHSRKHTG 33

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 59.4 bits (145), Expect = 5e-13
 Identities = 21/53 (39%), Positives = 24/53 (45%)

Query: 60  FACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
            AC +C K F     LNRH   HS  K Y C  CG  F     +  H R+H G
Sbjct: 8   VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 60

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 51.7 bits (125), Expect = 6e-10
 Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 3/56 (5%)

Query: 60  FACHLCSKSFSLQRLLNRHMKCHS--DVKRYLCTFCGKGFNDTFDLKRHT-RTHTG 112
           ++C +C   F  +  ++ H++ H     K Y+C  CGKGF+    L  H  + H+G
Sbjct: 36  YSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHSG 91

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 12/31 (38%), Positives = 15/31 (48%)

Query: 82  HSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
            S      C  CGK F D + L RH  +H+G
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRHKLSHSG 32

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 59.8 bits (146), Expect = 8e-13
 Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 2/55 (3%)

Query: 60  FACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTF--CGKGFNDTFDLKRHTRTHTG 112
             C  C K+F     L RH   H+  K + CTF  CGK F+  F+L+ H R HTG
Sbjct: 35  HVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTG 89

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 56.8 bits (138), Expect = 1e-11
 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 3/55 (5%)

Query: 60  FACHL--CSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
            AC    C+K F     + +H+  H   + ++C  CGK F ++  LKRH   HTG
Sbjct: 6   IACPHKGCTKMFRDNSAMRKHLHTHGP-RVHVCAECGKAFVESSKLKRHQLVHTG 59

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 54.8 bits (133), Expect = 6e-11
 Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 4/57 (7%)

Query: 60  FACHL--CSKSFSLQRLLNRHMKCHSDVKRYLCTF--CGKGFNDTFDLKRHTRTHTG 112
           F C    C K FSL   L  H++ H+  + Y+C F  C K F  + +LK H  TH  
Sbjct: 63  FQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAK 119

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 57.6 bits (140), Expect = 2e-12
 Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 2/55 (3%)

Query: 60  FACHLCSKSFSLQRLLNRHM--KCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
           + C +CS+ ++      RH       +VK Y C FC K F    ++  H +    
Sbjct: 11  YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK 65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 37.9 bits (89), Expect = 6e-05
 Identities = 6/34 (17%), Positives = 10/34 (29%)

Query: 82  HSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEE 115
                 Y C  C + +    +  RH  T   +  
Sbjct: 5   KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNV 38

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 56.7 bits (138), Expect = 5e-12
 Identities = 24/53 (45%), Positives = 32/53 (60%)

Query: 60  FACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
           F C +C KSF     L+ H+  HSD + Y C +CGK F+   D+K+HT  HTG
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTG 54

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 50.9 bits (123), Expect = 9e-10
 Identities = 18/53 (33%), Positives = 28/53 (52%)

Query: 60  FACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
           + C  C K F  +  + +H   H+  K + C  CGK F+ + +L  H+R HTG
Sbjct: 30  YPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG 82

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 56.0 bits (136), Expect = 7e-12
 Identities = 12/56 (21%), Positives = 22/56 (39%), Gaps = 3/56 (5%)

Query: 60  FACHLCSKSFSLQRLLNRHMKCHS--DVKRYLCTFCGKGFNDTFDLKRHTRT-HTG 112
           + C++C   F+    +  H+      +V ++ C  C        DL  H R  H+ 
Sbjct: 16  YECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSY 71

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 48.3 bits (116), Expect = 8e-09
 Identities = 9/41 (21%), Positives = 13/41 (31%)

Query: 75  LNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEE 115
                + HS  K Y C  C   F  +  +K H      +  
Sbjct: 3   SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENV 43

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 55.6 bits (135), Expect = 1e-11
 Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 4/57 (7%)

Query: 60  FACHLCSKSFSLQRLLNRHMKCH----SDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
           +AC  C K+F  ++LL+ H K +         ++C+ CGK F     + RH     G
Sbjct: 16  YACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAG 72

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 42.1 bits (100), Expect = 2e-06
 Identities = 9/38 (23%), Positives = 14/38 (36%)

Query: 75  LNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                + H+  K Y C+ C K F     L  H + +  
Sbjct: 3   SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHD 40

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 37.5 bits (88), Expect = 1e-04
 Identities = 8/38 (21%), Positives = 13/38 (34%)

Query: 60 FACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGF 97
          F C  C K+F+ +  + RH    +          G   
Sbjct: 48 FVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGPSS 85

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 57.3 bits (139), Expect = 1e-11
 Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 2/53 (3%)

Query: 62  CHLCSKSFSLQRLLNRHMKCHSDVKRYLCTF--CGKGFNDTFDLKRHTRTHTG 112
           C    KSF  +  L  H++ H+  K + C F  CGK F  + +LK H RTHTG
Sbjct: 65  CPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTG 117

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 54.2 bits (131), Expect = 2e-10
 Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 4/57 (7%)

Query: 60  FACHL--CSKSFSLQRLLNRHMKCHSDVKRYLCTF--CGKGFNDTFDLKRHTRTHTG 112
           F C    C K F+    L  H + H+  K + C F  C + F ++ D K+H   HT 
Sbjct: 91  FPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTS 147

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 53.4 bits (129), Expect = 4e-10
 Identities = 15/62 (24%), Positives = 19/62 (30%), Gaps = 9/62 (14%)

Query: 60  FACHLCSKSFSLQRLLNRHMKCHSDVKRY---------LCTFCGKGFNDTFDLKRHTRTH 110
                C ++FS    L  H+                   C   GK F   + L  H R H
Sbjct: 26  RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVH 85

Query: 111 TG 112
           TG
Sbjct: 86  TG 87

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 48.4 bits (116), Expect = 3e-08
 Identities = 7/49 (14%), Positives = 14/49 (28%), Gaps = 3/49 (6%)

Query: 67  KSFSLQRLLNRHMKC---HSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
            S S  + + + + C              C + F+   +L  H      
Sbjct: 2   SSGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHV 50

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 55.5 bits (135), Expect = 2e-11
 Identities = 20/51 (39%), Positives = 27/51 (52%)

Query: 62  CHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
           C +C K FS +  L  HM+CH+ VK Y C  C     D+  L +H R H+ 
Sbjct: 11  CEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSD 61

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 55.5 bits (135), Expect = 2e-11
 Identities = 16/51 (31%), Positives = 26/51 (50%)

Query: 62  CHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
           C  C  + +    LN+H++ HSD + + C  C     ++  L  H R+HTG
Sbjct: 39  CKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHTG 89

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 38.6 bits (91), Expect = 6e-05
 Identities = 12/31 (38%), Positives = 14/31 (45%)

Query: 82  HSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                 + C  CGK F+    LK H R HTG
Sbjct: 3   SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTG 33

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 54.4 bits (132), Expect = 3e-11
 Identities = 13/53 (24%), Positives = 21/53 (39%)

Query: 60  FACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
             C  CS S S +  L  H + H   + + C +C        +L +H +   G
Sbjct: 10  EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG 62

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 39.8 bits (94), Expect = 1e-05
 Identities = 7/31 (22%), Positives = 10/31 (32%)

Query: 82  HSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
            S      C+ C    +    L+ H R H  
Sbjct: 4   GSSGHPEKCSECSYSCSSKAALRIHERIHCT 34

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 54.2 bits (131), Expect = 4e-11
 Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 5/74 (6%)

Query: 40  PTRVEPEKVESTTGRKDNTRFACHL--CSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGF 97
           P  +           +    +AC +  C + FS    L RH++ H+  K + C  C + F
Sbjct: 3   PHPMNNLLNYVVPKMR---PYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNF 59

Query: 98  NDTFDLKRHTRTHT 111
           + +  L  H RTHT
Sbjct: 60  SRSDHLTTHIRTHT 73

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 36.9 bits (86), Expect = 1e-04
 Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)

Query: 73  RLLNRHMKCHSDVKRYLCT--FCGKGFNDTFDLKRHTRTHTG 112
            + N        ++ Y C    C + F+ + +L RH R HTG
Sbjct: 5   PMNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTG 46

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 54.0 bits (131), Expect = 4e-11
 Identities = 21/51 (41%), Positives = 25/51 (49%)

Query: 62  CHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
           C  C  SF  +  L  H   H+  K Y C  CG  FN   +LK HTR H+G
Sbjct: 20  CDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSG 70

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 42.8 bits (102), Expect = 7e-07
 Identities = 11/38 (28%), Positives = 13/38 (34%)

Query: 75  LNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
            + H       K Y C  C   F    +L  H   HTG
Sbjct: 5   HHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTG 42

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 55.3 bits (134), Expect = 7e-11
 Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 2/53 (3%)

Query: 62  CHLCSKSFSLQRLLNRHMKCHSDVKRYLCTF--CGKGFNDTFDLKRHTRTHTG 112
           C    + F  Q +L  HM+ H+  K + CTF  C K ++   +LK H R+HTG
Sbjct: 42  CSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTG 94

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 51.4 bits (124), Expect = 2e-09
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 5/58 (8%)

Query: 60  FACHL--CSKSFSLQRLLNRHMKCHSDVKRYLCTF--CGKGFNDTFDLKRH-TRTHTG 112
             C    C KS+S    L  H++ H+  K Y+C    C K F++  D  +H  RTH+ 
Sbjct: 68  HKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSN 125

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 51.4 bits (124), Expect = 2e-09
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 3/51 (5%)

Query: 65  CSKSFSLQRLLNRHMKC-HSDVKRYLCTF--CGKGFNDTFDLKRHTRTHTG 112
           CSK+FS      +H    HS+ K Y+C    C K + D   L++H +T  G
Sbjct: 105 CSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 51.4 bits (124), Expect = 2e-09
 Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 8/59 (13%)

Query: 62  CHLCSKSFSLQRLLNRHMKC---HSDVKRYLCTFCG-----KGFNDTFDLKRHTRTHTG 112
              CS+ F  Q  L  H+     H + K ++C + G     + F   + L  H R HTG
Sbjct: 6   WDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTG 64

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 52.5 bits (127), Expect = 1e-10
 Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)

Query: 60  FACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHT-RTHTG 112
           F C +C+++F+ Q  L RH + H++ K Y C  C + F     L RH  + H+G
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 39.4 bits (93), Expect = 1e-05
 Identities = 10/27 (37%), Positives = 15/27 (55%)

Query: 86  KRYLCTFCGKGFNDTFDLKRHTRTHTG 112
           + ++C  C + F     LKRH R+HT 
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTN 27

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 52.9 bits (128), Expect = 1e-10
 Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 5/58 (8%)

Query: 60  FACHL--CSKSFSLQRLLNRHMK-CHSDVKRYLCTF--CGKGFNDTFDLKRHTRTHTG 112
             C    C + FS ++ LN H K  H   K + C    CGK FN    LK H + H+ 
Sbjct: 8   MPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSD 65

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 42.2 bits (100), Expect = 2e-06
 Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 2/40 (5%)

Query: 60 FAC--HLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGF 97
          F+C    C KSF+ ++ L  HMK HSD + Y+C F G   
Sbjct: 39 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS 78

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 52.5 bits (127), Expect = 1e-10
 Identities = 20/53 (37%), Positives = 27/53 (50%)

Query: 60  FACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
           + C  C K+FS   +L +H + H+  K Y C  CGK F+    L  H R HT 
Sbjct: 15  YGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTS 67

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 41.7 bits (99), Expect = 2e-06
 Identities = 15/38 (39%), Positives = 19/38 (50%)

Query: 75  LNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
            +     HS  K Y C  CGK F+ +  L +H R HTG
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTG 39

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 52.8 bits (128), Expect = 2e-10
 Identities = 19/53 (35%), Positives = 24/53 (45%)

Query: 60  FACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
           + C +C K+F  Q  L  H   HS  K + C  CGKGF  +  L  H   H  
Sbjct: 46  YTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQ 98

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 52.1 bits (126), Expect = 5e-10
 Identities = 16/53 (30%), Positives = 23/53 (43%)

Query: 60  FACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
           F C  C + F+    L  H + H+D + Y C  C K F     L+ H   H+ 
Sbjct: 18  FICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSK 70

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 44.3 bits (106), Expect = 4e-07
 Identities = 12/38 (31%), Positives = 19/38 (50%)

Query: 75  LNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
            +         K ++C FCG+ F  +++L  H RTHT 
Sbjct: 5   SSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTD 42

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 51.7 bits (125), Expect = 3e-10
 Identities = 24/61 (39%), Positives = 30/61 (49%), Gaps = 3/61 (4%)

Query: 52  TGRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHT 111
             R+   R+ C  C KSFS    L++H + H+  K Y C  CGK F     L  H R HT
Sbjct: 14  RERR---RYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHT 70

Query: 112 G 112
           G
Sbjct: 71  G 71

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 44.7 bits (107), Expect = 1e-07
 Identities = 16/38 (42%), Positives = 21/38 (55%)

Query: 75  LNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
             R      + +RY C  CGK F+ + DL +H RTHTG
Sbjct: 6   SGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG 43

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 52.2 bits (126), Expect = 3e-10
 Identities = 14/54 (25%), Positives = 23/54 (42%), Gaps = 2/54 (3%)

Query: 60  FACHL--CSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHT 111
           + C    C   F+    L RH + H+  K + C  C + F+ +  L  H + H 
Sbjct: 46  YKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 50.3 bits (121), Expect = 2e-09
 Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 4/68 (5%)

Query: 49  ESTTGRKDNTRFACHL--CSKSFSLQRLLNRHMKCHSDVKRYLCTF--CGKGFNDTFDLK 104
            S    +      C    C+K ++    L  H++ H+  K Y CT+  C   F  + +L 
Sbjct: 5   SSGPDLEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELT 64

Query: 105 RHTRTHTG 112
           RH R HTG
Sbjct: 65  RHYRKHTG 72

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 53.6 bits (130), Expect = 5e-10
 Identities = 24/53 (45%), Positives = 32/53 (60%)

Query: 60  FACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
           + C  C KSFS ++ L RH + H+  K Y C  CGK F+   +L+ H RTHTG
Sbjct: 50  YKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTG 102

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 52.8 bits (128), Expect = 1e-09
 Identities = 27/53 (50%), Positives = 31/53 (58%)

Query: 60  FACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
           +AC  C KSFS    L  H + H+  K Y C  CGK F+D  DL RH RTHTG
Sbjct: 22  YACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTG 74

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 52.8 bits (128), Expect = 1e-09
 Identities = 24/53 (45%), Positives = 29/53 (54%)

Query: 60  FACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
           +AC  C KSFS    L  H + H+  K Y C  CGK F+   +L  H RTHTG
Sbjct: 106 YACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTG 158

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 52.4 bits (127), Expect = 1e-09
 Identities = 23/51 (45%), Positives = 28/51 (54%)

Query: 62  CHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
           C  C KSFS +  L+ H + H+  K Y C  CGK F+    L  H RTHTG
Sbjct: 136 CPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTG 186

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 52.4 bits (127), Expect = 1e-09
 Identities = 23/51 (45%), Positives = 28/51 (54%)

Query: 62  CHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
           C  C KSFS +  L  H + H+  K Y C  CGK F+    L+ H RTHTG
Sbjct: 80  CPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTG 130

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 43.2 bits (103), Expect = 4e-06
 Identities = 15/45 (33%), Positives = 17/45 (37%)

Query: 68  SFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
           S                 K Y C  CGK F+ +  L  H RTHTG
Sbjct: 2   SEFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTG 46

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 52.1 bits (126), Expect = 6e-10
 Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 60  FACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
           + C  C KSF+ +   +RHM  H  ++ Y C  CGK F     L  H + HTG
Sbjct: 11  YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTG 62

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 49.7 bits (120), Expect = 4e-09
 Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 2/53 (3%)

Query: 60  FACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
           + C +C K F ++  L  HMK H+ +K Y C  C K F        H    + 
Sbjct: 38  YGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSF--HRHVTSC 88

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 50.5 bits (120), Expect = 7e-10
 Identities = 14/54 (25%), Positives = 27/54 (50%)

Query: 59  RFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
           ++ C  C        +L +H++ H+DV+ Y CT+C   F    +L +H ++   
Sbjct: 1   KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 52.1 bits (126), Expect = 8e-10
 Identities = 14/56 (25%), Positives = 24/56 (42%), Gaps = 3/56 (5%)

Query: 60  FACHLCSKSFSLQRLLNRHMKC---HSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
           F C  C K +  +  L  H      +   + + C+ C + F    +L+ H  +HTG
Sbjct: 36  FECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTG 91

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 51.7 bits (125), Expect = 9e-10
 Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 1/54 (1%)

Query: 60  FACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRH-TRTHTG 112
           F C +C ++F  +  L  HM  H+    Y C+ C + F    DL+ H  + H+G
Sbjct: 67  FTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG 120

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 50.6 bits (122), Expect = 3e-09
 Identities = 14/56 (25%), Positives = 21/56 (37%), Gaps = 3/56 (5%)

Query: 60  FACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTR---THTG 112
             C  C K F  +  L  H + H+  K + C  CGK +    +L  H      +  
Sbjct: 8   VECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRS 63

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 12/31 (38%), Positives = 13/31 (41%)

Query: 82  HSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
            S      C  C K F   + LK H R HTG
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYLKVHNRKHTG 32

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 50.3 bits (121), Expect = 1e-09
 Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 2/57 (3%)

Query: 65  CSKSFSLQRLLNRHMKCHSDVKRYLCTF--CGKGFNDTFDLKRHTRTHTGKEEEEEE 119
           C K+F     L  H   H+    Y C    C K F+    LKRH + H G   ++++
Sbjct: 9   CGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDD 65

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 38.4 bits (90), Expect = 5e-05
 Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 5/49 (10%)

Query: 65  CSKSFSLQRLLNRHMKCHSDV---KRYLCTFCGKGFNDTFDLKRHTRTH 110
           C K FSL   L RH K H+     K   C+F GK +     LK     H
Sbjct: 39  CDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLY--LKHVAECH 85

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 49.8 bits (120), Expect = 2e-09
 Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 2/53 (3%)

Query: 60  FACHL--CSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTH 110
           + C    C   F+    L RH + H+  + + C  C + F+ +  L  H + H
Sbjct: 36  YHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 49.8 bits (120), Expect = 2e-09
 Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 2/56 (3%)

Query: 59  RFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCT--FCGKGFNDTFDLKRHTRTHTG 112
                 C K+++    L  H++ H+  K Y C    CG  F  + +L RH R HTG
Sbjct: 7   TCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTG 62

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 37.5 bits (88), Expect = 1e-04
 Identities = 11/31 (35%), Positives = 14/31 (45%)

Query: 82  HSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
            +         CGK +  +  LK H RTHTG
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTG 32

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 51.1 bits (123), Expect = 4e-09
 Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 7/65 (10%)

Query: 52  TGRKDNTRFACHL--CSKSFSLQRLLNRHMKCHSDVKRYLCT--FCGKGFNDTFDLKRHT 107
              K   R+ C    C  +++    L  H+  H+  K + C    C KGF     L RH+
Sbjct: 8   VVYK---RYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHS 64

Query: 108 RTHTG 112
            THTG
Sbjct: 65  LTHTG 69

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 49.5 bits (119), Expect = 2e-08
 Identities = 13/50 (26%), Positives = 19/50 (38%), Gaps = 2/50 (4%)

Query: 65  CSKSFSLQRLLNRHMKCHSDVKRYLCT--FCGKGFNDTFDLKRHTRTHTG 112
           C K F+    L RH   H+  K + C    C   F    ++K+H      
Sbjct: 50  CEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHN 99

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 49.5 bits (119), Expect = 2e-08
 Identities = 17/54 (31%), Positives = 22/54 (40%), Gaps = 2/54 (3%)

Query: 65  CSKSFSLQRLLNRHMKCHSDVKRYLCT--FCGKGFNDTFDLKRHTRTHTGKEEE 116
           C K+F     L  H   H+    Y C    C K F+    LKRH + H G   +
Sbjct: 112 CGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCK 165

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 38.0 bits (89), Expect = 3e-04
 Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 5/50 (10%)

Query: 65  CSKSFSLQRLLNRHMKCHSDVKR---YLCTFCGKGFNDTFDLKRHTRTHT 111
           C K FSL   L RH K H+         C+F GK +  T  LK     H 
Sbjct: 142 CDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTW--TLYLKHVAECHQ 189

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 45.8 bits (109), Expect = 6e-08
 Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 4/55 (7%)

Query: 60  FACHL--CSKSFSLQRLLNRHMKCHSDVKRYLCTF--CGKGFNDTFDLKRHTRTH 110
             C    C K++     L  H + H+  K + C++  C + F  + +L RH RTH
Sbjct: 18  HICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 41.2 bits (97), Expect = 3e-06
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 2/40 (5%)

Query: 75  LNRHMKCHSDVKRYLCTF--CGKGFNDTFDLKRHTRTHTG 112
            +      S ++ ++C+   CGK +  +  LK HTRTHTG
Sbjct: 5   SSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTG 44

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 46.1 bits (109), Expect = 7e-08
 Identities = 16/62 (25%), Positives = 20/62 (32%), Gaps = 9/62 (14%)

Query: 60  FACHLCSKSFSLQRLLNRHM-KCHSDVKRY--------LCTFCGKGFNDTFDLKRHTRTH 110
                C ++FS    L  H+   H               C   GK F   + L  H R H
Sbjct: 26  RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVH 85

Query: 111 TG 112
           TG
Sbjct: 86  TG 87

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 44.1 bits (105), Expect = 1e-07
 Identities = 15/36 (41%), Positives = 17/36 (47%)

Query: 78  HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGK 113
                +D K Y C  CGK F   F L RH + HT K
Sbjct: 3   SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRK 38

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 43.0 bits (101), Expect = 4e-07
 Identities = 12/31 (38%), Positives = 16/31 (51%)

Query: 82  HSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
               K+  C  CGK F D + L RH  +H+G
Sbjct: 7   GRTRKQVACEICGKIFRDVYHLNRHKLSHSG 37

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 40.3 bits (94), Expect = 5e-06
 Identities = 14/45 (31%), Positives = 18/45 (40%)

Query: 49 ESTTGRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFC 93
           S +  +   + AC +C K F     LNRH   HS  K Y     
Sbjct: 2  SSGSSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 6e-07
 Identities = 15/36 (41%), Positives = 19/36 (52%)

Query: 77  RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                 S  K Y+C +CGK F  + +L RH R HTG
Sbjct: 2   SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTG 37

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 44.1 bits (103), Expect = 7e-07
 Identities = 14/53 (26%), Positives = 19/53 (35%), Gaps = 1/53 (1%)

Query: 54  RKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRH 106
           R       C  CS  F    L   H     + K+  C  C + F  +F + RH
Sbjct: 37  RLCRNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSIWRH 88

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 39.9 bits (92), Expect = 2e-05
 Identities = 10/59 (16%), Positives = 19/59 (32%), Gaps = 2/59 (3%)

Query: 55  KDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGK 113
           ++   + C LC+   S       H +   +    +C +C   F      + H      K
Sbjct: 12  ENKEVYQCRLCNAKLSSLLEQGSHERLCRN--AAVCPYCSLRFFSPELKQEHESKCEYK 68

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 42.1 bits (100), Expect = 8e-07
 Identities = 13/35 (37%), Positives = 13/35 (37%)

Query: 78  HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                   K Y C  CG  F     LK H R HTG
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTG 36

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 41.7 bits (99), Expect = 1e-06
 Identities = 15/36 (41%), Positives = 18/36 (50%)

Query: 77  RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                 + +K Y+C  CGK F     L  HTRTHTG
Sbjct: 2   SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTG 37

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 1e-06
 Identities = 14/35 (40%), Positives = 16/35 (45%)

Query: 78  HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                S  K Y C  CGKG+N   +L  H R H G
Sbjct: 3   SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMG 37

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 41.7 bits (99), Expect = 1e-06
 Identities = 11/35 (31%), Positives = 12/35 (34%)

Query: 78  HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                   K Y C  CG  F     L+ H   HTG
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTG 36

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 1e-06
 Identities = 13/36 (36%), Positives = 14/36 (38%)

Query: 77  RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                 S  K + C  CGK F     L  H R HTG
Sbjct: 2   SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTG 37

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 2e-06
 Identities = 15/36 (41%), Positives = 17/36 (47%)

Query: 77  RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                 +  K Y C  CGK F+ T  L RH R HTG
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTG 37

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 2e-06
 Identities = 15/35 (42%), Positives = 16/35 (45%)

Query: 78  HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                S  K Y C  CGKG+    DL  H R HTG
Sbjct: 3   SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTG 37

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 41.5 bits (98), Expect = 2e-06
 Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 2/37 (5%)

Query: 78  HMKCHSDVKRYLCTF--CGKGFNDTFDLKRHTRTHTG 112
                +  K + CT+  CG  F+ + +L RH R+H+G
Sbjct: 3   SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSG 39

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 41.4 bits (98), Expect = 2e-06
 Identities = 14/36 (38%), Positives = 14/36 (38%)

Query: 77  RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                 S  K Y C  CGK F     L  H RTH G
Sbjct: 2   SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAG 37

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 2e-06
 Identities = 13/36 (36%), Positives = 15/36 (41%)

Query: 77  RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                 +  K Y C  CGK F     L+ H R HTG
Sbjct: 2   SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTG 37

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 2e-06
 Identities = 14/35 (40%), Positives = 18/35 (51%)

Query: 78  HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                +  K Y C  CGKG+N  F+L  H + HTG
Sbjct: 3   SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTG 37

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 2e-06
 Identities = 13/36 (36%), Positives = 16/36 (44%)

Query: 77  RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                 + VK Y+C  CGK F+    L  H   HTG
Sbjct: 2   SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTG 37

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.9 bits (97), Expect = 2e-06
 Identities = 13/36 (36%), Positives = 17/36 (47%)

Query: 77  RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                 +  K + C+ C K FN   +L  H RTHTG
Sbjct: 2   SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTG 37

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.0 bits (97), Expect = 2e-06
 Identities = 12/35 (34%), Positives = 14/35 (40%)

Query: 78  HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                S  K + C  CGK F     L+ H R H G
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMG 37

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 2e-06
 Identities = 11/35 (31%), Positives = 16/35 (45%)

Query: 78  HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                +  K Y+C  CGK F    +L +H + HT 
Sbjct: 3   SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTK 37

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 3e-06
 Identities = 12/36 (33%), Positives = 16/36 (44%)

Query: 77  RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                 +  K + C  CGK +N    L +H R HTG
Sbjct: 2   SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTG 37

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 3e-06
 Identities = 13/36 (36%), Positives = 14/36 (38%)

Query: 77  RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                 +  K Y C  CGK F     L  H R HTG
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTG 37

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 3e-06
 Identities = 13/35 (37%), Positives = 17/35 (48%)

Query: 78  HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                +  K + C  CGK F+D   L +H R HTG
Sbjct: 3   SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTG 37

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 3e-06
 Identities = 13/36 (36%), Positives = 17/36 (47%)

Query: 77  RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                 +  K Y C+ CGK F+    L  H RTH+G
Sbjct: 2   SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSG 37

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.9 bits (97), Expect = 3e-06
 Identities = 13/36 (36%), Positives = 14/36 (38%)

Query: 77  RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                 +  K Y C  CGK F     L RH   HTG
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTG 37

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.9 bits (97), Expect = 3e-06
 Identities = 13/36 (36%), Positives = 14/36 (38%)

Query: 77  RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                 S  K + C  CGK F     L  H R HTG
Sbjct: 2   SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTG 37

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 3e-06
 Identities = 13/36 (36%), Positives = 19/36 (52%)

Query: 77  RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                 +  + Y+CT CGK F D  +L +H + HTG
Sbjct: 2   SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTG 37

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 4e-06
 Identities = 14/36 (38%), Positives = 14/36 (38%)

Query: 77  RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                 S  K Y C  CGK F     L  H R HTG
Sbjct: 2   SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTG 37

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 40.2 bits (95), Expect = 4e-06
 Identities = 12/36 (33%), Positives = 16/36 (44%)

Query: 77  RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                 +  K + C  CGKGF+    L  H + HTG
Sbjct: 2   SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTG 37

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 4e-06
 Identities = 13/36 (36%), Positives = 14/36 (38%)

Query: 77  RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                 +  K Y C  CGK F     L RH   HTG
Sbjct: 2   SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTG 37

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 4e-06
 Identities = 14/36 (38%), Positives = 16/36 (44%)

Query: 77  RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                 S  K Y C+ CGK F+    L  H R HTG
Sbjct: 2   SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTG 37

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 4e-06
 Identities = 11/35 (31%), Positives = 14/35 (40%)

Query: 78  HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                +  K + C  CGK F     L RH+  HT 
Sbjct: 3   SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTA 37

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 40.2 bits (95), Expect = 5e-06
 Identities = 13/36 (36%), Positives = 16/36 (44%)

Query: 77  RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                 S  K + C  CG+GF     L +H R HTG
Sbjct: 2   SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTG 37

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 5e-06
 Identities = 13/36 (36%), Positives = 14/36 (38%)

Query: 77  RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                 S  K + C  CGK F     L  H R HTG
Sbjct: 2   SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTG 37

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 39.8 bits (94), Expect = 6e-06
 Identities = 13/36 (36%), Positives = 17/36 (47%)

Query: 77  RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                 + VK Y C+ C K F+    L  H R+HTG
Sbjct: 2   SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTG 37

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 6e-06
 Identities = 14/35 (40%), Positives = 16/35 (45%)

Query: 78  HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                +  K Y+C  CGK F     L RH R HTG
Sbjct: 3   SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTG 37

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 39.8 bits (94), Expect = 6e-06
 Identities = 14/35 (40%), Positives = 15/35 (42%)

Query: 78  HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                +  K Y C  CGKGF    DL  H   HTG
Sbjct: 3   SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTG 37

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 6e-06
 Identities = 14/36 (38%), Positives = 15/36 (41%)

Query: 77  RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                 +  K Y C  CGK F     L RH R HTG
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTG 37

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 39.8 bits (94), Expect = 6e-06
 Identities = 12/36 (33%), Positives = 15/36 (41%)

Query: 77  RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                 +  + Y C  CGK F     L  H R+HTG
Sbjct: 2   SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTG 37

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 39.8 bits (94), Expect = 6e-06
 Identities = 12/35 (34%), Positives = 15/35 (42%)

Query: 78  HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                S  K + C  CGKGF        H R+H+G
Sbjct: 3   SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSG 37

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 6e-06
 Identities = 12/36 (33%), Positives = 15/36 (41%)

Query: 77  RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                 +  + Y C+ CGK F     L  H R HTG
Sbjct: 2   SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTG 37

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 39.9 bits (94), Expect = 6e-06
 Identities = 12/36 (33%), Positives = 15/36 (41%)

Query: 77  RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                 +  K Y C  CGK F     L +H R H+G
Sbjct: 2   SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSG 37

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 6e-06
 Identities = 10/35 (28%), Positives = 12/35 (34%)

Query: 78  HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                S  + Y C  CGK F     L  H + H  
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFR 37

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 6e-06
 Identities = 12/36 (33%), Positives = 14/36 (38%)

Query: 77  RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                 +  K Y C  CGK F+    L  H   HTG
Sbjct: 2   SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTG 37

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 39.9 bits (94), Expect = 7e-06
 Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 1/41 (2%)

Query: 60 FACHLCSKSFSLQRLLNRHMKC-HSDVKRYLCTFCGKGFND 99
          + C  C K FS    LN H+K  H+  + + C     G + 
Sbjct: 13 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 37.9 bits (89), Expect = 4e-05
 Identities = 13/36 (36%), Positives = 16/36 (44%), Gaps = 1/36 (2%)

Query: 78  HMKCHSDVKRYLCTFCGKGFNDTFDLKRHT-RTHTG 112
                S  K Y+C  CGKGF+    L  H  + HT 
Sbjct: 3   SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTS 38

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 7e-06
 Identities = 12/35 (34%), Positives = 16/35 (45%)

Query: 78  HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                +  K Y C+ CGK F     L+ H + HTG
Sbjct: 3   SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTG 37

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 7e-06
 Identities = 13/36 (36%), Positives = 16/36 (44%)

Query: 77  RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                 +  K Y C  CGK F    +L +H R HTG
Sbjct: 2   SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTG 37

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.5 bits (93), Expect = 8e-06
 Identities = 13/35 (37%), Positives = 15/35 (42%)

Query: 78  HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                +  K Y C  CGK F D     +H R HTG
Sbjct: 3   SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTG 37

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 39.4 bits (93), Expect = 8e-06
 Identities = 14/36 (38%), Positives = 17/36 (47%)

Query: 77  RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                 +  K Y C  CGK F+ T  L +H R HTG
Sbjct: 2   SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTG 37

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 39.5 bits (93), Expect = 8e-06
 Identities = 13/35 (37%), Positives = 14/35 (40%)

Query: 78  HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                   K Y C  CGK F+    L  H R HTG
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTG 36

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 39.4 bits (93), Expect = 8e-06
 Identities = 13/36 (36%), Positives = 17/36 (47%)

Query: 77  RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                 +  KRY C  CGK F+    L +H + HTG
Sbjct: 2   SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTG 37

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 8e-06
 Identities = 12/36 (33%), Positives = 15/36 (41%)

Query: 77  RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                 +  K Y C  CGK F  +  L +H R HT 
Sbjct: 2   SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQ 37

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 9e-06
 Identities = 12/36 (33%), Positives = 16/36 (44%)

Query: 77  RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                 +  K Y C+ CGK F+    L  H R H+G
Sbjct: 2   SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSG 37

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 9e-06
 Identities = 14/35 (40%), Positives = 15/35 (42%)

Query: 78  HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                +  K Y C  CGK F     L RH R HTG
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTG 37

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 9e-06
 Identities = 12/36 (33%), Positives = 15/36 (41%)

Query: 77  RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                 +    Y C  CGK F+  + L  H RTH G
Sbjct: 2   SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAG 37

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 1e-05
 Identities = 12/36 (33%), Positives = 15/36 (41%)

Query: 77  RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                 +  K Y C  C K F     L +H +THTG
Sbjct: 2   SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTG 37

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 1e-05
 Identities = 11/36 (30%), Positives = 16/36 (44%)

Query: 77  RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                 +  + + C  CGK F  +  L +H R HTG
Sbjct: 2   SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTG 37

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.1 bits (92), Expect = 1e-05
 Identities = 12/36 (33%), Positives = 15/36 (41%)

Query: 77  RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                 +  K + C  CGK F+    L  H R HTG
Sbjct: 2   SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTG 37

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 1e-05
 Identities = 13/35 (37%), Positives = 14/35 (40%)

Query: 78  HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                +  K Y C  CGK F     L RH   HTG
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTG 37

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 1e-05
 Identities = 12/36 (33%), Positives = 16/36 (44%)

Query: 77  RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                 +  K Y C+ CGK F     L  H ++HTG
Sbjct: 2   SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTG 37

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 1e-05
 Identities = 12/35 (34%), Positives = 16/35 (45%)

Query: 78  HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                +  K Y C  CGK F+    L +H R H+G
Sbjct: 3   SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSG 37

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 1e-05
 Identities = 11/35 (31%), Positives = 14/35 (40%)

Query: 78  HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                +  + Y C+ CGK F     L  H R H G
Sbjct: 3   SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRG 37

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.1 bits (92), Expect = 1e-05
 Identities = 12/35 (34%), Positives = 17/35 (48%)

Query: 78  HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                   K Y C+ CGK F+ ++ L +H  THT 
Sbjct: 3   SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTR 37

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.1 bits (92), Expect = 1e-05
 Identities = 9/35 (25%), Positives = 15/35 (42%)

Query: 78  HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                +  K + C  CG  F+ +  L +H R+H  
Sbjct: 3   SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHER 37

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 39.1 bits (92), Expect = 1e-05
 Identities = 11/35 (31%), Positives = 14/35 (40%)

Query: 78  HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                + V  Y C+ C K F+    L  H R HT 
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTR 37

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.1 bits (92), Expect = 1e-05
 Identities = 12/36 (33%), Positives = 15/36 (41%)

Query: 77  RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                 +  K Y C+ CGK F     L  H + HTG
Sbjct: 2   SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTG 37

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.1 bits (92), Expect = 1e-05
 Identities = 13/35 (37%), Positives = 15/35 (42%)

Query: 78  HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                +  K Y C+ CGK F     L  H R HTG
Sbjct: 3   SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTG 37

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 39.1 bits (92), Expect = 1e-05
 Identities = 10/36 (27%), Positives = 15/36 (41%)

Query: 77  RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                    + + C+ CGK F    +  +H R HTG
Sbjct: 2   SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTG 37

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 1e-05
 Identities = 13/36 (36%), Positives = 16/36 (44%)

Query: 77  RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                 +  K Y C  CGK F D  +L  H + HTG
Sbjct: 2   SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTG 37

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 39.0 bits (92), Expect = 1e-05
 Identities = 14/35 (40%), Positives = 16/35 (45%)

Query: 78  HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                +  K Y C  C K FN   +L  H RTHTG
Sbjct: 3   SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTG 37

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 38.7 bits (91), Expect = 2e-05
 Identities = 8/35 (22%), Positives = 11/35 (31%)

Query: 78  HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                   K + C  C   F+    L+ H   H G
Sbjct: 3   SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVG 37

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 38.6 bits (91), Expect = 2e-05
 Identities = 12/36 (33%), Positives = 16/36 (44%)

Query: 77  RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                 +  K + C  CGK F+ +  L  H R HTG
Sbjct: 2   SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTG 37

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 2e-05
 Identities = 11/35 (31%), Positives = 14/35 (40%)

Query: 78  HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                +  K + C  C K F  +  L  H R HTG
Sbjct: 3   SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTG 37

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 2e-05
 Identities = 15/35 (42%), Positives = 17/35 (48%)

Query: 78  HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                +  K Y C  CGK F+ T  L RH R HTG
Sbjct: 3   SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTG 37

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 2e-05
 Identities = 12/36 (33%), Positives = 14/36 (38%)

Query: 77  RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                 +  K Y C  CGK F     L  H  TH+G
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSG 37

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 2e-05
 Identities = 11/35 (31%), Positives = 15/35 (42%)

Query: 78  HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                +  K Y C  C K F+    L +H R H+G
Sbjct: 3   SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSG 37

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 2e-05
 Identities = 13/35 (37%), Positives = 14/35 (40%)

Query: 78  HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                +  K Y C  CGK F     L RH   HTG
Sbjct: 3   SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTG 37

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 38.7 bits (91), Expect = 2e-05
 Identities = 13/35 (37%), Positives = 16/35 (45%)

Query: 78  HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                +  K + CT CGK F    +L  H R HTG
Sbjct: 3   SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTG 37

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 2e-05
 Identities = 12/35 (34%), Positives = 13/35 (37%)

Query: 78  HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                +  K Y C  C K F     L  H R HTG
Sbjct: 3   SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTG 37

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 2e-05
 Identities = 12/35 (34%), Positives = 14/35 (40%)

Query: 78  HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                +  K Y C  CGK F    +L  H   HTG
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTG 37

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 2e-05
 Identities = 10/35 (28%), Positives = 16/35 (45%)

Query: 78  HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                +    ++C+ CGK F    +L  H + HTG
Sbjct: 3   SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTG 37

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 2e-05
 Identities = 13/36 (36%), Positives = 14/36 (38%)

Query: 77  RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                 S  K Y C  C K F     L +H R HTG
Sbjct: 2   SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTG 37

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 2e-05
 Identities = 12/36 (33%), Positives = 13/36 (36%)

Query: 77  RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                 +  K   CT CGK F     L  H RTH  
Sbjct: 2   SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVD 37

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 2e-05
 Identities = 11/36 (30%), Positives = 15/36 (41%)

Query: 77  RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                 +  K Y C  CGK F  +  L +H   H+G
Sbjct: 2   SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSG 37

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 40.3 bits (93), Expect = 2e-05
 Identities = 18/77 (23%), Positives = 26/77 (33%), Gaps = 3/77 (3%)

Query: 37  PPPPTRVEPEKVESTTGRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKG 96
             P    E   +      K  ++F C LC   FS    L +H++        +C  C K 
Sbjct: 52  HNPQLLDESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTE--HTKVCPVCKKE 109

Query: 97  FNDTFDLKRHT-RTHTG 112
           F  T     H  + H  
Sbjct: 110 FTSTDSALDHVCKKHNI 126

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 3e-05
 Identities = 15/35 (42%), Positives = 16/35 (45%)

Query: 78  HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                S  K Y C  CGK F+    L  H RTHTG
Sbjct: 3   SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTG 37

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A Length = 29

 Score = 37.7 bits (88), Expect = 3e-05
 Identities = 10/27 (37%), Positives = 15/27 (55%)

Query: 86  KRYLCTFCGKGFNDTFDLKRHTRTHTG 112
           + ++C  C + F     LKRH R+HT 
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTN 27

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 3e-05
 Identities = 11/36 (30%), Positives = 14/36 (38%)

Query: 77  RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                 S  + + C  CGKGF     L  H R H+ 
Sbjct: 2   SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSR 37

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 38.5 bits (89), Expect = 3e-05
 Identities = 11/55 (20%), Positives = 15/55 (27%), Gaps = 7/55 (12%)

Query: 60  FACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKE 114
             C  C   F             S  K  +C  C K       L +     +GK+
Sbjct: 19  QKCSKCGIIFI-------RRSTLSRRKTPMCEKCRKDSCQEAALNKDEGNESGKK 66

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A Length = 31

 Score = 37.6 bits (88), Expect = 3e-05
 Identities = 14/29 (48%), Positives = 21/29 (72%), Gaps = 2/29 (6%)

Query: 86  KRYLCTF--CGKGFNDTFDLKRHTRTHTG 112
           + ++CT+  CGK F  + +L+RH RTHTG
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTHTG 29

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 3e-05
 Identities = 13/35 (37%), Positives = 16/35 (45%)

Query: 78  HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                   K Y C  CGK F+ +  L+ H R HTG
Sbjct: 3   SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTG 37

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 37.5 bits (88), Expect = 5e-05
 Identities = 11/35 (31%), Positives = 15/35 (42%)

Query: 78  HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                +    Y C  CGK F+    L  H +TH+G
Sbjct: 3   SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSG 37

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 5e-05
 Identities = 12/36 (33%), Positives = 15/36 (41%)

Query: 77  RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                 +  K + CT CGK F     L  H + HTG
Sbjct: 2   SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTG 37

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 37.3 bits (87), Expect = 6e-05
 Identities = 10/35 (28%), Positives = 12/35 (34%)

Query: 78  HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
                     YLC  CGK F     L  H R+ + 
Sbjct: 2   SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQ 36

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 37.2 bits (87), Expect = 8e-05
 Identities = 14/36 (38%), Positives = 15/36 (41%), Gaps = 1/36 (2%)

Query: 78  HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTR-THTG 112
                +  K Y C  CGK F     L RH R  HTG
Sbjct: 3   SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTG 38

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 36.7 bits (86), Expect = 9e-05
 Identities = 10/31 (32%), Positives = 14/31 (45%)

Query: 82  HSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
            S  K + C+ C K F+    L  H +TH  
Sbjct: 5   SSGEKPFGCSCCEKAFSSKSYLLVHQQTHAE 35

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 36.8 bits (85), Expect = 9e-05
 Identities = 9/41 (21%), Positives = 14/41 (34%)

Query: 77  RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEE 117
                 +    + C+ C + F     L +H RTH  K    
Sbjct: 2   SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPS 42

>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_V Length = 1275

 Score = 39.5 bits (91), Expect = 1e-04
 Identities = 12/94 (12%), Positives = 18/94 (19%), Gaps = 2/94 (2%)

Query: 19  HGVKNPLANHDVSAIIPPPPPPTRVEPEKVESTTGRKD--NTRFACHLCSKSFSLQRLLN 76
               +        +               V++  G      +       S   S      
Sbjct: 110 AKDTDKSKAQVTYSDTGINNANELSRSGNVDNEGGSNQKPMSTRIAEATSAIVSKHPARV 169

Query: 77  RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTH 110
                 S    Y C  C        DL  H  +H
Sbjct: 170 GLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 36.1 bits (84), Expect = 2e-04
 Identities = 12/32 (37%), Positives = 16/32 (50%)

Query: 82  HSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGK 113
            S  K Y C  C + F+D   L +H + HT K
Sbjct: 5   SSGEKPYSCAECKETFSDNNRLVQHQKMHTVK 36

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 35.6 bits (83), Expect = 2e-04
 Identities = 14/33 (42%), Positives = 15/33 (45%)

Query: 80  KCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
              S    Y C+ CGK FN    L  H RTH G
Sbjct: 3   SGSSGENPYECSECGKAFNRKDQLISHQRTHAG 35

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens} Length = 30

 Score = 35.1 bits (80), Expect = 4e-04
 Identities = 13/30 (43%), Positives = 19/30 (63%)

Query: 85  VKRYLCTFCGKGFNDTFDLKRHTRTHTGKE 114
           +K Y+C  C + F D   L+RH R HTG++
Sbjct: 1   MKPYVCIHCQRQFADPGALQRHVRIHTGEK 30

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens} Length = 37

 Score = 34.6 bits (80), Expect = 4e-04
 Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 2/29 (6%)

Query: 86  KRYLCTF--CGKGFNDTFDLKRHTRTHTG 112
           K+++C    CGK +  T  L+ H R HTG
Sbjct: 7   KQHICHIQGCGKVYGKTSHLRAHLRWHTG 35

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 34.9 bits (81), Expect = 4e-04
 Identities = 12/27 (44%), Positives = 13/27 (48%)

Query: 86  KRYLCTFCGKGFNDTFDLKRHTRTHTG 112
           + Y C  CGK F     L  H R HTG
Sbjct: 9   RVYECQECGKSFRQKGSLTLHERIHTG 35

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 36.7 bits (84), Expect = 5e-04
 Identities = 13/61 (21%), Positives = 19/61 (31%), Gaps = 1/61 (1%)

Query: 62  CHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRH-TRTHTGKEEEEEED 120
            +    S   +R L          K   C +CG  F    DL  H  +T   ++      
Sbjct: 55  NNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVSGPSS 114

Query: 121 G 121
           G
Sbjct: 115 G 115

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 34.2 bits (79), Expect = 7e-04
 Identities = 7/33 (21%), Positives = 15/33 (45%)

Query: 78  HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTH 110
             +  + +K + C  C + F+ +  L  H + H
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	134
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.87
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.87
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.84
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.84
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.83
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.82
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.82
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.81
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.81
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.81
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.81
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.8
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.79
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.78
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.78
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.77
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.76
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.76
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.75
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.75
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.75
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.75
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.75
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.75
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.74
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.74
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.73
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.72
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.72
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.71
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.71
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.71
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.7
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.7
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.69
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.69
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.69
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.68
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.66
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.66
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.66
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.65
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.65
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.64
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.64
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.64
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.63
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.63
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.62
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.61
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.61
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.6
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.6
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.6
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.58
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.57
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.56
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.56
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.56
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.56
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.56
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.56
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.56
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.55
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.55
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.55
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.55
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.55
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.55
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.55
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.55
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.55
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.55
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.55
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.55
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.55
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.55
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.55
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.55
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.55
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.55
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.55
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.55
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.55
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.55
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.54
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.54
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.54
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.54
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.54
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.54
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.54
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.54
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.54
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.54
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.54
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.54
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.54
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.54
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.53
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.53
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.53
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.53
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.53
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.53
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.53
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.52
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.52
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.52
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.52
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.52
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.52
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.52
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.52
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.52
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.52
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.52
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.52
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.51
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.51
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.51
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.51
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.51
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.51
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.51
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.51
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.51
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.5
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.5
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.5
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.5
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.5
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.5
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.5
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.5
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.49
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.49
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.49
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.49
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.48
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.48
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.48
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.48
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.48
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.47
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.47
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.47
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.47
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.47
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.47
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.47
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.46
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.46
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.46
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.46
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.46
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.45
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.45
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.45
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.44
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.44
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.44
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.44
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.43
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.43
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.42
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.42
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.42
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.42
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.41
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.4
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.4
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.4
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.39
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.39
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.38
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.38
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.36
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.35
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.33
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.32
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.31
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.31
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.3
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.3
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.3
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.3
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.3
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.3
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.3
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.3
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.29
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.29
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.29
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.29
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.29
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.29
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.29
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.29
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.29
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.29
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.29
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.29
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.29
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.28
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.28
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.28
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.28
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.28
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.28
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.28
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.27
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.27
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.27
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.27
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.27
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.27
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	99.27
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.27
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.27
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.27
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.27
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.26
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.26
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.26
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.26
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.26
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.26
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.26
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.26
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.25
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.25
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.24
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.24
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.24
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.24
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.24
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.23
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	99.23
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.2
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.2
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.19
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.19
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.18
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.18
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	99.18
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.17
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.17
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.17
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.17
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	99.17
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.16
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.16
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.16
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.16
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.16
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.16
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.16
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.16
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.15
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.15
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.15
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.15
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.14
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	99.14
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.14
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.13
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.13
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.13
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.13
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.13
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.13
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	99.13
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.13
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.13
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.12
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.12
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.12
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.12
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.12
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.12
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.12
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.11
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.11
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	99.11
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.1
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.1
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.1
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	99.1
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.1
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.09
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.09
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.08
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.07
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.06
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.06
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.06
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.06
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.06
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.05
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.04
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	99.04
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.04
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	99.02
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.02
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.01
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.01
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	99.0
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.99
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.98
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.96
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.95
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	98.94
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.92
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.89
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.88
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.86
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.85
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.84
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.84
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.83
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.83
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.83
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.82
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.79
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.79
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.79
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.78
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.77
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.77
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.76
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.75
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	98.22
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.74
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.73
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.73
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	98.19
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.71
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.71
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	98.7
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.69
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.68
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.68
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.67
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.67
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.67
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.66
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.66
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.66
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.64
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.64
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.64
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.62
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.59
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.58
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.56
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.56
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.56
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.54
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.54
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.54
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.53
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.92
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.92
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.51
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.5
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.86
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.45
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.42
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.4
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	98.37
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.72
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.27
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	97.45
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	97.12
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	96.89
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.7
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	96.49
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	96.43
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	96.16
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	95.03
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	94.28
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	93.47
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	93.34
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	92.41
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	92.28
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	92.07
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	91.72
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	88.2
2k5c_A	95	Uncharacterized protein PF0385; structural genomic	87.96
2yuc_A	76	TNF receptor-associated factor 4; ZF-TRAF, cystein	87.0
2jvx_A	28	NF-kappa-B essential modulator; CCHC classical zin	86.48
2gmg_A	105	Hypothetical protein PF0610; winged-helix like pro	86.09
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	85.41
1wir_A	121	Protein arginine N-methyltransferase 3; C2H2 zinc	85.2
2yrk_A	55	Zinc finger homeobox protein 4; structure genomics	84.85
1yuz_A	202	Nigerythrin; rubrythrin, rubredoxin, hemerythrin,	84.25
2djr_A	76	Zinc finger BED domain-containing protein 2; C2H2	84.12
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	83.05
2yu4_A	94	E3 SUMO-protein ligase NSE2; SP-ring domain, struc	81.79
2k9h_A	57	Glycoprotein; hantavirus, zinc finger, CCHC, metal	80.7
1wir_A	121	Protein arginine N-methyltransferase 3; C2H2 zinc	80.38

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.87  E-value=2.4e-23  Score=128.12  Aligned_cols=79  Identities=23%  Similarity=0.429  Sum_probs=73.8

Q ss_pred             CCCCCceeccccccccCChHHHHHHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccCCCcccCcccee
Q psy691           54 RKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDGKTNVLTTEYLV  132 (134)
Q Consensus        54 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~~~~~~l~  132 (134)
                      ..++++|.|++|++.|.....|..|+++|.+++||.|..|++.|.....|..|+++|+++++|.|+.|+..|.+...|.
T Consensus        17 h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~   95 (133)
T 2lt7_A           17 VDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMS   95 (133)
T ss_dssp             ETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHHH
T ss_pred             cCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHHHHH
Confidence            3567889999999999999999999999999999999999999999999999999999999999999999999887663

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.87  E-value=1.1e-22  Score=108.59  Aligned_cols=58  Identities=31%  Similarity=0.647  Sum_probs=55.7

Q ss_pred             CCceeccccccccCChHHHHHHHHHcCCCCceecccccccccChhhHHHHHhHhcCCC
Q psy691           57 NTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKE  114 (134)
Q Consensus        57 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~  114 (134)
                      ++||.|.+|++.|.....|..|+++|++++||.|..|++.|...+.|.+|+++|+||+
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            5799999999999999999999999999999999999999999999999999999975

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.84  E-value=8.5e-21  Score=112.11  Aligned_cols=78  Identities=23%  Similarity=0.473  Sum_probs=73.0

Q ss_pred             CCCCceeccccccccCChHHHHHHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccCCCcccCcccee
Q psy691           55 KDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDGKTNVLTTEYLV  132 (134)
Q Consensus        55 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~~~~~~l~  132 (134)
                      ..+++|.|.+|++.|.....|..|++.|.++++|.|.+|++.|.....|..|+++|+++++|.|..|+..|.+...|.
T Consensus        13 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~   90 (106)
T 2ee8_A           13 KTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLA   90 (106)
T ss_dssp             CCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHH
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHH
Confidence            345689999999999999999999999999999999999999999999999999999999999999999999877663

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.84  E-value=9.3e-21  Score=105.99  Aligned_cols=66  Identities=35%  Similarity=0.655  Sum_probs=62.3

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCcccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEE  118 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c  118 (134)
                      ...++++|.|.+|++.|.....|..|++.|.++++|.|.+|++.|.....|.+|+++|++++||.|
T Consensus        12 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           12 QQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             cCCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            344567899999999999999999999999999999999999999999999999999999999988

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.83  E-value=6.4e-21  Score=110.70  Aligned_cols=78  Identities=27%  Similarity=0.494  Sum_probs=73.2

Q ss_pred             CCCCceeccccccccCChHHHHHHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccCCCcccCcccee
Q psy691           55 KDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDGKTNVLTTEYLV  132 (134)
Q Consensus        55 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~~~~~~l~  132 (134)
                      .++++|.|.+|++.|.....|..|++.|.++++|.|..|++.|.....|..|+++|+++++|.|..|+..|.+...|.
T Consensus         4 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   81 (96)
T 2dmd_A            4 GSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLT   81 (96)
T ss_dssp             CCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHH
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHH
Confidence            456789999999999999999999999999999999999999999999999999999999999999999998877663

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.82  E-value=1.8e-20  Score=108.60  Aligned_cols=78  Identities=28%  Similarity=0.457  Sum_probs=72.9

Q ss_pred             CCCCceeccccccccCChHHHHHHHHHcCCCCceecccccccccChhhHHHHHhHhcCC--CccccccCCCcccCcccee
Q psy691           55 KDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGK--EEEEEEDGKTNVLTTEYLV  132 (134)
Q Consensus        55 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~--~~~~c~~~~~~~~~~~~l~  132 (134)
                      .++++|.|.+|++.|.....|..|++.|.++++|.|..|++.|.....|..|++.|+++  ++|.|..|+..|.+...|.
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~   82 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLN   82 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHH
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHH
Confidence            45678999999999999999999999999999999999999999999999999999997  9999999999999887663

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.82  E-value=3.4e-20  Score=103.99  Aligned_cols=71  Identities=30%  Similarity=0.519  Sum_probs=66.3

Q ss_pred             CCCCceeccc--cccccCChHHHHHHHH-HcCCCCceeccc--ccccccChhhHHHHHhHhcCCCccccccCCCcc
Q psy691           55 KDNTRFACHL--CSKSFSLQRLLNRHMK-CHSDVKRYLCTF--CGKGFNDTFDLKRHTRTHTGKEEEEEEDGKTNV  125 (134)
Q Consensus        55 ~~~~~~~C~~--C~~~f~~~~~l~~H~~-~h~~~k~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~  125 (134)
                      .++++|.|..  |++.|.....|..|++ .|.++++|.|..  |++.|.....|.+|+++|+++++|.|..|++.|
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F   78 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS   78 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCC
Confidence            3456799987  9999999999999999 699999999999  999999999999999999999999999888877

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.81  E-value=3.4e-20  Score=108.92  Aligned_cols=73  Identities=19%  Similarity=0.278  Sum_probs=65.8

Q ss_pred             cCCCCCCCceeccccccccCChHHHHHHHH-Hc---CCCCceecccccccccChhhHHHH-HhHhcCCCccccccCCC
Q psy691           51 TTGRKDNTRFACHLCSKSFSLQRLLNRHMK-CH---SDVKRYLCTFCGKGFNDTFDLKRH-TRTHTGKEEEEEEDGKT  123 (134)
Q Consensus        51 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h---~~~k~~~C~~C~~~f~~~~~l~~H-~~~h~~~~~~~c~~~~~  123 (134)
                      .....++++|.|.+|++.|.....|..|++ .|   .+++||.|..|++.|.....|..| +++|+|++||.|..++.
T Consensus        10 ~~~~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~~   87 (102)
T 2ghf_A           10 QQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVKR   87 (102)
T ss_dssp             TTCCCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECCC
T ss_pred             cccCCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCcccC
Confidence            345677889999999999999999999998 49   668999999999999999999999 89999999999976544

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.81  E-value=1.2e-20  Score=106.48  Aligned_cols=74  Identities=34%  Similarity=0.679  Sum_probs=70.4

Q ss_pred             ceeccccccccCChHHHHHHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccCCCcccCcccee
Q psy691           59 RFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDGKTNVLTTEYLV  132 (134)
Q Consensus        59 ~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~~~~~~l~  132 (134)
                      +|.|.+|++.|.....|..|++.|.++++|.|..|++.|.....|..|+++|+++++|.|..|+..|.+...|.
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   74 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLI   74 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHH
Confidence            58999999999999999999999999999999999999999999999999999999999999999999887663

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.81  E-value=2.6e-20  Score=110.77  Aligned_cols=78  Identities=27%  Similarity=0.495  Sum_probs=73.1

Q ss_pred             CCCCCceeccccccccCChHHHHHHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccCCCcccCcccee
Q psy691           54 RKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDGKTNVLTTEYLV  132 (134)
Q Consensus        54 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~~~~~~l~  132 (134)
                      ..++++|.| .|++.|.....|..|++.|.++++|.|..|++.|.....|.+|+++|+++++|.|..|+..|.+...|.
T Consensus         5 h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (110)
T 2csh_A            5 SSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFH   82 (110)
T ss_dssp             CCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHH
T ss_pred             CCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHH
Confidence            456788999 999999999999999999999999999999999999999999999999999999999999999877663

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.81  E-value=6.6e-20  Score=101.75  Aligned_cols=63  Identities=33%  Similarity=0.685  Sum_probs=59.6

Q ss_pred             CCCCCceeccccccccCChHHHHHHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCcc
Q psy691           54 RKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEE  116 (134)
Q Consensus        54 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  116 (134)
                      ..+.++|.|.+|++.|.....|..|++.|.++++|.|..|++.|.....|.+|+++|++++||
T Consensus        12 ~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           12 THSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             cCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            345678999999999999999999999999999999999999999999999999999999987

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.80  E-value=2.6e-20  Score=106.80  Aligned_cols=76  Identities=26%  Similarity=0.500  Sum_probs=71.0

Q ss_pred             CCceecc--ccccccCChHHHHHHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccCCCcccCcccee
Q psy691           57 NTRFACH--LCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDGKTNVLTTEYLV  132 (134)
Q Consensus        57 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~~~~~~l~  132 (134)
                      +++|.|.  .|++.|.....|..|++.|.++++|.|..|++.|.....|..|+++|+++++|.|..|+..|.+...|.
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   79 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERK   79 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHH
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHH
Confidence            4689998  599999999999999999999999999999999999999999999999999999999999999887663

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.79  E-value=3e-19  Score=104.25  Aligned_cols=78  Identities=26%  Similarity=0.451  Sum_probs=71.9

Q ss_pred             CCCCceeccc--cccccCChHHHHHHHHHcCCCCceecc--cccccccChhhHHHHHhHhcCCCccccccCCCcccCccc
Q psy691           55 KDNTRFACHL--CSKSFSLQRLLNRHMKCHSDVKRYLCT--FCGKGFNDTFDLKRHTRTHTGKEEEEEEDGKTNVLTTEY  130 (134)
Q Consensus        55 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~k~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~~~~~~  130 (134)
                      ...++|.|.+  |++.|.....|..|++.|.++++|.|.  .|++.|.....|.+|+++|+++++|.|..|++.|.+...
T Consensus        11 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   90 (100)
T 2ebt_A           11 EKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDH   90 (100)
T ss_dssp             CSCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHH
T ss_pred             ccCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHH
Confidence            3456799997  999999999999999999999999996  599999999999999999999999999999999998876


Q ss_pred             ee
Q psy691          131 LV  132 (134)
Q Consensus       131 l~  132 (134)
                      |.
T Consensus        91 l~   92 (100)
T 2ebt_A           91 LA   92 (100)
T ss_dssp             HH
T ss_pred             HH
Confidence            63

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.78  E-value=2.7e-19  Score=110.01  Aligned_cols=75  Identities=20%  Similarity=0.417  Sum_probs=68.3

Q ss_pred             CCCCceeccccccccCChHHHHHHHHHcCCCCceecccccccccChhhHHHHHhHhcCCC------ccccccCCCcccCc
Q psy691           55 KDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKE------EEEEEDGKTNVLTT  128 (134)
Q Consensus        55 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~------~~~c~~~~~~~~~~  128 (134)
                      .++++|.|++|++.|.....|..|+++|++++||.|..|++.|.....|..|+++|++++      +|+|..|+..|++.
T Consensus        46 ~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~~  125 (133)
T 2lt7_A           46 SWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQ  125 (133)
T ss_dssp             HCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHHHHHHHHHTCCCTTSSSCCEEECCCCSSCCCC
T ss_pred             CCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHHHHHHHhHHhcCCCCCCCCCCeecCCCCchhhhc
Confidence            456789999999999999999999999999999999999999999999999999998765      48898888888765


Q ss_pred             c
Q psy691          129 E  129 (134)
Q Consensus       129 ~  129 (134)
                      .
T Consensus       126 ~  126 (133)
T 2lt7_A          126 Y  126 (133)
T ss_dssp             C
T ss_pred             c
Confidence            4

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.78  E-value=2.3e-19  Score=106.18  Aligned_cols=77  Identities=12%  Similarity=0.179  Sum_probs=69.5

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccCCCcccCcccee
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDGKTNVLTTEYLV  132 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~~~~~~l~  132 (134)
                      ...++++|.|.+|++.|.....|..|++.|  .++|.|..|++.|.....|.+|++ |+++++|.|..|++.|.+...|.
T Consensus        10 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H--~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L~   86 (107)
T 1wjp_A           10 PVENKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSIW   86 (107)
T ss_dssp             CCCCCCCCBCTTTCCBCSSHHHHHHHHHHH--HHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHHH
T ss_pred             ccCCCcCeECCCCCCccCCHHHHHHHHHHC--CCCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHHH
Confidence            345567899999999999999999999999  478999999999999999999996 99999999999999999877663

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.77  E-value=2.4e-19  Score=102.57  Aligned_cols=76  Identities=26%  Similarity=0.526  Sum_probs=71.0

Q ss_pred             CCceeccc--cccccCChHHHHHHHHHcCCCCceecc--cccccccChhhHHHHHhHhcCCCccccccCCCcccCcccee
Q psy691           57 NTRFACHL--CSKSFSLQRLLNRHMKCHSDVKRYLCT--FCGKGFNDTFDLKRHTRTHTGKEEEEEEDGKTNVLTTEYLV  132 (134)
Q Consensus        57 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~k~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~~~~~~l~  132 (134)
                      ..+|.|.+  |++.|.....|..|++.|.++++|.|.  .|++.|.....|..|+++|+++++|.|..|+..|.+...|.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLA   82 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHH
Confidence            45799999  999999999999999999999999997  59999999999999999999999999999999998877663

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.76  E-value=1.1e-18  Score=95.72  Aligned_cols=64  Identities=20%  Similarity=0.390  Sum_probs=59.8

Q ss_pred             CCCCCceeccccccccCChHHHHHHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccc
Q psy691           54 RKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEE  117 (134)
Q Consensus        54 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  117 (134)
                      ..++++|.|.+|++.|.....|..|++.|.++++|.|.+|++.|.....|.+|+++|+++++..
T Consensus         4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~p   67 (70)
T 1x5w_A            4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGP   67 (70)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCCS
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCCC
Confidence            3456789999999999999999999999999999999999999999999999999999998753

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.76  E-value=4.6e-19  Score=106.46  Aligned_cols=78  Identities=31%  Similarity=0.564  Sum_probs=68.3

Q ss_pred             CCCCceecc--ccccccCChHHHHHHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCcccc--ccCCCcccCccc
Q psy691           55 KDNTRFACH--LCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEE--EDGKTNVLTTEY  130 (134)
Q Consensus        55 ~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c--~~~~~~~~~~~~  130 (134)
                      .+.++|.|.  .|++.|.....|..|++.|.++++|.|..|++.|.....|..|+++|+++++|.|  +.|+..|.+...
T Consensus        32 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~  111 (119)
T 2jp9_A           32 TGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDE  111 (119)
T ss_dssp             HTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECCSTTCCCEESSHHH
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHHHHHHHHhcCCCCeeCCCCCCccccCCHHH
Confidence            345679998  6999999999999999999999999999999999999999999999999999999  678888888776


Q ss_pred             ee
Q psy691          131 LV  132 (134)
Q Consensus       131 l~  132 (134)
                      |.
T Consensus       112 L~  113 (119)
T 2jp9_A          112 LV  113 (119)
T ss_dssp             HH
T ss_pred             HH
Confidence            53

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.75  E-value=1.5e-18  Score=105.00  Aligned_cols=77  Identities=31%  Similarity=0.544  Sum_probs=71.4

Q ss_pred             CCCceeccccccccCChHHHHHHHHHcCCCCceeccc--ccccccChhhHHHHHhHhcCCCccccc--cCCCcccCccce
Q psy691           56 DNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTF--CGKGFNDTFDLKRHTRTHTGKEEEEEE--DGKTNVLTTEYL  131 (134)
Q Consensus        56 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~c~--~~~~~~~~~~~l  131 (134)
                      +.++|.|.+|++.|.....|..|++.|.++++|.|.+  |++.|.....|..|+++|+++++|.|.  .|+..|.+...|
T Consensus        31 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L  110 (124)
T 1ubd_C           31 GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNL  110 (124)
T ss_dssp             SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHHHHHHHCCCCCCCCSTTCCCCCSSTTTT
T ss_pred             CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCceECCCCCCCCccCCHHHH
Confidence            4568999999999999999999999999999999986  999999999999999999999999995  599999988876


Q ss_pred             e
Q psy691          132 V  132 (134)
Q Consensus       132 ~  132 (134)
                      .
T Consensus       111 ~  111 (124)
T 1ubd_C          111 K  111 (124)
T ss_dssp             H
T ss_pred             H
Confidence            4

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.75  E-value=3.2e-18  Score=97.32  Aligned_cols=60  Identities=22%  Similarity=0.540  Sum_probs=55.2

Q ss_pred             CCCCceeccccccccCChHHHHHHHHHcCCCCceecccccccccChhhHHHHH-hHhcCCC
Q psy691           55 KDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHT-RTHTGKE  114 (134)
Q Consensus        55 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~-~~h~~~~  114 (134)
                      ...++|.|++|++.|.....|..|+++|++++||.|.+|++.|.+...|.+|+ ++|++|+
T Consensus        24 ~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           24 ASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             CCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            34567999999999999999999999999999999999999999999999996 5688875

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.75  E-value=6.6e-19  Score=113.92  Aligned_cols=75  Identities=33%  Similarity=0.567  Sum_probs=50.2

Q ss_pred             CCceeccccccccCChHHHHHHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccCCCcccCccce
Q psy691           57 NTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDGKTNVLTTEYL  131 (134)
Q Consensus        57 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~~~~~~l  131 (134)
                      +++|.|.+|++.|.....|..|++.|.++++|.|..|++.|.....|..|+++|+++++|.|+.|++.|.+...|
T Consensus       103 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L  177 (190)
T 2i13_A          103 EKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDAL  177 (190)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECCCCCCccCCHHHH
Confidence            445666666666666666666666666666667766777777766777776666666677776666666665544

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.75  E-value=7.6e-20  Score=104.72  Aligned_cols=74  Identities=24%  Similarity=0.460  Sum_probs=68.5

Q ss_pred             CCceeccccccccCChHHHHHHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccCCCcccCccce
Q psy691           57 NTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDGKTNVLTTEYL  131 (134)
Q Consensus        57 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~~~~~~l  131 (134)
                      +++|.|.+|++.|.....|..|+++|.++++|.|..|++.|.....|..|+++|++ ++|.|..|+..|.+...|
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L   74 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHL   74 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhh
Confidence            36899999999999999999999999999999999999999999999999999985 899999998888776655

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.75  E-value=7.6e-18  Score=95.63  Aligned_cols=74  Identities=27%  Similarity=0.567  Sum_probs=65.9

Q ss_pred             CCCCCCCceeccccccccCChHHHHHHHHHcCCC----CceecccccccccChhhHHHHHhHhcCCCccccccCCCcc
Q psy691           52 TGRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDV----KRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDGKTNV  125 (134)
Q Consensus        52 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~----k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~  125 (134)
                      ....++++|.|.+|++.|.....|..|++.|...    ++|.|..|++.|.....|..|+++|++++++.|..|+..+
T Consensus         8 ~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~   85 (86)
T 1x6h_A            8 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGPSS   85 (86)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCCCCCC
T ss_pred             ceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCCCCCC
Confidence            3445678999999999999999999999987765    7899999999999999999999999999999998766543

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.75  E-value=2e-18  Score=104.31  Aligned_cols=78  Identities=19%  Similarity=0.396  Sum_probs=69.0

Q ss_pred             CCCCceeccccccccCChHHHHHHHHH---cCCCCceecccccccccChhhHHHHHhHhcCCCccccccCCCcccCccce
Q psy691           55 KDNTRFACHLCSKSFSLQRLLNRHMKC---HSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDGKTNVLTTEYL  131 (134)
Q Consensus        55 ~~~~~~~C~~C~~~f~~~~~l~~H~~~---h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~~~~~~l  131 (134)
                      .++++|.|.+|++.|.....|..|++.   |.++++|.|.+|++.|.....|..|+++|+++++|.|..|+..|.+...|
T Consensus        31 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l  110 (124)
T 2dlq_A           31 TGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDL  110 (124)
T ss_dssp             SSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHSSSCSEECSSSCCEESSHHHH
T ss_pred             CCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCccCCCccchhCCHHHH
Confidence            345789999999999999999999986   56788999999999999999999999999999999999999999887765


Q ss_pred             e
Q psy691          132 V  132 (134)
Q Consensus       132 ~  132 (134)
                      .
T Consensus       111 ~  111 (124)
T 2dlq_A          111 Q  111 (124)
T ss_dssp             H
T ss_pred             H
Confidence            3

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.74  E-value=1.4e-18  Score=104.34  Aligned_cols=77  Identities=27%  Similarity=0.488  Sum_probs=71.9

Q ss_pred             CCCceeccc--cccccCChHHHHHHHHHcCCCCceecc--cccccccChhhHHHHHhHhcCCCccccccCCCcccCccce
Q psy691           56 DNTRFACHL--CSKSFSLQRLLNRHMKCHSDVKRYLCT--FCGKGFNDTFDLKRHTRTHTGKEEEEEEDGKTNVLTTEYL  131 (134)
Q Consensus        56 ~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~k~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~~~~~~l  131 (134)
                      ++++|.|.+  |++.|.....|..|++.|.++++|.|.  .|++.|.....|..|+++|+++++|.|..|+..|.+...|
T Consensus         3 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   82 (119)
T 2jp9_A            3 EKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHL   82 (119)
T ss_dssp             SSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHH
T ss_pred             CCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHH
Confidence            467899997  999999999999999999999999999  6999999999999999999999999999999999887765


Q ss_pred             e
Q psy691          132 V  132 (134)
Q Consensus       132 ~  132 (134)
                      .
T Consensus        83 ~   83 (119)
T 2jp9_A           83 K   83 (119)
T ss_dssp             H
T ss_pred             H
Confidence            3

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.74  E-value=6.3e-19  Score=105.46  Aligned_cols=80  Identities=14%  Similarity=0.054  Sum_probs=72.0

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHH--cCCCCcee-cccccccc--cChhhHHHHHhHhcCCCccccccCCCcccC
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKC--HSDVKRYL-CTFCGKGF--NDTFDLKRHTRTHTGKEEEEEEDGKTNVLT  127 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~--h~~~k~~~-C~~C~~~f--~~~~~l~~H~~~h~~~~~~~c~~~~~~~~~  127 (134)
                      ...++++|.|.+|++.|.....|..|++.  |.+.+++. |..|++.|  .....|..|+++|+++++|.|..|++.|.+
T Consensus        13 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~   92 (115)
T 2dmi_A           13 IFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFES   92 (115)
T ss_dssp             CCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCSSSCCBCSS
T ss_pred             eeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceECCCCCCccCC
Confidence            44567889999999999999999999999  87777665 99999999  899999999999999999999999999998


Q ss_pred             cccee
Q psy691          128 TEYLV  132 (134)
Q Consensus       128 ~~~l~  132 (134)
                      ...|.
T Consensus        93 ~~~L~   97 (115)
T 2dmi_A           93 LQDLS   97 (115)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            87663

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.73  E-value=7.5e-18  Score=92.88  Aligned_cols=62  Identities=32%  Similarity=0.612  Sum_probs=58.1

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceecccccccccChhhHHHHHhHhcCCC
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKE  114 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~  114 (134)
                      ...++++|.|.+|++.|.....|..|++.|.++++|.|.+|++.|.....|.+|+++|+++.
T Consensus         8 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            8 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             ccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            34567899999999999999999999999999999999999999999999999999999864

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.72  E-value=5.5e-18  Score=102.32  Aligned_cols=78  Identities=19%  Similarity=0.289  Sum_probs=71.5

Q ss_pred             CCCCceeccccccccCChHHHHHHHHHcCCCCceecccccccccChhhHHHHHhH---hcCCCccccccCCCcccCccce
Q psy691           55 KDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRT---HTGKEEEEEEDGKTNVLTTEYL  131 (134)
Q Consensus        55 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~---h~~~~~~~c~~~~~~~~~~~~l  131 (134)
                      .+.++|.|.+|++.|.....|..|++.|.++++|.|..|++.|.....|..|++.   |.++++|.|..|+..|.+...|
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l   82 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMEL   82 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHH
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHH
Confidence            3467899999999999999999999999999999999999999999999999996   5788999999999999887765


Q ss_pred             e
Q psy691          132 V  132 (134)
Q Consensus       132 ~  132 (134)
                      .
T Consensus        83 ~   83 (124)
T 2dlq_A           83 R   83 (124)
T ss_dssp             H
T ss_pred             H
Confidence            3

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.72  E-value=3.2e-18  Score=99.89  Aligned_cols=67  Identities=18%  Similarity=0.324  Sum_probs=61.9

Q ss_pred             CCCCCCCceeccccccccC-ChHHHHHHHHHcCC-CCceecccccccccChhhHHHHHhHhcCCCcccc
Q psy691           52 TGRKDNTRFACHLCSKSFS-LQRLLNRHMKCHSD-VKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEE  118 (134)
Q Consensus        52 ~~~~~~~~~~C~~C~~~f~-~~~~l~~H~~~h~~-~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c  118 (134)
                      ....++++|.|.+|++.|. ....|..|+++|.+ +++|.|.+|++.|.....|.+|+++|+++++...
T Consensus        17 ~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~~~   85 (98)
T 2gqj_A           17 RAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSDA   85 (98)
T ss_dssp             HTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSSCC
T ss_pred             HHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCCCC
Confidence            3456678999999999999 99999999999998 9999999999999999999999999999998654

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.71  E-value=1.1e-17  Score=88.00  Aligned_cols=56  Identities=25%  Similarity=0.705  Sum_probs=54.0

Q ss_pred             ceeccccccccCChHHHHHHHHHcCCCCceecccccccccChhhHHHHHhHhcCCC
Q psy691           59 RFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKE  114 (134)
Q Consensus        59 ~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~  114 (134)
                      +|.|.+|++.|.....|..|+++|.++++|.|..|++.|.....|.+|+++|++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            58999999999999999999999999999999999999999999999999999876

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.71  E-value=8.1e-18  Score=88.52  Aligned_cols=56  Identities=29%  Similarity=0.565  Sum_probs=51.1

Q ss_pred             CCceeccccccccCChHHHHHHHHHcCCCCceecccccccccChhhHHHHHhHhcC
Q psy691           57 NTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG  112 (134)
Q Consensus        57 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~  112 (134)
                      +++|.|.+|++.|.....|..|+++|.++++|.|..|++.|.....|..|+++|++
T Consensus         2 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            2 SSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ---CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            56899999999999999999999999999999999999999999999999999874

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.71  E-value=6.1e-18  Score=109.36  Aligned_cols=76  Identities=32%  Similarity=0.564  Sum_probs=44.4

Q ss_pred             CCCCceeccccccccCChHHHHHHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccCCCcccCccc
Q psy691           55 KDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDGKTNVLTTEY  130 (134)
Q Consensus        55 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~~~~~~  130 (134)
                      .+.++|.|.+|++.|.....|..|++.|.++++|.|..|++.|.....|..|+++|+++++|.|..|+..|.+...
T Consensus        45 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~  120 (190)
T 2i13_A           45 TGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAH  120 (190)
T ss_dssp             ---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHH
T ss_pred             CCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHH
Confidence            3445566666666666666666666666666666666666666666666666666666666666555555555443

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.70  E-value=8.2e-18  Score=97.86  Aligned_cols=63  Identities=21%  Similarity=0.385  Sum_probs=56.9

Q ss_pred             CCCCceecccccccc-CChHHHHHHHHHcCCCCceecccccccccChhhHHHH-HhHhcCCCcccc
Q psy691           55 KDNTRFACHLCSKSF-SLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRH-TRTHTGKEEEEE  118 (134)
Q Consensus        55 ~~~~~~~C~~C~~~f-~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H-~~~h~~~~~~~c  118 (134)
                      .++++|.|++|++.| .....|..|+++| ++++|.|..|++.|.....|..| +++|+++..|.+
T Consensus        30 ~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p~~~~   94 (96)
T 2ctd_A           30 VDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLPSGPS   94 (96)
T ss_dssp             HHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCSSCSC
T ss_pred             cCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCCCCCCC
Confidence            356789999999999 9999999999999 99999999999999999999999 889987655543

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.70  E-value=1.2e-17  Score=101.02  Aligned_cols=75  Identities=27%  Similarity=0.422  Sum_probs=68.1

Q ss_pred             CCceecc--ccccccCChHHHHHHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCcccccc--CCCcccCcccee
Q psy691           57 NTRFACH--LCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEED--GKTNVLTTEYLV  132 (134)
Q Consensus        57 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~--~~~~~~~~~~l~  132 (134)
                      .++|.|+  .|++.|.....|..|++.| +.++|.|..|++.|.....|..|+++|+++++|.|..  |+..|.+...|.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~   81 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLR   81 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHH
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHH
Confidence            4579999  8999999999999999999 8899999999999999999999999999999999975  999998876653

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.69  E-value=1.1e-17  Score=104.90  Aligned_cols=73  Identities=32%  Similarity=0.448  Sum_probs=67.5

Q ss_pred             eeccccccccCChHHHHHHHHHcCCCCceeccc--ccccccChhhHHHHHhHhcCCCcccccc--CCCcccCcccee
Q psy691           60 FACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTF--CGKGFNDTFDLKRHTRTHTGKEEEEEED--GKTNVLTTEYLV  132 (134)
Q Consensus        60 ~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~c~~--~~~~~~~~~~l~  132 (134)
                      |.|.+|++.|.....|..|++.|.++++|.|.+  |++.|.....|.+|+++|+++++|.|..  |++.|.+...|.
T Consensus        63 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~  139 (155)
T 2rpc_A           63 EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRK  139 (155)
T ss_dssp             TTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHH
T ss_pred             cCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHH
Confidence            789999999999999999999999999999998  9999999999999999999999999985  889998876653

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.69  E-value=1.7e-17  Score=103.92  Aligned_cols=78  Identities=26%  Similarity=0.488  Sum_probs=70.0

Q ss_pred             CCCCceeccc--cccccCChHHHHHHHHHcCCCCceeccc--ccccccChhhHHHHH-hHhcCCCcccccc--CCCcccC
Q psy691           55 KDNTRFACHL--CSKSFSLQRLLNRHMKCHSDVKRYLCTF--CGKGFNDTFDLKRHT-RTHTGKEEEEEED--GKTNVLT  127 (134)
Q Consensus        55 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~k~~~C~~--C~~~f~~~~~l~~H~-~~h~~~~~~~c~~--~~~~~~~  127 (134)
                      .+.++|.|.+  |++.|.....|..|++.|.++++|.|.+  |++.|.....|..|+ ++|+++++|.|..  |++.|.+
T Consensus        63 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~  142 (155)
T 2gli_A           63 TGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTD  142 (155)
T ss_dssp             HCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESS
T ss_pred             CCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCC
Confidence            4567899985  9999999999999999999999999998  999999999999998 7899999999987  9999988


Q ss_pred             cccee
Q psy691          128 TEYLV  132 (134)
Q Consensus       128 ~~~l~  132 (134)
                      ...|.
T Consensus       143 ~~~L~  147 (155)
T 2gli_A          143 PSSLR  147 (155)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            77663

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.69  E-value=1.4e-17  Score=94.15  Aligned_cols=71  Identities=27%  Similarity=0.430  Sum_probs=66.1

Q ss_pred             ceec--cccccccCChHHHHHHHHHcCCCCceeccc--ccccccChhhHHHHHhHhcCCCcccccc---CCCcccCccce
Q psy691           59 RFAC--HLCSKSFSLQRLLNRHMKCHSDVKRYLCTF--CGKGFNDTFDLKRHTRTHTGKEEEEEED---GKTNVLTTEYL  131 (134)
Q Consensus        59 ~~~C--~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~c~~---~~~~~~~~~~l  131 (134)
                      +|.|  +.|++.|.....|..|++.|.++++|.|..  |++.|.....|.+|+++|++   |.|..   |+..|.+...|
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l   77 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLY   77 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHH
Confidence            5899  889999999999999999999999999988  99999999999999999999   99988   99999887665


Q ss_pred             e
Q psy691          132 V  132 (134)
Q Consensus       132 ~  132 (134)
                      .
T Consensus        78 ~   78 (85)
T 2j7j_A           78 L   78 (85)
T ss_dssp             H
T ss_pred             H
Confidence            3

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.68  E-value=1.7e-16  Score=91.64  Aligned_cols=61  Identities=26%  Similarity=0.418  Sum_probs=58.1

Q ss_pred             ceeccccccccCChHHHHHHHHH-cCCCCc--------eecccccccccChhhHHHHHhHhcCCCccccc
Q psy691           59 RFACHLCSKSFSLQRLLNRHMKC-HSDVKR--------YLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEE  119 (134)
Q Consensus        59 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~k~--------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~  119 (134)
                      .+.|..|++.|.....|..|++. |.++++        |.|..|++.|.....|.+|+++|+++++|.|+
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            47899999999999999999998 998887        99999999999999999999999999999996

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.66  E-value=1.9e-17  Score=88.10  Aligned_cols=49  Identities=24%  Similarity=0.502  Sum_probs=46.0

Q ss_pred             CCCceecccccccccChhhHHHHHhHhcCCCccccccCCCcccCcccee
Q psy691           84 DVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDGKTNVLTTEYLV  132 (134)
Q Consensus        84 ~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~~~~~~l~  132 (134)
                      .+|||.|..|++.|.....|..|+++|+|++||.|..|++.|.+...|.
T Consensus         1 SEKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~   49 (60)
T 4gzn_C            1 SERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVN   49 (60)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHH
T ss_pred             CCCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHH
Confidence            4799999999999999999999999999999999999999999887764

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.66  E-value=9.5e-17  Score=85.24  Aligned_cols=57  Identities=33%  Similarity=0.768  Sum_probs=53.1

Q ss_pred             CceeccccccccCChHHHHHHHHHcCCCCceecccccccccChhhHHHHH-hHhcCCC
Q psy691           58 TRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHT-RTHTGKE  114 (134)
Q Consensus        58 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~-~~h~~~~  114 (134)
                      ++|.|.+|++.|.....|..|++.|.++++|.|..|++.|.....|.+|+ ++|+++.
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~   58 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL   58 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCSS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCcC
Confidence            47999999999999999999999999999999999999999999999996 6788753

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.66  E-value=9.1e-17  Score=94.62  Aligned_cols=65  Identities=31%  Similarity=0.585  Sum_probs=61.2

Q ss_pred             CCCCCceeccccccccCChHHHHHHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCcccc
Q psy691           54 RKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEE  118 (134)
Q Consensus        54 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c  118 (134)
                      ..+.++|.|.+|++.|.....|..|++.|.++++|.|..|++.|.....|..|+++|+++++|.+
T Consensus        40 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~~  104 (106)
T 2ee8_A           40 HTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA  104 (106)
T ss_dssp             HCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHHHHTTSCCCCCC
T ss_pred             cCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHHHHhCCCCCCcC
Confidence            34567899999999999999999999999999999999999999999999999999999999875

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.65  E-value=1.4e-16  Score=88.99  Aligned_cols=64  Identities=23%  Similarity=0.532  Sum_probs=57.7

Q ss_pred             CCCCceeccccccccCChHHHHHHHHHcCC---CCceecccccccccChhhHHHHHh-HhcCCCcccc
Q psy691           55 KDNTRFACHLCSKSFSLQRLLNRHMKCHSD---VKRYLCTFCGKGFNDTFDLKRHTR-THTGKEEEEE  118 (134)
Q Consensus        55 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~---~k~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~c  118 (134)
                      .++++|.|.+|++.|.....|..|++.|.+   +++|.|.+|++.|.....|.+|++ .|.++++...
T Consensus         3 ~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~   70 (78)
T 2d9h_A            3 SGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQ   70 (78)
T ss_dssp             CSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSCCS
T ss_pred             CCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCCcc
Confidence            457899999999999999999999999986   899999999999999999999995 5777777654

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.65  E-value=2e-16  Score=85.56  Aligned_cols=58  Identities=26%  Similarity=0.580  Sum_probs=54.1

Q ss_pred             CCCCceeccccccccCChHHHHHHHHH-c-CCCCceecccccccccChhhHHHHHhHhcC
Q psy691           55 KDNTRFACHLCSKSFSLQRLLNRHMKC-H-SDVKRYLCTFCGKGFNDTFDLKRHTRTHTG  112 (134)
Q Consensus        55 ~~~~~~~C~~C~~~f~~~~~l~~H~~~-h-~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~  112 (134)
                      .++++|.|++|++.|.....|..|++. | .++++|.|..|++.|.....|..|+++|++
T Consensus         6 ~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            6 EGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             EETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             CCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            356789999999999999999999998 7 589999999999999999999999999876

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.64  E-value=3.5e-16  Score=97.96  Aligned_cols=76  Identities=24%  Similarity=0.281  Sum_probs=68.9

Q ss_pred             CCCceeccccccccCChHHHHHHHHH-cCCCCc--------eecccccccccChhhHHHHHhHhcCCCcccccc--CCCc
Q psy691           56 DNTRFACHLCSKSFSLQRLLNRHMKC-HSDVKR--------YLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEED--GKTN  124 (134)
Q Consensus        56 ~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~k~--------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~--~~~~  124 (134)
                      ....|.|.+|++.|.....|..|++. |.+.++        |.|..|++.|.....|..|+++|+++++|.|..  |+..
T Consensus        22 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~  101 (155)
T 2rpc_A           22 AQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKI  101 (155)
T ss_dssp             TCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCE
T ss_pred             hhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCc
Confidence            45679999999999999999999998 777655        899999999999999999999999999999987  9999


Q ss_pred             ccCccce
Q psy691          125 VLTTEYL  131 (134)
Q Consensus       125 ~~~~~~l  131 (134)
                      |.+...|
T Consensus       102 f~~~~~L  108 (155)
T 2rpc_A          102 FARSENL  108 (155)
T ss_dssp             ESCHHHH
T ss_pred             cCCHHHH
Confidence            9887665

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.64  E-value=2.4e-16  Score=90.10  Aligned_cols=60  Identities=30%  Similarity=0.728  Sum_probs=55.0

Q ss_pred             CCCceeccccccccCChHHHHHHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCc
Q psy691           56 DNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEE  115 (134)
Q Consensus        56 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  115 (134)
                      +.++|.|.+|++.|.....|..|++.|.++++|.|..|++.|.....|..|+++|+++++
T Consensus        31 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~k~   90 (90)
T 1a1h_A           31 GQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQKD   90 (90)
T ss_dssp             CCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHGGGGC---
T ss_pred             CCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHHHHHhcccCC
Confidence            457899999999999999999999999999999999999999999999999999999863

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.64  E-value=2.3e-16  Score=98.64  Aligned_cols=78  Identities=29%  Similarity=0.469  Sum_probs=69.2

Q ss_pred             CCCCceeccc-----cccccCChHHHHHHHHHcCCCCceeccc--ccccccChhhHHHHHhHhcCCCcccccc--CCCcc
Q psy691           55 KDNTRFACHL-----CSKSFSLQRLLNRHMKCHSDVKRYLCTF--CGKGFNDTFDLKRHTRTHTGKEEEEEED--GKTNV  125 (134)
Q Consensus        55 ~~~~~~~C~~-----C~~~f~~~~~l~~H~~~h~~~k~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~c~~--~~~~~  125 (134)
                      .+.++|.|.+     |++.|.....|..|++.|.++++|.|.+  |++.|.....|..|+++|+++++|.|+.  |+..|
T Consensus        30 ~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f  109 (155)
T 2gli_A           30 GERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAF  109 (155)
T ss_dssp             SCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEE
T ss_pred             CCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCcc
Confidence            4456787765     3599999999999999999999999986  9999999999999999999999999987  99999


Q ss_pred             cCcccee
Q psy691          126 LTTEYLV  132 (134)
Q Consensus       126 ~~~~~l~  132 (134)
                      .+...|.
T Consensus       110 ~~~~~L~  116 (155)
T 2gli_A          110 SNASDRA  116 (155)
T ss_dssp             SSSSTTH
T ss_pred             CCHHHHH
Confidence            8887764

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.63  E-value=1.4e-16  Score=102.97  Aligned_cols=75  Identities=27%  Similarity=0.493  Sum_probs=45.1

Q ss_pred             CCceec--cccccccCChHHHHHHHHHcCCCCceec--ccccccccChhhHHHHHhHhcCCCccccc--cCCCcccCccc
Q psy691           57 NTRFAC--HLCSKSFSLQRLLNRHMKCHSDVKRYLC--TFCGKGFNDTFDLKRHTRTHTGKEEEEEE--DGKTNVLTTEY  130 (134)
Q Consensus        57 ~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~k~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~c~--~~~~~~~~~~~  130 (134)
                      .++|.|  ..|++.|.....|..|++.|.++++|.|  ..|++.|.....|..|+++|+++++|.|.  .|+..|.+...
T Consensus        10 ~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~   89 (190)
T 1tf6_A           10 YKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKAN   89 (190)
T ss_dssp             CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHH
T ss_pred             CcceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHH
Confidence            345666  4566666666666666666666666666  55666666666666666666666666665  45555555443


Q ss_pred             e
Q psy691          131 L  131 (134)
Q Consensus       131 l  131 (134)
                      |
T Consensus        90 l   90 (190)
T 1tf6_A           90 M   90 (190)
T ss_dssp             H
T ss_pred             H
Confidence            3

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.63  E-value=4.1e-16  Score=100.73  Aligned_cols=79  Identities=24%  Similarity=0.450  Sum_probs=62.0

Q ss_pred             CCCCCCceecc--ccccccCChHHHHHHH-HHc-CCCCceec--ccccccccChhhHHHHHhHhcCCCcccccc--CCCc
Q psy691           53 GRKDNTRFACH--LCSKSFSLQRLLNRHM-KCH-SDVKRYLC--TFCGKGFNDTFDLKRHTRTHTGKEEEEEED--GKTN  124 (134)
Q Consensus        53 ~~~~~~~~~C~--~C~~~f~~~~~l~~H~-~~h-~~~k~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~--~~~~  124 (134)
                      ...++++|.|.  .|++.|.....|..|+ +.| .+.++|.|  ..|++.|.....|..|+++|+++++|.|..  |+..
T Consensus        66 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~  145 (190)
T 1tf6_A           66 THTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKR  145 (190)
T ss_dssp             TTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCB
T ss_pred             HccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCch
Confidence            34456678888  7888888888888888 456 46778888  778888888888888888888888888876  8888


Q ss_pred             ccCccce
Q psy691          125 VLTTEYL  131 (134)
Q Consensus       125 ~~~~~~l  131 (134)
                      |.+...|
T Consensus       146 F~~~~~L  152 (190)
T 1tf6_A          146 FSLPSRL  152 (190)
T ss_dssp             CSSHHHH
T ss_pred             hcCHHHH
Confidence            8776655

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.62  E-value=2.2e-15  Score=83.85  Aligned_cols=64  Identities=17%  Similarity=0.439  Sum_probs=56.0

Q ss_pred             CCCCCCCceeccccccccCChHHHHHHHH-HcCCC-CceecccccccccChhhHHHHHhHhcC-CCc
Q psy691           52 TGRKDNTRFACHLCSKSFSLQRLLNRHMK-CHSDV-KRYLCTFCGKGFNDTFDLKRHTRTHTG-KEE  115 (134)
Q Consensus        52 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~-k~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~  115 (134)
                      ....++++|.|.+|++.|.....|..|++ .|.++ ++|.|..|++.|.....|.+|++.|++ +.|
T Consensus         8 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~p   74 (77)
T 2ct1_A            8 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGP   74 (77)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCSCC
T ss_pred             cccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCCCC
Confidence            44566789999999999999999999997 68764 899999999999999999999998655 444

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.61  E-value=1.1e-15  Score=88.27  Aligned_cols=64  Identities=25%  Similarity=0.518  Sum_probs=59.2

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCcc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEE  116 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  116 (134)
                      .....++|.|.+|++.|.....|..|++.|.++++|.|..|++.|.....|..|+++|+++++.
T Consensus        30 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~p   93 (96)
T 2dmd_A           30 CHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHTGDSGP   93 (96)
T ss_dssp             GCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHHHTTCCSCCCC
T ss_pred             hcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHhcCCCCC
Confidence            3455678999999999999999999999999999999999999999999999999999998754

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.61  E-value=9.8e-16  Score=84.38  Aligned_cols=58  Identities=33%  Similarity=0.653  Sum_probs=53.8

Q ss_pred             CCCCCceecc--ccccccCChHHHHHHHHHcCCCCceecccccccccChhhHHHHHhHhc
Q psy691           54 RKDNTRFACH--LCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHT  111 (134)
Q Consensus        54 ~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~  111 (134)
                      ..+.++|.|+  .|++.|.....|..|++.|.++++|.|..|++.|.....|.+|+++|+
T Consensus        14 ~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           14 VPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             CCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            4456789997  599999999999999999999999999999999999999999999885

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.60  E-value=9e-16  Score=83.09  Aligned_cols=59  Identities=20%  Similarity=0.331  Sum_probs=55.0

Q ss_pred             CCCCceeccccccccCChHHHHHHHHHcCCCCceecc-cccccccChhhHHHHHhHhcCCCc
Q psy691           55 KDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCT-FCGKGFNDTFDLKRHTRTHTGKEE  115 (134)
Q Consensus        55 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~-~C~~~f~~~~~l~~H~~~h~~~~~  115 (134)
                      -+.++|.|.+|++.|. ...|..|+++ .+++||.|. .|++.|.....|..|+++|..+++
T Consensus         6 C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            6 SGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             CCCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            4567899999999999 9999999999 999999999 999999999999999999988765

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.60  E-value=1.2e-15  Score=85.63  Aligned_cols=57  Identities=33%  Similarity=0.718  Sum_probs=53.8

Q ss_pred             CCCceeccccccccCChHHHHHHHHHcCCCCceecccccccccChhhHHHHHhHhcC
Q psy691           56 DNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG  112 (134)
Q Consensus        56 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~  112 (134)
                      +.++|.|.+|++.|.....|..|++.|.++++|.|..|++.|.....|.+|+++|+|
T Consensus        26 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~g   82 (82)
T 2kmk_A           26 DTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG   82 (82)
T ss_dssp             TCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhhCC
Confidence            456899999999999999999999999999999999999999999999999999976

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.60  E-value=1.1e-15  Score=90.24  Aligned_cols=61  Identities=23%  Similarity=0.448  Sum_probs=58.1

Q ss_pred             CceeccccccccCChHHHHHHHHHcCCCCceecccccccccChhhHHHHHh-HhcCCCccccc
Q psy691           58 TRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTR-THTGKEEEEEE  119 (134)
Q Consensus        58 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~c~  119 (134)
                      ++|.|.+|++.|.....|..|++ |.++++|.|.+|++.|.....|.+|++ +|+++++|.|.
T Consensus        41 ~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           41 NAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSIWRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             HSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHHHHHHHHTSCCCCCCCCC
T ss_pred             CCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHHHHHHHHHcCCCCCCCCC
Confidence            57999999999999999999996 999999999999999999999999997 89999999885

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.58  E-value=4.3e-15  Score=81.57  Aligned_cols=57  Identities=28%  Similarity=0.617  Sum_probs=52.4

Q ss_pred             CCCCCceeccc--cccccCChHHHHHHHHHcCCCCceeccc--ccccccChhhHHHHHhHh
Q psy691           54 RKDNTRFACHL--CSKSFSLQRLLNRHMKCHSDVKRYLCTF--CGKGFNDTFDLKRHTRTH  110 (134)
Q Consensus        54 ~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~k~~~C~~--C~~~f~~~~~l~~H~~~h  110 (134)
                      ....++|.|.+  |++.|.....|..|++.|.++++|.|.+  |++.|.....|.+|+++|
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            34457899998  9999999999999999999999999975  999999999999999876

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.57  E-value=3.7e-16  Score=78.65  Aligned_cols=45  Identities=33%  Similarity=0.580  Sum_probs=40.4

Q ss_pred             HHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccC
Q psy691           77 RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDG  121 (134)
Q Consensus        77 ~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~  121 (134)
                      +|+++|.++++|.|..|++.|.....|.+|+++|+++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            467789999999999999999999999999999999999999765

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.56  E-value=6.4e-16  Score=77.77  Aligned_cols=44  Identities=30%  Similarity=0.528  Sum_probs=40.2

Q ss_pred             HHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccC
Q psy691           78 HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDG  121 (134)
Q Consensus        78 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~  121 (134)
                      |+++|.++++|.|..|++.|.....|.+|+++|+++++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            67789999999999999999999999999999999999999765

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.56  E-value=7.4e-16  Score=76.79  Aligned_cols=44  Identities=25%  Similarity=0.394  Sum_probs=38.8

Q ss_pred             HHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccC
Q psy691           78 HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDG  121 (134)
Q Consensus        78 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~  121 (134)
                      |+++|.++++|.|..|++.|.....|.+|+++|+++++|.|..|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            46678889999999999999999999999999999999999765

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.56  E-value=7.4e-16  Score=77.49  Aligned_cols=45  Identities=31%  Similarity=0.527  Sum_probs=40.4

Q ss_pred             HHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccC
Q psy691           77 RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDG  121 (134)
Q Consensus        77 ~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~  121 (134)
                      +|+++|.++++|.|..|++.|.....|.+|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            367789999999999999999999999999999999999999765

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.56  E-value=7.8e-16  Score=77.45  Aligned_cols=44  Identities=30%  Similarity=0.554  Sum_probs=39.7

Q ss_pred             HHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccC
Q psy691           78 HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDG  121 (134)
Q Consensus        78 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~  121 (134)
                      |+++|.++++|.|..|++.|.....|.+|+++|+++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            67788999999999999999999999999999999999999765

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.56  E-value=5.7e-16  Score=77.96  Aligned_cols=45  Identities=29%  Similarity=0.534  Sum_probs=41.5

Q ss_pred             HHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccC
Q psy691           77 RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDG  121 (134)
Q Consensus        77 ~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~  121 (134)
                      +|+++|.++++|.|..|++.|.....|.+|+++|+++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~g   46 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTBCC
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCCCC
Confidence            467889999999999999999999999999999999999999864

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.56  E-value=8.2e-16  Score=77.33  Aligned_cols=45  Identities=31%  Similarity=0.574  Sum_probs=40.8

Q ss_pred             HHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccC
Q psy691           77 RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDG  121 (134)
Q Consensus        77 ~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~  121 (134)
                      +|+++|.++++|.|..|++.|.....|.+|+++|+++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            367789999999999999999999999999999999999999765

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.56  E-value=7.2e-16  Score=77.54  Aligned_cols=45  Identities=31%  Similarity=0.668  Sum_probs=40.9

Q ss_pred             HHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccC
Q psy691           77 RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDG  121 (134)
Q Consensus        77 ~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~  121 (134)
                      +|+++|.++++|.|..|++.|.....|.+|+++|+++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            367789999999999999999999999999999999999999765

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.55  E-value=5.3e-16  Score=78.05  Aligned_cols=45  Identities=31%  Similarity=0.561  Sum_probs=40.9

Q ss_pred             HHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccC
Q psy691           77 RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDG  121 (134)
Q Consensus        77 ~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~  121 (134)
                      +|+++|+++++|.|..|++.|.....|.+|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            467889999999999999999999999999999999999999764

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.55  E-value=9.7e-16  Score=77.05  Aligned_cols=45  Identities=27%  Similarity=0.511  Sum_probs=40.7

Q ss_pred             HHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccC
Q psy691           77 RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDG  121 (134)
Q Consensus        77 ~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~  121 (134)
                      +|+++|.++++|.|..|++.|.....|.+|+++|+++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999999765

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.55  E-value=8.7e-16  Score=77.23  Aligned_cols=45  Identities=31%  Similarity=0.587  Sum_probs=40.4

Q ss_pred             HHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccC
Q psy691           77 RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDG  121 (134)
Q Consensus        77 ~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~  121 (134)
                      +|+++|.++++|.|..|++.|.....|.+|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            367789999999999999999999999999999999999999765

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.55  E-value=9.1e-16  Score=77.13  Aligned_cols=45  Identities=27%  Similarity=0.470  Sum_probs=40.1

Q ss_pred             HHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccC
Q psy691           77 RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDG  121 (134)
Q Consensus        77 ~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~  121 (134)
                      +|+++|+++++|.|..|++.|.....|.+|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            367788999999999999999999999999999999999999765

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.55  E-value=9.5e-16  Score=77.09  Aligned_cols=44  Identities=34%  Similarity=0.526  Sum_probs=39.7

Q ss_pred             HHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccC
Q psy691           78 HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDG  121 (134)
Q Consensus        78 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~  121 (134)
                      |+++|.++++|.|..|++.|.....|.+|+++|+++++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            67788999999999999999999999999999999999999765

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.55  E-value=9.2e-16  Score=77.15  Aligned_cols=45  Identities=29%  Similarity=0.567  Sum_probs=40.4

Q ss_pred             HHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccC
Q psy691           77 RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDG  121 (134)
Q Consensus        77 ~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~  121 (134)
                      .|+++|.++++|.|..|++.|.....|.+|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            367789999999999999999999999999999999999999765

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.55  E-value=7.8e-16  Score=77.41  Aligned_cols=44  Identities=32%  Similarity=0.600  Sum_probs=39.7

Q ss_pred             HHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccC
Q psy691           78 HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDG  121 (134)
Q Consensus        78 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~  121 (134)
                      |+++|.++++|.|..|++.|.....|.+|+++|+++++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            67788999999999999999999999999999999999999765

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.55  E-value=8.7e-16  Score=77.24  Aligned_cols=45  Identities=20%  Similarity=0.378  Sum_probs=40.8

Q ss_pred             HHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccC
Q psy691           77 RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDG  121 (134)
Q Consensus        77 ~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~  121 (134)
                      +|+++|.++++|.|..|++.|.....|.+|+++|+++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            367789999999999999999999999999999999999999765

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.55  E-value=9.1e-16  Score=77.12  Aligned_cols=45  Identities=31%  Similarity=0.516  Sum_probs=40.1

Q ss_pred             HHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccC
Q psy691           77 RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDG  121 (134)
Q Consensus        77 ~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~  121 (134)
                      +|+++|.++++|.|..|++.|.....|.+|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367788999999999999999999999999999999999999765

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.55  E-value=9.9e-16  Score=77.05  Aligned_cols=44  Identities=34%  Similarity=0.621  Sum_probs=39.8

Q ss_pred             HHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccC
Q psy691           78 HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDG  121 (134)
Q Consensus        78 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~  121 (134)
                      |+++|.++++|.|..|++.|.....|.+|+++|+++++|.|..|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            66788999999999999999999999999999999999999765

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.55  E-value=8.6e-16  Score=77.21  Aligned_cols=45  Identities=29%  Similarity=0.498  Sum_probs=39.5

Q ss_pred             HHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccC
Q psy691           77 RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDG  121 (134)
Q Consensus        77 ~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~  121 (134)
                      +|+++|+++++|.|..|++.|.....|.+|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            367788899999999999999999999999999999999999765

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.55  E-value=9.5e-16  Score=77.10  Aligned_cols=45  Identities=33%  Similarity=0.520  Sum_probs=40.2

Q ss_pred             HHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccC
Q psy691           77 RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDG  121 (134)
Q Consensus        77 ~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~  121 (134)
                      +|+++|.++++|.|..|++.|.....|.+|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            367788999999999999999999999999999999999999765

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.55  E-value=8.6e-16  Score=77.22  Aligned_cols=45  Identities=31%  Similarity=0.479  Sum_probs=40.6

Q ss_pred             HHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccC
Q psy691           77 RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDG  121 (134)
Q Consensus        77 ~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~  121 (134)
                      +|+++|.++++|.|..|++.|.....|.+|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            367789999999999999999999999999999999999999765

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.55  E-value=8.6e-16  Score=77.26  Aligned_cols=45  Identities=33%  Similarity=0.544  Sum_probs=40.2

Q ss_pred             HHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccC
Q psy691           77 RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDG  121 (134)
Q Consensus        77 ~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~  121 (134)
                      .|+++|.++++|.|..|++.|.....|.+|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            367789999999999999999999999999999999999999765

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.55  E-value=9.9e-16  Score=77.02  Aligned_cols=45  Identities=29%  Similarity=0.582  Sum_probs=39.8

Q ss_pred             HHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccC
Q psy691           77 RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDG  121 (134)
Q Consensus        77 ~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~  121 (134)
                      +|+++|.++++|.|..|++.|.....|..|+++|+++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            367788899999999999999999999999999999999999765

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.55  E-value=7.2e-16  Score=77.50  Aligned_cols=45  Identities=29%  Similarity=0.504  Sum_probs=39.8

Q ss_pred             HHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccC
Q psy691           77 RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDG  121 (134)
Q Consensus        77 ~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~  121 (134)
                      +|+++|.++++|.|..|++.|.....|.+|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            367788899999999999999999999999999999999999765

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.55  E-value=9.4e-16  Score=77.12  Aligned_cols=45  Identities=31%  Similarity=0.549  Sum_probs=40.3

Q ss_pred             HHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccC
Q psy691           77 RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDG  121 (134)
Q Consensus        77 ~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~  121 (134)
                      +|+++|.++++|.|..|++.|.....|.+|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367789999999999999999999999999999999999999765

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.55  E-value=8.8e-16  Score=77.22  Aligned_cols=44  Identities=32%  Similarity=0.515  Sum_probs=39.6

Q ss_pred             HHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccC
Q psy691           78 HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDG  121 (134)
Q Consensus        78 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~  121 (134)
                      |+++|.++++|.|..|++.|.....|.+|+++|++++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            66788899999999999999999999999999999999999765

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.55  E-value=9.4e-16  Score=77.14  Aligned_cols=45  Identities=24%  Similarity=0.414  Sum_probs=40.9

Q ss_pred             HHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccC
Q psy691           77 RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDG  121 (134)
Q Consensus        77 ~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~  121 (134)
                      +|+++|.++++|.|..|++.|.....|..|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            477889999999999999999999999999999999999999765

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.55  E-value=6.4e-16  Score=77.71  Aligned_cols=45  Identities=29%  Similarity=0.411  Sum_probs=40.4

Q ss_pred             HHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccC
Q psy691           77 RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDG  121 (134)
Q Consensus        77 ~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~  121 (134)
                      +|+++|.++++|.|..|++.|.....|.+|+++|+++++|.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            367789999999999999999999999999999999999999765

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.55  E-value=1.2e-15  Score=76.64  Aligned_cols=45  Identities=29%  Similarity=0.485  Sum_probs=40.7

Q ss_pred             HHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccC
Q psy691           77 RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDG  121 (134)
Q Consensus        77 ~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~  121 (134)
                      .|+++|.++++|.|..|++.|.....|.+|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            367789999999999999999999999999999999999999765

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.55  E-value=1.1e-15  Score=76.86  Aligned_cols=45  Identities=33%  Similarity=0.550  Sum_probs=39.6

Q ss_pred             HHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccC
Q psy691           77 RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDG  121 (134)
Q Consensus        77 ~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~  121 (134)
                      +|+++|.++++|.|..|++.|.....|.+|+++|+++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            367788899999999999999999999999999999999999765

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.54  E-value=1e-15  Score=77.02  Aligned_cols=44  Identities=32%  Similarity=0.517  Sum_probs=39.2

Q ss_pred             HHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccC
Q psy691           78 HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDG  121 (134)
Q Consensus        78 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~  121 (134)
                      |+++|.++++|.|..|++.|.....|.+|+++|+++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            66788899999999999999999999999999999999999765

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.54  E-value=6.4e-16  Score=77.78  Aligned_cols=45  Identities=31%  Similarity=0.536  Sum_probs=40.4

Q ss_pred             HHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccC
Q psy691           77 RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDG  121 (134)
Q Consensus        77 ~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~  121 (134)
                      +|+++|.++++|.|.+|++.|.....|.+|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            467789999999999999999999999999999999999999765

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.54  E-value=9.9e-16  Score=77.02  Aligned_cols=45  Identities=27%  Similarity=0.508  Sum_probs=39.8

Q ss_pred             HHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccC
Q psy691           77 RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDG  121 (134)
Q Consensus        77 ~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~  121 (134)
                      .|+++|.++++|.|.+|++.|.....|.+|+++|+++++|.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367788899999999999999999999999999999999999765

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.54  E-value=1.5e-15  Score=76.34  Aligned_cols=45  Identities=31%  Similarity=0.547  Sum_probs=41.2

Q ss_pred             HHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccC
Q psy691           77 RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDG  121 (134)
Q Consensus        77 ~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~  121 (134)
                      +|+++|.++++|.|..|++.|.....|.+|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999999765

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.54  E-value=8.7e-16  Score=77.23  Aligned_cols=45  Identities=33%  Similarity=0.555  Sum_probs=40.8

Q ss_pred             HHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccC
Q psy691           77 RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDG  121 (134)
Q Consensus        77 ~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~  121 (134)
                      +|+++|+++++|.|..|++.|.....|.+|+++|+++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            367789999999999999999999999999999999999999765

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.54  E-value=1e-15  Score=76.92  Aligned_cols=45  Identities=29%  Similarity=0.415  Sum_probs=40.4

Q ss_pred             HHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccC
Q psy691           77 RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDG  121 (134)
Q Consensus        77 ~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~  121 (134)
                      +|+++|.++++|.|..|++.|.....|.+|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367789999999999999999999999999999999999999765

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.54  E-value=1.5e-15  Score=76.32  Aligned_cols=45  Identities=36%  Similarity=0.676  Sum_probs=40.5

Q ss_pred             HHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccC
Q psy691           77 RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDG  121 (134)
Q Consensus        77 ~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~  121 (134)
                      +|+++|.++++|.|..|++.|.....|.+|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            467789999999999999999999999999999999999999765

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=2.5e-15  Score=87.28  Aligned_cols=64  Identities=13%  Similarity=0.046  Sum_probs=58.0

Q ss_pred             ccCChHHHHHHHHHcCCCCceecccccccc-cChhhHHHHHhHhcCCCccccccCCCcccCcccee
Q psy691           68 SFSLQRLLNRHMKCHSDVKRYLCTFCGKGF-NDTFDLKRHTRTHTGKEEEEEEDGKTNVLTTEYLV  132 (134)
Q Consensus        68 ~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f-~~~~~l~~H~~~h~~~~~~~c~~~~~~~~~~~~l~  132 (134)
                      .|.....|..|++.|.++++|.|..|++.| .....|..|+++| ++++|.|..|++.|.+...|.
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~   79 (96)
T 2ctd_A           15 VYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMK   79 (96)
T ss_dssp             SSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHH
T ss_pred             CCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHH
Confidence            445667888999999999999999999999 9999999999999 999999999999999887663

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.54  E-value=1.4e-15  Score=76.49  Aligned_cols=44  Identities=30%  Similarity=0.539  Sum_probs=38.3

Q ss_pred             HHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccC
Q psy691           78 HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDG  121 (134)
Q Consensus        78 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~  121 (134)
                      |+++|.++++|.|..|++.|.....|.+|+++|+++++|.|..|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            56778888999999999999999999999999999999998765

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.54  E-value=1.1e-15  Score=76.89  Aligned_cols=44  Identities=32%  Similarity=0.562  Sum_probs=39.0

Q ss_pred             HHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccC
Q psy691           78 HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDG  121 (134)
Q Consensus        78 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~  121 (134)
                      |+++|.++++|.|..|++.|.....|.+|+++|+++++|.|..|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56778889999999999999999999999999999999999765

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.54  E-value=1.2e-15  Score=76.61  Aligned_cols=45  Identities=29%  Similarity=0.388  Sum_probs=39.8

Q ss_pred             HHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccC
Q psy691           77 RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDG  121 (134)
Q Consensus        77 ~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~  121 (134)
                      .|+++|.++++|.|..|++.|.....|.+|+++|+++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            367788899999999999999999999999999999999999765

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.54  E-value=4.4e-16  Score=90.74  Aligned_cols=64  Identities=9%  Similarity=0.088  Sum_probs=57.3

Q ss_pred             cCChHHHHHHHHHcCCCCceeccccccccc-ChhhHHHHHhHhcC-CCccccccCCCcccCcccee
Q psy691           69 FSLQRLLNRHMKCHSDVKRYLCTFCGKGFN-DTFDLKRHTRTHTG-KEEEEEEDGKTNVLTTEYLV  132 (134)
Q Consensus        69 f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~-~~~~l~~H~~~h~~-~~~~~c~~~~~~~~~~~~l~  132 (134)
                      +.....+..|++.|.++++|.|..|++.|. ....|.+|+++|++ +++|.|..|++.|.+...|.
T Consensus         6 ~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~   71 (98)
T 2gqj_A            6 SGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLN   71 (98)
T ss_dssp             CCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHH
T ss_pred             CCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHH
Confidence            344456778999999999999999999999 99999999999999 99999999999999887663

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.54  E-value=1.6e-15  Score=76.25  Aligned_cols=44  Identities=25%  Similarity=0.356  Sum_probs=39.1

Q ss_pred             HHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccC
Q psy691           78 HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDG  121 (134)
Q Consensus        78 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~  121 (134)
                      |+++|.++++|.|..|++.|.....|..|+++|+++++|.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            66788899999999999999999999999999999999999765

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.54  E-value=1.7e-15  Score=76.14  Aligned_cols=44  Identities=27%  Similarity=0.496  Sum_probs=38.6

Q ss_pred             HHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccC
Q psy691           78 HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDG  121 (134)
Q Consensus        78 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~  121 (134)
                      |+++|.++++|.|..|++.|.....|.+|+++|+++++|.|..|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56778889999999999999999999999999999999998765

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.53  E-value=1.3e-15  Score=76.58  Aligned_cols=45  Identities=29%  Similarity=0.527  Sum_probs=41.0

Q ss_pred             HHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccC
Q psy691           77 RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDG  121 (134)
Q Consensus        77 ~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~  121 (134)
                      +|+++|+++++|.|..|++.|.....|..|+++|+++++|.|+.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCCC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            367889999999999999999999999999999999999999754

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.53  E-value=1.4e-15  Score=76.44  Aligned_cols=45  Identities=36%  Similarity=0.530  Sum_probs=39.6

Q ss_pred             HHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccC
Q psy691           77 RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDG  121 (134)
Q Consensus        77 ~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~  121 (134)
                      +|+++|.++++|.|..|++.|.....|..|+++|+++++|.|..|
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            367788899999999999999999999999999999999999765

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.53  E-value=1.2e-15  Score=76.77  Aligned_cols=44  Identities=34%  Similarity=0.693  Sum_probs=39.1

Q ss_pred             HHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccC
Q psy691           78 HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDG  121 (134)
Q Consensus        78 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~  121 (134)
                      |+++|.++++|.|..|++.|.....|.+|+++|+++++|.|..|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            66788899999999999999999999999999999999999765

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.53  E-value=1.2e-15  Score=76.67  Aligned_cols=45  Identities=36%  Similarity=0.616  Sum_probs=40.1

Q ss_pred             HHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccC
Q psy691           77 RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDG  121 (134)
Q Consensus        77 ~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~  121 (134)
                      +|+++|.++++|.|..|++.|.....|.+|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            367788999999999999999999999999999999999999765

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.53  E-value=1.9e-15  Score=76.03  Aligned_cols=43  Identities=28%  Similarity=0.502  Sum_probs=39.8

Q ss_pred             HHHHcCCCCceecccccccccChhhHHHHHhHhcCCCcccccc
Q psy691           78 HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEED  120 (134)
Q Consensus        78 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~  120 (134)
                      |+++|.++++|.|..|++.|.....|.+|+++|+++++|.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            6778999999999999999999999999999999999999975

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.53  E-value=1.6e-15  Score=76.29  Aligned_cols=44  Identities=32%  Similarity=0.480  Sum_probs=40.0

Q ss_pred             HHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccC
Q psy691           78 HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDG  121 (134)
Q Consensus        78 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~  121 (134)
                      |+++|.++++|.|..|++.|.....|.+|+++|+++++|.|+.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPSSG   46 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTTCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            67789999999999999999999999999999999999999753

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.53  E-value=1.9e-15  Score=75.97  Aligned_cols=44  Identities=27%  Similarity=0.477  Sum_probs=40.2

Q ss_pred             HHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCcccccc
Q psy691           77 RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEED  120 (134)
Q Consensus        77 ~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~  120 (134)
                      .|+++|.++++|.|..|++.|.....|.+|+++|+++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36778999999999999999999999999999999999999975

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.52  E-value=1.8e-15  Score=76.12  Aligned_cols=44  Identities=36%  Similarity=0.637  Sum_probs=38.0

Q ss_pred             HHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccC
Q psy691           78 HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDG  121 (134)
Q Consensus        78 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~  121 (134)
                      |+++|.++++|.|..|++.|.....|.+|+++|+++++|.|..|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            56778888899999999999999999999999999999988765

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.52  E-value=2.2e-15  Score=75.72  Aligned_cols=44  Identities=32%  Similarity=0.575  Sum_probs=39.2

Q ss_pred             HHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccC
Q psy691           78 HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDG  121 (134)
Q Consensus        78 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~  121 (134)
                      |+++|.++++|.|..|++.|.....|.+|+++|+++++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            66788899999999999999999999999999999999999754

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.52  E-value=1.1e-15  Score=76.83  Aligned_cols=45  Identities=29%  Similarity=0.576  Sum_probs=40.5

Q ss_pred             HHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccC
Q psy691           77 RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDG  121 (134)
Q Consensus        77 ~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~  121 (134)
                      +|+++|.++++|.|..|++.|.....|.+|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367789999999999999999999999999999999999999765

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.52  E-value=2.6e-15  Score=75.44  Aligned_cols=44  Identities=25%  Similarity=0.475  Sum_probs=40.2

Q ss_pred             HHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCcccccc
Q psy691           77 RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEED  120 (134)
Q Consensus        77 ~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~  120 (134)
                      .|+++|.++++|.|..|++.|.....|.+|+++|+++++|.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            36788999999999999999999999999999999999999974

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.52  E-value=2.4e-15  Score=75.58  Aligned_cols=44  Identities=27%  Similarity=0.521  Sum_probs=40.2

Q ss_pred             HHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCcccccc
Q psy691           77 RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEED  120 (134)
Q Consensus        77 ~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~  120 (134)
                      +|+++|.++++|.|..|++.|.....|.+|+++|+++++|.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            46778999999999999999999999999999999999999975

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.52  E-value=2.5e-15  Score=75.55  Aligned_cols=45  Identities=31%  Similarity=0.547  Sum_probs=41.0

Q ss_pred             HHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccC
Q psy691           77 RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDG  121 (134)
Q Consensus        77 ~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~  121 (134)
                      +|+++|.++++|.|..|++.|.....|.+|+++|+++++|.|+.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            467889999999999999999999999999999999999999753

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.52  E-value=2.2e-16  Score=86.76  Aligned_cols=63  Identities=21%  Similarity=0.347  Sum_probs=56.8

Q ss_pred             CCCCCCCceeccccccccCChHHHHHHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccC
Q psy691           52 TGRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDG  121 (134)
Q Consensus        52 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~  121 (134)
                      ....++++|.|.+|++.|.....|..       +++|.|..|++.|.....|..|+++|+++++|.|+.|
T Consensus        11 ~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A           11 KIHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CCCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             HHhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            34556789999999999999888875       7899999999999999999999999999999999865

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.52  E-value=2.6e-15  Score=75.40  Aligned_cols=45  Identities=31%  Similarity=0.541  Sum_probs=40.8

Q ss_pred             HHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccC
Q psy691           77 RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDG  121 (134)
Q Consensus        77 ~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~  121 (134)
                      .|+++|.++++|.|..|++.|.....|.+|+++|++++||.|+.+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~~   46 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTTC
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            367889999999999999999999999999999999999999753

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.52  E-value=1.8e-15  Score=76.09  Aligned_cols=44  Identities=27%  Similarity=0.440  Sum_probs=40.4

Q ss_pred             HHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCcccccc
Q psy691           77 RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEED  120 (134)
Q Consensus        77 ~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~  120 (134)
                      +|+++|.++++|.|..|++.|.....|.+|+++|+++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            46788999999999999999999999999999999999999964

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.52  E-value=2.2e-15  Score=75.80  Aligned_cols=44  Identities=27%  Similarity=0.534  Sum_probs=40.1

Q ss_pred             HHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccC
Q psy691           78 HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDG  121 (134)
Q Consensus        78 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~  121 (134)
                      |+++|.++++|.|..|++.|.....|.+|+++|+++++|.|+.+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSCC
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCCC
Confidence            56789999999999999999999999999999999999999753

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.52  E-value=1.7e-14  Score=87.73  Aligned_cols=72  Identities=17%  Similarity=0.308  Sum_probs=58.2

Q ss_pred             CCceeccccccccC------ChHHHHHHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccCCCcccCccc
Q psy691           57 NTRFACHLCSKSFS------LQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDGKTNVLTTEY  130 (134)
Q Consensus        57 ~~~~~C~~C~~~f~------~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~~~~~~  130 (134)
                      .+.+.|++|.+.|.      ....|..|+ .|++++||.|..|++.|.....|..|+++|  +++|.|..|++.|.+...
T Consensus        39 ~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~  115 (129)
T 2wbt_A           39 QKRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDS  115 (129)
T ss_dssp             HHHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHH
T ss_pred             hCcccchhhhcccCCCcccCCHHHHHHHH-HhCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHH
Confidence            45577888776665      566676666 588889999999999999999999999988  888999888888888766


Q ss_pred             e
Q psy691          131 L  131 (134)
Q Consensus       131 l  131 (134)
                      |
T Consensus       116 l  116 (129)
T 2wbt_A          116 A  116 (129)
T ss_dssp             H
T ss_pred             H
Confidence            5

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.52  E-value=2.7e-15  Score=75.36  Aligned_cols=44  Identities=32%  Similarity=0.577  Sum_probs=40.4

Q ss_pred             HHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCcccccc
Q psy691           77 RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEED  120 (134)
Q Consensus        77 ~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~  120 (134)
                      .|+++|.++++|.|..|++.|.....|.+|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            36778999999999999999999999999999999999999975

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=2.5e-15  Score=75.54  Aligned_cols=44  Identities=30%  Similarity=0.478  Sum_probs=40.1

Q ss_pred             HHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCcccccc
Q psy691           77 RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEED  120 (134)
Q Consensus        77 ~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~  120 (134)
                      .|+++|.++++|.|..|++.|.....|.+|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            36778999999999999999999999999999999999999975

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.51  E-value=3e-15  Score=73.75  Aligned_cols=42  Identities=33%  Similarity=0.525  Sum_probs=38.0

Q ss_pred             HHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccc
Q psy691           78 HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEE  119 (134)
Q Consensus        78 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~  119 (134)
                      |+++|.++++|.|..|++.|.....|.+|+++|+++++|.|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            567789999999999999999999999999999999999984

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=3.3e-15  Score=75.05  Aligned_cols=44  Identities=27%  Similarity=0.468  Sum_probs=40.0

Q ss_pred             HHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCcccccc
Q psy691           77 RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEED  120 (134)
Q Consensus        77 ~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~  120 (134)
                      +|+++|.++++|.|..|++.|.....|.+|+++|+++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            36778999999999999999999999999999999999999964

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=2.7e-15  Score=75.36  Aligned_cols=44  Identities=34%  Similarity=0.578  Sum_probs=40.5

Q ss_pred             HHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCcccccc
Q psy691           77 RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEED  120 (134)
Q Consensus        77 ~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~  120 (134)
                      +|+++|+++++|.|..|++.|.....|.+|+++|+++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            36778999999999999999999999999999999999999975

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=2.9e-15  Score=75.31  Aligned_cols=44  Identities=27%  Similarity=0.551  Sum_probs=39.7

Q ss_pred             HHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccC
Q psy691           78 HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDG  121 (134)
Q Consensus        78 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~  121 (134)
                      |+++|.++++|.|..|++.|.....|.+|+++|+++++|.|+.+
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56778999999999999999999999999999999999999753

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=2.9e-15  Score=75.24  Aligned_cols=45  Identities=31%  Similarity=0.573  Sum_probs=40.6

Q ss_pred             HHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccC
Q psy691           77 RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDG  121 (134)
Q Consensus        77 ~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~  121 (134)
                      +|+++|.++++|.|..|++.|.....|.+|+++|+++++|.|+.+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCCC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367789999999999999999999999999999999999999753

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=3.2e-15  Score=75.14  Aligned_cols=44  Identities=30%  Similarity=0.539  Sum_probs=40.2

Q ss_pred             HHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCcccccc
Q psy691           77 RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEED  120 (134)
Q Consensus        77 ~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~  120 (134)
                      .|+++|.++++|.|..|++.|.....|.+|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            36778999999999999999999999999999999999999975

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=3e-15  Score=75.48  Aligned_cols=44  Identities=34%  Similarity=0.532  Sum_probs=39.3

Q ss_pred             HHHHcCCCCceecccccccccChhhHHHHHh-HhcCCCccccccC
Q psy691           78 HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTR-THTGKEEEEEEDG  121 (134)
Q Consensus        78 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~c~~~  121 (134)
                      |+++|.++++|.|..|++.|.....|.+|++ +|+++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            6778889999999999999999999999999 8999999999765

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.51  E-value=2.4e-15  Score=78.22  Aligned_cols=52  Identities=12%  Similarity=0.096  Sum_probs=48.1

Q ss_pred             ccccCChHHHHHHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccc
Q psy691           66 SKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEE  117 (134)
Q Consensus        66 ~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  117 (134)
                      ++.|.....|..|++.|.++++|.|..|++.|.....|..|+++|++++||.
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            4667788889999999999999999999999999999999999999999974

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.50  E-value=3.3e-14  Score=82.54  Aligned_cols=59  Identities=24%  Similarity=0.556  Sum_probs=54.7

Q ss_pred             CCCCCceecc--ccccccCChHHHHHHHHHcCCCCceecccccccccChhhHHHHHhHhcC
Q psy691           54 RKDNTRFACH--LCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG  112 (134)
Q Consensus        54 ~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~  112 (134)
                      ..+.++|.|.  .|++.|.....|..|++.|.++++|.|..|++.|.....|..|+++|++
T Consensus        40 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~  100 (100)
T 2ebt_A           40 HTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQN  100 (100)
T ss_dssp             HSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHHHHHHHHCC
T ss_pred             hCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHHHHHHHhCC
Confidence            3456789996  5999999999999999999999999999999999999999999999975

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=3.6e-15  Score=74.89  Aligned_cols=44  Identities=30%  Similarity=0.486  Sum_probs=40.2

Q ss_pred             HHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCcccccc
Q psy691           77 RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEED  120 (134)
Q Consensus        77 ~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~  120 (134)
                      +|+++|.++++|.|..|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36778999999999999999999999999999999999999974

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=3e-15  Score=75.24  Aligned_cols=44  Identities=27%  Similarity=0.474  Sum_probs=40.2

Q ss_pred             HHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCcccccc
Q psy691           77 RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEED  120 (134)
Q Consensus        77 ~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~  120 (134)
                      .|+++|.++++|.|..|++.|.....|.+|+++|+++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36778999999999999999999999999999999999999974

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=4.3e-15  Score=74.68  Aligned_cols=44  Identities=25%  Similarity=0.421  Sum_probs=39.7

Q ss_pred             HHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCcccccc
Q psy691           77 RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEED  120 (134)
Q Consensus        77 ~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~  120 (134)
                      .|+++|.++++|.|..|++.|.....|.+|+++|+++++|.|+.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            36778999999999999999999999999999999999999974

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=3.9e-15  Score=74.74  Aligned_cols=44  Identities=30%  Similarity=0.474  Sum_probs=39.8

Q ss_pred             HHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCcccccc
Q psy691           77 RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEED  120 (134)
Q Consensus        77 ~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~  120 (134)
                      .|+++|.++++|.|..|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36778999999999999999999999999999999999999964

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=3.2e-15  Score=75.10  Aligned_cols=44  Identities=30%  Similarity=0.488  Sum_probs=40.0

Q ss_pred             HHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCcccccc
Q psy691           77 RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEED  120 (134)
Q Consensus        77 ~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~  120 (134)
                      .|+++|.++++|.|..|++.|.....|.+|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            36778999999999999999999999999999999999999974

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.50  E-value=3.7e-14  Score=81.66  Aligned_cols=61  Identities=28%  Similarity=0.707  Sum_probs=55.0

Q ss_pred             CCCCCceeccccccccCChHHHHHHHHHcCCC--CceecccccccccChhhHHHHHh-HhcCCC
Q psy691           54 RKDNTRFACHLCSKSFSLQRLLNRHMKCHSDV--KRYLCTFCGKGFNDTFDLKRHTR-THTGKE  114 (134)
Q Consensus        54 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~--k~~~C~~C~~~f~~~~~l~~H~~-~h~~~~  114 (134)
                      ..+.++|.|.+|++.|.....|..|++.|.++  ++|.|..|++.|.....|..|++ .|.++.
T Consensus        30 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~   93 (95)
T 2yt9_A           30 HSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHSGPS   93 (95)
T ss_dssp             SCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHHHHHHTSCCCS
T ss_pred             cCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHHHHHHhcCCCC
Confidence            34567899999999999999999999999987  99999999999999999999986 687753

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=3.8e-15  Score=74.83  Aligned_cols=43  Identities=23%  Similarity=0.475  Sum_probs=39.2

Q ss_pred             HHHHcCCCCceecccccccccChhhHHHHHhHhcCCCcccccc
Q psy691           78 HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEED  120 (134)
Q Consensus        78 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~  120 (134)
                      |+++|.++++|.|..|++.|.....|.+|+++|+++++|.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            6778999999999999999999999999999999999999964

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=5e-15  Score=72.88  Aligned_cols=42  Identities=29%  Similarity=0.404  Sum_probs=37.4

Q ss_pred             HHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccc
Q psy691           78 HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEE  119 (134)
Q Consensus        78 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~  119 (134)
                      |+++|.++++|.|..|++.|.....|.+|+++|+++++|.|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            466788999999999999999999999999999999999884

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=3e-15  Score=75.22  Aligned_cols=45  Identities=27%  Similarity=0.494  Sum_probs=40.7

Q ss_pred             HHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccC
Q psy691           77 RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDG  121 (134)
Q Consensus        77 ~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~  121 (134)
                      +|+++|.++++|.|..|++.|.....|.+|+++|+++++|.|+.+
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSCCC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            367789999999999999999999999999999999999999753

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.49  E-value=9.2e-15  Score=82.93  Aligned_cols=52  Identities=17%  Similarity=0.234  Sum_probs=47.9

Q ss_pred             HcCCCCceecccccccccChhhHHHHHhHhcCCCccccccCCCcccCcccee
Q psy691           81 CHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDGKTNVLTTEYLV  132 (134)
Q Consensus        81 ~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~~~~~~l~  132 (134)
                      .+...++|.|.+|++.|.....|.+|+++|++++||.|..|++.|.++..|.
T Consensus        22 ~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~   73 (85)
T 2lv2_A           22 LSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLT   73 (85)
T ss_dssp             SCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHH
T ss_pred             CCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHH
Confidence            4667789999999999999999999999999999999999999999987764

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=4.5e-15  Score=74.51  Aligned_cols=44  Identities=30%  Similarity=0.477  Sum_probs=40.3

Q ss_pred             HHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCcccccc
Q psy691           77 RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEED  120 (134)
Q Consensus        77 ~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~  120 (134)
                      +|+++|.++++|.|..|++.|.....|.+|+++|+++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36778999999999999999999999999999999999999964

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=5.1e-15  Score=73.61  Aligned_cols=43  Identities=26%  Similarity=0.436  Sum_probs=39.3

Q ss_pred             HHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccc
Q psy691           77 RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEE  119 (134)
Q Consensus        77 ~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~  119 (134)
                      .|+++|.++++|.|..|++.|.....|.+|+++|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            3678899999999999999999999999999999999999984

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=7.5e-15  Score=72.97  Aligned_cols=43  Identities=33%  Similarity=0.490  Sum_probs=38.7

Q ss_pred             HHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccc
Q psy691           77 RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEE  119 (134)
Q Consensus        77 ~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~  119 (134)
                      .|+++|.++++|.|..|++.|.....|..|+++|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            3677899999999999999999999999999999999999884

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=4.3e-15  Score=74.63  Aligned_cols=44  Identities=20%  Similarity=0.382  Sum_probs=40.6

Q ss_pred             HHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCcccccc
Q psy691           77 RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEED  120 (134)
Q Consensus        77 ~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~  120 (134)
                      +|+++|.++++|.|..|++.|.....|.+|+++|+++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCSC
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            46788999999999999999999999999999999999999964

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.48  E-value=2.4e-15  Score=91.53  Aligned_cols=57  Identities=26%  Similarity=0.475  Sum_probs=53.8

Q ss_pred             CCCCceeccccccccCChHHHHHHHHHcCCCCceecccccccccChhhHHHHHhHhcCC
Q psy691           55 KDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGK  113 (134)
Q Consensus        55 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~  113 (134)
                      .++++|.|.+|++.|.....|..|+++|  ++||.|..|++.|.....|.+|+++|++.
T Consensus        70 ~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           70 KAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             HHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             CCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            3467899999999999999999999999  89999999999999999999999999985

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=5.9e-15  Score=73.36  Aligned_cols=43  Identities=35%  Similarity=0.560  Sum_probs=39.1

Q ss_pred             HHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccc
Q psy691           77 RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEE  119 (134)
Q Consensus        77 ~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~  119 (134)
                      .|+++|.++++|.|..|++.|.....|..|+++|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            3677899999999999999999999999999999999999984

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.47  E-value=1.1e-14  Score=79.96  Aligned_cols=54  Identities=30%  Similarity=0.407  Sum_probs=49.8

Q ss_pred             HHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccCCCcccCcccee
Q psy691           79 MKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDGKTNVLTTEYLV  132 (134)
Q Consensus        79 ~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~~~~~~l~  132 (134)
                      .++|.++++|.|.+|++.|.....|.+|+++|+++++|.|..|.+.|.+...|.
T Consensus         6 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~   59 (72)
T 1x6e_A            6 SGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLI   59 (72)
T ss_dssp             CCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHH
T ss_pred             CcccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHH
Confidence            457899999999999999999999999999999999999999999999887663

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.47  E-value=6.8e-14  Score=79.56  Aligned_cols=58  Identities=22%  Similarity=0.524  Sum_probs=53.7

Q ss_pred             CCCCCceecc--ccccccCChHHHHHHHHHcCCCCceecccccccccChhhHHHHHhHhc
Q psy691           54 RKDNTRFACH--LCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHT  111 (134)
Q Consensus        54 ~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~  111 (134)
                      ..+.++|.|+  .|++.|.....|..|++.|.++++|.|..|++.|.....|..|+++|.
T Consensus        30 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~   89 (89)
T 2wbs_A           30 HTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRHF   89 (89)
T ss_dssp             SCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHGGGGC
T ss_pred             cCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHHHHHHhhC
Confidence            4456789997  599999999999999999999999999999999999999999999984

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.47  E-value=8.4e-15  Score=72.86  Aligned_cols=43  Identities=21%  Similarity=0.345  Sum_probs=38.9

Q ss_pred             HHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccc
Q psy691           77 RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEE  119 (134)
Q Consensus        77 ~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~  119 (134)
                      +|+++|.+++||.|..|++.|.....|.+|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            3677899999999999999999999999999999999999884

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.47  E-value=4.6e-14  Score=83.45  Aligned_cols=58  Identities=31%  Similarity=0.605  Sum_probs=54.6

Q ss_pred             CCCCceeccccccccCChHHHHHHHHHcCCCCceecccccccccChhhHHHHHhHhcC
Q psy691           55 KDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG  112 (134)
Q Consensus        55 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~  112 (134)
                      ...++|.|.+|++.|.....|..|++.|.++++|.|.+|++.|.....|.+|++.|+.
T Consensus        33 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~   90 (110)
T 2csh_A           33 LGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRHVTSCTK   90 (110)
T ss_dssp             SCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHHHHHHHHHH
T ss_pred             CCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHHHHHHHccc
Confidence            3457899999999999999999999999999999999999999999999999999875

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=6.7e-15  Score=72.46  Aligned_cols=41  Identities=27%  Similarity=0.459  Sum_probs=37.8

Q ss_pred             HHHHcCCCCceecccccccccChhhHHHHHhHhcCCCcccc
Q psy691           78 HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEE  118 (134)
Q Consensus        78 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c  118 (134)
                      |+++|.+++||.|..|++.|.....|.+|+++|+++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            56788999999999999999999999999999999999987

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.47  E-value=2.1e-15  Score=83.94  Aligned_cols=58  Identities=22%  Similarity=0.253  Sum_probs=51.5

Q ss_pred             HHHHHHHcCCCCceecccccccccChhhHHHHHh-HhcCC-CccccccCCCcccCcccee
Q psy691           75 LNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTR-THTGK-EEEEEEDGKTNVLTTEYLV  132 (134)
Q Consensus        75 l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~-~h~~~-~~~~c~~~~~~~~~~~~l~  132 (134)
                      |.+|+++|.++++|.|.+|++.|.....|.+|++ .|.++ ++|.|..|++.|.+...|.
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~   62 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG   62 (77)
T ss_dssp             CCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHH
T ss_pred             CCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHH
Confidence            4468899999999999999999999999999997 67775 8999999999999887663

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.47  E-value=1e-14  Score=72.52  Aligned_cols=43  Identities=28%  Similarity=0.400  Sum_probs=39.4

Q ss_pred             HHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccc
Q psy691           77 RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEE  119 (134)
Q Consensus        77 ~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~  119 (134)
                      +|+++|.++++|.|..|++.|.....|..|+++|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            4678899999999999999999999999999999999999984

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.46  E-value=1e-14  Score=71.72  Aligned_cols=41  Identities=24%  Similarity=0.417  Sum_probs=36.6

Q ss_pred             HHHHcCCCCceecccccccccChhhHHHHHhHhcCCCcccc
Q psy691           78 HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEE  118 (134)
Q Consensus        78 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c  118 (134)
                      |+++|.++++|.|..|++.|.....|..|+++|++++||.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            56678889999999999999999999999999999999987

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=1.1e-14  Score=73.17  Aligned_cols=43  Identities=30%  Similarity=0.503  Sum_probs=34.4

Q ss_pred             HHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccC
Q psy691           79 MKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDG  121 (134)
Q Consensus        79 ~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~  121 (134)
                      +++|.++++|.|..|++.|.....|.+|+++|+++++|.|..|
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            4 GSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            3467788888888888888888888888888888888888755

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.46  E-value=7.9e-15  Score=72.22  Aligned_cols=41  Identities=32%  Similarity=0.540  Sum_probs=37.9

Q ss_pred             HHHHcCCCCceecccccccccChhhHHHHHhHhcCCCcccc
Q psy691           78 HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEE  118 (134)
Q Consensus        78 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c  118 (134)
                      |+++|.++++|.|..|++.|.....|.+|+++|+++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            56788999999999999999999999999999999999987

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=5.7e-15  Score=72.69  Aligned_cols=41  Identities=32%  Similarity=0.506  Sum_probs=38.1

Q ss_pred             HHHHcCCCCceecccccccccChhhHHHHHhHhcCCCcccc
Q psy691           78 HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEE  118 (134)
Q Consensus        78 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c  118 (134)
                      |+++|.++++|.|..|++.|.....|.+|+++|+++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            67789999999999999999999999999999999999987

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.46  E-value=8.5e-14  Score=72.28  Aligned_cols=45  Identities=27%  Similarity=0.486  Sum_probs=29.3

Q ss_pred             CCCCceeccccccccCChHHHHHHHH-HcCCCCceecccccccccC
Q psy691           55 KDNTRFACHLCSKSFSLQRLLNRHMK-CHSDVKRYLCTFCGKGFND   99 (134)
Q Consensus        55 ~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~k~~~C~~C~~~f~~   99 (134)
                      ..+++|.|.+|++.|.....|..|++ +|.++++|.|.+|++.|.+
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            8 SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            34456666666666666666666665 5666666666666666654

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=1.3e-14  Score=72.92  Aligned_cols=43  Identities=30%  Similarity=0.552  Sum_probs=35.7

Q ss_pred             HHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccC
Q psy691           79 MKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDG  121 (134)
Q Consensus        79 ~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~  121 (134)
                      +++|.++++|.|..|++.|.....|.+|+++|+++++|.|..|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3567888888888888888888888888888888888888765

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.45  E-value=1.5e-14  Score=71.90  Aligned_cols=42  Identities=21%  Similarity=0.283  Sum_probs=37.0

Q ss_pred             HHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccc
Q psy691           78 HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEE  119 (134)
Q Consensus        78 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~  119 (134)
                      |+++|.++++|.|..|++.|.....|..|+++|+++++|.|+
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            566788899999999999999999999999999999999884

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.45  E-value=6.9e-14  Score=72.62  Aligned_cols=47  Identities=28%  Similarity=0.433  Sum_probs=43.5

Q ss_pred             HcCCCCceecccccccccChhhHHHHHh-HhcCCCccccccCCCcccC
Q psy691           81 CHSDVKRYLCTFCGKGFNDTFDLKRHTR-THTGKEEEEEEDGKTNVLT  127 (134)
Q Consensus        81 ~h~~~k~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~c~~~~~~~~~  127 (134)
                      .|.++++|.|..|++.|.....|.+|++ +|+++++|.|..|++.|.+
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            4678899999999999999999999997 8999999999999998865

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.44  E-value=1.5e-14  Score=72.64  Aligned_cols=42  Identities=24%  Similarity=0.330  Sum_probs=38.5

Q ss_pred             HHHHcCCCCceecccccccccChhhHHHHHhHhcC-CCccccc
Q psy691           78 HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG-KEEEEEE  119 (134)
Q Consensus        78 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~c~  119 (134)
                      |+++|.+++||.|..|++.|.....|..|+++|++ +++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            67788999999999999999999999999999999 9999985

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.44  E-value=3.5e-14  Score=77.50  Aligned_cols=52  Identities=15%  Similarity=0.129  Sum_probs=48.1

Q ss_pred             HcCCCCceecccccccccChhhHHHHHhHhcCCCccccccCCCcccCcccee
Q psy691           81 CHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDGKTNVLTTEYLV  132 (134)
Q Consensus        81 ~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~~~~~~l~  132 (134)
                      .|.++++|.|..|++.|.....|.+|+++|+++++|.|..|++.|.+...|.
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~   54 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLS   54 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHH
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHH
Confidence            4778999999999999999999999999999999999999999999877663

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.44  E-value=3.2e-14  Score=71.40  Aligned_cols=42  Identities=24%  Similarity=0.382  Sum_probs=35.8

Q ss_pred             HHHcCCCCceecccccccccChhhHHHHHhHhcCCCcccccc
Q psy691           79 MKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEED  120 (134)
Q Consensus        79 ~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~  120 (134)
                      ++.|.++++|.|..|++.|.....|.+|+++|+++++|.|+.
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            456888888999999999999999999998999999998864

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=2.5e-14  Score=71.17  Aligned_cols=42  Identities=33%  Similarity=0.387  Sum_probs=38.4

Q ss_pred             HHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCcccc
Q psy691           77 RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEE  118 (134)
Q Consensus        77 ~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c  118 (134)
                      .|+++|.++++|.|..|++.|.....|..|+++|+++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            367789999999999999999999999999999999999987

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=1.2e-14  Score=72.28  Aligned_cols=43  Identities=35%  Similarity=0.604  Sum_probs=38.6

Q ss_pred             HHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccc
Q psy691           77 RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEE  119 (134)
Q Consensus        77 ~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~  119 (134)
                      .|+++|.++++|.|..|++.|.....|.+|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3677899999999999999999999999999999999999883

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.43  E-value=3.7e-15  Score=79.75  Aligned_cols=54  Identities=13%  Similarity=0.098  Sum_probs=43.3

Q ss_pred             HHHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccCCCcccCcccee
Q psy691           76 NRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDGKTNVLTTEYLV  132 (134)
Q Consensus        76 ~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~~~~~~l~  132 (134)
                      ..|+++|.+++||.|..|++.|.....|.   ++|+++++|.|..|++.|...+.+.
T Consensus         3 ~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~   56 (62)
T 1vd4_A            3 ETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAM   56 (62)
T ss_dssp             CCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTCS
T ss_pred             hhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCcccc
Confidence            35677888888888888888888877775   6788888888888888887776554

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.42  E-value=3.7e-14  Score=74.21  Aligned_cols=49  Identities=29%  Similarity=0.417  Sum_probs=42.4

Q ss_pred             CCCceecccccccccChhhHHHHHhHhcCCCccccccCCCcccCcccee
Q psy691           84 DVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDGKTNVLTTEYLV  132 (134)
Q Consensus        84 ~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~~~~~~l~  132 (134)
                      ++++|.|..|++.|.....|..|+++|+++++|.|..|+..|.+...|.
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   49 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLR   49 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHH
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHH
Confidence            4689999999999999999999999999999999999999998887663

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.42  E-value=1.2e-13  Score=68.95  Aligned_cols=41  Identities=27%  Similarity=0.489  Sum_probs=29.2

Q ss_pred             HcCCCCceecccccccccChhhHHHHHhHhcCCCccccccC
Q psy691           81 CHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDG  121 (134)
Q Consensus        81 ~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~  121 (134)
                      .|+++++|.|..|++.|.....|.+|+++|+++++|.|+.|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~c   44 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSS   44 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCC
Confidence            36667777777777777777777777777777777777655

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.42  E-value=2.1e-14  Score=77.41  Aligned_cols=54  Identities=13%  Similarity=0.166  Sum_probs=48.2

Q ss_pred             HHHcCCCCceecccccccccChhhHHHHHhH-h-cCCCccccccCCCcccCcccee
Q psy691           79 MKCHSDVKRYLCTFCGKGFNDTFDLKRHTRT-H-TGKEEEEEEDGKTNVLTTEYLV  132 (134)
Q Consensus        79 ~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~-h-~~~~~~~c~~~~~~~~~~~~l~  132 (134)
                      +++|.++++|.|..|++.|.....|..|++. | .++++|.|+.|++.|.+...|.
T Consensus         2 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~   57 (66)
T 2drp_A            2 EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMT   57 (66)
T ss_dssp             -CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHH
T ss_pred             ccccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHH
Confidence            3568899999999999999999999999998 7 5899999999999999887663

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.42  E-value=1.3e-13  Score=69.81  Aligned_cols=41  Identities=32%  Similarity=0.463  Sum_probs=22.8

Q ss_pred             CCCCceeccccccccCChHHHHHHHHHcCCCCceecccccc
Q psy691           55 KDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGK   95 (134)
Q Consensus        55 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~   95 (134)
                      ..+++|.|.+|++.|.....|..|+++|++++||.|.+|++
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            8 RTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            33445555555555555555555555555555555555543

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.41  E-value=1.9e-13  Score=69.13  Aligned_cols=43  Identities=28%  Similarity=0.560  Sum_probs=39.6

Q ss_pred             HcCCCCceecccccccccChhhHHHHHhHhcCCCccccccCCC
Q psy691           81 CHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDGKT  123 (134)
Q Consensus        81 ~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~  123 (134)
                      .|.++++|.|.+|++.|.....|.+|+++|+++++|.|..|++
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            6 SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            3678899999999999999999999999999999999987753

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.40  E-value=1.8e-14  Score=81.45  Aligned_cols=58  Identities=16%  Similarity=0.205  Sum_probs=52.0

Q ss_pred             HHHHHHHcCCCCceecccccccccChhhHHHHHhHhcCC----CccccccCCCcccCcccee
Q psy691           75 LNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGK----EEEEEEDGKTNVLTTEYLV  132 (134)
Q Consensus        75 l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~----~~~~c~~~~~~~~~~~~l~  132 (134)
                      |.+|+++|.++++|.|..|++.|.....|.+|++.|+++    ++|.|..|.+.|.+...|.
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~   64 (86)
T 1x6h_A            3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMA   64 (86)
T ss_dssp             TTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHH
T ss_pred             cccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHH
Confidence            557899999999999999999999999999999987765    7899999999998877663

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.40  E-value=5.9e-14  Score=78.13  Aligned_cols=52  Identities=17%  Similarity=0.179  Sum_probs=47.7

Q ss_pred             HcCCCCceecccccccccChhhHHHHHhHhcC---CCccccccCCCcccCcccee
Q psy691           81 CHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG---KEEEEEEDGKTNVLTTEYLV  132 (134)
Q Consensus        81 ~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~c~~~~~~~~~~~~l~  132 (134)
                      .|+++++|.|.+|++.|.....|.+|+++|++   +++|.|..|++.|.+...|.
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~   55 (78)
T 2d9h_A            1 GSSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVA   55 (78)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHH
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHH
Confidence            37899999999999999999999999999996   89999999999999887663

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.40  E-value=1.2e-13  Score=67.54  Aligned_cols=39  Identities=33%  Similarity=0.537  Sum_probs=33.9

Q ss_pred             HHcCCCCceecccccccccChhhHHHHHhHhcCCCcccc
Q psy691           80 KCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEE  118 (134)
Q Consensus        80 ~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c  118 (134)
                      ++|.++++|.|..|++.|.....|..|+++|++++||.|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            357888899999999999999999999999999998887

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.39  E-value=1.3e-13  Score=68.17  Aligned_cols=39  Identities=23%  Similarity=0.402  Sum_probs=32.9

Q ss_pred             HcCCCCceecccccccccChhhHHHHHhHhcCCCccccc
Q psy691           81 CHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEE  119 (134)
Q Consensus        81 ~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~  119 (134)
                      +|.++++|.|..|++.|.....|.+|+++|+++++|.|+
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            4 GSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             CcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            577888888888888888888888888888888888885

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=5.1e-14  Score=70.31  Aligned_cols=40  Identities=33%  Similarity=0.602  Sum_probs=33.2

Q ss_pred             HHcCCCCceecccccccccChhhHHHHHhHhcCCCccccc
Q psy691           80 KCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEE  119 (134)
Q Consensus        80 ~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~  119 (134)
                      ++|.++++|.|..|++.|.....|.+|+++|+++++|.|+
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            5 SSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            4577888888888888888888888888888888888885

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=7e-14  Score=70.65  Aligned_cols=43  Identities=30%  Similarity=0.551  Sum_probs=34.8

Q ss_pred             HHHcCCCCceecc--cccccccChhhHHHHHhHhcCCCccccccC
Q psy691           79 MKCHSDVKRYLCT--FCGKGFNDTFDLKRHTRTHTGKEEEEEEDG  121 (134)
Q Consensus        79 ~~~h~~~k~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~  121 (134)
                      .++|.++++|.|.  .|++.|.....|.+|+++|+++++|.|..|
T Consensus         4 ~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            4 GSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4567788888887  788888888888888888888888888755

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.38  E-value=1.7e-13  Score=75.52  Aligned_cols=52  Identities=21%  Similarity=0.250  Sum_probs=48.0

Q ss_pred             HcCCCCceecccccccccChhhHHHHHhHhcCCCccccccCCCcccCcccee
Q psy691           81 CHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDGKTNVLTTEYLV  132 (134)
Q Consensus        81 ~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~~~~~~l~  132 (134)
                      .+.++++|.|..|++.|.....|..|+++|+++++|.|..|++.|.+...|.
T Consensus        11 ~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~   62 (74)
T 2lce_A           11 MTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLK   62 (74)
T ss_dssp             CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHH
T ss_pred             ccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHH
Confidence            4678899999999999999999999999999999999999999999887663

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.36  E-value=7.2e-14  Score=83.25  Aligned_cols=61  Identities=18%  Similarity=0.209  Sum_probs=55.0

Q ss_pred             ceecccccccc--CChHHHHHHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccc
Q psy691           59 RFACHLCSKSF--SLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEE  119 (134)
Q Consensus        59 ~~~C~~C~~~f--~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~  119 (134)
                      .+.|.+|++.|  .....|..|+++|.++++|.|.+|++.|.....|.+|+++|+..+...++
T Consensus        50 ~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~hh~~~~~~~~  112 (115)
T 2dmi_A           50 HETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVSGP  112 (115)
T ss_dssp             CCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCSSSCCBCSSHHHHHHHHHHTTTTTCSCCC
T ss_pred             CccCCCCCcccccccHHHHHHHhhccCCCcceECCCCCCccCCHHHHHHHHHHhCCcccCCCC
Confidence            34599999999  88999999999999999999999999999999999999998887665554

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.35  E-value=2.5e-13  Score=71.77  Aligned_cols=47  Identities=23%  Similarity=0.468  Sum_probs=43.6

Q ss_pred             CceecccccccccChhhHHHHHhHhcCCCccccccCCCcccCcccee
Q psy691           86 KRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDGKTNVLTTEYLV  132 (134)
Q Consensus        86 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~~~~~~l~  132 (134)
                      +||.|..|++.|.....|..|+++|+++++|.|..|+..|.+...|.
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   47 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLI   47 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHH
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHH
Confidence            58999999999999999999999999999999999999998877653

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.33  E-value=4.2e-13  Score=74.46  Aligned_cols=52  Identities=31%  Similarity=0.613  Sum_probs=47.6

Q ss_pred             HcCCCCceecccccccccChhhHHHHHhHhcCCCccccccCCCcccCcccee
Q psy691           81 CHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDGKTNVLTTEYLV  132 (134)
Q Consensus        81 ~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~~~~~~l~  132 (134)
                      .+.++++|.|..|++.|.....|.+|+++|+++++|.|..|++.|.+...|.
T Consensus        12 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~   63 (77)
T 2cot_A           12 QQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLI   63 (77)
T ss_dssp             CCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHH
T ss_pred             cCCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHH
Confidence            4567899999999999999999999999999999999999999999887663

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.32  E-value=2.2e-12  Score=64.23  Aligned_cols=42  Identities=17%  Similarity=0.411  Sum_probs=38.5

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceeccccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCG   94 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~   94 (134)
                      ...++++|.|.+|++.|.....|..|+++|+++++|.|..|+
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            345677899999999999999999999999999999999986

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.31  E-value=3.2e-12  Score=63.84  Aligned_cols=42  Identities=21%  Similarity=0.286  Sum_probs=38.3

Q ss_pred             CCCCCCCceeccccccccCChHHHHHHHHHcCCCCceecccc
Q psy691           52 TGRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFC   93 (134)
Q Consensus        52 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C   93 (134)
                      ....++++|.|.+|++.|.....|..|++.|++++||.|.+|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            5 SSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            345567899999999999999999999999999999999987

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.31  E-value=2.7e-12  Score=64.17  Aligned_cols=41  Identities=24%  Similarity=0.250  Sum_probs=37.8

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceecccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFC   93 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C   93 (134)
                      ...++++|.|.+|++.|.....|..|+++|.+++||.|..|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            6 SGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44567889999999999999999999999999999999987

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.30  E-value=2.5e-12  Score=64.27  Aligned_cols=41  Identities=29%  Similarity=0.352  Sum_probs=37.8

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceecccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFC   93 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C   93 (134)
                      ...++++|.|.+|++.|.....|..|+++|.+++||.|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            6 SGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44567899999999999999999999999999999999987

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=2.5e-12  Score=64.31  Aligned_cols=42  Identities=26%  Similarity=0.372  Sum_probs=38.3

Q ss_pred             CCCCCCCceeccccccccCChHHHHHHHHHcCCCCceecccc
Q psy691           52 TGRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFC   93 (134)
Q Consensus        52 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C   93 (134)
                      ....++++|.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            5 SSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             SCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             cCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            345567889999999999999999999999999999999987

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.30  E-value=7e-13  Score=69.24  Aligned_cols=46  Identities=28%  Similarity=0.383  Sum_probs=42.9

Q ss_pred             ceecccccccccChhhHHHHHhHhcCCCccccccCCCcccCcccee
Q psy691           87 RYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDGKTNVLTTEYLV  132 (134)
Q Consensus        87 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~~~~~~l~  132 (134)
                      ||.|..|++.|.....|..|+++|+++++|.|..|+..|.+...|.
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   46 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLT   46 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHH
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHH
Confidence            6899999999999999999999999999999999999999877663

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=2.4e-12  Score=64.36  Aligned_cols=41  Identities=17%  Similarity=0.242  Sum_probs=37.8

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceecccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFC   93 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C   93 (134)
                      ...++++|.|.+|++.|.....|..|+++|.++++|.|.+|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            6 SGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            44567899999999999999999999999999999999987

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=2.3e-12  Score=64.42  Aligned_cols=42  Identities=21%  Similarity=0.352  Sum_probs=38.2

Q ss_pred             CCCCCCCceeccccccccCChHHHHHHHHHcCCCCceecccc
Q psy691           52 TGRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFC   93 (134)
Q Consensus        52 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C   93 (134)
                      ....++++|.|.+|++.|.....|..|+++|.+++||.|.+|
T Consensus         5 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            5 SSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            344567889999999999999999999999999999999987

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=3.8e-12  Score=63.55  Aligned_cols=41  Identities=27%  Similarity=0.319  Sum_probs=37.8

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceecccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFC   93 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C   93 (134)
                      ...++++|.|.+|++.|.....|..|+++|.+++||.|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            6 SGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             cCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            34567889999999999999999999999999999999987

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.30  E-value=2.6e-12  Score=64.20  Aligned_cols=41  Identities=22%  Similarity=0.293  Sum_probs=37.7

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceecccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFC   93 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C   93 (134)
                      ...++++|.|.+|++.|.....|..|+++|.+++||.|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            6 SGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34567889999999999999999999999999999999987

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.30  E-value=9.2e-13  Score=72.25  Aligned_cols=58  Identities=24%  Similarity=0.449  Sum_probs=49.1

Q ss_pred             HHHHHH-HcCCCCceecc--cccccccChhhHHHHHhHhcCCCccccccCCCcccCcccee
Q psy691           75 LNRHMK-CHSDVKRYLCT--FCGKGFNDTFDLKRHTRTHTGKEEEEEEDGKTNVLTTEYLV  132 (134)
Q Consensus        75 l~~H~~-~h~~~k~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~~~~~~l~  132 (134)
                      +..|+. .|.++++|.|.  .|++.|.....|..|+++|+++++|.|..|++.|.+...|.
T Consensus         6 ~~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   66 (73)
T 1f2i_G            6 MNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLT   66 (73)
T ss_dssp             --CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHH
T ss_pred             ccchhhccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHH
Confidence            333443 47889999997  59999999999999999999999999999999999887663

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=3.8e-12  Score=63.58  Aligned_cols=41  Identities=20%  Similarity=0.347  Sum_probs=37.7

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceecccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFC   93 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C   93 (134)
                      ...++++|.|.+|++.|.....|..|+++|.+++||.|..|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            6 SGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             ccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            34567889999999999999999999999999999999987

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.29  E-value=3.5e-12  Score=63.11  Aligned_cols=40  Identities=25%  Similarity=0.370  Sum_probs=37.2

Q ss_pred             CCCCCceeccccccccCChHHHHHHHHHcCCCCceecccc
Q psy691           54 RKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFC   93 (134)
Q Consensus        54 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C   93 (134)
                      ..++++|.|.+|++.|.....|..|+++|.++++|.|..|
T Consensus         5 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            5 SSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             cCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4567889999999999999999999999999999999987

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=3.3e-12  Score=63.83  Aligned_cols=41  Identities=22%  Similarity=0.410  Sum_probs=37.8

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceecccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFC   93 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C   93 (134)
                      ...++++|.|.+|++.|.....|..|+++|.+++||.|.+|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            6 SGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             ccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            45567889999999999999999999999999999999987

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=2.7e-12  Score=64.15  Aligned_cols=42  Identities=17%  Similarity=0.253  Sum_probs=38.3

Q ss_pred             CCCCCCCceeccccccccCChHHHHHHHHHcCCCCceecccc
Q psy691           52 TGRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFC   93 (134)
Q Consensus        52 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C   93 (134)
                      ....++++|.|.+|++.|.....|..|+++|.+++||.|.+|
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            5 SSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             SCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            345567899999999999999999999999999999999987

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=3.1e-12  Score=63.89  Aligned_cols=41  Identities=22%  Similarity=0.370  Sum_probs=37.8

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceecccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFC   93 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C   93 (134)
                      ...++++|.|++|++.|.....|..|+++|.+++||.|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            6 SGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            34567899999999999999999999999999999999987

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=2.6e-12  Score=64.28  Aligned_cols=42  Identities=14%  Similarity=0.265  Sum_probs=38.2

Q ss_pred             CCCCCCCceeccccccccCChHHHHHHHHHcCCCCceecccc
Q psy691           52 TGRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFC   93 (134)
Q Consensus        52 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C   93 (134)
                      ....++++|.|.+|++.|.....|..|+++|.+++||.|.+|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            5 SSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             CCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             cCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            345567889999999999999999999999999999999987

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=3.8e-12  Score=63.52  Aligned_cols=41  Identities=22%  Similarity=0.262  Sum_probs=37.8

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceecccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFC   93 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C   93 (134)
                      ...++++|.|.+|++.|.....|..|+++|.+++||.|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            6 SGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34567899999999999999999999999999999999987

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=4e-12  Score=63.50  Aligned_cols=41  Identities=24%  Similarity=0.361  Sum_probs=37.7

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceecccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFC   93 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C   93 (134)
                      ...++++|.|.+|++.|.....|..|+++|.+++||.|..|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            6 SGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            34567889999999999999999999999999999999987

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.29  E-value=4.2e-12  Score=63.46  Aligned_cols=41  Identities=22%  Similarity=0.339  Sum_probs=37.7

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceecccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFC   93 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C   93 (134)
                      ...++++|.|++|++.|.....|..|+++|.+++||.|..|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            6 SGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             ccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34567889999999999999999999999999999999987

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=2.8e-12  Score=64.11  Aligned_cols=41  Identities=24%  Similarity=0.361  Sum_probs=37.7

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceecccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFC   93 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C   93 (134)
                      ...++++|.|.+|++.|.....|..|+++|.+++||.|..|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            6 SGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             ccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34567889999999999999999999999999999999987

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=3e-12  Score=63.96  Aligned_cols=41  Identities=27%  Similarity=0.310  Sum_probs=37.7

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceecccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFC   93 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C   93 (134)
                      ...++++|.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            6 SGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44567889999999999999999999999999999999987

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=4.3e-12  Score=63.38  Aligned_cols=41  Identities=24%  Similarity=0.391  Sum_probs=37.8

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceecccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFC   93 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C   93 (134)
                      ...++++|.|++|++.|.....|..|+++|.+++||.|..|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            6 SGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            34567899999999999999999999999999999999987

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=4e-12  Score=63.45  Aligned_cols=41  Identities=22%  Similarity=0.368  Sum_probs=37.7

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceecccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFC   93 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C   93 (134)
                      ...++++|.|.+|++.|.....|..|+++|.+++||.|..|
T Consensus         6 ~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            6 SGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34567889999999999999999999999999999999987

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=5.2e-12  Score=63.07  Aligned_cols=41  Identities=17%  Similarity=0.120  Sum_probs=37.7

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceecccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFC   93 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C   93 (134)
                      ...++++|.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            6 SGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             ccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34567889999999999999999999999999999999987

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=3.6e-12  Score=63.66  Aligned_cols=41  Identities=22%  Similarity=0.323  Sum_probs=37.8

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceecccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFC   93 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C   93 (134)
                      ...++++|.|.+|++.|.....|..|+++|.+++||.|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            6 SGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            34567899999999999999999999999999999999987

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=5.5e-12  Score=62.93  Aligned_cols=41  Identities=24%  Similarity=0.438  Sum_probs=37.6

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceecccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFC   93 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C   93 (134)
                      ...++++|.|++|++.|.....|..|+++|.++++|.|..|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            6 SGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            34567889999999999999999999999999999999987

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=4e-12  Score=63.51  Aligned_cols=41  Identities=22%  Similarity=0.293  Sum_probs=37.8

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceecccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFC   93 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C   93 (134)
                      ...++++|.|.+|++.|.....|..|+++|.+++||.|..|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            6 SGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             ccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34567899999999999999999999999999999999987

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=3.6e-12  Score=63.66  Aligned_cols=41  Identities=17%  Similarity=0.297  Sum_probs=37.8

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceecccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFC   93 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C   93 (134)
                      ...++++|.|++|++.|.....|..|+++|.+++||.|.+|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            6 SGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            44567899999999999999999999999999999999987

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.28  E-value=3.8e-12  Score=63.53  Aligned_cols=41  Identities=27%  Similarity=0.405  Sum_probs=37.7

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceecccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFC   93 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C   93 (134)
                      ...++++|.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            6 SGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             CCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34567889999999999999999999999999999999987

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=4.7e-12  Score=63.22  Aligned_cols=41  Identities=20%  Similarity=0.332  Sum_probs=37.7

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceecccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFC   93 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C   93 (134)
                      ...++++|.|.+|++.|.....|..|+++|.+++||.|..|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            6 SGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             cCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            34567889999999999999999999999999999999987

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1.7e-12  Score=64.89  Aligned_cols=42  Identities=24%  Similarity=0.298  Sum_probs=38.2

Q ss_pred             CCCCCCCceeccccccccCChHHHHHHHHHcCCCCceecccc
Q psy691           52 TGRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFC   93 (134)
Q Consensus        52 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C   93 (134)
                      ....++++|.|.+|++.|.....|..|+++|.+++||.|.+|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            5 SSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            345567889999999999999999999999999999999987

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=5.7e-12  Score=62.87  Aligned_cols=41  Identities=22%  Similarity=0.276  Sum_probs=37.7

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceecccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFC   93 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C   93 (134)
                      ...++++|.|.+|++.|.....|..|+++|.++++|.|..|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            6 SGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34567889999999999999999999999999999999987

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=5.2e-12  Score=63.05  Aligned_cols=41  Identities=29%  Similarity=0.413  Sum_probs=37.6

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceecccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFC   93 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C   93 (134)
                      ...++++|.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            6 SGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34567889999999999999999999999999999999987

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=4.2e-12  Score=63.40  Aligned_cols=41  Identities=24%  Similarity=0.342  Sum_probs=37.7

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceecccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFC   93 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C   93 (134)
                      ...++++|.|.+|++.|.....|..|+++|.+++||.|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            6 SGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34567889999999999999999999999999999999987

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=5.4e-12  Score=63.00  Aligned_cols=41  Identities=22%  Similarity=0.377  Sum_probs=37.7

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceecccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFC   93 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C   93 (134)
                      ...++++|.|++|++.|.....|..|+++|++++||.|..|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            6 SGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34567899999999999999999999999999999999987

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=6.5e-12  Score=62.70  Aligned_cols=41  Identities=22%  Similarity=0.366  Sum_probs=37.5

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceecccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFC   93 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C   93 (134)
                      ...++++|.|.+|++.|.....|..|+++|.+++||.|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            6 SGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             TTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34567889999999999999999999999999999999876

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=99.27  E-value=2.6e-12  Score=61.94  Aligned_cols=37  Identities=22%  Similarity=0.465  Sum_probs=29.3

Q ss_pred             cCCCCceecccccccccChhhHHHHHhHhcCCCcccc
Q psy691           82 HSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEE  118 (134)
Q Consensus        82 h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c  118 (134)
                      |.++++|.|..|++.|.....|..|+++|+++++|.+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            5667888888888888888888888888888888765

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=4.2e-12  Score=63.42  Aligned_cols=41  Identities=22%  Similarity=0.343  Sum_probs=37.7

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceecccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFC   93 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C   93 (134)
                      ...++++|.|.+|++.|.....|..|+++|.+++||.|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            6 SGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            34567899999999999999999999999999999999987

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=5.8e-12  Score=62.86  Aligned_cols=41  Identities=24%  Similarity=0.404  Sum_probs=37.7

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceecccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFC   93 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C   93 (134)
                      ...++++|.|++|++.|.....|..|+++|.++++|.|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            6 SGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             TTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            34567889999999999999999999999999999999987

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.27  E-value=4.8e-12  Score=63.20  Aligned_cols=41  Identities=27%  Similarity=0.397  Sum_probs=37.6

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceecccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFC   93 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C   93 (134)
                      ...++++|.|.+|++.|.....|..|+++|.+++||.|..|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            6 SGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            34567899999999999999999999999999999999987

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.27  E-value=4.3e-12  Score=63.40  Aligned_cols=41  Identities=24%  Similarity=0.431  Sum_probs=37.6

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceecccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFC   93 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C   93 (134)
                      ...++++|.|.+|++.|.....|..|+++|.+++||.|..|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            6 SGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34567889999999999999999999999999999999987

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=4.7e-12  Score=63.25  Aligned_cols=41  Identities=22%  Similarity=0.310  Sum_probs=37.8

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceecccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFC   93 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C   93 (134)
                      ...++++|.|++|++.|.....|..|+++|.++++|.|..|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            6 SGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            44567899999999999999999999999999999999987

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=4.4e-12  Score=63.31  Aligned_cols=41  Identities=24%  Similarity=0.376  Sum_probs=37.8

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceecccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFC   93 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C   93 (134)
                      ...++++|.|.+|++.|.....|..|+++|.+++||.|..|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            6 SGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            44567889999999999999999999999999999999987

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.26  E-value=5.3e-12  Score=63.00  Aligned_cols=41  Identities=24%  Similarity=0.348  Sum_probs=37.7

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceecccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFC   93 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C   93 (134)
                      ...++++|.|.+|++.|.....|..|+++|.+++||.|..|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            6 SGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            34567899999999999999999999999999999999987

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.26  E-value=5.8e-12  Score=62.84  Aligned_cols=41  Identities=20%  Similarity=0.250  Sum_probs=37.7

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceecccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFC   93 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C   93 (134)
                      ...++++|.|++|++.|.....|..|+++|++++||.|..|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            6 SGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             cCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34567889999999999999999999999999999999987

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=5.3e-12  Score=63.01  Aligned_cols=41  Identities=22%  Similarity=0.286  Sum_probs=37.6

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceecccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFC   93 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C   93 (134)
                      ...++++|.|.+|++.|.....|..|+++|.+++||.|..|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            6 SGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             SCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             ccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34567889999999999999999999999999999999987

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.26  E-value=5.9e-12  Score=70.66  Aligned_cols=53  Identities=28%  Similarity=0.453  Sum_probs=49.7

Q ss_pred             CCCceeccc--cccccCChHHHHHHHHHcCCCCceeccc---ccccccChhhHHHHHhHhc
Q psy691           56 DNTRFACHL--CSKSFSLQRLLNRHMKCHSDVKRYLCTF---CGKGFNDTFDLKRHTRTHT  111 (134)
Q Consensus        56 ~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~k~~~C~~---C~~~f~~~~~l~~H~~~h~  111 (134)
                      ++++|.|++  |++.|.....|..|++.|.+   |.|..   |++.|.....|..|+++|+
T Consensus        28 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           28 QQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLYLKHVAECH   85 (85)
T ss_dssp             TTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHHHHHHHHCC
T ss_pred             CCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence            457899998  99999999999999999988   99999   9999999999999999875

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.26  E-value=5e-12  Score=63.13  Aligned_cols=41  Identities=20%  Similarity=0.229  Sum_probs=37.6

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceecccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFC   93 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C   93 (134)
                      ...++++|.|++|++.|.....|..|+++|.+++||.|..|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            6 SGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             ccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            34567889999999999999999999999999999999987

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.26  E-value=2e-12  Score=75.71  Aligned_cols=51  Identities=14%  Similarity=0.062  Sum_probs=45.9

Q ss_pred             cCCCCceecccccccccChhhHHHHHh-Hh---cCCCccccccCCCcccCcccee
Q psy691           82 HSDVKRYLCTFCGKGFNDTFDLKRHTR-TH---TGKEEEEEEDGKTNVLTTEYLV  132 (134)
Q Consensus        82 h~~~k~~~C~~C~~~f~~~~~l~~H~~-~h---~~~~~~~c~~~~~~~~~~~~l~  132 (134)
                      ..+++||.|..|++.|.....|..|++ +|   +++++|.|..|++.|.++..|.
T Consensus        13 ~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~   67 (102)
T 2ghf_A           13 KKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALS   67 (102)
T ss_dssp             CCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHH
T ss_pred             CCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHH
Confidence            467899999999999999999999998 58   6789999999999999887764

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=4.3e-12  Score=63.38  Aligned_cols=41  Identities=22%  Similarity=0.353  Sum_probs=37.8

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceecccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFC   93 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C   93 (134)
                      ...++++|.|.+|++.|.....|..|+++|.+++||.|..|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            6 SGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            34567899999999999999999999999999999999987

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=6.7e-12  Score=62.65  Aligned_cols=41  Identities=22%  Similarity=0.360  Sum_probs=37.7

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceecccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFC   93 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C   93 (134)
                      ...++++|.|.+|++.|.....|..|+++|.+++||.|..|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            6 SGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34567889999999999999999999999999999999987

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=1e-11  Score=62.03  Aligned_cols=41  Identities=22%  Similarity=0.348  Sum_probs=37.3

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceecccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFC   93 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C   93 (134)
                      ...++++|.|.+|++.|.....|..|+++|.+++||.|..|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            6 SGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44567899999999999999999999999999999999865

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=3.8e-12  Score=63.57  Aligned_cols=41  Identities=22%  Similarity=0.342  Sum_probs=37.7

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceecccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFC   93 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C   93 (134)
                      ...++++|.|++|++.|.....|..|+++|.+++||.|.+|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            6 SGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34567889999999999999999999999999999999987

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.24  E-value=2.1e-12  Score=73.37  Aligned_cols=48  Identities=23%  Similarity=0.384  Sum_probs=44.5

Q ss_pred             CCceecccccccccChhhHHHHHhHhcCCCccccccCCCcccCcccee
Q psy691           85 VKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDGKTNVLTTEYLV  132 (134)
Q Consensus        85 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~~~~~~l~  132 (134)
                      ++||.|..|++.|.....|..|+++|+++++|.|..|+..|.+...|.
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~   48 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERK   48 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHH
Confidence            579999999999999999999999999999999999999998877653

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=7.7e-12  Score=62.65  Aligned_cols=41  Identities=22%  Similarity=0.309  Sum_probs=37.7

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHH-HcCCCCceecccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMK-CHSDVKRYLCTFC   93 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~k~~~C~~C   93 (134)
                      ...++++|.|.+|++.|.....|..|++ +|.+++||.|..|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            6 SGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             ccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            4456789999999999999999999999 9999999999987

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=9e-12  Score=62.17  Aligned_cols=41  Identities=22%  Similarity=0.280  Sum_probs=37.3

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceecccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFC   93 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C   93 (134)
                      ...++++|.|.+|++.|.....|..|+++|.+++||.|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            6 SGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34567899999999999999999999999999999999875

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.23  E-value=2.5e-12  Score=61.18  Aligned_cols=36  Identities=25%  Similarity=0.473  Sum_probs=31.1

Q ss_pred             HHcCCCCceecccccccccChhhHHHHHhHhcCCCc
Q psy691           80 KCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEE  115 (134)
Q Consensus        80 ~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  115 (134)
                      ++|.++++|.|..|++.|.....|..|+++|++++|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            467888899999999999999999999999988875

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.23  E-value=5.7e-12  Score=67.81  Aligned_cols=36  Identities=22%  Similarity=0.299  Sum_probs=21.2

Q ss_pred             CCCCceeccc--ccccccChhhHHHHH-hHhcCCCcccc
Q psy691           83 SDVKRYLCTF--CGKGFNDTFDLKRHT-RTHTGKEEEEE  118 (134)
Q Consensus        83 ~~~k~~~C~~--C~~~f~~~~~l~~H~-~~h~~~~~~~c  118 (134)
                      .++|||.|.+  |++.|.+.++|.+|+ ++|+++|||-|
T Consensus        23 sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~   61 (73)
T 1x3c_A           23 SPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFS   61 (73)
T ss_dssp             CSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCC
T ss_pred             cCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccc
Confidence            4556666643  666666666666664 45666666655

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=6.3e-12  Score=67.68  Aligned_cols=48  Identities=19%  Similarity=0.229  Sum_probs=44.0

Q ss_pred             CCCCceecccccccccChhhHHHHHhHhcCCCccccc-cCCCcccCcccee
Q psy691           83 SDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEE-DGKTNVLTTEYLV  132 (134)
Q Consensus        83 ~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~-~~~~~~~~~~~l~  132 (134)
                      -+++||.|..|++.|. ...|..|+++ ++++||.|. .|++.|..+..|.
T Consensus         6 C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~   54 (66)
T 2eod_A            6 SGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLP   54 (66)
T ss_dssp             CCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHH
T ss_pred             CCCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHH
Confidence            4678999999999999 9999999999 999999999 9999998887664

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=2.1e-11  Score=60.82  Aligned_cols=40  Identities=18%  Similarity=0.189  Sum_probs=36.2

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceeccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTF   92 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~   92 (134)
                      ...++++|.|.+|++.|.....|..|+++|++++||.|.+
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            6 SGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            3456788999999999999999999999999999999974

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=1.8e-11  Score=60.77  Aligned_cols=40  Identities=25%  Similarity=0.361  Sum_probs=36.2

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceeccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTF   92 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~   92 (134)
                      ...++++|.|.+|++.|.....|..|+++|.++++|.|.+
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A            6 SGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             CCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred             CCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence            3456788999999999999999999999999999999963

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=2.7e-11  Score=60.39  Aligned_cols=41  Identities=20%  Similarity=0.301  Sum_probs=36.8

Q ss_pred             CCCCCCCceeccccccccCChHHHHHHHHHcCCCCceeccc
Q psy691           52 TGRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTF   92 (134)
Q Consensus        52 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~   92 (134)
                      ....++++|.|.+|++.|.....|..|+++|++++||.|.+
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            5 SSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             cccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            34556789999999999999999999999999999999974

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.18  E-value=1.1e-11  Score=68.80  Aligned_cols=45  Identities=38%  Similarity=0.817  Sum_probs=41.7

Q ss_pred             CCCCCceeccc--cccccCChHHHHHHHHHcCCCCceeccccccccc
Q psy691           54 RKDNTRFACHL--CSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFN   98 (134)
Q Consensus        54 ~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~   98 (134)
                      ..++++|.|.+  |++.|.....|..|+++|+++++|.|.+|++.|.
T Consensus        33 H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A           33 HIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             GGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCCC
T ss_pred             hCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCCC
Confidence            44577899999  9999999999999999999999999999999984

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.18  E-value=3e-11  Score=59.44  Aligned_cols=39  Identities=26%  Similarity=0.272  Sum_probs=35.6

Q ss_pred             CCCCCceeccccccccCChHHHHHHHHHcCCCCceeccc
Q psy691           54 RKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTF   92 (134)
Q Consensus        54 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~   92 (134)
                      ..++++|.|.+|++.|.....|..|+++|++++||.|.+
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            5 SSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             CSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             cCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            455778999999999999999999999999999999964

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=99.18  E-value=5.3e-12  Score=60.01  Aligned_cols=36  Identities=19%  Similarity=0.427  Sum_probs=32.2

Q ss_pred             HHHHcCCCCceecccccccccChhhHHHHHhHhcCC
Q psy691           78 HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGK  113 (134)
Q Consensus        78 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~  113 (134)
                      |+++|.+++||.|..|++.|.....|.+|+++|+++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            667889999999999999999999999999999875

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.17  E-value=1.5e-11  Score=57.56  Aligned_cols=34  Identities=29%  Similarity=0.615  Sum_probs=27.6

Q ss_pred             cCCCCceecccccccccChhhHHHHHhHhcCCCc
Q psy691           82 HSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEE  115 (134)
Q Consensus        82 h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  115 (134)
                      |.++++|.|..|++.|.....|..|+++|++++|
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            6677888888888888888888888888887764

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.17  E-value=3.8e-11  Score=59.85  Aligned_cols=40  Identities=28%  Similarity=0.415  Sum_probs=36.3

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceeccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTF   92 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~   92 (134)
                      ...++++|.|.+|++.|.....|..|+++|.+++||.|.+
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            6 SGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3456789999999999999999999999999999999974

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=3.1e-11  Score=60.14  Aligned_cols=40  Identities=23%  Similarity=0.306  Sum_probs=36.2

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceeccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTF   92 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~   92 (134)
                      ...++++|.|.+|++.|.....|..|+++|.+++||.|.+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            6 SGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3456788999999999999999999999999999999974

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=3.5e-11  Score=59.97  Aligned_cols=40  Identities=23%  Similarity=0.350  Sum_probs=36.3

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceeccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTF   92 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~   92 (134)
                      ...++++|.|.+|++.|.....|..|+++|.+++||.|.+
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            6 SGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            3456788999999999999999999999999999999974

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=99.17  E-value=1.9e-11  Score=57.33  Aligned_cols=34  Identities=24%  Similarity=0.519  Sum_probs=28.5

Q ss_pred             cCCCCceecccccccccChhhHHHHHhHhcCCCc
Q psy691           82 HSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEE  115 (134)
Q Consensus        82 h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  115 (134)
                      |.++++|.|..|++.|.....|.+|+++|++++|
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            6778888888888888888888888888888764

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=4.5e-11  Score=59.53  Aligned_cols=40  Identities=25%  Similarity=0.441  Sum_probs=36.3

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceeccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTF   92 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~   92 (134)
                      ...++++|.|.+|++.|.....|..|+++|.+++||.|..
T Consensus         6 ~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            6 SGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3456788999999999999999999999999999999974

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=3.2e-11  Score=60.57  Aligned_cols=41  Identities=32%  Similarity=0.377  Sum_probs=37.3

Q ss_pred             CCCCCCceecc--ccccccCChHHHHHHHHHcCCCCceecccc
Q psy691           53 GRKDNTRFACH--LCSKSFSLQRLLNRHMKCHSDVKRYLCTFC   93 (134)
Q Consensus        53 ~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C   93 (134)
                      ...++++|.|.  .|++.|.....|..|+++|.+++||.|..|
T Consensus         6 ~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            6 SGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             SSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34567889998  899999999999999999999999999987

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=2.2e-11  Score=60.81  Aligned_cols=41  Identities=20%  Similarity=0.399  Sum_probs=36.8

Q ss_pred             CCCCCCCceeccccccccCChHHHHHHHHHcCCCCceeccc
Q psy691           52 TGRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTF   92 (134)
Q Consensus        52 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~   92 (134)
                      ....++++|.|.+|++.|.....|..|+++|.+++||.|.+
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            5 SSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             SSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            34556789999999999999999999999999999999974

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.16  E-value=1.4e-11  Score=67.30  Aligned_cols=51  Identities=29%  Similarity=0.511  Sum_probs=45.2

Q ss_pred             cCCCCceeccc--ccccccChhhHHHHHhHhcCCCccccc--cCCCcccCcccee
Q psy691           82 HSDVKRYLCTF--CGKGFNDTFDLKRHTRTHTGKEEEEEE--DGKTNVLTTEYLV  132 (134)
Q Consensus        82 h~~~k~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~c~--~~~~~~~~~~~l~  132 (134)
                      +...++|.|..  |++.|.....|.+|+++|+++++|.|.  .|++.|.+...|.
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~   66 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELS   66 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHH
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHH
Confidence            45678999998  999999999999999999999999996  4999998877653

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=3.3e-11  Score=60.08  Aligned_cols=40  Identities=20%  Similarity=0.335  Sum_probs=36.3

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceeccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTF   92 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~   92 (134)
                      ...++++|.|.+|++.|.....|..|+++|.+++||.|..
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            6 SGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             CcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3456789999999999999999999999999999999974

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=4.3e-11  Score=59.64  Aligned_cols=40  Identities=20%  Similarity=0.359  Sum_probs=36.1

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceeccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTF   92 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~   92 (134)
                      ...++++|.|.+|++.|.....|..|+++|+++++|.|..
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoh_A            6 SGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPSS   45 (46)
T ss_dssp             SCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTTC
T ss_pred             CcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3456788999999999999999999999999999999863

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=5e-11  Score=59.33  Aligned_cols=40  Identities=23%  Similarity=0.324  Sum_probs=36.3

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceeccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTF   92 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~   92 (134)
                      ...++++|.|.+|++.|.....|..|+++|.+++||.|.+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            6 SGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             CCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            3456788999999999999999999999999999999974

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=4.6e-11  Score=59.52  Aligned_cols=40  Identities=20%  Similarity=0.332  Sum_probs=36.2

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceeccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTF   92 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~   92 (134)
                      ...++++|.|.+|++.|.....|..|+++|.++++|.|..
T Consensus         6 ~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            6 SGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             SCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             ccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            4456788999999999999999999999999999999964

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=4.6e-11  Score=59.48  Aligned_cols=40  Identities=23%  Similarity=0.333  Sum_probs=36.2

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceeccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTF   92 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~   92 (134)
                      ...++++|.|.+|++.|.....|..|+++|.+++||.|.+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            6 SGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             SSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3456788999999999999999999999999999999974

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=3.7e-11  Score=59.83  Aligned_cols=40  Identities=20%  Similarity=0.345  Sum_probs=36.3

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceeccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTF   92 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~   92 (134)
                      ...++++|.|.+|++.|.....|..|+++|.+++||.|.+
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            6 SGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            3456788999999999999999999999999999999974

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=4.2e-11  Score=59.66  Aligned_cols=40  Identities=23%  Similarity=0.333  Sum_probs=36.3

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceeccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTF   92 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~   92 (134)
                      ...++++|.|.+|++.|.....|..|+++|.+++||.|.+
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            6 SGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            3456788999999999999999999999999999999974

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.15  E-value=4.8e-11  Score=58.24  Aligned_cols=38  Identities=18%  Similarity=0.370  Sum_probs=34.9

Q ss_pred             CCCCCceeccccccccCChHHHHHHHHHcCCCCceecc
Q psy691           54 RKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCT   91 (134)
Q Consensus        54 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~   91 (134)
                      ..++++|.|.+|++.|.....|..|+++|.++++|.|.
T Consensus         5 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            5 SSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             SSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            45678899999999999999999999999999999984

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=3.8e-11  Score=59.84  Aligned_cols=40  Identities=25%  Similarity=0.431  Sum_probs=36.1

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceeccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTF   92 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~   92 (134)
                      ...++++|.|.+|++.|.....|..|+++|.+++||.|..
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enh_A            6 SGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred             CcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4456788999999999999999999999999999999863

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.14  E-value=2.2e-12  Score=73.56  Aligned_cols=56  Identities=16%  Similarity=0.283  Sum_probs=43.9

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceecccccccccChhhHHHHHhHhcC
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG  112 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~  112 (134)
                      ...++++|.|.+|++.|.....|..|+++|++++||.|..|    .....|..|+++|.+
T Consensus        19 ~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~----~~~~~~~~~~~~~~~   74 (88)
T 1x6f_A           19 PRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQ----ERRKQLLSKQKYADG   74 (88)
T ss_dssp             SCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCC----SCCCCCCCCCCCCCC
T ss_pred             ccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchh----hhHHHHHhhhccccc
Confidence            34556788899999999888889889888888888888764    455666677788777

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=4.3e-11  Score=58.14  Aligned_cols=37  Identities=22%  Similarity=0.370  Sum_probs=34.2

Q ss_pred             CCCCCceeccccccccCChHHHHHHHHHcCCCCceec
Q psy691           54 RKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLC   90 (134)
Q Consensus        54 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C   90 (134)
                      ..++++|.|.+|++.|.....|..|+++|++++||.|
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            5 SSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             CCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             cCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            4557889999999999999999999999999999987

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=8.1e-11  Score=57.95  Aligned_cols=39  Identities=18%  Similarity=0.353  Sum_probs=35.5

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceecc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCT   91 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~   91 (134)
                      ...++++|.|.+|++.|.....|..|+++|.+++||.|.
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            6 SGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            345678899999999999999999999999999999984

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=5.8e-11  Score=59.09  Aligned_cols=40  Identities=20%  Similarity=0.309  Sum_probs=36.2

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceeccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTF   92 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~   92 (134)
                      ...++++|.|.+|++.|.....|..|+++|.+++||.|..
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            6 SGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             CCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3456788999999999999999999999999999999974

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=7.1e-11  Score=57.58  Aligned_cols=38  Identities=21%  Similarity=0.343  Sum_probs=34.8

Q ss_pred             CCCCCceeccccccccCChHHHHHHHHHcCCCCceecc
Q psy691           54 RKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCT   91 (134)
Q Consensus        54 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~   91 (134)
                      ..++++|.|.+|++.|.....|..|+++|.++++|.|.
T Consensus         5 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            5 SSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             SCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             cCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            45678899999999999999999999999999999984

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.13  E-value=7.5e-11  Score=57.48  Aligned_cols=38  Identities=24%  Similarity=0.344  Sum_probs=34.7

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceec
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLC   90 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C   90 (134)
                      ...++++|.|.+|++.|.....|..|+++|.+++||.|
T Consensus         5 ~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            5 SSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             cCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            34567889999999999999999999999999999987

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=4.5e-11  Score=59.54  Aligned_cols=40  Identities=23%  Similarity=0.349  Sum_probs=36.2

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceeccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTF   92 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~   92 (134)
                      ...++++|.|.+|++.|.....|..|+++|.+++||.|.+
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            6 SGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            3456788999999999999999999999999999999974

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=5.5e-11  Score=59.19  Aligned_cols=40  Identities=28%  Similarity=0.417  Sum_probs=36.2

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceeccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTF   92 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~   92 (134)
                      ...++++|.|.+|++.|.....|..|+++|.+++||.|..
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            6 SGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            3456788999999999999999999999999999999974

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=99.13  E-value=3e-11  Score=56.03  Aligned_cols=32  Identities=28%  Similarity=0.450  Sum_probs=22.1

Q ss_pred             CceecccccccccChhhHHHHHhHhcCCCccc
Q psy691           86 KRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEE  117 (134)
Q Consensus        86 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  117 (134)
                      +||.|..|++.|.....|..|+++|+++++|.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            45677777777777777777777777776664

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.13  E-value=6.3e-11  Score=58.47  Aligned_cols=39  Identities=23%  Similarity=0.292  Sum_probs=35.2

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceecc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCT   91 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~   91 (134)
                      ...++++|.|.+|++.|.....|..|+++|.+++||.|.
T Consensus         6 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            6 SGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             SCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            345577899999999999999999999999999999984

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=5.7e-11  Score=59.19  Aligned_cols=40  Identities=23%  Similarity=0.383  Sum_probs=36.2

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceeccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTF   92 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~   92 (134)
                      ...++++|.|.+|++.|.....|..|+++|++++||.|..
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            6 SGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             ccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            3456788999999999999999999999999999999974

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=6.2e-11  Score=58.99  Aligned_cols=40  Identities=20%  Similarity=0.351  Sum_probs=36.1

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceeccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTF   92 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~   92 (134)
                      ...++++|.|.+|++.|.....|..|+++|.+++||.|..
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            6 SGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            3456788999999999999999999999999999999974

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=7.4e-11  Score=58.76  Aligned_cols=40  Identities=23%  Similarity=0.491  Sum_probs=36.2

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceeccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTF   92 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~   92 (134)
                      ...++++|.|.+|++.|.....|..|+++|+++++|.|..
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            6 SGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             CCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             cCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3456788999999999999999999999999999999963

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=5.6e-11  Score=58.59  Aligned_cols=39  Identities=26%  Similarity=0.363  Sum_probs=35.5

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceecc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCT   91 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~   91 (134)
                      ...++++|.|.+|++.|.....|..|+++|.++++|.|+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            6 SGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             SSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             ccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            445678999999999999999999999999999999984

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=8.5e-11  Score=58.54  Aligned_cols=39  Identities=18%  Similarity=0.357  Sum_probs=35.7

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceecc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCT   91 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~   91 (134)
                      ...++++|.|.+|++.|.....|..|+++|.++++|.|.
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            6 SGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             ccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            345678899999999999999999999999999999986

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=5.8e-11  Score=59.14  Aligned_cols=40  Identities=25%  Similarity=0.409  Sum_probs=36.2

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceeccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTF   92 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~   92 (134)
                      ...++++|.|.+|++.|.....|..|+++|.+++||.|..
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            6 SGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             SSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             ccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            3456788999999999999999999999999999999974

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=6e-11  Score=59.07  Aligned_cols=40  Identities=20%  Similarity=0.317  Sum_probs=36.1

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceeccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTF   92 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~   92 (134)
                      ...++++|.|.+|++.|.....|..|+++|.+++||.|..
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            6 SGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             ccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3456788999999999999999999999999999999974

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=6.8e-11  Score=58.92  Aligned_cols=40  Identities=23%  Similarity=0.385  Sum_probs=36.1

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceeccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTF   92 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~   92 (134)
                      ...++++|.|.+|++.|.....|..|+++|.+++||.|..
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            6 SGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             CCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            3456788999999999999999999999999999999974

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.11  E-value=5.2e-11  Score=57.16  Aligned_cols=32  Identities=25%  Similarity=0.391  Sum_probs=24.1

Q ss_pred             cCCCCceeccc--ccccccChhhHHHHHhHhcCC
Q psy691           82 HSDVKRYLCTF--CGKGFNDTFDLKRHTRTHTGK  113 (134)
Q Consensus        82 h~~~k~~~C~~--C~~~f~~~~~l~~H~~~h~~~  113 (134)
                      +.+++||.|.+  |++.|...+.|.+|+++|+++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            56677777775  777777777777777777775

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=6.9e-11  Score=58.22  Aligned_cols=39  Identities=18%  Similarity=0.334  Sum_probs=35.4

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceecc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCT   91 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~   91 (134)
                      ...++++|.|.+|++.|.....|..|+++|.+++||.|.
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            6 SGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            345678899999999999999999999999999999984

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.11  E-value=5e-12  Score=72.07  Aligned_cols=44  Identities=16%  Similarity=0.311  Sum_probs=40.2

Q ss_pred             HHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccCC
Q psy691           79 MKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDGK  122 (134)
Q Consensus        79 ~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~  122 (134)
                      .++|.++++|.|..|++.|.....|..|+++|++++||+|..+.
T Consensus        17 ~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~   60 (88)
T 1x6f_A           17 NGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQE   60 (88)
T ss_dssp             CCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCS
T ss_pred             ccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhh
Confidence            45689999999999999999999999999999999999996544

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.10  E-value=2.1e-11  Score=64.86  Aligned_cols=49  Identities=18%  Similarity=0.419  Sum_probs=42.5

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceecccccccccChhhHH
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLK  104 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~  104 (134)
                      ...++++|.|++|++.|.....|.   +.|.+++||.|..|++.|....++.
T Consensus         8 ~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~   56 (62)
T 1vd4_A            8 DSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAM   56 (62)
T ss_dssp             SCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTCS
T ss_pred             HcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCcccc
Confidence            455678999999999999888776   7899999999999999999877654

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=5.4e-11  Score=59.28  Aligned_cols=40  Identities=25%  Similarity=0.393  Sum_probs=36.3

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceeccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTF   92 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~   92 (134)
                      ...++++|.|.+|++.|.....|..|+++|.++++|.|..
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emz_A            6 SGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPSS   45 (46)
T ss_dssp             CSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4456789999999999999999999999999999999973

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=8.4e-11  Score=57.98  Aligned_cols=39  Identities=23%  Similarity=0.469  Sum_probs=35.4

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceecc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCT   91 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~   91 (134)
                      ...++++|.|.+|++.|.....|..|+++|.+++||.|.
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            6 SGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             ccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            345678899999999999999999999999999999984

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.10  E-value=5.6e-11  Score=56.73  Aligned_cols=35  Identities=34%  Similarity=0.500  Sum_probs=29.6

Q ss_pred             cCCCCceecc--cccccccChhhHHHHHhHhcCCCcc
Q psy691           82 HSDVKRYLCT--FCGKGFNDTFDLKRHTRTHTGKEEE  116 (134)
Q Consensus        82 h~~~k~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~  116 (134)
                      |+++++|.|.  .|++.|.....|.+|+++|+++++|
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            5678888888  4888888888888888888888876

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=1.3e-10  Score=57.23  Aligned_cols=39  Identities=18%  Similarity=0.388  Sum_probs=35.4

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceecc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCT   91 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~   91 (134)
                      ...++++|.|.+|++.|.....|..|+++|.++++|.|.
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            6 SGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             ccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            345678999999999999999999999999999999984

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.09  E-value=8.9e-11  Score=58.47  Aligned_cols=40  Identities=28%  Similarity=0.498  Sum_probs=35.9

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCC-CCceeccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSD-VKRYLCTF   92 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~k~~~C~~   92 (134)
                      ...++++|.|.+|++.|.....|..|+++|.+ ++||.|..
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            6 SGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred             ccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34567889999999999999999999999999 99999963

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=6.9e-11  Score=57.67  Aligned_cols=38  Identities=16%  Similarity=0.291  Sum_probs=34.7

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceec
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLC   90 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C   90 (134)
                      ...++++|.|.+|++.|.....|..|+++|.+++||.|
T Consensus         5 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            5 SSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             ccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            34567889999999999999999999999999999987

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=7.2e-11  Score=57.63  Aligned_cols=38  Identities=16%  Similarity=0.425  Sum_probs=34.6

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceec
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLC   90 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C   90 (134)
                      ...++++|.|.+|++.|.....|..|+++|.+++||.|
T Consensus         5 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            5 SSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             ccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            34567889999999999999999999999999999987

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.3e-10  Score=57.84  Aligned_cols=40  Identities=23%  Similarity=0.398  Sum_probs=36.0

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceeccc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTF   92 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~   92 (134)
                      ...++++|.|.+|++.|.....|..|+++|.+++||.|..
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            6 SGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             SSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             CCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3456788999999999999999999999999999999863

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=8e-11  Score=57.40  Aligned_cols=38  Identities=21%  Similarity=0.399  Sum_probs=34.7

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceec
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLC   90 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C   90 (134)
                      ...++++|.|.+|++.|.....|..|+++|++++||.|
T Consensus         5 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            5 SSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             ccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            34567889999999999999999999999999999987

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=5.6e-11  Score=56.37  Aligned_cols=34  Identities=29%  Similarity=0.522  Sum_probs=28.9

Q ss_pred             HcCCCCceecccccccccCh-hhHHHHHhHhcCCC
Q psy691           81 CHSDVKRYLCTFCGKGFNDT-FDLKRHTRTHTGKE  114 (134)
Q Consensus        81 ~h~~~k~~~C~~C~~~f~~~-~~l~~H~~~h~~~~  114 (134)
                      +|.++++|.|..|++.|... ..|.+|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            57788889999999999888 88999988888764

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=9.9e-11  Score=57.71  Aligned_cols=39  Identities=26%  Similarity=0.428  Sum_probs=35.3

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceecc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCT   91 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~   91 (134)
                      ...++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         6 ~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            6 SGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            345678899999999999999999999999999999984

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=9.4e-11  Score=55.14  Aligned_cols=34  Identities=32%  Similarity=0.474  Sum_probs=26.4

Q ss_pred             HcCCCCceecccccccccChhhHHHHHhHhcCCC
Q psy691           81 CHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKE  114 (134)
Q Consensus        81 ~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~  114 (134)
                      +|.++++|.|..|++.|.....|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            3677778888888888888888888888887764

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=6.3e-11  Score=55.84  Aligned_cols=34  Identities=29%  Similarity=0.479  Sum_probs=26.9

Q ss_pred             HcCCCCceecccccccccChhhHHHHHhHhcCCC
Q psy691           81 CHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKE  114 (134)
Q Consensus        81 ~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~  114 (134)
                      .|.++++|.|..|++.|.....|.+|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            4667788888888888888888888888887764

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=8.6e-11  Score=55.37  Aligned_cols=34  Identities=24%  Similarity=0.457  Sum_probs=25.4

Q ss_pred             HcCCCCceecccccccccChhhHHHHHhHhcCCC
Q psy691           81 CHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKE  114 (134)
Q Consensus        81 ~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~  114 (134)
                      .|.++++|.|..|++.|.....|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhccCC
Confidence            4667777777777777777777777777777654

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=2.9e-10  Score=56.06  Aligned_cols=38  Identities=24%  Similarity=0.446  Sum_probs=34.8

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceec
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLC   90 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C   90 (134)
                      ...++++|.|.+|++.|.....|..|+++|++++||.|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            6 SGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             ccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            44567899999999999999999999999999999986

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=1e-10  Score=64.64  Aligned_cols=59  Identities=22%  Similarity=0.298  Sum_probs=52.0

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceecccccccccChhhHHHHHhHhcCCC
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKE  114 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~  114 (134)
                      ..-+.+++.|.+|++.|. ...|..|+ .|.+++++.|..|++.|. ...|..|+++|.+++
T Consensus        11 ~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~~   69 (75)
T 2d9k_A           11 TECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGREG   69 (75)
T ss_dssp             CCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTBS
T ss_pred             ccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccCCc
Confidence            456678999999999995 88999999 899999999999999887 489999999998864

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.2e-10  Score=57.97  Aligned_cols=39  Identities=21%  Similarity=0.381  Sum_probs=35.5

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCCCceecc
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCT   91 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~   91 (134)
                      ...++++|.|.+|++.|.....|..|+++|.+++||.|.
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            6 SGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            345678999999999999999999999999999999986

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.02  E-value=1.3e-09  Score=58.70  Aligned_cols=42  Identities=19%  Similarity=0.259  Sum_probs=36.8

Q ss_pred             cCCCCCCCceeccc--cccccCChHHHHHHH-HHcCCCCceeccc
Q psy691           51 TTGRKDNTRFACHL--CSKSFSLQRLLNRHM-KCHSDVKRYLCTF   92 (134)
Q Consensus        51 ~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~k~~~C~~   92 (134)
                      .....+++||.|.+  |++.|.+..+|..|+ ++|+++|||.|..
T Consensus        19 ~~~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           19 PTRYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SSSSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             cccccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            44567789999976  999999999999998 6899999999875

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=2.2e-10  Score=53.83  Aligned_cols=33  Identities=39%  Similarity=0.582  Sum_probs=25.1

Q ss_pred             cCCCCceecccccccccChhhHHHHHhHhcCCC
Q psy691           82 HSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKE  114 (134)
Q Consensus        82 h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~  114 (134)
                      |.++++|.|..|++.|.....|.+|+++|++++
T Consensus         4 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            4 GSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            666777788788888877777877877777764

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.01  E-value=7.3e-11  Score=56.08  Aligned_cols=34  Identities=26%  Similarity=0.355  Sum_probs=28.6

Q ss_pred             HHcCCCCceecccccccccChhhHHHH-HhHhcCC
Q psy691           80 KCHSDVKRYLCTFCGKGFNDTFDLKRH-TRTHTGK  113 (134)
Q Consensus        80 ~~h~~~k~~~C~~C~~~f~~~~~l~~H-~~~h~~~  113 (134)
                      ++|.+++||.|..|++.|.....|..| +++|+++
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            457888889999999999998999989 8888764

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.01  E-value=2.2e-10  Score=53.87  Aligned_cols=33  Identities=33%  Similarity=0.603  Sum_probs=23.7

Q ss_pred             cCCCCceecccccccccChhhHHHHHhHhcCCC
Q psy691           82 HSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKE  114 (134)
Q Consensus        82 h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~  114 (134)
                      |.++++|.|..|++.|.....|..|+++|++++
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            556677777777777777777777777777653

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=99.00  E-value=1.7e-10  Score=58.11  Aligned_cols=35  Identities=31%  Similarity=0.596  Sum_probs=27.2

Q ss_pred             HcCCCCceecccccccccChhhHHHHHh-HhcCCCc
Q psy691           81 CHSDVKRYLCTFCGKGFNDTFDLKRHTR-THTGKEE  115 (134)
Q Consensus        81 ~h~~~k~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~  115 (134)
                      +|++++||.|.+|++.|.....|.+|++ +|+++..
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            4778888999999999999899999988 8888654

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.99  E-value=3.3e-10  Score=54.32  Aligned_cols=35  Identities=23%  Similarity=0.529  Sum_probs=32.4

Q ss_pred             CCCceeccccccccCChHHHHHHHHHcCCCCceec
Q psy691           56 DNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLC   90 (134)
Q Consensus        56 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C   90 (134)
                      ++++|.|.+|++.|.....|..|+++|++++||.+
T Consensus         3 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            3 PPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             CSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            46789999999999999999999999999999875

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.98  E-value=3.7e-10  Score=52.24  Aligned_cols=32  Identities=28%  Similarity=0.492  Sum_probs=30.0

Q ss_pred             CceeccccccccCChHHHHHHHHHcCCCCcee
Q psy691           58 TRFACHLCSKSFSLQRLLNRHMKCHSDVKRYL   89 (134)
Q Consensus        58 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~   89 (134)
                      ++|.|.+|++.|.....|..|+++|+++++|.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            47999999999999999999999999999885

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.96  E-value=4.3e-10  Score=53.32  Aligned_cols=33  Identities=36%  Similarity=0.691  Sum_probs=26.3

Q ss_pred             cCCCCceeccc--ccccccChhhHHHHHhHhcCCC
Q psy691           82 HSDVKRYLCTF--CGKGFNDTFDLKRHTRTHTGKE  114 (134)
Q Consensus        82 h~~~k~~~C~~--C~~~f~~~~~l~~H~~~h~~~~  114 (134)
                      |.++++|.|.+  |++.|...+.|.+|+++|++++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            66778888874  8888888888888888888764

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=1.6e-11  Score=67.92  Aligned_cols=53  Identities=21%  Similarity=0.311  Sum_probs=47.1

Q ss_pred             HHHHHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccCCCcccCc
Q psy691           74 LLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDGKTNVLTT  128 (134)
Q Consensus        74 ~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~~~~  128 (134)
                      .|..|++.|.+.+++.|.+|++.|. ...|..|+ .|.+++++.|..|+..|.++
T Consensus         4 ~L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~~~   56 (75)
T 2d9k_A            4 GSSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVLVK   56 (75)
T ss_dssp             CCSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEETT
T ss_pred             HHHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCcHH
Confidence            4667888899999999999999995 89999999 99999999999888887754

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=4.1e-12  Score=69.37  Aligned_cols=54  Identities=19%  Similarity=0.205  Sum_probs=47.6

Q ss_pred             hHHHHHHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccCCCcccCcccee
Q psy691           72 QRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDGKTNVLTTEYLV  132 (134)
Q Consensus        72 ~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~~~~~~l~  132 (134)
                      ...|..|++.|.++++|.|..|++.|.....|..       +++|.|..|+..|.+...|.
T Consensus         3 ~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~   56 (73)
T 2ctu_A            3 SGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALN   56 (73)
T ss_dssp             CCSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSC
T ss_pred             chhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHH
Confidence            3457789999999999999999999999998876       89999999999998887764

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.92  E-value=3.2e-11  Score=55.52  Aligned_cols=31  Identities=23%  Similarity=0.295  Sum_probs=24.6

Q ss_pred             CceecccccccccChhhHHHHHhHhcCCCcc
Q psy691           86 KRYLCTFCGKGFNDTFDLKRHTRTHTGKEEE  116 (134)
Q Consensus        86 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  116 (134)
                      +||.|..|++.|.....|.+|+++|++++||
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            4678888888888888888888888887776

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.89  E-value=2.6e-10  Score=57.10  Aligned_cols=37  Identities=22%  Similarity=0.435  Sum_probs=32.1

Q ss_pred             HHHHcCCCCceecc--cccccccChhhHHHHHhHhcCCC
Q psy691           78 HMKCHSDVKRYLCT--FCGKGFNDTFDLKRHTRTHTGKE  114 (134)
Q Consensus        78 H~~~h~~~k~~~C~--~C~~~f~~~~~l~~H~~~h~~~~  114 (134)
                      |+..|.+++||.|.  .|++.|...+.|.+|+++|++++
T Consensus         9 ~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            9 KYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            44568899999996  69999999999999999999875

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.88  E-value=6.5e-10  Score=52.57  Aligned_cols=26  Identities=27%  Similarity=0.591  Sum_probs=17.7

Q ss_pred             cCCCCceecccccccccChhhHHHHH
Q psy691           82 HSDVKRYLCTFCGKGFNDTFDLKRHT  107 (134)
Q Consensus        82 h~~~k~~~C~~C~~~f~~~~~l~~H~  107 (134)
                      +.+++||.|..|++.|.+.++|.+|+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC
Confidence            34566777777777777777777766

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.86  E-value=3.7e-09  Score=49.10  Aligned_cols=33  Identities=21%  Similarity=0.456  Sum_probs=29.8

Q ss_pred             CCCCceeccccccccCChHHHHHHHHHcCCCCc
Q psy691           55 KDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKR   87 (134)
Q Consensus        55 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~   87 (134)
                      .++++|.|.+|++.|.....|..|++.|++++|
T Consensus         3 ~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            3 SGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            356789999999999999999999999998864

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.85  E-value=1.6e-09  Score=48.14  Aligned_cols=29  Identities=28%  Similarity=0.469  Sum_probs=20.4

Q ss_pred             CceecccccccccChhhHHHHHhHhcCCC
Q psy691           86 KRYLCTFCGKGFNDTFDLKRHTRTHTGKE  114 (134)
Q Consensus        86 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~  114 (134)
                      +||.|..|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCCC
Confidence            46777777777777777777777776653

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.84  E-value=3.8e-09  Score=49.13  Aligned_cols=33  Identities=27%  Similarity=0.631  Sum_probs=29.9

Q ss_pred             CCCCceeccccccccCChHHHHHHHHHcCCCCc
Q psy691           55 KDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKR   87 (134)
Q Consensus        55 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~   87 (134)
                      .++++|.|.+|++.|.....|..|++.|++++|
T Consensus         3 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            3 SGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             SCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            456789999999999999999999999998864

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=3.4e-09  Score=49.94  Aligned_cols=34  Identities=29%  Similarity=0.610  Sum_probs=30.5

Q ss_pred             CCCCCceeccccccccCChHHHHHHHHHcCCCCc
Q psy691           54 RKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKR   87 (134)
Q Consensus        54 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~   87 (134)
                      ..++++|.|.+|++.|.....|..|+++|++++|
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            4 GSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            3456789999999999999999999999998875

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.83  E-value=2e-09  Score=57.81  Aligned_cols=32  Identities=25%  Similarity=0.447  Sum_probs=18.7

Q ss_pred             CCCCCceeccccccccCChHHHHHHHHHcCCC
Q psy691           54 RKDNTRFACHLCSKSFSLQRLLNRHMKCHSDV   85 (134)
Q Consensus        54 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   85 (134)
                      ..++++|.|.+|++.|.....|..|+++|+++
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~   39 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEAQHGVT   39 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTT
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhhhhCCC
Confidence            34455566666666666666666666666554

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.83  E-value=2e-09  Score=48.06  Aligned_cols=28  Identities=39%  Similarity=0.851  Sum_probs=17.3

Q ss_pred             CceecccccccccChhhHHHHHhHhcCC
Q psy691           86 KRYLCTFCGKGFNDTFDLKRHTRTHTGK  113 (134)
Q Consensus        86 k~~~C~~C~~~f~~~~~l~~H~~~h~~~  113 (134)
                      +||.|..|++.|.....|..|+++|+++
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            4566666666666666666666666554

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.83  E-value=4.9e-09  Score=50.11  Aligned_cols=33  Identities=21%  Similarity=0.378  Sum_probs=29.3

Q ss_pred             CCCCCCceeccc--cccccCChHHHHHHHHHcCCC
Q psy691           53 GRKDNTRFACHL--CSKSFSLQRLLNRHMKCHSDV   85 (134)
Q Consensus        53 ~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~   85 (134)
                      ...+++||.|.+  |++.|..+..|.+|+++|+++
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            345678999986  999999999999999999876

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.82  E-value=2.6e-09  Score=47.38  Aligned_cols=27  Identities=37%  Similarity=0.827  Sum_probs=16.8

Q ss_pred             ceecccccccccChhhHHHHHhHhcCC
Q psy691           87 RYLCTFCGKGFNDTFDLKRHTRTHTGK  113 (134)
Q Consensus        87 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  113 (134)
                      ||.|..|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            566666666666666666666666554

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.79  E-value=3.6e-09  Score=48.18  Aligned_cols=29  Identities=38%  Similarity=0.736  Sum_probs=20.5

Q ss_pred             Cceecc--cccccccChhhHHHHHhHhcCCC
Q psy691           86 KRYLCT--FCGKGFNDTFDLKRHTRTHTGKE  114 (134)
Q Consensus        86 k~~~C~--~C~~~f~~~~~l~~H~~~h~~~~  114 (134)
                      +||.|.  .|++.|.....|..|+++|++++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            567777  67777777777777777777653

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.79  E-value=3e-09  Score=47.13  Aligned_cols=29  Identities=41%  Similarity=0.768  Sum_probs=18.4

Q ss_pred             CceecccccccccChhhHHHHHhHhcCCC
Q psy691           86 KRYLCTFCGKGFNDTFDLKRHTRTHTGKE  114 (134)
Q Consensus        86 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~  114 (134)
                      +||.|..|++.|.....|..|+++|++++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            35666666666666666666666666553

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.79  E-value=3.4e-09  Score=47.28  Aligned_cols=29  Identities=38%  Similarity=0.688  Sum_probs=19.6

Q ss_pred             CceecccccccccChhhHHHHHhHhcCCC
Q psy691           86 KRYLCTFCGKGFNDTFDLKRHTRTHTGKE  114 (134)
Q Consensus        86 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~  114 (134)
                      ++|.|..|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            35667777777777777777777766654

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.78  E-value=5.4e-09  Score=53.70  Aligned_cols=36  Identities=19%  Similarity=0.336  Sum_probs=32.5

Q ss_pred             CCCCCceeccccccccCChHHHHHHHHHcCCCCcee
Q psy691           54 RKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYL   89 (134)
Q Consensus        54 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~   89 (134)
                      ..++++|.|.+|++.|.....|..|+++|++++||.
T Consensus        19 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A           19 SQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             HTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             cCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            355788999999999999999999999999999873

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.77  E-value=3.3e-09  Score=46.92  Aligned_cols=29  Identities=34%  Similarity=0.600  Sum_probs=20.8

Q ss_pred             CceecccccccccChhhHHHHHhHhcCCC
Q psy691           86 KRYLCTFCGKGFNDTFDLKRHTRTHTGKE  114 (134)
Q Consensus        86 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~  114 (134)
                      +||.|..|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            46777777777777777777777777653

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.77  E-value=3.6e-09  Score=47.85  Aligned_cols=29  Identities=48%  Similarity=1.114  Sum_probs=19.2

Q ss_pred             Cceecc--cccccccChhhHHHHHhHhcCCC
Q psy691           86 KRYLCT--FCGKGFNDTFDLKRHTRTHTGKE  114 (134)
Q Consensus        86 k~~~C~--~C~~~f~~~~~l~~H~~~h~~~~  114 (134)
                      +||.|.  .|++.|.....|..|+++|++++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            356665  67777777777777777766653

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=1.2e-08  Score=47.62  Aligned_cols=33  Identities=24%  Similarity=0.484  Sum_probs=29.3

Q ss_pred             CCCCCceeccccccccCChHHHHHHHHHcCCCC
Q psy691           54 RKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVK   86 (134)
Q Consensus        54 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   86 (134)
                      ..++++|.|.+|++.|.....|..|+++|++++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            4 GSSGKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            445678999999999999999999999998764

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=1.3e-08  Score=47.61  Aligned_cols=33  Identities=30%  Similarity=0.488  Sum_probs=29.3

Q ss_pred             CCCCCceeccccccccCChHHHHHHHHHcCCCC
Q psy691           54 RKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVK   86 (134)
Q Consensus        54 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   86 (134)
                      ..++++|.|.+|++.|.....|..|+++|++++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            4 GSSGKPFKCSLCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             SCCCCSEECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCCCccCCCCCchhCCHHHHHHHHHHhccCC
Confidence            355678999999999999999999999998764

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=98.22  E-value=9.8e-10  Score=48.95  Aligned_cols=29  Identities=41%  Similarity=0.819  Sum_probs=19.9

Q ss_pred             CceecccccccccChhhHHHHHhHhcCCC
Q psy691           86 KRYLCTFCGKGFNDTFDLKRHTRTHTGKE  114 (134)
Q Consensus        86 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~  114 (134)
                      +||.|..|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            35677777777777777777777776653

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=1.4e-08  Score=47.43  Aligned_cols=32  Identities=28%  Similarity=0.702  Sum_probs=28.7

Q ss_pred             CCCCceeccccccccCChHHHHHHHHHcCCCC
Q psy691           55 KDNTRFACHLCSKSFSLQRLLNRHMKCHSDVK   86 (134)
Q Consensus        55 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   86 (134)
                      ..+++|.|.+|++.|.....|..|+++|.+++
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            5 SSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             SCCCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            45678999999999999999999999998764

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.73  E-value=1.1e-08  Score=47.89  Aligned_cols=33  Identities=27%  Similarity=0.551  Sum_probs=29.1

Q ss_pred             CCCCCceeccccccccCChHHHHHHHHHcCCCC
Q psy691           54 RKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVK   86 (134)
Q Consensus        54 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   86 (134)
                      ..++++|.|.+|++.|.....|..|+++|++++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            4 GSSGLLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             SCCCCCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            345678999999999999999999999998764

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.73  E-value=1.5e-08  Score=47.27  Aligned_cols=33  Identities=21%  Similarity=0.420  Sum_probs=29.2

Q ss_pred             CCCCCceeccccccccCChHHHHHHHHHcCCCC
Q psy691           54 RKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVK   86 (134)
Q Consensus        54 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   86 (134)
                      ...+++|.|.+|++.|.....|..|+++|++++
T Consensus         4 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            4 GSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            345678999999999999999999999998764

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=98.19  E-value=1.3e-09  Score=48.83  Aligned_cols=29  Identities=45%  Similarity=0.904  Sum_probs=20.3

Q ss_pred             CceecccccccccChhhHHHHHhHhcCCC
Q psy691           86 KRYLCTFCGKGFNDTFDLKRHTRTHTGKE  114 (134)
Q Consensus        86 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~  114 (134)
                      +||.|..|++.|.....|..|+++|++++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   30 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTGEK   30 (30)
Confidence            56777777777777777777777776653

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.71  E-value=6.3e-09  Score=45.78  Aligned_cols=26  Identities=38%  Similarity=0.856  Sum_probs=15.5

Q ss_pred             CceecccccccccChhhHHHHHhHhc
Q psy691           86 KRYLCTFCGKGFNDTFDLKRHTRTHT  111 (134)
Q Consensus        86 k~~~C~~C~~~f~~~~~l~~H~~~h~  111 (134)
                      ++|.|..|++.|.....|..|+++|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhcC
Confidence            45666666666666666666665554

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.71  E-value=1e-08  Score=48.56  Aligned_cols=33  Identities=24%  Similarity=0.505  Sum_probs=30.2

Q ss_pred             CCCceecc--ccccccCChHHHHHHHHHcCCCCce
Q psy691           56 DNTRFACH--LCSKSFSLQRLLNRHMKCHSDVKRY   88 (134)
Q Consensus        56 ~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~k~~   88 (134)
                      ++++|.|.  .|++.|.....|..|+++|+++++|
T Consensus         3 ~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            46789999  5999999999999999999999886

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.70  E-value=8.3e-09  Score=58.90  Aligned_cols=46  Identities=24%  Similarity=0.284  Sum_probs=41.4

Q ss_pred             ceecccccccccChhhHHHHHhH-hcCCCc--------cccccCCCcccCcccee
Q psy691           87 RYLCTFCGKGFNDTFDLKRHTRT-HTGKEE--------EEEEDGKTNVLTTEYLV  132 (134)
Q Consensus        87 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~--------~~c~~~~~~~~~~~~l~  132 (134)
                      .|.|..|++.|.....|.+|+++ |+++++        |.|..|++.|.+...|.
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~   79 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLV   79 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHH
T ss_pred             CCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHH
Confidence            46899999999999999999998 999888        99999999999877663

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.69  E-value=7.1e-09  Score=45.39  Aligned_cols=25  Identities=28%  Similarity=0.654  Sum_probs=14.3

Q ss_pred             CceecccccccccChhhHHHHHhHh
Q psy691           86 KRYLCTFCGKGFNDTFDLKRHTRTH  110 (134)
Q Consensus        86 k~~~C~~C~~~f~~~~~l~~H~~~h  110 (134)
                      +||.|..|++.|.....|.+|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhc
Confidence            4555555555555555555555554

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.68  E-value=1e-08  Score=44.78  Aligned_cols=25  Identities=32%  Similarity=0.681  Sum_probs=13.2

Q ss_pred             CceecccccccccChhhHHHHHhHh
Q psy691           86 KRYLCTFCGKGFNDTFDLKRHTRTH  110 (134)
Q Consensus        86 k~~~C~~C~~~f~~~~~l~~H~~~h  110 (134)
                      +||.|..|++.|.....|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHc
Confidence            4455555555555555555555544

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.68  E-value=9e-09  Score=44.81  Aligned_cols=26  Identities=35%  Similarity=0.796  Sum_probs=16.9

Q ss_pred             ceecccccccccChhhHHHHHhHhcC
Q psy691           87 RYLCTFCGKGFNDTFDLKRHTRTHTG  112 (134)
Q Consensus        87 ~~~C~~C~~~f~~~~~l~~H~~~h~~  112 (134)
                      ||.|..|++.|.....|.+|+++|++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            45666666666666666666666665

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.67  E-value=8.5e-09  Score=46.02  Aligned_cols=29  Identities=34%  Similarity=0.713  Sum_probs=19.6

Q ss_pred             CceecccccccccChhhHHHH-HhHhcCCC
Q psy691           86 KRYLCTFCGKGFNDTFDLKRH-TRTHTGKE  114 (134)
Q Consensus        86 k~~~C~~C~~~f~~~~~l~~H-~~~h~~~~  114 (134)
                      +||.|..|++.|.....|..| +++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~   30 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGNL   30 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCCC
Confidence            356777777777777777777 56676653

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.67  E-value=4.1e-10  Score=51.66  Aligned_cols=31  Identities=32%  Similarity=0.491  Sum_probs=29.0

Q ss_pred             CceeccccccccCChHHHHHHHHHcCCCCce
Q psy691           58 TRFACHLCSKSFSLQRLLNRHMKCHSDVKRY   88 (134)
Q Consensus        58 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~   88 (134)
                      ++|.|.+|++.|.....|..|+++|++++||
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            4699999999999999999999999999987

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.67  E-value=2e-08  Score=44.60  Aligned_cols=29  Identities=31%  Similarity=0.600  Sum_probs=26.7

Q ss_pred             CceeccccccccCChHHHHHHHHHcCCCC
Q psy691           58 TRFACHLCSKSFSLQRLLNRHMKCHSDVK   86 (134)
Q Consensus        58 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   86 (134)
                      ++|.|.+|++.|.....|..|++.|.+++
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            57999999999999999999999998764

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.66  E-value=4.2e-08  Score=52.61  Aligned_cols=34  Identities=26%  Similarity=0.465  Sum_probs=31.4

Q ss_pred             cCCCCceecccccccccChhhHHHHHhHhcCCCc
Q psy691           82 HSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEE  115 (134)
Q Consensus        82 h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  115 (134)
                      |.+++||.|..|++.|.....|.+|+++|++++.
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~~   41 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEAQHGVTSL   41 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTSC
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhhhhCCCcc
Confidence            6778999999999999999999999999999754

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.66  E-value=2.2e-08  Score=44.20  Aligned_cols=29  Identities=34%  Similarity=0.843  Sum_probs=26.4

Q ss_pred             CceeccccccccCChHHHHHHHHHcCCCC
Q psy691           58 TRFACHLCSKSFSLQRLLNRHMKCHSDVK   86 (134)
Q Consensus        58 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   86 (134)
                      ++|.|.+|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   29 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCCC
Confidence            36999999999999999999999998764

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.66  E-value=2e-08  Score=47.23  Aligned_cols=33  Identities=27%  Similarity=0.460  Sum_probs=29.0

Q ss_pred             CCCCCceeccccccccCCh-HHHHHHHHHcCCCC
Q psy691           54 RKDNTRFACHLCSKSFSLQ-RLLNRHMKCHSDVK   86 (134)
Q Consensus        54 ~~~~~~~~C~~C~~~f~~~-~~l~~H~~~h~~~k   86 (134)
                      ..++++|.|.+|++.|... ..|..|+++|++++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            4 GSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             CCCCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            3456789999999999999 99999999998764

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.64  E-value=1.7e-08  Score=44.64  Aligned_cols=29  Identities=34%  Similarity=0.589  Sum_probs=26.4

Q ss_pred             CceeccccccccCChHHHHHHHHHcCCCC
Q psy691           58 TRFACHLCSKSFSLQRLLNRHMKCHSDVK   86 (134)
Q Consensus        58 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   86 (134)
                      ++|.|.+|++.|.....|..|+++|.+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCCC
Confidence            47999999999999999999999998764

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.64  E-value=1.8e-08  Score=47.51  Aligned_cols=32  Identities=31%  Similarity=0.624  Sum_probs=27.5

Q ss_pred             CCCCCceeccccccccCChHHHHHHHHHcCCCCceeccc
Q psy691           54 RKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTF   92 (134)
Q Consensus        54 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~   92 (134)
                      ..++++|.|.+|++.|..+.+|..|+       ||.|..
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~-------py~C~~   34 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ-------AYYCSH   34 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH-------HHTSTT
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC-------CeECcC
Confidence            35678999999999999999999998       677653

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.64  E-value=4.2e-08  Score=45.98  Aligned_cols=33  Identities=36%  Similarity=0.495  Sum_probs=29.1

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCC
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDV   85 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   85 (134)
                      ...++++|.|++|++.|.....|..|++.|.++
T Consensus         5 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            5 GSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             TTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             cCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            345678999999999999999999999999864

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.62  E-value=2.2e-08  Score=44.15  Aligned_cols=29  Identities=34%  Similarity=0.657  Sum_probs=26.4

Q ss_pred             CceeccccccccCChHHHHHHHHHcCCCC
Q psy691           58 TRFACHLCSKSFSLQRLLNRHMKCHSDVK   86 (134)
Q Consensus        58 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   86 (134)
                      ++|.|.+|++.|.....|..|+++|.+++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            47999999999999999999999998764

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.59  E-value=4.2e-08  Score=46.19  Aligned_cols=32  Identities=22%  Similarity=0.617  Sum_probs=28.3

Q ss_pred             CCCCceeccc--cccccCChHHHHHHHHHcCCCC
Q psy691           55 KDNTRFACHL--CSKSFSLQRLLNRHMKCHSDVK   86 (134)
Q Consensus        55 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~k   86 (134)
                      .++++|.|.+  |++.|.....|..|+++|++++
T Consensus         4 ~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            4 GKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             SSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            4567899995  9999999999999999998764

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.58  E-value=3.8e-08  Score=43.65  Aligned_cols=30  Identities=17%  Similarity=0.400  Sum_probs=26.9

Q ss_pred             CceeccccccccCChHHHHHHHHHcCCCCc
Q psy691           58 TRFACHLCSKSFSLQRLLNRHMKCHSDVKR   87 (134)
Q Consensus        58 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~   87 (134)
                      ++|.|.+|++.|.....|..|+++|+++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~   30 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCCC
Confidence            368999999999999999999999988753

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.56  E-value=4.2e-08  Score=44.14  Aligned_cols=29  Identities=34%  Similarity=0.687  Sum_probs=26.2

Q ss_pred             Cceecc--ccccccCChHHHHHHHHHcCCCC
Q psy691           58 TRFACH--LCSKSFSLQRLLNRHMKCHSDVK   86 (134)
Q Consensus        58 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~k   86 (134)
                      ++|.|.  .|++.|.....|..|+++|++++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            468998  89999999999999999998864

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.56  E-value=5.9e-08  Score=42.19  Aligned_cols=26  Identities=23%  Similarity=0.618  Sum_probs=24.2

Q ss_pred             CceeccccccccCChHHHHHHHHHcC
Q psy691           58 TRFACHLCSKSFSLQRLLNRHMKCHS   83 (134)
Q Consensus        58 ~~~~C~~C~~~f~~~~~l~~H~~~h~   83 (134)
                      ++|.|.+|++.|.....|..|+++|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHcc
Confidence            57999999999999999999999884

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.56  E-value=5.5e-08  Score=44.04  Aligned_cols=29  Identities=31%  Similarity=0.582  Sum_probs=26.6

Q ss_pred             Cceecc--ccccccCChHHHHHHHHHcCCCC
Q psy691           58 TRFACH--LCSKSFSLQRLLNRHMKCHSDVK   86 (134)
Q Consensus        58 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~k   86 (134)
                      ++|.|.  .|++.|.....|..|+++|++++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            579999  89999999999999999998764

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.54  E-value=5.1e-08  Score=42.70  Aligned_cols=27  Identities=30%  Similarity=0.819  Sum_probs=24.9

Q ss_pred             CceeccccccccCChHHHHHHHHHcCC
Q psy691           58 TRFACHLCSKSFSLQRLLNRHMKCHSD   84 (134)
Q Consensus        58 ~~~~C~~C~~~f~~~~~l~~H~~~h~~   84 (134)
                      ++|.|.+|++.|.....|..|+++|++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            579999999999999999999998864

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.54  E-value=3.3e-08  Score=43.49  Aligned_cols=29  Identities=28%  Similarity=0.456  Sum_probs=26.2

Q ss_pred             CceeccccccccCChHHHHHHHHHcCCCC
Q psy691           58 TRFACHLCSKSFSLQRLLNRHMKCHSDVK   86 (134)
Q Consensus        58 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   86 (134)
                      ++|.|.+|++.|.....|..|++.|.+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            46999999999999999999999998764

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.54  E-value=4.3e-08  Score=42.75  Aligned_cols=26  Identities=27%  Similarity=0.580  Sum_probs=24.0

Q ss_pred             CceeccccccccCChHHHHHHHHHcC
Q psy691           58 TRFACHLCSKSFSLQRLLNRHMKCHS   83 (134)
Q Consensus        58 ~~~~C~~C~~~f~~~~~l~~H~~~h~   83 (134)
                      ++|.|.+|++.|.....|..|+++|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            57999999999999999999998874

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.53  E-value=6.5e-08  Score=48.37  Aligned_cols=33  Identities=21%  Similarity=0.496  Sum_probs=27.8

Q ss_pred             CCCCceeccccccccCChHHHHHHHH-HcCCCCc
Q psy691           55 KDNTRFACHLCSKSFSLQRLLNRHMK-CHSDVKR   87 (134)
Q Consensus        55 ~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~k~   87 (134)
                      .++++|.|.+|++.|....+|..|++ +|.++..
T Consensus         3 t~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            3 DRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             TTTSCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            45789999999999999999999999 8988653

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.92  E-value=1.1e-08  Score=45.34  Aligned_cols=29  Identities=28%  Similarity=0.558  Sum_probs=26.2

Q ss_pred             CceeccccccccCChHHHHHHHHHcCCCC
Q psy691           58 TRFACHLCSKSFSLQRLLNRHMKCHSDVK   86 (134)
Q Consensus        58 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   86 (134)
                      ++|.|.+|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            36999999999999999999999998764

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.92  E-value=1.1e-08  Score=44.20  Aligned_cols=24  Identities=42%  Similarity=0.863  Sum_probs=14.4

Q ss_pred             ceecccccccccChhhHHHHHhHh
Q psy691           87 RYLCTFCGKGFNDTFDLKRHTRTH  110 (134)
Q Consensus        87 ~~~C~~C~~~f~~~~~l~~H~~~h  110 (134)
                      ||.|..|++.|.....|..|+++|
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            555666666666666666665554

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.51  E-value=1e-07  Score=44.82  Aligned_cols=32  Identities=25%  Similarity=0.481  Sum_probs=28.3

Q ss_pred             CCCCCceeccccccccCChHHHHHH-HHHcCCC
Q psy691           54 RKDNTRFACHLCSKSFSLQRLLNRH-MKCHSDV   85 (134)
Q Consensus        54 ~~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~   85 (134)
                      ..++++|.|.+|++.|.....|..| ++.|+++
T Consensus         4 H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            4 GSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             SSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             cCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            3457899999999999999999999 8889864

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.50  E-value=5.9e-08  Score=42.07  Aligned_cols=27  Identities=33%  Similarity=0.793  Sum_probs=23.7

Q ss_pred             ceeccccccccCChHHHHHHHHHcCCC
Q psy691           59 RFACHLCSKSFSLQRLLNRHMKCHSDV   85 (134)
Q Consensus        59 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   85 (134)
                      +|.|.+|++.|.....|..|+++|+++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            489999999999999999999999763

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.86  E-value=1.7e-08  Score=44.91  Aligned_cols=29  Identities=28%  Similarity=0.639  Sum_probs=26.3

Q ss_pred             CceeccccccccCChHHHHHHHHHcCCCC
Q psy691           58 TRFACHLCSKSFSLQRLLNRHMKCHSDVK   86 (134)
Q Consensus        58 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   86 (134)
                      ++|.|.+|++.|.....|..|+++|++++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   30 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTGEK   30 (30)
Confidence            57999999999999999999999998753

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.45  E-value=1e-07  Score=41.89  Aligned_cols=25  Identities=48%  Similarity=1.008  Sum_probs=15.0

Q ss_pred             ceecc--cccccccChhhHHHHHhHhc
Q psy691           87 RYLCT--FCGKGFNDTFDLKRHTRTHT  111 (134)
Q Consensus        87 ~~~C~--~C~~~f~~~~~l~~H~~~h~  111 (134)
                      +|.|.  .|++.|.....|..|+++|+
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            45566  56666666666666666554

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.42  E-value=9.9e-08  Score=42.35  Aligned_cols=29  Identities=41%  Similarity=0.756  Sum_probs=25.6

Q ss_pred             CceeccccccccCChHHHHHH-HHHcCCCC
Q psy691           58 TRFACHLCSKSFSLQRLLNRH-MKCHSDVK   86 (134)
Q Consensus        58 ~~~~C~~C~~~f~~~~~l~~H-~~~h~~~k   86 (134)
                      ++|.|..|++.|.....|..| ++.|.+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~   30 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGNL   30 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCCC
Confidence            369999999999999999999 68898764

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.40  E-value=1.2e-07  Score=47.08  Aligned_cols=35  Identities=20%  Similarity=0.473  Sum_probs=30.0

Q ss_pred             CCCCCCCceecc--ccccccCChHHHHHHHHHcCCCC
Q psy691           52 TGRKDNTRFACH--LCSKSFSLQRLLNRHMKCHSDVK   86 (134)
Q Consensus        52 ~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~k   86 (134)
                      ....++++|.|.  .|++.|.....|..|+++|++++
T Consensus        11 ~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A           11 VKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             CEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            335567899996  69999999999999999998864

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=98.37  E-value=9.4e-07  Score=46.98  Aligned_cols=49  Identities=24%  Similarity=0.327  Sum_probs=42.4

Q ss_pred             cccccccCChHHHHHHHH-HcCCCC------ceeccc--ccccccChhhHHHHHhHhc
Q psy691           63 HLCSKSFSLQRLLNRHMK-CHSDVK------RYLCTF--CGKGFNDTFDLKRHTRTHT  111 (134)
Q Consensus        63 ~~C~~~f~~~~~l~~H~~-~h~~~k------~~~C~~--C~~~f~~~~~l~~H~~~h~  111 (134)
                      ..|++.|.....|..|+. .|.+.+      +|.|.+  |++.+.....|..|++..+
T Consensus         7 ~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            7 KECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             TTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             CCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            349999999999999985 698766      799985  9999999999999998753

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.72  E-value=4.5e-08  Score=42.16  Aligned_cols=26  Identities=27%  Similarity=0.669  Sum_probs=23.6

Q ss_pred             CceeccccccccCChHHHHHHHHHcC
Q psy691           58 TRFACHLCSKSFSLQRLLNRHMKCHS   83 (134)
Q Consensus        58 ~~~~C~~C~~~f~~~~~l~~H~~~h~   83 (134)
                      ++|.|.+|++.|.....|..|+++|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            47999999999999999999999874

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.27  E-value=5.9e-07  Score=39.29  Aligned_cols=27  Identities=44%  Similarity=0.848  Sum_probs=24.5

Q ss_pred             Cceecc--ccccccCChHHHHHHHHHcCC
Q psy691           58 TRFACH--LCSKSFSLQRLLNRHMKCHSD   84 (134)
Q Consensus        58 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~   84 (134)
                      ++|.|.  .|++.|.....|..|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            368999  999999999999999999864

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=97.45  E-value=2.8e-05  Score=46.44  Aligned_cols=27  Identities=19%  Similarity=0.383  Sum_probs=14.5

Q ss_pred             CCCCceeccccccccCChHHHHHHHHH
Q psy691           55 KDNTRFACHLCSKSFSLQRLLNRHMKC   81 (134)
Q Consensus        55 ~~~~~~~C~~C~~~f~~~~~l~~H~~~   81 (134)
                      .+.++|.|..|++.|.+...|..|+++
T Consensus        46 tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           46 PGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             GGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CCCcceEcccCcchhCCHHHHHHHHhh
Confidence            344455555555555555555555443

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=97.12  E-value=0.00069  Score=40.73  Aligned_cols=52  Identities=17%  Similarity=0.347  Sum_probs=38.2

Q ss_pred             CCceeccccccccCChHHHHHHH--HHcC-------------------------------CCCceecccccccccChhhH
Q psy691           57 NTRFACHLCSKSFSLQRLLNRHM--KCHS-------------------------------DVKRYLCTFCGKGFNDTFDL  103 (134)
Q Consensus        57 ~~~~~C~~C~~~f~~~~~l~~H~--~~h~-------------------------------~~k~~~C~~C~~~f~~~~~l  103 (134)
                      .+++.|.+|...|.+...+..|.  +.|.                               +.+.|-|.+|++.|.....+
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~~  109 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPAEISDGEDRSKCCPVCNMTFSSPVVA  109 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCSSCCSSCCCTTTEETTTTEECSSHHHH
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCccccccCCCCCeEcCCCCCEeCCHHHH
Confidence            35689999999999999999998  3341                               12346677777777777777


Q ss_pred             HHHHh
Q psy691          104 KRHTR  108 (134)
Q Consensus       104 ~~H~~  108 (134)
                      ..|..
T Consensus       110 ~~H~~  114 (127)
T 1zu1_A          110 ESHYI  114 (127)
T ss_dssp             HHHHT
T ss_pred             HHHHC
Confidence            77754

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=96.89  E-value=0.00036  Score=36.79  Aligned_cols=44  Identities=25%  Similarity=0.408  Sum_probs=34.1

Q ss_pred             eeccc--ccccccChhhHHHHH-hHhcCCC------cccc--ccCCCcccCccce
Q psy691           88 YLCTF--CGKGFNDTFDLKRHT-RTHTGKE------EEEE--EDGKTNVLTTEYL  131 (134)
Q Consensus        88 ~~C~~--C~~~f~~~~~l~~H~-~~h~~~~------~~~c--~~~~~~~~~~~~l  131 (134)
                      +.|.+  |++.|.....|..|+ +.|.+.+      +|.|  ..|.+.+.....|
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L   56 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASI   56 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHH
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHH
Confidence            56776  999999999999998 4688766      7999  4777766555444

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.70  E-value=0.00057  Score=40.77  Aligned_cols=30  Identities=27%  Similarity=0.332  Sum_probs=27.3

Q ss_pred             HHcCCCCceecccccccccChhhHHHHHhH
Q psy691           80 KCHSDVKRYLCTFCGKGFNDTFDLKRHTRT  109 (134)
Q Consensus        80 ~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~  109 (134)
                      .-|+|+++|.|..|++.|.+...|..|+++
T Consensus        43 ed~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           43 PDLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             ccCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            358889999999999999999999999875

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.49  E-value=0.0022  Score=31.28  Aligned_cols=23  Identities=30%  Similarity=0.559  Sum_probs=15.8

Q ss_pred             CceeccccccccCChHHHHHHHH
Q psy691           58 TRFACHLCSKSFSLQRLLNRHMK   80 (134)
Q Consensus        58 ~~~~C~~C~~~f~~~~~l~~H~~   80 (134)
                      .+|.|+-|+..|.....|+.||+
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhh
Confidence            45677777777777777777766

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.43  E-value=0.0046  Score=30.14  Aligned_cols=29  Identities=24%  Similarity=0.331  Sum_probs=24.9

Q ss_pred             CceecccccccccChhhHHHHHhHhcCCC
Q psy691           86 KRYLCTFCGKGFNDTFDLKRHTRTHTGKE  114 (134)
Q Consensus        86 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~  114 (134)
                      -+|.|+-|+..|.....|+.||+.-.++.
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~HmkycCp~~   39 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYCCPEM   39 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHHCTTT
T ss_pred             CceeCCcccccccchHHHHhhhhhcCcch
Confidence            57999999999999999999999655543

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=96.16  E-value=0.0053  Score=38.49  Aligned_cols=62  Identities=15%  Similarity=0.290  Sum_probs=35.3

Q ss_pred             ccccccCChHHHHHHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccccCCCcccCc
Q psy691           64 LCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDGKTNVLTT  128 (134)
Q Consensus        64 ~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~~~~  128 (134)
                      -|+.... ...+..|... =.-++..|+.|+..+ .+..|..|.......+...|..|+..+...
T Consensus        89 GC~~~~~-~~~l~~H~~~-C~~~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~~~  150 (170)
T 3hcs_A           89 GCLHKME-LRHLEDHQAH-CEFALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMAFE  150 (170)
T ss_dssp             TCCCEEE-GGGHHHHHTT-CTTSEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEEGG
T ss_pred             CCCceec-HhHHHHHHhc-CCceeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccCHH
Confidence            3555544 3445566532 123456676676665 445566676666666666676666655443

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=95.03  E-value=0.0067  Score=33.01  Aligned_cols=49  Identities=27%  Similarity=0.518  Sum_probs=38.6

Q ss_pred             CCceeccccccccCChHHHHHHHHHcCCCCceecccccccccChhhHHHHH
Q psy691           57 NTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHT  107 (134)
Q Consensus        57 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~  107 (134)
                      .-.|.|..|+..++ +..+..|...-.+...|.|..|++.|.. ..++.|.
T Consensus         8 MV~F~C~~Cgd~lK-K~kv~~H~~~Cr~~~~~SCIDC~~~F~~-~~y~~Ht   56 (79)
T 1wjv_A            8 MVFFTCNACGESVK-KIQVEKHVSNCRNCECLSCIDCGKDFWG-DDYKSHV   56 (79)
T ss_dssp             CCEEEESSSCCEEE-TTHHHHHHHHCTTCCEEEETTTTEEEEG-GGTTTCC
T ss_pred             eeEEEcCCCCCeee-cccchhHHhhCCCCCcEEecccCCeeCC-CCEeCEe
Confidence            34699999999987 5568899877666667999999999986 4455553

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=94.28  E-value=0.02  Score=31.82  Aligned_cols=30  Identities=27%  Similarity=0.506  Sum_probs=23.3

Q ss_pred             CceeccccccccCChHHHHHHHHHcCCCCceec
Q psy691           58 TRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLC   90 (134)
Q Consensus        58 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C   90 (134)
                      ....|-+||+.|.   .|.+|+..|+|..|...
T Consensus        20 d~iiClecGK~fK---~LkRHL~~~hgltpeeY   49 (87)
T 2jsp_A           20 DHIVCLECGGSFK---SLKRHLTTHHSMTPEEY   49 (87)
T ss_dssp             SCEECTBTCCEES---BHHHHHHHTTCSCHHHH
T ss_pred             CceEecccchhhH---HHHHHHHHccCCCHHHH
Confidence            3468999999998   47899999878776543

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=93.47  E-value=0.087  Score=23.87  Aligned_cols=25  Identities=32%  Similarity=0.589  Sum_probs=20.8

Q ss_pred             ceeccccccccCChHHHHHHHHH-cC
Q psy691           59 RFACHLCSKSFSLQRLLNRHMKC-HS   83 (134)
Q Consensus        59 ~~~C~~C~~~f~~~~~l~~H~~~-h~   83 (134)
                      .|.|++|-+.+.....|..|... |.
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~   30 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHD   30 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhccc
Confidence            48899999999999999999875 43

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=93.34  E-value=0.14  Score=28.37  Aligned_cols=30  Identities=40%  Similarity=0.686  Sum_probs=24.7

Q ss_pred             CceecccccccccChhhHHHHHhHhcCCCcccc
Q psy691           86 KRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEE  118 (134)
Q Consensus        86 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c  118 (134)
                      .-..|..||+.|..   |.+|+.+|+|..|...
T Consensus        20 d~iiClecGK~fK~---LkRHL~~~hgltpeeY   49 (87)
T 2jsp_A           20 DHIVCLECGGSFKS---LKRHLTTHHSMTPEEY   49 (87)
T ss_dssp             SCEECTBTCCEESB---HHHHHHHTTCSCHHHH
T ss_pred             CceEecccchhhHH---HHHHHHHccCCCHHHH
Confidence            44799999999984   8899999889877544

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=92.41  E-value=0.17  Score=31.53  Aligned_cols=57  Identities=18%  Similarity=0.302  Sum_probs=42.7

Q ss_pred             CceeccccccccCChHHHHHHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCcc
Q psy691           58 TRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEE  116 (134)
Q Consensus        58 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  116 (134)
                      .+..|+.|+..+. +..|..|....=..+...|..|+..+.. ..|..|..++.|+.++
T Consensus       109 ~~v~C~~C~~~~~-r~~l~~H~~~~C~~r~~~C~~C~~~~~~-~~l~~H~~~~~~~~~~  165 (170)
T 3hcs_A          109 ALMDCPQCQRPFQ-KFHINIHILKDCPRRQVSCDNCAASMAF-EDKEIHDQNCPLALEH  165 (170)
T ss_dssp             SEEECTTTCCEEE-GGGHHHHHHHTCTTCEEECTTTCCEEEG-GGHHHHHTTCCC----
T ss_pred             eeeECCCCChHHH-HHHHHHHhhhhCCCCCeECCCCCCccCH-HHHHhHHHhCcChhhh
Confidence            4567888998874 6678889877777788899999887755 6788999999887764

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=92.28  E-value=0.39  Score=21.90  Aligned_cols=23  Identities=22%  Similarity=0.421  Sum_probs=15.6

Q ss_pred             CceeccccccccCChHHHHHHHH
Q psy691           58 TRFACHLCSKSFSLQRLLNRHMK   80 (134)
Q Consensus        58 ~~~~C~~C~~~f~~~~~l~~H~~   80 (134)
                      ..+.|..|...|..-..+..|.+
T Consensus         7 ~~~~C~~C~IsF~~l~ty~aHKk   29 (36)
T 1fu9_A            7 MKKYCSTCDISFNYVKTYLAHKQ   29 (36)
T ss_dssp             CCSEETTTTEECSSHHHHHHHHH
T ss_pred             CcCeeccccceehhhHHHhhhhe
Confidence            34677777777777777776655

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=92.07  E-value=0.15  Score=23.11  Aligned_cols=24  Identities=21%  Similarity=0.541  Sum_probs=21.4

Q ss_pred             CceecccccccccChhhHHHHHhH
Q psy691           86 KRYLCTFCGKGFNDTFDLKRHTRT  109 (134)
Q Consensus        86 k~~~C~~C~~~f~~~~~l~~H~~~  109 (134)
                      ..|.|++|-+.|.....|..|-..
T Consensus         4 EGFiCP~C~~~l~s~~~L~~Hye~   27 (34)
T 3mjh_B            4 EGFICPQCMKSLGSADELFKHYEA   27 (34)
T ss_dssp             EEEECTTTCCEESSHHHHHHHHHH
T ss_pred             cccCCcHHHHHcCCHHHHHHHHHh
Confidence            359999999999999999999665

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=91.72  E-value=0.23  Score=22.67  Aligned_cols=30  Identities=20%  Similarity=0.322  Sum_probs=24.6

Q ss_pred             CCceecccccccccChhhHHHHHhHhcCCC
Q psy691           85 VKRYLCTFCGKGFNDTFDLKRHTRTHTGKE  114 (134)
Q Consensus        85 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~  114 (134)
                      ..++.|..|+-+|.....+..|++.....+
T Consensus         6 ~~~~~C~~C~IsF~~l~ty~aHKk~YC~s~   35 (36)
T 1fu9_A            6 VMKKYCSTCDISFNYVKTYLAHKQFYCKNK   35 (36)
T ss_dssp             CCCSEETTTTEECSSHHHHHHHHHHTSCCC
T ss_pred             cCcCeeccccceehhhHHHhhhheecCCCC
Confidence            456899999999999999999988754433

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=88.20  E-value=0.97  Score=26.79  Aligned_cols=27  Identities=19%  Similarity=0.432  Sum_probs=23.1

Q ss_pred             CCCCCceeccccccccCChHHHHHHHH
Q psy691           54 RKDNTRFACHLCSKSFSLQRLLNRHMK   80 (134)
Q Consensus        54 ~~~~~~~~C~~C~~~f~~~~~l~~H~~   80 (134)
                      ......|.|.+|.+.|.+...+..|..
T Consensus        88 ~~~~~~~~C~~C~~~f~s~~~~~~H~~  114 (127)
T 1zu1_A           88 DGEDRSKCCPVCNMTFSSPVVAESHYI  114 (127)
T ss_dssp             SCCCTTTEETTTTEECSSHHHHHHHHT
T ss_pred             cCCCCCeEcCCCCCEeCCHHHHHHHHC
Confidence            345667999999999999999999975

>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}

Probab=87.96  E-value=0.17  Score=27.61  Aligned_cols=41  Identities=20%  Similarity=0.451  Sum_probs=27.0

Q ss_pred             ceeccccccccCChHHHHHHHHHcCC----------------CCceecccccccccCh
Q psy691           59 RFACHLCSKSFSLQRLLNRHMKCHSD----------------VKRYLCTFCGKGFNDT  100 (134)
Q Consensus        59 ~~~C~~C~~~f~~~~~l~~H~~~h~~----------------~k~~~C~~C~~~f~~~  100 (134)
                      .-+|++||..... ..|...|..-..                +--|+|+.|+..|..+
T Consensus         8 ~~~~PlCG~~L~W-~eLIeQML~~en~~ei~kDr~~Fl~~~e~F~FkCP~CgEEFyG~   64 (95)
T 2k5c_A            8 MAKCPICGSPLKW-EELIEEMLIIENFEEIVKDRERFLAQVEEFVFKCPVCGEEFYGK   64 (95)
T ss_dssp             CEECSSSCCEECH-HHHHHHSTTCSTHHHHTTCHHHHHHHHHHSEEECTTTCCEEETT
T ss_pred             cccCCcCCCccCH-HHHHHHHHhhccHHHHHhhHHHHHHHHHHHhhcCCCccHHHhcc
Confidence            3589999999774 445555443221                1258999999888764

>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}

Probab=87.00  E-value=0.36  Score=25.71  Aligned_cols=59  Identities=24%  Similarity=0.470  Sum_probs=37.0

Q ss_pred             Cceec-cccccccCChHHHHHHHHHcCCCCceecccccccccChhhHHHHHhHhcCCCccccc
Q psy691           58 TRFAC-HLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEE  119 (134)
Q Consensus        58 ~~~~C-~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~  119 (134)
                      .+-.| ..|+..+.+ ..|..|+...=..++..|.+|+..|.. ..|..|.. .-...+-.|+
T Consensus        15 ~~v~C~~~C~~~v~r-~~l~~H~~~~C~~r~v~C~~C~~~~~~-~~l~~H~~-~Cp~~~v~C~   74 (76)
T 2yuc_A           15 NVIPCPNRCPMKLSR-RDLPAHLQHDCPKRRLKCEFCGCDFSG-EAYESHEG-MCPQESSGPS   74 (76)
T ss_dssp             SCCBCTTCCSCBCCS-SSSTTTTTTSCTTSCCCCSSSCCCCCH-HHHHHTTT-SCTTSSCCCS
T ss_pred             cccCCCccccHHhhH-hHHHhhCHhhCCCcceECCCCCCccCH-HHHHHHHh-HCCCCccCCC
Confidence            34567 468877764 556777664445677889999988765 45666663 2334444443

>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A

Probab=86.48  E-value=0.72  Score=19.80  Aligned_cols=22  Identities=23%  Similarity=0.384  Sum_probs=18.6

Q ss_pred             ceeccccccccCChHHHHHHHH
Q psy691           59 RFACHLCSKSFSLQRLLNRHMK   80 (134)
Q Consensus        59 ~~~C~~C~~~f~~~~~l~~H~~   80 (134)
                      .|.|++|.........|+.|..
T Consensus         3 k~~CpvCk~q~Pd~kt~~~H~e   24 (28)
T 2jvx_A            3 DFCCPKCQYQAPDMDTLQIHVM   24 (28)
T ss_dssp             CEECTTSSCEESSHHHHHHHHH
T ss_pred             cccCccccccCcChHHHHHHHH
Confidence            4789999999999888888864

>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82

Probab=86.09  E-value=0.64  Score=26.70  Aligned_cols=33  Identities=18%  Similarity=0.227  Sum_probs=22.3

Q ss_pred             CCceecccccccccChhhHHHHHhHhcCCCccccccCCCcccCc
Q psy691           85 VKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDGKTNVLTT  128 (134)
Q Consensus        85 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~~~~  128 (134)
                      ..||.|..||..|.           -.-.+|-+|+.|+...+..
T Consensus        65 v~p~~C~~CG~~F~-----------~~~~kPsrCP~CkSe~Ie~   97 (105)
T 2gmg_A           65 IKPAQCRKCGFVFK-----------AEINIPSRCPKCKSEWIEE   97 (105)
T ss_dssp             ECCCBBTTTCCBCC-----------CCSSCCSSCSSSCCCCBCC
T ss_pred             EECcChhhCcCeec-----------ccCCCCCCCcCCCCCccCC
Confidence            35788999988881           1235677888777765544

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=85.41  E-value=0.92  Score=20.01  Aligned_cols=23  Identities=26%  Similarity=0.554  Sum_probs=20.1

Q ss_pred             eeccccccccCChHHHHHHHHHc
Q psy691           60 FACHLCSKSFSLQRLLNRHMKCH   82 (134)
Q Consensus        60 ~~C~~C~~~f~~~~~l~~H~~~h   82 (134)
                      -.|.+|.+.+..-.+|..|++.-
T Consensus        10 qhcrfckkkysdvknlikhire~   32 (37)
T 2elu_A           10 QHCRFCKKKYSDVKNLIKHIRDA   32 (37)
T ss_dssp             CEETTTTEECSSHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHh
Confidence            47999999999999999998863

>1wir_A Protein arginine N-methyltransferase 3; C2H2 zinc finger domain, PRMT3, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.37.1.5

Probab=85.20  E-value=0.73  Score=27.23  Aligned_cols=30  Identities=17%  Similarity=0.341  Sum_probs=25.5

Q ss_pred             CCCCceeccccccccCChHHHHHHHHHcCC
Q psy691           55 KDNTRFACHLCSKSFSLQRLLNRHMKCHSD   84 (134)
Q Consensus        55 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   84 (134)
                      .+..+..|-.|.+.|.....+..|++..++
T Consensus        11 ~e~~~~~CLFCd~~~~s~~~~l~H~k~~H~   40 (121)
T 1wir_A           11 HGRQHTPCLFCDRLFASAEETFSHCKLEHQ   40 (121)
T ss_dssp             CCCCCEECSSSCCEESSHHHHHHHHHHSSC
T ss_pred             CCCCceeEecCCCcccCHHHHHHHHHHhcC
Confidence            344568999999999999999999998655

>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4

Probab=84.85  E-value=0.67  Score=23.15  Aligned_cols=21  Identities=24%  Similarity=0.524  Sum_probs=15.9

Q ss_pred             eeccccccccCChHHHHHHHH
Q psy691           60 FACHLCSKSFSLQRLLNRHMK   80 (134)
Q Consensus        60 ~~C~~C~~~f~~~~~l~~H~~   80 (134)
                      -.|..|+..|..+..++.|+.
T Consensus        14 ~eC~lC~vkYs~r~slqDHIF   34 (55)
T 2yrk_A           14 PECTLCGVKYSARLSIRDHIF   34 (55)
T ss_dssp             SCCTTTTCCCCSSSCHHHHHT
T ss_pred             ccccccCcccccccchhhhhc
Confidence            478888888887777777764

>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A

Probab=84.25  E-value=0.41  Score=30.88  Aligned_cols=13  Identities=15%  Similarity=0.432  Sum_probs=7.8

Q ss_pred             CceeccccccccC
Q psy691           58 TRFACHLCSKSFS   70 (134)
Q Consensus        58 ~~~~C~~C~~~f~   70 (134)
                      ..|.|..||..+.
T Consensus       170 ~~~~C~~CG~i~~  182 (202)
T 1yuz_A          170 KFHLCPICGYIHK  182 (202)
T ss_dssp             CEEECSSSCCEEE
T ss_pred             cEEEECCCCCEEc
Confidence            3566666666543

>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=84.12  E-value=0.59  Score=25.25  Aligned_cols=25  Identities=24%  Similarity=0.537  Sum_probs=14.4

Q ss_pred             eeccccccccc-------ChhhHHHHHhHhcC
Q psy691           88 YLCTFCGKGFN-------DTFDLKRHTRTHTG  112 (134)
Q Consensus        88 ~~C~~C~~~f~-------~~~~l~~H~~~h~~  112 (134)
                      -.|.+|++.+.       .-++|.+|++.++.
T Consensus        29 A~Ck~C~k~ls~g~~s~~GTS~L~rHL~~~H~   60 (76)
T 2djr_A           29 ATCRLCGRQVSRGPGVNVGTTALWKHLKSMHR   60 (76)
T ss_dssp             EEESSSCCBCCCCSSCCSSSCHHHHHHHHTTH
T ss_pred             EECCCCCCccCCCCCCCCchHHHHHHHHHHCH
Confidence            44555555544       34677777776554

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=83.05  E-value=0.58  Score=25.38  Aligned_cols=46  Identities=15%  Similarity=0.335  Sum_probs=33.7

Q ss_pred             CCCceecccccccccChhhHHHHHhHhcCCCccccccCCCcccCccc
Q psy691           84 DVKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDGKTNVLTTEY  130 (134)
Q Consensus        84 ~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~~~~~~  130 (134)
                      ...-|.|..|+..+. +..+..|...-.+-..|.|.-|...|...++
T Consensus         7 ~MV~F~C~~Cgd~lK-K~kv~~H~~~Cr~~~~~SCIDC~~~F~~~~y   52 (79)
T 1wjv_A            7 GMVFFTCNACGESVK-KIQVEKHVSNCRNCECLSCIDCGKDFWGDDY   52 (79)
T ss_dssp             CCCEEEESSSCCEEE-TTHHHHHHHHCTTCCEEEETTTTEEEEGGGT
T ss_pred             ceeEEEcCCCCCeee-cccchhHHhhCCCCCcEEecccCCeeCCCCE
Confidence            345689999998765 4678889766555567999888888865443

>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=81.79  E-value=4.3  Score=22.41  Aligned_cols=10  Identities=20%  Similarity=0.780  Sum_probs=5.3

Q ss_pred             eecccccccc
Q psy691           60 FACHLCSKSF   69 (134)
Q Consensus        60 ~~C~~C~~~f   69 (134)
                      |.|++|...|
T Consensus         8 ~~CPI~~~~~   17 (94)
T 2yu4_A            8 FTCPITKEEM   17 (94)
T ss_dssp             CBCTTTCSBC
T ss_pred             eECcCcCchh
Confidence            5566555444

>2k9h_A Glycoprotein; hantavirus, zinc finger, CCHC, metal binding protein; NMR {Andes virus}

Probab=80.70  E-value=3.9  Score=20.42  Aligned_cols=48  Identities=17%  Similarity=0.364  Sum_probs=35.4

Q ss_pred             ceeccccccccCChHHHHHHHHHcCCCCceeccccc-ccccChhhHHHHHhH
Q psy691           59 RFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCG-KGFNDTFDLKRHTRT  109 (134)
Q Consensus        59 ~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~-~~f~~~~~l~~H~~~  109 (134)
                      ...|++|...-.....|..|..+-...   +|++|- ..-...+.|+.|-++
T Consensus         3 smvC~~C~~ECET~kEl~~H~~sCp~g---qCPYC~~~~e~tesAlQaHfkv   51 (57)
T 2k9h_A            3 SMVCDVCHHECETAKELESHRQSCING---QCPYCMTITEATESALQAHYSI   51 (57)
T ss_dssp             TTBCTTTCCBCSSTTTHHHHHHHHTTT---BCTTTCCBCCSSHHHHHHHHTT
T ss_pred             cchhhHHHhhhhhHHHHHHHhccCCCC---CCCcccCcCCcCHHHHHHHHHH
Confidence            357888888888888999998876543   577764 344567888888664

>1wir_A Protein arginine N-methyltransferase 3; C2H2 zinc finger domain, PRMT3, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.37.1.5

Probab=80.38  E-value=4.1  Score=24.00  Aligned_cols=29  Identities=17%  Similarity=0.356  Sum_probs=25.3

Q ss_pred             CCCceecccccccccChhhHHHHHhHhcC
Q psy691           84 DVKRYLCTFCGKGFNDTFDLKRHTRTHTG  112 (134)
Q Consensus        84 ~~k~~~C~~C~~~f~~~~~l~~H~~~h~~  112 (134)
                      ...+..|.+|.+.|.....+..|++..|+
T Consensus        12 e~~~~~CLFCd~~~~s~~~~l~H~k~~H~   40 (121)
T 1wir_A           12 GRQHTPCLFCDRLFASAEETFSHCKLEHQ   40 (121)
T ss_dssp             CCCCEECSSSCCEESSHHHHHHHHHHSSC
T ss_pred             CCCceeEecCCCcccCHHHHHHHHHHhcC
Confidence            34679999999999999999999998665

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	134
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	2e-10
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	6e-08
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	2e-07
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	7e-07
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	1e-06
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	2e-06
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	3e-06
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	7e-06
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	2e-05
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	2e-05
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	2e-05
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	3e-05
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	3e-05
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	3e-05
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	4e-05
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	5e-05
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	0.004
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	1e-04
d1ubdc4	28	g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger	1e-04
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	2e-04
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	3e-04
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	0.004
d2epra1	35	g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [	0.001
d1ubdc2	28	g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger	0.002

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.5 bits (120), Expect = 2e-10
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)

Query: 60  FACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTH 110
           + C  C KSF+ +   +RHM  H  ++ Y C  CGK F     L  H + H
Sbjct: 4   YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.0 bits (104), Expect = 6e-08
 Identities = 16/36 (44%), Positives = 21/36 (58%)

Query: 77  RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
           R      + +RY C  CGK F+ + DL +H RTHTG
Sbjct: 2   RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG 37

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.6 bits (101), Expect = 2e-07
 Identities = 15/31 (48%), Positives = 18/31 (58%)

Query: 82  HSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
           HS  K Y C  CGK F+ +  L +H R HTG
Sbjct: 2   HSGEKPYGCVECGKAFSRSSILVQHQRVHTG 32

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 40.7 bits (96), Expect = 7e-07
 Identities = 10/27 (37%), Positives = 15/27 (55%)

Query: 86  KRYLCTFCGKGFNDTFDLKRHTRTHTG 112
           + ++C  C + F     LKRH R+HT 
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTN 27

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.3 bits (95), Expect = 1e-06
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 86  KRYLCTFCGKGFNDTFDLKRHTRTHTG 112
           K + C  C + F+ +  L  H RTHTG
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTG 28

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.6 bits (93), Expect = 2e-06
 Identities = 9/27 (33%), Positives = 14/27 (51%)

Query: 86  KRYLCTFCGKGFNDTFDLKRHTRTHTG 112
           K++ C  C K F  +  L +H +TH  
Sbjct: 1   KKFACPECPKRFMRSDHLSKHIKTHQN 27

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.3 bits (92), Expect = 3e-06
 Identities = 9/34 (26%), Positives = 14/34 (41%)

Query: 80  KCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGK 113
           + H+  K Y C+ C K F     L  H + +   
Sbjct: 1   RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP 34

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.2 bits (89), Expect = 7e-06
 Identities = 8/31 (25%), Positives = 13/31 (41%)

Query: 82  HSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
            S  + ++C  C   F    +  RH + HT 
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLKVHTD 32

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.0 bits (86), Expect = 2e-05
 Identities = 7/35 (20%), Positives = 15/35 (42%)

Query: 78  HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
             +  + +K + C  C + F+ +  L  H + H  
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML 36

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.9 bits (86), Expect = 2e-05
 Identities = 11/30 (36%), Positives = 14/30 (46%), Gaps = 2/30 (6%)

Query: 86  KRYLCTF--CGKGFNDTFDLKRHTRTHTGK 113
           + Y C    C K F    DL RH ++H  K
Sbjct: 2   RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.9 bits (86), Expect = 2e-05
 Identities = 14/29 (48%), Positives = 21/29 (72%), Gaps = 2/29 (6%)

Query: 86  KRYLCTF--CGKGFNDTFDLKRHTRTHTG 112
           + ++CT+  CGK F  + +L+RH RTHTG
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTHTG 29

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 37.2 bits (86), Expect = 3e-05
 Identities = 9/41 (21%), Positives = 20/41 (48%), Gaps = 3/41 (7%)

Query: 74  LLNRHMKCHSDVKRYLCTFCGKG--FNDTFDLKRHTRTHTG 112
            +++++K     K + C F G    F   ++++ H +TH  
Sbjct: 6   SIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLE 45

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.5 bits (85), Expect = 3e-05
 Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 2/29 (6%)

Query: 86  KRYLCTF--CGKGFNDTFDLKRHTRTHTG 112
           K + CTF  C K ++   +LK H R+HTG
Sbjct: 1   KPHKCTFEGCRKSYSRLENLKTHLRSHTG 29

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.5 bits (85), Expect = 3e-05
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 2/29 (6%)

Query: 86  KRYLCTF--CGKGFNDTFDLKRHTRTHTG 112
           + Y C    C + F+ + DL RH R HTG
Sbjct: 1   RPYACPVESCDRRFSRSADLTRHIRIHTG 29

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.1 bits (84), Expect = 4e-05
 Identities = 9/33 (27%), Positives = 12/33 (36%)

Query: 82  HSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKE 114
           HS  K Y C  C   F  +  +K H      + 
Sbjct: 3   HSGEKPYECYICHARFTQSGTMKMHILQKHTEN 35

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.1 bits (84), Expect = 5e-05
 Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 1/28 (3%)

Query: 86  KRYLCTFCGKGFNDTFDLKRHTR-THTG 112
           K Y+C  CGKGF+    L  H +  HT 
Sbjct: 4   KPYICQSCGKGFSRPDHLNGHIKQVHTS 31

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 31.1 bits (71), Expect = 0.004
 Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 1/32 (3%)

Query: 60 FACHLCSKSFSLQRLLNRHMKC-HSDVKRYLC 90
          + C  C K FS    LN H+K  H+  + + C
Sbjct: 6  YICQSCGKGFSRPDHLNGHIKQVHTSERPHKC 37

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.9 bits (81), Expect = 1e-04
 Identities = 12/26 (46%), Positives = 13/26 (50%)

Query: 86  KRYLCTFCGKGFNDTFDLKRHTRTHT 111
           K Y C  CGK F+    L  H R HT
Sbjct: 1   KPYKCLECGKAFSQNSGLINHQRIHT 26

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.0 bits (81), Expect = 1e-04
 Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 2/28 (7%)

Query: 86  KRYLCTF--CGKGFNDTFDLKRHTRTHT 111
           + Y+C F  C K F  + +LK H  TH 
Sbjct: 1   RPYVCPFDGCNKKFAQSTNLKSHILTHA 28

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.7 bits (80), Expect = 2e-04
 Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 2/29 (6%)

Query: 86  KRYLCTF--CGKGFNDTFDLKRHTRTHTG 112
           K + CTF  CGK F+  F+L+ H R HTG
Sbjct: 1   KPFQCTFEGCGKRFSLDFNLRTHVRIHTG 29

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.9 bits (78), Expect = 3e-04
 Identities = 10/27 (37%), Positives = 13/27 (48%), Gaps = 2/27 (7%)

Query: 88  YLCT--FCGKGFNDTFDLKRHTRTHTG 112
           + C    CGK FN    LK H + H+ 
Sbjct: 2   FSCPEPACGKSFNFKKHLKEHMKLHSD 28

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 31.2 bits (71), Expect = 0.004
 Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 2/35 (5%)

Query: 60 FACH--LCSKSFSLQRLLNRHMKCHSDVKRYLCTF 92
          F+C    C KSF+ ++ L  HMK HSD + Y+C F
Sbjct: 2  FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF 36

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.3 bits (73), Expect = 0.001
 Identities = 12/29 (41%), Positives = 18/29 (62%)

Query: 86  KRYLCTFCGKGFNDTFDLKRHTRTHTGKE 114
           K+  C  CGK F D + L RH  +H+G++
Sbjct: 4   KQVACEICGKIFRDVYHLNRHKLSHSGEK 32

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 31.9 bits (72), Expect = 0.002
 Identities = 12/28 (42%), Positives = 18/28 (64%)

Query: 86  KRYLCTFCGKGFNDTFDLKRHTRTHTGK 113
           + ++C  CGK F ++  LKRH   HTG+
Sbjct: 1   RVHVCAECGKAFVESSKLKRHQLVHTGE 28

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	134
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.8
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.62
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.57
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.56
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.54
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.49
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.48
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.46
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.44
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.43
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.41
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.4
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.39
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.38
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.37
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.31
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.3
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.25
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	99.24
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.24
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	99.23
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.23
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.23
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.19
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.16
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.15
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.08
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.07
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	99.06
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.05
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	99.03
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.02
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.01
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.98
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.97
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.95
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.91
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.89
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.85
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.83
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.82
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.81
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.8
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.74
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.68
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.61
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.53
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.51
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.47
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.42
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	98.42
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.34
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	98.28
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	98.26
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.25
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	98.18
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	98.17
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	98.16
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.16
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	98.08
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	98.07
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	98.0
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.0
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.99
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.91
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.91
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.91
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.91
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.85
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.84
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.77
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.77
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.7
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.68
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	97.67
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.67
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.67
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.59
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.47
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.47
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.45
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.28
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	97.24
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	97.18
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.1
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.06
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.99
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.92
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.85
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.8
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.7
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	96.65
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	96.64
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.6
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.57
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.55
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.4
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	96.35
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.34
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	95.97
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	95.96
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.71
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	95.67
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.46
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.26
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	95.01
d1y0jb1	36	U-shaped transcription factor, different fingers {	94.94
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	94.86
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	94.77
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	94.38
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	93.96
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	93.69
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	93.64
d1y0jb1	36	U-shaped transcription factor, different fingers {	93.63
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	92.87
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	92.69
d1m36a_	33	Monocytic leukemia zinc finger protein Moz {Human	91.93
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	91.2
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	91.18
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	90.02
d2ghfa2	36	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	88.3
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	87.69
d1fu9a_	36	U-shaped transcription factor, different fingers {	87.53
d1wira_	121	Protein arginine N-methyltransferase 3 {Mouse (Mus	84.62
d1wjpa3	41	Zinc finger protein 295, ZNF295 {Human (Homo sapie	84.12
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	83.63
d2czra1	218	TBP-interacting protein {Thermococcus kodakaraensi	83.13

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=3.8e-20  Score=95.02  Aligned_cols=53  Identities=34%  Similarity=0.740  Sum_probs=50.8

Q ss_pred             CCceeccccccccCChHHHHHHHHHcCCCCceecccccccccChhhHHHHHhHh
Q psy691           57 NTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTH  110 (134)
Q Consensus        57 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h  110 (134)
                      +++|.|. ||+.|.....|..|+++|++++||.|..|++.|...+.|.+|+++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            4789995 9999999999999999999999999999999999999999999987

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=5.9e-17  Score=82.84  Aligned_cols=47  Identities=28%  Similarity=0.358  Sum_probs=44.3

Q ss_pred             CCceecccccccccChhhHHHHHhHhcCCCccccccCCCcccCcccee
Q psy691           85 VKRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEEDGKTNVLTTEYLV  132 (134)
Q Consensus        85 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~~~~~~l~  132 (134)
                      +|||.|. ||+.|.....|..|+++|+|++||.|..|++.|.....|.
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~   47 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLV   47 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHH
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHH
Confidence            6899995 9999999999999999999999999999999999988774

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=1e-16  Score=75.89  Aligned_cols=37  Identities=43%  Similarity=0.797  Sum_probs=34.8

Q ss_pred             HHHHHcCCCCceecccccccccChhhHHHHHhHhcCC
Q psy691           77 RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGK  113 (134)
Q Consensus        77 ~H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~  113 (134)
                      +|+++|+++|||.|..|++.|...++|.+|+++|+||
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            4788999999999999999999999999999999997

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=8.5e-16  Score=72.57  Aligned_cols=35  Identities=34%  Similarity=0.686  Sum_probs=23.9

Q ss_pred             CCceecccccccccChhhHHHHHh-HhcCCCccccc
Q psy691           85 VKRYLCTFCGKGFNDTFDLKRHTR-THTGKEEEEEE  119 (134)
Q Consensus        85 ~k~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~c~  119 (134)
                      +|||.|..|++.|...++|.+|++ +|+|||||.|+
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            566777777777777777777754 57777777764

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=1.9e-15  Score=68.76  Aligned_cols=33  Identities=45%  Similarity=0.744  Sum_probs=30.9

Q ss_pred             HcCCCCceecccccccccChhhHHHHHhHhcCC
Q psy691           81 CHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGK  113 (134)
Q Consensus        81 ~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~  113 (134)
                      +|+++|||.|..|+++|...+.|.+|+++|+||
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            489999999999999999999999999999986

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=1.1e-14  Score=68.62  Aligned_cols=37  Identities=30%  Similarity=0.590  Sum_probs=33.9

Q ss_pred             CCCceeccccccccCChHHHHHHHH-HcCCCCceeccc
Q psy691           56 DNTRFACHLCSKSFSLQRLLNRHMK-CHSDVKRYLCTF   92 (134)
Q Consensus        56 ~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~k~~~C~~   92 (134)
                      .++||.|.+||+.|....+|..|++ +|+++|||.|++
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            3679999999999999999999987 699999999974

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=8.9e-15  Score=68.13  Aligned_cols=35  Identities=26%  Similarity=0.497  Sum_probs=32.1

Q ss_pred             HHcCCCCceecccccccccChhhHHHHHhHhcCCC
Q psy691           80 KCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKE  114 (134)
Q Consensus        80 ~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~  114 (134)
                      |+|+|+|||.|..|+++|.+.+.|..|+++|+++.
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~~   35 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN   35 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCCC
Confidence            57999999999999999999999999999998764

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.46  E-value=5.8e-15  Score=69.25  Aligned_cols=35  Identities=20%  Similarity=0.455  Sum_probs=32.4

Q ss_pred             HHHHcCCCCceecccccccccChhhHHHHHhHhcC
Q psy691           78 HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG  112 (134)
Q Consensus        78 H~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~  112 (134)
                      |.|+|+++|||.|..|++.|.++++|.+|+++|.+
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            67889999999999999999999999999999975

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.44  E-value=1.9e-14  Score=63.58  Aligned_cols=29  Identities=34%  Similarity=0.815  Sum_probs=22.2

Q ss_pred             CceecccccccccChhhHHHHHhHhcCCC
Q psy691           86 KRYLCTFCGKGFNDTFDLKRHTRTHTGKE  114 (134)
Q Consensus        86 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~  114 (134)
                      |||.|.+|++.|.+.++|.+|+++|+|||
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            57777777777777777777777777775

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.43  E-value=4e-14  Score=65.11  Aligned_cols=32  Identities=25%  Similarity=0.579  Sum_probs=27.8

Q ss_pred             cCCCCceecccccccccChhhHHHHHhHhcCC
Q psy691           82 HSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGK  113 (134)
Q Consensus        82 h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~  113 (134)
                      |+|+|||.|.+|++.|.+..+|.+|+++|+++
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            67888999999999999999999998888875

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.41  E-value=4e-14  Score=62.43  Aligned_cols=29  Identities=34%  Similarity=0.686  Sum_probs=23.1

Q ss_pred             CceecccccccccChhhHHHHHhHhcCCC
Q psy691           86 KRYLCTFCGKGFNDTFDLKRHTRTHTGKE  114 (134)
Q Consensus        86 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~  114 (134)
                      |||.|.+|++.|.+.++|.+|+++|+|||
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            57888888888888888888888888775

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.40  E-value=6.2e-15  Score=72.60  Aligned_cols=41  Identities=24%  Similarity=0.583  Sum_probs=36.3

Q ss_pred             HHHHHHHHHcCCCCceeccc--ccccccChhhHHHHHhHhcCCC
Q psy691           73 RLLNRHMKCHSDVKRYLCTF--CGKGFNDTFDLKRHTRTHTGKE  114 (134)
Q Consensus        73 ~~l~~H~~~h~~~k~~~C~~--C~~~f~~~~~l~~H~~~h~~~~  114 (134)
                      ..|..|+. |.+++||.|.+  |++.|.+.++|..|+++|+|||
T Consensus         5 ~~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           5 GSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SSGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             chhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            34566775 99999999987  9999999999999999999986

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.39  E-value=6.3e-14  Score=61.17  Aligned_cols=28  Identities=39%  Similarity=0.765  Sum_probs=21.5

Q ss_pred             CCceecccccccccChhhHHHHHhHhcC
Q psy691           85 VKRYLCTFCGKGFNDTFDLKRHTRTHTG  112 (134)
Q Consensus        85 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~  112 (134)
                      +|||.|..|++.|.+.++|.+|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            4677777777777777777777777775

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=8.6e-14  Score=64.62  Aligned_cols=34  Identities=26%  Similarity=0.470  Sum_probs=29.4

Q ss_pred             HHcCCCCceecccccccccChhhHHHHHhHhcCC
Q psy691           80 KCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGK  113 (134)
Q Consensus        80 ~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~  113 (134)
                      |+|+|+|||.|.+|++.|.+.++|.+|++.++++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            4699999999999999999999999998765554

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=1.2e-13  Score=64.04  Aligned_cols=32  Identities=34%  Similarity=0.587  Sum_probs=21.2

Q ss_pred             eeccc--ccccccChhhHHHHHhHhcCCCccccc
Q psy691           88 YLCTF--CGKGFNDTFDLKRHTRTHTGKEEEEEE  119 (134)
Q Consensus        88 ~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~c~  119 (134)
                      |.|.+  |++.|.+...|.+|+++|+|||||.|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            55655  666666666666666666666666664

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=4.5e-13  Score=62.00  Aligned_cols=33  Identities=48%  Similarity=1.077  Sum_probs=31.0

Q ss_pred             eeccc--cccccCChHHHHHHHHHcCCCCceeccc
Q psy691           60 FACHL--CSKSFSLQRLLNRHMKCHSDVKRYLCTF   92 (134)
Q Consensus        60 ~~C~~--C~~~f~~~~~l~~H~~~h~~~k~~~C~~   92 (134)
                      |.|++  |++.|.++.+|++|+++|++++||.|++
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF   36 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCS
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCCC
Confidence            78887  9999999999999999999999999974

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.30  E-value=7.2e-13  Score=58.37  Aligned_cols=29  Identities=34%  Similarity=0.843  Sum_probs=27.6

Q ss_pred             CceeccccccccCChHHHHHHHHHcCCCC
Q psy691           58 TRFACHLCSKSFSLQRLLNRHMKCHSDVK   86 (134)
Q Consensus        58 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   86 (134)
                      +||.|++|++.|.+..+|.+|+++|+|+|
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            58999999999999999999999999986

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.25  E-value=1.8e-12  Score=57.00  Aligned_cols=29  Identities=38%  Similarity=0.745  Sum_probs=27.5

Q ss_pred             CceeccccccccCChHHHHHHHHHcCCCC
Q psy691           58 TRFACHLCSKSFSLQRLLNRHMKCHSDVK   86 (134)
Q Consensus        58 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   86 (134)
                      +||.|.+|++.|..+.+|.+|+++|+++|
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            58999999999999999999999999985

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=1.6e-12  Score=57.48  Aligned_cols=28  Identities=46%  Similarity=0.833  Sum_probs=21.0

Q ss_pred             Cceeccc--ccccccChhhHHHHHhHhcCC
Q psy691           86 KRYLCTF--CGKGFNDTFDLKRHTRTHTGK  113 (134)
Q Consensus        86 k~~~C~~--C~~~f~~~~~l~~H~~~h~~~  113 (134)
                      |||.|.+  |++.|.+.++|.+|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            5677777  777777777777777777775

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=1.5e-12  Score=55.39  Aligned_cols=26  Identities=46%  Similarity=0.814  Sum_probs=18.4

Q ss_pred             CceecccccccccChhhHHHHHhHhc
Q psy691           86 KRYLCTFCGKGFNDTFDLKRHTRTHT  111 (134)
Q Consensus        86 k~~~C~~C~~~f~~~~~l~~H~~~h~  111 (134)
                      |||+|..|||.|.+.+.|.+|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            56777777777777777777777764

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.23  E-value=1.9e-12  Score=57.33  Aligned_cols=28  Identities=54%  Similarity=1.099  Sum_probs=21.8

Q ss_pred             Cceeccc--ccccccChhhHHHHHhHhcCC
Q psy691           86 KRYLCTF--CGKGFNDTFDLKRHTRTHTGK  113 (134)
Q Consensus        86 k~~~C~~--C~~~f~~~~~l~~H~~~h~~~  113 (134)
                      |||.|.+  |++.|.+.++|.+|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            5778876  888888888888888888775

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.23  E-value=2.3e-12  Score=56.07  Aligned_cols=28  Identities=29%  Similarity=0.749  Sum_probs=26.4

Q ss_pred             CCceeccccccccCChHHHHHHHHHcCC
Q psy691           57 NTRFACHLCSKSFSLQRLLNRHMKCHSD   84 (134)
Q Consensus        57 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~   84 (134)
                      ++||.|++|++.|....+|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            4789999999999999999999999986

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.23  E-value=2.2e-12  Score=57.61  Aligned_cols=29  Identities=48%  Similarity=1.096  Sum_probs=22.5

Q ss_pred             Cceeccc--ccccccChhhHHHHHhHhcCCC
Q psy691           86 KRYLCTF--CGKGFNDTFDLKRHTRTHTGKE  114 (134)
Q Consensus        86 k~~~C~~--C~~~f~~~~~l~~H~~~h~~~~  114 (134)
                      |||.|++  |++.|.+.++|.+|+++|+|||
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            5778854  8888888888888888888775

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.19  E-value=7.8e-12  Score=56.52  Aligned_cols=32  Identities=25%  Similarity=0.583  Sum_probs=29.7

Q ss_pred             CCCCCceeccccccccCChHHHHHHHHHcCCC
Q psy691           54 RKDNTRFACHLCSKSFSLQRLLNRHMKCHSDV   85 (134)
Q Consensus        54 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   85 (134)
                      ..+++||.|.+|++.|....+|..|+++|+|+
T Consensus         2 HTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           2 HSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             cCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            45789999999999999999999999999985

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.16  E-value=1.7e-11  Score=57.50  Aligned_cols=35  Identities=29%  Similarity=0.584  Sum_probs=31.8

Q ss_pred             cCCCCCCCceeccccccccCChHHHHHHHHHcCCC
Q psy691           51 TTGRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDV   85 (134)
Q Consensus        51 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   85 (134)
                      .....+++||.|++||+.|....+|..|+++|+|+
T Consensus         4 ~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           4 EWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             CcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            34567889999999999999999999999999986

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.15  E-value=2.1e-11  Score=55.80  Aligned_cols=32  Identities=28%  Similarity=0.672  Sum_probs=29.5

Q ss_pred             CCCCCceeccccccccCChHHHHHHHHHcCCC
Q psy691           54 RKDNTRFACHLCSKSFSLQRLLNRHMKCHSDV   85 (134)
Q Consensus        54 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   85 (134)
                      ..+++||.|.+|++.|..+.+|.+|+++|++.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            45789999999999999999999999999875

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=2.5e-11  Score=51.47  Aligned_cols=26  Identities=31%  Similarity=0.593  Sum_probs=24.5

Q ss_pred             CceeccccccccCChHHHHHHHHHcC
Q psy691           58 TRFACHLCSKSFSLQRLLNRHMKCHS   83 (134)
Q Consensus        58 ~~~~C~~C~~~f~~~~~l~~H~~~h~   83 (134)
                      +||.|.+||+.|....+|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            58999999999999999999999984

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=8.8e-11  Score=54.26  Aligned_cols=33  Identities=30%  Similarity=0.598  Sum_probs=30.1

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCCC
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDV   85 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   85 (134)
                      ...+++||.|.+|++.|....+|..|+++|.++
T Consensus         2 ~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           2 THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            356789999999999999999999999999865

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=5.9e-11  Score=52.33  Aligned_cols=28  Identities=29%  Similarity=0.612  Sum_probs=26.4

Q ss_pred             Cceeccc--cccccCChHHHHHHHHHcCCC
Q psy691           58 TRFACHL--CSKSFSLQRLLNRHMKCHSDV   85 (134)
Q Consensus        58 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~   85 (134)
                      +||.|++  |++.|.+..+|++|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            5799999  999999999999999999986

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.05  E-value=3.4e-11  Score=52.67  Aligned_cols=27  Identities=44%  Similarity=0.966  Sum_probs=21.4

Q ss_pred             Cceeccc--ccccccChhhHHHHHhHhcC
Q psy691           86 KRYLCTF--CGKGFNDTFDLKRHTRTHTG  112 (134)
Q Consensus        86 k~~~C~~--C~~~f~~~~~l~~H~~~h~~  112 (134)
                      |||.|.+  |++.|.+.++|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            5788876  88888888888888888876

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=6e-11  Score=52.37  Aligned_cols=28  Identities=36%  Similarity=0.714  Sum_probs=26.2

Q ss_pred             Cceeccc--cccccCChHHHHHHHHHcCCC
Q psy691           58 TRFACHL--CSKSFSLQRLLNRHMKCHSDV   85 (134)
Q Consensus        58 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~   85 (134)
                      +||.|++  |++.|.+..+|.+|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            5899988  999999999999999999985

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.02  E-value=8.1e-11  Score=52.65  Aligned_cols=28  Identities=36%  Similarity=0.750  Sum_probs=20.5

Q ss_pred             CCceeccc--ccccccChhhHHHHHhHhcC
Q psy691           85 VKRYLCTF--CGKGFNDTFDLKRHTRTHTG  112 (134)
Q Consensus        85 ~k~~~C~~--C~~~f~~~~~l~~H~~~h~~  112 (134)
                      +|||.|.+  |++.|.+.++|.+|+++|+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            46777776  77777777777777777765

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.01  E-value=9.5e-11  Score=52.14  Aligned_cols=29  Identities=34%  Similarity=0.679  Sum_probs=26.5

Q ss_pred             Cceeccc--cccccCChHHHHHHHHHcCCCC
Q psy691           58 TRFACHL--CSKSFSLQRLLNRHMKCHSDVK   86 (134)
Q Consensus        58 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~k   86 (134)
                      +||.|++  |++.|.+..+|.+|+++|+++|
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            4799965  9999999999999999999985

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.98  E-value=2.9e-10  Score=52.82  Aligned_cols=34  Identities=35%  Similarity=0.470  Sum_probs=30.7

Q ss_pred             cCCCCCCCceeccccccccCChHHHHHHHHHcCC
Q psy691           51 TTGRKDNTRFACHLCSKSFSLQRLLNRHMKCHSD   84 (134)
Q Consensus        51 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   84 (134)
                      .....+++||.|.+|++.|..+.+|..|+++|.+
T Consensus         3 ~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           3 TRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             SSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            3566789999999999999999999999999975

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.97  E-value=9.6e-11  Score=57.29  Aligned_cols=36  Identities=19%  Similarity=0.502  Sum_probs=32.1

Q ss_pred             cCCCCCCCceeccc--cccccCChHHHHHHHHHcCCCC
Q psy691           51 TTGRKDNTRFACHL--CSKSFSLQRLLNRHMKCHSDVK   86 (134)
Q Consensus        51 ~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~k   86 (134)
                      .....++++|.|.+  |++.|.+..+|..|+++|+++|
T Consensus        10 h~~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_          10 YVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hhhccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            33467889999988  9999999999999999999985

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=1.2e-10  Score=50.33  Aligned_cols=26  Identities=42%  Similarity=0.927  Sum_probs=19.7

Q ss_pred             Cceeccc--ccccccChhhHHHHHhHhc
Q psy691           86 KRYLCTF--CGKGFNDTFDLKRHTRTHT  111 (134)
Q Consensus        86 k~~~C~~--C~~~f~~~~~l~~H~~~h~  111 (134)
                      |||.|.+  |+|+|.+.++|.+|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            5777776  7777777777777777775

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.91  E-value=8.8e-10  Score=50.73  Aligned_cols=32  Identities=13%  Similarity=0.405  Sum_probs=27.7

Q ss_pred             CCCCCCceeccccccccCChHHHHHHHHHcCC
Q psy691           53 GRKDNTRFACHLCSKSFSLQRLLNRHMKCHSD   84 (134)
Q Consensus        53 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   84 (134)
                      ...+++||.|++|++.|..+.+|+.|++.+++
T Consensus         2 ~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~   33 (36)
T d2ct1a2           2 THSGEKPYECYICHARFTQSGTMKMHILQKHT   33 (36)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHHHHSS
T ss_pred             ccCCCCCEeCCCCcccccchHHHHHHcccccC
Confidence            35688999999999999999999999876443

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.89  E-value=4e-10  Score=45.60  Aligned_cols=25  Identities=48%  Similarity=0.825  Sum_probs=13.2

Q ss_pred             eecccccccccChhhHHHHHhHhcC
Q psy691           88 YLCTFCGKGFNDTFDLKRHTRTHTG  112 (134)
Q Consensus        88 ~~C~~C~~~f~~~~~l~~H~~~h~~  112 (134)
                      ++|++|++.|++++.|..|++.|+|
T Consensus         2 hkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           2 HKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CccchhhhHhcchhHHHHHhhccCC
Confidence            4455555555555555555555543

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.85  E-value=9.4e-10  Score=47.66  Aligned_cols=31  Identities=39%  Similarity=0.831  Sum_probs=20.8

Q ss_pred             CceecccccccccChhhHHHHHhHhcCCCcc
Q psy691           86 KRYLCTFCGKGFNDTFDLKRHTRTHTGKEEE  116 (134)
Q Consensus        86 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  116 (134)
                      +...|+.||+.|....+|.+|...|++||||
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            3456666777777666777776667777666

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.83  E-value=9.2e-10  Score=44.50  Aligned_cols=26  Identities=38%  Similarity=0.901  Sum_probs=24.2

Q ss_pred             ceeccccccccCChHHHHHHHHHcCC
Q psy691           59 RFACHLCSKSFSLQRLLNRHMKCHSD   84 (134)
Q Consensus        59 ~~~C~~C~~~f~~~~~l~~H~~~h~~   84 (134)
                      |++|+.|++.|+++..|+.|++.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            47899999999999999999999985

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.82  E-value=1.5e-09  Score=48.44  Aligned_cols=29  Identities=31%  Similarity=0.641  Sum_probs=26.4

Q ss_pred             CCceeccc--cccccCChHHHHHHHHHcCCC
Q psy691           57 NTRFACHL--CSKSFSLQRLLNRHMKCHSDV   85 (134)
Q Consensus        57 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~   85 (134)
                      ++||.|.+  |++.|.+..+|.+|+++|+..
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            47899998  999999999999999999753

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.81  E-value=7.4e-10  Score=48.28  Aligned_cols=27  Identities=33%  Similarity=0.773  Sum_probs=25.2

Q ss_pred             Cceeccc--cccccCChHHHHHHHHHcCC
Q psy691           58 TRFACHL--CSKSFSLQRLLNRHMKCHSD   84 (134)
Q Consensus        58 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~   84 (134)
                      +||.|.+  |++.|.+..+|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            5899988  99999999999999999975

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.80  E-value=1.6e-09  Score=45.20  Aligned_cols=27  Identities=37%  Similarity=0.785  Sum_probs=22.6

Q ss_pred             CCceecccccccccChhhHHHHHhHhc
Q psy691           85 VKRYLCTFCGKGFNDTFDLKRHTRTHT  111 (134)
Q Consensus        85 ~k~~~C~~C~~~f~~~~~l~~H~~~h~  111 (134)
                      ++||.|.+||+.|.+.+...+|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            578888888888888888888888874

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.74  E-value=1.4e-09  Score=46.93  Aligned_cols=26  Identities=27%  Similarity=0.683  Sum_probs=24.3

Q ss_pred             Cceeccc--cccccCChHHHHHHHHHcC
Q psy691           58 TRFACHL--CSKSFSLQRLLNRHMKCHS   83 (134)
Q Consensus        58 ~~~~C~~--C~~~f~~~~~l~~H~~~h~   83 (134)
                      +||.|++  |++.|.+..+|++|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            5799998  9999999999999999985

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.68  E-value=8.1e-09  Score=44.66  Aligned_cols=32  Identities=41%  Similarity=0.617  Sum_probs=29.4

Q ss_pred             CceeccccccccCChHHHHHHHHHcCCCCcee
Q psy691           58 TRFACHLCSKSFSLQRLLNRHMKCHSDVKRYL   89 (134)
Q Consensus        58 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~   89 (134)
                      +...|..||+.|....+|.+|..+|.++|||.
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCCC
Confidence            45789999999999999999999999999983

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.61  E-value=1.7e-08  Score=42.69  Aligned_cols=27  Identities=19%  Similarity=0.618  Sum_probs=18.6

Q ss_pred             CceeccccccccCChHHHHHHHHHcCC
Q psy691           58 TRFACHLCSKSFSLQRLLNRHMKCHSD   84 (134)
Q Consensus        58 ~~~~C~~C~~~f~~~~~l~~H~~~h~~   84 (134)
                      +||.|++|+..|+++..+..|.++|.|
T Consensus         2 kp~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           2 KPYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CCcccchHHHHhhccccceEeeecccC
Confidence            566777777777777777777776655

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.53  E-value=2.6e-08  Score=42.06  Aligned_cols=29  Identities=34%  Similarity=0.708  Sum_probs=26.9

Q ss_pred             CCceecccccccccChhhHHHHHhHhcCC
Q psy691           85 VKRYLCTFCGKGFNDTFDLKRHTRTHTGK  113 (134)
Q Consensus        85 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~  113 (134)
                      ++||.|++|..+|.+++-+..|.+.|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            58999999999999999999999999773

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.51  E-value=5e-08  Score=40.58  Aligned_cols=27  Identities=33%  Similarity=0.699  Sum_probs=25.1

Q ss_pred             CCceeccccccccCChHHHHHHHHHcC
Q psy691           57 NTRFACHLCSKSFSLQRLLNRHMKCHS   83 (134)
Q Consensus        57 ~~~~~C~~C~~~f~~~~~l~~H~~~h~   83 (134)
                      ++||.|.+||+.|.+....++|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            478999999999999999999999985

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.47  E-value=5.5e-08  Score=39.97  Aligned_cols=26  Identities=46%  Similarity=0.875  Sum_probs=17.1

Q ss_pred             eecccccccccChhhHHHHHhHhcCC
Q psy691           88 YLCTFCGKGFNDTFDLKRHTRTHTGK  113 (134)
Q Consensus        88 ~~C~~C~~~f~~~~~l~~H~~~h~~~  113 (134)
                      +.|..|||.|...+.|++|+.+|+||
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccCC
Confidence            45666666666666666666666664

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.42  E-value=7.4e-08  Score=39.77  Aligned_cols=28  Identities=29%  Similarity=0.609  Sum_probs=17.9

Q ss_pred             CCceecccccccccChhhHHHHHhHhcC
Q psy691           85 VKRYLCTFCGKGFNDTFDLKRHTRTHTG  112 (134)
Q Consensus        85 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~  112 (134)
                      ++||+|.+|...-...+.|..|.+.|+|
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CCcceeeecccccCCchheEEeeecccC
Confidence            3566666666666666666666666665

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.42  E-value=9e-08  Score=39.69  Aligned_cols=27  Identities=41%  Similarity=0.694  Sum_probs=15.8

Q ss_pred             eecccccccccChhhHHHHHhHhcCCC
Q psy691           88 YLCTFCGKGFNDTFDLKRHTRTHTGKE  114 (134)
Q Consensus        88 ~~C~~C~~~f~~~~~l~~H~~~h~~~~  114 (134)
                      |.|..|+......+-|+.|++.|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            455566655556666666666665553

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.34  E-value=1.5e-07  Score=39.63  Aligned_cols=27  Identities=37%  Similarity=0.877  Sum_probs=19.2

Q ss_pred             Cceeccc--ccccccChhhHHHHHhHhcC
Q psy691           86 KRYLCTF--CGKGFNDTFDLKRHTRTHTG  112 (134)
Q Consensus        86 k~~~C~~--C~~~f~~~~~l~~H~~~h~~  112 (134)
                      |||.|.+  |++++...++|+.|++.++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            4677766  77777777777777776554

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.28  E-value=4.6e-07  Score=37.51  Aligned_cols=28  Identities=25%  Similarity=0.718  Sum_probs=25.8

Q ss_pred             ceeccccccccCChHHHHHHHHHcCCCC
Q psy691           59 RFACHLCSKSFSLQRLLNRHMKCHSDVK   86 (134)
Q Consensus        59 ~~~C~~C~~~f~~~~~l~~H~~~h~~~k   86 (134)
                      .|.|++|+......+.|+.|+++|++++
T Consensus         1 kYvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           1 KYICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             CccccccCcccCCHHHHHHHHHHhcCCC
Confidence            3889999999999999999999999874

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.26  E-value=3.2e-07  Score=37.09  Aligned_cols=25  Identities=44%  Similarity=0.780  Sum_probs=13.0

Q ss_pred             ecccccccccChhhHHHHHhHhcCC
Q psy691           89 LCTFCGKGFNDTFDLKRHTRTHTGK  113 (134)
Q Consensus        89 ~C~~C~~~f~~~~~l~~H~~~h~~~  113 (134)
                      +|+.|.+.|..+..|..|-+.|+||
T Consensus         2 qcp~c~k~f~skyylkvhnr~htge   26 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGE   26 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSC
T ss_pred             cCcchHHHHHHhHhhhhccccccCC
Confidence            3455555555555555555555554

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.25  E-value=3.7e-07  Score=37.43  Aligned_cols=27  Identities=30%  Similarity=0.511  Sum_probs=24.7

Q ss_pred             ceeccccccccCChHHHHHHHHHcCCC
Q psy691           59 RFACHLCSKSFSLQRLLNRHMKCHSDV   85 (134)
Q Consensus        59 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   85 (134)
                      -+.|.+||+.|.....|++|+..|+++
T Consensus         2 ~hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           2 VHVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             cchHHHHhHHHHHHHHHHHHhhcccCC
Confidence            368999999999999999999999875

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.18  E-value=5.9e-07  Score=40.87  Aligned_cols=27  Identities=30%  Similarity=0.608  Sum_probs=23.1

Q ss_pred             CCCCceecccccccccChhhHHHHHhH
Q psy691           83 SDVKRYLCTFCGKGFNDTFDLKRHTRT  109 (134)
Q Consensus        83 ~~~k~~~C~~C~~~f~~~~~l~~H~~~  109 (134)
                      +|.|||.|..|+|.|.+++++.+|...
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~~   27 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVTS   27 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhhh
Confidence            467899999999999999999988653

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.17  E-value=8.9e-07  Score=35.75  Aligned_cols=26  Identities=31%  Similarity=0.534  Sum_probs=24.4

Q ss_pred             eccccccccCChHHHHHHHHHcCCCC
Q psy691           61 ACHLCSKSFSLQRLLNRHMKCHSDVK   86 (134)
Q Consensus        61 ~C~~C~~~f~~~~~l~~H~~~h~~~k   86 (134)
                      .|+.|.+.|.++..|+.|-+.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            69999999999999999999999975

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.16  E-value=1e-06  Score=39.81  Aligned_cols=29  Identities=24%  Similarity=0.663  Sum_probs=23.8

Q ss_pred             CceeccccccccCChHHHHHHHHHcCCCC
Q psy691           58 TRFACHLCSKSFSLQRLLNRHMKCHSDVK   86 (134)
Q Consensus        58 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   86 (134)
                      +.|.|.+|++.|.+...|-.||+.|..++
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CccCCCCCCCccCCcccccchHhhhcchH
Confidence            46889899999988888888988886554

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.16  E-value=8.9e-07  Score=36.46  Aligned_cols=29  Identities=21%  Similarity=0.506  Sum_probs=26.4

Q ss_pred             CCceeccccccccCChHHHHHHHHHcCCC
Q psy691           57 NTRFACHLCSKSFSLQRLLNRHMKCHSDV   85 (134)
Q Consensus        57 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   85 (134)
                      ++||+|..|.......+.|..|++.|+|.
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            46899999999999999999999999874

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=98.08  E-value=1.2e-06  Score=36.36  Aligned_cols=28  Identities=46%  Similarity=0.871  Sum_probs=19.6

Q ss_pred             Cceeccc--ccccccChhhHHHHHhHhcCC
Q psy691           86 KRYLCTF--CGKGFNDTFDLKRHTRTHTGK  113 (134)
Q Consensus        86 k~~~C~~--C~~~f~~~~~l~~H~~~h~~~  113 (134)
                      +||.|..  |.|.|....+|.+|..+|+||
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            4666665  777777777777777777764

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=98.07  E-value=1.2e-06  Score=34.81  Aligned_cols=23  Identities=39%  Similarity=0.897  Sum_probs=14.7

Q ss_pred             eecccccccccChhhHHHHHhHh
Q psy691           88 YLCTFCGKGFNDTFDLKRHTRTH  110 (134)
Q Consensus        88 ~~C~~C~~~f~~~~~l~~H~~~h  110 (134)
                      |+|..|.++|..++.|.+|+++|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            45666666666666666666665

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.00  E-value=4.2e-06  Score=34.55  Aligned_cols=27  Identities=30%  Similarity=0.632  Sum_probs=18.0

Q ss_pred             ceeccccccccCChHHHHHHHHHcCCC
Q psy691           59 RFACHLCSKSFSLQRLLNRHMKCHSDV   85 (134)
Q Consensus        59 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   85 (134)
                      .|.|..|...|.+.-.|+.||-+|+|+
T Consensus         4 vftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           4 VFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             eEEeHHHHHHHHHHHhheeeeecccCC
Confidence            466777777777666677676666653

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.00  E-value=1.3e-06  Score=37.07  Aligned_cols=28  Identities=39%  Similarity=0.890  Sum_probs=23.0

Q ss_pred             Cceeccc--ccccccChhhHHHHH-hHhcCC
Q psy691           86 KRYLCTF--CGKGFNDTFDLKRHT-RTHTGK  113 (134)
Q Consensus        86 k~~~C~~--C~~~f~~~~~l~~H~-~~h~~~  113 (134)
                      |||.|.+  |.|.|...+....|+ |+|..|
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~e   31 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSNE   31 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCSC
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccCC
Confidence            5888887  999999998888887 777654

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.99  E-value=2.5e-06  Score=35.43  Aligned_cols=24  Identities=38%  Similarity=0.726  Sum_probs=14.9

Q ss_pred             CceecccccccccChhhHHHHHhH
Q psy691           86 KRYLCTFCGKGFNDTFDLKRHTRT  109 (134)
Q Consensus        86 k~~~C~~C~~~f~~~~~l~~H~~~  109 (134)
                      +||.|..|.......++|..|+++
T Consensus         1 kpy~cqyc~yrsadssnlkthikt   24 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKT   24 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHH
T ss_pred             CCccccccccccccchhhhhhhhc
Confidence            456666666666666666666665

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.91  E-value=4e-06  Score=34.54  Aligned_cols=25  Identities=40%  Similarity=0.729  Sum_probs=19.4

Q ss_pred             Cceeccc--ccccccChhhHHHHHhHh
Q psy691           86 KRYLCTF--CGKGFNDTFDLKRHTRTH  110 (134)
Q Consensus        86 k~~~C~~--C~~~f~~~~~l~~H~~~h  110 (134)
                      .||.|..  |++.|...+-|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            4677765  888888888888887776

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.91  E-value=6.3e-06  Score=34.57  Aligned_cols=27  Identities=26%  Similarity=0.640  Sum_probs=24.1

Q ss_pred             Cceeccc--cccccCChHHHHHHHHHcCC
Q psy691           58 TRFACHL--CSKSFSLQRLLNRHMKCHSD   84 (134)
Q Consensus        58 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~   84 (134)
                      +||.|.+  |++.++..+.|+.|++.++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            4799998  99999999999999998654

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.91  E-value=2.8e-06  Score=36.01  Aligned_cols=26  Identities=35%  Similarity=0.763  Sum_probs=17.0

Q ss_pred             ceecccccccccChhhHHHHHhH-hcC
Q psy691           87 RYLCTFCGKGFNDTFDLKRHTRT-HTG  112 (134)
Q Consensus        87 ~~~C~~C~~~f~~~~~l~~H~~~-h~~  112 (134)
                      ||.|.+|++.|.+++-|.+|+.. |.|
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            56777777777777777777544 443

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.91  E-value=4e-06  Score=34.16  Aligned_cols=25  Identities=36%  Similarity=0.680  Sum_probs=13.7

Q ss_pred             CceecccccccccChhhHHHHHhHh
Q psy691           86 KRYLCTFCGKGFNDTFDLKRHTRTH  110 (134)
Q Consensus        86 k~~~C~~C~~~f~~~~~l~~H~~~h  110 (134)
                      +||+|..|...-...++|..|+|+|
T Consensus         2 kp~kck~cdyaaadsssl~kh~rih   26 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIH   26 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHS
T ss_pred             CCcccccccchhcchhhHhhhhhcc
Confidence            4555555555555555555555555

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.85  E-value=9e-06  Score=33.51  Aligned_cols=29  Identities=28%  Similarity=0.712  Sum_probs=26.7

Q ss_pred             CCceecccccccccChhhHHHHHhHhcCC
Q psy691           85 VKRYLCTFCGKGFNDTFDLKRHTRTHTGK  113 (134)
Q Consensus        85 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~  113 (134)
                      +.-|.|..|...|.++-.|+-|+..|+||
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            45689999999999999999999999986

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.84  E-value=5.4e-06  Score=32.87  Aligned_cols=24  Identities=38%  Similarity=0.862  Sum_probs=22.3

Q ss_pred             eeccccccccCChHHHHHHHHHcC
Q psy691           60 FACHLCSKSFSLQRLLNRHMKCHS   83 (134)
Q Consensus        60 ~~C~~C~~~f~~~~~l~~H~~~h~   83 (134)
                      |+|..|.+.|..++.|.+|++.|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            689999999999999999999884

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.77  E-value=8.3e-06  Score=34.51  Aligned_cols=26  Identities=38%  Similarity=0.827  Sum_probs=22.9

Q ss_pred             ceeccccccccCChHHHHHHHHH-cCC
Q psy691           59 RFACHLCSKSFSLQRLLNRHMKC-HSD   84 (134)
Q Consensus        59 ~~~C~~C~~~f~~~~~l~~H~~~-h~~   84 (134)
                      ||.|.+|++.|.+++.|.+|.+. |.+
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            69999999999999999999875 654

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.77  E-value=7.4e-06  Score=33.89  Aligned_cols=28  Identities=32%  Similarity=0.614  Sum_probs=24.9

Q ss_pred             Cceeccc--cccccCChHHHHHHHHHcCCC
Q psy691           58 TRFACHL--CSKSFSLQRLLNRHMKCHSDV   85 (134)
Q Consensus        58 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~   85 (134)
                      +||.|.+  |.+.|.+-.+|.+|..+|+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            4788887  999999999999999999875

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.70  E-value=1.4e-05  Score=33.04  Aligned_cols=27  Identities=19%  Similarity=0.627  Sum_probs=19.7

Q ss_pred             CceecccccccccChhhHHHHHhHhcC
Q psy691           86 KRYLCTFCGKGFNDTFDLKRHTRTHTG  112 (134)
Q Consensus        86 k~~~C~~C~~~f~~~~~l~~H~~~h~~  112 (134)
                      +||+|.+|...-.+.++|..|++.-++
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            477888887777777888888776444

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.68  E-value=1.6e-05  Score=35.79  Aligned_cols=30  Identities=27%  Similarity=0.648  Sum_probs=27.0

Q ss_pred             CCceecccccccccChhhHHHHHhHhcCCC
Q psy691           85 VKRYLCTFCGKGFNDTFDLKRHTRTHTGKE  114 (134)
Q Consensus        85 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~  114 (134)
                      .+.|.|.+|++.|..-..|--|++.|..++
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CCccCCCCCCCccCCcccccchHhhhcchH
Confidence            467999999999999999999999997765

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.67  E-value=1.8e-05  Score=35.39  Aligned_cols=28  Identities=39%  Similarity=0.753  Sum_probs=18.5

Q ss_pred             CCCceeccc--ccccccChhhHHHHHhHhc
Q psy691           84 DVKRYLCTF--CGKGFNDTFDLKRHTRTHT  111 (134)
Q Consensus        84 ~~k~~~C~~--C~~~f~~~~~l~~H~~~h~  111 (134)
                      .+|||.|..  |+.+|...+.|..|+..|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            356777743  7777777777777766653

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.67  E-value=2.5e-05  Score=32.36  Aligned_cols=26  Identities=19%  Similarity=0.427  Sum_probs=23.2

Q ss_pred             CceeccccccccCChHHHHHHHHHcC
Q psy691           58 TRFACHLCSKSFSLQRLLNRHMKCHS   83 (134)
Q Consensus        58 ~~~~C~~C~~~f~~~~~l~~H~~~h~   83 (134)
                      +||.|..|.......++|+.|+.+.+
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkh   26 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred             CCccccccccccccchhhhhhhhccc
Confidence            47999999999999999999999843

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.67  E-value=2.8e-05  Score=31.60  Aligned_cols=26  Identities=27%  Similarity=0.609  Sum_probs=24.4

Q ss_pred             CceeccccccccCChHHHHHHHHHcC
Q psy691           58 TRFACHLCSKSFSLQRLLNRHMKCHS   83 (134)
Q Consensus        58 ~~~~C~~C~~~f~~~~~l~~H~~~h~   83 (134)
                      +||+|..|...-...+.|..|+|+|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            68999999999999999999999985

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.59  E-value=3.3e-05  Score=31.82  Aligned_cols=23  Identities=35%  Similarity=0.725  Sum_probs=13.9

Q ss_pred             ceeccccccccCChHHHHHHHHH
Q psy691           59 RFACHLCSKSFSLQRLLNRHMKC   81 (134)
Q Consensus        59 ~~~C~~C~~~f~~~~~l~~H~~~   81 (134)
                      ||.|..|.-.|..+.+|..||++
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            35566666666666666666654

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.47  E-value=3.7e-05  Score=31.68  Aligned_cols=24  Identities=29%  Similarity=0.764  Sum_probs=22.3

Q ss_pred             ceecccccccccChhhHHHHHhHh
Q psy691           87 RYLCTFCGKGFNDTFDLKRHTRTH  110 (134)
Q Consensus        87 ~~~C~~C~~~f~~~~~l~~H~~~h  110 (134)
                      ||.|..|...|..+.+|..||+..
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSS
T ss_pred             CcccceeeeeEeeccchhHhhhhh
Confidence            799999999999999999999863

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.47  E-value=3.3e-05  Score=33.74  Aligned_cols=19  Identities=37%  Similarity=0.653  Sum_probs=12.1

Q ss_pred             ccccChhhHHHHHhHhcCC
Q psy691           95 KGFNDTFDLKRHTRTHTGK  113 (134)
Q Consensus        95 ~~f~~~~~l~~H~~~h~~~  113 (134)
                      +.|.....|..|+|.||||
T Consensus        15 ~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          15 RPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CCCSSHHHHHHHTHHHHCC
T ss_pred             CcchhHHHHHHHHhhcCCC
Confidence            4566666666666666664

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.45  E-value=6.6e-05  Score=30.79  Aligned_cols=25  Identities=44%  Similarity=0.796  Sum_probs=22.6

Q ss_pred             Cceeccc--cccccCChHHHHHHHHHc
Q psy691           58 TRFACHL--CSKSFSLQRLLNRHMKCH   82 (134)
Q Consensus        58 ~~~~C~~--C~~~f~~~~~l~~H~~~h   82 (134)
                      .||.|+.  |++.|...+.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            4789987  999999999999999887

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.28  E-value=0.00013  Score=32.99  Aligned_cols=25  Identities=24%  Similarity=0.697  Sum_probs=22.3

Q ss_pred             CCCceeccccccccCChHHHHHHHH
Q psy691           56 DNTRFACHLCSKSFSLQRLLNRHMK   80 (134)
Q Consensus        56 ~~~~~~C~~C~~~f~~~~~l~~H~~   80 (134)
                      +-+||.|.+|+|.|-..+.+.+|..
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHhhh
Confidence            3578999999999999999999965

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=97.24  E-value=0.00015  Score=28.68  Aligned_cols=22  Identities=27%  Similarity=0.709  Sum_probs=17.0

Q ss_pred             eeccccccccCChHHHHHHHHH
Q psy691           60 FACHLCSKSFSLQRLLNRHMKC   81 (134)
Q Consensus        60 ~~C~~C~~~f~~~~~l~~H~~~   81 (134)
                      |.|+.|-+.|+++.++..|.+.
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            6788888888888888877764

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.18  E-value=0.00021  Score=31.78  Aligned_cols=28  Identities=29%  Similarity=0.600  Sum_probs=24.5

Q ss_pred             CCCceeccc--cccccCChHHHHHHHHHcC
Q psy691           56 DNTRFACHL--CSKSFSLQRLLNRHMKCHS   83 (134)
Q Consensus        56 ~~~~~~C~~--C~~~f~~~~~l~~H~~~h~   83 (134)
                      .++||.|..  |+..|.....|..|...|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            378999965  9999999999999988774

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.10  E-value=0.00015  Score=28.58  Aligned_cols=22  Identities=32%  Similarity=0.650  Sum_probs=16.2

Q ss_pred             ceecccccccccChhhHHHHHh
Q psy691           87 RYLCTFCGKGFNDTFDLKRHTR  108 (134)
Q Consensus        87 ~~~C~~C~~~f~~~~~l~~H~~  108 (134)
                      ||+|..|...|..+..|+.|+-
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            6777777777777777777754

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.06  E-value=0.00025  Score=27.93  Aligned_cols=22  Identities=32%  Similarity=0.686  Sum_probs=20.5

Q ss_pred             ceeccccccccCChHHHHHHHH
Q psy691           59 RFACHLCSKSFSLQRLLNRHMK   80 (134)
Q Consensus        59 ~~~C~~C~~~f~~~~~l~~H~~   80 (134)
                      ||+|.-|...|-.+..|+.||-
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            6999999999999999999985

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.99  E-value=0.00025  Score=28.59  Aligned_cols=21  Identities=29%  Similarity=0.540  Sum_probs=12.2

Q ss_pred             ceeccccccccCChHHHHHHH
Q psy691           59 RFACHLCSKSFSLQRLLNRHM   79 (134)
Q Consensus        59 ~~~C~~C~~~f~~~~~l~~H~   79 (134)
                      ||.|..||+.+.++.+|..|.
T Consensus         1 pf~c~kcgkcyfrkenllehe   21 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHE   21 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHH
Confidence            355666666666666665553

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.92  E-value=0.00016  Score=30.43  Aligned_cols=27  Identities=33%  Similarity=0.632  Sum_probs=23.3

Q ss_pred             Cceeccc--cccccCChHHHHHHH-HHcCC
Q psy691           58 TRFACHL--CSKSFSLQRLLNRHM-KCHSD   84 (134)
Q Consensus        58 ~~~~C~~--C~~~f~~~~~l~~H~-~~h~~   84 (134)
                      +||.|.+  |.|.|...+.-..|+ |+|..
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccC
Confidence            5799998  999999999888997 77864

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.85  E-value=0.00032  Score=28.26  Aligned_cols=23  Identities=26%  Similarity=0.530  Sum_probs=20.3

Q ss_pred             ceecccccccccChhhHHHHHhH
Q psy691           87 RYLCTFCGKGFNDTFDLKRHTRT  109 (134)
Q Consensus        87 ~~~C~~C~~~f~~~~~l~~H~~~  109 (134)
                      ||+|..||+.+-++.+|..|...
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            68999999999999999998653

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.80  E-value=0.00051  Score=28.65  Aligned_cols=28  Identities=46%  Similarity=1.147  Sum_probs=20.4

Q ss_pred             Cceeccc--ccccccChhhHHHHHhHhcCC
Q psy691           86 KRYLCTF--CGKGFNDTFDLKRHTRTHTGK  113 (134)
Q Consensus        86 k~~~C~~--C~~~f~~~~~l~~H~~~h~~~  113 (134)
                      +.|.|.+  |+..|.....|..|.-.|+||
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            4577765  777777777777777777775

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.70  E-value=0.0007  Score=27.80  Aligned_cols=24  Identities=33%  Similarity=0.560  Sum_probs=21.9

Q ss_pred             CceeccccccccCChHHHHHHHHH
Q psy691           58 TRFACHLCSKSFSLQRLLNRHMKC   81 (134)
Q Consensus        58 ~~~~C~~C~~~f~~~~~l~~H~~~   81 (134)
                      +||+|..|.--.+..++|..|++.
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk   24 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKK   24 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHHH
Confidence            479999999999999999999976

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.65  E-value=0.0011  Score=28.50  Aligned_cols=26  Identities=27%  Similarity=0.644  Sum_probs=20.2

Q ss_pred             ceeccccccccCChHHHHHHHHHcCC
Q psy691           59 RFACHLCSKSFSLQRLLNRHMKCHSD   84 (134)
Q Consensus        59 ~~~C~~C~~~f~~~~~l~~H~~~h~~   84 (134)
                      .|.|..|++.|+++..+.+|-..-.|
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            47888888888888888888765544

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.64  E-value=0.00079  Score=26.52  Aligned_cols=22  Identities=32%  Similarity=0.730  Sum_probs=20.7

Q ss_pred             eecccccccccChhhHHHHHhH
Q psy691           88 YLCTFCGKGFNDTFDLKRHTRT  109 (134)
Q Consensus        88 ~~C~~C~~~f~~~~~l~~H~~~  109 (134)
                      |.|++|-+.|.+++++..|.++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            7899999999999999999886

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.60  E-value=0.0011  Score=31.00  Aligned_cols=25  Identities=32%  Similarity=0.566  Sum_probs=19.9

Q ss_pred             CceeccccccccCChHHHHHHHHHc
Q psy691           58 TRFACHLCSKSFSLQRLLNRHMKCH   82 (134)
Q Consensus        58 ~~~~C~~C~~~f~~~~~l~~H~~~h   82 (134)
                      ..|.|..|+|.|+....|+.|...|
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQH   29 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQH   29 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHH
T ss_pred             ceeeccccccccCCHHHHhHhHHhc
Confidence            4578888888888888888887766

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.57  E-value=0.00048  Score=29.90  Aligned_cols=21  Identities=29%  Similarity=0.381  Sum_probs=18.2

Q ss_pred             cccccCChHHHHHHHHHcCCC
Q psy691           65 CSKSFSLQRLLNRHMKCHSDV   85 (134)
Q Consensus        65 C~~~f~~~~~l~~H~~~h~~~   85 (134)
                      -++.|.....|..|+|.|+|+
T Consensus        13 ~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          13 ELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCcchhHHHHHHHHhhcCCC
Confidence            346799999999999999985

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.55  E-value=0.0012  Score=26.71  Aligned_cols=22  Identities=36%  Similarity=0.522  Sum_probs=11.4

Q ss_pred             eccccccccCChHHHHHHHHHc
Q psy691           61 ACHLCSKSFSLQRLLNRHMKCH   82 (134)
Q Consensus        61 ~C~~C~~~f~~~~~l~~H~~~h   82 (134)
                      +|++|.+...++..|+.|.|+|
T Consensus         4 kc~ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           4 KCSECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             ECSSSSCEESSHHHHHHHHGGG
T ss_pred             cCcccccccCcHHHHHHhhccc
Confidence            4555555555555555555544

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.40  E-value=0.001  Score=26.64  Aligned_cols=19  Identities=47%  Similarity=0.800  Sum_probs=12.6

Q ss_pred             ccccccChhhHHHHHhHhc
Q psy691           93 CGKGFNDTFDLKRHTRTHT  111 (134)
Q Consensus        93 C~~~f~~~~~l~~H~~~h~  111 (134)
                      |++.|..-..|..|+.+|+
T Consensus         9 c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           9 CGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             CCCEESSHHHHHHHHHHHH
T ss_pred             chHHHhhccceEEEeeccc
Confidence            6666666666666666654

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.35  E-value=0.0012  Score=28.32  Aligned_cols=26  Identities=31%  Similarity=0.768  Sum_probs=23.3

Q ss_pred             ceecccccccccChhhHHHHHhHhcC
Q psy691           87 RYLCTFCGKGFNDTFDLKRHTRTHTG  112 (134)
Q Consensus        87 ~~~C~~C~~~f~~~~~l~~H~~~h~~  112 (134)
                      .|.|..|+|.|.++..+.+|-...+|
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            48999999999999999999877666

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.34  E-value=0.0019  Score=26.09  Aligned_cols=26  Identities=23%  Similarity=0.391  Sum_probs=23.5

Q ss_pred             ceecccccccccChhhHHHHHhHhcC
Q psy691           87 RYLCTFCGKGFNDTFDLKRHTRTHTG  112 (134)
Q Consensus        87 ~~~C~~C~~~f~~~~~l~~H~~~h~~  112 (134)
                      |.+|..|..+...+..|+.|.|+|..
T Consensus         2 pekc~ecsyscsskaalrvh~rihc~   27 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHCT   27 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGCC
T ss_pred             CccCcccccccCcHHHHHHhhccccC
Confidence            56899999999999999999999964

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.97  E-value=0.021  Score=26.34  Aligned_cols=27  Identities=22%  Similarity=0.487  Sum_probs=22.6

Q ss_pred             CCCceeccccccccCChHHHHHHHHHc
Q psy691           56 DNTRFACHLCSKSFSLQRLLNRHMKCH   82 (134)
Q Consensus        56 ~~~~~~C~~C~~~f~~~~~l~~H~~~h   82 (134)
                      .+.+-.|++|+.......+|++|+...
T Consensus        21 s~qpatcpic~avirqsrnlrrhlel~   47 (54)
T d1yuja_          21 SEQPATCPICYAVIRQSRNLRRHLELR   47 (54)
T ss_dssp             TSCCEECTTTCCEESSHHHHHHHHHHH
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHHH
Confidence            355789999999999999999998763

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.96  E-value=0.0036  Score=25.15  Aligned_cols=22  Identities=23%  Similarity=0.517  Sum_probs=16.3

Q ss_pred             eeccccccccCChHHHHHHHHH
Q psy691           60 FACHLCSKSFSLQRLLNRHMKC   81 (134)
Q Consensus        60 ~~C~~C~~~f~~~~~l~~H~~~   81 (134)
                      |.|+.|+....+++.|..|++.
T Consensus         3 ~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHH
T ss_pred             ccCCcchhheeehhhhhHHhhh
Confidence            6777777777777777777764

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.71  E-value=0.0029  Score=29.48  Aligned_cols=25  Identities=36%  Similarity=0.713  Sum_probs=22.4

Q ss_pred             ceecccccccccChhhHHHHHhHhc
Q psy691           87 RYLCTFCGKGFNDTFDLKRHTRTHT  111 (134)
Q Consensus        87 ~~~C~~C~~~f~~~~~l~~H~~~h~  111 (134)
                      -|.|..|+|.|....-|+.|...|.
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             eeeccccccccCCHHHHhHhHHhcC
Confidence            4789999999999999999988774

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.67  E-value=0.0085  Score=24.42  Aligned_cols=23  Identities=26%  Similarity=0.557  Sum_probs=18.6

Q ss_pred             ceeccccccccCChHHHHHHHHH
Q psy691           59 RFACHLCSKSFSLQRLLNRHMKC   81 (134)
Q Consensus        59 ~~~C~~C~~~f~~~~~l~~H~~~   81 (134)
                      .|.|..||+..++...++.|+-.
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvma   24 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVMA   24 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHH
T ss_pred             ceechhHHHHHhhccCceEEEee
Confidence            47888888888888888888765

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.46  E-value=0.0055  Score=24.42  Aligned_cols=24  Identities=33%  Similarity=0.804  Sum_probs=20.3

Q ss_pred             eeccc--cccccCChHHHHHHHHHcC
Q psy691           60 FACHL--CSKSFSLQRLLNRHMKCHS   83 (134)
Q Consensus        60 ~~C~~--C~~~f~~~~~l~~H~~~h~   83 (134)
                      |.|..  |++.|+....|+.|+.+|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            55654  9999999999999998885

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.26  E-value=0.0088  Score=24.78  Aligned_cols=28  Identities=21%  Similarity=0.617  Sum_probs=23.9

Q ss_pred             Cceeccc--cccccCChHHHHHHHHHcCCC
Q psy691           58 TRFACHL--CSKSFSLQRLLNRHMKCHSDV   85 (134)
Q Consensus        58 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~   85 (134)
                      +.|.|.+  |+-.|...--|..|+..|+|+
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            4578876  999999999999999999875

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.01  E-value=0.011  Score=23.75  Aligned_cols=24  Identities=25%  Similarity=0.553  Sum_probs=21.6

Q ss_pred             ceecccccccccChhhHHHHHhHh
Q psy691           87 RYLCTFCGKGFNDTFDLKRHTRTH  110 (134)
Q Consensus        87 ~~~C~~C~~~f~~~~~l~~H~~~h  110 (134)
                      .|+|+.|+-...+++.|..|++..
T Consensus         2 k~qcphc~tiiarksdlrvhlrnl   25 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRKQ   25 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHT
T ss_pred             CccCCcchhheeehhhhhHHhhhc
Confidence            389999999999999999998873

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=94.94  E-value=0.0075  Score=25.52  Aligned_cols=22  Identities=36%  Similarity=0.659  Sum_probs=18.6

Q ss_pred             ceeccccccccCChHHHHHHHH
Q psy691           59 RFACHLCSKSFSLQRLLNRHMK   80 (134)
Q Consensus        59 ~~~C~~C~~~f~~~~~l~~H~~   80 (134)
                      .|.|.-||..|.+.+.|..|+.
T Consensus         8 rf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHTT
T ss_pred             ceeccccceeecChhHHHhhhh
Confidence            5889999999999998888854

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.86  E-value=0.015  Score=28.96  Aligned_cols=38  Identities=26%  Similarity=0.640  Sum_probs=25.3

Q ss_pred             CCCceeccccccccCChHHHHHHHHHcCCCCceeccccccc
Q psy691           56 DNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKG   96 (134)
Q Consensus        56 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~~   96 (134)
                      ....|.|+.|++.|+.   |-.-...-...--|.|.+|+-.
T Consensus        11 ~~~~y~Cp~C~~~ys~---Lda~~L~d~~~~~F~C~~C~~e   48 (62)
T d1vd4a_          11 NRASFKCPVCSSTFTD---LEANQLFDPMTGTFRCTFCHTE   48 (62)
T ss_dssp             SSSEEECSSSCCEEEH---HHHHHHEETTTTEEBCSSSCCB
T ss_pred             cCCceECCCCCCCcch---hhHHHhcCcCCCeEEecCCCCE
Confidence            3456999999999874   3333344444556899988743

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.77  E-value=0.012  Score=23.70  Aligned_cols=18  Identities=39%  Similarity=0.768  Sum_probs=14.7

Q ss_pred             ccccccChhhHHHHHhHh
Q psy691           93 CGKGFNDTFDLKRHTRTH  110 (134)
Q Consensus        93 C~~~f~~~~~l~~H~~~h  110 (134)
                      |.|.|...+.++.|+-+|
T Consensus         9 C~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           9 CTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             CCCEESSHHHHHHHHGGG
T ss_pred             HHHHhhchHHHHHHhhcc
Confidence            888888888888887776

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.38  E-value=0.018  Score=23.33  Aligned_cols=17  Identities=29%  Similarity=0.649  Sum_probs=13.1

Q ss_pred             ccccccChhhHHHHHhH
Q psy691           93 CGKGFNDTFDLKRHTRT  109 (134)
Q Consensus        93 C~~~f~~~~~l~~H~~~  109 (134)
                      |++.|+.+..|..|.+-
T Consensus         8 c~kifsnrqylnhh~ky   24 (30)
T d2dlka1           8 CGRIFSNRQYLNHHKKY   24 (30)
T ss_dssp             TCCEESSHHHHHHHHHH
T ss_pred             chhhhccHHHHHhHHHH
Confidence            88888888888777664

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.96  E-value=0.011  Score=29.96  Aligned_cols=25  Identities=20%  Similarity=0.420  Sum_probs=20.5

Q ss_pred             CCceeccccccccCChHHHHHHHHH
Q psy691           57 NTRFACHLCSKSFSLQRLLNRHMKC   81 (134)
Q Consensus        57 ~~~~~C~~C~~~f~~~~~l~~H~~~   81 (134)
                      ...|.|..|++.|.+...|..|+++
T Consensus        13 ~gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          13 GGLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CCEEecccccCccCCHHHHHHHHcc
Confidence            4568999999999999998888663

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=93.69  E-value=0.033  Score=23.76  Aligned_cols=25  Identities=20%  Similarity=0.565  Sum_probs=17.5

Q ss_pred             CCceeccccccccCChHHHHHHHHH
Q psy691           57 NTRFACHLCSKSFSLQRLLNRHMKC   81 (134)
Q Consensus        57 ~~~~~C~~C~~~f~~~~~l~~H~~~   81 (134)
                      +..|.|.+|.+.++..+++-+|..+
T Consensus         6 ~~~yRC~~C~r~YTHISNFCRHyvt   30 (37)
T d2drpa1           6 EHTYRCKVCSRVYTHISNFCRHYVT   30 (37)
T ss_dssp             TTEEECTTTCCEESSHHHHHHHHHH
T ss_pred             CcEEEeehhhHHHHHHHHHHHHHHh
Confidence            4457777777777777777777654

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=93.64  E-value=0.043  Score=25.31  Aligned_cols=31  Identities=16%  Similarity=0.280  Sum_probs=25.8

Q ss_pred             CCCceecccccccccChhhHHHHHhHhcCCC
Q psy691           84 DVKRYLCTFCGKGFNDTFDLKRHTRTHTGKE  114 (134)
Q Consensus        84 ~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~  114 (134)
                      .+.|-.|++|+....+..+|++|...-+=.+
T Consensus        21 s~qpatcpic~avirqsrnlrrhlel~hf~k   51 (54)
T d1yuja_          21 SEQPATCPICYAVIRQSRNLRRHLELRHFAK   51 (54)
T ss_dssp             TSCCEECTTTCCEESSHHHHHHHHHHHTSCS
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHHHhhcc
Confidence            4678999999999999999999987744333

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=93.63  E-value=0.025  Score=23.87  Aligned_cols=25  Identities=28%  Similarity=0.623  Sum_probs=21.6

Q ss_pred             CceecccccccccChhhHHHHHhHh
Q psy691           86 KRYLCTFCGKGFNDTFDLKRHTRTH  110 (134)
Q Consensus        86 k~~~C~~C~~~f~~~~~l~~H~~~h  110 (134)
                      -.|.|.-||-+|+..+.|..|+.-.
T Consensus         7 arf~c~pcgirfss~stleahqtyy   31 (36)
T d1y0jb1           7 ARFMCLPCGIAFSSPSTLEAHQAYY   31 (36)
T ss_dssp             CCCBCTTTCCBCSCHHHHHHHTTTT
T ss_pred             cceeccccceeecChhHHHhhhhee
Confidence            3589999999999999999997643

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.87  E-value=0.017  Score=29.24  Aligned_cols=23  Identities=35%  Similarity=0.571  Sum_probs=20.9

Q ss_pred             ceecccccccccChhhHHHHHhH
Q psy691           87 RYLCTFCGKGFNDTFDLKRHTRT  109 (134)
Q Consensus        87 ~~~C~~C~~~f~~~~~l~~H~~~  109 (134)
                      .|-|..|++.|.....|..|+++
T Consensus        15 qfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          15 LHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             CSEETTTTEECSSHHHHHHHTTC
T ss_pred             EEecccccCccCCHHHHHHHHcc
Confidence            48899999999999999999775

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.69  E-value=0.091  Score=25.98  Aligned_cols=30  Identities=20%  Similarity=0.560  Sum_probs=25.3

Q ss_pred             CCCCceeccccccccCChHHHHHHHHHcCC
Q psy691           55 KDNTRFACHLCSKSFSLQRLLNRHMKCHSD   84 (134)
Q Consensus        55 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   84 (134)
                      .....|.|..|...|.+-..|..|+..|..
T Consensus        14 ~~s~~yQC~HCd~K~~s~~el~~hl~~hne   43 (75)
T d1x6fa1          14 LQNSTYQCKHCDSKLQSTAELTSHLNIHNE   43 (75)
T ss_dssp             CCCSCEECSSSCCEESSHHHHHHHHHHHHH
T ss_pred             cCCceeeechhHHHHhhHHHHHHHHHhccH
Confidence            345569999999999999999999988853

>d1m36a_ g.37.1.2 (A:) Monocytic leukemia zinc finger protein Moz {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: Monocytic leukemia zinc finger protein Moz
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.93  E-value=0.054  Score=23.17  Aligned_cols=23  Identities=39%  Similarity=0.714  Sum_probs=16.3

Q ss_pred             CceecccccccccChhhHHHHHh
Q psy691           86 KRYLCTFCGKGFNDTFDLKRHTR  108 (134)
Q Consensus        86 k~~~C~~C~~~f~~~~~l~~H~~  108 (134)
                      +-|.|++|-|-......+.+|+.
T Consensus         6 kLyiCEfCLKYmks~~~l~RH~~   28 (33)
T d1m36a_           6 KLYLCEFCLKYMKSRTILQQHMK   28 (33)
T ss_dssp             CCEECSSSCCEESCHHHHHHHHH
T ss_pred             eeeeehhhhhhhCCHHHHHHHHH
Confidence            45777777777777777777764

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=91.20  E-value=0.1  Score=22.20  Aligned_cols=28  Identities=21%  Similarity=0.477  Sum_probs=23.8

Q ss_pred             CCCceecccccccccChhhHHHHHhHhc
Q psy691           84 DVKRYLCTFCGKGFNDTFDLKRHTRTHT  111 (134)
Q Consensus        84 ~~k~~~C~~C~~~f~~~~~l~~H~~~h~  111 (134)
                      ++.-|.|.+|.+.+...+++-+|-.+.+
T Consensus         5 g~~~yRC~~C~r~YTHISNFCRHyvtSH   32 (37)
T d2drpa1           5 GEHTYRCKVCSRVYTHISNFCRHYVTSH   32 (37)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHHHS
T ss_pred             cCcEEEeehhhHHHHHHHHHHHHHHhhc
Confidence            4557999999999999999999977643

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=91.18  E-value=0.052  Score=23.83  Aligned_cols=26  Identities=15%  Similarity=0.402  Sum_probs=17.4

Q ss_pred             CCceeccccccccCChHHHHHHHHHcCCCCceecccccc
Q psy691           57 NTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGK   95 (134)
Q Consensus        57 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~   95 (134)
                      .+.|.|.+||...             .++-|-.|++|+.
T Consensus         3 ~~~~vC~vCGyi~-------------~g~~Pe~CPvCg~   28 (36)
T d1yuza2           3 DKFHLCPICGYIH-------------KGEDFEKCPICFR   28 (36)
T ss_dssp             CCEEECSSSCCEE-------------ESSCCSBCTTTCC
T ss_pred             CCEEECCCCCCEe-------------eCCCCCcCCCCCC
Confidence            4567888888653             3455667888874

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=90.02  E-value=0.065  Score=23.67  Aligned_cols=26  Identities=23%  Similarity=0.675  Sum_probs=17.5

Q ss_pred             CCceeccccccccCChHHHHHHHHHcCCCCceecccccc
Q psy691           57 NTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGK   95 (134)
Q Consensus        57 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k~~~C~~C~~   95 (134)
                      ++.|.|.+||..+             .++-|-.|++|+.
T Consensus         3 ~~~~~C~vCG~i~-------------~g~~P~~CPvCg~   28 (37)
T d1nnqa2           3 KKVYICPICGYTA-------------VDEAPEYCPVCGA   28 (37)
T ss_dssp             SCEEECTTTCCEE-------------ESCCCSBCTTTCC
T ss_pred             CcEEECCCCCCEe-------------cCCCCCcCCCCCC
Confidence            3457888888664             3456677888874

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=87.69  E-value=0.36  Score=19.37  Aligned_cols=16  Identities=19%  Similarity=0.615  Sum_probs=8.8

Q ss_pred             cccccCChHHHHHHHH
Q psy691           65 CSKSFSLQRLLNRHMK   80 (134)
Q Consensus        65 C~~~f~~~~~l~~H~~   80 (134)
                      |.-.|+.+.+++.|..
T Consensus        10 cdl~fttkanmkkhfn   25 (31)
T d1tf3a3          10 CDLRFTTKANMKKHFN   25 (31)
T ss_dssp             CCCEESSHHHHHHHHH
T ss_pred             cceEEeehHHHHHHHh
Confidence            5555555555555543

>d1fu9a_ g.37.1.2 (A:) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=87.53  E-value=0.24  Score=21.22  Aligned_cols=20  Identities=25%  Similarity=0.504  Sum_probs=12.7

Q ss_pred             eccccccccCChHHHHHHHH
Q psy691           61 ACHLCSKSFSLQRLLNRHMK   80 (134)
Q Consensus        61 ~C~~C~~~f~~~~~l~~H~~   80 (134)
                      -|..|...|..-..+..|.+
T Consensus        10 YC~~CDI~Fn~~~T~~aHKk   29 (36)
T d1fu9a_          10 YCSTCDISFNYVKTYLAHKQ   29 (36)
T ss_dssp             EETTTTEECSSHHHHHHHHH
T ss_pred             HHhhCCceehhHHHHHHHHH
Confidence            46666666666666666644

>d1wira_ g.37.1.5 (A:) Protein arginine N-methyltransferase 3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: variant C2H2 finger
domain: Protein arginine N-methyltransferase 3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=84.62  E-value=0.38  Score=27.05  Aligned_cols=30  Identities=17%  Similarity=0.341  Sum_probs=25.1

Q ss_pred             CCCCceeccccccccCChHHHHHHHHHcCC
Q psy691           55 KDNTRFACHLCSKSFSLQRLLNRHMKCHSD   84 (134)
Q Consensus        55 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   84 (134)
                      ....+-.|-.|.+.|.....+..|++..++
T Consensus        11 ~e~~~~~CLFCd~~f~s~~~~l~H~k~~H~   40 (121)
T d1wira_          11 HGRQHTPCLFCDRLFASAEETFSHCKLEHQ   40 (121)
T ss_dssp             CCCCCEECSSSCCEESSHHHHHHHHHHSSC
T ss_pred             CCcccceecccCCccCCHHHHHHHHHHhhC
Confidence            344567899999999999999999998655

>d1wjpa3 g.37.1.1 (A:67-107) Zinc finger protein 295, ZNF295 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 295, ZNF295
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.12  E-value=0.66  Score=19.77  Aligned_cols=23  Identities=22%  Similarity=0.443  Sum_probs=16.3

Q ss_pred             ceeccccccccCChHHHHHHHHH
Q psy691           59 RFACHLCSKSFSLQRLLNRHMKC   81 (134)
Q Consensus        59 ~~~C~~C~~~f~~~~~l~~H~~~   81 (134)
                      ...|-+|-++|++...+.+|+-.
T Consensus         3 kltclecmrtfkssfsiwrhqve   25 (41)
T d1wjpa3           3 KLTCLECMRTFKSSFSIWRHQVE   25 (41)
T ss_dssp             GGEEGGGTEECSSHHHHHHHHHH
T ss_pred             cccHHHHHHHHHHHHHHHHhhhe
Confidence            35677777777777777777654

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.63  E-value=0.37  Score=23.71  Aligned_cols=28  Identities=25%  Similarity=0.549  Sum_probs=24.1

Q ss_pred             CCceecccccccccChhhHHHHHhHhcC
Q psy691           85 VKRYLCTFCGKGFNDTFDLKRHTRTHTG  112 (134)
Q Consensus        85 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~  112 (134)
                      ..-|+|..|.-.|.....|..|...|..
T Consensus        16 s~~yQC~HCd~K~~s~~el~~hl~~hne   43 (75)
T d1x6fa1          16 NSTYQCKHCDSKLQSTAELTSHLNIHNE   43 (75)
T ss_dssp             CSCEECSSSCCEESSHHHHHHHHHHHHH
T ss_pred             CceeeechhHHHHhhHHHHHHHHHhccH
Confidence            3469999999999999999999888753

>d2czra1 c.52.4.1 (A:1-218) TBP-interacting protein {Thermococcus kodakaraensis [TaxId: 311400]}

class: Alpha and beta proteins (a/b)
fold: Restriction endonuclease-like
superfamily: TBP-interacting protein-like
family: TBP-interacting protein-like
domain: TBP-interacting protein
species: Thermococcus kodakaraensis [TaxId: 311400]

Probab=83.13  E-value=0.24  Score=29.52  Aligned_cols=38  Identities=34%  Similarity=0.578  Sum_probs=26.5

Q ss_pred             HHHHHHHHHcC-CCC------ceecccccccccChhhHHHHHhHhc
Q psy691           73 RLLNRHMKCHS-DVK------RYLCTFCGKGFNDTFDLKRHTRTHT  111 (134)
Q Consensus        73 ~~l~~H~~~h~-~~k------~~~C~~C~~~f~~~~~l~~H~~~h~  111 (134)
                      ..|..|+..-. ..+      =|+|..|++ +..-.+|.+|++.|.
T Consensus       125 grlieHiK~~m~~GqDyvFWQFYKCe~CgK-YvDie~~~~H~k~HG  169 (218)
T d2czra1         125 AALVNHIKNNALAGQDYIFWQFYKCEECGK-YVDIENLEAHLREHG  169 (218)
T ss_dssp             HHHHHHHHTTCCBTTTEEEEEEEECTTTCC-EEEGGGHHHHHHTTT
T ss_pred             HHHHHHHHhccccCcceEEEEEeehhhcCc-eecHHHHHHHHHHcC
Confidence            45666665421 122      379999997 567789999999884