Psyllid ID: psy6


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60------
MGSVPVEFFIVLLFQRQGCVQGEELPYMFGAPLVGGMGYFPKNYTKPEIQLSEMLMTYLSNFVRTG
ccccccEEEEEEccEEcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccc
ccccccEEEEEEEEccccccccccccEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHcc
MGSVPVEFFIVLLFQrqgcvqgeelpymfgaplvggmgyfpknytkpeiQLSEMLMTYLSNFVRTG
MGSVPVEFFIVLLFQRQGCVQGEELPYMFGAPLVGGMGYFPKNYTKPEIQLSEMLMTYLSNFVRTG
MGSVPVEFFIVLLFQRQGCVQGEELPYMFGAPLVGGMGYFPKNYTKPEIQLSEMLMTYLSNFVRTG
****PVEFFIVLLFQRQGCVQGEELPYMFGAPLVGGMGYFPKNYTKPEIQLSEMLMTYLSNFV***
**SVPVEFFIVLLFQRQGCVQGEELPYMFGAPLVGGMGYFPKNYTKPEIQLSEMLMTYLSNFVRTG
MGSVPVEFFIVLLFQRQGCVQGEELPYMFGAPLVGGMGYFPKNYTKPEIQLSEMLMTYLSNFVRTG
**SVPVEFFIVLLFQRQGCVQGEELPYMFGAPLVGGMGYFPKNYTKPEIQLSEMLMTYLSNFVRTG
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiii
oooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MGSVPVEFFIVLLFQRQGCVQGEELPYMFGAPLVGGMGYFPKNYTKPEIQLSEMLMTYLSNFVRTG
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query66 2.2.26 [Sep-21-2011]
Q8NFZ4 835 Neuroligin-2 OS=Homo sapi yes N/A 0.696 0.055 0.5 7e-09
Q62888 836 Neuroligin-2 OS=Rattus no yes N/A 0.696 0.055 0.5 7e-09
Q69ZK9 836 Neuroligin-2 OS=Mus muscu yes N/A 0.696 0.055 0.5 7e-09
Q9NZ94 848 Neuroligin-3 OS=Homo sapi no N/A 0.696 0.054 0.478 3e-08
Q62889 848 Neuroligin-3 OS=Rattus no no N/A 0.696 0.054 0.478 4e-08
Q8BYM5 825 Neuroligin-3 OS=Mus muscu no N/A 0.696 0.055 0.478 4e-08
Q8WMH2 202 Neuroligin-3 (Fragment) O no N/A 0.696 0.227 0.478 1e-07
Q62765 843 Neuroligin-1 OS=Rattus no no N/A 0.696 0.054 0.434 3e-07
Q99K10 843 Neuroligin-1 OS=Mus muscu no N/A 0.696 0.054 0.434 3e-07
Q8N2Q7 840 Neuroligin-1 OS=Homo sapi no N/A 0.696 0.054 0.434 3e-07
>sp|Q8NFZ4|NLGN2_HUMAN Neuroligin-2 OS=Homo sapiens GN=NLGN2 PE=1 SV=1 Back     alignment and function desciption
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 23/46 (50%), Positives = 34/46 (73%)

Query: 21  QGEELPYMFGAPLVGGMGYFPKNYTKPEIQLSEMLMTYLSNFVRTG 66
            G+ELPY+FG P+VG    FP N++K ++ LS ++MTY +NF +TG
Sbjct: 500 HGDELPYVFGVPMVGATDLFPCNFSKNDVMLSAVVMTYWTNFAKTG 545




Neuronal cell surface protein thought to be involved in cell-cell-interactions by forming intercellular junctions through binding to beta-neurexins. Seems to play role in formation or maintenance of synaptic junctions. In vitro, triggers the de novo formation of presynaptic structures.
Homo sapiens (taxid: 9606)
>sp|Q62888|NLGN2_RAT Neuroligin-2 OS=Rattus norvegicus GN=Nlgn2 PE=1 SV=1 Back     alignment and function description
>sp|Q69ZK9|NLGN2_MOUSE Neuroligin-2 OS=Mus musculus GN=Nlgn2 PE=1 SV=2 Back     alignment and function description
>sp|Q9NZ94|NLGN3_HUMAN Neuroligin-3 OS=Homo sapiens GN=NLGN3 PE=1 SV=2 Back     alignment and function description
>sp|Q62889|NLGN3_RAT Neuroligin-3 OS=Rattus norvegicus GN=Nlgn3 PE=1 SV=1 Back     alignment and function description
>sp|Q8BYM5|NLGN3_MOUSE Neuroligin-3 OS=Mus musculus GN=Nlgn3 PE=1 SV=2 Back     alignment and function description
>sp|Q8WMH2|NLGN3_MACMU Neuroligin-3 (Fragment) OS=Macaca mulatta GN=NLGN3 PE=2 SV=1 Back     alignment and function description
>sp|Q62765|NLGN1_RAT Neuroligin-1 OS=Rattus norvegicus GN=Nlgn1 PE=1 SV=1 Back     alignment and function description
>sp|Q99K10|NLGN1_MOUSE Neuroligin-1 OS=Mus musculus GN=Nlgn1 PE=1 SV=2 Back     alignment and function description
>sp|Q8N2Q7|NLGN1_HUMAN Neuroligin-1 OS=Homo sapiens GN=NLGN1 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query66
170041852 704 conserved hypothetical protein [Culex qu 0.787 0.073 0.692 3e-16
357608540 754 hypothetical protein KGM_04075 [Danaus p 0.787 0.068 0.673 4e-16
195108291 1189 GI23471 [Drosophila mojavensis] gi|19391 0.787 0.043 0.711 5e-16
195445538 899 GK11063 [Drosophila willistoni] gi|19416 0.787 0.057 0.711 7e-16
194899314 896 GG25051 [Drosophila erecta] gi|190650908 0.787 0.058 0.711 7e-16
350409771 807 PREDICTED: LOW QUALITY PROTEIN: neurolig 0.787 0.064 0.673 8e-16
195498709 911 GE25779 [Drosophila yakuba] gi|194182741 0.787 0.057 0.711 9e-16
85861136 872 AT29264p [Drosophila melanogaster] 0.787 0.059 0.711 9e-16
281361282 1159 CG34127, isoform B [Drosophila melanogas 0.787 0.044 0.711 9e-16
390179353 561 GA26210, partial [Drosophila pseudoobscu 0.787 0.092 0.692 9e-16
>gi|170041852|ref|XP_001848663.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167865422|gb|EDS28805.1| conserved hypothetical protein [Culex quinquefasciatus] Back     alignment and taxonomy information
 Score = 89.4 bits (220), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 36/52 (69%), Positives = 44/52 (84%)

Query: 15  QRQGCVQGEELPYMFGAPLVGGMGYFPKNYTKPEIQLSEMLMTYLSNFVRTG 66
           QRQGC+ GE+LPY+FGAPLVGG+ +F +NYTK EI LSE +M Y SNF+RTG
Sbjct: 306 QRQGCIHGEDLPYLFGAPLVGGLNHFTRNYTKSEIALSEAVMIYWSNFIRTG 357




Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357608540|gb|EHJ66049.1| hypothetical protein KGM_04075 [Danaus plexippus] Back     alignment and taxonomy information
>gi|195108291|ref|XP_001998726.1| GI23471 [Drosophila mojavensis] gi|193915320|gb|EDW14187.1| GI23471 [Drosophila mojavensis] Back     alignment and taxonomy information
>gi|195445538|ref|XP_002070370.1| GK11063 [Drosophila willistoni] gi|194166455|gb|EDW81356.1| GK11063 [Drosophila willistoni] Back     alignment and taxonomy information
>gi|194899314|ref|XP_001979205.1| GG25051 [Drosophila erecta] gi|190650908|gb|EDV48163.1| GG25051 [Drosophila erecta] Back     alignment and taxonomy information
>gi|350409771|ref|XP_003488839.1| PREDICTED: LOW QUALITY PROTEIN: neuroligin-4, Y-linked-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|195498709|ref|XP_002096640.1| GE25779 [Drosophila yakuba] gi|194182741|gb|EDW96352.1| GE25779 [Drosophila yakuba] Back     alignment and taxonomy information
>gi|85861136|gb|ABC86516.1| AT29264p [Drosophila melanogaster] Back     alignment and taxonomy information
>gi|281361282|ref|NP_001036685.2| CG34127, isoform B [Drosophila melanogaster] gi|442617880|ref|NP_731170.2| CG34127, isoform C [Drosophila melanogaster] gi|272476850|gb|AAF53999.3| CG34127, isoform B [Drosophila melanogaster] gi|440217166|gb|AAF54000.3| CG34127, isoform C [Drosophila melanogaster] Back     alignment and taxonomy information
>gi|390179353|ref|XP_002137969.2| GA26210, partial [Drosophila pseudoobscura pseudoobscura] gi|388859817|gb|EDY68527.2| GA26210, partial [Drosophila pseudoobscura pseudoobscura] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query66
FB|FBgn0083963 1159 CG34127 [Drosophila melanogast 0.787 0.044 0.711 2.3e-15
FB|FBgn0083975 1281 CG34139 [Drosophila melanogast 0.787 0.040 0.615 6.6e-12
UNIPROTKB|Q8WMH2 202 NLGN3 "Neuroligin-3" [Macaca m 0.681 0.222 0.488 5.9e-09
ZFIN|ZDB-GENE-090918-2 828 nlgn2a "neuroligin 2a" [Danio 0.681 0.054 0.488 1.2e-08
UNIPROTKB|F1N104 669 NLGN2 "Uncharacterized protein 0.681 0.067 0.511 2.5e-08
UNIPROTKB|I3LD92 804 NLGN2 "Uncharacterized protein 0.681 0.055 0.511 3.2e-08
UNIPROTKB|E2R9D0 835 NLGN2 "Uncharacterized protein 0.681 0.053 0.511 3.4e-08
UNIPROTKB|Q8NFZ4 835 NLGN2 "Neuroligin-2" [Homo sap 0.681 0.053 0.511 3.4e-08
MGI|MGI:2681835 836 Nlgn2 "neuroligin 2" [Mus musc 0.681 0.053 0.511 3.4e-08
RGD|621118 836 Nlgn2 "neuroligin 2" [Rattus n 0.681 0.053 0.511 3.4e-08
FB|FBgn0083963 CG34127 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 207 (77.9 bits), Expect = 2.3e-15, P = 2.3e-15
 Identities = 37/52 (71%), Positives = 44/52 (84%)

Query:    15 QRQGCVQGEELPYMFGAPLVGGMGYFPKNYTKPEIQLSEMLMTYLSNFVRTG 66
             QRQGC+ GE+LPY+FGAPLVGG  +F +NYTK EI LSE++M Y SNFVRTG
Sbjct:   685 QRQGCIHGEDLPYIFGAPLVGGFNHFTRNYTKTEISLSEVVMFYWSNFVRTG 736




GO:0004091 "carboxylesterase activity" evidence=IKR;NAS
GO:0042043 "neurexin family protein binding" evidence=ISS;IBA
GO:0006911 "phagocytosis, engulfment" evidence=IMP
GO:0022008 "neurogenesis" evidence=IMP
GO:0009986 "cell surface" evidence=IBA
GO:0045202 "synapse" evidence=IBA
GO:0005887 "integral to plasma membrane" evidence=IBA
GO:0007416 "synapse assembly" evidence=IBA
GO:0004872 "receptor activity" evidence=IBA
FB|FBgn0083975 CG34139 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|Q8WMH2 NLGN3 "Neuroligin-3" [Macaca mulatta (taxid:9544)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-090918-2 nlgn2a "neuroligin 2a" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1N104 NLGN2 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|I3LD92 NLGN2 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|E2R9D0 NLGN2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q8NFZ4 NLGN2 "Neuroligin-2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:2681835 Nlgn2 "neuroligin 2" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|621118 Nlgn2 "neuroligin 2" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query66
pfam00135510 pfam00135, COesterase, Carboxylesterase family 3e-07
cd00312493 cd00312, Esterase_lipase, Esterases and lipases (i 5e-05
>gnl|CDD|215741 pfam00135, COesterase, Carboxylesterase family Back     alignment and domain information
 Score = 44.6 bits (106), Expect = 3e-07
 Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 5/45 (11%)

Query: 22  GEELPYMFGAPLVGGMGYFPKNYTKPEIQLSEMLMTYLSNFVRTG 66
           G++LPY+FG PL          Y++ E  LS  +M Y +NF +TG
Sbjct: 430 GDDLPYVFGNPL-----MRKLLYSEEEEILSRRMMGYWTNFAKTG 469


Length = 510

>gnl|CDD|238191 cd00312, Esterase_lipase, Esterases and lipases (includes fungal lipases, cholinesterases, etc Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 66
KOG4389|consensus601 99.5
cd00312493 Esterase_lipase Esterases and lipases (includes fu 99.29
PF00135535 COesterase: Carboxylesterase family The prints ent 99.18
COG2272491 PnbA Carboxylesterase type B [Lipid metabolism] 98.93
KOG1516|consensus545 96.93
>KOG4389|consensus Back     alignment and domain information
Probab=99.50  E-value=1.3e-14  Score=98.02  Aligned_cols=53  Identities=40%  Similarity=0.600  Sum_probs=48.1

Q ss_pred             ccccCCCCCCCCccccHHHhcCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhcC
Q psy6              9 FIVLLFQRQGCVQGEELPYMFGAPLVGGMGYFPKNYTKPEIQLSEMLMTYLSNFVRTG   66 (66)
Q Consensus         9 ~~~~~p~~~Ga~H~~dl~yifg~~~~~~~~~~~~~~~~~d~~ls~~m~~~w~~Fak~G   66 (66)
                      ..+.+|.|.||.||.||-|+||.|+..     ....+++|+.+|++||++|+||||||
T Consensus       456 Sa~pWP~WmGVmHGYEIEyvFG~PL~~-----s~nYt~~E~~ls~rim~~WanFAktG  508 (601)
T KOG4389|consen  456 SANPWPKWMGVMHGYEIEYVFGIPLNY-----SRNYTKEEKILSRRIMRYWANFAKTG  508 (601)
T ss_pred             cCCCchhhhcCcccceEEEEecccccc-----cccccHHHHHHHHHHHHHHHHHhhcC
Confidence            456789999999999999999999874     36789999999999999999999998



>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc Back     alignment and domain information
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases Back     alignment and domain information
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism] Back     alignment and domain information
>KOG1516|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query66
3bl8_A580 Crystal Structure Of The Extracellular Domain Of Ne 6e-10
3vkf_A585 Crystal Structure Of Neurexin 1betaNEUROLIGIN 1 COM 3e-08
3biw_A574 Crystal Structure Of The Neuroligin-1NEUREXIN-1beta 4e-08
3b3q_A577 Crystal Structure Of A Synaptic Adhesion Complex Le 4e-08
3be8_A588 Crystal Structure Of The Synaptic Protein Neuroligi 7e-08
>pdb|3BL8|A Chain A, Crystal Structure Of The Extracellular Domain Of Neuroligin 2a From Mouse Length = 580 Back     alignment and structure

Iteration: 1

Score = 59.3 bits (142), Expect = 6e-10, Method: Composition-based stats. Identities = 23/46 (50%), Positives = 34/46 (73%) Query: 21 QGEELPYMFGAPLVGGMGYFPKNYTKPEIQLSEMLMTYLSNFVRTG 66 G+ELPY+FG P+VG FP N++K ++ LS ++MTY +NF +TG Sbjct: 461 HGDELPYVFGVPMVGATDLFPCNFSKNDVMLSAVVMTYWTNFAKTG 506
>pdb|3VKF|A Chain A, Crystal Structure Of Neurexin 1betaNEUROLIGIN 1 COMPLEX Length = 585 Back     alignment and structure
>pdb|3BIW|A Chain A, Crystal Structure Of The Neuroligin-1NEUREXIN-1beta Synaptic Adhesion Complex Length = 574 Back     alignment and structure
>pdb|3B3Q|A Chain A, Crystal Structure Of A Synaptic Adhesion Complex Length = 577 Back     alignment and structure
>pdb|3BE8|A Chain A, Crystal Structure Of The Synaptic Protein Neuroligin 4 Length = 588 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query66
3bix_A574 Neuroligin-1, neuroligin I; esterase domain, alpha 1e-16
1p0i_A529 Cholinesterase; serine hydrolase, butyrate, hydrol 7e-13
1ea5_A537 ACHE, acetylcholinesterase; hydrolase, serine hydr 1e-12
1dx4_A585 ACHE, acetylcholinesterase; hydrolase, serine este 1e-12
2bce_A 579 Cholesterol esterase; hydrolase, serine esterase, 2e-12
2ha2_A543 ACHE, acetylcholinesterase; hydrolase fold, serine 2e-12
2h7c_A542 Liver carboxylesterase 1; enzyme, cholesteryl este 4e-12
2fj0_A551 JuvenIle hormone esterase; manduca sexta, alpha-be 1e-09
1ukc_A522 ESTA, esterase; fungi, A/B hydrolase fold, acetylc 5e-09
2ogt_A498 Thermostable carboxylesterase EST50; alpha/beta hy 5e-09
1qe3_A489 PNB esterase, para-nitrobenzyl esterase; alpha-bet 1e-08
1thg_A544 Lipase; hydrolase(carboxylic esterase); HET: NAG N 2e-04
>3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A* Length = 574 Back     alignment and structure
 Score = 71.0 bits (174), Expect = 1e-16
 Identities = 20/52 (38%), Positives = 33/52 (63%)

Query: 15  QRQGCVQGEELPYMFGAPLVGGMGYFPKNYTKPEIQLSEMLMTYLSNFVRTG 66
                  G+E+PY+ G P++G    FP N++K ++ LS ++MTY +NF +TG
Sbjct: 449 AWADAAHGDEVPYVLGIPMIGPTELFPCNFSKNDVMLSAVVMTYWTNFAKTG 500


>1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ... Length = 529 Back     alignment and structure
>1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ... Length = 537 Back     alignment and structure
>1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A* Length = 585 Back     alignment and structure
>2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A Length = 579 Back     alignment and structure
>2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ... Length = 543 Back     alignment and structure
>2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A* Length = 542 Back     alignment and structure
>2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI} Length = 551 Back     alignment and structure
>1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17 Length = 522 Back     alignment and structure
>2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A Length = 498 Back     alignment and structure
>1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A Length = 489 Back     alignment and structure
>1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17 Length = 544 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query66
2h7c_A542 Liver carboxylesterase 1; enzyme, cholesteryl este 99.43
3bix_A574 Neuroligin-1, neuroligin I; esterase domain, alpha 99.42
2bce_A 579 Cholesterol esterase; hydrolase, serine esterase, 99.4
1p0i_A529 Cholinesterase; serine hydrolase, butyrate, hydrol 99.38
1ea5_A537 ACHE, acetylcholinesterase; hydrolase, serine hydr 99.37
2ha2_A543 ACHE, acetylcholinesterase; hydrolase fold, serine 99.36
1dx4_A585 ACHE, acetylcholinesterase; hydrolase, serine este 99.36
2fj0_A551 JuvenIle hormone esterase; manduca sexta, alpha-be 99.35
1ukc_A522 ESTA, esterase; fungi, A/B hydrolase fold, acetylc 99.21
1qe3_A489 PNB esterase, para-nitrobenzyl esterase; alpha-bet 99.21
2ogt_A498 Thermostable carboxylesterase EST50; alpha/beta hy 99.21
1thg_A544 Lipase; hydrolase(carboxylic esterase); HET: NAG N 98.95
1llf_A534 Lipase 3; candida cylindracea cholesterol esterase 98.84
>2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A* Back     alignment and structure
Probab=99.43  E-value=1.7e-13  Score=91.86  Aligned_cols=48  Identities=35%  Similarity=0.567  Sum_probs=41.2

Q ss_pred             CCCCCCCCccccHHHhcCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhcC
Q psy6             13 LFQRQGCVQGEELPYMFGAPLVGGMGYFPKNYTKPEIQLSEMLMTYLSNFVRTG   66 (66)
Q Consensus        13 ~p~~~Ga~H~~dl~yifg~~~~~~~~~~~~~~~~~d~~ls~~m~~~w~~Fak~G   66 (66)
                      .|.+.||+|++||+|+||++...      ...+++|++++++|+++|+||||+|
T Consensus       441 ~~~~~Ga~H~~el~yvFg~~~~~------~~~~~~~~~ls~~m~~~W~nFaktG  488 (542)
T 2h7c_A          441 KPKTVIGDHGDELFSVFGAPFLK------EGASEEEIRLSKMVMKFWANFARNG  488 (542)
T ss_dssp             SCTTCCSBTTTTHHHHTTGGGTS------SCCCHHHHHHHHHHHHHHHHHHHHS
T ss_pred             CCCCCCcccccchHHhhCCcccc------CCCCcHHHHHHHHHHHHHHHHHhhC
Confidence            45678999999999999986531      3468899999999999999999987



>3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A* Back     alignment and structure
>2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A Back     alignment and structure
>1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ... Back     alignment and structure
>1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ... Back     alignment and structure
>2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ... Back     alignment and structure
>1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A* Back     alignment and structure
>2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI} Back     alignment and structure
>1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17 Back     alignment and structure
>1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A Back     alignment and structure
>2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A Back     alignment and structure
>1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17 Back     alignment and structure
>1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 66
d1ea5a_532 c.69.1.1 (A:) Acetylcholinesterase {Pacific electr 5e-10
d2bcea_ 579 c.69.1.1 (A:) Bile-salt activated lipase (choleste 7e-10
d1ukca_517 c.69.1.17 (A:) Esterase EstA {Aspergillus niger [T 8e-10
d2ha2a1542 c.69.1.1 (A:1-542) Acetylcholinesterase {Mouse (Mu 1e-09
d1p0ia_526 c.69.1.1 (A:) Butyryl cholinesterase {Human (Homo 1e-09
d2h7ca1532 c.69.1.1 (A:1021-1553) Mammalian carboxylesterase 3e-09
d1dx4a_571 c.69.1.1 (A:) Acetylcholinesterase {Fruit fly (Dro 4e-09
d1qe3a_483 c.69.1.1 (A:) Thermophilic para-nitrobenzyl estera 7e-09
d1thga_544 c.69.1.17 (A:) Type-B carboxylesterase/lipase {Fun 4e-05
>d1ea5a_ c.69.1.1 (A:) Acetylcholinesterase {Pacific electric ray (Torpedo californica) [TaxId: 7787]} Length = 532 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Acetylcholinesterase-like
domain: Acetylcholinesterase
species: Pacific electric ray (Torpedo californica) [TaxId: 7787]
 Score = 50.9 bits (120), Expect = 5e-10
 Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 5/49 (10%)

Query: 18  GCVQGEELPYMFGAPLVGGMGYFPKNYTKPEIQLSEMLMTYLSNFVRTG 66
           G + G E+ ++FG PLV  +     NYT  E  LS  +M Y + F +TG
Sbjct: 434 GVIHGYEIEFVFGLPLVKEL-----NYTAEEEALSRRIMHYWATFAKTG 477


>d2bcea_ c.69.1.1 (A:) Bile-salt activated lipase (cholesterol esterase) {Cow (Bos taurus) [TaxId: 9913]} Length = 579 Back     information, alignment and structure
>d1ukca_ c.69.1.17 (A:) Esterase EstA {Aspergillus niger [TaxId: 5061]} Length = 517 Back     information, alignment and structure
>d2ha2a1 c.69.1.1 (A:1-542) Acetylcholinesterase {Mouse (Mus musculus) [TaxId: 10090]} Length = 542 Back     information, alignment and structure
>d1p0ia_ c.69.1.1 (A:) Butyryl cholinesterase {Human (Homo sapiens) [TaxId: 9606]} Length = 526 Back     information, alignment and structure
>d2h7ca1 c.69.1.1 (A:1021-1553) Mammalian carboxylesterase (liver carboxylesterase I) {Human (Homo sapiens) [TaxId: 9606]} Length = 532 Back     information, alignment and structure
>d1dx4a_ c.69.1.1 (A:) Acetylcholinesterase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 571 Back     information, alignment and structure
>d1qe3a_ c.69.1.1 (A:) Thermophilic para-nitrobenzyl esterase (PNB esterase) {Bacillus subtilis [TaxId: 1423]} Length = 483 Back     information, alignment and structure
>d1thga_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]} Length = 544 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query66
d2bcea_ 579 Bile-salt activated lipase (cholesterol esterase) 99.51
d2h7ca1532 Mammalian carboxylesterase (liver carboxylesterase 99.5
d1p0ia_526 Butyryl cholinesterase {Human (Homo sapiens) [TaxI 99.47
d1ea5a_532 Acetylcholinesterase {Pacific electric ray (Torped 99.45
d1qe3a_483 Thermophilic para-nitrobenzyl esterase (PNB estera 99.45
d1dx4a_571 Acetylcholinesterase {Fruit fly (Drosophila melano 99.43
d2ha2a1542 Acetylcholinesterase {Mouse (Mus musculus) [TaxId: 99.42
d1ukca_517 Esterase EstA {Aspergillus niger [TaxId: 5061]} 99.37
d1thga_544 Type-B carboxylesterase/lipase {Fungus (Geotrichum 99.11
d1llfa_534 Type-B carboxylesterase/lipase {Candida cylindrace 98.83
>d2bcea_ c.69.1.1 (A:) Bile-salt activated lipase (cholesterol esterase) {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Acetylcholinesterase-like
domain: Bile-salt activated lipase (cholesterol esterase)
species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.51  E-value=2.3e-15  Score=99.01  Aligned_cols=49  Identities=31%  Similarity=0.669  Sum_probs=42.6

Q ss_pred             CCCCCCCCccccHHHhcCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhcC
Q psy6             13 LFQRQGCVQGEELPYMFGAPLVGGMGYFPKNYTKPEIQLSEMLMTYLSNFVRTG   66 (66)
Q Consensus        13 ~p~~~Ga~H~~dl~yifg~~~~~~~~~~~~~~~~~d~~ls~~m~~~w~~Fak~G   66 (66)
                      .|.+.||+|++||+|+||++...     ....+++|++|+++|+++|+||||+|
T Consensus       427 ~~~~~Ga~H~~Dl~yvFg~p~~~-----~~~~t~~d~~ls~~m~~~WtnFaktG  475 (579)
T d2bcea_         427 YPKWMGADHADDLQYVFGKPFAT-----PLGYRAQDRTVSKAMIAYWTNFARTG  475 (579)
T ss_dssp             SCTTCCCBTTTTHHHHTTHHHHS-----GGGCCHHHHHHHHHHHHHHHHHHHHS
T ss_pred             CCCCCCccchhhHHHHcCCcccC-----CCCCCHHHHHHHHHHHHHHHHHhCcC
Confidence            56788999999999999987543     24568999999999999999999997



>d2h7ca1 c.69.1.1 (A:1021-1553) Mammalian carboxylesterase (liver carboxylesterase I) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1p0ia_ c.69.1.1 (A:) Butyryl cholinesterase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ea5a_ c.69.1.1 (A:) Acetylcholinesterase {Pacific electric ray (Torpedo californica) [TaxId: 7787]} Back     information, alignment and structure
>d1qe3a_ c.69.1.1 (A:) Thermophilic para-nitrobenzyl esterase (PNB esterase) {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1dx4a_ c.69.1.1 (A:) Acetylcholinesterase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d2ha2a1 c.69.1.1 (A:1-542) Acetylcholinesterase {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1ukca_ c.69.1.17 (A:) Esterase EstA {Aspergillus niger [TaxId: 5061]} Back     information, alignment and structure
>d1thga_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]} Back     information, alignment and structure
>d1llfa_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Candida cylindracea, cholesterol esterase [TaxId: 44322]} Back     information, alignment and structure