Psyllid ID: psy6963

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210--
MNVPWNIIFISPVLLRLPLGSSLPNTAEHFPDNNEGEEKKYGGGRQEEEKKEEEEEDKEKCSGEEDSHPSGFSFAMGQTLTEPVTNKDSSSVQNPLYKVGASCMQGWRITMEDAHSHILSLPDDPGTAFFAVYDGHGGSKIAQFAGKHLHKYIVKTREFKEGNITEALKKGFMDLDAAMLDDDALKDELAGTTAICILIKDNILYCRNVRGL
ccccccccccccEEEcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccEEEEEEcccccccccccEEEEEcccccccccEEEEEEcccccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEEEccEEEEEEcccc
cccccEEEEEccEEEEccccccccccccccccccccccEcccccccHHHcHHHHHHcHHcccccccccccccccccccccccccEEEEcccccccEEEEEEEcccccEEEccccHEEEEccccccccEEEEEEccccHHHHHHHHHHHHHHHHHccHHHHcccHHHHHHHHHHHHHHHHHcccHccccccccEEEEEEEEccEEEEEEcccc
mnvpwniifispvllrlplgsslpntaehfpdnnegeekkygggrqeeekkeeeeedkekcsgeedshpsgfsfamgqtltepvtnkdsssvqnplykVGASCMQGWRITMEDAHShilslpddpgtaffavydghggskiAQFAGKHLHKYIVKTREFKEGNITEALKKGFMDldaamldddalkdELAGTTAICILIKDNILycrnvrgl
MNVPWNIIFISPVLLRLPLGSSLpntaehfpdnnegeekkygggrqeeekkeeeeedkekcsgeedshpsgFSFAMGQTLTEPVTNKDSSSVQNPLYKVGASCMQGWRITMEDAHSHILSLPDDPGTAFFAVYDGHGGSKIAQFAGKHLHKYIVKtrefkegniTEALKKGFMDLDAAMLDDDALKDELAGTTAIcilikdnilYCRNVRGL
MNVPWNIIFISPVLLRLPLGSSLPNTAEHFPDNNegeekkygggrqeeekkeeeeedkekcsgeeDSHPSGFSFAMGQTLTEPVTNKDSSSVQNPLYKVGASCMQGWRITMEDAHSHILSLPDDPGTAFFAVYDGHGGSKIAQFAGKHLHKYIVKTREFKEGNITEALKKGFMdldaamldddalkdelaGTTAICILIKDNILYCRNVRGL
**VPWNIIFISPVLLRLPL****************************************************************************LYKVGASCMQGWRITMEDAHSHILSLPDDPGTAFFAVYDGHGGSKIAQFAGKHLHKYIVKTREFKEGNITEALKKGFMDLDAAMLDDDALKDELAGTTAICILIKDNILYCRNV***
***PW**IFI********************************************************************************SVQNPLYKVGASCMQGWRITMEDAHSHILSLPDDPGTAFFAVYDGHGGSKIAQFAGKHLHKYIVKTREFKEGNITEALKKGFMDLDAAMLDDD***DELAGTTAICILIKDNILYCRNVRGL
MNVPWNIIFISPVLLRLPLGSSLPNTAEHFPDNNE**********************************SGFSFAMGQTLTEP*********QNPLYKVGASCMQGWRITMEDAHSHILSLPDDPGTAFFAVYDGHGGSKIAQFAGKHLHKYIVKTREFKEGNITEALKKGFMDLDAAMLDDDALKDELAGTTAICILIKDNILYCRNVRGL
*NVPWNIIFISPVLLRLPLGSSLPNTAEHF****************************************G**FAMGQTLTEPVTNKDSSSVQNPLYKVGASCMQGWRITMEDAHSHILSLPDDPGTAFFAVYDGHGGSKIAQFAGKHLHKYIVKTREFKEGNITEALKKGFMDLDAAMLDDDALKDELAGTTAICILIKDNILYCRNVRG*
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MNVPWNIIFISPVLLRLPLGSSLPNTAEHFPDNNEGEEKKYGGxxxxxxxxxxxxxxxxxxxxxEDSHPSGFSFAMGQTLTEPVTNKDSSSVQNPLYKVGASCMQGWRITMEDAHSHILSLPDDPGTAFFAVYDGHGGSKIAQFAGKHLHKYIVKTREFKEGNITEALKKGFMDLDAAMLDDDALKDELAGTTAICILIKDNILYCRNVRGL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query212 2.2.26 [Sep-21-2011]
P49596 356 Probable protein phosphat yes N/A 0.627 0.373 0.609 9e-46
Q09173 414 Protein phosphatase 2C ho yes N/A 0.627 0.321 0.485 3e-29
Q09172 370 Protein phosphatase 2C ho no N/A 0.632 0.362 0.446 6e-27
P39966 464 Protein phosphatase 2C ho yes N/A 0.627 0.286 0.376 9e-23
P34221 468 Protein phosphatase 2C ho no N/A 0.627 0.284 0.376 1e-21
Q7K4Q5 662 Probable protein phosphat no N/A 0.490 0.157 0.452 3e-20
O81716 355 Probable protein phosphat yes N/A 0.481 0.287 0.442 3e-20
A0CUB5 295 Probable protein phosphat N/A N/A 0.617 0.444 0.376 2e-19
Q67UP9 368 Probable protein phosphat yes N/A 0.481 0.277 0.432 6e-19
A0DSB3 295 Probable protein phosphat N/A N/A 0.622 0.447 0.372 6e-19
>sp|P49596|PP2C2_CAEEL Probable protein phosphatase 2C T23F11.1 OS=Caenorhabditis elegans GN=T23F11.1 PE=3 SV=2 Back     alignment and function desciption
 Score =  183 bits (464), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 81/133 (60%), Positives = 108/133 (81%)

Query: 76  MGQTLTEPVTNKDSSSVQNPLYKVGASCMQGWRITMEDAHSHILSLPDDPGTAFFAVYDG 135
           MGQTL+EPVT K+S+S  N  Y VG+SCMQGWR+ MEDAH+H+LSLPDDP  AFFAVYDG
Sbjct: 1   MGQTLSEPVTKKESASCANENYLVGSSCMQGWRVDMEDAHTHLLSLPDDPKCAFFAVYDG 60

Query: 136 HGGSKIAQFAGKHLHKYIVKTREFKEGNITEALKKGFMDLDAAMLDDDALKDELAGTTAI 195
           HGGSK++Q++G +LHK +V  +EF EGN+ EA++KGF++LD  M  D+  KD+++GTTA+
Sbjct: 61  HGGSKVSQYSGINLHKKVVAQKEFSEGNMKEAIEKGFLELDQQMRVDEETKDDVSGTTAV 120

Query: 196 CILIKDNILYCRN 208
            +LIK+  +YC N
Sbjct: 121 VVLIKEGDVYCGN 133

Caenorhabditis elegans (taxid: 6239)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6
>sp|Q09173|PP2C3_SCHPO Protein phosphatase 2C homolog 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ptc3 PE=3 SV=1 Back     alignment and function description
>sp|Q09172|PP2C2_SCHPO Protein phosphatase 2C homolog 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ptc2 PE=3 SV=1 Back     alignment and function description
>sp|P39966|PP2C2_YEAST Protein phosphatase 2C homolog 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PTC2 PE=1 SV=1 Back     alignment and function description
>sp|P34221|PP2C3_YEAST Protein phosphatase 2C homolog 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PTC3 PE=1 SV=4 Back     alignment and function description
>sp|Q7K4Q5|Y0417_DROME Probable protein phosphatase CG10417 OS=Drosophila melanogaster GN=CG10417 PE=1 SV=1 Back     alignment and function description
>sp|O81716|P2C21_ARATH Probable protein phosphatase 2C 21 OS=Arabidopsis thaliana GN=PPC4-2 PE=2 SV=1 Back     alignment and function description
>sp|A0CUB5|PP2C5_PARTE Probable protein phosphatase 2C 5 OS=Paramecium tetraurelia GN=GSPATT00010582001 PE=3 SV=1 Back     alignment and function description
>sp|Q67UP9|P2C58_ORYSJ Probable protein phosphatase 2C 58 OS=Oryza sativa subsp. japonica GN=Os06g0651600 PE=2 SV=1 Back     alignment and function description
>sp|A0DSB3|PP2C6_PARTE Probable protein phosphatase 2C 6 OS=Paramecium tetraurelia GN=GSPATT00019634001 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query212
357616299310 hypothetical protein KGM_12120 [Danaus p 0.632 0.432 0.656 2e-49
195454859 391 GK10512 [Drosophila willistoni] gi|19417 0.627 0.340 0.639 4e-49
380020111 326 PREDICTED: probable protein phosphatase 0.627 0.407 0.669 6e-49
350398785 329 PREDICTED: probable protein phosphatase 0.646 0.416 0.664 9e-49
383855820 322 PREDICTED: probable protein phosphatase 0.627 0.413 0.684 1e-48
328784243 329 PREDICTED: probable protein phosphatase 0.646 0.416 0.649 1e-48
340714910 329 PREDICTED: probable protein phosphatase 0.646 0.416 0.664 1e-48
350398788 316 PREDICTED: probable protein phosphatase 0.627 0.420 0.676 2e-48
340714908 316 PREDICTED: probable protein phosphatase 0.627 0.420 0.676 2e-48
195402977 329 GJ15526 [Drosophila virilis] gi|19414187 0.627 0.404 0.631 4e-48
>gi|357616299|gb|EHJ70118.1| hypothetical protein KGM_12120 [Danaus plexippus] Back     alignment and taxonomy information
 Score =  200 bits (509), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 88/134 (65%), Positives = 115/134 (85%)

Query: 76  MGQTLTEPVTNKDSSSVQNPLYKVGASCMQGWRITMEDAHSHILSLPDDPGTAFFAVYDG 135
           MGQTL+EPVT+K SS+ Q+  Y VG+SCMQGWR++M+D+H+ ILSLPDDPGTAFFAVYDG
Sbjct: 1   MGQTLSEPVTDKQSSTCQDTHYLVGSSCMQGWRVSMDDSHTQILSLPDDPGTAFFAVYDG 60

Query: 136 HGGSKIAQFAGKHLHKYIVKTREFKEGNITEALKKGFMDLDAAMLDDDALKDELAGTTAI 195
           HGG+ IA++AGKHLHK+I    E+  GNI EALK+GF+DLD AML+++ +K+++AG+TA+
Sbjct: 61  HGGANIAEYAGKHLHKFITARPEYHLGNIEEALKQGFLDLDQAMLEENCMKEKVAGSTAV 120

Query: 196 CILIKDNILYCRNV 209
            +LIKDN LYC NV
Sbjct: 121 VVLIKDNTLYCANV 134

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|195454859|ref|XP_002074440.1| GK10512 [Drosophila willistoni] gi|194170525|gb|EDW85426.1| GK10512 [Drosophila willistoni] Back     alignment and taxonomy information
>gi|380020111|ref|XP_003693939.1| PREDICTED: probable protein phosphatase 2C T23F11.1-like [Apis florea] Back     alignment and taxonomy information
>gi|350398785|ref|XP_003485304.1| PREDICTED: probable protein phosphatase 2C T23F11.1-like isoform 1 [Bombus impatiens] Back     alignment and taxonomy information
>gi|383855820|ref|XP_003703408.1| PREDICTED: probable protein phosphatase 2C T23F11.1-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|328784243|ref|XP_623418.2| PREDICTED: probable protein phosphatase 2C T23F11.1-like [Apis mellifera] Back     alignment and taxonomy information
>gi|340714910|ref|XP_003395965.1| PREDICTED: probable protein phosphatase 2C T23F11.1-like isoform 2 [Bombus terrestris] Back     alignment and taxonomy information
>gi|350398788|ref|XP_003485305.1| PREDICTED: probable protein phosphatase 2C T23F11.1-like isoform 2 [Bombus impatiens] Back     alignment and taxonomy information
>gi|340714908|ref|XP_003395964.1| PREDICTED: probable protein phosphatase 2C T23F11.1-like isoform 1 [Bombus terrestris] Back     alignment and taxonomy information
>gi|195402977|ref|XP_002060075.1| GJ15526 [Drosophila virilis] gi|194141873|gb|EDW58286.1| GJ15526 [Drosophila virilis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query212
FB|FBgn0035425 371 CG17746 [Drosophila melanogast 0.622 0.355 0.586 1.2e-40
WB|WBGene00011953 356 ppm-2 [Caenorhabditis elegans 0.627 0.373 0.563 1.3e-38
FB|FBgn0035143 352 Ppm1 "Ppm1" [Drosophila melano 0.627 0.377 0.556 4.3e-38
POMBASE|SPAC2G11.07c 414 ptc3 "protein phosphatase 2c h 0.622 0.318 0.445 4.9e-24
POMBASE|SPCC1223.11 370 ptc2 "protein phosphatase 2C P 0.627 0.359 0.427 2.9e-23
ASPGD|ASPL0000056464 420 AN1358 [Emericella nidulans (t 0.603 0.304 0.439 3.8e-23
TAIR|locus:2047344 355 AT2G25070 [Arabidopsis thalian 0.448 0.267 0.453 6.4e-22
SGD|S000000891 464 PTC2 "Type 2C protein phosphat 0.627 0.286 0.347 6.5e-18
FB|FBgn0033021 662 CG10417 [Drosophila melanogast 0.452 0.145 0.459 2.4e-17
TAIR|locus:2116777 357 AT4G31860 [Arabidopsis thalian 0.448 0.266 0.422 5.2e-17
FB|FBgn0035425 CG17746 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
 Identities = 78/133 (58%), Positives = 100/133 (75%)

Query:    76 MGQTLTEPVTNKDSSSVQNPLYKVGASCMQGWRITMEDAHSHILSLPDDPGTAFFAVYDG 135
             MGQTL+EPVT K+S+  QN  Y+VG+SCMQGWRI MED+H+HILSLPDDPG AFFAVYDG
Sbjct:     1 MGQTLSEPVTAKESAYCQNAAYRVGSSCMQGWRINMEDSHTHILSLPDDPGAAFFAVYDG 60

Query:   136 HGGSKIAQFAGKHLHKYIVKTREFKEGNITEALKKGFMXXXXXXXXXXXXXXXXXGTTAI 195
             HGG+ +AQ+AGKHLHKY++K  E+ + NI +AL++GF+                 G+TA+
Sbjct:    61 HGGATVAQYAGKHLHKYVLKRPEYND-NIEQALQQGFLDIDYVMLRNKTCGDQMAGSTAV 119

Query:   196 CILIKDNILYCRN 208
              +L+KDN LYC N
Sbjct:   120 VVLVKDNKLYCAN 132
GO:0006470 "protein dephosphorylation" evidence=IEA;NAS
GO:0004722 "protein serine/threonine phosphatase activity" evidence=IEA;NAS
WB|WBGene00011953 ppm-2 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
FB|FBgn0035143 Ppm1 "Ppm1" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
POMBASE|SPAC2G11.07c ptc3 "protein phosphatase 2c homolog 3" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
POMBASE|SPCC1223.11 ptc2 "protein phosphatase 2C Ptc2" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
ASPGD|ASPL0000056464 AN1358 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
TAIR|locus:2047344 AT2G25070 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
SGD|S000000891 PTC2 "Type 2C protein phosphatase (PP2C)" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms
FB|FBgn0033021 CG10417 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
TAIR|locus:2116777 AT4G31860 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P49596PP2C2_CAEEL3, ., 1, ., 3, ., 1, 60.60900.62730.3735yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.30.691

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query212
cd00143 254 cd00143, PP2Cc, Serine/threonine phosphatases, fam 7e-31
smart00332 252 smart00332, PP2Cc, Serine/threonine phosphatases, 5e-30
pfam00481 252 pfam00481, PP2C, Protein phosphatase 2C 4e-26
COG0631 262 COG0631, PTC1, Serine/threonine protein phosphatas 7e-18
PLN03145 365 PLN03145, PLN03145, Protein phosphatase 2c; Provis 2e-12
PTZ00224 381 PTZ00224, PTZ00224, protein phosphatase 2C; Provis 2e-12
>gnl|CDD|238083 cd00143, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information 
 Score =  113 bits (284), Expect = 7e-31
 Identities = 43/119 (36%), Positives = 61/119 (51%), Gaps = 7/119 (5%)

Query: 97  YKVGASCMQGWRITMEDAHSHILSLPDDPGTAFFAVYDGHGGSKIAQFAGKHLHKYIVK- 155
           +  G S   G R T EDA     +L ++     F V+DGHGG    +FA K L + +++ 
Sbjct: 1   FSAGVSDKGGDRKTNEDAVVIKPNL-NNEDGGLFGVFDGHGGHAAGEFASKLLVEELLEE 59

Query: 156 ---TREFKEGNITEALKKGFMDLDAAMLD--DDALKDELAGTTAICILIKDNILYCRNV 209
              T    E +I EAL+K F+  D  +L+   D   D  +GTTA+  LI+ N LY  NV
Sbjct: 60  LEETLTLSEEDIEEALRKAFLRADEEILEEAQDEPDDARSGTTAVVALIRGNKLYVANV 118

Length = 254
>gnl|CDD|214625 smart00332, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>gnl|CDD|215938 pfam00481, PP2C, Protein phosphatase 2C Back     alignment and domain information
>gnl|CDD|223704 COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|215603 PLN03145, PLN03145, Protein phosphatase 2c; Provisional Back     alignment and domain information
>gnl|CDD|240318 PTZ00224, PTZ00224, protein phosphatase 2C; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 212
KOG0697|consensus 379 99.94
PLN03145 365 Protein phosphatase 2c; Provisional 99.9
KOG0699|consensus 542 99.89
PTZ00224 381 protein phosphatase 2C; Provisional 99.88
PF00481 254 PP2C: Protein phosphatase 2C; InterPro: IPR001932 99.85
KOG0698|consensus 330 99.85
COG0631 262 PTC1 Serine/threonine protein phosphatase [Signal 99.78
smart00332 255 PP2Cc Serine/threonine phosphatases, family 2C, ca 99.71
cd00143 254 PP2Cc Serine/threonine phosphatases, family 2C, ca 99.71
PRK14559 645 putative protein serine/threonine phosphatase; Pro 99.69
KOG0700|consensus 390 99.68
KOG1323|consensus 493 99.32
PF13672212 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 99.21
smart00331193 PP2C_SIG Sigma factor PP2C-like phosphatases. 98.72
KOG1379|consensus 330 98.58
KOG0618|consensus 1081 98.2
TIGR02865 764 spore_II_E stage II sporulation protein E. Stage I 96.3
PF07228 193 SpoIIE: Stage II sporulation protein E (SpoIIE); I 96.13
>KOG0697|consensus Back     alignment and domain information 
Probab=99.94  E-value=1.3e-26  Score=196.04  Aligned_cols=137  Identities=34%  Similarity=0.650  Sum_probs=120.8

Q ss_pred             cCcccCCCCcCCCCCccCCCCeEEEEEccccCCCCCCcceeeecCCCC-CCCceEEEEEcCCCChHHHHHHHHHHHHHHH
Q psy6963          76 MGQTLTEPVTNKDSSSVQNPLYKVGASCMQGWRITMEDAHSHILSLPD-DPGTAFFAVYDGHGGSKIAQFAGKHLHKYIV  154 (212)
Q Consensus        76 m~~~l~~p~~~~~~~~~~~~~~~~g~~s~~G~R~~nED~~~~~~~~~~-~~~~~lfgVfDGHGG~~aA~~a~~~l~~~l~  154 (212)
                      ||..|.+|++.|.......+.++||+.||||||-.|||+|.+...+.+ -.++.||||||||.|+++|++|+++|..++.
T Consensus         1 MGaFLdKPkteKhn~~G~GNglryg~SSMQGWR~eMEDah~A~~~l~~~l~dWSfFAVfDGHAGs~va~~c~~hLlehi~   80 (379)
T KOG0697|consen    1 MGAFLDKPKTEKHNAEGEGNGLRYGVSSMQGWRVEMEDAHTAVAGLPSPLEDWSFFAVFDGHAGSQVANHCAEHLLEHII   80 (379)
T ss_pred             CCccccCcccccccccCcCCceeeeeccccchhhhhhhhhhhhhcCCCCccCceEEEEEcCccchHHHHHHHHHHHHHhh
Confidence            899999999999999999999999999999999999999998766643 3789999999999999999999999999998


Q ss_pred             hhccCC-------hhhHHHHHHHHHHHHHHHHhcccCC--CCCCCccceeeeeEECCEEEEEEcCCC
Q psy6963         155 KTREFK-------EGNITEALKKGFMDLDAAMLDDDAL--KDELAGTTAICILIKDNILYCRNVRGL  212 (212)
Q Consensus       155 ~~~~~~-------~~~i~~aL~~af~~~d~~l~~~~~~--~~~~sGtTa~v~li~~~~l~vANvGD~  212 (212)
                      ...++.       .+.++.-|+..|+++|+.++.....  ....+||||+++++.+.++|++||||.
T Consensus        81 sse~F~~~~k~gsv~~~~~GIrtGFL~iDE~mr~~~~~~~~~drsGsTAVcv~vsp~h~y~~NcGDS  147 (379)
T KOG0697|consen   81 SSEEFRGMTKNGSVENVEKGIRTGFLSIDEIMRTLSDISKGSDRSGSTAVCVFVSPTHIYIINCGDS  147 (379)
T ss_pred             hhHHHhhhccCCcHHHHHhhHhhcceeHHHHHhhhhhhhcccccCCceEEEEEecCceEEEEecCcc
Confidence            764443       2478899999999999999876432  234599999999999999999999995

>PLN03145 Protein phosphatase 2c; Provisional Back     alignment and domain information
>KOG0699|consensus Back     alignment and domain information
>PTZ00224 protein phosphatase 2C; Provisional Back     alignment and domain information
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>KOG0698|consensus Back     alignment and domain information
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>PRK14559 putative protein serine/threonine phosphatase; Provisional Back     alignment and domain information
>KOG0700|consensus Back     alignment and domain information
>KOG1323|consensus Back     alignment and domain information
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B Back     alignment and domain information
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases Back     alignment and domain information
>KOG1379|consensus Back     alignment and domain information
>KOG0618|consensus Back     alignment and domain information
>TIGR02865 spore_II_E stage II sporulation protein E Back     alignment and domain information
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query212
2i0o_A 304 Crystal Structure Of Anopheles Gambiae SerTHR PHOSP 2e-19
1a6q_A 382 Crystal Structure Of The Protein SerineTHREONINE PH 3e-16
3fxj_A 390 Crystal Structure Of Human Protein Phosphatase 1a ( 3e-16
2p8e_A 307 Crystal Structure Of The SerineTHREONINE PHOSPHATAS 2e-13
3kdj_B 316 Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Le 3e-04
3nmn_B 319 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 3e-04
4ds8_B 343 Complex Structure Of Abscisic Acid Receptor Pyl3-(+ 3e-04
3rt0_A 340 Crystal Structure Of Pyl10-Hab1 Complex In The Abse 3e-04
3ujg_B 350 Crystal Structure Of Snrk2.6 In Complex With Hab1 L 3e-04
3nmt_B 341 Crystal Structure Of Pyrabactin Bound Abscisic Acid 3e-04
3jrq_A 326 Crystal Structure Of (+)-aba-bound Pyl1 In Complex 4e-04
3qn1_B 337 Crystal Structure Of The Pyr1 Abscisic Acid Recepto 4e-04
3kb3_B 321 Crystal Structure Of Abscisic Acid-Bound Pyl2 In Co 4e-04
2iq1_A 274 Crystal Structure Of Human Ppm1k Length = 274 4e-04
3nmv_B 324 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 7e-04
4da1_A 389 Crystal Structure Of Branched-Chain Alpha-Ketoacid 7e-04
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE COMPLEXED With Zn2+ Length = 304 Back     alignment and structure 
Iteration: 1

 Score = 92.0 bits (227), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 43/99 (43%), Positives = 62/99 (62%), Gaps = 2/99 (2%)
Query: 75  AMGQTLTEPVTNKDSSSVQNPLYKVGASCMQGWRITMEDAHSHILSLPDDPGTAFFAVYD 134
           ++G  L+EP+T KDSS   N     G+S MQGWRI+ EDAH+ IL+  D    +FFAVYD
Sbjct: 1   SLGAYLSEPLTTKDSSDESNEFLASGSSSMQGWRISQEDAHNCILNFDDQ--CSFFAVYD 58
Query: 135 GHGGSKIAQFAGKHLHKYIVKTREFKEGNITEALKKGFM 173
           GHGG+++AQ+   HL  ++     +      +ALK+ F+
Sbjct: 59  GHGGAEVAQYCSLHLPTFLKTVEAYGRKEFEKALKEAFL 97
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE PHOSPHATASE 2C AT 2 A Resolution Length = 382 Back     alignment and structure
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a) Bound With Phosphate At 3 Mm Of Mn2+ Length = 390 Back     alignment and structure
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE Domain Of Human Ppm1b Length = 307 Back     alignment and structure
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Length = 316 Back     alignment and structure
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl1 In Complex With Type 2c Protein Phosphatase Abi1 Length = 319 Back     alignment and structure
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+ Length = 343 Back     alignment and structure
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of Abscisic Acid (Aba) Length = 340 Back     alignment and structure
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 350 Back     alignment and structure
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Hab1 Length = 341 Back     alignment and structure
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With Abi1 Length = 326 Back     alignment and structure
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In Complex With The Hab1 Type 2c Phosphatase Catalytic Domain Length = 337 Back     alignment and structure
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex With Hab1 Length = 321 Back     alignment and structure
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k Length = 274 Back     alignment and structure
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Abi2 Length = 324 Back     alignment and structure
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid Dehydrogenase Phosphatase With Mg (Ii) Ions At The Active Site Length = 389 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query212
2i0o_A 304 Ser/Thr phosphatase; beta sandwich, structural gen 2e-55
2p8e_A 307 PPM1B beta isoform variant 6; structural genomics, 2e-50
1a6q_A 382 Phosphatase 2C; catalytic mechanism, metalloenzyme 6e-50
2i44_A 324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 5e-47
2j4o_A 401 Mitogen-activated protein kinase kinase kinase 7-i 2e-38
2iq1_A 274 Protein phosphatase 2C kappa, PPM1K; structural ge 4e-38
3kdj_B 316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 9e-38
4da1_A 389 Protein phosphatase 1K, mitochondrial; metal-ION-a 6e-37
3qn1_B 337 Protein phosphatase 2C 16; start domain, BET V dom 6e-35
2isn_A 364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 2e-32
3d8k_A 377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 2e-27
2irm_A 358 Mitogen-activated protein kinase kinase kinase 7 i 9e-24
2pnq_A 467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 8e-14
2pnq_A 467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 3e-06
2j82_A 240 TPPHA, protein serine-threonine phosphatase; PP2C 9e-04
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Length = 304 Back     alignment and structure
 Score =  177 bits (450), Expect = 2e-55
 Identities = 53/151 (35%), Positives = 81/151 (53%), Gaps = 18/151 (11%)

Query: 75  AMGQTLTEPVTNKDSSSVQNPLYKVGASCMQGWRITMEDAHSHILSLPDDPGTAFFAVYD 134
           ++G  L+EP+T KDSS   N     G+S MQGWRI+ EDAH+ IL+  D    +FFAVYD
Sbjct: 1   SLGAYLSEPLTTKDSSDESNEFLASGSSSMQGWRISQEDAHNCILNFDDQ--CSFFAVYD 58

Query: 135 GHGGSKIAQFAGKHLHKYIVKTREFKEGNITEALKKGFMDLDAAMLDDDALKD------- 187
           GHGG+++AQ+   HL  ++     +      +ALK+ F+  DA +L +  +++       
Sbjct: 59  GHGGAEVAQYCSLHLPTFLKTVEAYGRKEFEKALKEAFLGFDATLLQEKVIEELKVLSGD 118

Query: 188 ---------ELAGTTAICILIKDNILYCRNV 209
                    + +G TA+  L+    LY  N 
Sbjct: 119 SAGSDAEPGKDSGCTAVVALLHGKDLYVANA 149
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Length = 307 Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Length = 382 Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Length = 324 Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Length = 401 Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Length = 274 Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Length = 316 Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Length = 389 Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3ujg_B 3nmt_B* 3rt0_A 3kb3_B* Length = 337 Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Length = 364 Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Length = 377 Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Length = 358 Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Length = 240 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query212
2i0o_A 304 Ser/Thr phosphatase; beta sandwich, structural gen 99.94
2p8e_A 307 PPM1B beta isoform variant 6; structural genomics, 99.93
1a6q_A 382 Phosphatase 2C; catalytic mechanism, metalloenzyme 99.92
3qn1_B 337 Protein phosphatase 2C 16; start domain, BET V dom 99.87
2isn_A 364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 99.86
3kdj_B 316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 99.86
2i44_A 324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 99.86
2irm_A 358 Mitogen-activated protein kinase kinase kinase 7 i 99.83
2j4o_A 401 Mitogen-activated protein kinase kinase kinase 7-i 99.83
2iq1_A 274 Protein phosphatase 2C kappa, PPM1K; structural ge 99.83
2pnq_A 467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 99.81
1txo_A 237 Putative bacterial enzyme; serine/threonine protei 99.81
2pk0_A 250 Serine/threonine protein phosphatase STP1; SI moti 99.8
4da1_A 389 Protein phosphatase 1K, mitochondrial; metal-ION-a 99.8
2j82_A 240 TPPHA, protein serine-threonine phosphatase; PP2C 99.78
3d8k_A 377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 99.78
2jfr_A 234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 99.73
3rnr_A 211 Stage II sporulation E family protein; structural 99.43
3t91_A 242 Stage II sporulation protein E; SPOIIE, phosphatas 98.26
3pu9_A 242 Protein serine/threonine phosphatase; PSI-biology, 98.0
3zt9_A193 Serine phosphatase; hydrolase, signal transduction 97.44
3f79_A 255 Probable two-component response regulator; adaptor 97.44
3ke6_A 399 Protein RV1364C/MT1410; anti-sigma factor, anti-si 90.7
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Back     alignment and structure
Probab=99.94  E-value=1.2e-26  Score=200.81  Aligned_cols=136  Identities=40%  Similarity=0.702  Sum_probs=117.8

Q ss_pred             ccCcccCCCCcCCCCCccCCCCeEEEEEccccCCCCCCcceeeecCCCCCCCceEEEEEcCCCChHHHHHHHHHHHHHHH
Q psy6963          75 AMGQTLTEPVTNKDSSSVQNPLYKVGASCMQGWRITMEDAHSHILSLPDDPGTAFFAVYDGHGGSKIAQFAGKHLHKYIV  154 (212)
Q Consensus        75 ~m~~~l~~p~~~~~~~~~~~~~~~~g~~s~~G~R~~nED~~~~~~~~~~~~~~~lfgVfDGHGG~~aA~~a~~~l~~~l~  154 (212)
                      .||++|++|.+.|.+.......+.||.++++|+|..|||++.+...+  +....||+|||||||+.+|+|++++++..|.
T Consensus         1 ~mg~~l~~p~~~~~~~~~~~~~~~~~~~s~~G~R~~nED~~~~~~~~--~~~~~l~~V~DGhGG~~~a~~as~~~~~~l~   78 (304)
T 2i0o_A            1 SLGAYLSEPLTTKDSSDESNEFLASGSSSMQGWRISQEDAHNCILNF--DDQCSFFAVYDGHGGAEVAQYCSLHLPTFLK   78 (304)
T ss_dssp             CCGGGTTCCCEEEEEEEEECSSEEEEEEEEEESSSCCCEEEEEEEEE--ETTEEEEEEEECSSCSHHHHHHHHHHHHHHH
T ss_pred             CcccccCCCcccccccccCCCceEEEEeecCCCCCCccCEEEEEecc--CCCeEEEEEEcCCCCHHHHHHHHHHHHHHHH
Confidence            49999999999999888888899999999999999999999886543  3467899999999999999999999999998


Q ss_pred             hhccCChhhHHHHHHHHHHHHHHHHhccc----------------CCCCCCCccceeeeeEECCEEEEEEcCCC
Q psy6963         155 KTREFKEGNITEALKKGFMDLDAAMLDDD----------------ALKDELAGTTAICILIKDNILYCRNVRGL  212 (212)
Q Consensus       155 ~~~~~~~~~i~~aL~~af~~~d~~l~~~~----------------~~~~~~sGtTa~v~li~~~~l~vANvGD~  212 (212)
                      +...+....+.++|+++|..+|+.|.+..                ......+|||+++++|.++++|||||||.
T Consensus        79 ~~~~~~~~~~~~~l~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDS  152 (304)
T 2i0o_A           79 TVEAYGRKEFEKALKEAFLGFDATLLQEKVIEELKVLSGDSAGSDAEPGKDSGCTAVVALLHGKDLYVANAGDS  152 (304)
T ss_dssp             HSHHHHTTCHHHHHHHHHHHHHHHTTSHHHHHHHHHHHCC-----CCTTTSCEEEEEEEEEETTEEEEEEESSC
T ss_pred             hhhhcccccHHHHHHHHHHHHHHHHHhhhhHHHHhhhccccccccccCCCCCCccEEEEEEECCEEEEEEccCc
Confidence            76544345788999999999999987532                12245699999999999999999999995
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B* Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Back     alignment and structure
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A* Back     alignment and structure
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus} Back     alignment and structure
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica} Back     alignment and structure
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A Back     alignment and structure
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 212
d1a6qa2 295 d.219.1.1 (A:2-296) Protein serine/threonine phosp 4e-32
d1txoa_ 235 d.219.1.1 (A:) putative serine/threonine phosphata 1e-10
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 295 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  116 bits (290), Expect = 4e-32
 Identities = 47/144 (32%), Positives = 74/144 (51%), Gaps = 10/144 (6%)

Query: 77  GQTLTEPVTNKDSSSVQNPLYKVGASCMQGWRITMEDAHSHILSLPD-DPGTAFFAVYDG 135
           G  L +P   K ++  Q    + G S MQGWR+ MEDAH+ ++ LP      +FFAVYDG
Sbjct: 1   GAFLDKPKMEKHNAQGQGNGLRYGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYDG 60

Query: 136 HGGSKIAQFAGKHLHKYIVKTREFKEGN-------ITEALKKGFMDLDAAMLDDDALKDE 188
           H GS++A++  +HL  +I   ++FK          +   ++ GF+++D  M      K  
Sbjct: 61  HAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHG 120

Query: 189 L--AGTTAICILIKDNILYCRNVR 210
              +G+TA+ +LI     Y  N  
Sbjct: 121 ADRSGSTAVGVLISPQHTYFINCG 144
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Length = 235 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query212
d1a6qa2 295 Protein serine/threonine phosphatase 2C, catalytic 99.95
d1txoa_ 235 putative serine/threonine phosphatase pstp/ppp {My 99.81
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=3.8e-28  Score=207.55  Aligned_cols=136  Identities=33%  Similarity=0.581  Sum_probs=116.8

Q ss_pred             CcccCCCCcCCCCCccCCCCeEEEEEccccCCCCCCcceeeecCCCCC-CCceEEEEEcCCCChHHHHHHHHHHHHHHHh
Q psy6963          77 GQTLTEPVTNKDSSSVQNPLYKVGASCMQGWRITMEDAHSHILSLPDD-PGTAFFAVYDGHGGSKIAQFAGKHLHKYIVK  155 (212)
Q Consensus        77 ~~~l~~p~~~~~~~~~~~~~~~~g~~s~~G~R~~nED~~~~~~~~~~~-~~~~lfgVfDGHGG~~aA~~a~~~l~~~l~~  155 (212)
                      |.+|++|.+.|.++......+.||+++++|+|++|||++.+...+... .+..||||||||||+.||+|++++|+..|.+
T Consensus         1 ~~~l~~p~~~k~~~~~~~~~~~~g~~s~~G~R~~~ED~~~~~~~~~~~~~~~~lf~V~DGhGG~~~s~~~~~~l~~~l~~   80 (295)
T d1a6qa2           1 GAFLDKPKMEKHNAQGQGNGLRYGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHITN   80 (295)
T ss_dssp             CCCCSSCEEEEEEEEEEETTEEEEEEEEEETSSSCCEEEEEEEEETTTEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHT
T ss_pred             CCCCCCCCcccCcccccCCceEEEEEeCccCCCcccCeeEEEcccCCCCCceEEEEEEeCCCChHHHHHHHHHHHHHHHH
Confidence            678999999999888888899999999999999999999988766432 5678999999999999999999999999976


Q ss_pred             hcc-------CChhhHHHHHHHHHHHHHHHHhccc--CCCCCCCccceeeeeEECCEEEEEEcCCC
Q psy6963         156 TRE-------FKEGNITEALKKGFMDLDAAMLDDD--ALKDELAGTTAICILIKDNILYCRNVRGL  212 (212)
Q Consensus       156 ~~~-------~~~~~i~~aL~~af~~~d~~l~~~~--~~~~~~sGtTa~v~li~~~~l~vANvGD~  212 (212)
                      ...       ...+.+.++|+++|.++++.+....  ......+||||++++|.++++|||||||.
T Consensus        81 ~~~~~~~~~~~~~~~~~~al~~a~~~~~~~~~~~~~~~~~~~~~GtTa~~~~i~~~~l~vanvGDS  146 (295)
T d1a6qa2          81 NQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDS  146 (295)
T ss_dssp             SHHHHCSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEECEEEEEECSSEEEEEEESSC
T ss_pred             hhhhccccccchHHHHHHHHHHHHHHHHHHHhhhhhhccCcCCCCCeEEEEEeeCCEEEEEecCCC
Confidence            532       1235789999999999999986542  23455689999999999999999999995
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure