Psyllid ID: psy701
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 158 | ||||||
| 110755095 | 146 | PREDICTED: protein mago nashi [Apis mell | 0.905 | 0.979 | 0.916 | 1e-74 | |
| 156544015 | 146 | PREDICTED: protein mago nashi homolog 2- | 0.905 | 0.979 | 0.916 | 2e-74 | |
| 332028345 | 146 | Protein mago nashi [Acromyrmex echinatio | 0.905 | 0.979 | 0.909 | 3e-74 | |
| 357608362 | 146 | mago nashi [Danaus plexippus] | 0.917 | 0.993 | 0.910 | 3e-74 | |
| 157126173 | 149 | mago nashi, putative [Aedes aegypti] gi| | 0.943 | 1.0 | 0.879 | 4e-74 | |
| 213493456 | 147 | mago-nashi [Penaeus monodon] | 0.924 | 0.993 | 0.897 | 4e-74 | |
| 170033403 | 149 | mago nashi [Culex quinquefasciatus] gi|1 | 0.943 | 1.0 | 0.872 | 5e-74 | |
| 322785857 | 146 | hypothetical protein SINV_09898 [Solenop | 0.905 | 0.979 | 0.909 | 8e-74 | |
| 170285571 | 146 | putative protein mago nashi [Cotesia con | 0.905 | 0.979 | 0.902 | 1e-73 | |
| 242012656 | 151 | protein mago nashi, putative [Pediculus | 0.949 | 0.993 | 0.866 | 1e-73 |
| >gi|110755095|ref|XP_001120074.1| PREDICTED: protein mago nashi [Apis mellifera] gi|340711982|ref|XP_003394544.1| PREDICTED: protein mago nashi-like [Bombus terrestris] gi|350402504|ref|XP_003486509.1| PREDICTED: protein mago nashi-like [Bombus impatiens] gi|380030201|ref|XP_003698742.1| PREDICTED: protein mago nashi-like [Apis florea] gi|383861312|ref|XP_003706130.1| PREDICTED: protein mago nashi-like [Megachile rotundata] gi|307189971|gb|EFN74207.1| Protein mago nashi [Camponotus floridanus] gi|307204538|gb|EFN83218.1| Protein mago nashi [Harpegnathos saltator] | Back alignment and taxonomy information |
|---|
Score = 283 bits (725), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 131/143 (91%), Positives = 140/143 (97%)
Query: 16 DFYIRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEAYVHKCVMDELKRI 75
DFYIRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEAYVH+CVM+ELKRI
Sbjct: 4 DFYIRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEAYVHQCVMEELKRI 63
Query: 76 INESEVMHEDDSLWPQPDRIGRQELEIVIGDEHISFTTSKTGSLVDVNHSKDPDGLRCFY 135
I +SE+M EDDSLWPQPDR+GRQELEIVIGDEHISFTTSKTGSL+DVN S+DP+GLRCFY
Sbjct: 64 IQDSEIMQEDDSLWPQPDRVGRQELEIVIGDEHISFTTSKTGSLLDVNQSRDPEGLRCFY 123
Query: 136 YLVQDLKCLVFSLIGLHYKIKPI 158
YLVQDLKCLVFSLIGLH+KIKPI
Sbjct: 124 YLVQDLKCLVFSLIGLHFKIKPI 146
|
Source: Apis mellifera Species: Apis mellifera Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|156544015|ref|XP_001608006.1| PREDICTED: protein mago nashi homolog 2-like [Nasonia vitripennis] | Back alignment and taxonomy information |
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| >gi|332028345|gb|EGI68392.1| Protein mago nashi [Acromyrmex echinatior] | Back alignment and taxonomy information |
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| >gi|357608362|gb|EHJ65953.1| mago nashi [Danaus plexippus] | Back alignment and taxonomy information |
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| >gi|157126173|ref|XP_001660832.1| mago nashi, putative [Aedes aegypti] gi|157129592|ref|XP_001655409.1| mago nashi, putative [Aedes aegypti] gi|108872119|gb|EAT36344.1| AAEL011544-PA [Aedes aegypti] gi|108873342|gb|EAT37567.1| AAEL010453-PA [Aedes aegypti] | Back alignment and taxonomy information |
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| >gi|213493456|gb|ACJ47903.1| mago-nashi [Penaeus monodon] | Back alignment and taxonomy information |
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| >gi|170033403|ref|XP_001844567.1| mago nashi [Culex quinquefasciatus] gi|167874305|gb|EDS37688.1| mago nashi [Culex quinquefasciatus] | Back alignment and taxonomy information |
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| >gi|322785857|gb|EFZ12476.1| hypothetical protein SINV_09898 [Solenopsis invicta] | Back alignment and taxonomy information |
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| >gi|170285571|emb|CAM34505.1| putative protein mago nashi [Cotesia congregata] | Back alignment and taxonomy information |
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| >gi|242012656|ref|XP_002427045.1| protein mago nashi, putative [Pediculus humanus corporis] gi|212511293|gb|EEB14307.1| protein mago nashi, putative [Pediculus humanus corporis] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 158 | ||||||
| FB|FBgn0002736 | 147 | mago "mago nashi" [Drosophila | 0.911 | 0.979 | 0.881 | 1.3e-68 | |
| MGI|MGI:1913691 | 146 | Magohb "mago-nashi homolog B ( | 0.917 | 0.993 | 0.868 | 2.7e-68 | |
| UNIPROTKB|F1SQ44 | 148 | LOC100518306 "Uncharacterized | 0.936 | 1.0 | 0.859 | 9.2e-68 | |
| UNIPROTKB|F1NDG4 | 147 | MAGOH "Protein mago nashi homo | 0.905 | 0.972 | 0.874 | 1.2e-67 | |
| UNIPROTKB|P50594 | 146 | MAGOH "Protein mago nashi homo | 0.905 | 0.979 | 0.874 | 1.2e-67 | |
| UNIPROTKB|Q0VC92 | 148 | MAGOHB "Protein mago nashi hom | 0.905 | 0.966 | 0.874 | 1.2e-67 | |
| UNIPROTKB|Q3ZBV3 | 146 | MAGOH "Protein mago nashi homo | 0.905 | 0.979 | 0.874 | 1.2e-67 | |
| UNIPROTKB|P61326 | 146 | MAGOH "Protein mago nashi homo | 0.905 | 0.979 | 0.874 | 1.2e-67 | |
| UNIPROTKB|Q96A72 | 148 | MAGOHB "Protein mago nashi hom | 0.905 | 0.966 | 0.874 | 1.2e-67 | |
| UNIPROTKB|F1S766 | 146 | MAGOH "Uncharacterized protein | 0.905 | 0.979 | 0.874 | 1.2e-67 |
| FB|FBgn0002736 mago "mago nashi" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 696 (250.1 bits), Expect = 1.3e-68, P = 1.3e-68
Identities = 127/144 (88%), Positives = 137/144 (95%)
Query: 15 QDFYIRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEAYVHKCVMDELKR 74
+DFY+RYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEA+VH+ VM+ELKR
Sbjct: 4 EDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEAFVHQSVMEELKR 63
Query: 75 IINESEVMHEDDSLWPQPDRIGRQELEIVIGDEHISFTTSKTGSLVDVNHSKDPDGLRCF 134
II +SE+M EDD WP PDR+GRQELEIVIGDEHISFTTSKTGSLVDVN SKDP+GLRCF
Sbjct: 64 IIIDSEIMQEDDLPWPPPDRVGRQELEIVIGDEHISFTTSKTGSLVDVNRSKDPEGLRCF 123
Query: 135 YYLVQDLKCLVFSLIGLHYKIKPI 158
YYLVQDLKCLVFSLIGLH+KIKPI
Sbjct: 124 YYLVQDLKCLVFSLIGLHFKIKPI 147
|
|
| MGI|MGI:1913691 Magohb "mago-nashi homolog B (Drosophila)" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1SQ44 LOC100518306 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1NDG4 MAGOH "Protein mago nashi homolog" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| UNIPROTKB|P50594 MAGOH "Protein mago nashi homolog" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q0VC92 MAGOHB "Protein mago nashi homolog 2" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q3ZBV3 MAGOH "Protein mago nashi homolog" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|P61326 MAGOH "Protein mago nashi homolog" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q96A72 MAGOHB "Protein mago nashi homolog 2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1S766 MAGOH "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 158 | |||
| cd11295 | 143 | cd11295, Mago_nashi, Mago nashi proteins, integral | 1e-109 | |
| pfam02792 | 143 | pfam02792, Mago_nashi, Mago nashi protein | 1e-88 |
| >gnl|CDD|199917 cd11295, Mago_nashi, Mago nashi proteins, integral members of the exon junction complex | Back alignment and domain information |
|---|
Score = 306 bits (786), Expect = e-109
Identities = 121/143 (84%), Positives = 133/143 (93%)
Query: 16 DFYIRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEAYVHKCVMDELKRI 75
DFY+RYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEAYV V++ELKRI
Sbjct: 1 DFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEAYVSPAVLEELKRI 60
Query: 76 INESEVMHEDDSLWPQPDRIGRQELEIVIGDEHISFTTSKTGSLVDVNHSKDPDGLRCFY 135
I +SE++ EDD+ WP+PDR+GRQELEIV+GDEHISFTTSK GSLVDV SKDP+GLR FY
Sbjct: 61 IEDSEILKEDDAKWPEPDRVGRQELEIVMGDEHISFTTSKIGSLVDVQQSKDPEGLRVFY 120
Query: 136 YLVQDLKCLVFSLIGLHYKIKPI 158
YLVQDLKCLVFSLIGLH+KIKPI
Sbjct: 121 YLVQDLKCLVFSLIGLHFKIKPI 143
|
Members of this family, which was originally identified in Drosophila and called mago nashi, are integral members of the exon junction complex (EJC). The EJC is a multiprotein complex that is deposited on spliced mRNAs after intron removal at a conserved position upstream of the exon-exon junction, and transported to the cytoplasm where it has been shown to influence translation, surveillance, and localization of the spliced mRNA. It consists of four core proteins (eIF4AIII, Barentsz [Btz], Mago, and Y14), mRNA, and ATP and is supposed to be a binding platform for more peripherally and transiently associated factors along mRNA travel. Mago and Y14 form a stable heterodimer that stabilizes the complex by inhibiting eIF4AIII's ATPase activity. In humans, but not Drosophila, EJC is involved in nonsense-mediated mRNA decay (NMD) via binding to Upf3b, a central NMD effector. EJC is stripped off the mRNA during the first round of translation and then the complex components are transported back into the nucleus and recycled. The Mago-Y14 heterodimer has been shown to interact with the cytoplasmic protein PYM, an EJC disassembly factor, and specifically binds to the karyopherin nuclear receptor importin 13. Length = 143 |
| >gnl|CDD|111665 pfam02792, Mago_nashi, Mago nashi protein | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 158 | |||
| PF02792 | 143 | Mago_nashi: Mago nashi protein; InterPro: IPR00402 | 100.0 | |
| KOG3392|consensus | 147 | 100.0 |
| >PF02792 Mago_nashi: Mago nashi protein; InterPro: IPR004023 This family was originally identified in drosophila and called mago nashi, it is a strict maternal effect, grandchildless-like, gene [] | Back alignment and domain information |
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Probab=100.00 E-value=2.4e-101 Score=607.25 Aligned_cols=143 Identities=83% Similarity=1.390 Sum_probs=132.9
Q ss_pred ceEEEEecccCCcccceeEEEEEcCCCceeeecCCCCCCCceEEEEEEeeHHHHHHHHHHhhhcccccccCCCCCCCCCC
Q psy701 16 DFYIRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEAYVHKCVMDELKRIINESEVMHEDDSLWPQPDRI 95 (158)
Q Consensus 16 ~FYlRYY~GH~GkfGHEFLEfEfr~dG~lRYaNNSnYKnd~~IrKE~~vs~~v~~E~kRII~~SeI~kEdD~~WP~pd~~ 95 (158)
+||||||+||+||||||||||||||||+||||||||||||+||||||+||++||+|+||||.+||||+|||++||+||++
T Consensus 1 ~fYlRYy~gH~GkfGhEfLEfEfr~dG~lRYaNnSnYknd~~IrKe~~vs~~vl~E~krII~~SeI~kEdD~~WP~pd~~ 80 (143)
T PF02792_consen 1 DFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDSMIRKEVYVSPAVLEELKRIIEDSEIMKEDDSKWPEPDRV 80 (143)
T ss_dssp -EEEEEEEEEEETTEEEEEEEEEETTSEEEEEEEESCCCSEEEEEEEEE-HHHHHHHHHHHHHHTGGG--STTS--SBTT
T ss_pred CeeEEEEeccCccccceEEEEEeccCCeEEEcccCCCCCcceeeeeeEecHHHHHHHHHHHHHhhccccccccCCCCCCc
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeEEEEECCeEEEEEeccccceeeccCCCCCcchhhhHHHHHHHHHHHHHHhhhceeeccC
Q psy701 96 GRQELEIVIGDEHISFTTSKTGSLVDVNHSKDPDGLRCFYYLVQDLKCLVFSLIGLHYKIKPI 158 (158)
Q Consensus 96 GrQELEI~~g~~HisF~tsKiGSl~dvq~S~DPeGLr~FyYLvqDLKclvfsLi~lHFkikpi 158 (158)
|||||||+|||+||||+|||||||+|||+|+||||||+||||||||||||||||+||||||||
T Consensus 81 GrQELEI~lg~~HisF~tsKigsl~dv~~S~DPeGLr~FyYLvqDLKclvfsLi~lHFkikpi 143 (143)
T PF02792_consen 81 GRQELEIVLGNEHISFTTSKIGSLSDVQNSKDPEGLRVFYYLVQDLKCLVFSLISLHFKIKPI 143 (143)
T ss_dssp BEEEEEEEETTEEEEEEEC---SHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHTSSS-
T ss_pred cceeEEEEECCEEEEEEecccccceeeccCCCccHHHHHHHHHHHHHHHHHHHHHheeeeccC
Confidence 999999999999999999999999999999999999999999999999999999999999998
|
The human homologue has been shown to interact with an RNA binding protein, ribonucleoprotein rbm8 (Q9Y5S9 from SWISSPROT) []. An RNAi knockout of the Caenorhabditis elegans homologue causes masculinization of the germ line (Mog phenotype) hermaphrodites, suggesting it is involved in hermaphrodite germ-line sex determination [] but the protein is also found in hermaphrodites and other organisms without a sexual differentiation.; GO: 0005634 nucleus; PDB: 2XB2_Y 2J0S_C 3EX7_A 2J0Q_F 1P27_C 2HYI_A 2X1G_B 1HL6_B 1RK8_B 1OO0_A .... |
| >KOG3392|consensus | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 158 | ||||
| 1oo0_A | 147 | Crystal Structure Of The Drosophila Mago Nashi-Y14 | 1e-73 | ||
| 1hl6_B | 149 | A Novel Mode Of Rbd-Protein Recognition In The Y14- | 1e-73 | ||
| 2hyi_A | 146 | Structure Of The Human Exon Junction Complex With A | 8e-73 | ||
| 1p27_A | 144 | Crystal Structure Of The Human Y14MAGOH COMPLEX Len | 3e-72 |
| >pdb|1OO0|A Chain A, Crystal Structure Of The Drosophila Mago Nashi-Y14 Complex Length = 147 | Back alignment and structure |
|
| >pdb|1HL6|B Chain B, A Novel Mode Of Rbd-Protein Recognition In The Y14-Mago Complex Length = 149 | Back alignment and structure |
| >pdb|2HYI|A Chain A, Structure Of The Human Exon Junction Complex With A Trapped Dead-Box Helicase Bound To Rna Length = 146 | Back alignment and structure |
| >pdb|1P27|A Chain A, Crystal Structure Of The Human Y14MAGOH COMPLEX Length = 144 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 158 | |||
| 1oo0_A | 147 | MAGO nashi protein; RNA recognition motif, splicin | 4e-84 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-04 |
| >1oo0_A MAGO nashi protein; RNA recognition motif, splicing, protein complex, EXON junct complex, signaling protein; 1.85A {Drosophila melanogaster} SCOP: d.232.1.1 PDB: 1rk8_B 2x1g_B 1hl6_B 2j0s_C* 2j0q_C* 2hyi_A* 2xb2_C* 3ex7_A* 1p27_A Length = 147 | Back alignment and structure |
|---|
Score = 243 bits (620), Expect = 4e-84
Identities = 127/144 (88%), Positives = 137/144 (95%)
Query: 15 QDFYIRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEAYVHKCVMDELKR 74
+DFY+RYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEA+VH+ VM+ELKR
Sbjct: 4 EDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEAFVHQSVMEELKR 63
Query: 75 IINESEVMHEDDSLWPQPDRIGRQELEIVIGDEHISFTTSKTGSLVDVNHSKDPDGLRCF 134
II +SE+M EDD WP PDR+GRQELEIVIGDEHISFTTSKTGSLVDVN SKDP+GLRCF
Sbjct: 64 IIIDSEIMQEDDLPWPPPDRVGRQELEIVIGDEHISFTTSKTGSLVDVNRSKDPEGLRCF 123
Query: 135 YYLVQDLKCLVFSLIGLHYKIKPI 158
YYLVQDLKCLVFSLIGLH+KIKPI
Sbjct: 124 YYLVQDLKCLVFSLIGLHFKIKPI 147
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 158 | |||
| 1oo0_A | 147 | MAGO nashi protein; RNA recognition motif, splicin | 100.0 |
| >1oo0_A MAGO nashi protein; RNA recognition motif, splicing, protein complex, EXON junct complex, signaling protein; 1.85A {Drosophila melanogaster} SCOP: d.232.1.1 PDB: 1rk8_B 2x1g_B 1hl6_B 2j0s_C* 2j0q_C* 2hyi_A* 2xb2_C* 3ex7_A* 1p27_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-101 Score=609.34 Aligned_cols=145 Identities=88% Similarity=1.445 Sum_probs=143.3
Q ss_pred CCceEEEEecccCCcccceeEEEEEcCCCceeeecCCCCCCCceEEEEEEeeHHHHHHHHHHhhhcccccccCCCCCCCC
Q psy701 14 GQDFYIRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEAYVHKCVMDELKRIINESEVMHEDDSLWPQPD 93 (158)
Q Consensus 14 ~~~FYlRYY~GH~GkfGHEFLEfEfr~dG~lRYaNNSnYKnd~~IrKE~~vs~~v~~E~kRII~~SeI~kEdD~~WP~pd 93 (158)
+++||||||+||+||||||||||||||||+||||||||||||+|||||||||++||+|+||||.+|||++|||++||+||
T Consensus 3 ~~~fYlRYY~GH~GkfGhEfLEfEfr~dG~lrYaNnSnYknd~~IrKe~~vs~~v~~E~krII~~SeI~kEdD~~WP~pd 82 (147)
T 1oo0_A 3 TEDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEAFVHQSVMEELKRIIIDSEIMQEDDLPWPPPD 82 (147)
T ss_dssp -CCEEEEEEEEEEETTEEEEEEEEECTTSEEEEEEECCTTSSCCEEEEEEECHHHHHHHHHHHHHHTGGGCCCTTSCCCC
T ss_pred CCcEEEEEEecccCcccceEEEEEecCCCeEEEeccCCCcCCeeEEEEEEecHHHHHHHHHHHHHhcccccccccCCCCC
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceeEEEEECCeEEEEEeccccceeeccCCCCCcchhhhHHHHHHHHHHHHHHhhhceeeccC
Q psy701 94 RIGRQELEIVIGDEHISFTTSKTGSLVDVNHSKDPDGLRCFYYLVQDLKCLVFSLIGLHYKIKPI 158 (158)
Q Consensus 94 ~~GrQELEI~~g~~HisF~tsKiGSl~dvq~S~DPeGLr~FyYLvqDLKclvfsLi~lHFkikpi 158 (158)
++|||||||+|||+||||+|||||||+|||+|+||||||+||||||||||||||||+||||||||
T Consensus 83 ~~GrQELEI~~g~~HisF~tskigSl~dv~~S~DPeGLr~FyYLvqDLKclvfsLi~lHFkikpi 147 (147)
T 1oo0_A 83 RVGRQELEIVIGDEHISFTTSKTGSLVDVNRSKDPEGLRCFYYLVQDLKCLVFSLIGLHFKIKPI 147 (147)
T ss_dssp SSEEEEEEEEETTEEEEEEECCCCCHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCC
T ss_pred CcCceeEEEEECCEEEEEEecCcccHHHhccCCCccHHHHHHHHHHHHHHHHHHHHHhheeeccC
Confidence 99999999999999999999999999999999999999999999999999999999999999997
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 158 | ||||
| d1rk8b_ | 141 | d.232.1.1 (B:) Mago nashi protein {Fruit fly (Dros | 1e-102 |
| >d1rk8b_ d.232.1.1 (B:) Mago nashi protein {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 141 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Mago nashi protein superfamily: Mago nashi protein family: Mago nashi protein domain: Mago nashi protein species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Score = 288 bits (738), Expect = e-102
Identities = 124/141 (87%), Positives = 134/141 (95%)
Query: 15 QDFYIRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEAYVHKCVMDELKR 74
+DFY+RYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEA+VH+ VM+ELKR
Sbjct: 1 EDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEAFVHQSVMEELKR 60
Query: 75 IINESEVMHEDDSLWPQPDRIGRQELEIVIGDEHISFTTSKTGSLVDVNHSKDPDGLRCF 134
II +SE+M EDD WP PDR+GRQELEIVIGDEHISFTTSKTGSLVDVN SKDP+GLRCF
Sbjct: 61 IIIDSEIMQEDDLPWPPPDRVGRQELEIVIGDEHISFTTSKTGSLVDVNRSKDPEGLRCF 120
Query: 135 YYLVQDLKCLVFSLIGLHYKI 155
YYLVQDLKCLVFSLIGLH+KI
Sbjct: 121 YYLVQDLKCLVFSLIGLHFKI 141
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 158 | |||
| d1rk8b_ | 141 | Mago nashi protein {Fruit fly (Drosophila melanoga | 100.0 |
| >d1rk8b_ d.232.1.1 (B:) Mago nashi protein {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Mago nashi protein superfamily: Mago nashi protein family: Mago nashi protein domain: Mago nashi protein species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=100.00 E-value=1.3e-99 Score=592.63 Aligned_cols=141 Identities=88% Similarity=1.454 Sum_probs=126.1
Q ss_pred CceEEEEecccCCcccceeEEEEEcCCCceeeecCCCCCCCceEEEEEEeeHHHHHHHHHHhhhcccccccCCCCCCCCC
Q psy701 15 QDFYIRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEAYVHKCVMDELKRIINESEVMHEDDSLWPQPDR 94 (158)
Q Consensus 15 ~~FYlRYY~GH~GkfGHEFLEfEfr~dG~lRYaNNSnYKnd~~IrKE~~vs~~v~~E~kRII~~SeI~kEdD~~WP~pd~ 94 (158)
++|||||||||+||||||||||||||||+||||||||||||+||||||+||++||+|+||||.+||||+|||++||+||+
T Consensus 1 ~~FYlRYYvGH~GkfGhEfLEfEfr~dG~lrYaNnSnYknd~~IrKe~~vs~~v~~EikrII~~SeI~kedD~~WP~pdr 80 (141)
T d1rk8b_ 1 EDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEAFVHQSVMEELKRIIIDSEIMQEDDLPWPPPDR 80 (141)
T ss_dssp CCEEEEEEE------CCCCEEEEECTTCEEEEEC--------CCEEEEEECHHHHHHHHHHHHHHTGGGCCCTTSCCCCS
T ss_pred CceEEEEEecccCcccceEEEEEecCCCeeeeecccCccchhhhhhhheecHHHHHHHHHHHHHHhccccccccCCCCCC
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeEEEEECCeEEEEEeccccceeeccCCCCCcchhhhHHHHHHHHHHHHHHhhhceee
Q psy701 95 IGRQELEIVIGDEHISFTTSKTGSLVDVNHSKDPDGLRCFYYLVQDLKCLVFSLIGLHYKI 155 (158)
Q Consensus 95 ~GrQELEI~~g~~HisF~tsKiGSl~dvq~S~DPeGLr~FyYLvqDLKclvfsLi~lHFki 155 (158)
+|||||||+|||+||||+|||||||.|||+|+||+|||+||||||||||||||||+|||||
T Consensus 81 ~GrQELEI~~g~~HisF~TsKigSl~dv~~S~DPeGLr~FyylvqDlkclvfsLi~lHfkI 141 (141)
T d1rk8b_ 81 VGRQELEIVIGDEHISFTTSKTGSLVDVNRSKDPEGLRCFYYLVQDLKCLVFSLIGLHFKI 141 (141)
T ss_dssp SCEEEEEEEETTEEEEEEEECCCSHHHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred cCcEEEEEEECCEEEEEEecccccHhhhccCCCchHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 9999999999999999999999999999999999999999999999999999999999997
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