Psyllid ID: psy6936

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030--
MDQITVKEVKILETANDIQERREQVLNRYADFKSEARSKREKLEDSRRFQYFKRDADELESWIYEKLQAASDESYKETTNLQAKIQKHQAFEAEVAAHSNAIVVLDNTGKEMINQNHFASEVIRKRLEELHRLWELLLSKLAEKGMKLQQALVLVQFIRQCDEVMFWINDKEAFVTADEFGADLEHVEVLQRKFDEFQKDMASQEYRVTEVNQLADKLVLEGHPERETIVRRKEELSEAWMRLKQLALMRQEKLFGAHEIQRFNRDADETVAWIAEKDAVLSSDEYGRDLASVQTLQRKHEGVERDLAALEDKVSTLGAEADRLCGIHSDHGDQIQAKRAEIVEYWERLTGKAKGRKQKLDESYYLHRFLADYRDLISWVSDMKAIISADELAKDVAGAEALLERHQEHKGEIDAREDSFRGTADAGQSLLDRNHYAADDIREKLRNLENDKTHLLTLWEERRILYEQCMDLQLFYRDTEQADTWMAKQEAFLSNEDLGDSLDSVEALIKKHEDFEKSLAAQEEKIKALDEFATKLIEGQHYAADDVAQRRDLLLKRRAGLLEKSARRRAILEDSYKFQQFEEIVEYWERLTGKAKGRKQKLDESYYLHRFLADYRDLISWVSDMKAIISADELAKDVAGAEALLERHQEHKGEIDAREDSFRGTADAGQSLLDRNHYAADDIREKLRNLENDKTHLLTLWEERRILYEQCMDLQLFYRDTEQADTWMAKQEAFLSNEDLGDSLDSVEALIKKHEDFEKSLAAQEEKIKALDDLLKVNTMQIKALDEFATKLIEGQHYAADDVAQRRDLLLKRRAGLLEKSARRRAILEDSYKFQQFERDCDETKSWVTEKLKFANDDNYLDPTNLNGKVQKHQNFEQELNANKTRMDEITSTGQELLEANHYASDKIRQRMEQIVHLWESLATATEKKGNKLQEASQQQGFNRTIEDIELWLSEIEGQLMSEDYGKDLTSVQNLQKKHALLEADVASHLDRIESVKAATEQFLERGHFDADNIKAKQAAMCERYENLQRPI
ccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHccc
ccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHcc
MDQITVKEVKILETANDIQERREQVLNRYADFKSEARSKREKLEDSRRFQYFKRDADELESWIYEKLQAASDESYKETTNLQAKIQKHQAFEAEVAAHSNAIVVLDntgkeminqNHFASEVIRKRLEELHRLWELLLSKLAEKGMKLQQALVLVQFIRQCDEVMFWINDKEAFVTADEFGADLEHVEVLQRKFDEFQKDMASQEYRVTEVNQLADKLvleghperETIVRRKEELSEAWMRLKQLALMRQEKLFGAHEIQRFNRDADETVAWIAEKDAvlssdeygrDLASVQTLQRKHEGVERDLAALEDKVSTLGAEAdrlcgihsdhgdQIQAKRAEIVEYWERLTGKAKGRKQKLDESYYLHRFLADYRDLISWVSDMKAIISADELAKDVAGAEALLERHQEHkgeidaredsfrgtadAGQSLLDRNHYAADDIREKLRNLENDKTHLLTLWEERRILYEQCMDLQLFYRDTEQADTWMAKQEAFlsnedlgdsLDSVEALIKKHEDFEKSLAAQEEKIKALDEFATKLIEGQHYAADDVAQRRDLLLKRRAGLLEKSARRRAILEDSYKFQQFEEIVEYWERLTGKAKGRKQKLDESYYLHRFLADYRDLISWVSDMKAIISADELAKDVAGAEALLERHQEHkgeidaredsfrgtadAGQSLLDRNHYAADDIREKLRNLENDKTHLLTLWEERRILYEQCMDLQLFYRDTEQADTWMAKQEAFlsnedlgdsLDSVEALIKKHEDFEKSLAAQEEKIKALDDLLKVNTMQIKALDEFATKLIEGQHYAADDVAQRRDLLLKRRAGLLEKSARRRAILEDSYKFQQFERDCDETKSWVTEKLkfanddnyldptnlngkvqKHQNFEQELNANKTRMDEITSTGQELLEANHYASDKIRQRMEQIVHLWESLATATEKKGNKLQEASQQQGFNRTIEDIELWLSEIEGQlmsedygkDLTSVQNLQKKHALLEADVASHLDRIESVKAATEQFLERGHFDADNIKAKQAAMCERYENLQRPI
mdqitvkevkiletandiqerreqvlnryadfksearskrekledsrrfqyfkrdadelESWIYEKLQAASDESYKETTNLQAKIQKHQAFEAEVAAHSNAIVVLDNTGKEMINQNHFASEVIRKRLEELHRLWELLLSKLAEKGMKLQQALVLVQFIRQCDEVMFWINDKEAFVTADEFGADLEHVEVLQRKFDEFQKDMASQEYRVTEVNQLadklvleghperetivrRKEELSEAWMRLKQLALMRQEKLFGAHEIQRFNRDADETVAWIAEKdavlssdeyGRDLASVQTLQRKHEGVERDLAALEDKVSTLGAEADRLCgihsdhgdqiQAKRAEIVEYWERLtgkakgrkqkldeSYYLHRFLADYRDLISWVSDMKAIISADELAKDVAGAEALLERHQEHkgeidaredsfrGTADAGQSLLDRNHYAADDIREKLRNLENDKTHLLTLWEERRILYEQCMDLQLFYRDTEQADTWMAKQEAFLSNEDLGDSLDSVEALIKKHEDFEKSLAAQEEKIKALDEFATKLIEGQHYAADDVAQRRDLLLKRRAglleksarrrailedsykfqqFEEIVEYWERLtgkakgrkqkldeSYYLHRFLADYRDLISWVSDMKAIISADELAKDVAGAEALLERHQEHkgeidaredsfrGTADAGQSLLDRNHYAADDIREKLRNLENDKTHLLTLWEERRILYEQCMDLQLFYRDTEQADTWMAKQEAFLSNEDLGDSLDSVEALIKKHEDFEKSLAAQEEKIKALDDLLKVNTMQIKALDEFATKLIEGQHYAADDVAQRRDLLLKRRAglleksarrrailedsykfqqferdcdETKSWVTEKLKfanddnyldPTNLNGKVQKHQNFEQELNANKTRMDEITSTGQELLEANHYASDKIRQRMEQIVHLWESLATATEKKGNKLqeasqqqgfnrTIEDIELWLSEIEGQLMSEDYGKDLTSVQNLQKKHALLEADVASHLDRIESVKAATEQFLERGHFDADNIKAKQAAMCERYENLQRPI
MDQITVKEVKILETANDIQERREQVLNRYADFKSEARSKREKLEDSRRFQYFKRDADELESWIYEKLQAASDESYKETTNLQAKIQKHQAFEAEVAAHSNAIVVLDNTGKEMINQNHFASEVIrkrleelhrlwelllsklAEKGMKLQQALVLVQFIRQCDEVMFWINDKEAFVTADEFGADLEHVEVLQRKFDEFQKDMASQEYRVTEVNQLADKLVLEGHPERETIVRRKEELSEAWMRLKQLALMRQEKLFGAHEIQRFNRDADETVAWIAEKDAVLSSDEYGRDLASVQTLQRKHEGVERDLAALEDKVSTLGAEADRLCGIHSDHGDQIQAKRAEIVEYWERLTGKAKGRKQKLDESYYLHRFLADYRDLISWVSDMKAIISADELAKDVAGAEALLERHQEHKGEIDAREDSFRGTADAGQSLLDRNHYAADDIREKLRNLENDKTHLLTLWEERRILYEQCMDLQLFYRDTEQADTWMAKQEAFLSNEDLGDSLDSVEALIKKHEDFEKSLAAQEEKIKALDEFATKLIEGQHYAADDVAQRRDLLLKRRAGLLEKSARRRAILEDSYKFQQFEEIVEYWERLTGKAKGRKQKLDESYYLHRFLADYRDLISWVSDMKAIISADELAKDVAGAEALLERHQEHKGEIDAREDSFRGTADAGQSLLDRNHYAADDIREKLRNLENDKTHLLTLWEERRILYEQCMDLQLFYRDTEQADTWMAKQEAFLSNEDLGDSLDSVEALIKKHEDFEKSLAAQEEKIKALDDLLKVNTMQIKALDEFATKLIEGQHYAADDVAQRRDLLLKRRAGLLEKSARRRAILEDSYKFQQFERDCDETKSWVTEKLKFANDDNYLDPTNLNGKVQKHQNFEQELNANKTRMDEITSTGQELLEANHYASDKIRQRMEQIVHLWESLATATEKKGNKLQEASQQQGFNRTIEDIELWLSEIEGQLMSEDYGKDLTSVQNLQKKHALLEADVASHLDRIESVKAATEQFLERGHFDADNIKAKQAAMCERYENLQRPI
*************************************************QYFKRDADELESWIYEKLQ****************IQKHQAFEAEVAAHSNAIVVLDNTGKEMINQNHFASEVIRKRLEELHRLWELLLSKLAEKGMKLQQALVLVQFIRQCDEVMFWINDKEAFVTADEFGADLEHVEVLQRKFDEFQKDMASQEYRVTEVNQLADKLVLEGH****TIVRRKEELSEAWMRLKQLALMRQEKLFGAHEIQRFNRDADETVAWIAEKDAVLSSDEYGRDL*****************AALEDKVSTLGAEADRLCGIHSDHGDQIQAKRAEIVEYWERLTGKAKGRKQKLDESYYLHRFLADYRDLISWVSDMKAIISADELAKDVAGA************************************YAADDIREKLRNLENDKTHLLTLWEERRILYEQCMDLQLFYRDTEQADTWMAKQEAFLS*************L*****************IKALDEFATKLIEGQHYAADDVAQRRDLLLKRRAGLLEKSARRRAILEDSYKFQQFEEIVEYWERLTGKAKGRKQKLDESYYLHRFLADYRDLISWVSDMKAIISADELAKDVAGA************************************YAADDIREKLRNLENDKTHLLTLWEERRILYEQCMDLQLFYRDTEQADTWMAKQEAFLS*************LI***************KIKALDDLLKVNTMQIKALDEFATKLIEGQHYAADDVAQRRDLLLKRRAGLLEKSARRRAILEDSYKFQQFERDCDETKSWVTEKLKFANDDNYL**********************************************IRQRMEQIVHLWESLA******************FNRTIEDIELWLSEIEGQLMSEDYGKDLTSVQNLQKKHALLEADVASHLDRIESVKAATEQFLERGHFDA*********************
*********************REQVLNRYADFKSEARSKREKLEDSRRFQYFKRDADELESWIY********************IQKHQAFEAEVAA*SNAI**L********************RLEELHRLWELLLSKLAEKGMKLQQALVLVQFIRQCDEVMFWINDKEA************HVEVLQRKFDEFQKDMASQEYRVTEVNQLA*****************KEELSEAWMRLKQLALMRQEKLFGAHEIQRFNRDADETVAWIAEKDA****************LQRKHEGVERDLAALEDK****************************IVEYWERLTGKAKGRKQKLDESYYLHRFLADYRDLISWVSDMK*******************ERHQEHKGEIDAREDSFRGTADAGQ****************LRNLENDKTHLLTLWEERRILYEQCMDLQLFYRDTEQADTWMAKQEA*****************IKKHEDFEKSLAAQEEKIKALDEFATKLI*********VAQRRDLLLKRRAGLLEKSAR********YKFQQFEEIVEYWERLTGKAKGRKQKLDESYYLHRFLADYRDLISWVSDMK**************AEALLERHQEHKGEIDAREDSFRGTADAGQ***************KLRNLENDKTHLLTLWEERRILYEQCMDLQLFYRDTEQADTWMAKQE***************EALIKKHEDFEKSLAAQEEKIKALDDL**************************DDVAQRRDLLLKRRAGLLEKSARRRAILEDSYKFQQFERDCDETKSWVTE*******************VQKHQNFEQELNANKTRMDEITSTGQE***************MEQIVHLWESLATATEKKGNKLQEASQQQGFNRTIEDIELWLSEIEG**************QNLQKKHALLEADVASHLDRIESVKAATEQFL*******DNIKAKQAAMCERYENLQRPI
MDQITVKEVKILETANDIQERREQVLNRYADFKS**********DSRRFQYFKRDADELESWIYEKLQAA**************IQKHQAFEAEVAAHSNAIVVLDNTGKEMINQNHFASEVIRKRLEELHRLWELLLSKLAEKGMKLQQALVLVQFIRQCDEVMFWINDKEAFVTADEFGADLEHVEVLQRKFDEFQKDMASQEYRVTEVNQLADKLVLEGHPERETIVRRKEELSEAWMRLKQLALMRQEKLFGAHEIQRFNRDADETVAWIAEKDAVLSSDEYGRDLASVQTLQRKHEGVERDLAALEDKVSTLGAEADRLCGIHSDHGDQIQAKRAEIVEYWERLTG********LDESYYLHRFLADYRDLISWVSDMKAIISADELAKDVAGAEALLERHQEHKGEIDAREDSFRGTADAGQSLLDRNHYAADDIREKLRNLENDKTHLLTLWEERRILYEQCMDLQLFYRDTEQADTWMAKQEAFLSNEDLGDSLDSVEALIKKHEDFEKSLAAQEEKIKALDEFATKLIEGQHYAADDVAQRRDLLLKRRAGLLEKSARRRAILEDSYKFQQFEEIVEYWERLT*********LDESYYLHRFLADYRDLISWVSDMKAIISADELAKDVAGAEALLERHQEHKGEIDAREDSFRGTADAGQSLLDRNHYAADDIREKLRNLENDKTHLLTLWEERRILYEQCMDLQLFYRDTEQADTWMAKQEAFLSNEDLGDSLDSVEALIKKHEDFEKSLAAQEEKIKALDDLLKVNTMQIKALDEFATKLIEGQHYAADDVAQRRDLLLKRRAGLLEKSARRRAILEDSYKFQQFERDCDETKSWVTEKLKFANDDNYLDPTNLNGKVQKHQNFEQELNANKTRMDEITSTGQELLEANHYASDKIRQRMEQIVHLWESLATA***************GFNRTIEDIELWLSEIEGQLMSEDYGKDLTSVQNLQKKHALLEADVASHLDRIESVKAATEQFLERGHFDADNIKAKQAAMCERYENLQRPI
****TVKEVKILETANDIQERREQVLNRYADFKSEARSKREKLEDSRRFQYFKRDADELESWIYEKLQAASDESYKETTNLQAKIQKHQAFEAEVAAHSNAIVVLDNTGKEMINQNHFASEVIRKRLEELHRLWELLLSKLAEKGMKLQQALVLVQFIRQCDEVMFWINDKEAFVTADEFGADLEHVEVLQRKFDEFQKDMASQEYRVTEVNQLADKLVLEGHPERETIVRRKEELSEAWMRLKQLALMRQEKLFGAHEIQRFNRDADETVAWIAEKDAVLSSDEYGRDLASVQTLQRKHEGVERDLAALEDKVSTLGAEADRLCGIHSDHGDQIQAKRAEIVEYWERLTGKAKGRKQKLDESYYLHRFLADYRDLISWVSDMKAIISADELAKDVAGAEALLERHQEHKGEIDAREDSFRGTADAGQSLLDRNHYAADDIREKLRNLENDKTHLLTLWEERRILYEQCMDLQLFYRDTEQADTWMAKQEAFLSNEDLGDSLDSVEALIKKHEDFEKSLAAQEEKIKALDEFATKLIEGQHYAADDVAQRRDLLLKRRAGLLEKSARRRAILEDSYKFQQFEEIVEYWERLTGKAKGRKQKLDESYYLHRFLADYRDLISWVSDMKAIISADELAKDVAGAEALLERHQEHKGEIDAREDSFRGTADAGQSLLDRNHYAADDIREKLRNLENDKTHLLTLWEERRILYEQCMDLQLFYRDTEQADTWMAKQEAFLSNEDLGDSLDSVEALIKKHEDFEKSLAAQEEKIKALDDLLKVNTMQIKALDEFATKLIEGQHYAADDVAQRRDLLLKRRAGLLEKSARRRAILEDSYKFQQFERDCDETKSWVTEKLKFANDDNYLDPTNLNGKVQKHQNFEQELNANKTRMDEITSTGQELLEANHYASDKIRQRMEQIVHLWESLATATEKKGNKLQEASQQQGFNRTIEDIELWLSEIEGQLMSEDYGKDLTSVQNLQKKHALLEADVASHLDRIESVKAATEQFLERGHFDADNIKAKQAAMCERYENLQRP*
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MDQITVKEVKILETxxxxxxxxxxxxxxxxxxxxxARSKREKLEDSRRFQYFKRDADELESWIYEKLQAASDESYKETTNLQAKIQKHQAFEAEVAAHSNAIVVLDNTGKEMINQNHFASEVIRKRLEELHRLWELLLSKLAEKGMKLQQALVLVQFIRQCDEVMFWINDKEAFVTADEFGADLEHVEVLQRKFDEFQKDMASQEYRVTEVNQLADKLVLEGHPERETIVRRKEELSEAWMRLKQLALMRQEKLFGAHEIQRFNRDADETVAWIAEKDAVLSSDEYGRDLASxxxxxxxxxxxxxxxxxxxxxxxxxxxxADRLCGIHSDHGDQIQAKRAEIVEYWERLTGKAKGRKQKLDESYYLHRFLADYRDLISWVSDMKAIISxxxxxxxxxxxxxxxxxxxxxKGEIDAREDSFRGTADAGQSLLDRNHYAxxxxxxxxxxxxxxxxxxxxxWEERRILYEQCMDLQLFYRDTEQADTWMAKQEAFLSNEDLGDSLDSxxxxxxxxxxxxxxxxxxxxxIKALDEFATKLIEGQHYAADDVAQRRDLLLKRRAGLLEKSARRRAILEDSYKFQQFEEIVEYWERLTGKAKGRKQKLDESYYLHRFLADYRDLISWVSDMKAIISxxxxxxxxxxxxxxxxxxxxxKGEIDAREDSFRGTADAGQSLLDRNHYAxxxxxxxxxxxxxxxxxxxxxWEERRILYEQCMDLQLFYRDTEQADTWMAKQEAFLSNEDLGDSLDSxxxxxxxxxxxxxxxxxxxxxxxxxxxxLKVNTMQIKALDEFATKLIEGQHYAADDVAQRRDLLLKRRAGLLEKSARRRAILEDSYKFQQFERDCDETKSWVTEKLKFANDDNYLDPTNLNGKVQKHQNFEQELNANKTRMDEITSTGQELLEANHYASDKIRQRMEQIVHLWESLATATEKKGNKLQEASQQQGFNRTIEDIELWLSEIEGQLMSEDYGKDLTSxxxxxxxxxxxxxxxxxxxxxIESVKAATEQFLERGHFDADNIKAKQAAMCERYENLQRPI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query1032 2.2.26 [Sep-21-2011]
P13395 2415 Spectrin alpha chain OS=D yes N/A 0.914 0.390 0.594 0.0
Q13813 2472 Spectrin alpha chain, non yes N/A 0.914 0.381 0.491 0.0
P07751 2477 Spectrin alpha chain, non yes N/A 0.914 0.381 0.487 0.0
P16086 2472 Spectrin alpha chain, non yes N/A 0.914 0.381 0.489 0.0
P16546 2472 Spectrin alpha chain, non yes N/A 0.914 0.381 0.489 0.0
P02549 2419 Spectrin alpha chain, ery no N/A 0.929 0.396 0.360 1e-169
P08032 2415 Spectrin alpha chain, ery no N/A 0.911 0.389 0.368 1e-159
Q00963 2291 Spectrin beta chain OS=Dr no N/A 0.935 0.421 0.274 1e-94
Q01082 2364 Spectrin beta chain, non- no N/A 0.925 0.403 0.264 2e-91
Q62261 2363 Spectrin beta chain, non- no N/A 0.923 0.403 0.266 4e-90
>sp|P13395|SPTCA_DROME Spectrin alpha chain OS=Drosophila melanogaster GN=alpha-Spec PE=1 SV=2 Back     alignment and function desciption
 Score = 1112 bits (2877), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 598/1006 (59%), Positives = 724/1006 (71%), Gaps = 62/1006 (6%)

Query: 1   MDQITVKEVKILETANDIQERREQVLNRYADFKSEARSKREKLEDSRRFQYFKRDADELE 60
           M+  T KEVKILET  DIQERREQVL+RY DFK E R KREKLEDSRRFQYFKRDADELE
Sbjct: 1   MENFTPKEVKILETVEDIQERREQVLSRYNDFKIETRQKREKLEDSRRFQYFKRDADELE 60

Query: 61  SWIYEKLQAASDESYKETTNLQAKIQKHQAFEAEVAAHSNAIVVLDNTGKEMINQNHFAS 120
           SWI+EKLQAAS+ESY++ TNLQAKIQKHQAFEAEV+AHSNAIV LDNTG+EMINQ HFAS
Sbjct: 61  SWIHEKLQAASEESYRDPTNLQAKIQKHQAFEAEVSAHSNAIVSLDNTGQEMINQQHFAS 120

Query: 121 EVIRKRLEELHRLWELLLSKLAEKGMKLQQALVLVQFIRQCDEVMFWINDKEAFVTADEF 180
           E I+ RL+ELH+LWELLLS+LAEKG+KLQQALVLVQF+RQC+EVMFWI DKE FVTADEF
Sbjct: 121 ESIQVRLDELHKLWELLLSRLAEKGLKLQQALVLVQFLRQCEEVMFWIKDKETFVTADEF 180

Query: 181 GADLEHVEVLQRKFDEFQKDMASQEYRVTEVNQLADKLVLEGHPERETIVRRKEELSEAW 240
           G DLEHVEVLQRKFDEFQKDMASQEYRVTEVNQLADKLV +GHPER+TI +RKEEL+EAW
Sbjct: 181 GQDLEHVEVLQRKFDEFQKDMASQEYRVTEVNQLADKLVQDGHPERDTITKRKEELNEAW 240

Query: 241 MRLKQLALMRQEKLFGAHEIQRFNRDADETVAWIAEKDAVLSSDEYGRDLASVQTLQRKH 300
            RLKQLA++RQEKLFGAHEIQRFNRDADETVAWIAEKD VLSSD+YGRDLASVQ LQRKH
Sbjct: 241 QRLKQLAIVRQEKLFGAHEIQRFNRDADETVAWIAEKDVVLSSDDYGRDLASVQALQRKH 300

Query: 301 EGVERDLAALEDKVSTLGAEADRLCGIHSDHGDQIQAKRAEIVEYWERLTGKAKGRKQKL 360
           EGVERDLAALEDKVSTLGAEA RLC IH+DH DQI+ K+AEI  YW+ LT KA+ RKQKL
Sbjct: 301 EGVERDLAALEDKVSTLGAEAQRLCSIHADHSDQIRDKQAEIANYWQSLTTKARERKQKL 360

Query: 361 DESYYLHRFLADYRDLISWVSDMKAIISADELAKDVAGAEALLERHQEHKGEIDAREDSF 420
           DESYYLHRFLAD+RDL+SW++ MKAIISADELAKDVAGAEALLERHQEHKGEIDAREDSF
Sbjct: 361 DESYYLHRFLADFRDLVSWINGMKAIISADELAKDVAGAEALLERHQEHKGEIDAREDSF 420

Query: 421 RGTADAGQSLLDRNHYAADDIREKLRNLENDKTHLLTLWEERRILYEQCMDLQLFYRDTE 480
           + T ++GQ LL+R HYAA +I+EKL  LENDK+ LL+LWE+RRILYEQCMDLQLFYRDTE
Sbjct: 421 KLTTESGQKLLEREHYAAAEIQEKLAALENDKSSLLSLWEDRRILYEQCMDLQLFYRDTE 480

Query: 481 QADTWMAKQEAFLSNEDLGDSLDSVEALIKKHEDFEKSLAAQEEKIKALDEFATKLIEGQ 540
           QADTWMAKQEAFL+NEDLGDSLDSVEALIKKHEDFEKSLAAQEEKIKALD FATKLI+GQ
Sbjct: 481 QADTWMAKQEAFLANEDLGDSLDSVEALIKKHEDFEKSLAAQEEKIKALDIFATKLIDGQ 540

Query: 541 HYAADDVAQRRDLLLKRRAGLLEKSARRRAILEDSYKFQQFEEIVEYWERLTGKAKGRKQ 600
           HYAADDVAQRR +LL RRA L EKS++RR +LEDS ++QQFE       R   + KG   
Sbjct: 541 HYAADDVAQRRQMLLARRAALQEKSSKRRQLLEDSNRYQQFE-------RDCDETKG--- 590

Query: 601 KLDESYYLHRFLADYRDLISWVSDMKAIISADELAKDVAGAEALLERHQEHKGEIDARED 660
                               W+S+ K   + D+   D       +++HQ  + E++A + 
Sbjct: 591 --------------------WISE-KLKFATDDSYLDPTNLNGKMQKHQNFEHELNANKS 629

Query: 661 SFRGTADAGQSLLDRNHYAADDIREKLRNLENDKTHLLTLWE--------ERRILYEQCM 712
                 + G  L+++ HYAAD I  +++        ++ LWE        +   L E C 
Sbjct: 630 RIEDITNVGTELIEKQHYAADQINTRMQ-------EIVVLWETLVQASDKKGTKLNEACQ 682

Query: 713 DLQLFYRDTEQADTWMAKQEAFLSNEDLGDSLDSVEALIKKHEDFEKSLAAQEEKIKALD 772
             Q F R  E  + W+++ E  L +ED G  L SV+ L KKH   E  + A +++I+++ 
Sbjct: 683 QQQ-FNRTIEDIELWLSEIEGQLLSEDHGKDLTSVQNLQKKHALLEADVMAHQDRIESI- 740

Query: 773 DLLKVNTMQIKALDEFATKLIEGQHYAADDVAQRRDLLLKRRAGLLEKSARRRAILEDSY 832
              KV           A K IE  H+ AD++  +   L  R A L      R+  L DS 
Sbjct: 741 ---KVA----------ANKFIESGHFDADNIRNKEGNLSARYAALAAPMGERKQHLLDSL 787

Query: 833 KFQQFERDCDETKSWVTEKLKFANDDNY-LDPTNLNGKVQKHQNFEQELNANKTRMDEIT 891
           + QQ  RD ++  +W+ EK   A   N   D   +   ++KHQ    E+N ++ R+  + 
Sbjct: 788 QVQQLFRDLEDEAAWIREKEPIAASTNRGRDLIGVQNLIKKHQAVLAEINNHEARLLNVI 847

Query: 892 STGQELLEANHYASDKIRQRMEQIVHLWESLATATEKKGNKLQEASQQQGFNRTIEDIEL 951
           S+G+ +L+   +ASD IRQR+E +   W +L   + ++   L ++ Q   +     + E 
Sbjct: 848 SSGENMLKDQPFASDDIRQRLEALQEQWNTLKEKSSQRKQDLDDSLQAHQYFADANEAES 907

Query: 952 WLSEIEGQLMSEDYGKDLTSVQNLQKKHALLEADVASHLDRIESVK 997
           W+ E E      DYGKD  S + L KKH  L +D+ +  + I++++
Sbjct: 908 WMREKEPIATGSDYGKDEDSSEALLKKHEALVSDLEAFGNTIQALQ 953
Spectrin is the major constituent of the cytoskeletal network underlying the erythrocyte plasma membrane. It associates with band 4.1 and actin to form the cytoskeletal superstructure of the erythrocyte plasma membrane. Essential for larval survival and development. Stabilizes cell to cell interactions that are critical for the maintenance of cell shape and subcellular organization within embryonic tissues. Lva and spectrin may form a Golgi-based scaffold that mediates interaction of Golgi bodies with microtubules and facilitates Golgi-derived membrane secretion required for the formation of furrows during cellularization.
Drosophila melanogaster (taxid: 7227)
>sp|Q13813|SPTN1_HUMAN Spectrin alpha chain, non-erythrocytic 1 OS=Homo sapiens GN=SPTAN1 PE=1 SV=3 Back     alignment and function description
>sp|P07751|SPTN1_CHICK Spectrin alpha chain, non-erythrocytic 1 OS=Gallus gallus GN=SPTAN1 PE=1 SV=3 Back     alignment and function description
>sp|P16086|SPTN1_RAT Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus GN=Sptan1 PE=1 SV=2 Back     alignment and function description
>sp|P16546|SPTN1_MOUSE Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus GN=Sptan1 PE=1 SV=4 Back     alignment and function description
>sp|P02549|SPTA1_HUMAN Spectrin alpha chain, erythrocytic 1 OS=Homo sapiens GN=SPTA1 PE=1 SV=5 Back     alignment and function description
>sp|P08032|SPTA1_MOUSE Spectrin alpha chain, erythrocytic 1 OS=Mus musculus GN=Spta1 PE=2 SV=3 Back     alignment and function description
>sp|Q00963|SPTCB_DROME Spectrin beta chain OS=Drosophila melanogaster GN=beta-Spec PE=1 SV=2 Back     alignment and function description
>sp|Q01082|SPTB2_HUMAN Spectrin beta chain, non-erythrocytic 1 OS=Homo sapiens GN=SPTBN1 PE=1 SV=2 Back     alignment and function description
>sp|Q62261|SPTB2_MOUSE Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus GN=Sptbn1 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1032
242019111 2414 Spectrin alpha chain, putative [Pediculu 0.922 0.394 0.609 0.0
195336722 2447 GM14169 [Drosophila sechellia] gi|194128 0.914 0.385 0.594 0.0
195490569 2447 GE20915 [Drosophila yakuba] gi|194179295 0.914 0.385 0.594 0.0
195587054 2447 GD13438 [Drosophila simulans] gi|1941952 0.914 0.385 0.594 0.0
442629558 2457 alpha spectrin, isoform B [Drosophila me 0.914 0.384 0.594 0.0
442629560 2447 alpha spectrin, isoform C [Drosophila me 0.914 0.385 0.594 0.0
158489 2415 alpha-spectrin [Drosophila melanogaster] 0.914 0.390 0.594 0.0
17136504 2415 alpha spectrin, isoform A [Drosophila me 0.914 0.390 0.594 0.0
194864980 2447 GG14560 [Drosophila erecta] gi|190652984 0.914 0.385 0.594 0.0
195125353 2441 GI12773 [Drosophila mojavensis] gi|19391 0.914 0.386 0.590 0.0
>gi|242019111|ref|XP_002430009.1| Spectrin alpha chain, putative [Pediculus humanus corporis] gi|212515067|gb|EEB17271.1| Spectrin alpha chain, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
 Score = 1144 bits (2959), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 608/998 (60%), Positives = 725/998 (72%), Gaps = 46/998 (4%)

Query: 1   MDQITVKEVKILETANDIQERREQVLNRYADFKSEARSKREKLEDSRRFQYFKRDADELE 60
           M+QIT KEVKILET  DIQERR+QVLNRY +FKSEAR+KREKLEDSRR+QYFKRDADELE
Sbjct: 1   MEQITPKEVKILETVEDIQERRDQVLNRYGEFKSEARAKREKLEDSRRYQYFKRDADELE 60

Query: 61  SWIYEKLQAASDESYKETTNLQAKIQKHQAFEAEVAAHSNAIVVLDNTGKEMINQNHFAS 120
           SWIYEKLQAASDESYK+ TNLQAKIQKHQAFEAEVAAHSNAIVVLDNTG+EMI QNHFAS
Sbjct: 61  SWIYEKLQAASDESYKDCTNLQAKIQKHQAFEAEVAAHSNAIVVLDNTGQEMIQQNHFAS 120

Query: 121 EVIRKRLEELHRLWELLLSKLAEKGMKLQQALVLVQFIRQCDEVMFWINDKEAFVTADEF 180
           + I+KRL++LH LWELLLS+LAEKGMKL QALVLVQF RQCDEVMFWINDKE FVT DEF
Sbjct: 121 DTIKKRLDDLHALWELLLSRLAEKGMKLNQALVLVQFFRQCDEVMFWINDKETFVTTDEF 180

Query: 181 GADLEHVEVLQRKFDEFQKDMASQEYRVTEVNQLADKLVLEGHPERETIVRRKEELSEAW 240
           G DLEHVEVLQRKFDEFQKDMASQEYRVTEVN+LADKLVLEGHPERE I+RRKE+L+E W
Sbjct: 181 GDDLEHVEVLQRKFDEFQKDMASQEYRVTEVNELADKLVLEGHPEREVIIRRKEDLNEKW 240

Query: 241 MRLKQLALMRQEKLFGAHEIQRFNRDADETVAWIAEKDAVLSSDEYGRDLASVQTLQRKH 300
            RLKQLALMRQEKLFGAHEIQRFNRDADETVAWI+EKDAVLSSD+YGRDLASVQTLQRKH
Sbjct: 241 ARLKQLALMRQEKLFGAHEIQRFNRDADETVAWISEKDAVLSSDDYGRDLASVQTLQRKH 300

Query: 301 EGVERDLAALEDKVSTLGAEADRLCGIHSDHGDQIQAKRAEIVEYWERLTGKAKGRKQKL 360
           EGVERDLAALEDKVSTLG EADRLCGIH+DHGDQIQAKRAEIV YWE LT KAK R+ KL
Sbjct: 301 EGVERDLAALEDKVSTLGQEADRLCGIHADHGDQIQAKRAEIVSYWESLTAKAKERRSKL 360

Query: 361 DESYYLHRFLADYRDLISWVSDMKAIISADELAKDVAGAEALLERHQEHKGEIDAREDSF 420
           DESY+LHRFLAD+RDLISW++DMK IISADELAKDVAGAE+LLERHQEHKGEIDAREDSF
Sbjct: 361 DESYHLHRFLADFRDLISWINDMKTIISADELAKDVAGAESLLERHQEHKGEIDAREDSF 420

Query: 421 RGTADAGQSLLDRNHYAADDIREKLRNLENDKTHLLTLWEERRILYEQCMDLQLFYRDTE 480
             T DAGQ+LL R+HYA+ +I++KL  L N+K  LL LWEERRILYEQCMDLQLFYRDTE
Sbjct: 421 AATTDAGQALLARDHYASQEIKDKLLTLSNEKISLLGLWEERRILYEQCMDLQLFYRDTE 480

Query: 481 QADTWMAKQEAFLSNEDLGDSLDSVEALIKKHEDFEKSLAAQEEKIKALDEFATKLIEGQ 540
           QADTWMAKQEAFL+NEDLGDSLDSVEALIKKHEDFEKSL AQEEKIKALDEFATKLIEGQ
Sbjct: 481 QADTWMAKQEAFLANEDLGDSLDSVEALIKKHEDFEKSLTAQEEKIKALDEFATKLIEGQ 540

Query: 541 HYAADDVAQRRDLLLKRRAGLLEKSARRRAILEDSYKFQQFEEIVEYWERLTGKAKGRKQ 600
           HYAADDVAQRR +LL+RRA LLEKSA RR IL DS++ QQF       ER   + KG   
Sbjct: 541 HYAADDVAQRRAMLLERRAALLEKSANRRDILNDSFRLQQF-------ERDCDETKG--- 590

Query: 601 KLDESYYLHRFLADYRDLISWVSDMKAIISADELAKDVAGAEALLERHQEHKGEIDARED 660
                               W+++ K   + D+   D       +++HQ  + E+ A   
Sbjct: 591 --------------------WINE-KLKFATDDNYLDPTNLNGKVQKHQNFEQELGANRS 629

Query: 661 SFRGTADAGQSLLDRNHYAADDIREKLRNLENDKTHLLTLWEERRILYEQCMDLQLFYRD 720
                   GQ L+D NHYA+D I+ +   +      L+   +++    ++    Q F R 
Sbjct: 630 RMDEITSTGQDLIDANHYASDRIQARTDEIVQLWDALVAATDKKGTKLQEASQQQQFNRT 689

Query: 721 TEQADTWMAKQEAFLSNEDLGDSLDSVEALIKKHEDFEKSLAAQEEKIKALDDLLKVNTM 780
            E  + W+++ E  L +ED G  L SV+ L KKH   E  +A+ +++I  +         
Sbjct: 690 VEDVELWLSEVEGQLLSEDYGKDLTSVQNLQKKHALLEADVASHQDRIDGI--------- 740

Query: 781 QIKALDEFATKLIEGQHYAADDVAQRRDLLLKRRAGLLEKSARRRAILEDSYKFQQFERD 840
            + A + F    +E  H+ AD++  +++ L +R A L      R+  L DS + QQ  RD
Sbjct: 741 -VHAAETF----VERGHFDADNIKAKQEALSERYAALQRPMGIRKQRLLDSLQVQQLFRD 795

Query: 841 CDETKSWVTEKLKFANDDNY-LDPTNLNGKVQKHQNFEQELNANKTRMDEITSTGQELLE 899
            ++ ++W+ EK   A   N   D   +   ++KHQ    E+N ++ R+  +   GQ++L 
Sbjct: 796 IEDEEAWIREKEPVAASTNRGRDLIGVQNLIKKHQAVLAEINNHENRVAAVCQVGQQMLN 855

Query: 900 ANHYASDKIRQRMEQIVHLWESLATATEKKGNKLQEASQQQGFNRTIEDIELWLSEIEGQ 959
             H+A D I+QR+  +   W  L     ++   L+++ Q   +     + E W+ E E  
Sbjct: 856 DGHFAKDDIKQRIAILKDHWNQLKNKALQRKQDLEDSLQAHQYFADANEAESWIKEKEPI 915

Query: 960 LMSEDYGKDLTSVQNLQKKHALLEADVASHLDRIESVK 997
           + S DYGKD  S + L KKH  L +D+ +    I ++K
Sbjct: 916 VTSTDYGKDEDSSEALLKKHEALVSDLEAFDSTISALK 953

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|195336722|ref|XP_002034982.1| GM14169 [Drosophila sechellia] gi|194128075|gb|EDW50118.1| GM14169 [Drosophila sechellia] Back     alignment and taxonomy information
>gi|195490569|ref|XP_002093194.1| GE20915 [Drosophila yakuba] gi|194179295|gb|EDW92906.1| GE20915 [Drosophila yakuba] Back     alignment and taxonomy information
>gi|195587054|ref|XP_002083280.1| GD13438 [Drosophila simulans] gi|194195289|gb|EDX08865.1| GD13438 [Drosophila simulans] Back     alignment and taxonomy information
>gi|442629558|ref|NP_001261286.1| alpha spectrin, isoform B [Drosophila melanogaster] gi|440215153|gb|AGB93981.1| alpha spectrin, isoform B [Drosophila melanogaster] Back     alignment and taxonomy information
>gi|442629560|ref|NP_001261287.1| alpha spectrin, isoform C [Drosophila melanogaster] gi|440215154|gb|AGB93982.1| alpha spectrin, isoform C [Drosophila melanogaster] Back     alignment and taxonomy information
>gi|158489|gb|AAA28907.1| alpha-spectrin [Drosophila melanogaster] Back     alignment and taxonomy information
>gi|17136504|ref|NP_476739.1| alpha spectrin, isoform A [Drosophila melanogaster] gi|14424461|sp|P13395.2|SPTCA_DROME RecName: Full=Spectrin alpha chain gi|7292157|gb|AAF47569.1| alpha spectrin, isoform A [Drosophila melanogaster] Back     alignment and taxonomy information
>gi|194864980|ref|XP_001971201.1| GG14560 [Drosophila erecta] gi|190652984|gb|EDV50227.1| GG14560 [Drosophila erecta] Back     alignment and taxonomy information
>gi|195125353|ref|XP_002007143.1| GI12773 [Drosophila mojavensis] gi|193918752|gb|EDW17619.1| GI12773 [Drosophila mojavensis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1032
FB|FBgn0250789 2415 alpha-Spec "alpha Spectrin" [D 0.563 0.240 0.814 8.6e-303
WB|WBGene00004951 2432 spc-1 [Caenorhabditis elegans 0.578 0.245 0.602 1.8e-238
ZFIN|ZDB-GENE-051113-60 2480 spna2 "spectrin alpha 2" [Dani 0.834 0.347 0.473 1.4e-220
UNIPROTKB|E9PSZ3 2477 Sptan1 "Spectrin alpha chain, 0.964 0.401 0.440 1.5e-195
UNIPROTKB|F1RR78 2452 SPTAN1 "Uncharacterized protei 0.964 0.405 0.443 3e-195
UNIPROTKB|E1BFB0 2472 SPTAN1 "Uncharacterized protei 0.964 0.402 0.442 4.9e-195
RGD|621714 2472 Sptan1 "spectrin, alpha, non-e 0.964 0.402 0.441 6.3e-195
UNIPROTKB|J9P2H0 2452 SPTAN1 "Uncharacterized protei 0.964 0.405 0.442 6.3e-195
UNIPROTKB|E9PU22 2478 Sptan1 "Spectrin alpha chain, 0.964 0.401 0.441 6.3e-195
UNIPROTKB|F1PAP5 2477 SPTAN1 "Uncharacterized protei 0.964 0.401 0.442 6.3e-195
FB|FBgn0250789 alpha-Spec "alpha Spectrin" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 2434 (861.9 bits), Expect = 8.6e-303, Sum P(2) = 8.6e-303
 Identities = 474/582 (81%), Positives = 518/582 (89%)

Query:     1 MDQITVKEVKILETANDIQERREQVLNRYADFKSEARSKREKLEDSRRFQYFKRDADELE 60
             M+  T KEVKILET  DIQERREQVL+RY DFK E R KREKLEDSRRFQYFKRDADELE
Sbjct:     1 MENFTPKEVKILETVEDIQERREQVLSRYNDFKIETRQKREKLEDSRRFQYFKRDADELE 60

Query:    61 SWIYEKLQAASDESYKETTNLQAKIQKHQAFEAEVAAHSNAIVVLDNTGKEMINQNHFAS 120
             SWI+EKLQAAS+ESY++ TNLQAKIQKHQAFEAEV+AHSNAIV LDNTG+EMINQ HFAS
Sbjct:    61 SWIHEKLQAASEESYRDPTNLQAKIQKHQAFEAEVSAHSNAIVSLDNTGQEMINQQHFAS 120

Query:   121 EVIXXXXXXXXXXXXXXXXXXAEKGMKLQQALVLVQFIRQCDEVMFWINDKEAFVTADEF 180
             E I                  AEKG+KLQQALVLVQF+RQC+EVMFWI DKE FVTADEF
Sbjct:   121 ESIQVRLDELHKLWELLLSRLAEKGLKLQQALVLVQFLRQCEEVMFWIKDKETFVTADEF 180

Query:   181 GADLEHVEVLQRKFDEFQKDMASQEYRVTEVNQLADKLVLEGHPERETIVRRKEELSEAW 240
             G DLEHVEVLQRKFDEFQKDMASQEYRVTEVNQLADKLV +GHPER+TI +RKEEL+EAW
Sbjct:   181 GQDLEHVEVLQRKFDEFQKDMASQEYRVTEVNQLADKLVQDGHPERDTITKRKEELNEAW 240

Query:   241 MRLKQLALMRQEKLFGAHEIQRFNRDADETVAWIAEKDAVLSSDEYGRDLASVQTLQRKH 300
              RLKQLA++RQEKLFGAHEIQRFNRDADETVAWIAEKD VLSSD+YGRDLASVQ LQRKH
Sbjct:   241 QRLKQLAIVRQEKLFGAHEIQRFNRDADETVAWIAEKDVVLSSDDYGRDLASVQALQRKH 300

Query:   301 EGVERDLAALEDKVSTLGAEADRLCGIHSDHGDQIQAKRAEIVEYWERLTGKAKGRKQKL 360
             EGVERDLAALEDKVSTLGAEA RLC IH+DH DQI+ K+AEI  YW+ LT KA+ RKQKL
Sbjct:   301 EGVERDLAALEDKVSTLGAEAQRLCSIHADHSDQIRDKQAEIANYWQSLTTKARERKQKL 360

Query:   361 DESYYLHRFLADYRDLISWVSDMKAIISADELAKDVAGAEALLERHQEHKGEIDAREDSF 420
             DESYYLHRFLAD+RDL+SW++ MKAIISADELAKDVAGAEALLERHQEHKGEIDAREDSF
Sbjct:   361 DESYYLHRFLADFRDLVSWINGMKAIISADELAKDVAGAEALLERHQEHKGEIDAREDSF 420

Query:   421 RGTADAGQSLLDRNHYAADDIREKLRNLENDKTHLLTLWEERRILYEQCMDLQLFYRDTE 480
             + T ++GQ LL+R HYAA +I+EKL  LENDK+ LL+LWE+RRILYEQCMDLQLFYRDTE
Sbjct:   421 KLTTESGQKLLEREHYAAAEIQEKLAALENDKSSLLSLWEDRRILYEQCMDLQLFYRDTE 480

Query:   481 QADTWMAKQEAFLSNEDLGDSLDSVEALIKKHEDFEKSLAAQEEKIKALDEFATKLIEGQ 540
             QADTWMAKQEAFL+NEDLGDSLDSVEALIKKHEDFEKSLAAQEEKIKALD FATKLI+GQ
Sbjct:   481 QADTWMAKQEAFLANEDLGDSLDSVEALIKKHEDFEKSLAAQEEKIKALDIFATKLIDGQ 540

Query:   541 HYAADDVAQRRDLLLKRRAGLLEKSARRRAILEDSYKFQQFE 582
             HYAADDVAQRR +LL RRA L EKS++RR +LEDS ++QQFE
Sbjct:   541 HYAADDVAQRRQMLLARRAALQEKSSKRRQLLEDSNRYQQFE 582
GO:0007308 "oocyte construction" evidence=IMP
GO:0002168 "instar larval development" evidence=NAS
GO:0007294 "germarium-derived oocyte fate determination" evidence=IMP;TAS
GO:0008302 "female germline ring canal formation, actin assembly" evidence=TAS
GO:0045169 "fusome" evidence=IDA
GO:0030727 "germarium-derived female germ-line cyst formation" evidence=IMP
GO:0045170 "spectrosome" evidence=IDA;TAS
GO:0005886 "plasma membrane" evidence=IDA
GO:0007417 "central nervous system development" evidence=IMP
GO:0048134 "germ-line cyst formation" evidence=TAS
GO:0045478 "fusome organization" evidence=TAS
GO:0008360 "regulation of cell shape" evidence=NAS
GO:0016337 "cell-cell adhesion" evidence=NAS
GO:0008091 "spectrin" evidence=ISS;NAS
GO:0003779 "actin binding" evidence=ISS;IDA;NAS
GO:0005516 "calmodulin binding" evidence=NAS
GO:0030707 "ovarian follicle cell development" evidence=TAS
GO:0005938 "cell cortex" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0008017 "microtubule binding" evidence=IDA
GO:0007009 "plasma membrane organization" evidence=TAS
GO:0008092 "cytoskeletal protein binding" evidence=ISS
GO:0030721 "spectrosome organization" evidence=TAS
GO:0007274 "neuromuscular synaptic transmission" evidence=IMP
GO:0007010 "cytoskeleton organization" evidence=ISS
GO:0005856 "cytoskeleton" evidence=ISS
GO:0005509 "calcium ion binding" evidence=ISS
GO:0050807 "regulation of synapse organization" evidence=IMP
GO:0007026 "negative regulation of microtubule depolymerization" evidence=IMP
GO:0042062 "long-term strengthening of neuromuscular junction" evidence=IMP
GO:0016199 "axon midline choice point recognition" evidence=IGI
GO:0048790 "maintenance of presynaptic active zone structure" evidence=IDA
GO:0005811 "lipid particle" evidence=IDA
GO:0031594 "neuromuscular junction" evidence=IDA
GO:0016323 "basolateral plasma membrane" evidence=IDA
WB|WBGene00004951 spc-1 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-051113-60 spna2 "spectrin alpha 2" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|E9PSZ3 Sptan1 "Spectrin alpha chain, non-erythrocytic 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1RR78 SPTAN1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|E1BFB0 SPTAN1 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
RGD|621714 Sptan1 "spectrin, alpha, non-erythrocytic 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|J9P2H0 SPTAN1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|E9PU22 Sptan1 "Spectrin alpha chain, non-erythrocytic 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1PAP5 SPTAN1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P13395SPTCA_DROMENo assigned EC number0.59440.91470.3908yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1032
cd00176213 cd00176, SPEC, Spectrin repeats, found in several 7e-36
cd00176213 cd00176, SPEC, Spectrin repeats, found in several 7e-36
cd00176213 cd00176, SPEC, Spectrin repeats, found in several 9e-36
cd00176213 cd00176, SPEC, Spectrin repeats, found in several 8e-34
cd00176213 cd00176, SPEC, Spectrin repeats, found in several 4e-33
cd00176213 cd00176, SPEC, Spectrin repeats, found in several 3e-32
cd00176213 cd00176, SPEC, Spectrin repeats, found in several 1e-31
cd00176213 cd00176, SPEC, Spectrin repeats, found in several 7e-30
pfam00435105 pfam00435, Spectrin, Spectrin repeat 4e-20
smart00150101 smart00150, SPEC, Spectrin repeats 1e-18
pfam00435105 pfam00435, Spectrin, Spectrin repeat 3e-18
smart00150101 smart00150, SPEC, Spectrin repeats 4e-18
smart00150101 smart00150, SPEC, Spectrin repeats 7e-18
pfam00435105 pfam00435, Spectrin, Spectrin repeat 1e-17
pfam00435105 pfam00435, Spectrin, Spectrin repeat 3e-17
smart00150101 smart00150, SPEC, Spectrin repeats 6e-17
pfam00435105 pfam00435, Spectrin, Spectrin repeat 7e-17
smart00150101 smart00150, SPEC, Spectrin repeats 7e-17
pfam00435105 pfam00435, Spectrin, Spectrin repeat 3e-16
smart00150101 smart00150, SPEC, Spectrin repeats 3e-16
cd00176213 cd00176, SPEC, Spectrin repeats, found in several 4e-16
pfam00435105 pfam00435, Spectrin, Spectrin repeat 9e-16
smart00150101 smart00150, SPEC, Spectrin repeats 2e-15
smart00150101 smart00150, SPEC, Spectrin repeats 5e-15
smart00150101 smart00150, SPEC, Spectrin repeats 5e-15
pfam00435105 pfam00435, Spectrin, Spectrin repeat 1e-13
pfam00435105 pfam00435, Spectrin, Spectrin repeat 1e-13
>gnl|CDD|238103 cd00176, SPEC, Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; the repeats are independent folding units; tandem repeats are found in differing numbers and arrange in an antiparallel manner to form dimers; the repeats are defined by a characteristic tryptophan (W) residue in helix A and a leucine (L) at the carboxyl end of helix C and separated by a linker of 5 residues; two copies of the repeat are present here Back     alignment and domain information 
 Score =  134 bits (340), Expect = 7e-36
 Identities = 84/213 (39%), Positives = 137/213 (64%), Gaps = 2/213 (0%)

Query: 48  RFQYFKRDADELESWIYEKLQAASDESYKET-TNLQAKIQKHQAFEAEVAAHSNAIVVLD 106
           + Q F RDADELE+W+ EK +  S   Y +   +++A ++KH+A EAE+AAH   +  L+
Sbjct: 1   KLQQFLRDADELEAWLSEKEELLSSTDYGDDLESVEALLKKHEALEAELAAHEERVEALN 60

Query: 107 NTGKEMINQNHFASEVIRKRLEELHRLWELLLSKLAEKGMKLQQALVLVQFIRQCDEVMF 166
             G+++I + H  +E I++RLEEL++ WE L     E+  +L++AL L QF R  D++  
Sbjct: 61  ELGEQLIEEGHPDAEEIQERLEELNQRWEELRELAEERRQRLEEALDLQQFFRDADDLEQ 120

Query: 167 WINDKEAFVTADEFGADLEHVEVLQRKFDEFQKDMASQEYRVTEVNQLADKLVLEGHPER 226
           W+ +KEA + +++ G DLE VE L +K  E ++++ + E R+  +N+LA++L+ EGHP+ 
Sbjct: 121 WLEEKEAALASEDLGKDLESVEELLKKHKELEEELEAHEPRLKSLNELAEELLEEGHPDA 180

Query: 227 ETIVRRK-EELSEAWMRLKQLALMRQEKLFGAH 258
           +  +  K EEL+E W  L +LA  RQ+KL  A 
Sbjct: 181 DEEIEEKLEELNERWEELLELAEERQKKLEEAL 213

Length = 213
>gnl|CDD|238103 cd00176, SPEC, Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; the repeats are independent folding units; tandem repeats are found in differing numbers and arrange in an antiparallel manner to form dimers; the repeats are defined by a characteristic tryptophan (W) residue in helix A and a leucine (L) at the carboxyl end of helix C and separated by a linker of 5 residues; two copies of the repeat are present here Back     alignment and domain information
>gnl|CDD|238103 cd00176, SPEC, Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; the repeats are independent folding units; tandem repeats are found in differing numbers and arrange in an antiparallel manner to form dimers; the repeats are defined by a characteristic tryptophan (W) residue in helix A and a leucine (L) at the carboxyl end of helix C and separated by a linker of 5 residues; two copies of the repeat are present here Back     alignment and domain information
>gnl|CDD|238103 cd00176, SPEC, Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; the repeats are independent folding units; tandem repeats are found in differing numbers and arrange in an antiparallel manner to form dimers; the repeats are defined by a characteristic tryptophan (W) residue in helix A and a leucine (L) at the carboxyl end of helix C and separated by a linker of 5 residues; two copies of the repeat are present here Back     alignment and domain information
>gnl|CDD|238103 cd00176, SPEC, Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; the repeats are independent folding units; tandem repeats are found in differing numbers and arrange in an antiparallel manner to form dimers; the repeats are defined by a characteristic tryptophan (W) residue in helix A and a leucine (L) at the carboxyl end of helix C and separated by a linker of 5 residues; two copies of the repeat are present here Back     alignment and domain information
>gnl|CDD|238103 cd00176, SPEC, Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; the repeats are independent folding units; tandem repeats are found in differing numbers and arrange in an antiparallel manner to form dimers; the repeats are defined by a characteristic tryptophan (W) residue in helix A and a leucine (L) at the carboxyl end of helix C and separated by a linker of 5 residues; two copies of the repeat are present here Back     alignment and domain information
>gnl|CDD|238103 cd00176, SPEC, Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; the repeats are independent folding units; tandem repeats are found in differing numbers and arrange in an antiparallel manner to form dimers; the repeats are defined by a characteristic tryptophan (W) residue in helix A and a leucine (L) at the carboxyl end of helix C and separated by a linker of 5 residues; two copies of the repeat are present here Back     alignment and domain information
>gnl|CDD|238103 cd00176, SPEC, Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; the repeats are independent folding units; tandem repeats are found in differing numbers and arrange in an antiparallel manner to form dimers; the repeats are defined by a characteristic tryptophan (W) residue in helix A and a leucine (L) at the carboxyl end of helix C and separated by a linker of 5 residues; two copies of the repeat are present here Back     alignment and domain information
>gnl|CDD|215918 pfam00435, Spectrin, Spectrin repeat Back     alignment and domain information
>gnl|CDD|197544 smart00150, SPEC, Spectrin repeats Back     alignment and domain information
>gnl|CDD|215918 pfam00435, Spectrin, Spectrin repeat Back     alignment and domain information
>gnl|CDD|197544 smart00150, SPEC, Spectrin repeats Back     alignment and domain information
>gnl|CDD|197544 smart00150, SPEC, Spectrin repeats Back     alignment and domain information
>gnl|CDD|215918 pfam00435, Spectrin, Spectrin repeat Back     alignment and domain information
>gnl|CDD|215918 pfam00435, Spectrin, Spectrin repeat Back     alignment and domain information
>gnl|CDD|197544 smart00150, SPEC, Spectrin repeats Back     alignment and domain information
>gnl|CDD|215918 pfam00435, Spectrin, Spectrin repeat Back     alignment and domain information
>gnl|CDD|197544 smart00150, SPEC, Spectrin repeats Back     alignment and domain information
>gnl|CDD|215918 pfam00435, Spectrin, Spectrin repeat Back     alignment and domain information
>gnl|CDD|197544 smart00150, SPEC, Spectrin repeats Back     alignment and domain information
>gnl|CDD|238103 cd00176, SPEC, Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; the repeats are independent folding units; tandem repeats are found in differing numbers and arrange in an antiparallel manner to form dimers; the repeats are defined by a characteristic tryptophan (W) residue in helix A and a leucine (L) at the carboxyl end of helix C and separated by a linker of 5 residues; two copies of the repeat are present here Back     alignment and domain information
>gnl|CDD|215918 pfam00435, Spectrin, Spectrin repeat Back     alignment and domain information
>gnl|CDD|197544 smart00150, SPEC, Spectrin repeats Back     alignment and domain information
>gnl|CDD|197544 smart00150, SPEC, Spectrin repeats Back     alignment and domain information
>gnl|CDD|197544 smart00150, SPEC, Spectrin repeats Back     alignment and domain information
>gnl|CDD|215918 pfam00435, Spectrin, Spectrin repeat Back     alignment and domain information
>gnl|CDD|215918 pfam00435, Spectrin, Spectrin repeat Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 1032
KOG0517|consensus 2473 100.0
KOG0517|consensus 2473 100.0
KOG0040|consensus 2399 100.0
KOG0040|consensus 2399 100.0
cd00176213 SPEC Spectrin repeats, found in several proteins i 99.79
cd00176213 SPEC Spectrin repeats, found in several proteins i 99.79
KOG4286|consensus 966 99.59
KOG4286|consensus966 99.54
smart00150101 SPEC Spectrin repeats. 99.14
PF00435105 Spectrin: Spectrin repeat; InterPro: IPR002017 Spe 99.13
smart00150101 SPEC Spectrin repeats. 99.12
PF00435105 Spectrin: Spectrin repeat; InterPro: IPR002017 Spe 99.09
TIGR00606 1311 rad50 rad50. This family is based on the phylogeno 98.78
KOG4240|consensus 1025 98.76
PRK04863 1486 mukB cell division protein MukB; Provisional 98.36
KOG4240|consensus 1025 98.31
TIGR00606 1311 rad50 rad50. This family is based on the phylogeno 98.3
PF121281201 DUF3584: Protein of unknown function (DUF3584); In 98.27
KOG0161|consensus1930 98.26
PF12128 1201 DUF3584: Protein of unknown function (DUF3584); In 98.25
KOG4674|consensus 1822 98.06
KOG0994|consensus1758 98.0
PRK04863 1486 mukB cell division protein MukB; Provisional 97.55
PF06160560 EzrA: Septation ring formation regulator, EzrA ; I 97.27
KOG0161|consensus 1930 97.18
KOG0994|consensus1758 97.0
PF06160560 EzrA: Septation ring formation regulator, EzrA ; I 96.81
PRK04778569 septation ring formation regulator EzrA; Provision 96.57
PRK04778569 septation ring formation regulator EzrA; Provision 96.46
PRK02224880 chromosome segregation protein; Provisional 95.89
PF08580683 KAR9: Yeast cortical protein KAR9; InterPro: IPR01 95.75
PRK02224880 chromosome segregation protein; Provisional 95.42
KOG4674|consensus 1822 93.16
PF08580683 KAR9: Yeast cortical protein KAR9; InterPro: IPR01 91.48
PRK03918880 chromosome segregation protein; Provisional 90.72
PF135141111 AAA_27: AAA domain 89.23
PF14643473 DUF4455: Domain of unknown function (DUF4455) 88.94
PF06008264 Laminin_I: Laminin Domain I; InterPro: IPR009254 L 88.28
PRK03918880 chromosome segregation protein; Provisional 85.79
PF06008264 Laminin_I: Laminin Domain I; InterPro: IPR009254 L 84.98
PF04912388 Dynamitin: Dynamitin ; InterPro: IPR006996 Dynamit 82.92
>KOG0517|consensus Back     alignment and domain information 
Probab=100.00  E-value=2.2e-95  Score=828.54  Aligned_cols=995  Identities=30%  Similarity=0.505  Sum_probs=950.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHH-------HHHHH-HHHHHHhHHHHHHHHHHHHHHhccCCC-CChhhHHHHHHhhHHHH
Q psy6936          22 REQVLNRYADFKSEARSKREKL-------EDSRR-FQYFKRDADELESWIYEKLQAASDESY-KETTNLQAKIQKHQAFE   92 (1032)
Q Consensus        22 l~~l~~r~~~l~~~~~~r~~~L-------~~~~~-~~~f~~~~~~~~~Wl~~~~~~l~~~~~-~~~~~~~~~l~~~~~l~   92 (1032)
                      +.+|+.-|..|...=..|.--|       +.+-. ..+|..++..-.+||.+....|+++.+ .++..|++.+++|+++.
T Consensus       382 i~DInkAW~~LE~AEheRe~ALr~ELiRQEKLEqLA~RFdrKAamREtwL~enqrlvsqdnfg~~LaaVEAa~KKheAIe  461 (2473)
T KOG0517|consen  382 ISDINKAWERLEKAEHERELALRAELIRQEKLEQLARRFDRKAAMRETWLKENQRLVSQDNFGYDLAAVEAALKKHEAIE  461 (2473)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCccHHHHHHHHHHhhhhh
Confidence            6789999999988776665444       33322 368999999999999999999999887 68999999999999999


Q ss_pred             HHHHhhHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHhHHHHHhHHhhh
Q psy6936          93 AEVAAHSNAIVVLDNTGKEMINQNHFASEVIRKRLEELHRLWELLLSKLAEKGMKLQQALVLVQFIRQCDEVMFWINDKE  172 (1032)
Q Consensus        93 ~el~~~~~~v~~l~~~~~~L~~~~~~~~~~i~~~l~~L~~~w~~L~~~~~~r~~~L~~~l~~~~f~~~~~~~~~wl~~~e  172 (1032)
                      .+|-+++.++..|...++.|-..++++...|..+-.++-.+|..|..++..|+.+|+..+.+...++++..+.+||++.+
T Consensus       462 tDI~AyeeRvqal~ava~eL~~E~YHd~~rV~~r~~~V~~~W~~Ll~lL~arR~rL~~~~~Lqklfqem~~~~d~meElk  541 (2473)
T KOG0517|consen  462 TDILAYEERVQALVAVADELEAENYHDIKRVAARKDNVLRLWTYLLELLEARRQRLEQMLALQKLFQEMLYTSDWMEELK  541 (2473)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhcccccCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CCC-CchHHHHHHHHHHHHHHHHHHHHHH
Q psy6936         173 AFVTADEFGADLEHVEVLQRKFDEFQKDMASQEYRVTEVNQLADKLVLE--GHP-ERETIVRRKEELSEAWMRLKQLALM  249 (1032)
Q Consensus       173 ~~l~~~~~~~d~~~~~~~l~~~~~l~~~l~~~~~~l~~l~~~~~~l~~~--~~~-~~~~i~~~~~~l~~rw~~l~~~~~~  249 (1032)
                      ..+.+.++|..+-.|+..+++|.-+..+|..+...|..++..+..+...  ..| ++..|..+++.|...|..|...+..
T Consensus       542 ~~l~S~d~GkHL~gVedLLQkH~LlEadIn~~gerv~~~~a~a~~f~~~~~~~~cdp~vi~~R~~~le~~y~eL~~laa~  621 (2473)
T KOG0517|consen  542 QQLLSRDVGKHLLGVEDLLQKHDLLEADINAQGERVKALNAQALRFDSPKEYKPCDPQVIQERVAHLEQCYQELVELAAA  621 (2473)
T ss_pred             HHHHhHHHHHHHhhHHHHHHhhhhHHhHHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999763  223 5669999999999999999999999


Q ss_pred             HHHHHHhhHHHHHHHHhHHHHHHHHHHHhhhcCccccCCCHHHHHHHHHHhhhHHHHHHHhHHHHHHHHHHHHHhhhcCC
Q psy6936         250 RQEKLFGAHEIQRFNRDADETVAWIAEKDAVLSSDEYGRDLASVQTLQRKHEGVERDLAALEDKVSTLGAEADRLCGIHS  329 (1032)
Q Consensus       250 r~~~Le~~~~~~~f~~~~~~~~~Wl~~~e~~l~~~~~~~d~~~~~~~l~~~~~l~~ei~~~~~~l~~l~~~~~~L~~~~~  329 (1032)
                      |...||....+++|..++++...||.+++..+++.+.|.|+..|...+.+|+.|+.++..+.+.+..+...|..|+..++
T Consensus       622 RRarLE~sr~l~~F~~d~~EeEaWlkEkeqi~~sa~~g~DLs~v~~ll~kHKalE~E~~~~~a~~~~~~~~G~~Lvae~~  701 (2473)
T KOG0517|consen  622 RRARLEESRRLWQFLWDVEEEEAWLKEKEQILSSADTGRDLSSVLRLLQKHKALEDEMRGRDAHLKQMIREGEELVAEGH  701 (2473)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCC
Confidence            99999999999999999999999999999999998999999999999999999999999999999999999999999999


Q ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCHHHHHHHHHHHHhh
Q psy6936         330 DHGDQIQAKRAEIVEYWERLTGKAKGRKQKLDESYYLHRFLADYRDLISWVSDMKAIISADELAKDVAGAEALLERHQEH  409 (1032)
Q Consensus       330 ~~~~~i~~~~~~l~~~w~~l~~~~~~r~~~L~~~~~~~~f~~~~~~l~~Wl~~~e~~l~~~~~~~d~~~~~~~l~~~~~l  409 (1032)
                      ++.+.|..++..+..+|+.|..++..|..+|+++..+++|+.+.+++.+||.+....+++.+++.|-.+++.++++|.++
T Consensus       702 pg~~~i~~R~~~i~~~W~~L~~l~~~r~~rL~~A~~~~QffaDAdd~~sWl~d~~rlvss~d~G~DE~saq~LlkrH~~l  781 (2473)
T KOG0517|consen  702 PGSDQIQERAAEIREQWQRLEALVAGRGRRLQEARELYQFFADADDAESWLRDALRLVSSEDVGHDEASAQALLKRHRDL  781 (2473)
T ss_pred             CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhccchhcCCchHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhHHHHhhhhHHHHHHhhhhhhhcCCCChHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHH
Q psy6936         410 KGEIDAREDSFRGTADAGQSLLDRNHYAADDIRE---KLRNLENDKTHLLTLWEERRILYEQCMDLQLFYRDTEQADTWM  486 (1032)
Q Consensus       410 ~~~l~~~~~~~~~l~~~~~~L~~~~~~~~~~i~~---~l~~l~~~w~~l~~~~~~r~~~L~~~~~~~~f~~~~~~l~~WL  486 (1032)
                      ..+|..+.+.+..+...+..|.... |..|.|..   ++..+.+.|..|.....-|+..|+.++.+..|+.+|..+..|+
T Consensus       782 ~~El~a~~~~i~~L~eQa~~l~~~~-~e~p~V~~~~~R~~~i~q~Y~El~~lA~lRrq~L~dalaLy~~~se~d~~ElWi  860 (2473)
T KOG0517|consen  782 EEELRAYRGDIDRLEEQASALPQES-PEGPEVRQPLQRQDTISQDYEELQELAQLRRQRLEDALALYGFYSECDACELWI  860 (2473)
T ss_pred             HHHHHHhhhHHHHHHHHHHhhcccc-CCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHH
Confidence            9999999999999999999998763 45666666   9999999999999999999999999999999999999999999


Q ss_pred             HHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHHHHHHHH
Q psy6936         487 AKQEAFLSNEDLGDSLDSVEALIKKHEDFEKSLAAQEEKIKALDEFATKLIEGQHYAADDVAQRRDLLLKRRAGLLEKSA  566 (1032)
Q Consensus       487 ~~~e~~l~~~~~~~~~~~~~~~l~~~~~l~~el~~~~~~~~~l~~~~~~L~~~~~~~~~~i~~~~~~l~~r~~~l~~~~~  566 (1032)
                      .+.+..|....+|.++++++....+|+.|..+|......|..|+..+++|...+|+.++.|..+.+.||.+|+.|..++.
T Consensus       861 ~Eke~~L~~m~~~~~~E~vev~q~rFe~l~~eM~~~~~~v~~Vn~~a~qL~~~ghp~sd~I~~~Q~~Ln~rW~~l~~l~~  940 (2473)
T KOG0517|consen  861 KEKEKWLATMSPPDSLEDVEVMQHRFEKLEQEMNTLAGRVAEVNDIARQLLEVGHPNSDEILARQDKLNQRWQQLRELVD  940 (2473)
T ss_pred             HHHHHHHhccCCCCChhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999888899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhHhhhhHH----------------------------------------------------------------
Q psy6936         567 RRRAILEDSYKFQQFE----------------------------------------------------------------  582 (1032)
Q Consensus       567 ~r~~~L~~~~~~~~~~----------------------------------------------------------------  582 (1032)
                      +|+..|+.+..++.|.                                                                
T Consensus       941 qk~~~L~~a~~V~~f~~eC~et~~wi~dK~~~~e~t~~~~~Dl~gv~alqrrL~~lErdl~aie~kv~~L~~ea~~v~~~ 1020 (2473)
T KOG0517|consen  941 QKKVALESALRVETFHLECEETRVWIRDKTRVLESTDRLGNDLAGVMALQRRLQGLERDLAAIEAKVAALEKEANKVEEE 1020 (2473)
T ss_pred             HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhccccCcchHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhhc
Confidence            9999998887766553                                                                


Q ss_pred             -------------HHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHhHHHHHHHHHHHHHHhchhhhccCHHHHHHHHHHHH
Q psy6936         583 -------------EIVEYWERLTGKAKGRKQKLDESYYLHRFLADYRDLISWVSDMKAIISADELAKDVAGAEALLERHQ  649 (1032)
Q Consensus       583 -------------~l~~~w~~l~~~~~~r~~~L~~~~~~~~f~~~~~~l~~Wl~~~e~~l~~~~~~~~~~~~~~~l~~~~  649 (1032)
                                   +|..-|..|...+.+|...++.+...+.|..++..|..|+..+...+.+...|.+.+.++..|.+|.
T Consensus      1021 ~Paea~~i~~r~~el~~~w~~l~~~~~~~~~~l~ea~~lQ~Fl~dld~f~~Wl~~tq~~~~see~p~~l~eAe~LL~qH~ 1100 (2473)
T KOG0517|consen 1021 HPAEAQAINARIAELQALWEQLQQRLQEREERLEEAGGLQRFLRDLDDFQAWLESTQTQVASEEGPVDLAEAEQLLKQHA 1100 (2473)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHH
Confidence                         7889999999999999999999999999999999999999999999999889999999999999999


Q ss_pred             hhHHHHHhchhhHHHHHHHHHhHhhc-CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHH
Q psy6936         650 EHKGEIDAREDSFRGTADAGQSLLDR-NHYAADDIREKLRNLENDKTHLLTLWEERRILYEQCMDLQLFYRDTEQADTWM  728 (1032)
Q Consensus       650 ~l~~el~~~~~~~~~l~~~g~~L~~~-~~~~~~~i~~~l~~l~~~w~~l~~~~~~r~~~Le~~l~~~~f~~~~~~l~~WL  728 (1032)
                      ++..+|+.++..|..+.+.|+.+... ..|....+.++|..|.+-|..|...|..|+..|.+++.++.|.++..++..-+
T Consensus      1101 ~l~eEI~~~~e~y~~~~~~ge~~~~g~~~p~~~~l~erL~~L~~gw~eL~~mWe~Rq~~L~Q~l~lQ~F~Rda~q~ea~l 1180 (2473)
T KOG0517|consen 1101 ALREEIDGYQEDYQRMRALGETVADGQTDPQYLFLRERLQALGTGWEELHRMWENRQKWLSQGLDLQLFLRDARQAEATL 1180 (2473)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhccCCCchHhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999977753 23445679999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhhcCCcCCCCHHHHHHHHHhHHHHHHHHHHHHHHHHHhhHHhhhhhhhhhhHHHHHHHhhhcCCCChhHHHHHHH
Q psy6936         729 AKQEAFLSNEDLGDSLDSVEALIKKHEDFEKSLAAQEEKIKALDDLLKVNTMQIKALDEFATKLIEGQHYAADDVAQRRD  808 (1032)
Q Consensus       729 ~~~e~~L~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~L~~~~~~~~~~i~~~~~  808 (1032)
                      ...|..|+-..+|++++.++..+++|.+|...+....+++..+              ...|..|++.+|++++.|+++++
T Consensus      1181 ~~qE~~L~~d~lp~sle~ae~~LKrh~DF~~tm~a~~~ki~a~--------------~~~gd~Lv~~~h~~s~~I~ek~~ 1246 (2473)
T KOG0517|consen 1181 SNQEAFLSHDNLPDSLEEAEALLKRHRDFLTTMDANDEKIEAL--------------VDTGDKLVSEGHIDSDKIREKAQ 1246 (2473)
T ss_pred             hhHHHHHhcccccccHHHHHHHHHHHHHHHHHHhcchHHHHHH--------------HHHHHHHHhcCCccHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999              99999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhhhHHHHHHHhhhhhccccCCCCcchhHHHHHhhHHHHHHHHhchHhHH
Q psy6936         809 LLLKRRAGLLEKSARRRAILEDSYKFQQFERDCDETKSWVTEKLKFANDDNYLDPTNLNGKVQKHQNFEQELNANKTRMD  888 (1032)
Q Consensus       809 ~l~~r~~~l~~~~~~r~~~Le~~~~~~~f~~~~~~l~~Wl~~~~~~l~~~~~~~~~~l~~~l~~~~~l~~el~~~~~~~~  888 (1032)
                      .+..||..+...+.++...|..++.++.|.++|+++..||.++..++.+++|.++..|..++.+|++|++||.++++.++
T Consensus      1247 ~I~~r~~~nr~rA~q~~~~L~~slelQ~flqd~~EL~~Wi~EK~l~a~Desy~~~~nl~~k~~kHqAFeaELaank~~l~ 1326 (2473)
T KOG0517|consen 1247 SILARRKANRERAQQRLRKLKDSLELQEFLQDCDELKLWIEEKMLMAQDESYRDARNLHSKWLKHQAFEAELAANKEWLE 1326 (2473)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHHHhChHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHhHHHHHhhhccccCCCC
Q psy6936         889 EITSTGQELLEANHYASDKIRQRMEQIVHLWESLATATEKKGNKLQEASQQQGFNRTIEDIELWLSEIEGQLMSEDYGKD  968 (1032)
Q Consensus       889 ~v~~~g~~l~~~~~~~~~~i~~~l~~l~~~w~~l~~~~~~~~~~L~~a~~~~~~~~~~~~l~~wL~~~e~~L~~~~~~~~  968 (1032)
                      .|...|+.|+...|...+.|..++..|+.+|++|...+.++.++|.+|.....|...+..+.+||.+++.+|.+.|+|.|
T Consensus      1327 ~i~~eG~~L~~ekpe~~~~V~~kl~~L~~~W~~Le~~t~~Kg~~L~qA~~q~~~~qs~~D~~~~l~~le~qL~S~D~G~D 1406 (2473)
T KOG0517|consen 1327 KIEKEGQELVSEKPELKALVEKKLRELHKQWDELEKTTQEKGRKLFQANRQELLLQSLADAKKKLDELESQLQSDDTGKD 1406 (2473)
T ss_pred             HHHHHHHHHHhcCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcCCCCCcC
Confidence            99999999999999989999999999999999999999999999999999899999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhhHHHHHHHHHHHHHHhcCCC
Q psy6936         969 LTSVQNLQKKHALLEADVASHLDRIESVKAATEQFLERGHFDADNIKAKQAAMCERYENLQRPI 1032 (1032)
Q Consensus       969 ~~~~~~~l~~~~~l~~ei~~~~~~v~~l~~~~~~l~~~~~~~~~~i~~~~~~l~~r~~~l~~~~ 1032 (1032)
                      +.+++.++++++.++.+|..+..+|..|..++..|...|| +++.|......+.+||..|++|+
T Consensus      1407 L~Svn~llkKqq~lEsem~~~~~kv~el~s~~~~ma~~~~-~a~~I~~~~~~v~~Rf~~L~~Pl 1469 (2473)
T KOG0517|consen 1407 LTSVNDLLKKQQVLESEMEVRAQKVAELQSQAKAMAEEGH-SAENIEETTLAVLERFEDLLGPL 1469 (2473)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhhhccCc-chhhHHHHHHHHHHHHHHHHhHH
Confidence            9999999999999999999999999999999999998888 88999999999999999999985

>KOG0517|consensus Back     alignment and domain information
>KOG0040|consensus Back     alignment and domain information
>KOG0040|consensus Back     alignment and domain information
>cd00176 SPEC Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; the repeats are independent folding units; tandem repeats are found in differing numbers and arrange in an antiparallel manner to form dimers; the repeats are defined by a characteristic tryptophan (W) residue in helix A and a leucine (L) at the carboxyl end of helix C and separated by a linker of 5 residues; two copies of the repeat are present here Back     alignment and domain information
>cd00176 SPEC Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; the repeats are independent folding units; tandem repeats are found in differing numbers and arrange in an antiparallel manner to form dimers; the repeats are defined by a characteristic tryptophan (W) residue in helix A and a leucine (L) at the carboxyl end of helix C and separated by a linker of 5 residues; two copies of the repeat are present here Back     alignment and domain information
>KOG4286|consensus Back     alignment and domain information
>KOG4286|consensus Back     alignment and domain information
>smart00150 SPEC Spectrin repeats Back     alignment and domain information
>PF00435 Spectrin: Spectrin repeat; InterPro: IPR002017 Spectrin repeats [] are found in several proteins involved in cytoskeletal structure Back     alignment and domain information
>smart00150 SPEC Spectrin repeats Back     alignment and domain information
>PF00435 Spectrin: Spectrin repeat; InterPro: IPR002017 Spectrin repeats [] are found in several proteins involved in cytoskeletal structure Back     alignment and domain information
>TIGR00606 rad50 rad50 Back     alignment and domain information
>KOG4240|consensus Back     alignment and domain information
>PRK04863 mukB cell division protein MukB; Provisional Back     alignment and domain information
>KOG4240|consensus Back     alignment and domain information
>TIGR00606 rad50 rad50 Back     alignment and domain information
>PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins Back     alignment and domain information
>KOG0161|consensus Back     alignment and domain information
>PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins Back     alignment and domain information
>KOG4674|consensus Back     alignment and domain information
>KOG0994|consensus Back     alignment and domain information
>PRK04863 mukB cell division protein MukB; Provisional Back     alignment and domain information
>PF06160 EzrA: Septation ring formation regulator, EzrA ; InterPro: IPR010379 During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerises into a ring structure that establishes the location of the nascent division site Back     alignment and domain information
>KOG0161|consensus Back     alignment and domain information
>KOG0994|consensus Back     alignment and domain information
>PF06160 EzrA: Septation ring formation regulator, EzrA ; InterPro: IPR010379 During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerises into a ring structure that establishes the location of the nascent division site Back     alignment and domain information
>PRK04778 septation ring formation regulator EzrA; Provisional Back     alignment and domain information
>PRK04778 septation ring formation regulator EzrA; Provisional Back     alignment and domain information
>PRK02224 chromosome segregation protein; Provisional Back     alignment and domain information
>PF08580 KAR9: Yeast cortical protein KAR9; InterPro: IPR013889 The KAR9 protein in Saccharomyces cerevisiae (Baker's yeast) is a cytoskeletal protein required for karyogamy, correct positioning of the mitotic spindle and for orientation of cytoplasmic microtubules [] Back     alignment and domain information
>PRK02224 chromosome segregation protein; Provisional Back     alignment and domain information
>KOG4674|consensus Back     alignment and domain information
>PF08580 KAR9: Yeast cortical protein KAR9; InterPro: IPR013889 The KAR9 protein in Saccharomyces cerevisiae (Baker's yeast) is a cytoskeletal protein required for karyogamy, correct positioning of the mitotic spindle and for orientation of cytoplasmic microtubules [] Back     alignment and domain information
>PRK03918 chromosome segregation protein; Provisional Back     alignment and domain information
>PF13514 AAA_27: AAA domain Back     alignment and domain information
>PF14643 DUF4455: Domain of unknown function (DUF4455) Back     alignment and domain information
>PF06008 Laminin_I: Laminin Domain I; InterPro: IPR009254 Laminins are glycoproteins that are major constituents of the basement membrane of cells Back     alignment and domain information
>PRK03918 chromosome segregation protein; Provisional Back     alignment and domain information
>PF06008 Laminin_I: Laminin Domain I; InterPro: IPR009254 Laminins are glycoproteins that are major constituents of the basement membrane of cells Back     alignment and domain information
>PF04912 Dynamitin: Dynamitin ; InterPro: IPR006996 Dynamitin is a subunit of the microtubule-dependent motor complex, it is also implicated in cell adhesion by binding to macrophage-enriched myristoylated alanine-rice C kinase substrate (MacMARCKS) [] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1032
3fb2_A218 Crystal Structure Of The Human Brain Alpha Spectrin 3e-56
3fb2_A218 Crystal Structure Of The Human Brain Alpha Spectrin 2e-53
3fb2_A218 Crystal Structure Of The Human Brain Alpha Spectrin 4e-17
3fb2_A218 Crystal Structure Of The Human Brain Alpha Spectrin 9e-13
3edv_A323 Crystal Structure Of Repeats 14-16 Of Beta2-Spectri 5e-48
3edv_A323 Crystal Structure Of Repeats 14-16 Of Beta2-Spectri 2e-23
3edv_A323 Crystal Structure Of Repeats 14-16 Of Beta2-Spectri 2e-16
3f31_A149 Crystal Structure Of The N-Terminal Region Of Alpha 2e-39
3f31_A149 Crystal Structure Of The N-Terminal Region Of Alpha 6e-27
3f31_A149 Crystal Structure Of The N-Terminal Region Of Alpha 3e-04
1u4q_A322 Crystal Structure Of Repeats 15, 16 And 17 Of Chick 1e-38
1u4q_A322 Crystal Structure Of Repeats 15, 16 And 17 Of Chick 5e-35
1u4q_A 322 Crystal Structure Of Repeats 15, 16 And 17 Of Chick 9e-18
3lbx_B185 Crystal Structure Of The Erythrocyte Spectrin Tetra 3e-27
3lbx_B185 Crystal Structure Of The Erythrocyte Spectrin Tetra 2e-07
1u5p_A216 Crystal Structure Of Repeats 15 And 16 Of Chicken B 1e-26
1u5p_A216 Crystal Structure Of Repeats 15 And 16 Of Chicken B 9e-20
1u5p_A 216 Crystal Structure Of Repeats 15 And 16 Of Chicken B 8e-18
3kbu_A326 Crystal Structure Of The Ankyrin Binding Domain Of 3e-23
3kbu_A326 Crystal Structure Of The Ankyrin Binding Domain Of 1e-15
3kbu_A326 Crystal Structure Of The Ankyrin Binding Domain Of 1e-11
3kbu_A326 Crystal Structure Of The Ankyrin Binding Domain Of 5e-09
1cun_A213 Crystal Structure Of Repeats 16 And 17 Of Chicken B 3e-23
3lbx_A161 Crystal Structure Of The Erythrocyte Spectrin Tetra 4e-23
3lbx_A161 Crystal Structure Of The Erythrocyte Spectrin Tetra 1e-17
3lbx_A161 Crystal Structure Of The Erythrocyte Spectrin Tetra 2e-04
1owa_A156 Solution Structural Studies On Human Erythrocyte Al 4e-23
1owa_A156 Solution Structural Studies On Human Erythrocyte Al 1e-17
1owa_A156 Solution Structural Studies On Human Erythrocyte Al 2e-04
3kbt_A326 Crystal Structure Of The Ankyrin Binding Domain Of 6e-23
3kbt_A326 Crystal Structure Of The Ankyrin Binding Domain Of 4e-15
3kbt_A326 Crystal Structure Of The Ankyrin Binding Domain Of 2e-12
3kbt_A 326 Crystal Structure Of The Ankyrin Binding Domain Of 1e-06
3f57_A225 Crystal Structure Of Human Erythroid Beta Spectrin 2e-18
3f57_A225 Crystal Structure Of Human Erythroid Beta Spectrin 9e-06
3edu_A218 Crystal Structure Of The Ankyrin-Binding Domain Of 4e-18
3edu_A218 Crystal Structure Of The Ankyrin-Binding Domain Of 2e-06
2spc_A107 Crystal Structure Of The Repetitive Segments Of Spe 8e-18
2spc_A107 Crystal Structure Of The Repetitive Segments Of Spe 5e-15
2spc_A107 Crystal Structure Of The Repetitive Segments Of Spe 9e-08
1s35_A214 Crystal Structure Of Repeats 8 And 9 Of Human Eryth 1e-15
1s35_A214 Crystal Structure Of Repeats 8 And 9 Of Human Eryth 1e-14
1aj3_A110 Solution Structure Of The Spectrin Repeat, Nmr, 20 2e-12
1aj3_A110 Solution Structure Of The Spectrin Repeat, Nmr, 20 4e-09
1aj3_A110 Solution Structure Of The Spectrin Repeat, Nmr, 20 1e-08
1sjj_A 863 Cryo-Em Structure Of Chicken Gizzard Smooth Muscle 3e-06
1g8x_A1010 Structure Of A Genetically Engineered Molecular Mot 1e-05
2ycu_A995 Crystal Structure Of Human Non Muscle Myosin 2c In 2e-05
1hci_A476 Crystal Structure Of The Rod Domain Of Alpha-Actini 5e-05
1hci_A 476 Crystal Structure Of The Rod Domain Of Alpha-Actini 5e-05
1quu_A 250 Crystal Structure Of Two Central Spectrin-Like Repe 5e-05
>pdb|3FB2|A Chain A, Crystal Structure Of The Human Brain Alpha Spectrin Repeats 15 And 16. Northeast Structural Genomics Consortium Target Hr5563a. Length = 218 Back     alignment and structure 
Iteration: 1

 Score =  217 bits (553), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 107/192 (55%), Positives = 142/192 (73%)
Query: 366 LHRFLADYRDLISWVSDMKAIISADELAKDVAGAEALLERHQEHKGEIDAREDSFRGTAD 425
           L RFL+D+RDL SW++ ++ ++S+DELAKDV GAEALLERHQEH+ EIDAR  +F+    
Sbjct: 15  LQRFLSDFRDLXSWINGIRGLVSSDELAKDVTGAEALLERHQEHRTEIDARAGTFQAFEQ 74
Query: 426 AGQSLLDRNHYAADDIREKLRNLENDKTHLLTLWEERRILYEQCMDLQLFYRDTEQADTW 485
            GQ LL   HYA+ +I++KL  L+ ++  L   W +RR   +QC++LQLF+RD EQA+ W
Sbjct: 75  FGQQLLAHGHYASPEIKQKLDILDQERADLEKAWVQRRXXLDQCLELQLFHRDCEQAENW 134
Query: 486 MAKQEAFLSNEDLGDSLDSVEALIKKHEDFEKSLAAQEEKIKALDEFATKLIEGQHYAAD 545
            A +EAFL+ ED GDSLDSVEALIKKHEDF+K++  QEEKI AL  FA +LI   HYA  
Sbjct: 135 XAAREAFLNTEDKGDSLDSVEALIKKHEDFDKAINVQEEKIAALQAFADQLIAAGHYAKG 194
Query: 546 DVAQRRDLLLKR 557
           D++ RR+ +L R
Sbjct: 195 DISSRRNEVLDR 206
>pdb|3FB2|A Chain A, Crystal Structure Of The Human Brain Alpha Spectrin Repeats 15 And 16. Northeast Structural Genomics Consortium Target Hr5563a. Length = 218 Back     alignment and structure
>pdb|3FB2|A Chain A, Crystal Structure Of The Human Brain Alpha Spectrin Repeats 15 And 16. Northeast Structural Genomics Consortium Target Hr5563a. Length = 218 Back     alignment and structure
>pdb|3FB2|A Chain A, Crystal Structure Of The Human Brain Alpha Spectrin Repeats 15 And 16. Northeast Structural Genomics Consortium Target Hr5563a. Length = 218 Back     alignment and structure
>pdb|3EDV|A Chain A, Crystal Structure Of Repeats 14-16 Of Beta2-Spectrin Length = 323 Back     alignment and structure
>pdb|3EDV|A Chain A, Crystal Structure Of Repeats 14-16 Of Beta2-Spectrin Length = 323 Back     alignment and structure
>pdb|3EDV|A Chain A, Crystal Structure Of Repeats 14-16 Of Beta2-Spectrin Length = 323 Back     alignment and structure
>pdb|3F31|A Chain A, Crystal Structure Of The N-Terminal Region Of Alphaii-Spectr Tetramerization Domain Length = 149 Back     alignment and structure
>pdb|3F31|A Chain A, Crystal Structure Of The N-Terminal Region Of Alphaii-Spectr Tetramerization Domain Length = 149 Back     alignment and structure
>pdb|3F31|A Chain A, Crystal Structure Of The N-Terminal Region Of Alphaii-Spectr Tetramerization Domain Length = 149 Back     alignment and structure
>pdb|1U4Q|A Chain A, Crystal Structure Of Repeats 15, 16 And 17 Of Chicken Brain Alpha Spectrin Length = 322 Back     alignment and structure
>pdb|1U4Q|A Chain A, Crystal Structure Of Repeats 15, 16 And 17 Of Chicken Brain Alpha Spectrin Length = 322 Back     alignment and structure
>pdb|1U4Q|A Chain A, Crystal Structure Of Repeats 15, 16 And 17 Of Chicken Brain Alpha Spectrin Length = 322 Back     alignment and structure
>pdb|3LBX|B Chain B, Crystal Structure Of The Erythrocyte Spectrin Tetramerization Domain Complex Length = 185 Back     alignment and structure
>pdb|3LBX|B Chain B, Crystal Structure Of The Erythrocyte Spectrin Tetramerization Domain Complex Length = 185 Back     alignment and structure
>pdb|1U5P|A Chain A, Crystal Structure Of Repeats 15 And 16 Of Chicken Brain Alpha Spectrin Length = 216 Back     alignment and structure
>pdb|1U5P|A Chain A, Crystal Structure Of Repeats 15 And 16 Of Chicken Brain Alpha Spectrin Length = 216 Back     alignment and structure
>pdb|1U5P|A Chain A, Crystal Structure Of Repeats 15 And 16 Of Chicken Brain Alpha Spectrin Length = 216 Back     alignment and structure
>pdb|3KBU|A Chain A, Crystal Structure Of The Ankyrin Binding Domain Of Human Erythroid Beta Spectrin (Repeats 13-15) In Complex With The Spectrin Binding Domain Of Human Erythroid Ankyrin (Zu5-Ank), Emts Derivative Length = 326 Back     alignment and structure
>pdb|3KBU|A Chain A, Crystal Structure Of The Ankyrin Binding Domain Of Human Erythroid Beta Spectrin (Repeats 13-15) In Complex With The Spectrin Binding Domain Of Human Erythroid Ankyrin (Zu5-Ank), Emts Derivative Length = 326 Back     alignment and structure
>pdb|3KBU|A Chain A, Crystal Structure Of The Ankyrin Binding Domain Of Human Erythroid Beta Spectrin (Repeats 13-15) In Complex With The Spectrin Binding Domain Of Human Erythroid Ankyrin (Zu5-Ank), Emts Derivative Length = 326 Back     alignment and structure
>pdb|3KBU|A Chain A, Crystal Structure Of The Ankyrin Binding Domain Of Human Erythroid Beta Spectrin (Repeats 13-15) In Complex With The Spectrin Binding Domain Of Human Erythroid Ankyrin (Zu5-Ank), Emts Derivative Length = 326 Back     alignment and structure
>pdb|1CUN|A Chain A, Crystal Structure Of Repeats 16 And 17 Of Chicken Brain Alpha Spectrin Length = 213 Back     alignment and structure
>pdb|3LBX|A Chain A, Crystal Structure Of The Erythrocyte Spectrin Tetramerization Domain Complex Length = 161 Back     alignment and structure
>pdb|3LBX|A Chain A, Crystal Structure Of The Erythrocyte Spectrin Tetramerization Domain Complex Length = 161 Back     alignment and structure
>pdb|3LBX|A Chain A, Crystal Structure Of The Erythrocyte Spectrin Tetramerization Domain Complex Length = 161 Back     alignment and structure
>pdb|1OWA|A Chain A, Solution Structural Studies On Human Erythrocyte Alpha Spectrin N Terminal Tetramerization Domain Length = 156 Back     alignment and structure
>pdb|1OWA|A Chain A, Solution Structural Studies On Human Erythrocyte Alpha Spectrin N Terminal Tetramerization Domain Length = 156 Back     alignment and structure
>pdb|1OWA|A Chain A, Solution Structural Studies On Human Erythrocyte Alpha Spectrin N Terminal Tetramerization Domain Length = 156 Back     alignment and structure
>pdb|3KBT|A Chain A, Crystal Structure Of The Ankyrin Binding Domain Of Human Erythroid Beta Spectrin (Repeats 13-15) In Complex With The Spectrin Binding Domain Of Human Erythroid Ankyrin (Zu5-Ank) Length = 326 Back     alignment and structure
>pdb|3KBT|A Chain A, Crystal Structure Of The Ankyrin Binding Domain Of Human Erythroid Beta Spectrin (Repeats 13-15) In Complex With The Spectrin Binding Domain Of Human Erythroid Ankyrin (Zu5-Ank) Length = 326 Back     alignment and structure
>pdb|3KBT|A Chain A, Crystal Structure Of The Ankyrin Binding Domain Of Human Erythroid Beta Spectrin (Repeats 13-15) In Complex With The Spectrin Binding Domain Of Human Erythroid Ankyrin (Zu5-Ank) Length = 326 Back     alignment and structure
>pdb|3KBT|A Chain A, Crystal Structure Of The Ankyrin Binding Domain Of Human Erythroid Beta Spectrin (Repeats 13-15) In Complex With The Spectrin Binding Domain Of Human Erythroid Ankyrin (Zu5-Ank) Length = 326 Back     alignment and structure
>pdb|3F57|A Chain A, Crystal Structure Of Human Erythroid Beta Spectrin Repeats 14 And 15 (Ankyrin Binding Domain) Length = 225 Back     alignment and structure
>pdb|3F57|A Chain A, Crystal Structure Of Human Erythroid Beta Spectrin Repeats 14 And 15 (Ankyrin Binding Domain) Length = 225 Back     alignment and structure
>pdb|3EDU|A Chain A, Crystal Structure Of The Ankyrin-Binding Domain Of Human Erythroid Spectrin Length = 218 Back     alignment and structure
>pdb|3EDU|A Chain A, Crystal Structure Of The Ankyrin-Binding Domain Of Human Erythroid Spectrin Length = 218 Back     alignment and structure
>pdb|2SPC|A Chain A, Crystal Structure Of The Repetitive Segments Of Spectrin Length = 107 Back     alignment and structure
>pdb|2SPC|A Chain A, Crystal Structure Of The Repetitive Segments Of Spectrin Length = 107 Back     alignment and structure
>pdb|2SPC|A Chain A, Crystal Structure Of The Repetitive Segments Of Spectrin Length = 107 Back     alignment and structure
>pdb|1S35|A Chain A, Crystal Structure Of Repeats 8 And 9 Of Human Erythroid Spectrin Length = 214 Back     alignment and structure
>pdb|1S35|A Chain A, Crystal Structure Of Repeats 8 And 9 Of Human Erythroid Spectrin Length = 214 Back     alignment and structure
>pdb|1AJ3|A Chain A, Solution Structure Of The Spectrin Repeat, Nmr, 20 Structures Length = 110 Back     alignment and structure
>pdb|1AJ3|A Chain A, Solution Structure Of The Spectrin Repeat, Nmr, 20 Structures Length = 110 Back     alignment and structure
>pdb|1AJ3|A Chain A, Solution Structure Of The Spectrin Repeat, Nmr, 20 Structures Length = 110 Back     alignment and structure
>pdb|1SJJ|A Chain A, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha- Actinin Length = 863 Back     alignment and structure
>pdb|1G8X|A Chain A, Structure Of A Genetically Engineered Molecular Motor Length = 1010 Back     alignment and structure
>pdb|2YCU|A Chain A, Crystal Structure Of Human Non Muscle Myosin 2c In Pre-power Stroke State Length = 995 Back     alignment and structure
>pdb|1HCI|A Chain A, Crystal Structure Of The Rod Domain Of Alpha-Actinin Length = 476 Back     alignment and structure
>pdb|1HCI|A Chain A, Crystal Structure Of The Rod Domain Of Alpha-Actinin Length = 476 Back     alignment and structure
>pdb|1QUU|A Chain A, Crystal Structure Of Two Central Spectrin-Like Repeats From Alpha-Actinin Length = 250 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1032
3edv_A323 Spectrin beta chain, brain 1; spectrin repeat, coi 6e-64
3edv_A323 Spectrin beta chain, brain 1; spectrin repeat, coi 2e-47
3edv_A323 Spectrin beta chain, brain 1; spectrin repeat, coi 6e-45
3edv_A323 Spectrin beta chain, brain 1; spectrin repeat, coi 1e-44
3edv_A323 Spectrin beta chain, brain 1; spectrin repeat, coi 1e-40
3edv_A323 Spectrin beta chain, brain 1; spectrin repeat, coi 3e-37
3edv_A323 Spectrin beta chain, brain 1; spectrin repeat, coi 1e-32
3edv_A 323 Spectrin beta chain, brain 1; spectrin repeat, coi 1e-24
3edv_A323 Spectrin beta chain, brain 1; spectrin repeat, coi 8e-14
3kbt_A326 Beta-I spectrin, spectrin beta chain, erythrocyte; 1e-63
3kbt_A326 Beta-I spectrin, spectrin beta chain, erythrocyte; 5e-53
3kbt_A326 Beta-I spectrin, spectrin beta chain, erythrocyte; 8e-51
3kbt_A326 Beta-I spectrin, spectrin beta chain, erythrocyte; 4e-43
3kbt_A326 Beta-I spectrin, spectrin beta chain, erythrocyte; 1e-41
3kbt_A326 Beta-I spectrin, spectrin beta chain, erythrocyte; 4e-30
3kbt_A 326 Beta-I spectrin, spectrin beta chain, erythrocyte; 9e-30
1u4q_A322 Spectrin alpha chain, brain; alpha spectrin, three 4e-58
1u4q_A322 Spectrin alpha chain, brain; alpha spectrin, three 3e-52
1u4q_A322 Spectrin alpha chain, brain; alpha spectrin, three 2e-50
1u4q_A322 Spectrin alpha chain, brain; alpha spectrin, three 1e-49
1u4q_A322 Spectrin alpha chain, brain; alpha spectrin, three 4e-49
1u4q_A322 Spectrin alpha chain, brain; alpha spectrin, three 4e-47
1u4q_A322 Spectrin alpha chain, brain; alpha spectrin, three 9e-45
1u4q_A322 Spectrin alpha chain, brain; alpha spectrin, three 5e-37
1u4q_A 322 Spectrin alpha chain, brain; alpha spectrin, three 4e-28
1u4q_A322 Spectrin alpha chain, brain; alpha spectrin, three 3e-16
1u4q_A 322 Spectrin alpha chain, brain; alpha spectrin, three 3e-15
3fb2_A218 Spectrin alpha chain, brain spectrin; non-erythroi 1e-49
3fb2_A218 Spectrin alpha chain, brain spectrin; non-erythroi 3e-46
3fb2_A218 Spectrin alpha chain, brain spectrin; non-erythroi 3e-35
3fb2_A218 Spectrin alpha chain, brain spectrin; non-erythroi 6e-33
3fb2_A218 Spectrin alpha chain, brain spectrin; non-erythroi 4e-32
3fb2_A218 Spectrin alpha chain, brain spectrin; non-erythroi 2e-30
3fb2_A218 Spectrin alpha chain, brain spectrin; non-erythroi 8e-30
3fb2_A218 Spectrin alpha chain, brain spectrin; non-erythroi 5e-29
3fb2_A218 Spectrin alpha chain, brain spectrin; non-erythroi 7e-15
1s35_A214 Beta-I spectrin, spectrin beta chain, erythrocyte; 9e-48
1s35_A214 Beta-I spectrin, spectrin beta chain, erythrocyte; 2e-44
1s35_A214 Beta-I spectrin, spectrin beta chain, erythrocyte; 2e-32
1s35_A214 Beta-I spectrin, spectrin beta chain, erythrocyte; 1e-31
1s35_A214 Beta-I spectrin, spectrin beta chain, erythrocyte; 1e-28
1s35_A214 Beta-I spectrin, spectrin beta chain, erythrocyte; 2e-28
1s35_A214 Beta-I spectrin, spectrin beta chain, erythrocyte; 7e-28
1s35_A214 Beta-I spectrin, spectrin beta chain, erythrocyte; 3e-25
1s35_A214 Beta-I spectrin, spectrin beta chain, erythrocyte; 2e-16
1s35_A 214 Beta-I spectrin, spectrin beta chain, erythrocyte; 3e-09
3lbx_B185 Beta-I spectrin, spectrin beta chain, erythrocyte; 3e-47
3lbx_B185 Beta-I spectrin, spectrin beta chain, erythrocyte; 7e-44
3lbx_B185 Beta-I spectrin, spectrin beta chain, erythrocyte; 2e-29
3lbx_B185 Beta-I spectrin, spectrin beta chain, erythrocyte; 4e-29
3lbx_B185 Beta-I spectrin, spectrin beta chain, erythrocyte; 3e-28
3lbx_B185 Beta-I spectrin, spectrin beta chain, erythrocyte; 1e-25
3lbx_B185 Beta-I spectrin, spectrin beta chain, erythrocyte; 1e-21
3lbx_B185 Beta-I spectrin, spectrin beta chain, erythrocyte; 4e-21
3lbx_B185 Beta-I spectrin, spectrin beta chain, erythrocyte; 3e-13
3lbx_B185 Beta-I spectrin, spectrin beta chain, erythrocyte; 8e-10
3edu_A218 Beta-I spectrin, spectrin beta chain, erythrocyte; 1e-45
3edu_A218 Beta-I spectrin, spectrin beta chain, erythrocyte; 4e-31
3edu_A218 Beta-I spectrin, spectrin beta chain, erythrocyte; 6e-30
3edu_A218 Beta-I spectrin, spectrin beta chain, erythrocyte; 1e-28
3edu_A218 Beta-I spectrin, spectrin beta chain, erythrocyte; 8e-27
3edu_A218 Beta-I spectrin, spectrin beta chain, erythrocyte; 1e-25
3edu_A218 Beta-I spectrin, spectrin beta chain, erythrocyte; 1e-25
3edu_A218 Beta-I spectrin, spectrin beta chain, erythrocyte; 3e-22
3edu_A218 Beta-I spectrin, spectrin beta chain, erythrocyte; 6e-17
1cun_A213 Protein (alpha spectrin); two repeats of spectrin, 2e-38
1cun_A213 Protein (alpha spectrin); two repeats of spectrin, 8e-36
1cun_A213 Protein (alpha spectrin); two repeats of spectrin, 4e-35
1cun_A213 Protein (alpha spectrin); two repeats of spectrin, 2e-34
1cun_A213 Protein (alpha spectrin); two repeats of spectrin, 3e-33
1cun_A213 Protein (alpha spectrin); two repeats of spectrin, 5e-31
1cun_A213 Protein (alpha spectrin); two repeats of spectrin, 8e-31
1cun_A213 Protein (alpha spectrin); two repeats of spectrin, 8e-27
1cun_A213 Protein (alpha spectrin); two repeats of spectrin, 1e-16
3r6n_A450 Desmoplakin; spectrin repeat, SH3 domain, cell adh 3e-37
3r6n_A450 Desmoplakin; spectrin repeat, SH3 domain, cell adh 4e-37
3r6n_A450 Desmoplakin; spectrin repeat, SH3 domain, cell adh 4e-31
3r6n_A 450 Desmoplakin; spectrin repeat, SH3 domain, cell adh 2e-30
3r6n_A450 Desmoplakin; spectrin repeat, SH3 domain, cell adh 1e-26
3r6n_A450 Desmoplakin; spectrin repeat, SH3 domain, cell adh 1e-24
3r6n_A450 Desmoplakin; spectrin repeat, SH3 domain, cell adh 2e-21
3r6n_A 450 Desmoplakin; spectrin repeat, SH3 domain, cell adh 2e-16
3r6n_A450 Desmoplakin; spectrin repeat, SH3 domain, cell adh 1e-05
1u5p_A216 Spectrin alpha chain, brain; alpha spectrin, two r 4e-35
1u5p_A216 Spectrin alpha chain, brain; alpha spectrin, two r 4e-33
1u5p_A216 Spectrin alpha chain, brain; alpha spectrin, two r 3e-32
1u5p_A216 Spectrin alpha chain, brain; alpha spectrin, two r 5e-32
1u5p_A216 Spectrin alpha chain, brain; alpha spectrin, two r 1e-31
1u5p_A216 Spectrin alpha chain, brain; alpha spectrin, two r 7e-31
1u5p_A216 Spectrin alpha chain, brain; alpha spectrin, two r 3e-30
1u5p_A216 Spectrin alpha chain, brain; alpha spectrin, two r 2e-28
1u5p_A216 Spectrin alpha chain, brain; alpha spectrin, two r 6e-18
1u5p_A 216 Spectrin alpha chain, brain; alpha spectrin, two r 2e-16
1sjj_A863 Actinin; 3-helix bundle, calponin homology domain, 6e-34
1sjj_A863 Actinin; 3-helix bundle, calponin homology domain, 8e-32
1sjj_A 863 Actinin; 3-helix bundle, calponin homology domain, 3e-21
3lbx_A161 Spectrin alpha chain, erythrocyte; tetramer, compl 3e-33
3lbx_A161 Spectrin alpha chain, erythrocyte; tetramer, compl 5e-29
3lbx_A161 Spectrin alpha chain, erythrocyte; tetramer, compl 3e-18
3lbx_A161 Spectrin alpha chain, erythrocyte; tetramer, compl 3e-17
3lbx_A161 Spectrin alpha chain, erythrocyte; tetramer, compl 4e-17
3lbx_A161 Spectrin alpha chain, erythrocyte; tetramer, compl 1e-16
3lbx_A161 Spectrin alpha chain, erythrocyte; tetramer, compl 1e-16
3lbx_A161 Spectrin alpha chain, erythrocyte; tetramer, compl 1e-14
3lbx_A161 Spectrin alpha chain, erythrocyte; tetramer, compl 4e-14
3pe0_A283 Plectin; cytoskeleton, plakin, spectrin repeat, SH 3e-32
3pe0_A283 Plectin; cytoskeleton, plakin, spectrin repeat, SH 1e-28
3pe0_A283 Plectin; cytoskeleton, plakin, spectrin repeat, SH 4e-28
3pe0_A283 Plectin; cytoskeleton, plakin, spectrin repeat, SH 5e-26
3pe0_A283 Plectin; cytoskeleton, plakin, spectrin repeat, SH 1e-24
3pe0_A283 Plectin; cytoskeleton, plakin, spectrin repeat, SH 2e-22
3pe0_A283 Plectin; cytoskeleton, plakin, spectrin repeat, SH 2e-22
3pe0_A283 Plectin; cytoskeleton, plakin, spectrin repeat, SH 4e-19
3pe0_A 283 Plectin; cytoskeleton, plakin, spectrin repeat, SH 1e-13
3pe0_A283 Plectin; cytoskeleton, plakin, spectrin repeat, SH 4e-08
3f31_A149 Spectrin alpha chain, brain; LONE helix followed b 5e-32
3f31_A149 Spectrin alpha chain, brain; LONE helix followed b 3e-27
3f31_A149 Spectrin alpha chain, brain; LONE helix followed b 2e-18
3f31_A149 Spectrin alpha chain, brain; LONE helix followed b 8e-18
3f31_A149 Spectrin alpha chain, brain; LONE helix followed b 1e-16
3f31_A149 Spectrin alpha chain, brain; LONE helix followed b 2e-16
3f31_A149 Spectrin alpha chain, brain; LONE helix followed b 1e-15
3f31_A149 Spectrin alpha chain, brain; LONE helix followed b 3e-15
3f31_A149 Spectrin alpha chain, brain; LONE helix followed b 4e-15
1hci_A476 Alpha-actinin 2; triple-helix coiled coil, contrac 4e-31
1hci_A476 Alpha-actinin 2; triple-helix coiled coil, contrac 2e-28
1hci_A476 Alpha-actinin 2; triple-helix coiled coil, contrac 8e-25
1hci_A476 Alpha-actinin 2; triple-helix coiled coil, contrac 1e-24
1hci_A476 Alpha-actinin 2; triple-helix coiled coil, contrac 2e-20
1hci_A 476 Alpha-actinin 2; triple-helix coiled coil, contrac 1e-19
1hci_A476 Alpha-actinin 2; triple-helix coiled coil, contrac 7e-09
2spc_A107 Spectrin; cytoskeleton; 1.80A {Drosophila melanoga 5e-29
2spc_A107 Spectrin; cytoskeleton; 1.80A {Drosophila melanoga 1e-25
2spc_A107 Spectrin; cytoskeleton; 1.80A {Drosophila melanoga 1e-19
2spc_A107 Spectrin; cytoskeleton; 1.80A {Drosophila melanoga 1e-19
2spc_A107 Spectrin; cytoskeleton; 1.80A {Drosophila melanoga 2e-16
2spc_A107 Spectrin; cytoskeleton; 1.80A {Drosophila melanoga 9e-16
2spc_A107 Spectrin; cytoskeleton; 1.80A {Drosophila melanoga 6e-15
2spc_A107 Spectrin; cytoskeleton; 1.80A {Drosophila melanoga 1e-13
2spc_A107 Spectrin; cytoskeleton; 1.80A {Drosophila melanoga 1e-13
2iak_A224 Bullous pemphigoid antigen 1, isoform 5; triple he 1e-27
2iak_A224 Bullous pemphigoid antigen 1, isoform 5; triple he 2e-27
2iak_A224 Bullous pemphigoid antigen 1, isoform 5; triple he 4e-26
2iak_A224 Bullous pemphigoid antigen 1, isoform 5; triple he 3e-25
2iak_A224 Bullous pemphigoid antigen 1, isoform 5; triple he 2e-24
2iak_A224 Bullous pemphigoid antigen 1, isoform 5; triple he 3e-22
2iak_A224 Bullous pemphigoid antigen 1, isoform 5; triple he 3e-22
2iak_A224 Bullous pemphigoid antigen 1, isoform 5; triple he 9e-22
2iak_A224 Bullous pemphigoid antigen 1, isoform 5; triple he 2e-13
2iak_A 224 Bullous pemphigoid antigen 1, isoform 5; triple he 1e-11
3pdy_A210 Plectin; cytoskeleton, plakin, intermediate filame 2e-27
3pdy_A210 Plectin; cytoskeleton, plakin, intermediate filame 5e-27
3pdy_A210 Plectin; cytoskeleton, plakin, intermediate filame 2e-26
3pdy_A210 Plectin; cytoskeleton, plakin, intermediate filame 3e-25
3pdy_A210 Plectin; cytoskeleton, plakin, intermediate filame 5e-24
3pdy_A210 Plectin; cytoskeleton, plakin, intermediate filame 2e-23
3pdy_A210 Plectin; cytoskeleton, plakin, intermediate filame 4e-22
3pdy_A210 Plectin; cytoskeleton, plakin, intermediate filame 8e-22
3pdy_A210 Plectin; cytoskeleton, plakin, intermediate filame 3e-14
3pdy_A 210 Plectin; cytoskeleton, plakin, intermediate filame 6e-10
1quu_A250 Human skeletal muscle alpha-actinin 2; triple-heli 5e-24
1quu_A250 Human skeletal muscle alpha-actinin 2; triple-heli 7e-24
1quu_A250 Human skeletal muscle alpha-actinin 2; triple-heli 4e-23
1quu_A250 Human skeletal muscle alpha-actinin 2; triple-heli 6e-23
1quu_A250 Human skeletal muscle alpha-actinin 2; triple-heli 9e-23
1quu_A250 Human skeletal muscle alpha-actinin 2; triple-heli 3e-22
1quu_A250 Human skeletal muscle alpha-actinin 2; triple-heli 4e-21
1quu_A250 Human skeletal muscle alpha-actinin 2; triple-heli 7e-19
1quu_A250 Human skeletal muscle alpha-actinin 2; triple-heli 4e-08
2odv_A235 Plectin 1, HD1; plakin domain, spectrin repeat, cy 5e-17
2odv_A235 Plectin 1, HD1; plakin domain, spectrin repeat, cy 2e-13
2odv_A235 Plectin 1, HD1; plakin domain, spectrin repeat, cy 6e-12
2odv_A235 Plectin 1, HD1; plakin domain, spectrin repeat, cy 4e-09
2odv_A235 Plectin 1, HD1; plakin domain, spectrin repeat, cy 4e-08
2odv_A235 Plectin 1, HD1; plakin domain, spectrin repeat, cy 7e-07
2odv_A235 Plectin 1, HD1; plakin domain, spectrin repeat, cy 3e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-13
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-11
>3edv_A Spectrin beta chain, brain 1; spectrin repeat, coiled coil, actin capping, actin-binding, alternative splicing, calmodulin-binding, cytoplasm; 1.95A {Homo sapiens} Length = 323 Back     alignment and structure
 Score =  218 bits (557), Expect = 6e-64
 Identities = 117/318 (36%), Positives = 174/318 (54%), Gaps = 3/318 (0%)

Query: 148 LQQALVLVQFIRQCDEVMFWINDKEAFVTADEFGADLEHVEVLQRKFDEFQKDMAS-QEY 206
                 L Q  R+ D++  WI ++E    + E G D EHV +LQ +F EF +D  +  + 
Sbjct: 2   SHMRHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQE 61

Query: 207 RVTEVNQLADKLVLEGHPERETIVRRKEELSEAWMRLKQLALMRQEKLFGAHEIQRFNRD 266
           RV  VN LAD+L+  GH +  TI   K+ L+EAW  L +L   R + L  ++E+ +F  D
Sbjct: 62  RVDTVNHLADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILAASYELHKFYHD 121

Query: 267 ADETVAWIAEKDAVLSSDEYGRDLASVQTLQRKHEGVERDLAALEDKVSTLGAEADRLCG 326
           A E    I +K   L  +E GRD  +V+TLQR H   E D+ AL  +V  L  +A RL  
Sbjct: 122 AKEIFGRIQDKHKKLP-EELGRDQNTVETLQRMHTTFEHDIQALGTQVRQLQEDAARLQA 180

Query: 327 IHSDHG-DQIQAKRAEIVEYWERLTGKAKGRKQKLDESYYLHRFLADYRDLISWVSDMKA 385
            ++    D IQ +  E++E W+ L    + R+ +L ++    RF +  RDL+ W+ D+  
Sbjct: 181 AYAGDKADDIQKRENEVLEAWKSLLDACESRRVRLVDTGDKFRFFSMVRDLMLWMEDVIR 240

Query: 386 IISADELAKDVAGAEALLERHQEHKGEIDAREDSFRGTADAGQSLLDRNHYAADDIREKL 445
            I A E  +DV+  E L+  HQ  K EIDAR DSF    + G+SLL R HYA+++I+EKL
Sbjct: 241 QIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKHYASEEIKEKL 300

Query: 446 RNLENDKTHLLTLWEERR 463
             L   +  ++  WE+R 
Sbjct: 301 LQLTEKRKEMIDKWEDRW 318
>3edv_A Spectrin beta chain, brain 1; spectrin repeat, coiled coil, actin capping, actin-binding, alternative splicing, calmodulin-binding, cytoplasm; 1.95A {Homo sapiens} Length = 323 Back     alignment and structure
>3edv_A Spectrin beta chain, brain 1; spectrin repeat, coiled coil, actin capping, actin-binding, alternative splicing, calmodulin-binding, cytoplasm; 1.95A {Homo sapiens} Length = 323 Back     alignment and structure
>3edv_A Spectrin beta chain, brain 1; spectrin repeat, coiled coil, actin capping, actin-binding, alternative splicing, calmodulin-binding, cytoplasm; 1.95A {Homo sapiens} Length = 323 Back     alignment and structure
>3edv_A Spectrin beta chain, brain 1; spectrin repeat, coiled coil, actin capping, actin-binding, alternative splicing, calmodulin-binding, cytoplasm; 1.95A {Homo sapiens} Length = 323 Back     alignment and structure
>3edv_A Spectrin beta chain, brain 1; spectrin repeat, coiled coil, actin capping, actin-binding, alternative splicing, calmodulin-binding, cytoplasm; 1.95A {Homo sapiens} Length = 323 Back     alignment and structure
>3edv_A Spectrin beta chain, brain 1; spectrin repeat, coiled coil, actin capping, actin-binding, alternative splicing, calmodulin-binding, cytoplasm; 1.95A {Homo sapiens} Length = 323 Back     alignment and structure
>3edv_A Spectrin beta chain, brain 1; spectrin repeat, coiled coil, actin capping, actin-binding, alternative splicing, calmodulin-binding, cytoplasm; 1.95A {Homo sapiens} Length = 323 Back     alignment and structure
>3edv_A Spectrin beta chain, brain 1; spectrin repeat, coiled coil, actin capping, actin-binding, alternative splicing, calmodulin-binding, cytoplasm; 1.95A {Homo sapiens} Length = 323 Back     alignment and structure
>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin, spectrin repeat, three helix bundle, ANKY binding, disease mutation, structural protein, ZU5 sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A Length = 326 Back     alignment and structure
>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin, spectrin repeat, three helix bundle, ANKY binding, disease mutation, structural protein, ZU5 sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A Length = 326 Back     alignment and structure
>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin, spectrin repeat, three helix bundle, ANKY binding, disease mutation, structural protein, ZU5 sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A Length = 326 Back     alignment and structure
>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin, spectrin repeat, three helix bundle, ANKY binding, disease mutation, structural protein, ZU5 sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A Length = 326 Back     alignment and structure
>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin, spectrin repeat, three helix bundle, ANKY binding, disease mutation, structural protein, ZU5 sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A Length = 326 Back     alignment and structure
>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin, spectrin repeat, three helix bundle, ANKY binding, disease mutation, structural protein, ZU5 sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A Length = 326 Back     alignment and structure
>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin, spectrin repeat, three helix bundle, ANKY binding, disease mutation, structural protein, ZU5 sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A Length = 326 Back     alignment and structure
>1u4q_A Spectrin alpha chain, brain; alpha spectrin, three repeats of spectrin, alpha-helical linker region, 3-helix coiled-coil, structural protein; 2.50A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 Length = 322 Back     alignment and structure
>1u4q_A Spectrin alpha chain, brain; alpha spectrin, three repeats of spectrin, alpha-helical linker region, 3-helix coiled-coil, structural protein; 2.50A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 Length = 322 Back     alignment and structure
>1u4q_A Spectrin alpha chain, brain; alpha spectrin, three repeats of spectrin, alpha-helical linker region, 3-helix coiled-coil, structural protein; 2.50A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 Length = 322 Back     alignment and structure
>1u4q_A Spectrin alpha chain, brain; alpha spectrin, three repeats of spectrin, alpha-helical linker region, 3-helix coiled-coil, structural protein; 2.50A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 Length = 322 Back     alignment and structure
>1u4q_A Spectrin alpha chain, brain; alpha spectrin, three repeats of spectrin, alpha-helical linker region, 3-helix coiled-coil, structural protein; 2.50A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 Length = 322 Back     alignment and structure
>1u4q_A Spectrin alpha chain, brain; alpha spectrin, three repeats of spectrin, alpha-helical linker region, 3-helix coiled-coil, structural protein; 2.50A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 Length = 322 Back     alignment and structure
>1u4q_A Spectrin alpha chain, brain; alpha spectrin, three repeats of spectrin, alpha-helical linker region, 3-helix coiled-coil, structural protein; 2.50A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 Length = 322 Back     alignment and structure
>1u4q_A Spectrin alpha chain, brain; alpha spectrin, three repeats of spectrin, alpha-helical linker region, 3-helix coiled-coil, structural protein; 2.50A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 Length = 322 Back     alignment and structure
>1u4q_A Spectrin alpha chain, brain; alpha spectrin, three repeats of spectrin, alpha-helical linker region, 3-helix coiled-coil, structural protein; 2.50A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 Length = 322 Back     alignment and structure
>1u4q_A Spectrin alpha chain, brain; alpha spectrin, three repeats of spectrin, alpha-helical linker region, 3-helix coiled-coil, structural protein; 2.50A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 Length = 322 Back     alignment and structure
>1u4q_A Spectrin alpha chain, brain; alpha spectrin, three repeats of spectrin, alpha-helical linker region, 3-helix coiled-coil, structural protein; 2.50A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 Length = 322 Back     alignment and structure
>3fb2_A Spectrin alpha chain, brain spectrin; non-erythroid alpha chain alpha-II spectrin, fordrin alpha chain, sptan1, SPTA2_human, NESG, HR5563A; 2.30A {Homo sapiens} Length = 218 Back     alignment and structure
>3fb2_A Spectrin alpha chain, brain spectrin; non-erythroid alpha chain alpha-II spectrin, fordrin alpha chain, sptan1, SPTA2_human, NESG, HR5563A; 2.30A {Homo sapiens} Length = 218 Back     alignment and structure
>3fb2_A Spectrin alpha chain, brain spectrin; non-erythroid alpha chain alpha-II spectrin, fordrin alpha chain, sptan1, SPTA2_human, NESG, HR5563A; 2.30A {Homo sapiens} Length = 218 Back     alignment and structure
>3fb2_A Spectrin alpha chain, brain spectrin; non-erythroid alpha chain alpha-II spectrin, fordrin alpha chain, sptan1, SPTA2_human, NESG, HR5563A; 2.30A {Homo sapiens} Length = 218 Back     alignment and structure
>3fb2_A Spectrin alpha chain, brain spectrin; non-erythroid alpha chain alpha-II spectrin, fordrin alpha chain, sptan1, SPTA2_human, NESG, HR5563A; 2.30A {Homo sapiens} Length = 218 Back     alignment and structure
>3fb2_A Spectrin alpha chain, brain spectrin; non-erythroid alpha chain alpha-II spectrin, fordrin alpha chain, sptan1, SPTA2_human, NESG, HR5563A; 2.30A {Homo sapiens} Length = 218 Back     alignment and structure
>3fb2_A Spectrin alpha chain, brain spectrin; non-erythroid alpha chain alpha-II spectrin, fordrin alpha chain, sptan1, SPTA2_human, NESG, HR5563A; 2.30A {Homo sapiens} Length = 218 Back     alignment and structure
>3fb2_A Spectrin alpha chain, brain spectrin; non-erythroid alpha chain alpha-II spectrin, fordrin alpha chain, sptan1, SPTA2_human, NESG, HR5563A; 2.30A {Homo sapiens} Length = 218 Back     alignment and structure
>3fb2_A Spectrin alpha chain, brain spectrin; non-erythroid alpha chain alpha-II spectrin, fordrin alpha chain, sptan1, SPTA2_human, NESG, HR5563A; 2.30A {Homo sapiens} Length = 218 Back     alignment and structure
>1s35_A Beta-I spectrin, spectrin beta chain, erythrocyte; two repeats of spectrin, alpha helical linker region, 3- helix coiled-coils, beta spectrin; 2.40A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 Length = 214 Back     alignment and structure
>1s35_A Beta-I spectrin, spectrin beta chain, erythrocyte; two repeats of spectrin, alpha helical linker region, 3- helix coiled-coils, beta spectrin; 2.40A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 Length = 214 Back     alignment and structure
>1s35_A Beta-I spectrin, spectrin beta chain, erythrocyte; two repeats of spectrin, alpha helical linker region, 3- helix coiled-coils, beta spectrin; 2.40A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 Length = 214 Back     alignment and structure
>1s35_A Beta-I spectrin, spectrin beta chain, erythrocyte; two repeats of spectrin, alpha helical linker region, 3- helix coiled-coils, beta spectrin; 2.40A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 Length = 214 Back     alignment and structure
>1s35_A Beta-I spectrin, spectrin beta chain, erythrocyte; two repeats of spectrin, alpha helical linker region, 3- helix coiled-coils, beta spectrin; 2.40A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 Length = 214 Back     alignment and structure
>1s35_A Beta-I spectrin, spectrin beta chain, erythrocyte; two repeats of spectrin, alpha helical linker region, 3- helix coiled-coils, beta spectrin; 2.40A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 Length = 214 Back     alignment and structure
>1s35_A Beta-I spectrin, spectrin beta chain, erythrocyte; two repeats of spectrin, alpha helical linker region, 3- helix coiled-coils, beta spectrin; 2.40A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 Length = 214 Back     alignment and structure
>1s35_A Beta-I spectrin, spectrin beta chain, erythrocyte; two repeats of spectrin, alpha helical linker region, 3- helix coiled-coils, beta spectrin; 2.40A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 Length = 214 Back     alignment and structure
>1s35_A Beta-I spectrin, spectrin beta chain, erythrocyte; two repeats of spectrin, alpha helical linker region, 3- helix coiled-coils, beta spectrin; 2.40A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 Length = 214 Back     alignment and structure
>1s35_A Beta-I spectrin, spectrin beta chain, erythrocyte; two repeats of spectrin, alpha helical linker region, 3- helix coiled-coils, beta spectrin; 2.40A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 Length = 214 Back     alignment and structure
>3lbx_B Beta-I spectrin, spectrin beta chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens} Length = 185 Back     alignment and structure
>3lbx_B Beta-I spectrin, spectrin beta chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens} Length = 185 Back     alignment and structure
>3lbx_B Beta-I spectrin, spectrin beta chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens} Length = 185 Back     alignment and structure
>3lbx_B Beta-I spectrin, spectrin beta chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens} Length = 185 Back     alignment and structure
>3lbx_B Beta-I spectrin, spectrin beta chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens} Length = 185 Back     alignment and structure
>3lbx_B Beta-I spectrin, spectrin beta chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens} Length = 185 Back     alignment and structure
>3lbx_B Beta-I spectrin, spectrin beta chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens} Length = 185 Back     alignment and structure
>3lbx_B Beta-I spectrin, spectrin beta chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens} Length = 185 Back     alignment and structure
>3lbx_B Beta-I spectrin, spectrin beta chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens} Length = 185 Back     alignment and structure
>3lbx_B Beta-I spectrin, spectrin beta chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens} Length = 185 Back     alignment and structure
>3edu_A Beta-I spectrin, spectrin beta chain, erythrocyte; ankyrin, ankyrin-binding domain, actin capping, AC binding, cytoskeleton, disease mutation; 2.10A {Homo sapiens} PDB: 3f57_A Length = 218 Back     alignment and structure
>3edu_A Beta-I spectrin, spectrin beta chain, erythrocyte; ankyrin, ankyrin-binding domain, actin capping, AC binding, cytoskeleton, disease mutation; 2.10A {Homo sapiens} PDB: 3f57_A Length = 218 Back     alignment and structure
>3edu_A Beta-I spectrin, spectrin beta chain, erythrocyte; ankyrin, ankyrin-binding domain, actin capping, AC binding, cytoskeleton, disease mutation; 2.10A {Homo sapiens} PDB: 3f57_A Length = 218 Back     alignment and structure
>3edu_A Beta-I spectrin, spectrin beta chain, erythrocyte; ankyrin, ankyrin-binding domain, actin capping, AC binding, cytoskeleton, disease mutation; 2.10A {Homo sapiens} PDB: 3f57_A Length = 218 Back     alignment and structure
>3edu_A Beta-I spectrin, spectrin beta chain, erythrocyte; ankyrin, ankyrin-binding domain, actin capping, AC binding, cytoskeleton, disease mutation; 2.10A {Homo sapiens} PDB: 3f57_A Length = 218 Back     alignment and structure
>3edu_A Beta-I spectrin, spectrin beta chain, erythrocyte; ankyrin, ankyrin-binding domain, actin capping, AC binding, cytoskeleton, disease mutation; 2.10A {Homo sapiens} PDB: 3f57_A Length = 218 Back     alignment and structure
>3edu_A Beta-I spectrin, spectrin beta chain, erythrocyte; ankyrin, ankyrin-binding domain, actin capping, AC binding, cytoskeleton, disease mutation; 2.10A {Homo sapiens} PDB: 3f57_A Length = 218 Back     alignment and structure
>3edu_A Beta-I spectrin, spectrin beta chain, erythrocyte; ankyrin, ankyrin-binding domain, actin capping, AC binding, cytoskeleton, disease mutation; 2.10A {Homo sapiens} PDB: 3f57_A Length = 218 Back     alignment and structure
>3edu_A Beta-I spectrin, spectrin beta chain, erythrocyte; ankyrin, ankyrin-binding domain, actin capping, AC binding, cytoskeleton, disease mutation; 2.10A {Homo sapiens} PDB: 3f57_A Length = 218 Back     alignment and structure
>1cun_A Protein (alpha spectrin); two repeats of spectrin, alpha helical linker region, 2 tandem 3-helix coiled- coils, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 PDB: 1aj3_A Length = 213 Back     alignment and structure
>1cun_A Protein (alpha spectrin); two repeats of spectrin, alpha helical linker region, 2 tandem 3-helix coiled- coils, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 PDB: 1aj3_A Length = 213 Back     alignment and structure
>1cun_A Protein (alpha spectrin); two repeats of spectrin, alpha helical linker region, 2 tandem 3-helix coiled- coils, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 PDB: 1aj3_A Length = 213 Back     alignment and structure
>1cun_A Protein (alpha spectrin); two repeats of spectrin, alpha helical linker region, 2 tandem 3-helix coiled- coils, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 PDB: 1aj3_A Length = 213 Back     alignment and structure
>1cun_A Protein (alpha spectrin); two repeats of spectrin, alpha helical linker region, 2 tandem 3-helix coiled- coils, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 PDB: 1aj3_A Length = 213 Back     alignment and structure
>1cun_A Protein (alpha spectrin); two repeats of spectrin, alpha helical linker region, 2 tandem 3-helix coiled- coils, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 PDB: 1aj3_A Length = 213 Back     alignment and structure
>1cun_A Protein (alpha spectrin); two repeats of spectrin, alpha helical linker region, 2 tandem 3-helix coiled- coils, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 PDB: 1aj3_A Length = 213 Back     alignment and structure
>1cun_A Protein (alpha spectrin); two repeats of spectrin, alpha helical linker region, 2 tandem 3-helix coiled- coils, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 PDB: 1aj3_A Length = 213 Back     alignment and structure
>1cun_A Protein (alpha spectrin); two repeats of spectrin, alpha helical linker region, 2 tandem 3-helix coiled- coils, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 PDB: 1aj3_A Length = 213 Back     alignment and structure
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens} Length = 450 Back     alignment and structure
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens} Length = 450 Back     alignment and structure
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens} Length = 450 Back     alignment and structure
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens} Length = 450 Back     alignment and structure
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens} Length = 450 Back     alignment and structure
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens} Length = 450 Back     alignment and structure
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens} Length = 450 Back     alignment and structure
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens} Length = 450 Back     alignment and structure
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens} Length = 450 Back     alignment and structure
>1u5p_A Spectrin alpha chain, brain; alpha spectrin, two repeats of spectrin, alpha-helical linker region, 3-helix coiled coil, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 Length = 216 Back     alignment and structure
>1u5p_A Spectrin alpha chain, brain; alpha spectrin, two repeats of spectrin, alpha-helical linker region, 3-helix coiled coil, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 Length = 216 Back     alignment and structure
>1u5p_A Spectrin alpha chain, brain; alpha spectrin, two repeats of spectrin, alpha-helical linker region, 3-helix coiled coil, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 Length = 216 Back     alignment and structure
>1u5p_A Spectrin alpha chain, brain; alpha spectrin, two repeats of spectrin, alpha-helical linker region, 3-helix coiled coil, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 Length = 216 Back     alignment and structure
>1u5p_A Spectrin alpha chain, brain; alpha spectrin, two repeats of spectrin, alpha-helical linker region, 3-helix coiled coil, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 Length = 216 Back     alignment and structure
>1u5p_A Spectrin alpha chain, brain; alpha spectrin, two repeats of spectrin, alpha-helical linker region, 3-helix coiled coil, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 Length = 216 Back     alignment and structure
>1u5p_A Spectrin alpha chain, brain; alpha spectrin, two repeats of spectrin, alpha-helical linker region, 3-helix coiled coil, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 Length = 216 Back     alignment and structure
>1u5p_A Spectrin alpha chain, brain; alpha spectrin, two repeats of spectrin, alpha-helical linker region, 3-helix coiled coil, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 Length = 216 Back     alignment and structure
>1u5p_A Spectrin alpha chain, brain; alpha spectrin, two repeats of spectrin, alpha-helical linker region, 3-helix coiled coil, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 Length = 216 Back     alignment and structure
>1u5p_A Spectrin alpha chain, brain; alpha spectrin, two repeats of spectrin, alpha-helical linker region, 3-helix coiled coil, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 Length = 216 Back     alignment and structure
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1 Length = 863 Back     alignment and structure
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1 Length = 863 Back     alignment and structure
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1 Length = 863 Back     alignment and structure
>3lbx_A Spectrin alpha chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens} PDB: 1owa_A Length = 161 Back     alignment and structure
>3lbx_A Spectrin alpha chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens} PDB: 1owa_A Length = 161 Back     alignment and structure
>3lbx_A Spectrin alpha chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens} PDB: 1owa_A Length = 161 Back     alignment and structure
>3lbx_A Spectrin alpha chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens} PDB: 1owa_A Length = 161 Back     alignment and structure
>3lbx_A Spectrin alpha chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens} PDB: 1owa_A Length = 161 Back     alignment and structure
>3lbx_A Spectrin alpha chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens} PDB: 1owa_A Length = 161 Back     alignment and structure
>3lbx_A Spectrin alpha chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens} PDB: 1owa_A Length = 161 Back     alignment and structure
>3lbx_A Spectrin alpha chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens} PDB: 1owa_A Length = 161 Back     alignment and structure
>3lbx_A Spectrin alpha chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens} PDB: 1owa_A Length = 161 Back     alignment and structure
>3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural prote intermediate filament, crosslinking; 2.95A {Homo sapiens} Length = 283 Back     alignment and structure
>3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural prote intermediate filament, crosslinking; 2.95A {Homo sapiens} Length = 283 Back     alignment and structure
>3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural prote intermediate filament, crosslinking; 2.95A {Homo sapiens} Length = 283 Back     alignment and structure
>3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural prote intermediate filament, crosslinking; 2.95A {Homo sapiens} Length = 283 Back     alignment and structure
>3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural prote intermediate filament, crosslinking; 2.95A {Homo sapiens} Length = 283 Back     alignment and structure
>3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural prote intermediate filament, crosslinking; 2.95A {Homo sapiens} Length = 283 Back     alignment and structure
>3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural prote intermediate filament, crosslinking; 2.95A {Homo sapiens} Length = 283 Back     alignment and structure
>3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural prote intermediate filament, crosslinking; 2.95A {Homo sapiens} Length = 283 Back     alignment and structure
>3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural prote intermediate filament, crosslinking; 2.95A {Homo sapiens} Length = 283 Back     alignment and structure
>3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural prote intermediate filament, crosslinking; 2.95A {Homo sapiens} Length = 283 Back     alignment and structure
>3f31_A Spectrin alpha chain, brain; LONE helix followed by A triple helical bundle, actin cappin binding, alternative splicing, calcium; 2.30A {Homo sapiens} Length = 149 Back     alignment and structure
>3f31_A Spectrin alpha chain, brain; LONE helix followed by A triple helical bundle, actin cappin binding, alternative splicing, calcium; 2.30A {Homo sapiens} Length = 149 Back     alignment and structure
>3f31_A Spectrin alpha chain, brain; LONE helix followed by A triple helical bundle, actin cappin binding, alternative splicing, calcium; 2.30A {Homo sapiens} Length = 149 Back     alignment and structure
>3f31_A Spectrin alpha chain, brain; LONE helix followed by A triple helical bundle, actin cappin binding, alternative splicing, calcium; 2.30A {Homo sapiens} Length = 149 Back     alignment and structure
>3f31_A Spectrin alpha chain, brain; LONE helix followed by A triple helical bundle, actin cappin binding, alternative splicing, calcium; 2.30A {Homo sapiens} Length = 149 Back     alignment and structure
>3f31_A Spectrin alpha chain, brain; LONE helix followed by A triple helical bundle, actin cappin binding, alternative splicing, calcium; 2.30A {Homo sapiens} Length = 149 Back     alignment and structure
>3f31_A Spectrin alpha chain, brain; LONE helix followed by A triple helical bundle, actin cappin binding, alternative splicing, calcium; 2.30A {Homo sapiens} Length = 149 Back     alignment and structure
>3f31_A Spectrin alpha chain, brain; LONE helix followed by A triple helical bundle, actin cappin binding, alternative splicing, calcium; 2.30A {Homo sapiens} Length = 149 Back     alignment and structure
>3f31_A Spectrin alpha chain, brain; LONE helix followed by A triple helical bundle, actin cappin binding, alternative splicing, calcium; 2.30A {Homo sapiens} Length = 149 Back     alignment and structure
>1hci_A Alpha-actinin 2; triple-helix coiled coil, contractIle protein, muscle, Z- LINE, actin-binding protein; 2.8A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 a.7.1.1 Length = 476 Back     alignment and structure
>1hci_A Alpha-actinin 2; triple-helix coiled coil, contractIle protein, muscle, Z- LINE, actin-binding protein; 2.8A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 a.7.1.1 Length = 476 Back     alignment and structure
>1hci_A Alpha-actinin 2; triple-helix coiled coil, contractIle protein, muscle, Z- LINE, actin-binding protein; 2.8A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 a.7.1.1 Length = 476 Back     alignment and structure
>1hci_A Alpha-actinin 2; triple-helix coiled coil, contractIle protein, muscle, Z- LINE, actin-binding protein; 2.8A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 a.7.1.1 Length = 476 Back     alignment and structure
>1hci_A Alpha-actinin 2; triple-helix coiled coil, contractIle protein, muscle, Z- LINE, actin-binding protein; 2.8A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 a.7.1.1 Length = 476 Back     alignment and structure
>1hci_A Alpha-actinin 2; triple-helix coiled coil, contractIle protein, muscle, Z- LINE, actin-binding protein; 2.8A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 a.7.1.1 Length = 476 Back     alignment and structure
>1hci_A Alpha-actinin 2; triple-helix coiled coil, contractIle protein, muscle, Z- LINE, actin-binding protein; 2.8A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 a.7.1.1 Length = 476 Back     alignment and structure
>2spc_A Spectrin; cytoskeleton; 1.80A {Drosophila melanogaster} SCOP: a.7.1.1 Length = 107 Back     alignment and structure
>2spc_A Spectrin; cytoskeleton; 1.80A {Drosophila melanogaster} SCOP: a.7.1.1 Length = 107 Back     alignment and structure
>2spc_A Spectrin; cytoskeleton; 1.80A {Drosophila melanogaster} SCOP: a.7.1.1 Length = 107 Back     alignment and structure
>2spc_A Spectrin; cytoskeleton; 1.80A {Drosophila melanogaster} SCOP: a.7.1.1 Length = 107 Back     alignment and structure
>2spc_A Spectrin; cytoskeleton; 1.80A {Drosophila melanogaster} SCOP: a.7.1.1 Length = 107 Back     alignment and structure
>2spc_A Spectrin; cytoskeleton; 1.80A {Drosophila melanogaster} SCOP: a.7.1.1 Length = 107 Back     alignment and structure
>2spc_A Spectrin; cytoskeleton; 1.80A {Drosophila melanogaster} SCOP: a.7.1.1 Length = 107 Back     alignment and structure
>2spc_A Spectrin; cytoskeleton; 1.80A {Drosophila melanogaster} SCOP: a.7.1.1 Length = 107 Back     alignment and structure
>2spc_A Spectrin; cytoskeleton; 1.80A {Drosophila melanogaster} SCOP: a.7.1.1 Length = 107 Back     alignment and structure
>2iak_A Bullous pemphigoid antigen 1, isoform 5; triple helical bundle, spectrin repeat, cell adhesion; 3.00A {Mus musculus} Length = 224 Back     alignment and structure
>2iak_A Bullous pemphigoid antigen 1, isoform 5; triple helical bundle, spectrin repeat, cell adhesion; 3.00A {Mus musculus} Length = 224 Back     alignment and structure
>2iak_A Bullous pemphigoid antigen 1, isoform 5; triple helical bundle, spectrin repeat, cell adhesion; 3.00A {Mus musculus} Length = 224 Back     alignment and structure
>2iak_A Bullous pemphigoid antigen 1, isoform 5; triple helical bundle, spectrin repeat, cell adhesion; 3.00A {Mus musculus} Length = 224 Back     alignment and structure
>2iak_A Bullous pemphigoid antigen 1, isoform 5; triple helical bundle, spectrin repeat, cell adhesion; 3.00A {Mus musculus} Length = 224 Back     alignment and structure
>2iak_A Bullous pemphigoid antigen 1, isoform 5; triple helical bundle, spectrin repeat, cell adhesion; 3.00A {Mus musculus} Length = 224 Back     alignment and structure
>2iak_A Bullous pemphigoid antigen 1, isoform 5; triple helical bundle, spectrin repeat, cell adhesion; 3.00A {Mus musculus} Length = 224 Back     alignment and structure
>2iak_A Bullous pemphigoid antigen 1, isoform 5; triple helical bundle, spectrin repeat, cell adhesion; 3.00A {Mus musculus} Length = 224 Back     alignment and structure
>2iak_A Bullous pemphigoid antigen 1, isoform 5; triple helical bundle, spectrin repeat, cell adhesion; 3.00A {Mus musculus} Length = 224 Back     alignment and structure
>2iak_A Bullous pemphigoid antigen 1, isoform 5; triple helical bundle, spectrin repeat, cell adhesion; 3.00A {Mus musculus} Length = 224 Back     alignment and structure
>3pdy_A Plectin; cytoskeleton, plakin, intermediate filament, spectrin repeat structural protein, crosslinking; 2.22A {Homo sapiens} Length = 210 Back     alignment and structure
>3pdy_A Plectin; cytoskeleton, plakin, intermediate filament, spectrin repeat structural protein, crosslinking; 2.22A {Homo sapiens} Length = 210 Back     alignment and structure
>3pdy_A Plectin; cytoskeleton, plakin, intermediate filament, spectrin repeat structural protein, crosslinking; 2.22A {Homo sapiens} Length = 210 Back     alignment and structure
>3pdy_A Plectin; cytoskeleton, plakin, intermediate filament, spectrin repeat structural protein, crosslinking; 2.22A {Homo sapiens} Length = 210 Back     alignment and structure
>3pdy_A Plectin; cytoskeleton, plakin, intermediate filament, spectrin repeat structural protein, crosslinking; 2.22A {Homo sapiens} Length = 210 Back     alignment and structure
>3pdy_A Plectin; cytoskeleton, plakin, intermediate filament, spectrin repeat structural protein, crosslinking; 2.22A {Homo sapiens} Length = 210 Back     alignment and structure
>3pdy_A Plectin; cytoskeleton, plakin, intermediate filament, spectrin repeat structural protein, crosslinking; 2.22A {Homo sapiens} Length = 210 Back     alignment and structure
>3pdy_A Plectin; cytoskeleton, plakin, intermediate filament, spectrin repeat structural protein, crosslinking; 2.22A {Homo sapiens} Length = 210 Back     alignment and structure
>3pdy_A Plectin; cytoskeleton, plakin, intermediate filament, spectrin repeat structural protein, crosslinking; 2.22A {Homo sapiens} Length = 210 Back     alignment and structure
>3pdy_A Plectin; cytoskeleton, plakin, intermediate filament, spectrin repeat structural protein, crosslinking; 2.22A {Homo sapiens} Length = 210 Back     alignment and structure
>1quu_A Human skeletal muscle alpha-actinin 2; triple-helix coiled coil, contractIle protein; 2.50A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 Length = 250 Back     alignment and structure
>1quu_A Human skeletal muscle alpha-actinin 2; triple-helix coiled coil, contractIle protein; 2.50A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 Length = 250 Back     alignment and structure
>1quu_A Human skeletal muscle alpha-actinin 2; triple-helix coiled coil, contractIle protein; 2.50A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 Length = 250 Back     alignment and structure
>1quu_A Human skeletal muscle alpha-actinin 2; triple-helix coiled coil, contractIle protein; 2.50A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 Length = 250 Back     alignment and structure
>1quu_A Human skeletal muscle alpha-actinin 2; triple-helix coiled coil, contractIle protein; 2.50A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 Length = 250 Back     alignment and structure
>1quu_A Human skeletal muscle alpha-actinin 2; triple-helix coiled coil, contractIle protein; 2.50A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 Length = 250 Back     alignment and structure
>1quu_A Human skeletal muscle alpha-actinin 2; triple-helix coiled coil, contractIle protein; 2.50A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 Length = 250 Back     alignment and structure
>1quu_A Human skeletal muscle alpha-actinin 2; triple-helix coiled coil, contractIle protein; 2.50A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 Length = 250 Back     alignment and structure
>1quu_A Human skeletal muscle alpha-actinin 2; triple-helix coiled coil, contractIle protein; 2.50A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 Length = 250 Back     alignment and structure
>2odv_A Plectin 1, HD1; plakin domain, spectrin repeat, cytoskeleton, hemidesmosomes epidermolysis bullosa, structural protein; 2.05A {Homo sapiens} PDB: 2odu_A Length = 235 Back     alignment and structure
>2odv_A Plectin 1, HD1; plakin domain, spectrin repeat, cytoskeleton, hemidesmosomes epidermolysis bullosa, structural protein; 2.05A {Homo sapiens} PDB: 2odu_A Length = 235 Back     alignment and structure
>2odv_A Plectin 1, HD1; plakin domain, spectrin repeat, cytoskeleton, hemidesmosomes epidermolysis bullosa, structural protein; 2.05A {Homo sapiens} PDB: 2odu_A Length = 235 Back     alignment and structure
>2odv_A Plectin 1, HD1; plakin domain, spectrin repeat, cytoskeleton, hemidesmosomes epidermolysis bullosa, structural protein; 2.05A {Homo sapiens} PDB: 2odu_A Length = 235 Back     alignment and structure
>2odv_A Plectin 1, HD1; plakin domain, spectrin repeat, cytoskeleton, hemidesmosomes epidermolysis bullosa, structural protein; 2.05A {Homo sapiens} PDB: 2odu_A Length = 235 Back     alignment and structure
>2odv_A Plectin 1, HD1; plakin domain, spectrin repeat, cytoskeleton, hemidesmosomes epidermolysis bullosa, structural protein; 2.05A {Homo sapiens} PDB: 2odu_A Length = 235 Back     alignment and structure
>2odv_A Plectin 1, HD1; plakin domain, spectrin repeat, cytoskeleton, hemidesmosomes epidermolysis bullosa, structural protein; 2.05A {Homo sapiens} PDB: 2odu_A Length = 235 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query1032
3edv_A323 Spectrin beta chain, brain 1; spectrin repeat, coi 100.0
1u4q_A322 Spectrin alpha chain, brain; alpha spectrin, three 100.0
1u4q_A322 Spectrin alpha chain, brain; alpha spectrin, three 100.0
3kbt_A326 Beta-I spectrin, spectrin beta chain, erythrocyte; 100.0
1hci_A476 Alpha-actinin 2; triple-helix coiled coil, contrac 100.0
3edv_A323 Spectrin beta chain, brain 1; spectrin repeat, coi 100.0
3kbt_A326 Beta-I spectrin, spectrin beta chain, erythrocyte; 100.0
1hci_A476 Alpha-actinin 2; triple-helix coiled coil, contrac 100.0
3r6n_A450 Desmoplakin; spectrin repeat, SH3 domain, cell adh 99.97
3r6n_A450 Desmoplakin; spectrin repeat, SH3 domain, cell adh 99.96
1sjj_A863 Actinin; 3-helix bundle, calponin homology domain, 99.95
1sjj_A863 Actinin; 3-helix bundle, calponin homology domain, 99.95
1u5p_A216 Spectrin alpha chain, brain; alpha spectrin, two r 99.92
1cun_A213 Protein (alpha spectrin); two repeats of spectrin, 99.92
1cun_A213 Protein (alpha spectrin); two repeats of spectrin, 99.91
3edu_A218 Beta-I spectrin, spectrin beta chain, erythrocyte; 99.91
1u5p_A216 Spectrin alpha chain, brain; alpha spectrin, two r 99.91
1s35_A214 Beta-I spectrin, spectrin beta chain, erythrocyte; 99.91
1s35_A214 Beta-I spectrin, spectrin beta chain, erythrocyte; 99.91
3fb2_A218 Spectrin alpha chain, brain spectrin; non-erythroi 99.9
3fb2_A218 Spectrin alpha chain, brain spectrin; non-erythroi 99.9
3edu_A218 Beta-I spectrin, spectrin beta chain, erythrocyte; 99.88
1quu_A250 Human skeletal muscle alpha-actinin 2; triple-heli 99.86
1quu_A250 Human skeletal muscle alpha-actinin 2; triple-heli 99.86
2iak_A224 Bullous pemphigoid antigen 1, isoform 5; triple he 99.84
3pdy_A210 Plectin; cytoskeleton, plakin, intermediate filame 99.84
2iak_A224 Bullous pemphigoid antigen 1, isoform 5; triple he 99.83
3pdy_A210 Plectin; cytoskeleton, plakin, intermediate filame 99.83
3lbx_B185 Beta-I spectrin, spectrin beta chain, erythrocyte; 99.79
3lbx_B185 Beta-I spectrin, spectrin beta chain, erythrocyte; 99.79
3pe0_A283 Plectin; cytoskeleton, plakin, spectrin repeat, SH 99.75
3lbx_A161 Spectrin alpha chain, erythrocyte; tetramer, compl 99.75
3f31_A149 Spectrin alpha chain, brain; LONE helix followed b 99.74
3pe0_A283 Plectin; cytoskeleton, plakin, spectrin repeat, SH 99.73
3lbx_A161 Spectrin alpha chain, erythrocyte; tetramer, compl 99.73
3f31_A149 Spectrin alpha chain, brain; LONE helix followed b 99.71
3uun_A119 Dystrophin; triple helical, cell structure and sta 99.33
3uul_A118 Utrophin; spectrin repeat, structural protein, cyt 99.32
1g8x_A1010 Myosin II heavy chain fused to alpha-actinin 3; mo 99.31
3uul_A118 Utrophin; spectrin repeat, structural protein, cyt 99.3
3uun_A119 Dystrophin; triple helical, cell structure and sta 99.3
1g8x_A1010 Myosin II heavy chain fused to alpha-actinin 3; mo 99.25
2odv_A235 Plectin 1, HD1; plakin domain, spectrin repeat, cy 99.19
2spc_A107 Spectrin; cytoskeleton; 1.80A {Drosophila melanoga 99.18
2spc_A107 Spectrin; cytoskeleton; 1.80A {Drosophila melanoga 99.16
2odv_A235 Plectin 1, HD1; plakin domain, spectrin repeat, cy 99.07
2ycu_A995 Non muscle myosin 2C, alpha-actinin; motor protein 98.78
2ycu_A995 Non muscle myosin 2C, alpha-actinin; motor protein 98.65
1wlx_A129 Alpha-actinin 4; three-helix bundle, protein bindi 98.09
1wlx_A129 Alpha-actinin 4; three-helix bundle, protein bindi 98.08
>3edv_A Spectrin beta chain, brain 1; spectrin repeat, coiled coil, actin capping, actin-binding, alternative splicing, calmodulin-binding, cytoplasm; 1.95A {Homo sapiens} Back     alignment and structure
Probab=100.00  E-value=1.3e-33  Score=308.04  Aligned_cols=316  Identities=37%  Similarity=0.606  Sum_probs=303.1

Q ss_pred             HHHHHHHHHHhHHHHHhHHhhhhhhcccccCCCHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHcCCCCchHH
Q psy6936         151 ALVLVQFIRQCDEVMFWINDKEAFVTADEFGADLEHVEVLQRKFDEFQKDMAS-QEYRVTEVNQLADKLVLEGHPERETI  229 (1032)
Q Consensus       151 ~l~~~~f~~~~~~~~~wl~~~e~~l~~~~~~~d~~~~~~~l~~~~~l~~~l~~-~~~~l~~l~~~~~~l~~~~~~~~~~i  229 (1032)
                      .+.+++|...++.+..||.+++..+.+.++|.|++.++.++.+|+.|..++.+ +.+.|..++..|..|+..++|+.+.|
T Consensus         5 ~~~l~~f~~~~~~l~~Wl~~~e~~l~~~~~g~dl~~v~~l~~~~~~f~~el~~~~~~~v~~v~~~~~~L~~~~~~~~~~i   84 (323)
T 3edv_A            5 RHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQERVDTVNHLADELINSGHSDAATI   84 (323)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHcCCcCCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHcCCCChHHH
Confidence            45678999999999999999999998889999999999999999999999998 78999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhHHHHHHHHHHHhhhcCccccCCCHHHHHHHHHHhhhHHHHHHH
Q psy6936         230 VRRKEELSEAWMRLKQLALMRQEKLFGAHEIQRFNRDADETVAWIAEKDAVLSSDEYGRDLASVQTLQRKHEGVERDLAA  309 (1032)
Q Consensus       230 ~~~~~~l~~rw~~l~~~~~~r~~~Le~~~~~~~f~~~~~~~~~Wl~~~e~~l~~~~~~~d~~~~~~~l~~~~~l~~ei~~  309 (1032)
                      ...++.|+.+|..|...+..|...|+.+..+.+|..+++++..||.+++..+. .++|.|+..++.++.+|+.|+.++..
T Consensus        85 ~~~~~~l~~~W~~L~~~~~~R~~~L~~a~~~~~f~~~~~e~~~Wl~~k~~~l~-~~~~~d~~~v~~l~~~h~~~~~~l~~  163 (323)
T 3edv_A           85 AEWKDGLNEAWADLLELIDTRTQILAASYELHKFYHDAKEIFGRIQDKHKKLP-EELGRDQNTVETLQRMHTTFEHDIQA  163 (323)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC-CCCCSSHHHHHHHHHHHHHHHHHTHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cccccChHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999899999999999999999998885 67899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHhhhcCCC-CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy6936         310 LEDKVSTLGAEADRLCGIHSD-HGDQIQAKRAEIVEYWERLTGKAKGRKQKLDESYYLHRFLADYRDLISWVSDMKAIIS  388 (1032)
Q Consensus       310 ~~~~l~~l~~~~~~L~~~~~~-~~~~i~~~~~~l~~~w~~l~~~~~~r~~~L~~~~~~~~f~~~~~~l~~Wl~~~e~~l~  388 (1032)
                      +++.|..|...|..|...+|+ ++..|..++..|+.+|..|...+..|...|+.+..++.|...+.++..||.+++..+.
T Consensus       164 ~~~~v~~l~~~a~~L~~~~~~~~~~~i~~~~~~l~~~W~~l~~~~~~r~~~L~~~~~~~~F~~~~~~l~~Wl~~~~~~l~  243 (323)
T 3edv_A          164 LGTQVRQLQEDAARLQAAYAGDKADDIQKRENEVLEAWKSLLDACESRRVRLVDTGDKFRFFSMVRDLMLWMEDVIRQIE  243 (323)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999998875 5788999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCHHHHHHHHHHHHhhHhHHHHhhhhHHHHHHhhhhhhhcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6936         389 ADELAKDVAGAEALLERHQEHKGEIDAREDSFRGTADAGQSLLDRNHYAADDIREKLRNLENDKTHLLTLWEERRILYE  467 (1032)
Q Consensus       389 ~~~~~~d~~~~~~~l~~~~~l~~~l~~~~~~~~~l~~~~~~L~~~~~~~~~~i~~~l~~l~~~w~~l~~~~~~r~~~L~  467 (1032)
                      +.++|.|+.+++.++.+|+.|..+|..+.+.+..+...|..|+..++|.++.|..++..|..+|..|...|.+|+..|.
T Consensus       244 ~~~~~~d~~~~e~ll~~h~~l~~ei~~~~~~~~~l~~~g~~Ll~~~~~~~~~i~~~l~~L~~~w~~l~~~w~~R~~~L~  322 (323)
T 3edv_A          244 AQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKHYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLR  322 (323)
T ss_dssp             TCCCCCSHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            8888999999999999999999999999999999999999999998889999999999999999999999999998875
>1u4q_A Spectrin alpha chain, brain; alpha spectrin, three repeats of spectrin, alpha-helical linker region, 3-helix coiled-coil, structural protein; 2.50A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 Back     alignment and structure
>1u4q_A Spectrin alpha chain, brain; alpha spectrin, three repeats of spectrin, alpha-helical linker region, 3-helix coiled-coil, structural protein; 2.50A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 Back     alignment and structure
>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin, spectrin repeat, three helix bundle, ANKY binding, disease mutation, structural protein, ZU5 sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A Back     alignment and structure
>1hci_A Alpha-actinin 2; triple-helix coiled coil, contractIle protein, muscle, Z- LINE, actin-binding protein; 2.8A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 a.7.1.1 Back     alignment and structure
>3edv_A Spectrin beta chain, brain 1; spectrin repeat, coiled coil, actin capping, actin-binding, alternative splicing, calmodulin-binding, cytoplasm; 1.95A {Homo sapiens} Back     alignment and structure
>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin, spectrin repeat, three helix bundle, ANKY binding, disease mutation, structural protein, ZU5 sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A Back     alignment and structure
>1hci_A Alpha-actinin 2; triple-helix coiled coil, contractIle protein, muscle, Z- LINE, actin-binding protein; 2.8A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 a.7.1.1 Back     alignment and structure
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens} Back     alignment and structure
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens} Back     alignment and structure
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1 Back     alignment and structure
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1 Back     alignment and structure
>1u5p_A Spectrin alpha chain, brain; alpha spectrin, two repeats of spectrin, alpha-helical linker region, 3-helix coiled coil, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 Back     alignment and structure
>1cun_A Protein (alpha spectrin); two repeats of spectrin, alpha helical linker region, 2 tandem 3-helix coiled- coils, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 PDB: 1aj3_A Back     alignment and structure
>1cun_A Protein (alpha spectrin); two repeats of spectrin, alpha helical linker region, 2 tandem 3-helix coiled- coils, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 PDB: 1aj3_A Back     alignment and structure
>3edu_A Beta-I spectrin, spectrin beta chain, erythrocyte; ankyrin, ankyrin-binding domain, actin capping, AC binding, cytoskeleton, disease mutation; 2.10A {Homo sapiens} PDB: 3f57_A Back     alignment and structure
>1u5p_A Spectrin alpha chain, brain; alpha spectrin, two repeats of spectrin, alpha-helical linker region, 3-helix coiled coil, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 Back     alignment and structure
>1s35_A Beta-I spectrin, spectrin beta chain, erythrocyte; two repeats of spectrin, alpha helical linker region, 3- helix coiled-coils, beta spectrin; 2.40A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 Back     alignment and structure
>1s35_A Beta-I spectrin, spectrin beta chain, erythrocyte; two repeats of spectrin, alpha helical linker region, 3- helix coiled-coils, beta spectrin; 2.40A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 Back     alignment and structure
>3fb2_A Spectrin alpha chain, brain spectrin; non-erythroid alpha chain alpha-II spectrin, fordrin alpha chain, sptan1, SPTA2_human, NESG, HR5563A; 2.30A {Homo sapiens} Back     alignment and structure
>3fb2_A Spectrin alpha chain, brain spectrin; non-erythroid alpha chain alpha-II spectrin, fordrin alpha chain, sptan1, SPTA2_human, NESG, HR5563A; 2.30A {Homo sapiens} Back     alignment and structure
>3edu_A Beta-I spectrin, spectrin beta chain, erythrocyte; ankyrin, ankyrin-binding domain, actin capping, AC binding, cytoskeleton, disease mutation; 2.10A {Homo sapiens} PDB: 3f57_A Back     alignment and structure
>1quu_A Human skeletal muscle alpha-actinin 2; triple-helix coiled coil, contractIle protein; 2.50A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 Back     alignment and structure
>1quu_A Human skeletal muscle alpha-actinin 2; triple-helix coiled coil, contractIle protein; 2.50A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 Back     alignment and structure
>2iak_A Bullous pemphigoid antigen 1, isoform 5; triple helical bundle, spectrin repeat, cell adhesion; 3.00A {Mus musculus} Back     alignment and structure
>3pdy_A Plectin; cytoskeleton, plakin, intermediate filament, spectrin repeat structural protein, crosslinking; 2.22A {Homo sapiens} Back     alignment and structure
>2iak_A Bullous pemphigoid antigen 1, isoform 5; triple helical bundle, spectrin repeat, cell adhesion; 3.00A {Mus musculus} Back     alignment and structure
>3pdy_A Plectin; cytoskeleton, plakin, intermediate filament, spectrin repeat structural protein, crosslinking; 2.22A {Homo sapiens} Back     alignment and structure
>3lbx_B Beta-I spectrin, spectrin beta chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens} Back     alignment and structure
>3lbx_B Beta-I spectrin, spectrin beta chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens} Back     alignment and structure
>3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural prote intermediate filament, crosslinking; 2.95A {Homo sapiens} Back     alignment and structure
>3lbx_A Spectrin alpha chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens} PDB: 1owa_A Back     alignment and structure
>3f31_A Spectrin alpha chain, brain; LONE helix followed by A triple helical bundle, actin cappin binding, alternative splicing, calcium; 2.30A {Homo sapiens} SCOP: a.7.1.0 Back     alignment and structure
>3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural prote intermediate filament, crosslinking; 2.95A {Homo sapiens} Back     alignment and structure
>3lbx_A Spectrin alpha chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens} PDB: 1owa_A Back     alignment and structure
>3f31_A Spectrin alpha chain, brain; LONE helix followed by A triple helical bundle, actin cappin binding, alternative splicing, calcium; 2.30A {Homo sapiens} SCOP: a.7.1.0 Back     alignment and structure
>3uun_A Dystrophin; triple helical, cell structure and stability, cytoskeletal, structural protein; 2.30A {Homo sapiens} Back     alignment and structure
>3uul_A Utrophin; spectrin repeat, structural protein, cytoskeletal, helical bundle; 1.95A {Rattus norvegicus} PDB: 3uum_A Back     alignment and structure
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1 Back     alignment and structure
>3uul_A Utrophin; spectrin repeat, structural protein, cytoskeletal, helical bundle; 1.95A {Rattus norvegicus} PDB: 3uum_A Back     alignment and structure
>3uun_A Dystrophin; triple helical, cell structure and stability, cytoskeletal, structural protein; 2.30A {Homo sapiens} Back     alignment and structure
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1 Back     alignment and structure
>2odv_A Plectin 1, HD1; plakin domain, spectrin repeat, cytoskeleton, hemidesmosomes epidermolysis bullosa, structural protein; 2.05A {Homo sapiens} PDB: 2odu_A Back     alignment and structure
>2spc_A Spectrin; cytoskeleton; 1.80A {Drosophila melanogaster} SCOP: a.7.1.1 Back     alignment and structure
>2spc_A Spectrin; cytoskeleton; 1.80A {Drosophila melanogaster} SCOP: a.7.1.1 Back     alignment and structure
>2odv_A Plectin 1, HD1; plakin domain, spectrin repeat, cytoskeleton, hemidesmosomes epidermolysis bullosa, structural protein; 2.05A {Homo sapiens} PDB: 2odu_A Back     alignment and structure
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A* Back     alignment and structure
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A* Back     alignment and structure
>1wlx_A Alpha-actinin 4; three-helix bundle, protein binding; NMR {Homo sapiens} Back     alignment and structure
>1wlx_A Alpha-actinin 4; three-helix bundle, protein binding; NMR {Homo sapiens} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 1032
d2spca_107 a.7.1.1 (A:) Spectrin alpha chain {Drosophila sp. 4e-21
d2spca_107 a.7.1.1 (A:) Spectrin alpha chain {Drosophila sp. 4e-18
d2spca_107 a.7.1.1 (A:) Spectrin alpha chain {Drosophila sp. 9e-18
d2spca_107 a.7.1.1 (A:) Spectrin alpha chain {Drosophila sp. 3e-17
d2spca_107 a.7.1.1 (A:) Spectrin alpha chain {Drosophila sp. 6e-15
d2spca_107 a.7.1.1 (A:) Spectrin alpha chain {Drosophila sp. 8e-15
d2spca_107 a.7.1.1 (A:) Spectrin alpha chain {Drosophila sp. 8e-15
d2spca_107 a.7.1.1 (A:) Spectrin alpha chain {Drosophila sp. 9e-15
d2spca_107 a.7.1.1 (A:) Spectrin alpha chain {Drosophila sp. 2e-14
d1owaa_156 a.7.1.1 (A:) Spectrin alpha chain {Human (Homo sap 4e-21
d1owaa_156 a.7.1.1 (A:) Spectrin alpha chain {Human (Homo sap 3e-17
d1owaa_156 a.7.1.1 (A:) Spectrin alpha chain {Human (Homo sap 5e-14
d1owaa_156 a.7.1.1 (A:) Spectrin alpha chain {Human (Homo sap 3e-13
d1owaa_156 a.7.1.1 (A:) Spectrin alpha chain {Human (Homo sap 6e-13
d1owaa_156 a.7.1.1 (A:) Spectrin alpha chain {Human (Homo sap 8e-13
d1owaa_156 a.7.1.1 (A:) Spectrin alpha chain {Human (Homo sap 4e-12
d1owaa_156 a.7.1.1 (A:) Spectrin alpha chain {Human (Homo sap 1e-11
d1owaa_156 a.7.1.1 (A:) Spectrin alpha chain {Human (Homo sap 9e-10
d1u5pa1110 a.7.1.1 (A:1662-1771) Spectrin alpha chain {Chicke 2e-18
d1u5pa1110 a.7.1.1 (A:1662-1771) Spectrin alpha chain {Chicke 3e-17
d1u5pa1110 a.7.1.1 (A:1662-1771) Spectrin alpha chain {Chicke 8e-16
d1u5pa1110 a.7.1.1 (A:1662-1771) Spectrin alpha chain {Chicke 8e-16
d1u5pa1110 a.7.1.1 (A:1662-1771) Spectrin alpha chain {Chicke 9e-15
d1u5pa1110 a.7.1.1 (A:1662-1771) Spectrin alpha chain {Chicke 2e-14
d1u5pa1110 a.7.1.1 (A:1662-1771) Spectrin alpha chain {Chicke 2e-14
d1u5pa1110 a.7.1.1 (A:1662-1771) Spectrin alpha chain {Chicke 4e-14
d1u5pa1110 a.7.1.1 (A:1662-1771) Spectrin alpha chain {Chicke 5e-14
d1cuna2104 a.7.1.1 (A:116-219) Spectrin alpha chain {Chicken 4e-18
d1cuna2104 a.7.1.1 (A:116-219) Spectrin alpha chain {Chicken 1e-17
d1cuna2104 a.7.1.1 (A:116-219) Spectrin alpha chain {Chicken 2e-17
d1cuna2104 a.7.1.1 (A:116-219) Spectrin alpha chain {Chicken 1e-15
d1cuna2104 a.7.1.1 (A:116-219) Spectrin alpha chain {Chicken 5e-15
d1cuna2104 a.7.1.1 (A:116-219) Spectrin alpha chain {Chicken 8e-15
d1cuna2104 a.7.1.1 (A:116-219) Spectrin alpha chain {Chicken 9e-15
d1cuna2104 a.7.1.1 (A:116-219) Spectrin alpha chain {Chicken 1e-14
d1cuna2104 a.7.1.1 (A:116-219) Spectrin alpha chain {Chicken 1e-14
d1quua1124 a.7.1.1 (A:1-124) alpha-actinin {Human (Homo sapie 1e-17
d1quua1124 a.7.1.1 (A:1-124) alpha-actinin {Human (Homo sapie 5e-17
d1quua1124 a.7.1.1 (A:1-124) alpha-actinin {Human (Homo sapie 1e-15
d1quua1124 a.7.1.1 (A:1-124) alpha-actinin {Human (Homo sapie 2e-15
d1quua1124 a.7.1.1 (A:1-124) alpha-actinin {Human (Homo sapie 3e-15
d1quua1124 a.7.1.1 (A:1-124) alpha-actinin {Human (Homo sapie 1e-13
d1quua1124 a.7.1.1 (A:1-124) alpha-actinin {Human (Homo sapie 5e-13
d1quua1124 a.7.1.1 (A:1-124) alpha-actinin {Human (Homo sapie 2e-12
d1quua1124 a.7.1.1 (A:1-124) alpha-actinin {Human (Homo sapie 2e-12
d1u5pa2101 a.7.1.1 (A:1772-1872) Spectrin alpha chain {Chicke 2e-17
d1u5pa2101 a.7.1.1 (A:1772-1872) Spectrin alpha chain {Chicke 4e-16
d1u5pa2101 a.7.1.1 (A:1772-1872) Spectrin alpha chain {Chicke 5e-16
d1u5pa2101 a.7.1.1 (A:1772-1872) Spectrin alpha chain {Chicke 1e-14
d1u5pa2101 a.7.1.1 (A:1772-1872) Spectrin alpha chain {Chicke 2e-14
d1u5pa2101 a.7.1.1 (A:1772-1872) Spectrin alpha chain {Chicke 2e-14
d1u5pa2101 a.7.1.1 (A:1772-1872) Spectrin alpha chain {Chicke 2e-14
d1u5pa2101 a.7.1.1 (A:1772-1872) Spectrin alpha chain {Chicke 1e-13
d1u5pa2101 a.7.1.1 (A:1772-1872) Spectrin alpha chain {Chicke 8e-13
d1s35a2105 a.7.1.1 (A:1169-1273) Spectrin beta chain {Human ( 7e-17
d1s35a2105 a.7.1.1 (A:1169-1273) Spectrin beta chain {Human ( 1e-15
d1s35a2105 a.7.1.1 (A:1169-1273) Spectrin beta chain {Human ( 5e-15
d1s35a2105 a.7.1.1 (A:1169-1273) Spectrin beta chain {Human ( 1e-13
d1s35a2105 a.7.1.1 (A:1169-1273) Spectrin beta chain {Human ( 1e-12
d1s35a2105 a.7.1.1 (A:1169-1273) Spectrin beta chain {Human ( 5e-12
d1s35a2105 a.7.1.1 (A:1169-1273) Spectrin beta chain {Human ( 8e-12
d1s35a2105 a.7.1.1 (A:1169-1273) Spectrin beta chain {Human ( 3e-11
d1s35a2105 a.7.1.1 (A:1169-1273) Spectrin beta chain {Human ( 3e-11
d1hcia4114 a.7.1.1 (A:633-746) alpha-actinin {Human (Homo sap 2e-16
d1hcia4114 a.7.1.1 (A:633-746) alpha-actinin {Human (Homo sap 2e-15
d1hcia4114 a.7.1.1 (A:633-746) alpha-actinin {Human (Homo sap 1e-11
d1hcia4114 a.7.1.1 (A:633-746) alpha-actinin {Human (Homo sap 2e-10
d1hcia4114 a.7.1.1 (A:633-746) alpha-actinin {Human (Homo sap 2e-10
d1hcia4114 a.7.1.1 (A:633-746) alpha-actinin {Human (Homo sap 2e-08
d1hcia4114 a.7.1.1 (A:633-746) alpha-actinin {Human (Homo sap 2e-07
d1hcia4114 a.7.1.1 (A:633-746) alpha-actinin {Human (Homo sap 2e-06
d1hcia4114 a.7.1.1 (A:633-746) alpha-actinin {Human (Homo sap 2e-06
d1quua2124 a.7.1.1 (A:125-248) alpha-actinin {Human (Homo sap 7e-12
d1quua2124 a.7.1.1 (A:125-248) alpha-actinin {Human (Homo sap 1e-09
d1quua2124 a.7.1.1 (A:125-248) alpha-actinin {Human (Homo sap 1e-09
d1quua2124 a.7.1.1 (A:125-248) alpha-actinin {Human (Homo sap 2e-09
d1quua2124 a.7.1.1 (A:125-248) alpha-actinin {Human (Homo sap 2e-09
d1quua2124 a.7.1.1 (A:125-248) alpha-actinin {Human (Homo sap 3e-08
d1quua2124 a.7.1.1 (A:125-248) alpha-actinin {Human (Homo sap 1e-06
d1s35a1106 a.7.1.1 (A:1063-1168) Spectrin beta chain {Human ( 2e-11
d1s35a1106 a.7.1.1 (A:1063-1168) Spectrin beta chain {Human ( 4e-11
d1s35a1106 a.7.1.1 (A:1063-1168) Spectrin beta chain {Human ( 4e-11
d1s35a1106 a.7.1.1 (A:1063-1168) Spectrin beta chain {Human ( 5e-11
d1s35a1106 a.7.1.1 (A:1063-1168) Spectrin beta chain {Human ( 1e-10
d1s35a1106 a.7.1.1 (A:1063-1168) Spectrin beta chain {Human ( 2e-10
d1s35a1106 a.7.1.1 (A:1063-1168) Spectrin beta chain {Human ( 8e-10
d1s35a1106 a.7.1.1 (A:1063-1168) Spectrin beta chain {Human ( 2e-09
d1s35a1106 a.7.1.1 (A:1063-1168) Spectrin beta chain {Human ( 1e-07
>d2spca_ a.7.1.1 (A:) Spectrin alpha chain {Drosophila sp. [TaxId: 7242]} Length = 107 Back     information, alignment and structure

class: All alpha proteins
fold: Spectrin repeat-like
superfamily: Spectrin repeat
family: Spectrin repeat
domain: Spectrin alpha chain
species: Drosophila sp. [TaxId: 7242]

 Score = 87.3 bits (216), Expect = 4e-21
 Identities = 48/107 (44%), Positives = 72/107 (67%)

Query: 468 QCMDLQLFYRDTEQADTWMAKQEAFLSNEDLGDSLDSVEALIKKHEDFEKSLAAQEEKIK 527
           Q +DLQL+ RD E A++WM+ +EAFL+ +D  ++  +VEALIKKHEDF+K++   E+KI 
Sbjct: 1   QNLDLQLYMRDCELAESWMSAREAFLNADDDANAGGNVEALIKKHEDFDKAINGHEQKIA 60

Query: 528 ALDEFATKLIEGQHYAADDVAQRRDLLLKRRAGLLEKSARRRAILED 574
           AL   A +LI   HYA++ V ++R  +L+R   L E    +R+ L D
Sbjct: 61  ALQTVADQLIAQNHYASNLVDEKRKQVLERWRHLKEGLIEKRSRLGD 107
>d2spca_ a.7.1.1 (A:) Spectrin alpha chain {Drosophila sp. [TaxId: 7242]} Length = 107 Back     information, alignment and structure
>d2spca_ a.7.1.1 (A:) Spectrin alpha chain {Drosophila sp. [TaxId: 7242]} Length = 107 Back     information, alignment and structure
>d2spca_ a.7.1.1 (A:) Spectrin alpha chain {Drosophila sp. [TaxId: 7242]} Length = 107 Back     information, alignment and structure
>d2spca_ a.7.1.1 (A:) Spectrin alpha chain {Drosophila sp. [TaxId: 7242]} Length = 107 Back     information, alignment and structure
>d2spca_ a.7.1.1 (A:) Spectrin alpha chain {Drosophila sp. [TaxId: 7242]} Length = 107 Back     information, alignment and structure
>d2spca_ a.7.1.1 (A:) Spectrin alpha chain {Drosophila sp. [TaxId: 7242]} Length = 107 Back     information, alignment and structure
>d2spca_ a.7.1.1 (A:) Spectrin alpha chain {Drosophila sp. [TaxId: 7242]} Length = 107 Back     information, alignment and structure
>d2spca_ a.7.1.1 (A:) Spectrin alpha chain {Drosophila sp. [TaxId: 7242]} Length = 107 Back     information, alignment and structure
>d1owaa_ a.7.1.1 (A:) Spectrin alpha chain {Human (Homo sapiens) [TaxId: 9606]} Length = 156 Back     information, alignment and structure
>d1owaa_ a.7.1.1 (A:) Spectrin alpha chain {Human (Homo sapiens) [TaxId: 9606]} Length = 156 Back     information, alignment and structure
>d1owaa_ a.7.1.1 (A:) Spectrin alpha chain {Human (Homo sapiens) [TaxId: 9606]} Length = 156 Back     information, alignment and structure
>d1owaa_ a.7.1.1 (A:) Spectrin alpha chain {Human (Homo sapiens) [TaxId: 9606]} Length = 156 Back     information, alignment and structure
>d1owaa_ a.7.1.1 (A:) Spectrin alpha chain {Human (Homo sapiens) [TaxId: 9606]} Length = 156 Back     information, alignment and structure
>d1owaa_ a.7.1.1 (A:) Spectrin alpha chain {Human (Homo sapiens) [TaxId: 9606]} Length = 156 Back     information, alignment and structure
>d1owaa_ a.7.1.1 (A:) Spectrin alpha chain {Human (Homo sapiens) [TaxId: 9606]} Length = 156 Back     information, alignment and structure
>d1owaa_ a.7.1.1 (A:) Spectrin alpha chain {Human (Homo sapiens) [TaxId: 9606]} Length = 156 Back     information, alignment and structure
>d1owaa_ a.7.1.1 (A:) Spectrin alpha chain {Human (Homo sapiens) [TaxId: 9606]} Length = 156 Back     information, alignment and structure
>d1u5pa1 a.7.1.1 (A:1662-1771) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]} Length = 110 Back     information, alignment and structure
>d1u5pa1 a.7.1.1 (A:1662-1771) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]} Length = 110 Back     information, alignment and structure
>d1u5pa1 a.7.1.1 (A:1662-1771) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]} Length = 110 Back     information, alignment and structure
>d1u5pa1 a.7.1.1 (A:1662-1771) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]} Length = 110 Back     information, alignment and structure
>d1u5pa1 a.7.1.1 (A:1662-1771) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]} Length = 110 Back     information, alignment and structure
>d1u5pa1 a.7.1.1 (A:1662-1771) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]} Length = 110 Back     information, alignment and structure
>d1u5pa1 a.7.1.1 (A:1662-1771) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]} Length = 110 Back     information, alignment and structure
>d1u5pa1 a.7.1.1 (A:1662-1771) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]} Length = 110 Back     information, alignment and structure
>d1u5pa1 a.7.1.1 (A:1662-1771) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]} Length = 110 Back     information, alignment and structure
>d1cuna2 a.7.1.1 (A:116-219) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]} Length = 104 Back     information, alignment and structure
>d1cuna2 a.7.1.1 (A:116-219) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]} Length = 104 Back     information, alignment and structure
>d1cuna2 a.7.1.1 (A:116-219) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]} Length = 104 Back     information, alignment and structure
>d1cuna2 a.7.1.1 (A:116-219) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]} Length = 104 Back     information, alignment and structure
>d1cuna2 a.7.1.1 (A:116-219) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]} Length = 104 Back     information, alignment and structure
>d1cuna2 a.7.1.1 (A:116-219) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]} Length = 104 Back     information, alignment and structure
>d1cuna2 a.7.1.1 (A:116-219) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]} Length = 104 Back     information, alignment and structure
>d1cuna2 a.7.1.1 (A:116-219) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]} Length = 104 Back     information, alignment and structure
>d1cuna2 a.7.1.1 (A:116-219) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]} Length = 104 Back     information, alignment and structure
>d1quua1 a.7.1.1 (A:1-124) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]} Length = 124 Back     information, alignment and structure
>d1quua1 a.7.1.1 (A:1-124) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]} Length = 124 Back     information, alignment and structure
>d1quua1 a.7.1.1 (A:1-124) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]} Length = 124 Back     information, alignment and structure
>d1quua1 a.7.1.1 (A:1-124) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]} Length = 124 Back     information, alignment and structure
>d1quua1 a.7.1.1 (A:1-124) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]} Length = 124 Back     information, alignment and structure
>d1quua1 a.7.1.1 (A:1-124) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]} Length = 124 Back     information, alignment and structure
>d1quua1 a.7.1.1 (A:1-124) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]} Length = 124 Back     information, alignment and structure
>d1quua1 a.7.1.1 (A:1-124) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]} Length = 124 Back     information, alignment and structure
>d1quua1 a.7.1.1 (A:1-124) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]} Length = 124 Back     information, alignment and structure
>d1u5pa2 a.7.1.1 (A:1772-1872) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]} Length = 101 Back     information, alignment and structure
>d1u5pa2 a.7.1.1 (A:1772-1872) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]} Length = 101 Back     information, alignment and structure
>d1u5pa2 a.7.1.1 (A:1772-1872) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]} Length = 101 Back     information, alignment and structure
>d1u5pa2 a.7.1.1 (A:1772-1872) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]} Length = 101 Back     information, alignment and structure
>d1u5pa2 a.7.1.1 (A:1772-1872) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]} Length = 101 Back     information, alignment and structure
>d1u5pa2 a.7.1.1 (A:1772-1872) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]} Length = 101 Back     information, alignment and structure
>d1u5pa2 a.7.1.1 (A:1772-1872) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]} Length = 101 Back     information, alignment and structure
>d1u5pa2 a.7.1.1 (A:1772-1872) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]} Length = 101 Back     information, alignment and structure
>d1u5pa2 a.7.1.1 (A:1772-1872) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]} Length = 101 Back     information, alignment and structure
>d1s35a2 a.7.1.1 (A:1169-1273) Spectrin beta chain {Human (Homo sapiens) [TaxId: 9606]} Length = 105 Back     information, alignment and structure
>d1s35a2 a.7.1.1 (A:1169-1273) Spectrin beta chain {Human (Homo sapiens) [TaxId: 9606]} Length = 105 Back     information, alignment and structure
>d1s35a2 a.7.1.1 (A:1169-1273) Spectrin beta chain {Human (Homo sapiens) [TaxId: 9606]} Length = 105 Back     information, alignment and structure
>d1s35a2 a.7.1.1 (A:1169-1273) Spectrin beta chain {Human (Homo sapiens) [TaxId: 9606]} Length = 105 Back     information, alignment and structure
>d1s35a2 a.7.1.1 (A:1169-1273) Spectrin beta chain {Human (Homo sapiens) [TaxId: 9606]} Length = 105 Back     information, alignment and structure
>d1s35a2 a.7.1.1 (A:1169-1273) Spectrin beta chain {Human (Homo sapiens) [TaxId: 9606]} Length = 105 Back     information, alignment and structure
>d1s35a2 a.7.1.1 (A:1169-1273) Spectrin beta chain {Human (Homo sapiens) [TaxId: 9606]} Length = 105 Back     information, alignment and structure
>d1s35a2 a.7.1.1 (A:1169-1273) Spectrin beta chain {Human (Homo sapiens) [TaxId: 9606]} Length = 105 Back     information, alignment and structure
>d1s35a2 a.7.1.1 (A:1169-1273) Spectrin beta chain {Human (Homo sapiens) [TaxId: 9606]} Length = 105 Back     information, alignment and structure
>d1hcia4 a.7.1.1 (A:633-746) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]} Length = 114 Back     information, alignment and structure
>d1hcia4 a.7.1.1 (A:633-746) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]} Length = 114 Back     information, alignment and structure
>d1hcia4 a.7.1.1 (A:633-746) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]} Length = 114 Back     information, alignment and structure
>d1hcia4 a.7.1.1 (A:633-746) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]} Length = 114 Back     information, alignment and structure
>d1hcia4 a.7.1.1 (A:633-746) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]} Length = 114 Back     information, alignment and structure
>d1hcia4 a.7.1.1 (A:633-746) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]} Length = 114 Back     information, alignment and structure
>d1hcia4 a.7.1.1 (A:633-746) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]} Length = 114 Back     information, alignment and structure
>d1hcia4 a.7.1.1 (A:633-746) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]} Length = 114 Back     information, alignment and structure
>d1hcia4 a.7.1.1 (A:633-746) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]} Length = 114 Back     information, alignment and structure
>d1quua2 a.7.1.1 (A:125-248) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]} Length = 124 Back     information, alignment and structure
>d1quua2 a.7.1.1 (A:125-248) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]} Length = 124 Back     information, alignment and structure
>d1quua2 a.7.1.1 (A:125-248) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]} Length = 124 Back     information, alignment and structure
>d1quua2 a.7.1.1 (A:125-248) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]} Length = 124 Back     information, alignment and structure
>d1quua2 a.7.1.1 (A:125-248) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]} Length = 124 Back     information, alignment and structure
>d1quua2 a.7.1.1 (A:125-248) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]} Length = 124 Back     information, alignment and structure
>d1quua2 a.7.1.1 (A:125-248) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]} Length = 124 Back     information, alignment and structure
>d1s35a1 a.7.1.1 (A:1063-1168) Spectrin beta chain {Human (Homo sapiens) [TaxId: 9606]} Length = 106 Back     information, alignment and structure
>d1s35a1 a.7.1.1 (A:1063-1168) Spectrin beta chain {Human (Homo sapiens) [TaxId: 9606]} Length = 106 Back     information, alignment and structure
>d1s35a1 a.7.1.1 (A:1063-1168) Spectrin beta chain {Human (Homo sapiens) [TaxId: 9606]} Length = 106 Back     information, alignment and structure
>d1s35a1 a.7.1.1 (A:1063-1168) Spectrin beta chain {Human (Homo sapiens) [TaxId: 9606]} Length = 106 Back     information, alignment and structure
>d1s35a1 a.7.1.1 (A:1063-1168) Spectrin beta chain {Human (Homo sapiens) [TaxId: 9606]} Length = 106 Back     information, alignment and structure
>d1s35a1 a.7.1.1 (A:1063-1168) Spectrin beta chain {Human (Homo sapiens) [TaxId: 9606]} Length = 106 Back     information, alignment and structure
>d1s35a1 a.7.1.1 (A:1063-1168) Spectrin beta chain {Human (Homo sapiens) [TaxId: 9606]} Length = 106 Back     information, alignment and structure
>d1s35a1 a.7.1.1 (A:1063-1168) Spectrin beta chain {Human (Homo sapiens) [TaxId: 9606]} Length = 106 Back     information, alignment and structure
>d1s35a1 a.7.1.1 (A:1063-1168) Spectrin beta chain {Human (Homo sapiens) [TaxId: 9606]} Length = 106 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query1032
d1owaa_156 Spectrin alpha chain {Human (Homo sapiens) [TaxId: 99.6
d1owaa_156 Spectrin alpha chain {Human (Homo sapiens) [TaxId: 99.51
d1u5pa1110 Spectrin alpha chain {Chicken (Gallus gallus) [Tax 99.36
d1cuna2104 Spectrin alpha chain {Chicken (Gallus gallus) [Tax 99.36
d1s35a2105 Spectrin beta chain {Human (Homo sapiens) [TaxId: 99.35
d1cuna2104 Spectrin alpha chain {Chicken (Gallus gallus) [Tax 99.32
d1u5pa2101 Spectrin alpha chain {Chicken (Gallus gallus) [Tax 99.31
d1u5pa1110 Spectrin alpha chain {Chicken (Gallus gallus) [Tax 99.3
d1s35a2105 Spectrin beta chain {Human (Homo sapiens) [TaxId: 99.29
d1quua1124 alpha-actinin {Human (Homo sapiens) [TaxId: 9606]} 99.29
d1quua1124 alpha-actinin {Human (Homo sapiens) [TaxId: 9606]} 99.27
d1u5pa2101 Spectrin alpha chain {Chicken (Gallus gallus) [Tax 99.27
d1s35a1106 Spectrin beta chain {Human (Homo sapiens) [TaxId: 99.26
d1hcia4114 alpha-actinin {Human (Homo sapiens) [TaxId: 9606]} 99.25
d1s35a1106 Spectrin beta chain {Human (Homo sapiens) [TaxId: 99.23
d2spca_107 Spectrin alpha chain {Drosophila sp. [TaxId: 7242] 99.19
d1hcia4114 alpha-actinin {Human (Homo sapiens) [TaxId: 9606]} 99.19
d1quua2124 alpha-actinin {Human (Homo sapiens) [TaxId: 9606]} 99.15
d2spca_107 Spectrin alpha chain {Drosophila sp. [TaxId: 7242] 99.12
d1quua2124 alpha-actinin {Human (Homo sapiens) [TaxId: 9606]} 99.1
d1hcia1125 alpha-actinin {Human (Homo sapiens) [TaxId: 9606]} 96.03
d1hcia1125 alpha-actinin {Human (Homo sapiens) [TaxId: 9606]} 95.11
>d1owaa_ a.7.1.1 (A:) Spectrin alpha chain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: All alpha proteins
fold: Spectrin repeat-like
superfamily: Spectrin repeat
family: Spectrin repeat
domain: Spectrin alpha chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=1.1e-15  Score=143.71  Aligned_cols=148  Identities=45%  Similarity=0.688  Sum_probs=139.1

Q ss_pred             CCCccchhcccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCCChhhH
Q psy6936           2 DQITVKEVKILETANDIQERREQVLNRYADFKSEARSKREKLEDSRRFQYFKRDADELESWIYEKLQAASDESYKETTNL   81 (1032)
Q Consensus         2 ~~~~~~~~~~~~~~~~i~~~l~~l~~r~~~l~~~~~~r~~~L~~~~~~~~f~~~~~~~~~Wl~~~~~~l~~~~~~~~~~~   81 (1032)
                      ..+..+|+++++.+..|+.++..|..+|+.|...+.+|..+|+.+..++.|...++.+..||.+++..+.++.++++..+
T Consensus         8 ~~~~~~g~~l~e~~~~i~~~~~~l~~rw~~L~~~~~~R~~~Le~~~~~~~F~~~~~~l~~Wl~e~e~~~~~~~~~d~~~~   87 (156)
T d1owaa_           8 TVVESSGPKVLETAEEIQERRQEVLTRYQSFKERVAERGQKLEDSYHLQVFKRDADDLGKWIMEKVNILTDKSYEDPTNI   87 (156)
T ss_dssp             CCTTSSSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSCH
T ss_pred             HHHHHhhhHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCHHHH
Confidence            46788999999999999999999999999999999999999999888889999999999999998888877666788999


Q ss_pred             HHHHHhhHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHhHhHH
Q psy6936          82 QAKIQKHQAFEAEVAAHSNAIVVLDNTGKEMINQNHFASEVIRKRLEELHRLWELLLSKLAEKGMKLQ  149 (1032)
Q Consensus        82 ~~~l~~~~~l~~el~~~~~~v~~l~~~~~~L~~~~~~~~~~i~~~l~~L~~~w~~L~~~~~~r~~~L~  149 (1032)
                      +.++.+|+.|..+|..+++.|..+...|..|+..++++++.|+.++..|+.+|+.|...+.+|...|.
T Consensus        88 ~~~~~~h~~l~~ei~~~~~~~~~l~~~g~~L~~~~~~~~~~i~~~l~~l~~~W~~L~~~~~~R~~~L~  155 (156)
T d1owaa_          88 QGKYQKHQSLEAEVQTKSRLMSELEKTREERFTMGHSAHEETKAHIEELRHLWDLLLELTLEKGDQLL  155 (156)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence            99999999999999999999999999999999888888999999999999999999999999988774
>d1owaa_ a.7.1.1 (A:) Spectrin alpha chain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1u5pa1 a.7.1.1 (A:1662-1771) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d1cuna2 a.7.1.1 (A:116-219) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d1s35a2 a.7.1.1 (A:1169-1273) Spectrin beta chain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1cuna2 a.7.1.1 (A:116-219) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d1u5pa2 a.7.1.1 (A:1772-1872) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d1u5pa1 a.7.1.1 (A:1662-1771) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d1s35a2 a.7.1.1 (A:1169-1273) Spectrin beta chain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1quua1 a.7.1.1 (A:1-124) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1quua1 a.7.1.1 (A:1-124) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1u5pa2 a.7.1.1 (A:1772-1872) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d1s35a1 a.7.1.1 (A:1063-1168) Spectrin beta chain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1hcia4 a.7.1.1 (A:633-746) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1s35a1 a.7.1.1 (A:1063-1168) Spectrin beta chain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2spca_ a.7.1.1 (A:) Spectrin alpha chain {Drosophila sp. [TaxId: 7242]} Back     information, alignment and structure
>d1hcia4 a.7.1.1 (A:633-746) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1quua2 a.7.1.1 (A:125-248) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2spca_ a.7.1.1 (A:) Spectrin alpha chain {Drosophila sp. [TaxId: 7242]} Back     information, alignment and structure
>d1quua2 a.7.1.1 (A:125-248) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1hcia1 a.7.1.1 (A:272-396) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1hcia1 a.7.1.1 (A:272-396) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure