Psyllid ID: psy7022

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120----
Protein Sequence
MLGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSSLDQVKKRFDMNKKKYEQKKKDYDIEQRMRELKEEEEKLKEYRRERRKEKKRKLDDGEEEEEGDQSDLAAIMGFSGFGGGKKK
Secondary Structure (PSIPRED)
cccccccccccccccHHHHHHHHccHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHccccccccccc
Secondary Structure Prediction (SSPRO)
cccEEccccccEEcccHHHHHHHccHHHHHHcccccEEEHccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHccccccccccc
Coil and Loop (DISEMBL)
mlgyycnvcdcvvkdsinfldhingkkhqrnlgmsmrvERSSLDQVKKRFDMNKKKYEQKKKDYDIEQRMRELKEEEEKLKEYRRERRKEKKrklddgeeeeegdqsDLAAIMgfsgfgggkkk
Flexible Loop (DISEMBL)
MLGYYCNVCDCVVKDSINFLDHINGKkhqrnlgmsmrverssldqvkkrfdmnkkkyeqkkkdydieqRMRElkeeeeklkeyrrerrkekkrklddgeeeeegdqsdlaaimgfsgfgggkkk
Low Complexity Region (SEG)
MLGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSSLDQVKKRFDMNkkkyeqkkkdydIEQRMrelkeeeeklkeyrrerrkekkrklddgeeeeegdQSDLAAIMgfsgfgggkkk
Disordered region (IsUnstruct)
*LGYYCNVCDCVVKDSINFLDHING***************************************************************************************************
Disordered Region (DISOPRED)
MLGYYCNVCDCVVKDSINFLDHINGKKHQRNLG****VERSSLDQVKKRF*************************************************************IMGFS*FG*****
Disordered Region (DISEMBL)
MLGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSSLDQVKKRFDMNKKKYEQKKKDYDIEQRMRELKEEEEKLKE************************SDLAAIMGFSGFGGGKKK
Disordered Region (DISPRO)
*LGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSSLDQVKKRFDMNKKKYEQKKKDYDIEQRMRELKEEEEKLKEYRRERR************************************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSSLDQVKKRFDMNKKKYEQKKKDYDxxxxxxxxxxxxxxxxxxxxxxxxxxxxKLDDGEEEEEGDQSDLAAIMGFSGFGGGKKK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	124	2.2.26 [Sep-21-2011]
Q9CPW7	199	Zinc finger matrin-type p	yes	N/A	0.975	0.608	0.731	6e-38
Q96NC0	199	Zinc finger matrin-type p	yes	N/A	0.975	0.608	0.731	6e-38
P34670	407	Putative zinc finger prot	no	N/A	0.975	0.297	0.449	4e-24
Q09776	173	U4/U6.U5 small nuclear ri	yes	N/A	0.911	0.653	0.316	5e-12
Q12368	194	23 kDa U4/U6.U5 small nuc	yes	N/A	0.895	0.572	0.273	0.0002

>sp|Q9CPW7|ZMAT2_MOUSE Zinc finger matrin-type protein 2 OS=Mus musculus GN=Zmat2 PE=2 SV=1

 Score =  155 bits (393), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 90/123 (73%), Positives = 108/123 (87%), Gaps = 2/123 (1%)

Query: 1   MLGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSSLDQVKKRFDMNKKKYEQK 60
           M GYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERS+LDQVKKRF++NKKK E+K
Sbjct: 77  MGGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSTLDQVKKRFEVNKKKMEEK 136

Query: 61  KKDYDIEQRMRELKEEEEKLKEYRRERRKEKKRKLDDGEEEEEGDQSDLAAIMGFSGFGG 120
           +KDYD E+RM+EL+EEEEK K Y++E++KEKKR+ ++    EE D+  +AA+MGFSGFG 
Sbjct: 137 QKDYDFEERMKELREEEEKAKAYKKEKQKEKKRRAEEDLTFEEDDE--MAAVMGFSGFGS 194

Query: 121 GKK 123
            KK
Sbjct: 195 TKK 197

Mus musculus (taxid: 10090)

>sp|Q96NC0|ZMAT2_HUMAN Zinc finger matrin-type protein 2 OS=Homo sapiens GN=ZMAT2 PE=1 SV=1

 Score =  155 bits (393), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 90/123 (73%), Positives = 108/123 (87%), Gaps = 2/123 (1%)

Query: 1   MLGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSSLDQVKKRFDMNKKKYEQK 60
           M GYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERS+LDQVKKRF++NKKK E+K
Sbjct: 77  MGGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSTLDQVKKRFEVNKKKMEEK 136

Query: 61  KKDYDIEQRMRELKEEEEKLKEYRRERRKEKKRKLDDGEEEEEGDQSDLAAIMGFSGFGG 120
           +KDYD E+RM+EL+EEEEK K Y++E++KEKKR+ ++    EE D+  +AA+MGFSGFG 
Sbjct: 137 QKDYDFEERMKELREEEEKAKAYKKEKQKEKKRRAEEDLTFEEDDE--MAAVMGFSGFGS 194

Query: 121 GKK 123
            KK
Sbjct: 195 TKK 197

Homo sapiens (taxid: 9606)

>sp|P34670|YO14_CAEEL Putative zinc finger protein ZK686.4 OS=Caenorhabditis elegans GN=ZK686.4 PE=2 SV=1

 Score =  109 bits (273), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 58/129 (44%), Positives = 95/129 (73%), Gaps = 8/129 (6%)

Query: 3   GYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSSLDQVKKRFDMNKKKYEQKKK 62
           G+YC+VCDCVVKDSINFLDHINGK HQRN+GMSM+ ++S++  V++RF + K K E++KK
Sbjct: 279 GFYCDVCDCVVKDSINFLDHINGKNHQRNIGMSMKTKKSTVADVRERFKLMKDKKEREKK 338

Query: 63  DYDIEQRMRELKEEEEKLKEYRRERRKE-KKRKLDD-------GEEEEEGDQSDLAAIMG 114
           +  +EQ + +++EEE ++ +++++++ + +KRK D         +E++ G   ++ A+MG
Sbjct: 339 EAQVEQLLEDVQEEEARMADFKKDKKTDNRKRKRDTRKDEEEDDDEDDSGLDPEIRAMMG 398

Query: 115 FSGFGGGKK 123
           FSGF   K+
Sbjct: 399 FSGFSTSKR 407

Caenorhabditis elegans (taxid: 6239)

>sp|Q09776|SNU23_SCHPO U4/U6.U5 small nuclear ribonucleoprotein component snu23 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=snu23 PE=3 SV=4

 Score = 69.7 bits (169), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 71/120 (59%), Gaps = 7/120 (5%)

Query: 3   GYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSSLDQVKKRFDMNKKKY---EQ 59
           G+YC  C+   KDS+++LDH+N  +H R     +  +R++L++VK+R +  +++    E+
Sbjct: 54  GWYCEACNETYKDSLSWLDHLNSTQHLRKTRTVIIEKRATLEEVKERMEYWRRQLLEPEK 113

Query: 60  KKKDYDIEQRMRELKEEEEKLKEYRRERRKEKKRKLDDGEEEEEGDQSDLAAIMGFSGFG 119
             ++Y +++R+    +E E     ++ RRK+KK   +       G+ ++LAAIMG S FG
Sbjct: 114 GSEEYSLKERVERYHQELEA----KKLRRKQKKVNKEKNSPRLVGENTELAAIMGISSFG 169

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q12368|SNU23_YEAST 23 kDa U4/U6.U5 small nuclear ribonucleoprotein component OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SNU23 PE=1 SV=1

 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 64/128 (50%), Gaps = 17/128 (13%)

Query: 2   LGYYCNVCDCVVKDSINFLDHINGKKHQ---RNL---GMSMRVERSSLDQVKKRFDMNKK 55
            G+YC++C+   KD++ ++DH+N K H     NL    + + + R + D  ++ F++   
Sbjct: 78  FGFYCDICNLTFKDTLQYIDHLNHKVHAIKFENLFDEPLIIDI-RDNDDVPQEEFELC-- 134

Query: 56  KYEQKKKDYDIEQRMRELKEEEEKLKEYRRERRKEKKRKLDDGEEEEEGDQSDLAAIMGF 115
            Y    KD+ +E R  E + + ++L +   E+ K+   K     E      S ++ +MGF
Sbjct: 135 -YHNLIKDF-VEVRSMETQSKRKRLLDTDVEKAKKVATKPSIESE------SKVSQMMGF 186

Query: 116 SGFGGGKK 123
           S F   KK
Sbjct: 187 SNFATSKK 194

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	124
432895643	201	PREDICTED: zinc finger matrin-type prote	0.975	0.601	0.715	4e-42
242006704	200	zinc finger protein matrin type, putativ	0.975	0.605	0.747	4e-40
291235779	200	PREDICTED: zinc finger, matrin type 2-li	0.959	0.595	0.760	1e-39
52346154	199	zinc finger, matrin-type 2 [Xenopus (Sil	0.975	0.608	0.723	3e-39
148231065	199	zinc finger, matrin-type 2 [Xenopus laev	0.975	0.608	0.723	3e-39
391346394	211	PREDICTED: zinc finger matrin-type prote	0.951	0.559	0.685	1e-38
195491704	194	GE20629 [Drosophila yakuba] gi|194179778	0.975	0.623	0.735	1e-38
91093315	199	PREDICTED: similar to zinc finger matrin	0.975	0.608	0.737	5e-38
194866392	194	GG14201 [Drosophila erecta] gi|190653655	0.975	0.623	0.727	1e-37
21355873	194	CG11586, isoform A [Drosophila melanogas	0.975	0.623	0.727	1e-37

>gi|432895643|ref|XP_004076090.1| PREDICTED: zinc finger matrin-type protein 2-like [Oryzias latipes]

 Score =  174 bits (442), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 88/123 (71%), Positives = 108/123 (87%), Gaps = 2/123 (1%)

Query: 1   MLGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSSLDQVKKRFDMNKKKYEQK 60
           M GYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSSLDQVKKRF++N+KK E+K
Sbjct: 79  MGGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSSLDQVKKRFEVNRKKMEEK 138

Query: 61  KKDYDIEQRMRELKEEEEKLKEYRRERRKEKKRKLDDGEEEEEGDQSDLAAIMGFSGFGG 120
           +K+YD E+RM+EL+EEEEK K YR+E++KE+KR+ +  E+ +  D  ++AA+MGFSGFG 
Sbjct: 139 QKEYDFEERMKELREEEEKAKAYRKEKQKERKRRAE--EDLDLEDDDEMAAVMGFSGFGS 196

Query: 121 GKK 123
            KK
Sbjct: 197 SKK 199

Source: Oryzias latipes

Species: Oryzias latipes

Genus: Oryzias

Family: Adrianichthyidae

Order: Beloniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|242006704|ref|XP_002424187.1| zinc finger protein matrin type, putative [Pediculus humanus corporis] gi|212507528|gb|EEB11449.1| zinc finger protein matrin type, putative [Pediculus humanus corporis]

 Score =  168 bits (425), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 92/123 (74%), Positives = 107/123 (86%), Gaps = 2/123 (1%)

Query: 3   GYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSSLDQVKKRFDMNKKKYEQKKK 62
           GYYCN CDCVVKDSINFLDHINGKKHQRNLGMSMRVERSSLDQVKKRF++NKKK E+K+K
Sbjct: 78  GYYCNACDCVVKDSINFLDHINGKKHQRNLGMSMRVERSSLDQVKKRFELNKKKLEEKEK 137

Query: 63  DYDIEQRMRELKEEEEKLKEYRRERRKEKKRKLDDGEEE--EEGDQSDLAAIMGFSGFGG 120
           DYDIE R++ELKEEE+KLKEYR+E+++ KKR   +  +E  E G Q +L+AIMGFSGFG 
Sbjct: 138 DYDIESRVKELKEEEDKLKEYRKEQKRAKKRLHSEISKEDGESGAQDELSAIMGFSGFGS 197

Query: 121 GKK 123
            KK
Sbjct: 198 SKK 200

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|291235779|ref|XP_002737824.1| PREDICTED: zinc finger, matrin type 2-like [Saccoglossus kowalevskii]

 Score =  166 bits (421), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 92/121 (76%), Positives = 105/121 (86%), Gaps = 2/121 (1%)

Query: 3   GYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSSLDQVKKRFDMNKKKYEQKKK 62
           GYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSSLDQVKKRF++NKKK E KK+
Sbjct: 82  GYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSSLDQVKKRFELNKKKMEDKKQ 141

Query: 63  DYDIEQRMRELKEEEEKLKEYRRERRKEKKRKLDDGEEEEEGDQSDLAAIMGFSGFGGGK 122
           +YD EQRM EL+EEEEK K YR+++RKE+KRK  D  + E    SD++A+MGFSGFGG K
Sbjct: 142 EYDFEQRMTELREEEEKQKAYRKDKRKERKRKAADDLDFEV--DSDISAMMGFSGFGGSK 199

Query: 123 K 123
           K
Sbjct: 200 K 200

Source: Saccoglossus kowalevskii

Species: Saccoglossus kowalevskii

Genus: Saccoglossus

Family: Harrimaniidae

Class: Enteropneusta

Phylum: Hemichordata

Superkingdom: Eukaryota

>gi|52346154|ref|NP_001005119.1| zinc finger, matrin-type 2 [Xenopus (Silurana) tropicalis] gi|50370210|gb|AAH77058.1| zinc finger, matrin type 2 [Xenopus (Silurana) tropicalis]

 Score =  165 bits (418), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 89/123 (72%), Positives = 108/123 (87%), Gaps = 2/123 (1%)

Query: 1   MLGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSSLDQVKKRFDMNKKKYEQK 60
           M GYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERS+LDQVKKRF++NKKK E+K
Sbjct: 77  MGGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSTLDQVKKRFEVNKKKMEEK 136

Query: 61  KKDYDIEQRMRELKEEEEKLKEYRRERRKEKKRKLDDGEEEEEGDQSDLAAIMGFSGFGG 120
           +KDYD E+RM+EL+EEEEK + Y++E+++EKKRK ++    EE D+  +AA+MGFSGFG 
Sbjct: 137 QKDYDFEERMKELREEEEKARAYKKEKQREKKRKAEEDLGFEEDDE--MAAVMGFSGFGS 194

Query: 121 GKK 123
            KK
Sbjct: 195 SKK 197

Source: Xenopus (Silurana) tropicalis

Species: Xenopus (Silurana) tropicalis

Genus: Xenopus

Family: Pipidae

Order: Anura

Class: Amphibia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|148231065|ref|NP_001088651.1| zinc finger, matrin-type 2 [Xenopus laevis] gi|55715630|gb|AAH86293.1| Zmat2-prov protein [Xenopus laevis]

 Score =  165 bits (418), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 89/123 (72%), Positives = 108/123 (87%), Gaps = 2/123 (1%)

Query: 1   MLGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSSLDQVKKRFDMNKKKYEQK 60
           M GYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERS+LDQVKKRF++NKKK E+K
Sbjct: 77  MGGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSTLDQVKKRFEVNKKKMEEK 136

Query: 61  KKDYDIEQRMRELKEEEEKLKEYRRERRKEKKRKLDDGEEEEEGDQSDLAAIMGFSGFGG 120
           +KDYD E+RM+EL+EEEEK + Y++E+++EKKRK ++    EE D+  +AA+MGFSGFG 
Sbjct: 137 QKDYDFEERMKELREEEEKARAYKKEKQREKKRKAEEDLGFEEDDE--MAAVMGFSGFGS 194

Query: 121 GKK 123
            KK
Sbjct: 195 SKK 197

Source: Xenopus laevis

Species: Xenopus laevis

Genus: Xenopus

Family: Pipidae

Order: Anura

Class: Amphibia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|391346394|ref|XP_003747459.1| PREDICTED: zinc finger matrin-type protein 2-like [Metaseiulus occidentalis]

 Score =  163 bits (413), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 83/121 (68%), Positives = 108/121 (89%), Gaps = 3/121 (2%)

Query: 3   GYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSSLDQVKKRFDMNKKKYEQKKK 62
           GYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSM+VERSSLDQVK R +MN++K E+KKK
Sbjct: 92  GYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMKVERSSLDQVKNRLEMNRRKVEEKKK 151

Query: 63  DYDIEQRMRELKEEEEKLKEYRRERRKEKKRKLDDGEEEEEGDQSDLAAIMGFSGFGGGK 122
           +Y++ +R+RE++EE E++KE+++E++KEK+RK+D    E++G   D+AA+MGFSGFGG K
Sbjct: 152 EYNLSERIREVEEETERMKEHQKEKKKEKRRKID---SEDQGLDPDMAAMMGFSGFGGSK 208

Query: 123 K 123
           K
Sbjct: 209 K 209

Source: Metaseiulus occidentalis

Species: Metaseiulus occidentalis

Genus: Metaseiulus

Family: Phytoseiidae

Order: Mesostigmata

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195491704|ref|XP_002093677.1| GE20629 [Drosophila yakuba] gi|194179778|gb|EDW93389.1| GE20629 [Drosophila yakuba]

 Score =  163 bits (413), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 89/121 (73%), Positives = 107/121 (88%)

Query: 3   GYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSSLDQVKKRFDMNKKKYEQKKK 62
           GYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSM+VERS++DQVK+RF  NKKK E+K+K
Sbjct: 72  GYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMKVERSTVDQVKERFQQNKKKMEEKQK 131

Query: 63  DYDIEQRMRELKEEEEKLKEYRRERRKEKKRKLDDGEEEEEGDQSDLAAIMGFSGFGGGK 122
           DY++E+R+RE KEEE++ KE+R+E+RKE+KRK DD + E  G   D+AAIMGFSGFGG K
Sbjct: 132 DYELERRLREAKEEEDRYKEHRKEKRKERKRKADDTDFESGGMPDDMAAIMGFSGFGGSK 191

Query: 123 K 123
           K
Sbjct: 192 K 192

Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91093315|ref|XP_967938.1| PREDICTED: similar to zinc finger matrin-type protein 2 [Tribolium castaneum] gi|270014187|gb|EFA10635.1| hypothetical protein TcasGA2_TC016272 [Tribolium castaneum]

 Score =  161 bits (407), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 90/122 (73%), Positives = 105/122 (86%), Gaps = 1/122 (0%)

Query: 3   GYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSSLDQVKKRFDMNKKKYEQKKK 62
           GYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMR+ERSSLD VK+RFD NK+K E+KKK
Sbjct: 79  GYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRIERSSLDAVKRRFDQNKRKMEEKKK 138

Query: 63  DYDIEQRMRELKEEEEKLKEYRRERRKEKKRKLDDGEEEEEGDQSDLAAIMGFSGFGGGK 122
           DYD+  RM+E+ EEEEKL+EYRRE+RKEK++  +  EE  E   S+LA+IMGF+GFG  K
Sbjct: 139 DYDMAARMQEIAEEEEKLREYRREKRKEKRKAEEMLEETSE-QASELASIMGFAGFGSSK 197

Query: 123 KK 124
           KK
Sbjct: 198 KK 199

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194866392|ref|XP_001971872.1| GG14201 [Drosophila erecta] gi|190653655|gb|EDV50898.1| GG14201 [Drosophila erecta]

 Score =  160 bits (404), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 88/121 (72%), Positives = 107/121 (88%)

Query: 3   GYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSSLDQVKKRFDMNKKKYEQKKK 62
           GYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSM+VERS++DQVK+RF  NKKK E+K+K
Sbjct: 72  GYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMKVERSTVDQVKERFQQNKKKMEEKQK 131

Query: 63  DYDIEQRMRELKEEEEKLKEYRRERRKEKKRKLDDGEEEEEGDQSDLAAIMGFSGFGGGK 122
           DY++E+R+RE KEEE++ KE+R+E+RKE+KRK +D + E  G   D+AAIMGFSGFGG K
Sbjct: 132 DYELERRLREAKEEEDRYKEHRKEKRKERKRKAEDTDFETGGMPDDMAAIMGFSGFGGSK 191

Query: 123 K 123
           K
Sbjct: 192 K 192

Source: Drosophila erecta

Species: Drosophila erecta

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|21355873|ref|NP_647881.1| CG11586, isoform A [Drosophila melanogaster] gi|442630164|ref|NP_001261410.1| CG11586, isoform B [Drosophila melanogaster] gi|195337405|ref|XP_002035319.1| GM13992 [Drosophila sechellia] gi|7292469|gb|AAF47873.1| CG11586, isoform A [Drosophila melanogaster] gi|16769618|gb|AAL29028.1| LD44732p [Drosophila melanogaster] gi|194128412|gb|EDW50455.1| GM13992 [Drosophila sechellia] gi|220944376|gb|ACL84731.1| CG11586-PA [synthetic construct] gi|220954248|gb|ACL89667.1| CG11586-PA [synthetic construct] gi|323301116|gb|ADX35900.1| MIP29039p [Drosophila melanogaster] gi|440215294|gb|AGB94105.1| CG11586, isoform B [Drosophila melanogaster]

 Score =  160 bits (404), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 88/121 (72%), Positives = 107/121 (88%)

Query: 3   GYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSSLDQVKKRFDMNKKKYEQKKK 62
           GYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSM+VERS++DQVK+RF  NKKK E+K+K
Sbjct: 72  GYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMKVERSTVDQVKERFQQNKKKMEEKQK 131

Query: 63  DYDIEQRMRELKEEEEKLKEYRRERRKEKKRKLDDGEEEEEGDQSDLAAIMGFSGFGGGK 122
           DY++E+R+RE KEEE++ KE+R+E+RKE+KRK +D + E  G   D+AAIMGFSGFGG K
Sbjct: 132 DYELERRLREAKEEEDRYKEHRKEKRKERKRKAEDTDFESGGMPDDMAAIMGFSGFGGSK 191

Query: 123 K 123
           K
Sbjct: 192 K 192

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	124
ZFIN|ZDB-GENE-030131-3197	198	zmat2 "zinc finger, matrin typ	0.564	0.353	0.757	4.2e-24
UNIPROTKB|F1NDH4	199	ZMAT2 "Uncharacterized protein	0.564	0.351	0.742	8.7e-24
UNIPROTKB|Q5ZIF6	199	ZMAT2 "Uncharacterized protein	0.564	0.351	0.742	8.7e-24
UNIPROTKB|Q0P584	199	ZMAT2 "Uncharacterized protein	0.564	0.351	0.742	8.7e-24
UNIPROTKB|E2QZ35	199	ZMAT2 "Uncharacterized protein	0.564	0.351	0.742	8.7e-24
UNIPROTKB|Q96NC0	199	ZMAT2 "Zinc finger matrin-type	0.564	0.351	0.742	8.7e-24
UNIPROTKB|I3LF90	199	ZMAT2 "Uncharacterized protein	0.564	0.351	0.742	8.7e-24
MGI|MGI:1913742	199	Zmat2 "zinc finger, matrin typ	0.564	0.351	0.742	8.7e-24
RGD|1583592	199	Zmat2 "zinc finger, matrin typ	0.564	0.351	0.742	8.7e-24
FB|FBgn0035520	194	CG11586 [Drosophila melanogast	0.548	0.350	0.691	4.3e-22

ZFIN|ZDB-GENE-030131-3197 zmat2 "zinc finger, matrin type 2" [Danio rerio (taxid:7955)]

 Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
 Identities = 53/70 (75%), Positives = 56/70 (80%)

Query:     1 MLGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSSLDQVKKRFDMNXXXXXXX 60
             M GYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSSLDQVKKRF++N       
Sbjct:    76 MGGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSSLDQVKKRFEVNKKKLEEK 135

Query:    61 XXXXXIEQRM 70
                   E+RM
Sbjct:   136 QKEYDFEERM 145

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|F1NDH4 ZMAT2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
 Identities = 52/70 (74%), Positives = 56/70 (80%)

Query:     1 MLGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSSLDQVKKRFDMNXXXXXXX 60
             M GYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERS+LDQVKKRF++N       
Sbjct:    77 MGGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSTLDQVKKRFEVNKKKMEEK 136

Query:    61 XXXXXIEQRM 70
                   E+RM
Sbjct:   137 QKDYDFEERM 146

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|Q5ZIF6 ZMAT2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
 Identities = 52/70 (74%), Positives = 56/70 (80%)

Query:     1 MLGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSSLDQVKKRFDMNXXXXXXX 60
             M GYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERS+LDQVKKRF++N       
Sbjct:    77 MGGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSTLDQVKKRFEVNKKKMEEK 136

Query:    61 XXXXXIEQRM 70
                   E+RM
Sbjct:   137 QKDYDFEERM 146

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|Q0P584 ZMAT2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
 Identities = 52/70 (74%), Positives = 56/70 (80%)

Query:     1 MLGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSSLDQVKKRFDMNXXXXXXX 60
             M GYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERS+LDQVKKRF++N       
Sbjct:    77 MGGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSTLDQVKKRFEVNKKKMEEK 136

Query:    61 XXXXXIEQRM 70
                   E+RM
Sbjct:   137 QKDYDFEERM 146

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|E2QZ35 ZMAT2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
 Identities = 52/70 (74%), Positives = 56/70 (80%)

Query:     1 MLGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSSLDQVKKRFDMNXXXXXXX 60
             M GYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERS+LDQVKKRF++N       
Sbjct:    77 MGGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSTLDQVKKRFEVNKKKMEEK 136

Query:    61 XXXXXIEQRM 70
                   E+RM
Sbjct:   137 QKDYDFEERM 146

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|Q96NC0 ZMAT2 "Zinc finger matrin-type protein 2" [Homo sapiens (taxid:9606)]

 Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
 Identities = 52/70 (74%), Positives = 56/70 (80%)

Query:     1 MLGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSSLDQVKKRFDMNXXXXXXX 60
             M GYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERS+LDQVKKRF++N       
Sbjct:    77 MGGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSTLDQVKKRFEVNKKKMEEK 136

Query:    61 XXXXXIEQRM 70
                   E+RM
Sbjct:   137 QKDYDFEERM 146

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|I3LF90 ZMAT2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
 Identities = 52/70 (74%), Positives = 56/70 (80%)

Query:     1 MLGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSSLDQVKKRFDMNXXXXXXX 60
             M GYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERS+LDQVKKRF++N       
Sbjct:    77 MGGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSTLDQVKKRFEVNKKKMEEK 136

Query:    61 XXXXXIEQRM 70
                   E+RM
Sbjct:   137 QKDYDFEERM 146

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

MGI|MGI:1913742 Zmat2 "zinc finger, matrin type 2" [Mus musculus (taxid:10090)]

 Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
 Identities = 52/70 (74%), Positives = 56/70 (80%)

Query:     1 MLGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSSLDQVKKRFDMNXXXXXXX 60
             M GYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERS+LDQVKKRF++N       
Sbjct:    77 MGGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSTLDQVKKRFEVNKKKMEEK 136

Query:    61 XXXXXIEQRM 70
                   E+RM
Sbjct:   137 QKDYDFEERM 146

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

RGD|1583592 Zmat2 "zinc finger, matrin type 2" [Rattus norvegicus (taxid:10116)]

 Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
 Identities = 52/70 (74%), Positives = 56/70 (80%)

Query:     1 MLGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSSLDQVKKRFDMNXXXXXXX 60
             M GYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERS+LDQVKKRF++N       
Sbjct:    77 MGGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSTLDQVKKRFEVNKKKMEEK 136

Query:    61 XXXXXIEQRM 70
                   E+RM
Sbjct:   137 QKDYDFEERM 146

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

FB|FBgn0035520 CG11586 [Drosophila melanogaster (taxid:7227)]

 Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
 Identities = 47/68 (69%), Positives = 54/68 (79%)

Query:     3 GYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSSLDQVKKRFDMNXXXXXXXXX 62
             GYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSM+VERS++DQVK+RF  N         
Sbjct:    72 GYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMKVERSTVDQVKERFQQNKKKMEEKQK 131

Query:    63 XXXIEQRM 70
                +E+R+
Sbjct:   132 DYELERRL 139

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q96NC0	ZMAT2_HUMAN	No assigned EC number	0.7317	0.9758	0.6080	yes	N/A
Q09776	SNU23_SCHPO	No assigned EC number	0.3166	0.9112	0.6531	yes	N/A
Q9CPW7	ZMAT2_MOUSE	No assigned EC number	0.7317	0.9758	0.6080	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	124
smart00451	35	smart00451, ZnF_U1, U1-like zinc finger	2e-07
pfam12874	25	pfam12874, zf-met, Zinc-finger of C2H2 type	4e-05
pfam03154	979	pfam03154, Atrophin-1, Atrophin-1 family	2e-04
pfam12171	27	pfam12171, zf-C2H2_jaz, Zinc-finger double-strande	5e-04

>gnl|CDD|197732 smart00451, ZnF_U1, U1-like zinc finger

 Score = 43.8 bits (104), Expect = 2e-07
 Identities = 12/30 (40%), Positives = 20/30 (66%)

Query: 3  GYYCNVCDCVVKDSINFLDHINGKKHQRNL 32
          G+YC +C+    D I+   H+ GKKH++N+
Sbjct: 3  GFYCKLCNVTFTDEISVEAHLKGKKHKKNV 32

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins. Length = 35

>gnl|CDD|205121 pfam12874, zf-met, Zinc-finger of C2H2 type

 Score = 37.9 bits (89), Expect = 4e-05
 Identities = 8/25 (32%), Positives = 12/25 (48%)

Query: 4  YYCNVCDCVVKDSINFLDHINGKKH 28
          +YC +C+           H+ GKKH
Sbjct: 1  FYCELCNVTFTSESQLKSHLRGKKH 25

This is a zinc-finger domain with the CxxCx(12)Hx(6)H motif, found in multiple copies in a wide range of proteins from plants to metazoans. Some member proteins, particularly those from plants, are annotated as being RNA-binding. Length = 25

>gnl|CDD|217393 pfam03154, Atrophin-1, Atrophin-1 family

 Score = 39.3 bits (91), Expect = 2e-04
 Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 2/57 (3%)

Query: 54  KKKYE-QKKKDYDIEQRMRELKE-EEEKLKEYRRERRKEKKRKLDDGEEEEEGDQSD 108
           KK+ E  +K   + EQ+ RE +E E+EK KE  RER +E +R         E   S+
Sbjct: 579 KKREEAVEKAKREAEQKAREEREREKEKEKEREREREREAERAAKASSSSHESRMSE 635

Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteristic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity. Length = 979

>gnl|CDD|204841 pfam12171, zf-C2H2_jaz, Zinc-finger double-stranded RNA-binding

 Score = 34.9 bits (81), Expect = 5e-04
 Identities = 9/26 (34%), Positives = 13/26 (50%)

Query: 4  YYCNVCDCVVKDSINFLDHINGKKHQ 29
          +YC  CD   K      +H+  KKH+
Sbjct: 2  FYCVACDKYFKSENALENHLKSKKHK 27

This domain family is found in archaea and eukaryotes, and is approximately 30 amino acids in length. The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. Length = 27

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	124
KOG4727|consensus	193		100.0
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	99.03
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	98.87
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	98.7
PF08648	180	DUF1777: Protein of unknown function (DUF1777); In	98.4
PF06220	38	zf-U1: U1 zinc finger; InterPro: IPR013085 Zinc fi	98.28
KOG0717|consensus	508		97.87
COG5188	470	PRP9 Splicing factor 3a, subunit 3 [RNA processing	97.52
KOG3454|consensus	165		97.22
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.06
KOG3408|consensus	129		96.95
KOG3263|consensus	196		96.71
PF07535	49	zf-DBF: DBF zinc finger; InterPro: IPR006572 Zinc	96.69
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	96.55
KOG2837|consensus	309		96.5
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	96.36
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	96.27
COG5112	126	UFD2 U1-like Zn-finger-containing protein [General	95.88
PHA02768	55	hypothetical protein; Provisional	95.78
PF03194	254	LUC7: LUC7 N_terminus; InterPro: IPR004882 This fa	95.6
KOG2384|consensus	223		95.51
PLN02748	468	tRNA dimethylallyltransferase	95.42
smart00355	26	ZnF_C2H2 zinc finger.	95.26
smart00586	49	ZnF_DBF Zinc finger in DBF-like proteins.	95.07
KOG3032|consensus	264		94.67
KOG2785|consensus	390		94.41
COG4049	65	Uncharacterized protein containing archaeal-type C	93.97
KOG0150|consensus	336		93.82
PHA00616	44	hypothetical protein	91.9
KOG0227|consensus	222		90.5
PF14968	336	CCDC84: Coiled coil protein 84	90.23
KOG0796|consensus	319		90.03
KOG2785|consensus	390		89.99
COG5136	188	U1 snRNP-specific protein C [RNA processing and mo	89.7
COG5246	222	PRP11 Splicing factor 3a, subunit 2 [RNA processin	88.63
PF11931	196	DUF3449: Domain of unknown function (DUF3449); Int	88.5
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	88.16
PTZ00448	373	hypothetical protein; Provisional	86.73
smart00734	26	ZnF_Rad18 Rad18-like CCHC zinc finger. Yeast Rad18	85.54
PF06658	142	DUF1168: Protein of unknown function (DUF1168); In	83.53
PF14968	336	CCDC84: Coiled coil protein 84	82.78
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	82.74
PF04959	214	ARS2: Arsenite-resistance protein 2; InterPro: IPR	82.7
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	81.13
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	80.42

>KOG4727|consensus

Probab=100.00  E-value=1.2e-45  Score=284.87  Aligned_cols=121  Identities=69%  Similarity=1.122  Sum_probs=111.0

Q ss_pred             CCCccccccCceecchhhHhhhhccHHHHHHhccccccccccHHHHHHHHHHHHHHHHhhhhcccHHHHHHHHHHHHHHH
Q psy7022           1 MLGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSSLDQVKKRFDMNKKKYEQKKKDYDIEQRMRELKEEEEKL   80 (124)
Q Consensus         1 ~~gfyC~vCd~~fkDs~~~ldHlngk~H~~~~G~s~~ver~tle~V~~rl~~lk~k~~~~~~~~~~~eRl~~~~eeEek~   80 (124)
                      ++||||.||||+|+||++|||||||+.|++|+||||+|+|+||+||+.||+.++.+.+.....+++++||.+.+++|++.
T Consensus        73 ~~GyyCdVCdcvvKDSinflDHiNgKkHqrnlgmsm~verst~~qv~erf~~~k~k~~~~~ke~~vE~r~~e~qeee~rl  152 (193)
T KOG4727|consen   73 KGGYYCDVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSTLDQVKERFEQNKKKMEEKQKEYDVEERLRETQEEEERL  152 (193)
T ss_pred             cCceeeeecceeehhhHHHHHHhccHHHHHHHhhhhcchhhhHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence            48999999999999999999999999999999999999999999999999999998888889999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhccCCccccCChHHHHHHhCCCCCCCCCC
Q psy7022          81 KEYRRERRKEKKRKLDDGEEEEEGDQSDLAAIMGFSGFGGGKK  123 (124)
Q Consensus        81 re~rr~kkkekk~~~~~~~~~~~~~~~emaamMGF~gFGssKK  123 (124)
                      +..+++|++++|+...+..+.+  ..|||+|||||||||+|||
T Consensus       153 kd~~kEK~ke~K~~t~~di~~e--s~~~~~amMGFSgF~tsKk  193 (193)
T KOG4727|consen  153 KDTRKEKKKEKKRATKEDIDFE--SKDEMAAMMGFSGFGTSKK  193 (193)
T ss_pred             HHHHHHHHHHHhhccccccccc--ccHHHHHHhCccccccCCC
Confidence            9999999988887765432222  2489999999999999997

>smart00451 ZnF_U1 U1-like zinc finger

Probab=99.03  E-value=1.3e-10  Score=66.48  Aligned_cols=33  Identities=36%  Similarity=0.874  Sum_probs=30.4

Q ss_pred             CCCccccccCceecchhhHhhhhccHHHHHHhc
Q psy7022           1 MLGYYCNVCDCVVKDSINFLDHINGKKHQRNLG   33 (124)
Q Consensus         1 ~~gfyC~vCd~~fkDs~~~ldHlngk~H~~~~G   33 (124)
                      .++|||++|+++|.++.+|..|++|++|..++.
T Consensus         1 ~~~~~C~~C~~~~~~~~~~~~H~~gk~H~~~~~   33 (35)
T smart00451        1 TGGFYCKLCNVTFTDEISVEAHLKGKKHKKNVK   33 (35)
T ss_pred             CcCeEccccCCccCCHHHHHHHHChHHHHHHHH
Confidence            478999999999999999999999999998754

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=98.87  E-value=1.1e-09  Score=60.35  Aligned_cols=27  Identities=30%  Similarity=0.755  Sum_probs=25.2

Q ss_pred             CccccccCceecchhhHhhhhccHHHH
Q psy7022           3 GYYCNVCDCVVKDSINFLDHINGKKHQ   29 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlngk~H~   29 (124)
                      -|||++||++|.+..+|..|++|+.|.
T Consensus         1 q~~C~~C~k~f~~~~~~~~H~~sk~Hk   27 (27)
T PF12171_consen    1 QFYCDACDKYFSSENQLKQHMKSKKHK   27 (27)
T ss_dssp             -CBBTTTTBBBSSHHHHHCCTTSHHHH
T ss_pred             CCCcccCCCCcCCHHHHHHHHccCCCC
Confidence            389999999999999999999999994

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=98.70  E-value=7.9e-09  Score=55.38  Aligned_cols=25  Identities=28%  Similarity=0.816  Sum_probs=24.5

Q ss_pred             ccccccCceecchhhHhhhhccHHH
Q psy7022           4 YYCNVCDCVVKDSINFLDHINGKKH   28 (124)
Q Consensus         4 fyC~vCd~~fkDs~~~ldHlngk~H   28 (124)
                      |||.+|+++|.+..+|..|++|+.|
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~~H   25 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSKKH   25 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTHHH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcCCC
Confidence            8999999999999999999999998

>PF08648 DUF1777: Protein of unknown function (DUF1777); InterPro: IPR013957 This entry shows eukaryotic proteins of unknown function

Probab=98.40  E-value=1.2e-07  Score=72.07  Aligned_cols=18  Identities=39%  Similarity=0.874  Sum_probs=15.9

Q ss_pred             hHHHHHHhCCCCCCCCCC
Q psy7022         106 QSDLAAIMGFSGFGGGKK  123 (124)
Q Consensus       106 ~~emaamMGF~gFGssKK  123 (124)
                      +.+||+||||+||||||-
T Consensus       126 e~~mmk~MGf~gF~TTKg  143 (180)
T PF08648_consen  126 EEEMMKMMGFGGFGTTKG  143 (180)
T ss_pred             HHHHHHhhcccccccCCC
Confidence            457999999999999985

Some of the proteins are putative nucleic acid binding proteins.

>PF06220 zf-U1: U1 zinc finger; InterPro: IPR013085 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.28  E-value=4e-07  Score=54.65  Aligned_cols=32  Identities=38%  Similarity=0.636  Sum_probs=18.2

Q ss_pred             CCCccccccCcee-cch-hhHhhhhccHHHHHHh
Q psy7022           1 MLGYYCNVCDCVV-KDS-INFLDHINGKKHQRNL   32 (124)
Q Consensus         1 ~~gfyC~vCd~~f-kDs-~~~ldHlngk~H~~~~   32 (124)
                      ++.|||+.|+++| .|+ ++...|.+|.+|+.|.
T Consensus         1 m~ryyCdyC~~~~~~d~~~~Rk~H~~G~kH~~nv   34 (38)
T PF06220_consen    1 MPRYYCDYCKKYLTHDSPSIRKQHERGWKHKENV   34 (38)
T ss_dssp             --S-B-TTT--B-S--SHHHHHHHT--THHHHHH
T ss_pred             CcCeecccccceecCCChHHHHHhhccHHHHHHH
Confidence            4689999999999 677 4669999999999875

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. C2H2-type (classical) zinc fingers (Znf) were the first class to be characterised. They contain a short beta hairpin and an alpha helix (beta/beta/alpha structure), where a single zinc atom is held in place by Cys(2)His(2) (C2H2) residues in a tetrahedral array. C2H2 Znf's can be divided into three groups based on the number and pattern of fingers: triple-C2H2 (binds single ligand), multiple-adjacent-C2H2 (binds multiple ligands), and separated paired-C2H2 []. C2H2 Znf's are the most common DNA-binding motifs found in eukaryotic transcription factors, and have also been identified in prokaryotes []. Transcription factors usually contain several Znf's (each with a conserved beta/beta/alpha structure) capable of making multiple contacts along the DNA, where the C2H2 Znf motifs recognise DNA sequences by binding to the major groove of DNA via a short alpha-helix in the Znf, the Znf spanning 3-4 bases of the DNA []. C2H2 Znf's can also bind to RNA and protein targets []. This entry represents a C2H2-type zinc finger motif found in several U1 small nuclear ribonucleoprotein C (U1-C) proteins. Some proteins contain multiple copies of this motif. The U1 small nuclear ribonucleoprotein (U1 snRNP) binds to the pre-mRNA 5' splice site at early stages of spliceosome assembly. Recruitment of U1 to a class of weak 5' splice site is promoted by binding of the protein TIA-1 to uridine-rich sequences immediately downstream from the 5' splice site. Binding of TIA-1 in the vicinity of a 5' splice site helps to stabilise U1 snRNP recruitment, at least in part, via a direct interaction with U1-C, thus providing one molecular mechanism for the function of this splicing regulator []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding; PDB: 2VRD_A.

>KOG0717|consensus

Probab=97.87  E-value=5.4e-06  Score=72.87  Aligned_cols=28  Identities=39%  Similarity=0.723  Sum_probs=26.9

Q ss_pred             ccccccCceecchhhHhhhhccHHHHHH
Q psy7022           4 YYCNVCDCVVKDSINFLDHINGKKHQRN   31 (124)
Q Consensus         4 fyC~vCd~~fkDs~~~ldHlngk~H~~~   31 (124)
                      +||.||+++|++-.++.+|.||++|..+
T Consensus       293 lyC~vCnKsFKseKq~kNHEnSKKHken  320 (508)
T KOG0717|consen  293 LYCVVCNKSFKSEKQLKNHENSKKHKEN  320 (508)
T ss_pred             eEEeeccccccchHHHHhhHHHHHHHHH
Confidence            8999999999999999999999999874

>COG5188 PRP9 Splicing factor 3a, subunit 3 [RNA processing and modification]

Probab=97.52  E-value=5.5e-05  Score=65.17  Aligned_cols=30  Identities=30%  Similarity=0.523  Sum_probs=28.5

Q ss_pred             CCccccccCceecchhhHhhhhccHHHHHH
Q psy7022           2 LGYYCNVCDCVVKDSINFLDHINGKKHQRN   31 (124)
Q Consensus         2 ~gfyC~vCd~~fkDs~~~ldHlngk~H~~~   31 (124)
                      .+|||++|++||+.|.+|..|+-|+.|.++
T Consensus       237 ~~~YC~~C~r~f~~~~VFe~Hl~gK~H~k~  266 (470)
T COG5188         237 PKVYCVKCGREFSRSKVFEYHLEGKRHCKE  266 (470)
T ss_pred             cceeeHhhhhHhhhhHHHHHHHhhhhhhhh
Confidence            589999999999999999999999999884

>KOG3454|consensus

Probab=97.22  E-value=0.00015  Score=56.20  Aligned_cols=32  Identities=41%  Similarity=0.834  Sum_probs=27.3

Q ss_pred             CCCccccccC-ceecchh-hHhhhhccHHHHHHh
Q psy7022           1 MLGYYCNVCD-CVVKDSI-NFLDHINGKKHQRNL   32 (124)
Q Consensus         1 ~~gfyC~vCd-~~fkDs~-~~ldHlngk~H~~~~   32 (124)
                      +..|||+.|| ..+.||+ +-..|++|.+|+.|.
T Consensus         1 MpRYyCDYCdt~LthDslsvRK~H~~GrkH~~nv   34 (165)
T KOG3454|consen    1 MPRYYCDYCDTYLTHDSLSVRKTHCGGRKHKDNV   34 (165)
T ss_pred             CCcchhhhhhhhhhcccHHHHHhhhhhHHHHHHH
Confidence            3579999999 6778887 889999999999853

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.06  E-value=0.00027  Score=36.73  Aligned_cols=22  Identities=23%  Similarity=0.567  Sum_probs=20.4

Q ss_pred             ccccccCceecchhhHhhhhcc
Q psy7022           4 YYCNVCDCVVKDSINFLDHING   25 (124)
Q Consensus         4 fyC~vCd~~fkDs~~~ldHlng   25 (124)
                      |-|+.|++.|.+...|..|+..
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            6799999999999999999975

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>KOG3408|consensus

Probab=96.95  E-value=0.00032  Score=52.29  Aligned_cols=29  Identities=28%  Similarity=0.505  Sum_probs=27.7

Q ss_pred             CCccccccCceecchhhHhhhhccHHHHH
Q psy7022           2 LGYYCNVCDCVVKDSINFLDHINGKKHQR   30 (124)
Q Consensus         2 ~gfyC~vCd~~fkDs~~~ldHlngk~H~~   30 (124)
                      |-|||..|.+.|-|+.++..|..++.|.+
T Consensus        56 GqfyCi~CaRyFi~~~~l~~H~ktK~HKr   84 (129)
T KOG3408|consen   56 GQFYCIECARYFIDAKALKTHFKTKVHKR   84 (129)
T ss_pred             ceeehhhhhhhhcchHHHHHHHhccHHHH
Confidence            57999999999999999999999999987

>KOG3263|consensus

Probab=96.71  E-value=0.00068  Score=53.35  Aligned_cols=18  Identities=44%  Similarity=0.778  Sum_probs=15.8

Q ss_pred             hHHHHHHhCCCCCCCCCC
Q psy7022         106 QSDLAAIMGFSGFGGGKK  123 (124)
Q Consensus       106 ~~emaamMGF~gFGssKK  123 (124)
                      ..||++||||+||-|||-
T Consensus       143 eiEMmk~MGf~gFDtTkg  160 (196)
T KOG3263|consen  143 EIEMMKIMGFSGFDTTKG  160 (196)
T ss_pred             HHHHHHHhCcCcccCCCC
Confidence            457999999999999974

>PF07535 zf-DBF: DBF zinc finger; InterPro: IPR006572 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.69  E-value=0.0013  Score=41.58  Aligned_cols=43  Identities=23%  Similarity=0.453  Sum_probs=31.8

Q ss_pred             CccccccCceecchhhHhhhhccHHHHHHhccccccccccHHHHHHHH
Q psy7022           3 GYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSSLDQVKKRF   50 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlngk~H~~~~G~s~~ver~tle~V~~rl   50 (124)
                      .-||+.|...|.|   |..||.|++|..=...+.+.  ..||.+-.+|
T Consensus         5 ~GYCE~C~~ky~~---l~~Hi~s~~Hr~FA~~~~Nf--~~lD~li~~l   47 (49)
T PF07535_consen    5 PGYCENCRVKYDD---LEEHIQSEKHRKFAENDSNF--KELDSLISQL   47 (49)
T ss_pred             CccCccccchhhh---HHHHhCCHHHHHHHcCcccH--HHHHHHHHHh
Confidence            5699999999986   99999999999865555553  3455554443

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. In eukaryotes, initiation of DNA replication requires the assembly of pre-replication complexes (pre-RCs) on chromatin during the G1 phase. In the S phase, pre-RCs are activated by two protein kinases, Cdk2 and Cdc7, which results in the loading of replication factors and the unwinding of replication origins by the MCM helicase complex []. Cdc7 is a serine/threonine kinase that is conserved from yeast to human. It is regulated by its association with a regulatory subunit, the Dbf4 protein. This complex is often referred to as DDK (Dbf4-dependent kinase) []. DBF4 contains an N-terminal BRCT domain and a C-terminal conserved region that could potentially coordinate one zinc atom, the DBF4-type zinc finger. This entry represents the zinc finger, which is important for the interaction with Cdc7 [, ]. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003676 nucleic acid binding, 0008270 zinc ion binding

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=96.55  E-value=0.0013  Score=35.31  Aligned_cols=22  Identities=14%  Similarity=0.404  Sum_probs=20.3

Q ss_pred             ccccccCceecchhhHhhhhcc
Q psy7022           4 YYCNVCDCVVKDSINFLDHING   25 (124)
Q Consensus         4 fyC~vCd~~fkDs~~~ldHlng   25 (124)
                      |.|.+|+.+|.+..+|..|+..
T Consensus         2 ~~C~~C~~~F~~~~~l~~H~~~   23 (27)
T PF13912_consen    2 FECDECGKTFSSLSALREHKRS   23 (27)
T ss_dssp             EEETTTTEEESSHHHHHHHHCT
T ss_pred             CCCCccCCccCChhHHHHHhHH
Confidence            7899999999999999999953

>KOG2837|consensus

Probab=96.50  E-value=0.00072  Score=56.41  Aligned_cols=54  Identities=26%  Similarity=0.432  Sum_probs=38.5

Q ss_pred             CccccccCceecchhhHhhhhccHHHHHHhccccc-----cccccHHHHHHHHHHHHHH
Q psy7022           3 GYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMR-----VERSSLDQVKKRFDMNKKK   56 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlngk~H~~~~G~s~~-----ver~tle~V~~rl~~lk~k   56 (124)
                      .|||..|-+.|+|-+.|..|+.|..|++.+-.-.-     +++-|-+=.+.-|+.|++.
T Consensus        25 RwyCqmCQkQcrDeNGFkCH~~SeSHqRql~~~~~Np~~~~~~fs~eF~~dFl~LLr~~   83 (309)
T KOG2837|consen   25 RWYCQMCQKQCRDENGFKCHTMSESHQRQLLLFALNPGRSLERFSNEFEKDFLSLLRQR   83 (309)
T ss_pred             HHHHHHHHHHhccccccccccCCHHHHHHHHHHHhCcchhHHHhHHHHHHHHHHHHHHH
Confidence            48999999999999999999999999997644322     2233333344445555554

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=96.36  E-value=0.0021  Score=32.63  Aligned_cols=21  Identities=14%  Similarity=0.586  Sum_probs=17.7

Q ss_pred             ccccccCceecchhhHhhhhc
Q psy7022           4 YYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         4 fyC~vCd~~fkDs~~~ldHln   24 (124)
                      |-|++|+.+|.+...|..|+.
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~   21 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMR   21 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHH
Confidence            679999999999999999985

...

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=96.27  E-value=0.0015  Score=43.34  Aligned_cols=29  Identities=17%  Similarity=0.584  Sum_probs=25.5

Q ss_pred             CccccccCceecchhhHhhhhccHHHHHH
Q psy7022           3 GYYCNVCDCVVKDSINFLDHINGKKHQRN   31 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlngk~H~~~   31 (124)
                      .|.|.+|+..|.+..++..||+++.|...
T Consensus        50 ~~~C~~C~~~f~s~~~l~~Hm~~~~H~~~   78 (100)
T PF12756_consen   50 SFRCPYCNKTFRSREALQEHMRSKHHKKR   78 (100)
T ss_dssp             SEEBSSSS-EESSHHHHHHHHHHTTTTC-
T ss_pred             CCCCCccCCCCcCHHHHHHHHcCccCCCc
Confidence            58999999999999999999999999873

>COG5112 UFD2 U1-like Zn-finger-containing protein [General function prediction only]

Probab=95.88  E-value=0.0025  Score=46.93  Aligned_cols=30  Identities=27%  Similarity=0.484  Sum_probs=27.9

Q ss_pred             CCccccccCceecchhhHhhhhccHHHHHH
Q psy7022           2 LGYYCNVCDCVVKDSINFLDHINGKKHQRN   31 (124)
Q Consensus         2 ~gfyC~vCd~~fkDs~~~ldHlngk~H~~~   31 (124)
                      |-|||..|++.|-.+.++..|..|+-|.+.
T Consensus        54 GqhYCieCaryf~t~~aL~~HkkgkvHkRR   83 (126)
T COG5112          54 GQHYCIECARYFITEKALMEHKKGKVHKRR   83 (126)
T ss_pred             ceeeeehhHHHHHHHHHHHHHhccchhHHH
Confidence            569999999999999999999999999873

>PHA02768 hypothetical protein; Provisional

Probab=95.78  E-value=0.0044  Score=40.16  Aligned_cols=24  Identities=25%  Similarity=0.686  Sum_probs=22.4

Q ss_pred             CCccccccCceecchhhHhhhhcc
Q psy7022           2 LGYYCNVCDCVVKDSINFLDHING   25 (124)
Q Consensus         2 ~gfyC~vCd~~fkDs~~~ldHlng   25 (124)
                      -||.|+.|++.|..+++|..|...
T Consensus         4 ~~y~C~~CGK~Fs~~~~L~~H~r~   27 (55)
T PHA02768          4 LGYECPICGEIYIKRKSMITHLRK   27 (55)
T ss_pred             cccCcchhCCeeccHHHHHHHHHh
Confidence            389999999999999999999976

>PF03194 LUC7: LUC7 N_terminus; InterPro: IPR004882 This family consists of several LUC7 protein homologues that are restricted to eukaryotes

Probab=95.60  E-value=0.02  Score=46.61  Aligned_cols=42  Identities=29%  Similarity=0.535  Sum_probs=31.2

Q ss_pred             ccccccC--ceecchh-hHhhhhccHHHHHHhccccccccccHHHHHHHHHHHHHHH
Q psy7022           4 YYCNVCD--CVVKDSI-NFLDHINGKKHQRNLGMSMRVERSSLDQVKKRFDMNKKKY   57 (124)
Q Consensus         4 fyC~vCd--~~fkDs~-~~ldHlngk~H~~~~G~s~~ver~tle~V~~rl~~lk~k~   57 (124)
                      -.|+||+  ++..|+. =+.||+.||+|+-            .-.||..|+.|+++.
T Consensus       191 ~VCeVCGA~Ls~~D~d~RladH~~GK~HlG------------y~~IR~~l~el~e~~  235 (254)
T PF03194_consen  191 EVCEVCGAFLSVGDNDRRLADHFGGKQHLG------------YAKIREKLKELKEKR  235 (254)
T ss_pred             cchhhhhhHHhccchHHHHHHHhccchhhh------------HHHHHHHHHHHHHHH
Confidence            4699999  5556666 4899999999975            445677777776654

LUC7 has been shown to be a U1 snRNA associated protein [] with a role in splice site recognition []. The entry contains human and mouse LUC7 like (LUC7L) proteins [] and human cisplatin resistance-associated overexpressed protein (CROP) [].

>KOG2384|consensus

Probab=95.51  E-value=0.0038  Score=50.20  Aligned_cols=30  Identities=30%  Similarity=0.631  Sum_probs=23.9

Q ss_pred             CCccccccCceecchhhHhhhhccHHHHHHh
Q psy7022           2 LGYYCNVCDCVVKDSINFLDHINGKKHQRNL   32 (124)
Q Consensus         2 ~gfyC~vCd~~fkDs~~~ldHlngk~H~~~~   32 (124)
                      .+|||++||..|.++ .+..|+.|--|+.++
T Consensus        83 ~lfyCE~Cd~~ip~~-~~snH~tSttHllsl  112 (223)
T KOG2384|consen   83 ALFYCEVCDIYIPNS-KKSNHFTSTTHLLSL  112 (223)
T ss_pred             ccchhhhhhhhccCC-CCccchhhHHHHhhh
Confidence            589999999999985 456788887777654

>PLN02748 tRNA dimethylallyltransferase

Probab=95.42  E-value=0.0088  Score=52.64  Aligned_cols=30  Identities=23%  Similarity=0.696  Sum_probs=27.2

Q ss_pred             CccccccCc-eecchhhHhhhhccHHHHHHh
Q psy7022           3 GYYCNVCDC-VVKDSINFLDHINGKKHQRNL   32 (124)
Q Consensus         3 gfyC~vCd~-~fkDs~~~ldHlngk~H~~~~   32 (124)
                      -|+|++|+. ++....+|.-||+|+.|.+++
T Consensus       418 ~~~Ce~C~~~~~~G~~eW~~Hlksr~Hk~~~  448 (468)
T PLN02748        418 QYVCEACGNKVLRGAHEWEQHKQGRGHRKRV  448 (468)
T ss_pred             cccccCCCCcccCCHHHHHHHhcchHHHHHH
Confidence            478999997 999999999999999998843

>smart00355 ZnF_C2H2 zinc finger

Probab=95.26  E-value=0.0097  Score=30.19  Aligned_cols=21  Identities=29%  Similarity=0.637  Sum_probs=19.6

Q ss_pred             ccccccCceecchhhHhhhhc
Q psy7022           4 YYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         4 fyC~vCd~~fkDs~~~ldHln   24 (124)
                      |-|+.|+.+|.+...+..|+.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~   21 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMR   21 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHH
Confidence            579999999999999999986

>smart00586 ZnF_DBF Zinc finger in DBF-like proteins

Probab=95.07  E-value=0.011  Score=37.47  Aligned_cols=26  Identities=27%  Similarity=0.519  Sum_probs=22.9

Q ss_pred             CCccccccCceecchhhHhhhhccHHHHH
Q psy7022           2 LGYYCNVCDCVVKDSINFLDHINGKKHQR   30 (124)
Q Consensus         2 ~gfyC~vCd~~fkDs~~~ldHlngk~H~~   30 (124)
                      ..-||+.|..-|.   .|..||.|++|..
T Consensus         4 k~GYCE~Cr~kfd---~l~~Hi~s~~Hr~   29 (49)
T smart00586        4 KPGYCENCREKYD---DLETHLLSEKHRR   29 (49)
T ss_pred             CCcccccHhHHHh---hHHHHhccHHHHH
Confidence            3569999999998   5888999999987

>KOG3032|consensus

Probab=94.67  E-value=0.02  Score=47.00  Aligned_cols=30  Identities=30%  Similarity=0.502  Sum_probs=26.6

Q ss_pred             CCCccccccCceecchhhHhhhhccHHHHHH
Q psy7022           1 MLGYYCNVCDCVVKDSINFLDHINGKKHQRN   31 (124)
Q Consensus         1 ~~gfyC~vCd~~fkDs~~~ldHlngk~H~~~   31 (124)
                      +|...|.||+.-.| .+.|.-|+||++|.-+
T Consensus        33 sgql~C~vCn~piK-p~lW~vHvnsKkHre~   62 (264)
T KOG3032|consen   33 SGQLVCRVCNVPIK-PSLWDVHVNSKKHREA   62 (264)
T ss_pred             CCCeeEEEecCccc-HHHHHHHhccHHHHHH
Confidence            45678999999999 9999999999999654

>KOG2785|consensus

Probab=94.41  E-value=0.013  Score=50.72  Aligned_cols=32  Identities=28%  Similarity=0.528  Sum_probs=28.9

Q ss_pred             CccccccCceecchhhHhhhhccHHHHHHhcc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHINGKKHQRNLGM   34 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlngk~H~~~~G~   34 (124)
                      -+||.||.+.|..+.++.+||+|+.|..++-.
T Consensus        68 ~~~c~~c~k~~~s~~a~~~hl~Sk~h~~~~~~   99 (390)
T KOG2785|consen   68 VVYCEACNKSFASPKAHENHLKSKKHVENLSN   99 (390)
T ss_pred             ceehHHhhccccChhhHHHHHHHhhcchhhhh
Confidence            48999999999999999999999999876544

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=93.97  E-value=0.016  Score=38.29  Aligned_cols=29  Identities=28%  Similarity=0.639  Sum_probs=23.9

Q ss_pred             ccccccCceecchhhHhhhhccHHHHHHhc
Q psy7022           4 YYCNVCDCVVKDSINFLDHINGKKHQRNLG   33 (124)
Q Consensus         4 fyC~vCd~~fkDs~~~ldHlngk~H~~~~G   33 (124)
                      |-|+-||..|+++-.|..|+| +.|....|
T Consensus        18 lrCPRC~~~FR~~K~Y~RHVN-KaH~~~~~   46 (65)
T COG4049          18 LRCPRCGMVFRRRKDYIRHVN-KAHGWLFG   46 (65)
T ss_pred             eeCCchhHHHHHhHHHHHHhh-HHhhhhhc
Confidence            579999999999999999998 45555443

>KOG0150|consensus

Probab=93.82  E-value=0.028  Score=47.65  Aligned_cols=30  Identities=30%  Similarity=0.564  Sum_probs=25.2

Q ss_pred             CCccccccCceecchhh-HhhhhccHHHHHH
Q psy7022           2 LGYYCNVCDCVVKDSIN-FLDHINGKKHQRN   31 (124)
Q Consensus         2 ~gfyC~vCd~~fkDs~~-~ldHlngk~H~~~   31 (124)
                      +.+||.+|-|||.|+-. -..|=-|+.|..+
T Consensus         9 ~kkfCdyCKiWi~dN~~Sv~~He~GkrHke~   39 (336)
T KOG0150|consen    9 PKKFCDYCKIWIKDNPASVRFHERGKRHKEN   39 (336)
T ss_pred             cchhhhhhhhhhcCChHHHHhHhhhhHHHHH
Confidence            57899999999999984 4556699999874

>PHA00616 hypothetical protein

Probab=91.90  E-value=0.048  Score=33.87  Aligned_cols=22  Identities=18%  Similarity=0.596  Sum_probs=20.3

Q ss_pred             ccccccCceecchhhHhhhhcc
Q psy7022           4 YYCNVCDCVVKDSINFLDHING   25 (124)
Q Consensus         4 fyC~vCd~~fkDs~~~ldHlng   25 (124)
                      |-|+-|+..|.....+..|++.
T Consensus         2 YqC~~CG~~F~~~s~l~~H~r~   23 (44)
T PHA00616          2 YQCLRCGGIFRKKKEVIEHLLS   23 (44)
T ss_pred             CccchhhHHHhhHHHHHHHHHH
Confidence            7799999999999999999953

>KOG0227|consensus

Probab=90.50  E-value=0.12  Score=41.58  Aligned_cols=32  Identities=38%  Similarity=0.699  Sum_probs=28.9

Q ss_pred             CCCccccccCceecchhhHhhhhccHHHHHHh
Q psy7022           1 MLGYYCNVCDCVVKDSINFLDHINGKKHQRNL   32 (124)
Q Consensus         1 ~~gfyC~vCd~~fkDs~~~ldHlngk~H~~~~   32 (124)
                      .|.|-|..|.-.--+-.+|+.|..|++|+-|+
T Consensus        51 ~G~yeCkLClT~H~ne~Syl~HtqGKKHq~Nl   82 (222)
T KOG0227|consen   51 LGKYECKLCLTLHNNEGSYLAHTQGKKHQTNL   82 (222)
T ss_pred             CcceeehhhhhhhcchhhhhhhhccchhhHHH
Confidence            36799999999999999999999999998865

>PF14968 CCDC84: Coiled coil protein 84

Probab=90.23  E-value=0.45  Score=40.62  Aligned_cols=30  Identities=27%  Similarity=0.848  Sum_probs=27.3

Q ss_pred             CccccccCceecch------hhHhhhhccHHHHHHh
Q psy7022           3 GYYCNVCDCVVKDS------INFLDHINGKKHQRNL   32 (124)
Q Consensus         3 gfyC~vCd~~fkDs------~~~ldHlngk~H~~~~   32 (124)
                      .|+|..||+-..+.      ...|.||.|+.|++++
T Consensus        58 ~fWC~fC~~ev~~~~s~~~~~~ai~HLaS~eH~k~v   93 (336)
T PF14968_consen   58 RFWCVFCDCEVREHDSSFACGGAIEHLASPEHRKNV   93 (336)
T ss_pred             eeEeeCccchhhhccchhhhccHHhhcCCHHHHHHH
Confidence            68999999999988      6899999999999875

>KOG0796|consensus

Probab=90.03  E-value=0.3  Score=41.53  Aligned_cols=41  Identities=27%  Similarity=0.515  Sum_probs=29.6

Q ss_pred             cccccCcee--cchh-hHhhhhccHHHHHHhccccccccccHHHHHHHHHHHHHHH
Q psy7022           5 YCNVCDCVV--KDSI-NFLDHINGKKHQRNLGMSMRVERSSLDQVKKRFDMNKKKY   57 (124)
Q Consensus         5 yC~vCd~~f--kDs~-~~ldHlngk~H~~~~G~s~~ver~tle~V~~rl~~lk~k~   57 (124)
                      .|+||+..+  .|+. =+.||+|||.|+-            --.|++.|..|+...
T Consensus       188 VCeVCGa~L~~~D~d~RlaDHf~GKlHlG------------y~~iR~~l~eLk~~~  231 (319)
T KOG0796|consen  188 VCEVCGAFLSVNDADRRLADHFGGKLHLG------------YVLIREKLAELKKEK  231 (319)
T ss_pred             HHHhhhHHHhccchHHHHHHhhcchHHHH------------HHHHHHHHHHHHHHH
Confidence            599999755  3443 5789999999976            345577777776654

>KOG2785|consensus

Probab=89.99  E-value=0.45  Score=41.37  Aligned_cols=58  Identities=17%  Similarity=0.309  Sum_probs=48.8

Q ss_pred             CCCccccccCceecchhhHhhhhccHHHHHHhc-cccccccccHHHHHHHHHHHHHHHH
Q psy7022           1 MLGYYCNVCDCVVKDSINFLDHINGKKHQRNLG-MSMRVERSSLDQVKKRFDMNKKKYE   58 (124)
Q Consensus         1 ~~gfyC~vCd~~fkDs~~~ldHlngk~H~~~~G-~s~~ver~tle~V~~rl~~lk~k~~   58 (124)
                      |+||-|..|...|.++-.--.|-.+-.|..|+- ..-.+.-.|+++.-+++......++
T Consensus         1 st~ftC~tC~v~F~~ad~Qr~HyKSdWHRYNLKRkVA~lPPItaE~F~~k~~s~~~~~~   59 (390)
T KOG2785|consen    1 STGFTCNTCNVEFDDADEQRAHYKSDWHRYNLKRKVASLPPITAEEFNEKVLSDDSEKE   59 (390)
T ss_pred             CCcceeeceeeeeccHHHHHHHhhhhHHHhhHHhHhhcCCCcCHHHHhHHHhhhhhhhh
Confidence            689999999999999999999999999988763 3445667899999999887766553

>COG5136 U1 snRNP-specific protein C [RNA processing and modification]

Probab=89.70  E-value=0.1  Score=40.95  Aligned_cols=31  Identities=26%  Similarity=0.510  Sum_probs=25.5

Q ss_pred             CCCccccccCceecc-hh-hHhhhhccHHHHHH
Q psy7022           1 MLGYYCNVCDCVVKD-SI-NFLDHINGKKHQRN   31 (124)
Q Consensus         1 ~~gfyC~vCd~~fkD-s~-~~ldHlngk~H~~~   31 (124)
                      ++.|||+.|..|+.. ++ +-..|+-|+.|.++
T Consensus         1 MpRY~CeyC~~~LthD~lsvRk~H~~G~~H~~~   33 (188)
T COG5136           1 MPRYFCEYCNKMLTHDRLSVRKMHCGGAKHGLM   33 (188)
T ss_pred             CcchHHHHHHHHHhccHHHHHHHhhhhHHHHHH
Confidence            468999999999853 33 77899999999984

>COG5246 PRP11 Splicing factor 3a, subunit 2 [RNA processing and modification]

Probab=88.63  E-value=0.23  Score=39.81  Aligned_cols=32  Identities=28%  Similarity=0.570  Sum_probs=29.1

Q ss_pred             CCCccccccCceecchhhHhhhhccHHHHHHh
Q psy7022           1 MLGYYCNVCDCVVKDSINFLDHINGKKHQRNL   32 (124)
Q Consensus         1 ~~gfyC~vCd~~fkDs~~~ldHlngk~H~~~~   32 (124)
                      +|.|.|..|.-.--+-++|+.|+.|++|.-|+
T Consensus        51 ~Gk~vC~LC~T~H~~e~Sy~~H~~GKKH~~n~   82 (222)
T COG5246          51 TGKYVCLLCKTKHLTEMSYVKHREGKKHKENS   82 (222)
T ss_pred             CCcEEeeeeccccccHHHHHHhhccchhhhhH
Confidence            46799999999999999999999999998764

>PF11931 DUF3449: Domain of unknown function (DUF3449); InterPro: IPR024598 This presumed domain is functionally uncharacterised

Probab=88.50  E-value=0.14  Score=40.77  Aligned_cols=33  Identities=30%  Similarity=0.619  Sum_probs=0.0

Q ss_pred             CccccccC-ceecchhhHhhhhccHHHH---HHhccc
Q psy7022           3 GYYCNVCD-CVVKDSINFLDHINGKKHQ---RNLGMS   35 (124)
Q Consensus         3 gfyC~vCd-~~fkDs~~~ldHlngk~H~---~~~G~s   35 (124)
                      -|+|+||+ .+|+---+|..|++...|+   +.+|++
T Consensus       101 ey~CEICGN~~Y~GrkaFekHF~E~rH~~GlrcLGI~  137 (196)
T PF11931_consen  101 EYKCEICGNQSYKGRKAFEKHFQEWRHAYGLRCLGIP  137 (196)
T ss_dssp             -------------------------------------
T ss_pred             eeeeEeCCCcceecHHHHHHhcChhHHHccChhcCCC
Confidence            59999996 6789999999999999995   456766

It has two conserved sequence motifs: PIP and CEICG and contains a zinc-finger of the C2H2-type.; PDB: 4DGW_A.

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=88.16  E-value=0.32  Score=26.34  Aligned_cols=20  Identities=15%  Similarity=0.338  Sum_probs=16.3

Q ss_pred             ccccccCceecchhhHhhhhc
Q psy7022           4 YYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         4 fyC~vCd~~fkDs~~~ldHln   24 (124)
                      .-|+.|+++| ....+..|+.
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHH
Confidence            3599999999 6778888864

>PTZ00448 hypothetical protein; Provisional

Probab=86.73  E-value=0.43  Score=41.33  Aligned_cols=31  Identities=23%  Similarity=0.338  Sum_probs=28.4

Q ss_pred             CccccccCceecchhhHhhhhccHHHHHHhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHINGKKHQRNLG   33 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlngk~H~~~~G   33 (124)
                      -|-|..|+..|.|+..+-+|.-|-.|..|+-
T Consensus       314 ~~tC~~C~v~F~~~~~qR~H~KSDwHrYNLK  344 (373)
T PTZ00448        314 MLLCRKCNIQLMDHNAFKQHYRSEWHIFNTK  344 (373)
T ss_pred             CccccccccccCCHHHHHHHhhhhHHHHHHH
Confidence            5789999999999999999999999988763

>smart00734 ZnF_Rad18 Rad18-like CCHC zinc finger

Probab=85.54  E-value=0.47  Score=26.02  Aligned_cols=19  Identities=26%  Similarity=0.384  Sum_probs=16.3

Q ss_pred             cccccCceecchhhHhhhhc
Q psy7022           5 YCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         5 yC~vCd~~fkDs~~~ldHln   24 (124)
                      -|++|+..+ ......+||.
T Consensus         3 ~CPiC~~~v-~~~~in~HLD   21 (26)
T smart00734        3 QCPVCFREV-PENLINSHLD   21 (26)
T ss_pred             cCCCCcCcc-cHHHHHHHHH
Confidence            599999999 6678889986

Yeast Rad18p functions with Rad5p in error-free post-replicative DNA repair. This zinc finger is likely to bind nucleic-acids.

>PF06658 DUF1168: Protein of unknown function (DUF1168); InterPro: IPR009548 This family consists of several hypothetical eukaryotic proteins of unknown function

Probab=83.53  E-value=5.2  Score=30.36  Aligned_cols=45  Identities=24%  Similarity=0.462  Sum_probs=28.8

Q ss_pred             HHHHHHHHHHHhhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy7022          48 KRFDMNKKKYEQKKKDYDIEQRMRELKEEEEKLKEYRRERRKEKK   92 (124)
Q Consensus        48 ~rl~~lk~k~~~~~~~~~~~eRl~~~~eeEek~re~rr~kkkekk   92 (124)
                      .||..+-...........|..++......++..-+.+++||..+|
T Consensus        50 ~Rl~~me~~~~~e~~~~eF~~kree~~~~~eekTaKkR~KR~KkK   94 (142)
T PF06658_consen   50 ERLEYMEEEAKKEKEDEEFQRKREERKKEAEEKTAKKRAKRQKKK   94 (142)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            455555444434445667888888877777777777766665443

>PF14968 CCDC84: Coiled coil protein 84

Probab=82.78  E-value=0.48  Score=40.46  Aligned_cols=27  Identities=33%  Similarity=0.603  Sum_probs=23.0

Q ss_pred             cccccCceecchhhHhhhhccHHHHHHhcc
Q psy7022           5 YCNVCDCVVKDSINFLDHINGKKHQRNLGM   34 (124)
Q Consensus         5 yC~vCd~~fkDs~~~ldHlngk~H~~~~G~   34 (124)
                      ||.||.+..--   ...|+-++.|++++-.
T Consensus         1 yC~vCr~~h~~---gr~H~Y~~~Hq~~L~~   27 (336)
T PF14968_consen    1 YCEVCRRNHDQ---GRRHVYSPKHQKSLSA   27 (336)
T ss_pred             CcchhhCcccc---cCCCccCHHHHHHHHH
Confidence            99999987654   9999999999987653

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=82.74  E-value=0.67  Score=28.79  Aligned_cols=23  Identities=13%  Similarity=0.417  Sum_probs=19.1

Q ss_pred             CccccccCceecchhhHhhhhccH
Q psy7022           3 GYYCNVCDCVVKDSINFLDHINGK   26 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlngk   26 (124)
                      .|-|++|++ .-|...|..|+...
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~   24 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDE   24 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhH
Confidence            588999999 66778999999743

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF04959 ARS2: Arsenite-resistance protein 2; InterPro: IPR007042 This entry represents Arsenite-resistance protein 2 (also known as Serrate RNA effector molecule homolog) which is thought to play a role in arsenite resistance [], although does not directly confer arsenite resistance but rather modulates arsenic sensitivity []

Probab=82.70  E-value=1.9  Score=34.67  Aligned_cols=25  Identities=24%  Similarity=0.424  Sum_probs=19.8

Q ss_pred             CccccccCceecchhhHhhhhccHH
Q psy7022           3 GYYCNVCDCVVKDSINFLDHINGKK   27 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlngk~   27 (124)
                      .|-|.+|.+.|+-..=+.-||..|.
T Consensus        77 K~~C~lc~KlFkg~eFV~KHI~nKH  101 (214)
T PF04959_consen   77 KWRCPLCGKLFKGPEFVRKHIFNKH  101 (214)
T ss_dssp             EEEE-SSS-EESSHHHHHHHHHHH-
T ss_pred             EECCCCCCcccCChHHHHHHHhhcC
Confidence            5889999999999999999997553

Arsenite is a carcinogenic compound which can act as a comutagen by inhibiting DNA repair. It is also involved in cell cycle progression at S phase. ; PDB: 3AX1_A.

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=81.13  E-value=1.1  Score=23.21  Aligned_cols=20  Identities=25%  Similarity=0.604  Sum_probs=15.6

Q ss_pred             ccccccCceecchhhHhhhhc
Q psy7022           4 YYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         4 fyC~vCd~~fkDs~~~ldHln   24 (124)
                      |-|+.|+-+.. ...+..|+.
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~   20 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLK   20 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHH
Confidence            67999998888 889999985

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=80.42  E-value=1  Score=29.17  Aligned_cols=21  Identities=29%  Similarity=0.708  Sum_probs=15.8

Q ss_pred             ccccccCceecchhhHhhhhc
Q psy7022           4 YYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         4 fyC~vCd~~fkDs~~~ldHln   24 (124)
                      --|++|+.++..+-++-.|+-
T Consensus        25 atCP~C~a~~~~srnLrRHle   45 (54)
T PF09237_consen   25 ATCPICGAVIRQSRNLRRHLE   45 (54)
T ss_dssp             EE-TTT--EESSHHHHHHHHH
T ss_pred             CCCCcchhhccchhhHHHHHH
Confidence            359999999999999999983

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	124
3lvg_D	190	LCB, clathrin light chain B; SELF assembly, coated	5e-04

>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190

 Score = 37.1 bits (85), Expect = 5e-04
 Identities = 8/52 (15%), Positives = 27/52 (51%), Gaps = 2/52 (3%)

Query: 54  KKKYEQKKKDYDIEQRMRELKEEEEKLKE--YRRERRKEKKRKLDDGEEEEE 103
           +++   ++ D   +   +E +E+ +K  E   +R+  + +K K+++   ++ 
Sbjct: 93  EQRKRLQELDAASKVMEQEWREKAKKDLEEWNQRQSEQVEKNKINNRIADKA 144

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	124
3cw1_L	77	U1 small nuclear ribonucleoprotein C; PRE-mRNA spl	98.65
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	98.09
4dgw_A	402	PRE-mRNA-splicing factor PRP9; zinc finger; 3.11A	97.94
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	97.51
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	96.12
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	96.07
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	95.99
1ard_A	29	Yeast transcription factor ADR1; transcription reg	95.98
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	95.95
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	95.83
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	95.81
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	95.76
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	95.75
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	95.71
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	95.68
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	94.61
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	94.6
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	95.57
2yrk_A	55	Zinc finger homeobox protein 4; structure genomics	95.55
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	95.51
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	95.51
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	95.47
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	95.39
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	95.35
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	95.32
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	95.32
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	94.27
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	95.26
3eph_A	409	TRNA isopentenyltransferase; transferase, alternat	95.26
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	95.25
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	95.21
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	95.16
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	95.16
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	95.11
1paa_A	30	Yeast transcription factor ADR1; transcription reg	95.0
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	94.93
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	94.93
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	94.92
4f9c_B	144	Protein DBF4 homolog A; Ser/Thr protein kinase, tr	94.91
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	94.86
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	94.85
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	94.85
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	94.83
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	94.82
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	94.82
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	94.79
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	94.78
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	94.76
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	94.75
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	94.75
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	94.74
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	94.68
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	94.66
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	94.65
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	94.65
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	94.64
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	94.64
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	94.63
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	94.62
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	94.62
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	94.6
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	94.6
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	94.6
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	94.6
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	94.59
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	94.55
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	94.55
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	94.54
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	94.54
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	94.53
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	94.49
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	94.48
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	94.48
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	94.47
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	94.47
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	94.46
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	94.46
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	94.46
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	94.46
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	94.44
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	94.44
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	94.43
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	94.42
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	94.42
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	94.42
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	94.41
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	94.4
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	94.39
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	94.39
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	94.37
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	94.36
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	94.36
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	94.36
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	94.34
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	94.34
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	94.34
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	94.32
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	94.32
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	94.32
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	94.31
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	94.28
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	94.28
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	94.28
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	94.27
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	94.26
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	94.26
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	94.26
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	94.25
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	94.24
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	94.24
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	94.24
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	94.24
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	94.18
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	94.17
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	94.16
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	94.15
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	94.15
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	94.15
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	94.13
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	94.13
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	94.13
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	94.12
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	94.11
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	94.1
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	94.1
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	94.09
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	94.08
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	94.07
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	94.06
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	94.01
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	94.0
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	93.99
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	93.91
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	93.88
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	93.88
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	93.83
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	93.82
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	93.79
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	93.78
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	93.78
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	93.74
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	93.74
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	93.68
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	93.67
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	93.66
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	93.4
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	93.37
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	93.34
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	93.34
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	93.1
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	93.1
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	93.08
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	93.05
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	93.04
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	93.02
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	93.01
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	92.96
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	92.93
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	92.91
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	92.88
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	92.86
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	92.83
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	92.71
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	92.64
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	92.62
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	92.59
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	92.57
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	92.28
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	92.2
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	92.16
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	92.09
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	92.08
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	91.91
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	91.82
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	91.73
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	91.68
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	91.68
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	91.55
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	91.5
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	91.47
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	91.41
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	91.35
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	91.28
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	90.91
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	90.87
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	90.86
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	90.4
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	90.35
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	90.16
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	90.07
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	89.96
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	89.78
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	89.54
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	89.27
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	89.21
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	89.14
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	89.14
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	88.96
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	88.74
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	88.72
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	88.4
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	88.25
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	88.15
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	88.03
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	87.77
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	87.66
2epa_A	72	Krueppel-like factor 10; transforming growth facto	87.47
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	87.18
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	86.95
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	86.91
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	86.84
2epa_A	72	Krueppel-like factor 10; transforming growth facto	86.34
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	86.25
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	85.8
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	85.6
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	85.35
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	85.3
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	85.27
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	85.04
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	85.0
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	83.8
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	83.21
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	82.78
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	82.32
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	82.16
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	81.42

>3cw1_L U1 small nuclear ribonucleoprotein C; PRE-mRNA splicing, spliceosome, RNA-binding domain, SM fold, finger, RNA recognition motif, 5' splice site; 5.49A {Homo sapiens} PDB: 1uw2_A 2vrd_A

Probab=98.65  E-value=9.9e-09  Score=69.52  Aligned_cols=32  Identities=38%  Similarity=0.782  Sum_probs=28.6

Q ss_pred             CCCccccccCcee-cchhh-HhhhhccHHHHHHh
Q psy7022           1 MLGYYCNVCDCVV-KDSIN-FLDHINGKKHQRNL   32 (124)
Q Consensus         1 ~~gfyC~vCd~~f-kDs~~-~ldHlngk~H~~~~   32 (124)
                      +++|||++||++| .||.+ +..|++|.+|+.|+
T Consensus         1 mPkYyCdYCd~~lt~Ds~s~Rk~H~~G~kH~~nv   34 (77)
T 3cw1_L            1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENV   34 (77)
T ss_pred             CCCcccccCCceecCCCHHHHHHHHccHHHHHHH
Confidence            5799999999999 78776 99999999999854

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=98.09  E-value=1.1e-06  Score=63.92  Aligned_cols=31  Identities=29%  Similarity=0.405  Sum_probs=28.6

Q ss_pred             CCccccccCceecchhhHhhhhccHHHHHHh
Q psy7022           2 LGYYCNVCDCVVKDSINFLDHINGKKHQRNL   32 (124)
Q Consensus         2 ~gfyC~vCd~~fkDs~~~ldHlngk~H~~~~   32 (124)
                      +-|||.+|+++|.++.+|..|++++.|.+++
T Consensus        49 kpfyC~~C~K~F~~~~~L~~H~rsK~HKrrv   79 (124)
T 1zr9_A           49 GLHRCLACARYFIDSTNLKTHFRSKDHKKRL   79 (124)
T ss_dssp             GCSEETTTTEECSSHHHHHHHTTCHHHHHHH
T ss_pred             cceEcccCcchhCCHHHHHHHHhhhhhhHHH
Confidence            3699999999999999999999999998854

>4dgw_A PRE-mRNA-splicing factor PRP9; zinc finger; 3.11A {Saccharomyces cerevisiae}

Probab=97.94  E-value=1.3e-05  Score=67.94  Aligned_cols=31  Identities=39%  Similarity=0.658  Sum_probs=29.3

Q ss_pred             CCccccccCceecchhhHhhhhccHHHHHHh
Q psy7022           2 LGYYCNVCDCVVKDSINFLDHINGKKHQRNL   32 (124)
Q Consensus         2 ~gfyC~vCd~~fkDs~~~ldHlngk~H~~~~   32 (124)
                      .|+||..|+++|+...+|..||+|++|.++.
T Consensus       291 ~~l~C~~c~K~Fs~~~v~~~hL~GKkh~K~~  321 (402)
T 4dgw_A          291 KGIYCPFCSRWFKTSSVFESHLVGKIHKKNE  321 (402)
T ss_dssp             TEECBTTTTBCBSSHHHHHTTSSSHHHHHHH
T ss_pred             cCeeehhhhhhhccccccHHHhcccccchhH
Confidence            5899999999999999999999999999974

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=97.51  E-value=3.4e-05  Score=55.06  Aligned_cols=30  Identities=27%  Similarity=0.543  Sum_probs=28.0

Q ss_pred             CccccccCceecchhhHhhhhccHHHHHHh
Q psy7022           3 GYYCNVCDCVVKDSINFLDHINGKKHQRNL   32 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlngk~H~~~~   32 (124)
                      -+||.+|+.+|.+..++..|.+|+.|..++
T Consensus        32 ~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v   61 (127)
T 1zu1_A           32 DTQCKVCSAVLISESQKLAHYQSRKHANKV   61 (127)
T ss_dssp             SSEETTTTEECCSHHHHHHHHHCHHHHHHH
T ss_pred             CCcCcCCCCEeCCHHHHHHHHCcHHHHHHH
Confidence            489999999999999999999999998874

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=96.12  E-value=0.0021  Score=37.60  Aligned_cols=22  Identities=27%  Similarity=0.638  Sum_probs=20.0

Q ss_pred             CCccccccCceecchhhHhhhh
Q psy7022           2 LGYYCNVCDCVVKDSINFLDHI   23 (124)
Q Consensus         2 ~gfyC~vCd~~fkDs~~~ldHl   23 (124)
                      ..+||..||++|..-.+|+.|-
T Consensus         7 ~~~~C~~C~IsF~~l~ty~aHK   28 (36)
T 1fu9_A            7 MKKYCSTCDISFNYVKTYLAHK   28 (36)
T ss_dssp             CCSEETTTTEECSSHHHHHHHH
T ss_pred             CcCeeccccceehhhHHHhhhh
Confidence            4799999999999999999884

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=96.07  E-value=0.0024  Score=31.65  Aligned_cols=23  Identities=22%  Similarity=0.550  Sum_probs=20.6

Q ss_pred             CCccccccCceecchhhHhhhhc
Q psy7022           2 LGYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         2 ~gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      ..|-|++|++.|.....|..|+.
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~   24 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLE   24 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHH
T ss_pred             cCccCCCCCcccCCHHHHHHHHH
Confidence            35889999999999999999974

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=95.99  E-value=0.0029  Score=30.96  Aligned_cols=21  Identities=19%  Similarity=0.532  Sum_probs=19.5

Q ss_pred             ccccccCceecchhhHhhhhc
Q psy7022           4 YYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         4 fyC~vCd~~fkDs~~~ldHln   24 (124)
                      |-|++|++.|.....|..|+.
T Consensus         2 ~~C~~C~k~f~~~~~l~~H~~   22 (27)
T 1znf_A            2 YKCGLCERSFVEKSALSRHQR   22 (27)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGG
T ss_pred             ccCCCCCCcCCCHHHHHHHHH
Confidence            789999999999999999974

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=95.98  E-value=0.0028  Score=31.37  Aligned_cols=22  Identities=18%  Similarity=0.499  Sum_probs=20.1

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~   23 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYR   23 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CeECCCCCcccCCHHHHHHHHH
Confidence            4889999999999999999974

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=95.95  E-value=0.003  Score=31.21  Aligned_cols=22  Identities=18%  Similarity=0.510  Sum_probs=20.0

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|..+..|..|+.
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~   24 (27)
T 2kvh_A            3 PFSCSLCPQRSRDFSAMTKHLR   24 (27)
T ss_dssp             CEECSSSSCEESSHHHHHHHHH
T ss_pred             CccCCCcChhhCCHHHHHHHHH
Confidence            5889999999999999999973

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=95.83  E-value=0.0041  Score=30.60  Aligned_cols=22  Identities=23%  Similarity=0.363  Sum_probs=20.2

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~   23 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLR   23 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHH
T ss_pred             CccCCCCCCccCChhHHHHHHH
Confidence            5889999999999999999974

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=95.81  E-value=0.0035  Score=31.05  Aligned_cols=23  Identities=22%  Similarity=0.202  Sum_probs=20.6

Q ss_pred             CccccccCceecchhhHhhhhcc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHING   25 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlng   25 (124)
                      .|-|++|++.|.....|..|+..
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~   24 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILL   24 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTG
T ss_pred             CccCCCCCchhCCHHHHHHHHHH
Confidence            47899999999999999999853

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=95.76  E-value=0.0039  Score=30.82  Aligned_cols=22  Identities=23%  Similarity=0.397  Sum_probs=20.1

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~   24 (28)
T 2kvf_A            3 PYSCSVCGKRFSLKHQMETHYR   24 (28)
T ss_dssp             SEECSSSCCEESCHHHHHHHHT
T ss_pred             CccCCCCCcccCCHHHHHHHHH
Confidence            5889999999999999999974

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=95.75  E-value=0.0038  Score=32.38  Aligned_cols=22  Identities=36%  Similarity=0.686  Sum_probs=20.2

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|..+..|..|+.
T Consensus         7 ~~~C~~C~k~f~~~~~L~~H~~   28 (35)
T 2elx_A            7 GYVCALCLKKFVSSIRLRSHIR   28 (35)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CeECCCCcchhCCHHHHHHHHH
Confidence            5899999999999999999974

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=95.71  E-value=0.0038  Score=31.11  Aligned_cols=22  Identities=18%  Similarity=0.480  Sum_probs=20.1

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....+..|+.
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~   24 (27)
T 2kvg_A            3 PYRCPLCRAGCPSLASMQAHMR   24 (27)
T ss_dssp             TEEETTTTEEESCHHHHHHHHT
T ss_pred             CcCCCCCCcccCCHHHHHHHHH
Confidence            5889999999999999999974

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=95.68  E-value=0.0039  Score=30.80  Aligned_cols=22  Identities=36%  Similarity=0.693  Sum_probs=20.0

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      -|-|++|++.|.....|..|+.
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~   23 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIK   23 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHH
T ss_pred             CccCCCCCCccCCHHHHHHHHH
Confidence            4789999999999999999974

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=94.61  E-value=0.002  Score=32.24  Aligned_cols=22  Identities=14%  Similarity=0.474  Sum_probs=20.0

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~   23 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVR   23 (29)
Confidence            4889999999999999999974

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=94.60  E-value=0.002  Score=31.60  Aligned_cols=22  Identities=27%  Similarity=0.546  Sum_probs=19.9

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|..+..|..|+.
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~   23 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIR   23 (26)
Confidence            4789999999999999999975

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=95.57  E-value=0.0048  Score=32.59  Aligned_cols=22  Identities=23%  Similarity=0.353  Sum_probs=20.1

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        11 ~~~C~~C~k~f~~~~~l~~H~~   32 (37)
T 1p7a_A           11 PFQCPDCDRSFSRSDHLALHRK   32 (37)
T ss_dssp             SBCCTTTCCCBSSHHHHHHHHG
T ss_pred             CccCCCCCcccCcHHHHHHHHH
Confidence            5899999999999999999974

>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4

Probab=95.55  E-value=0.005  Score=39.08  Aligned_cols=29  Identities=24%  Similarity=0.485  Sum_probs=26.5

Q ss_pred             ccccccCceecchhhHhhhhccHHHHHHh
Q psy7022           4 YYCNVCDCVVKDSINFLDHINGKKHQRNL   32 (124)
Q Consensus         4 fyC~vCd~~fkDs~~~ldHlngk~H~~~~   32 (124)
                      --|.+||..|....+.-|||=+++|+..+
T Consensus        14 ~eC~lC~vkYs~r~slqDHIFs~qHI~~v   42 (55)
T 2yrk_A           14 PECTLCGVKYSARLSIRDHIFSKQHISKV   42 (55)
T ss_dssp             SCCTTTTCCCCSSSCHHHHHTSHHHHHHH
T ss_pred             ccccccCcccccccchhhhhccHHHHHHH
Confidence            36999999999999999999999998754

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.51  E-value=0.0053  Score=32.31  Aligned_cols=23  Identities=22%  Similarity=0.466  Sum_probs=20.6

Q ss_pred             CccccccCceecchhhHhhhhcc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHING   25 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlng   25 (124)
                      .|-|++|++.|.....|..|+..
T Consensus         9 ~~~C~~C~k~f~~~~~l~~H~~~   31 (36)
T 2elv_A            9 LYDCHICERKFKNELDRDRHMLV   31 (36)
T ss_dssp             CEECSSSCCEESSHHHHHHHHTT
T ss_pred             CeECCCCCCccCCHHHHHHHHHH
Confidence            58899999999999999999753

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.51  E-value=0.0052  Score=32.32  Aligned_cols=22  Identities=23%  Similarity=0.472  Sum_probs=20.2

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus         9 ~~~C~~C~k~f~~~~~l~~H~~   30 (36)
T 2els_A            9 IFTCEYCNKVFKFKHSLQAHLR   30 (36)
T ss_dssp             CEECTTTCCEESSHHHHHHHHH
T ss_pred             CEECCCCCceeCCHHHHHHHHH
Confidence            5889999999999999999974

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=95.47  E-value=0.0051  Score=30.12  Aligned_cols=22  Identities=23%  Similarity=0.372  Sum_probs=20.0

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~   23 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLK   23 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHH
T ss_pred             CCcCCCCCcccCCHHHHHHHHH
Confidence            4789999999999999999974

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=95.39  E-value=0.0056  Score=32.14  Aligned_cols=22  Identities=23%  Similarity=0.386  Sum_probs=20.1

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      -|-|++|++.|..+..|..|+.
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~~   23 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHIT   23 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHH
T ss_pred             cccCCCCCchhCCHHHHHHHHH
Confidence            4789999999999999999985

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=95.35  E-value=0.0065  Score=31.64  Aligned_cols=22  Identities=18%  Similarity=0.540  Sum_probs=20.3

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|.+|++.|.....|..|+.
T Consensus         7 ~~~C~~C~k~f~~~~~l~~H~~   28 (35)
T 1srk_A            7 PFVCRICLSAFTTKANCARHLK   28 (35)
T ss_dssp             CEECSSSCCEESSHHHHHHHHG
T ss_pred             CeeCCCCCcccCCHHHHHHHHH
Confidence            5889999999999999999975

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.32  E-value=0.0068  Score=31.87  Aligned_cols=22  Identities=23%  Similarity=0.706  Sum_probs=20.1

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus         9 ~~~C~~C~k~f~~~~~l~~H~~   30 (36)
T 2elq_A            9 PFKCSLCEYATRSKSNLKAHMN   30 (36)
T ss_dssp             SEECSSSSCEESCHHHHHHHHH
T ss_pred             CccCCCCCchhCCHHHHHHHHH
Confidence            5889999999999999999974

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.32  E-value=0.0058  Score=32.23  Aligned_cols=22  Identities=27%  Similarity=0.590  Sum_probs=20.3

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus         9 ~~~C~~C~k~f~~~~~l~~H~~   30 (37)
T 2elo_A            9 SYSCPVCEKSFSEDRLIKSHIK   30 (37)
T ss_dssp             CCEETTTTEECSSHHHHHHHHH
T ss_pred             CcCCCCCCCccCCHHHHHHHHH
Confidence            4889999999999999999975

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=94.27  E-value=0.0031  Score=31.43  Aligned_cols=22  Identities=23%  Similarity=0.455  Sum_probs=20.2

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~   24 (30)
T 2lvr_A            3 PYVCIHCQRQFADPGALQRHVR   24 (30)
Confidence            4889999999999999999975

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.26  E-value=0.0073  Score=31.54  Aligned_cols=22  Identities=23%  Similarity=0.424  Sum_probs=20.2

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus         9 ~~~C~~C~k~f~~~~~l~~H~~   30 (36)
T 2elt_A            9 PYKCPQCSYASAIKANLNVHLR   30 (36)
T ss_dssp             SEECSSSSCEESSHHHHHHHHH
T ss_pred             CCCCCCCCcccCCHHHHHHHHH
Confidence            5889999999999999999974

>3eph_A TRNA isopentenyltransferase; transferase, alternative initiation, ATP-binding, cytoplasm, mitochondrion, nucleotide-binding, nucleus; 2.95A {Saccharomyces cerevisiae} PDB: 3epj_A 3epk_A* 3epl_A*

Probab=95.26  E-value=0.0063  Score=51.46  Aligned_cols=29  Identities=34%  Similarity=0.690  Sum_probs=26.8

Q ss_pred             ccccccCc------eecchhhHhhhhccHHHHHHh
Q psy7022           4 YYCNVCDC------VVKDSINFLDHINGKKHQRNL   32 (124)
Q Consensus         4 fyC~vCd~------~fkDs~~~ldHlngk~H~~~~   32 (124)
                      |+|++|+.      ++-...+|.-||+|+.|.+++
T Consensus       361 ~~Ce~C~~~~~~~~~~~ge~~W~~H~ksr~Hk~~~  395 (409)
T 3eph_A          361 YTCNVCRNADGKNVVAIGEKYWKIHLGSRRHKSNL  395 (409)
T ss_dssp             EEEEEEECTTSCEEEEESHHHHHHHHTSHHHHHHH
T ss_pred             eeCCCCCCCCCCcceEEcHHHHHHHhhhhHHHHHH
Confidence            78999998      899999999999999999854

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.25  E-value=0.0072  Score=31.57  Aligned_cols=22  Identities=18%  Similarity=0.309  Sum_probs=20.1

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      -|-|++|++.|.....|..|+.
T Consensus         9 ~~~C~~C~k~f~~~~~l~~H~~   30 (36)
T 2elr_A            9 THLCDMCGKKFKSKGTLKSHKL   30 (36)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CeecCcCCCCcCchHHHHHHHH
Confidence            5889999999999999999974

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.21  E-value=0.0075  Score=32.25  Aligned_cols=20  Identities=25%  Similarity=0.509  Sum_probs=18.8

Q ss_pred             CccccccCceecchhhHhhh
Q psy7022           3 GYYCNVCDCVVKDSINFLDH   22 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldH   22 (124)
                      .|-|+.|++.|.....|..|
T Consensus         9 ~~~C~~C~k~f~~~~~L~~H   28 (37)
T 2elm_A            9 LYYCSQCHYSSITKNCLKRH   28 (37)
T ss_dssp             EEECSSSSCEEECHHHHHHH
T ss_pred             CeECCCCCcccCCHHHHHHH
Confidence            48899999999999999999

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=95.16  E-value=0.0075  Score=34.57  Aligned_cols=22  Identities=23%  Similarity=0.480  Sum_probs=20.3

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|.|.+|++.|.....|..|+.
T Consensus         7 p~~C~~C~k~F~~~~~L~~H~~   28 (48)
T 3iuf_A            7 PYACDICGKRYKNRPGLSYHYA   28 (48)
T ss_dssp             CEECTTTCCEESSHHHHHHHHH
T ss_pred             CEECCCcCcccCCHHHHHHHhh
Confidence            5899999999999999999975

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.16  E-value=0.0078  Score=31.79  Aligned_cols=22  Identities=23%  Similarity=0.440  Sum_probs=20.0

Q ss_pred             CccccccCceecch-hhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDS-INFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs-~~~ldHln   24 (124)
                      .|-|++|++.|... ..|..|+.
T Consensus         9 ~~~C~~C~k~f~~~~~~L~~H~~   31 (37)
T 2elp_A            9 AMKCPYCDFYFMKNGSDLQRHIW   31 (37)
T ss_dssp             CEECSSSSCEECSSCHHHHHHHH
T ss_pred             CeECCCCChhhccCHHHHHHHHH
Confidence            58899999999999 99999974

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=95.11  E-value=0.0072  Score=34.22  Aligned_cols=21  Identities=14%  Similarity=0.382  Sum_probs=19.9

Q ss_pred             CccccccCceecchhhHhhhh
Q psy7022           3 GYYCNVCDCVVKDSINFLDHI   23 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHl   23 (124)
                      .|.|++|+++|.....|..|.
T Consensus         8 p~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            8 RFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CCEETTTTEECSCHHHHHHHH
T ss_pred             CeECCCCCCccCCHhHccCcC
Confidence            589999999999999999997

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=95.00  E-value=0.0093  Score=29.65  Aligned_cols=21  Identities=19%  Similarity=0.540  Sum_probs=19.2

Q ss_pred             CccccccCceecchhhHhhhh
Q psy7022           3 GYYCNVCDCVVKDSINFLDHI   23 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHl   23 (124)
                      .|-|+.|++.|.....|..|+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~   22 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHA   22 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHH
T ss_pred             CcCCcccCcccCChHHHHHHH
Confidence            488999999999999999994

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.93  E-value=0.0098  Score=33.01  Aligned_cols=22  Identities=23%  Similarity=0.557  Sum_probs=20.3

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~   33 (46)
T 2em3_A           12 PYECKVCSKAFTQKAHLAQHQK   33 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CeECCCCCcccCCHHHHHHHHH
Confidence            5889999999999999999984

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.93  E-value=0.0099  Score=32.16  Aligned_cols=22  Identities=23%  Similarity=0.539  Sum_probs=20.2

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|..+..|..|+.
T Consensus        10 ~~~C~~C~k~f~~~~~L~~H~~   31 (42)
T 2yte_A           10 PYSCAECKETFSDNNRLVQHQK   31 (42)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CeECCCCCCccCCHHHHHHHHH
Confidence            5889999999999999999974

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.92  E-value=0.0099  Score=32.48  Aligned_cols=22  Identities=27%  Similarity=0.545  Sum_probs=20.2

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~   33 (44)
T 2eof_A           12 PYECNECQKAFNTKSNLMVHQR   33 (44)
T ss_dssp             SEECTTTCCEESCHHHHHHHHH
T ss_pred             CeECCCCCcccCCHhHHHHHHH
Confidence            5889999999999999999984

>4f9c_B Protein DBF4 homolog A; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_B* 4f9b_B* 4f9a_B*

Probab=94.91  E-value=0.008  Score=44.19  Aligned_cols=39  Identities=21%  Similarity=0.430  Sum_probs=28.5

Q ss_pred             cccccCceecchhhHhhhhccHHHHHHhccccccccccHHHHHHH
Q psy7022           5 YCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSSLDQVKKR   49 (124)
Q Consensus         5 yC~vCd~~fkDs~~~ldHlngk~H~~~~G~s~~ver~tle~V~~r   49 (124)
                      ||++|...|.|   |..||.|.+|..-+ .+.+.  .-||.+-++
T Consensus        89 yCE~C~~~y~~---l~~H~~s~~Hr~fa-~~~n~--~~lD~li~~  127 (144)
T 4f9c_B           89 YCECCLQKYED---LETHLLSEQHRNFA-QSNQY--QVVDDIVSK  127 (144)
T ss_dssp             EETTTTEECSC---HHHHHHSHHHHHHH-TSSTT--HHHHHHHTT
T ss_pred             Cccchhhhhhh---HHHHcCCHHHHHHH-hcccH--HHHHHHHHH
Confidence            99999999997   77999999998755 44443  235555443

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=94.86  E-value=0.011  Score=32.12  Aligned_cols=22  Identities=18%  Similarity=0.459  Sum_probs=20.2

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        10 ~~~C~~C~k~f~~~~~L~~H~~   31 (42)
T 2el5_A           10 PYECSECGKAFNRKDQLISHQR   31 (42)
T ss_dssp             SEECSSSCCEESSHHHHHHHHG
T ss_pred             CccCCCcChhhCCHHHHHHHHH
Confidence            4889999999999999999985

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.85  E-value=0.011  Score=32.78  Aligned_cols=23  Identities=17%  Similarity=0.257  Sum_probs=20.8

Q ss_pred             CccccccCceecchhhHhhhhcc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHING   25 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlng   25 (124)
                      .|-|++|++.|.....|..|+..
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~   34 (46)
T 2emi_A           12 HYECSECGKAFIQKSTLSMHQRI   34 (46)
T ss_dssp             CEECSSSCCEESSHHHHHHHHGG
T ss_pred             CCCCCCCCcccCCHHHHHHHHhH
Confidence            58999999999999999999853

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=94.85  E-value=0.011  Score=32.00  Aligned_cols=22  Identities=18%  Similarity=0.365  Sum_probs=20.1

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        11 ~~~C~~C~k~f~~~~~l~~H~~   32 (42)
T 2epc_A           11 PYLCGQCGKSFTQRGSLAVHQR   32 (42)
T ss_dssp             CEECSSSCCEESSHHHHHHHHH
T ss_pred             CeECCCCCcccCCHHHHHHHhh
Confidence            5889999999999999999974

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.83  E-value=0.011  Score=33.00  Aligned_cols=23  Identities=26%  Similarity=0.525  Sum_probs=20.9

Q ss_pred             CccccccCceecchhhHhhhhcc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHING   25 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlng   25 (124)
                      .|-|++|++.|.....|..|+..
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2eon_A           12 PYKCQVCGKAFRVSSHLVQHHSV   34 (46)
T ss_dssp             SCBCSSSCCBCSSHHHHHHHTTT
T ss_pred             ccCCCCCCcccCcHHHHHHHHHh
Confidence            58899999999999999999853

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=94.82  E-value=0.011  Score=32.97  Aligned_cols=22  Identities=23%  Similarity=0.409  Sum_probs=20.3

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|..+..|..|+.
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2eoy_A           12 CFKCNKCEKTFSCSKYLTQHER   33 (46)
T ss_dssp             CEECSSSCCEESSSHHHHHHHT
T ss_pred             CEECcCCCCcCCCHHHHHHHHH
Confidence            5889999999999999999984

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.82  E-value=0.011  Score=32.76  Aligned_cols=23  Identities=22%  Similarity=0.447  Sum_probs=20.8

Q ss_pred             CccccccCceecchhhHhhhhcc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHING   25 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlng   25 (124)
                      .|-|++|++.|.....|..|+..
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2emg_A           12 PFICSECGKVFTHKTNLIIHQKI   34 (46)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHTT
T ss_pred             CEECCccCcccCCHHHHHHHHHH
Confidence            48899999999999999999853

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.79  E-value=0.011  Score=32.64  Aligned_cols=22  Identities=23%  Similarity=0.296  Sum_probs=20.3

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~   33 (44)
T 2epv_A           12 PYECNECGKAFIWKSLLIVHER   33 (44)
T ss_dssp             SEECSSSCCEESSHHHHHHHHG
T ss_pred             CeECCCCCcccCchHHHHHHHh
Confidence            5889999999999999999975

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.78  E-value=0.012  Score=31.87  Aligned_cols=22  Identities=23%  Similarity=0.536  Sum_probs=20.4

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        11 ~~~C~~C~k~f~~~~~L~~H~~   32 (42)
T 2ytb_A           11 PYRCDQCGKAFSQKGSLIVHIR   32 (42)
T ss_dssp             SBCCTTTTCCBSSHHHHHTTGG
T ss_pred             CeeCCCccchhCCHHHHHHHHH
Confidence            5889999999999999999985

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=94.76  E-value=0.012  Score=31.63  Aligned_cols=22  Identities=23%  Similarity=0.590  Sum_probs=20.2

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus         6 ~~~C~~C~k~f~~~~~L~~H~~   27 (39)
T 1njq_A            6 SYTCSFCKREFRSAQALGGHMN   27 (39)
T ss_dssp             SEECTTTCCEESSHHHHHHHHH
T ss_pred             ceECCCCCcccCCHHHHHHHHH
Confidence            5889999999999999999975

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.75  E-value=0.011  Score=32.74  Aligned_cols=22  Identities=18%  Similarity=0.475  Sum_probs=20.3

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~   33 (46)
T 2en3_A           12 PFQCKECGMNFSWSCSLFKHLR   33 (46)
T ss_dssp             SEECSSSCCEESSSHHHHHHHH
T ss_pred             CeeCcccChhhCCHHHHHHHHH
Confidence            4889999999999999999984

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.75  E-value=0.011  Score=32.74  Aligned_cols=22  Identities=23%  Similarity=0.505  Sum_probs=20.4

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2eq2_A           12 PYQCNECGKAFSQTSKLARHQR   33 (46)
T ss_dssp             SSSCCSSCCCCSSHHHHHHHGG
T ss_pred             CeECCCCCcccCCHHHHHHHHH
Confidence            5889999999999999999985

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=94.74  E-value=0.012  Score=32.03  Aligned_cols=22  Identities=18%  Similarity=0.560  Sum_probs=20.4

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        11 ~~~C~~C~k~f~~~~~L~~H~~   32 (42)
T 2eos_A           11 PYPCEICGTRFRHLQTLKSHLR   32 (42)
T ss_dssp             CBCCSSSCCCBSSHHHHHHHTT
T ss_pred             CEECCCCCCccCCHHHHHHHHH
Confidence            5889999999999999999985

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=94.68  E-value=0.014  Score=31.57  Aligned_cols=22  Identities=18%  Similarity=0.311  Sum_probs=20.2

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        10 ~~~C~~C~k~f~~~~~L~~H~~   31 (41)
T 2ept_A           10 VYECQECGKSFRQKGSLTLHER   31 (41)
T ss_dssp             CEECSSSCCEESSHHHHHHHGG
T ss_pred             CeECCCCCCCcCCHHHHHHHHH
Confidence            5889999999999999999975

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.66  E-value=0.011  Score=32.36  Aligned_cols=23  Identities=22%  Similarity=0.414  Sum_probs=20.7

Q ss_pred             CccccccCceecchhhHhhhhcc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHING   25 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlng   25 (124)
                      .|-|++|++.|.....|..|+..
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~   34 (44)
T 2eoj_A           12 PYECCECGKVFSRKDQLVSHQKT   34 (44)
T ss_dssp             SCEETTTTEECSSHHHHHHHHTT
T ss_pred             CeeCCCCCCccCCHHHHHHHHHH
Confidence            58899999999999999999853

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=94.65  E-value=0.013  Score=32.59  Aligned_cols=22  Identities=18%  Similarity=0.314  Sum_probs=20.3

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~   33 (46)
T 2emj_A           12 PFECAECGKSFSISSQLATHQR   33 (46)
T ss_dssp             SEECSSSSCEESSHHHHHHHHH
T ss_pred             CEECCCCCcccCCHHHHHHHHH
Confidence            5889999999999999999974

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.65  E-value=0.013  Score=32.44  Aligned_cols=22  Identities=18%  Similarity=0.448  Sum_probs=20.3

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2eor_A           12 PYNCEECGKAFIHDSQLQEHQR   33 (46)
T ss_dssp             SEECTTTCCEESSHHHHHHHHH
T ss_pred             CccCCCCCCCcCCHHHHHHHHH
Confidence            4889999999999999999975

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.64  E-value=0.012  Score=32.14  Aligned_cols=23  Identities=22%  Similarity=0.482  Sum_probs=20.8

Q ss_pred             CccccccCceecchhhHhhhhcc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHING   25 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlng   25 (124)
                      .|-|++|++.|.....|..|+..
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~   34 (44)
T 2en7_A           12 PYVCNECGKAFRSKSYLIIHTRT   34 (44)
T ss_dssp             SSCCTTTCCCCSSHHHHHHHHTT
T ss_pred             CeECCCCCCccCCHHHHHHHhhh
Confidence            58999999999999999999853

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.64  E-value=0.012  Score=32.46  Aligned_cols=23  Identities=17%  Similarity=0.225  Sum_probs=20.9

Q ss_pred             CccccccCceecchhhHhhhhcc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHING   25 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlng   25 (124)
                      .|-|++|++.|.....|..|+..
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2ep1_A           12 PYECSDCGKSFIKKSQLHVHQRI   34 (46)
T ss_dssp             SSCCSSSCCCCSSHHHHHHHHGG
T ss_pred             CcCCCCCCchhCCHHHHHHHHHH
Confidence            58899999999999999999854

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.63  E-value=0.012  Score=32.76  Aligned_cols=22  Identities=32%  Similarity=0.575  Sum_probs=20.3

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2eoz_A           12 PYSCNVCGKAFVLSAHLNQHLR   33 (46)
T ss_dssp             SEEETTTTEEESSHHHHHHHHH
T ss_pred             CeECcccChhhCCHHHHHHHHH
Confidence            5889999999999999999974

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.62  E-value=0.013  Score=32.37  Aligned_cols=22  Identities=23%  Similarity=0.501  Sum_probs=20.4

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2yrj_A           12 PYRCGECGKAFAQKANLTQHQR   33 (46)
T ss_dssp             CEECSSSCCEESSHHHHHHHHT
T ss_pred             CeECCCCCCccCCHHHHHHHHH
Confidence            5889999999999999999985

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=94.62  E-value=0.013  Score=32.18  Aligned_cols=22  Identities=23%  Similarity=0.523  Sum_probs=20.2

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~   33 (44)
T 2yu5_A           12 PFKCSKCDRVFTQRNYLVQHER   33 (44)
T ss_dssp             SEECSSSSCEESSSHHHHHHHH
T ss_pred             CeECCCCCchhCCHHHHHHHhH
Confidence            5889999999999999999974

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=94.60  E-value=0.014  Score=32.04  Aligned_cols=22  Identities=18%  Similarity=0.517  Sum_probs=20.4

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~   33 (44)
T 2emb_A           12 RYECSKCQATFNLRKHLIQHQK   33 (44)
T ss_dssp             SEECTTTCCEESCHHHHHHHGG
T ss_pred             CeECCCCCCccCCHHHHHHHHH
Confidence            5889999999999999999985

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.60  E-value=0.012  Score=32.37  Aligned_cols=22  Identities=23%  Similarity=0.526  Sum_probs=20.3

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~   33 (44)
T 2eox_A           12 SYNCNECGKAFTRIFHLTRHQK   33 (44)
T ss_dssp             CEEETTTTEEESSSHHHHTTHH
T ss_pred             CeECcccCcccCCHHHHHHHHH
Confidence            4889999999999999999984

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.60  E-value=0.014  Score=32.43  Aligned_cols=22  Identities=23%  Similarity=0.540  Sum_probs=20.4

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~   33 (46)
T 2enh_A           12 PYECDVCRKAFSHHASLTQHQR   33 (46)
T ss_dssp             SCBCTTTCCBCSSSHHHHHHGG
T ss_pred             CcCCCCcCchhCCHHHHHHHHH
Confidence            5889999999999999999985

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=94.60  E-value=0.012  Score=32.38  Aligned_cols=22  Identities=18%  Similarity=0.431  Sum_probs=20.2

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~   33 (44)
T 2eou_A           12 TSECQECGKIFRHSSLLIEHQA   33 (44)
T ss_dssp             CCCCTTTCCCCSSHHHHHHHHH
T ss_pred             CeECCCCCcccCCHHHHHHHHH
Confidence            5889999999999999999974

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.59  E-value=0.013  Score=32.41  Aligned_cols=22  Identities=27%  Similarity=0.579  Sum_probs=20.4

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2ep3_A           12 PYRCAECGKAFTDRSNLFTHQK   33 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHHT
T ss_pred             CeECCCCCchhCCHHHHHHHHH
Confidence            4889999999999999999985

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.55  E-value=0.015  Score=32.16  Aligned_cols=22  Identities=23%  Similarity=0.421  Sum_probs=20.4

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2yts_A           12 PYICNECGKSFIQKSHLNRHRR   33 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHGG
T ss_pred             CEECCCCChhhCChHHHHHHHH
Confidence            5889999999999999999985

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.55  E-value=0.014  Score=32.38  Aligned_cols=22  Identities=27%  Similarity=0.534  Sum_probs=20.3

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2em6_A           12 CYKCDVCGKEFSQSSHLQTHQR   33 (46)
T ss_dssp             CCBCSSSCCBCSSHHHHHHHHT
T ss_pred             CeECCCCCcccCCHHHHHHHHH
Confidence            5899999999999999999975

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=94.54  E-value=0.013  Score=32.69  Aligned_cols=22  Identities=27%  Similarity=0.570  Sum_probs=20.3

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      -|-|++|++.|.....|..|+.
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~   33 (46)
T 2eom_A           12 GHRCSDCGKFFLQASNFIQHRR   33 (46)
T ss_dssp             SCCCSSSCCCCSSHHHHHHHHH
T ss_pred             CcCCCCCCCeeCChHHHHHHHH
Confidence            5899999999999999999974

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.54  E-value=0.014  Score=31.60  Aligned_cols=22  Identities=18%  Similarity=0.469  Sum_probs=20.3

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        11 ~~~C~~C~k~f~~~~~L~~H~~   32 (42)
T 2en2_A           11 PYKCETCGARFVQVAHLRAHVL   32 (42)
T ss_dssp             SEECTTTCCEESSHHHHHHHTH
T ss_pred             CEeCCCcChhhCCHHHHHHHHH
Confidence            5889999999999999999984

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.53  E-value=0.014  Score=32.32  Aligned_cols=22  Identities=27%  Similarity=0.585  Sum_probs=20.4

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~   33 (46)
T 2enf_A           12 PYKCNECGKVFTQNSHLVRHRG   33 (46)
T ss_dssp             SCBCSSSCCBCSSHHHHHHHHT
T ss_pred             CeECCCCCcccCCHHHHHHHHH
Confidence            5899999999999999999985

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=94.49  E-value=0.015  Score=32.29  Aligned_cols=23  Identities=13%  Similarity=0.131  Sum_probs=20.9

Q ss_pred             CccccccCceecchhhHhhhhcc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHING   25 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlng   25 (124)
                      .|-|++|++.|.....|..|+..
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2em5_A           12 SHQCHECGRGFTLKSHLNQHQRI   34 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHHTT
T ss_pred             CeECCcCCCccCCHHHHHHHHHH
Confidence            58899999999999999999854

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.48  E-value=0.013  Score=32.33  Aligned_cols=23  Identities=22%  Similarity=0.326  Sum_probs=20.7

Q ss_pred             CccccccCceecchhhHhhhhcc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHING   25 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlng   25 (124)
                      .|-|++|++.|.....|..|+..
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2eq3_A           12 PYECNQCGKAFSVRSSLTTHQAI   34 (46)
T ss_dssp             SSEETTTTEECSSHHHHHHHHTT
T ss_pred             CeECCCCChhhCCHHHHHHHHHH
Confidence            58899999999999999999853

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.48  E-value=0.015  Score=32.16  Aligned_cols=22  Identities=23%  Similarity=0.434  Sum_probs=20.3

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2eow_A           12 PYKCNECGKAFRARSSLAIHQA   33 (46)
T ss_dssp             CEECTTSCCEESSHHHHHHHHH
T ss_pred             CeeccccCChhcCHHHHHHHHH
Confidence            4889999999999999999984

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.47  E-value=0.016  Score=32.15  Aligned_cols=22  Identities=14%  Similarity=0.312  Sum_probs=20.4

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~   33 (46)
T 2emf_A           12 HFECTECGKAFTRKSTLSMHQK   33 (46)
T ss_dssp             CEECSSSCCEESCHHHHHHHGG
T ss_pred             CeECCCCCchhCCHHHHHHHHH
Confidence            5889999999999999999985

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=94.47  E-value=0.015  Score=28.52  Aligned_cols=22  Identities=23%  Similarity=0.448  Sum_probs=19.9

Q ss_pred             Ccccc--ccCceecchhhHhhhhc
Q psy7022           3 GYYCN--VCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~--vCd~~fkDs~~~ldHln   24 (124)
                      .|-|+  .|++.|.....|..|+.
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~   25 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKK   25 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHG
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHH
Confidence            47899  99999999999999974

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.46  E-value=0.015  Score=32.12  Aligned_cols=22  Identities=23%  Similarity=0.483  Sum_probs=20.4

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2eme_A           12 PYVCDYCGKAFGLSAELVRHQR   33 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHHG
T ss_pred             CeECCCCChhhCCHHHHHHHHH
Confidence            5889999999999999999985

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.46  E-value=0.015  Score=32.31  Aligned_cols=22  Identities=18%  Similarity=0.338  Sum_probs=20.3

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2yto_A           12 PYKCSDCGKAFTRKSGLHIHQQ   33 (46)
T ss_dssp             CEECSSSCCEESSHHHHHHHHH
T ss_pred             CEECcccCCccCCHhHHHHHHH
Confidence            5889999999999999999984

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=94.46  E-value=0.0052  Score=31.96  Aligned_cols=23  Identities=22%  Similarity=0.388  Sum_probs=20.4

Q ss_pred             CccccccCceecchhhHhhhhcc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHING   25 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlng   25 (124)
                      -|-|++|++.|..+..+..|+..
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~~~   24 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHIKT   24 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSSTTS
T ss_pred             CCCCCCCCcccCCHHHHHHHHHH
Confidence            47899999999999999999853

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.46  E-value=0.015  Score=32.10  Aligned_cols=22  Identities=18%  Similarity=0.460  Sum_probs=20.2

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2ytf_A           12 PFECSECQKAFNTKSNLIVHQR   33 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CcCCCCCCcccCCHHHHHHHHH
Confidence            5889999999999999999974

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.44  E-value=0.015  Score=32.18  Aligned_cols=22  Identities=18%  Similarity=0.433  Sum_probs=20.4

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2ep2_A           12 PYECSICGKSFTKKSQLHVHQQ   33 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CcCCCCCCcccCCHHHHHHHHH
Confidence            5889999999999999999985

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.44  E-value=0.015  Score=32.17  Aligned_cols=23  Identities=17%  Similarity=0.462  Sum_probs=20.8

Q ss_pred             CccccccCceecchhhHhhhhcc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHING   25 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlng   25 (124)
                      .|-|++|++.|.....|..|+..
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~   34 (46)
T 2emy_A           12 PYECHECGKAFSRKYQLISHQRT   34 (46)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHH
T ss_pred             CcCCCCCCcccCcHHHHHHHHHH
Confidence            58899999999999999999853

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.43  E-value=0.015  Score=32.17  Aligned_cols=22  Identities=23%  Similarity=0.487  Sum_probs=20.3

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2ytj_A           12 PYICAECGKAFTIRSNLIKHQK   33 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CeECCCCChhhCCHHHHHHHHH
Confidence            5899999999999999999984

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.42  E-value=0.014  Score=32.40  Aligned_cols=22  Identities=18%  Similarity=0.307  Sum_probs=20.1

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2eoh_A           12 PYECKECRKTFIQIGHLNQHKR   33 (46)
T ss_dssp             SCCCSSSCCCCSSHHHHHHHHH
T ss_pred             CcCCCCcCchhCCHHHHHHHHH
Confidence            5889999999999999999974

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.42  E-value=0.014  Score=32.30  Aligned_cols=22  Identities=27%  Similarity=0.540  Sum_probs=20.3

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~   33 (46)
T 2yti_A           12 PYKCNECGKVFTQNSHLARHRG   33 (46)
T ss_dssp             TTCCSSSCCCCSSHHHHHHHHT
T ss_pred             CeECCCCCcccCChhHHHHHhH
Confidence            5889999999999999999985

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.42  E-value=0.015  Score=32.26  Aligned_cols=22  Identities=23%  Similarity=0.392  Sum_probs=20.4

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~   33 (46)
T 2en9_A           12 LFKCNECKKTFTQSSSLTVHQR   33 (46)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CEECCccCcccCCHHHHHHHHH
Confidence            5889999999999999999975

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.41  E-value=0.016  Score=32.23  Aligned_cols=23  Identities=17%  Similarity=0.335  Sum_probs=20.7

Q ss_pred             CccccccCceecchhhHhhhhcc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHING   25 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlng   25 (124)
                      .|-|++|++.|.....|..|+..
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~   34 (46)
T 2ytp_A           12 HYECSECGKAFARKSTLIMHQRI   34 (46)
T ss_dssp             CEECSSSCCEESSHHHHHHHHTT
T ss_pred             CeECCcCCcccCCHHHHHHHHHH
Confidence            48899999999999999999853

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.40  E-value=0.016  Score=32.01  Aligned_cols=22  Identities=18%  Similarity=0.243  Sum_probs=20.3

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2eov_A           12 PYKCSDCGKSFTWKSRLRIHQK   33 (46)
T ss_dssp             SCBCSSSCCBCSSHHHHHHHHH
T ss_pred             CccCCccChhhCCHHHHHHHHH
Confidence            5899999999999999999974

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=94.39  E-value=0.015  Score=33.65  Aligned_cols=22  Identities=27%  Similarity=0.608  Sum_probs=20.2

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        24 ~~~C~~C~k~f~~~~~L~~H~~   45 (54)
T 1yui_A           24 PATCPICYAVIRQSRNLRRHLE   45 (54)
T ss_dssp             CEECTTTCCEESSHHHHHHHHH
T ss_pred             CccCCCCCcccCCHHHHHHHHH
Confidence            4889999999999999999974

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.39  E-value=0.016  Score=32.07  Aligned_cols=23  Identities=22%  Similarity=0.392  Sum_probs=20.8

Q ss_pred             CccccccCceecchhhHhhhhcc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHING   25 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlng   25 (124)
                      .|-|++|++.|.....|..|+..
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~   34 (46)
T 2eq0_A           12 PYKCHECGKVFRRNSHLARHQLI   34 (46)
T ss_dssp             CEECTTTCCEESSHHHHHHHHTT
T ss_pred             CeECCCCCchhCCHHHHHHHHHH
Confidence            48899999999999999999854

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.37  E-value=0.017  Score=31.99  Aligned_cols=23  Identities=22%  Similarity=0.356  Sum_probs=20.8

Q ss_pred             CccccccCceecchhhHhhhhcc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHING   25 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlng   25 (124)
                      .|-|++|++.|.....|..|+..
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2eml_A           12 PYECSVCGKAFSHRQSLSVHQRI   34 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHHGG
T ss_pred             CeeCCCcCCccCCHHHHHHHHHH
Confidence            58899999999999999999853

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.36  E-value=0.016  Score=31.91  Aligned_cols=22  Identities=27%  Similarity=0.833  Sum_probs=20.3

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        10 ~~~C~~C~k~f~~~~~L~~H~~   31 (43)
T 2yrm_A           10 AFFCNECDCRFSEEASLKRHTL   31 (43)
T ss_dssp             CBCCSSSCCCBSSHHHHHHHHH
T ss_pred             CEECCCCCCeeCChHHHHHHHH
Confidence            4889999999999999999974

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.36  E-value=0.017  Score=32.10  Aligned_cols=23  Identities=13%  Similarity=0.323  Sum_probs=20.7

Q ss_pred             CccccccCceecchhhHhhhhcc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHING   25 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlng   25 (124)
                      .|-|++|++.|.....|..|+..
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2yth_A           12 PFQCEECGKRFTQNSHLHSHQRV   34 (46)
T ss_dssp             SBCCSSSCCCBSSHHHHHHHGGG
T ss_pred             CCCCCCCCcccCCHHHHHHHHHh
Confidence            48899999999999999999853

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.36  E-value=0.017  Score=31.99  Aligned_cols=23  Identities=26%  Similarity=0.437  Sum_probs=20.9

Q ss_pred             CccccccCceecchhhHhhhhcc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHING   25 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlng   25 (124)
                      .|-|++|++.|.....|..|+..
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2ene_A           12 PYKCNECGKVFRHNSYLSRHQRI   34 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHHTT
T ss_pred             CeECCCCCchhCChHHHHHHHhh
Confidence            58899999999999999999853

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.34  E-value=0.015  Score=32.21  Aligned_cols=22  Identities=27%  Similarity=0.505  Sum_probs=20.4

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2eq1_A           12 PYKCNECGKAFRAHSNLTTHQV   33 (46)
T ss_dssp             CCCCTTTTCCCSSHHHHHHHHT
T ss_pred             CeECCcCChhhCCHHHHHHHHH
Confidence            5889999999999999999985

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.34  E-value=0.017  Score=32.13  Aligned_cols=23  Identities=22%  Similarity=0.525  Sum_probs=20.7

Q ss_pred             CccccccCceecchhhHhhhhcc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHING   25 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlng   25 (124)
                      .|-|++|++.|.....|..|+..
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~   34 (46)
T 2eoo_A           12 PYGCNECGKNFGRHSHLIEHLKR   34 (46)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHH
T ss_pred             CEEccccCcccCCHHHHHHHHHH
Confidence            48899999999999999999753

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.34  E-value=0.017  Score=31.89  Aligned_cols=23  Identities=13%  Similarity=0.125  Sum_probs=20.9

Q ss_pred             CccccccCceecchhhHhhhhcc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHING   25 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlng   25 (124)
                      .|-|++|++.|.....|..|+..
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2eop_A           12 PHECRECGKSFSFNSQLIVHQRI   34 (46)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHTT
T ss_pred             CeeCCCCCchhCCHHHHHHHHHH
Confidence            58899999999999999999854

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.32  E-value=0.016  Score=31.99  Aligned_cols=22  Identities=18%  Similarity=0.430  Sum_probs=20.5

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~   33 (47)
T 2epx_A           12 PYECIECGKAFIQNTSLIRHWR   33 (47)
T ss_dssp             SBCCSSSCCCBSSHHHHHHHHT
T ss_pred             CEECCccCchhCChHHHHHHhH
Confidence            5899999999999999999985

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.32  E-value=0.017  Score=32.00  Aligned_cols=23  Identities=22%  Similarity=0.346  Sum_probs=20.8

Q ss_pred             CccccccCceecchhhHhhhhcc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHING   25 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlng   25 (124)
                      .|-|++|++.|.....|..|+..
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2epz_A           12 PFDCIDCGKAFSDHIGLNQHRRI   34 (46)
T ss_dssp             SBCCTTTCCCBSSHHHHHHHHTT
T ss_pred             CeECCCCCceeCCHHHHHHHHHH
Confidence            58899999999999999999853

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.32  E-value=0.017  Score=32.00  Aligned_cols=22  Identities=14%  Similarity=0.454  Sum_probs=20.5

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2ytg_A           12 PFKCGECGKSYNQRVHLTQHQR   33 (46)
T ss_dssp             SEECTTTCCEESSSHHHHTTGG
T ss_pred             CeECCCCCcccCCHHHHHHHHH
Confidence            5899999999999999999985

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.31  E-value=0.016  Score=32.18  Aligned_cols=23  Identities=22%  Similarity=0.390  Sum_probs=20.9

Q ss_pred             CccccccCceecchhhHhhhhcc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHING   25 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlng   25 (124)
                      -|-|++|++.|.....|..|+..
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2ytt_A           12 PYQCSECGKSFSGSYRLTQHWIT   34 (46)
T ss_dssp             TTCCSSSCCCCSSHHHHHHHHTH
T ss_pred             CeeCCCCCcccCCHHHHHHHHHH
Confidence            48899999999999999999864

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.28  E-value=0.017  Score=31.97  Aligned_cols=22  Identities=32%  Similarity=0.708  Sum_probs=20.4

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~   33 (46)
T 2emh_A           12 PYICTVCGKAFTDRSNLIKHQK   33 (46)
T ss_dssp             SEECTTTCCEESSHHHHHHHHH
T ss_pred             CcCCCCCCchhCCHHHHHHHHH
Confidence            5889999999999999999984

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=94.28  E-value=0.017  Score=32.04  Aligned_cols=22  Identities=23%  Similarity=0.413  Sum_probs=20.3

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2em4_A           12 PYECIECGKAFKTKSSLICHRR   33 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CcCCCCCCCccCCHHHHHHHHH
Confidence            5889999999999999999974

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.28  E-value=0.017  Score=32.21  Aligned_cols=22  Identities=23%  Similarity=0.415  Sum_probs=20.4

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2ytm_A           12 PYKCMECGKAFGDNSSCTQHQR   33 (46)
T ss_dssp             SSSBTTTTBCCSSHHHHHHHHH
T ss_pred             CcCCCCCCchhCCHHHHHHHHH
Confidence            5889999999999999999985

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=94.27  E-value=0.018  Score=31.90  Aligned_cols=23  Identities=22%  Similarity=0.404  Sum_probs=20.9

Q ss_pred             CccccccCceecchhhHhhhhcc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHING   25 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlng   25 (124)
                      .|-|++|++.|.....|..|+..
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~   34 (46)
T 2em0_A           12 TWKCRECDMCFSQASSLRLHQNV   34 (46)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHGGG
T ss_pred             CeECCCCCcccCCHHHHHHHHHH
Confidence            48899999999999999999854

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=94.26  E-value=0.019  Score=31.91  Aligned_cols=23  Identities=22%  Similarity=0.478  Sum_probs=20.8

Q ss_pred             CccccccCceecchhhHhhhhcc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHING   25 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlng   25 (124)
                      .|-|++|++.|.....|..|+..
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2el6_A           12 PYKCSQCEKSFSGKLRLLVHQRM   34 (46)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGG
T ss_pred             CeECCCCCcccCCHHHHHHHHHH
Confidence            48899999999999999999854

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.26  E-value=0.016  Score=32.17  Aligned_cols=22  Identities=18%  Similarity=0.428  Sum_probs=20.4

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2emz_A           12 PFKCNECGKGFGRRSHLAGHLR   33 (46)
T ss_dssp             SCCCSSSCCCCSSHHHHHHHHH
T ss_pred             CeECCCCCcccCCHHHHHHHHH
Confidence            5889999999999999999985

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=94.26  E-value=0.018  Score=32.01  Aligned_cols=22  Identities=18%  Similarity=0.548  Sum_probs=20.4

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~   33 (46)
T 2emk_A           12 PYECKECGKAFSQTTHLIQHQR   33 (46)
T ss_dssp             SCBCSSSCCBCSCHHHHHHHHH
T ss_pred             ceECCCCCchhCCHHHHHHHHH
Confidence            5899999999999999999984

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.25  E-value=0.017  Score=31.97  Aligned_cols=22  Identities=18%  Similarity=0.436  Sum_probs=20.3

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~   33 (45)
T 2epu_A           12 PFECTHCGKSFRAKGNLVTHQR   33 (45)
T ss_dssp             SEEETTTTEEESSHHHHHHHHT
T ss_pred             CccCCCCCCccCChHHHHHHHH
Confidence            5889999999999999999985

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.24  E-value=0.018  Score=31.99  Aligned_cols=22  Identities=18%  Similarity=0.620  Sum_probs=20.3

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2em2_A           12 PFKCKECGKAFRQNIHLASHLR   33 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CEECCcCCchhCCHHHHHHHHH
Confidence            5889999999999999999975

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=94.24  E-value=0.019  Score=31.67  Aligned_cols=23  Identities=17%  Similarity=0.340  Sum_probs=20.7

Q ss_pred             CccccccCceecchhhHhhhhcc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHING   25 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlng   25 (124)
                      .|-|++|+++|.....|..|+..
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2el4_A           12 PYGCSQCAKTFSLKSQLIVHQRS   34 (46)
T ss_dssp             SEECSSSSCEESSHHHHHHHGGG
T ss_pred             ceECCCCCchhCCHHHHHHHHHH
Confidence            48899999999999999999853

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=94.24  E-value=0.018  Score=31.55  Aligned_cols=22  Identities=18%  Similarity=0.439  Sum_probs=20.4

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        10 ~~~C~~C~k~f~~~~~L~~H~~   31 (44)
T 2emx_A           10 PFGCSCCEKAFSSKSYLLVHQQ   31 (44)
T ss_dssp             CEECSSSSCEESSHHHHHHHHH
T ss_pred             CccCCCCCcccCCHHHHHHHHH
Confidence            5889999999999999999975

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=94.24  E-value=0.019  Score=31.69  Aligned_cols=23  Identities=22%  Similarity=0.374  Sum_probs=20.8

Q ss_pred             CccccccCceecchhhHhhhhcc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHING   25 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlng   25 (124)
                      .|-|++|++.|.....|..|+..
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2em9_A           12 PYNCKECGKSFRWASCLLKHQRV   34 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHGGG
T ss_pred             CeECCccccccCChHHHHHHHHH
Confidence            58899999999999999999853

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.18  E-value=0.017  Score=31.97  Aligned_cols=23  Identities=22%  Similarity=0.320  Sum_probs=20.8

Q ss_pred             CccccccCceecchhhHhhhhcc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHING   25 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlng   25 (124)
                      .|-|++|++.|.....|..|+..
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2ysp_A           12 PYKCEKCGKGYNSKFNLDMHQKV   34 (46)
T ss_dssp             SEEETTTTEEESCHHHHHHHHTT
T ss_pred             CeECCCCCCccCCHHHHHHHHHh
Confidence            58899999999999999999853

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.17  E-value=0.02  Score=31.63  Aligned_cols=22  Identities=27%  Similarity=0.540  Sum_probs=20.4

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~   33 (46)
T 2ytn_A           12 PYKCNECGKVFTQNSHLARHRG   33 (46)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHGG
T ss_pred             CeECCCCCCeeCCHHHHHHHhh
Confidence            5889999999999999999985

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=94.16  E-value=0.019  Score=32.36  Aligned_cols=23  Identities=17%  Similarity=0.437  Sum_probs=20.8

Q ss_pred             CccccccCceecchhhHhhhhcc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHING   25 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlng   25 (124)
                      .|-|++|++.|.....|..|+..
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~   34 (48)
T 2epr_A           12 QVACEICGKIFRDVYHLNRHKLS   34 (48)
T ss_dssp             SEEETTTTEEESSHHHHHHHGGG
T ss_pred             CeeCCCCCcccCCHHHHHHHHHh
Confidence            58899999999999999999853

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=94.15  E-value=0.02  Score=31.66  Aligned_cols=23  Identities=17%  Similarity=0.216  Sum_probs=20.7

Q ss_pred             CccccccCceecchhhHhhhhcc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHING   25 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlng   25 (124)
                      .|-|++|++.|.....|..|+..
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2em7_A           12 PYKCEECGKGFICRRDLYTHHMV   34 (46)
T ss_dssp             SEECSSSCCEESCHHHHHHHGGG
T ss_pred             CccCCCccchhCCHHHHHHHHHH
Confidence            58899999999999999999853

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=94.15  E-value=0.011  Score=33.96  Aligned_cols=21  Identities=29%  Similarity=0.660  Sum_probs=13.7

Q ss_pred             ccccccCceecchhhHhhhhc
Q psy7022           4 YYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         4 fyC~vCd~~fkDs~~~ldHln   24 (124)
                      |.|++|+..|.....|..|+.
T Consensus        30 ~~C~~C~~~f~~~~~l~~H~~   50 (57)
T 1bbo_A           30 YHCTYCNFSFKTKGNLTKHMK   50 (57)
T ss_dssp             EECSSSSCEESSHHHHHHHHH
T ss_pred             ccCCCCCchhcCHHHHHHHHH
Confidence            566666666666666666654

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.15  E-value=0.018  Score=31.90  Aligned_cols=22  Identities=14%  Similarity=0.341  Sum_probs=20.3

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2eoq_A           12 PFKCDICGKSFCGRSRLNRHSM   33 (46)
T ss_dssp             SCCCSSSCCCCSSHHHHHHHHH
T ss_pred             CcCCCcCCchhCCHHHHHHHHH
Confidence            5889999999999999999975

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.13  E-value=0.019  Score=31.63  Aligned_cols=22  Identities=23%  Similarity=0.409  Sum_probs=20.3

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2emm_A           12 PHKCNECGKSFIQSAHLIQHQR   33 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CeeCCCCChhhCCHHHHHHHHH
Confidence            5889999999999999999985

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=94.13  E-value=0.019  Score=31.73  Aligned_cols=23  Identities=26%  Similarity=0.453  Sum_probs=20.9

Q ss_pred             CccccccCceecchhhHhhhhcc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHING   25 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlng   25 (124)
                      .|-|++|++.|.....|..|+..
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2ema_A           12 RYKCNECGKVFSRNSQLSQHQKI   34 (46)
T ss_dssp             CEECSSSCCEESSHHHHHHHHTG
T ss_pred             CcCCCCCcchhCCHHHHHHHHHh
Confidence            58899999999999999999854

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.13  E-value=0.019  Score=31.69  Aligned_cols=22  Identities=14%  Similarity=0.185  Sum_probs=20.2

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~   33 (46)
T 2epw_A           12 PCKCTECGKAFCWKSQLIMHQR   33 (46)
T ss_dssp             SEECSSSCCEESSSHHHHHHHH
T ss_pred             CeeCCCCCCccCCHHHHHHHHH
Confidence            4889999999999999999974

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=94.12  E-value=0.019  Score=31.73  Aligned_cols=22  Identities=14%  Similarity=0.415  Sum_probs=20.2

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2yso_A           12 SHQCRECGEIFFQYVSLIEHQV   33 (46)
T ss_dssp             CEECTTTCCEESSHHHHHHHHH
T ss_pred             CEEccccChhhCCHHHHHHHHH
Confidence            4889999999999999999974

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=94.11  E-value=0.019  Score=32.90  Aligned_cols=23  Identities=13%  Similarity=0.297  Sum_probs=19.0

Q ss_pred             CCccccccCceecchhhHhhhhc
Q psy7022           2 LGYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         2 ~gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      ..|-|++|++.|.+...|..|+.
T Consensus         3 ~~~~C~~C~~~f~~~~~l~~H~~   25 (57)
T 3uk3_C            3 SSRECSYCGKFFRSNYYLNIHLR   25 (57)
T ss_dssp             --CBCTTTCCBCSCHHHHHHHHH
T ss_pred             CCccCCCCcchhCChHHHHHHHH
Confidence            35889999999999999999986

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=94.10  E-value=0.021  Score=28.84  Aligned_cols=23  Identities=17%  Similarity=0.340  Sum_probs=20.2

Q ss_pred             Ccccc--ccCceecchhhHhhhhcc
Q psy7022           3 GYYCN--VCDCVVKDSINFLDHING   25 (124)
Q Consensus         3 gfyC~--vCd~~fkDs~~~ldHlng   25 (124)
                      -|-|+  .|++.|.....|..|+..
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~   26 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRT   26 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTT
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHH
Confidence            47898  999999999999999853

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=94.10  E-value=0.018  Score=31.92  Aligned_cols=22  Identities=14%  Similarity=0.193  Sum_probs=20.4

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2ely_A           12 PFKCVECGKGFSRRSALNVHHK   33 (46)
T ss_dssp             SBCCSSSCCCBSSTTHHHHHHH
T ss_pred             CcccCccCcccCCHHHHHHHHH
Confidence            5889999999999999999985

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.09  E-value=0.019  Score=31.64  Aligned_cols=22  Identities=23%  Similarity=0.409  Sum_probs=20.2

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2eq4_A           12 LYNCKECGKSFSRAPCLLKHER   33 (46)
T ss_dssp             CCCBTTTTBCCSCHHHHHHHHH
T ss_pred             CeECCCCCCccCchHHHHHHHH
Confidence            4889999999999999999974

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.08  E-value=0.02  Score=31.76  Aligned_cols=23  Identities=22%  Similarity=0.265  Sum_probs=20.8

Q ss_pred             CccccccCceecchhhHhhhhcc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHING   25 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlng   25 (124)
                      .|-|++|++.|.....|..|+..
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2em8_A           12 PYKCVECGKGYKRRLDLDFHQRV   34 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHH
T ss_pred             CeECcccCchhCCHHHHHHHHHH
Confidence            58899999999999999999853

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.07  E-value=0.02  Score=31.65  Aligned_cols=22  Identities=27%  Similarity=0.584  Sum_probs=20.3

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2ytk_A           12 PYKCNECGKVFTQNSHLTNHWR   33 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CEeCCcCCCccCCHHHHHHHHH
Confidence            5889999999999999999985

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.06  E-value=0.019  Score=31.71  Aligned_cols=23  Identities=22%  Similarity=0.413  Sum_probs=20.8

Q ss_pred             CccccccCceecchhhHhhhhcc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHING   25 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlng   25 (124)
                      .|-|++|++.|.....|..|+..
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2ytr_A           12 PYKCNECGKAFSQTSKLARHQRI   34 (46)
T ss_dssp             TTCCTTTCCCCSSHHHHHHHHTT
T ss_pred             CcCCCCCCCccCCHHHHHHHHHh
Confidence            58899999999999999999853

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.01  E-value=0.022  Score=31.57  Aligned_cols=22  Identities=23%  Similarity=0.369  Sum_probs=20.5

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~   33 (46)
T 2elz_A           12 PYKCEDCGKGYNRRLNLDMHQR   33 (46)
T ss_dssp             SCBCSSSCCBCSSHHHHHHHGG
T ss_pred             CeeCcccCchhCCHHHHHHHHH
Confidence            5899999999999999999985

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.00  E-value=0.021  Score=31.55  Aligned_cols=22  Identities=23%  Similarity=0.386  Sum_probs=20.4

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2emp_A           12 PYMCNECGKAFSVYSSLTTHQV   33 (46)
T ss_dssp             SEECSSSCCEESCHHHHHHHHH
T ss_pred             CeECCCCCchhCCHHHHHHHHH
Confidence            4889999999999999999985

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=93.99  E-value=0.021  Score=31.64  Aligned_cols=23  Identities=17%  Similarity=0.405  Sum_probs=20.8

Q ss_pred             CccccccCceecchhhHhhhhcc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHING   25 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlng   25 (124)
                      .|-|++|++.|.....|..|+..
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2ytq_A           12 PYGCSECGKAFSSKSYLIIHMRT   34 (46)
T ss_dssp             SCBCSSSCCBCSCHHHHHHHHTT
T ss_pred             CcCCCccChhhCChHHHHHHHHH
Confidence            58899999999999999999853

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=93.91  E-value=0.023  Score=31.43  Aligned_cols=22  Identities=18%  Similarity=0.454  Sum_probs=20.3

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2ytd_A           12 PYKCSECGKAFHRHTHLNEHRR   33 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CeECCCCCCeeCChHHHHHHHH
Confidence            5889999999999999999974

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=93.88  E-value=0.023  Score=31.45  Aligned_cols=22  Identities=27%  Similarity=0.539  Sum_probs=20.3

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2yu8_A           12 PYKCNECGKVFTQNSHLARHRR   33 (46)
T ss_dssp             SEECSSSCCEESSSHHHHHHTH
T ss_pred             CeECCcCCchhCCHHHHHHHHH
Confidence            5889999999999999999984

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=93.88  E-value=0.023  Score=31.40  Aligned_cols=23  Identities=22%  Similarity=0.385  Sum_probs=20.7

Q ss_pred             CccccccCceecchhhHhhhhcc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHING   25 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlng   25 (124)
                      .|-|++|++.|.....|..|+..
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2ep0_A           12 PYKCDVCHKSFRYGSSLTVHQRI   34 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHHTT
T ss_pred             CeeCcccCcccCChHHHHHHHHH
Confidence            48899999999999999999853

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=93.83  E-value=0.021  Score=31.49  Aligned_cols=22  Identities=27%  Similarity=0.584  Sum_probs=20.4

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~   33 (46)
T 2eoe_A           12 PYKCNECGKVFTQNSHLANHQR   33 (46)
T ss_dssp             SSEETTTTEECSSHHHHHHHHG
T ss_pred             CeECCCcChhhCCHHHHHHHHH
Confidence            5899999999999999999985

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=93.82  E-value=0.025  Score=31.24  Aligned_cols=23  Identities=13%  Similarity=0.310  Sum_probs=20.7

Q ss_pred             CccccccCceecchhhHhhhhcc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHING   25 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlng   25 (124)
                      .|-|++|++.|.....|..|+..
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2en1_A           12 PFKCEECGKRFTQNSQLHSHQRV   34 (46)
T ss_dssp             SEEETTTTEEESSHHHHHHHGGG
T ss_pred             CeeCCCCCcccCCHHHHHHHHHH
Confidence            48899999999999999999853

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=93.79  E-value=0.024  Score=31.20  Aligned_cols=22  Identities=14%  Similarity=0.089  Sum_probs=20.2

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2en8_A           12 SHTCDECGKNFCYISALRIHQR   33 (46)
T ss_dssp             SEECTTTCCEESSHHHHHHHHT
T ss_pred             CeECCCcCcccCCHHHHHHHHH
Confidence            4889999999999999999974

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=93.78  E-value=0.027  Score=28.51  Aligned_cols=23  Identities=22%  Similarity=0.534  Sum_probs=20.5

Q ss_pred             Ccccc--ccCceecchhhHhhhhcc
Q psy7022           3 GYYCN--VCDCVVKDSINFLDHING   25 (124)
Q Consensus         3 gfyC~--vCd~~fkDs~~~ldHlng   25 (124)
                      .|-|+  .|++.|.....|..|+..
T Consensus         3 ~~~C~~~~C~k~f~~~~~L~~H~~~   27 (32)
T 1zfd_A            3 PYSCDHPGCDKAFVRNHDLIRHKKS   27 (32)
T ss_dssp             SBCCCCTTCCCCBSSSHHHHHHHGG
T ss_pred             CCcCcCCCCCCccCCHHHHHHHHHH
Confidence            47899  899999999999999853

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=93.78  E-value=0.024  Score=32.47  Aligned_cols=21  Identities=29%  Similarity=0.590  Sum_probs=19.8

Q ss_pred             ccccccCceecchhhHhhhhc
Q psy7022           4 YYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         4 fyC~vCd~~fkDs~~~ldHln   24 (124)
                      |-|++|+..|.....|..|+.
T Consensus         2 ~~C~~C~~~f~~~~~l~~H~~   22 (57)
T 1bbo_A            2 YICEECGIRXKKPSMLKKHIR   22 (57)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHH
T ss_pred             CcCCCCcCcCCCHHHHHHHHH
Confidence            789999999999999999985

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=93.74  E-value=0.026  Score=31.22  Aligned_cols=22  Identities=14%  Similarity=0.294  Sum_probs=20.2

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2enc_A           12 PFKCEECGKGFYTNSQCYSHQR   33 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CcCCCCCCCcCCChHHHHHHHH
Confidence            4889999999999999999974

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=93.74  E-value=0.022  Score=31.40  Aligned_cols=23  Identities=26%  Similarity=0.472  Sum_probs=20.7

Q ss_pred             CccccccCceecchhhHhhhhcc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHING   25 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlng   25 (124)
                      .|-|++|++.|.....|..|+..
T Consensus        10 ~~~C~~C~k~f~~~~~l~~H~~~   32 (45)
T 2epq_A           10 PYSCPVCGLRFKRKDRMSYHVRS   32 (45)
T ss_dssp             SSEETTTTEECSCHHHHHHHHHH
T ss_pred             CCcCCCCCcccCCHHHHHHHHHH
Confidence            58899999999999999999853

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=93.68  E-value=0.025  Score=32.83  Aligned_cols=23  Identities=17%  Similarity=0.483  Sum_probs=19.5

Q ss_pred             CccccccCceecchhhHhhhhcc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHING   25 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlng   25 (124)
                      .|-|++|++.|.....|..|+..
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~   24 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHYRS   24 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHT
T ss_pred             cCcCCCCccccCCHHHHHHHHHH
Confidence            47899999999999999998853

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=93.67  E-value=0.024  Score=31.32  Aligned_cols=22  Identities=23%  Similarity=0.380  Sum_probs=20.3

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2en6_A           12 PYGCNECGKTFSQKSILSAHQR   33 (46)
T ss_dssp             CEEETTTTEEESSHHHHHHHHH
T ss_pred             CeECCCCCcccCchHHHHHHHH
Confidence            4889999999999999999985

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=93.66  E-value=0.027  Score=32.27  Aligned_cols=22  Identities=18%  Similarity=0.578  Sum_probs=20.4

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|+..|.....|..|+.
T Consensus        32 ~~~C~~C~~~f~~~~~l~~H~~   53 (57)
T 3uk3_C           32 PYKCEFCEYAAAQKTSLRYHLE   53 (57)
T ss_dssp             CEECSSSSCEESSHHHHHHHHH
T ss_pred             CcCCCCCcchhCCHHHHHHHHH
Confidence            4889999999999999999985

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=93.40  E-value=0.03  Score=32.46  Aligned_cols=22  Identities=18%  Similarity=0.481  Sum_probs=20.2

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        30 ~~~C~~C~~~f~~~~~l~~H~~   51 (60)
T 2adr_A           30 PYPCGLCNRAFTRRDLLIRHAQ   51 (60)
T ss_dssp             SEECTTTCCEESSHHHHHHHHT
T ss_pred             CccCCCCCCccCCHHHHHHHHH
Confidence            5889999999999999999974

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=93.37  E-value=0.037  Score=32.68  Aligned_cols=22  Identities=23%  Similarity=0.369  Sum_probs=17.6

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        40 ~~~C~~C~k~f~~~~~L~~H~~   61 (66)
T 2drp_A           40 VYPCPFCFKEFTRKDNMTAHVK   61 (66)
T ss_dssp             CEECTTTCCEESCHHHHHHHHH
T ss_pred             CeECCCCCCccCCHHHHHHHHH
Confidence            4778888888888888888874

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=93.34  E-value=0.032  Score=33.61  Aligned_cols=22  Identities=23%  Similarity=0.475  Sum_probs=16.0

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        49 ~~~C~~C~~~f~~~~~l~~H~~   70 (73)
T 1f2i_G           49 PFQCRICMRNFSRSDHLTTHIR   70 (73)
T ss_dssp             CEECTTTCCEESCHHHHHHHHT
T ss_pred             CeECCCCCchhCCHHHHHHHHH
Confidence            3677777777777777777764

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=93.34  E-value=0.031  Score=33.04  Aligned_cols=23  Identities=35%  Similarity=0.589  Sum_probs=20.6

Q ss_pred             CccccccCceecchhhHhhhhcc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHING   25 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlng   25 (124)
                      .|-|++|++.|.....|..|+..
T Consensus        10 ~~~C~~C~k~f~~~~~l~~H~~~   32 (66)
T 2drp_A           10 TYRCKVCSRVYTHISNFCRHYVT   32 (66)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHH
T ss_pred             ceECCCCcchhCCHHHHHHHHHH
Confidence            48899999999999999999753

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=93.10  E-value=0.035  Score=33.63  Aligned_cols=22  Identities=18%  Similarity=0.480  Sum_probs=18.5

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        42 ~~~C~~C~~~f~~~~~L~~H~~   63 (72)
T 1x6e_A           42 PYKCLECGKAFSQNSGLINHQR   63 (72)
T ss_dssp             CEECSSSCCEESSHHHHHHHHH
T ss_pred             CeECCCCCcccCCHHHHHHHHH
Confidence            4789999999998888888874

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=93.10  E-value=0.035  Score=34.24  Aligned_cols=22  Identities=23%  Similarity=0.641  Sum_probs=18.6

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      -|-|++|++.|.....|..|+.
T Consensus         4 py~C~~C~k~F~~~~~L~~H~~   25 (60)
T 4gzn_C            4 PFFCNFCGKTYRDASGLSRHRR   25 (60)
T ss_dssp             CEECTTTCCEESSHHHHHHHHH
T ss_pred             CccCCCCCCEeCCHHHHHHHHH
Confidence            4788999999999988888875

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=93.08  E-value=0.039  Score=29.29  Aligned_cols=22  Identities=18%  Similarity=0.484  Sum_probs=19.6

Q ss_pred             Cccccc--cCceecchhhHhhhhc
Q psy7022           3 GYYCNV--CDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~v--Cd~~fkDs~~~ldHln   24 (124)
                      .|-|.+  |++.|..+..|..|+.
T Consensus         8 ~~~C~~~~C~k~f~~~~~L~~H~~   31 (37)
T 1va1_A            8 QHICHIQGCGKVYGKTSHLRAHLR   31 (37)
T ss_dssp             CEECCSTTCCCEESCHHHHHHHHH
T ss_pred             CCCCCCCCCCCccCCHHHHHHHHH
Confidence            478995  9999999999999974

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=93.05  E-value=0.037  Score=33.27  Aligned_cols=22  Identities=27%  Similarity=0.608  Sum_probs=18.8

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|.|++|++.|.....|..|+.
T Consensus        37 ~~~C~~C~~~f~~~~~L~~H~~   58 (70)
T 1x5w_A           37 PFKCNYCSFDTKQPSNLSKHMK   58 (70)
T ss_dssp             SEECSSSSCEESSHHHHHHHHH
T ss_pred             CEeCCCCCCccCCHHHHHHHHH
Confidence            4789999999999999988874

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=93.04  E-value=0.038  Score=34.08  Aligned_cols=22  Identities=18%  Similarity=0.386  Sum_probs=20.5

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        32 p~~C~~C~k~F~~~~~L~~H~~   53 (60)
T 4gzn_C           32 PRSCPECGKCFRDQSEVNRHLK   53 (60)
T ss_dssp             CEECTTTCCEESSHHHHHHHGG
T ss_pred             CeECCCCCCCcCCHHHHHHHhC
Confidence            5899999999999999999985

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=93.02  E-value=0.039  Score=33.15  Aligned_cols=23  Identities=13%  Similarity=0.137  Sum_probs=21.1

Q ss_pred             CccccccCceecchhhHhhhhcc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHING   25 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlng   25 (124)
                      .|-|++|++.|.....|..|+..
T Consensus         9 ~~~C~~C~k~f~~~~~L~~H~~~   31 (70)
T 1x5w_A            9 PEKCSECSYSCSSKAALRIHERI   31 (70)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGG
T ss_pred             CeECCCCCcccCCHHHHHHHHHH
Confidence            58899999999999999999864

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=93.01  E-value=0.035  Score=31.85  Aligned_cols=23  Identities=17%  Similarity=0.466  Sum_probs=21.2

Q ss_pred             CCccccccCceecchhhHhhhhc
Q psy7022           2 LGYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         2 ~gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      -||-|++|-+.|.+...+..|.-
T Consensus         4 EGFiCP~C~~~l~s~~~L~~Hye   26 (34)
T 3mjh_B            4 EGFICPQCMKSLGSADELFKHYE   26 (34)
T ss_dssp             EEEECTTTCCEESSHHHHHHHHH
T ss_pred             cccCCcHHHHHcCCHHHHHHHHH
Confidence            48999999999999999999973

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=92.96  E-value=0.039  Score=31.91  Aligned_cols=22  Identities=23%  Similarity=0.453  Sum_probs=20.1

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      -|-|++|++.|.....|..|+.
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~   33 (54)
T 2eps_A           12 PYICQSCGKGFSRPDHLNGHIK   33 (54)
T ss_dssp             CEECSSSCCEESSHHHHHHHHH
T ss_pred             CeECCCCCcccCCHHHHHHHHH
Confidence            4889999999999999999974

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=92.93  E-value=0.038  Score=33.82  Aligned_cols=22  Identities=27%  Similarity=0.454  Sum_probs=19.5

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        15 ~~~C~~C~k~f~~~~~L~~H~~   36 (77)
T 2ct1_A           15 PYECYICHARFTQSGTMKMHIL   36 (77)
T ss_dssp             SEECTTTCCEESCHHHHHHHHH
T ss_pred             CeECCCcCchhCCHHHHHHHHH
Confidence            4889999999999999999974

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=92.91  E-value=0.039  Score=33.76  Aligned_cols=22  Identities=18%  Similarity=0.504  Sum_probs=19.9

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      -|-|++|++.|.....|..|+.
T Consensus         7 ~~~C~~C~k~f~~~~~L~~H~~   28 (78)
T 2d9h_A            7 GLQCEICGFTCRQKASLNWHQR   28 (78)
T ss_dssp             CEECSSSCCEESSHHHHHHHHH
T ss_pred             CeECCCCCCeeCCHHHHHHHHH
Confidence            5889999999999999999984

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=92.88  E-value=0.039  Score=33.40  Aligned_cols=23  Identities=22%  Similarity=0.317  Sum_probs=21.0

Q ss_pred             CccccccCceecchhhHhhhhcc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHING   25 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlng   25 (124)
                      .|-|++|++.|.....|..|+..
T Consensus        14 ~~~C~~C~k~f~~~~~L~~H~~~   36 (72)
T 1x6e_A           14 PYGCVECGKAFSRSSILVQHQRV   36 (72)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHG
T ss_pred             CccCCCCCCccCCHHHHHHHHHh
Confidence            58999999999999999999853

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=92.86  E-value=0.042  Score=31.02  Aligned_cols=22  Identities=23%  Similarity=0.498  Sum_probs=19.6

Q ss_pred             Cccccc--cCceecchhhHhhhhc
Q psy7022           3 GYYCNV--CDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~v--Cd~~fkDs~~~ldHln   24 (124)
                      .|-|++  |++.|.....|..|+.
T Consensus         9 p~~C~~~~C~k~F~~~~~L~~H~r   32 (38)
T 2eln_A            9 LLKCPTDGCDYSTPDKYKLQAHLK   32 (38)
T ss_dssp             CEECSSSSCCCEESCHHHHHHHHH
T ss_pred             CCCCCCCCCCCccCCHHHHHHHHH
Confidence            488987  9999999999999973

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=92.83  E-value=0.041  Score=33.67  Aligned_cols=22  Identities=23%  Similarity=0.549  Sum_probs=20.4

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        45 ~~~C~~C~~~f~~~~~L~~H~~   66 (77)
T 2ct1_A           45 KFHCPHCDTVIARKSDLGVHLR   66 (77)
T ss_dssp             SEECSSSSCEESSHHHHHHHHH
T ss_pred             ccCCCCCCCccCCHHHHHHHHH
Confidence            5899999999999999999984

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=92.71  E-value=0.041  Score=34.48  Aligned_cols=22  Identities=23%  Similarity=0.453  Sum_probs=19.0

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|.|++|++.|.+...|..|+.
T Consensus        65 ~~~C~~C~~~f~~~~~L~~H~~   86 (95)
T 2yt9_A           65 PYICQSCGKGFSRPDHLNGHIK   86 (95)
T ss_dssp             SBCCSSSCCCBSSHHHHHHHHH
T ss_pred             ceECCCccchhCCHHHHHHHHH
Confidence            5889999999999999998874

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=92.64  E-value=0.044  Score=33.50  Aligned_cols=21  Identities=14%  Similarity=0.347  Sum_probs=19.8

Q ss_pred             CccccccCceecchhhHhhhh
Q psy7022           3 GYYCNVCDCVVKDSINFLDHI   23 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHl   23 (124)
                      .|-|++|++.|.....|..|+
T Consensus        38 ~~~C~~C~k~f~~~~~L~~H~   58 (78)
T 2d9h_A           38 RFPCEFCGKRFEKPDSVAAHR   58 (78)
T ss_dssp             CEECTTTCCEESSHHHHHHHH
T ss_pred             ccCCCCCCchhCCHHHHHHHH
Confidence            589999999999999999997

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=92.62  E-value=0.049  Score=28.68  Aligned_cols=22  Identities=14%  Similarity=0.341  Sum_probs=19.5

Q ss_pred             Ccccc--ccCceecchhhHhhhhc
Q psy7022           3 GYYCN--VCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~--vCd~~fkDs~~~ldHln   24 (124)
                      -|-|.  .|++.|.....|..|+.
T Consensus         6 ~~~C~~~~C~k~f~~~~~L~~H~~   29 (38)
T 1bhi_A            6 PFLCTAPGCGQRFTNEDHLAVHKH   29 (38)
T ss_dssp             CEECCCTTTCCEESSHHHHHHHHH
T ss_pred             ceECCCCCCCcccCCHHHHHHHHH
Confidence            48899  59999999999999974

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=92.59  E-value=0.044  Score=36.02  Aligned_cols=22  Identities=27%  Similarity=0.514  Sum_probs=17.9

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      -|-|++|++.|.....|..|+.
T Consensus        56 ~~~C~~C~k~F~~~~~L~~H~~   77 (85)
T 2lv2_A           56 VFPCKYCPATFYSSPGLTRHIN   77 (85)
T ss_dssp             SEECTTSSCEESSHHHHHHHHH
T ss_pred             ccCCCCCCCEeCCHHHHHHhCc
Confidence            4778888888888888888874

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=92.57  E-value=0.046  Score=33.12  Aligned_cols=22  Identities=27%  Similarity=0.504  Sum_probs=17.8

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|.|++|++.|.+...|..|+.
T Consensus        57 ~~~C~~C~~~f~~~~~l~~H~~   78 (82)
T 2kmk_A           57 PHKCQVCGKAFSQSSNLITHSR   78 (82)
T ss_dssp             CEECTTTSCEESSHHHHHHHHH
T ss_pred             CCcCCCcchhhCChHHHHHHHH
Confidence            4778888888888888888864

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=92.28  E-value=0.052  Score=33.58  Aligned_cols=23  Identities=17%  Similarity=0.300  Sum_probs=19.5

Q ss_pred             CccccccCceecchhhHhhhhcc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHING   25 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlng   25 (124)
                      .|.|++|++.|.....|..|+..
T Consensus        62 ~~~C~~C~~~f~~~~~l~~H~~~   84 (90)
T 1a1h_A           62 PFACDICGRKFARSDERKRHTKI   84 (90)
T ss_dssp             CEECTTTCCEESSHHHHHHHHGG
T ss_pred             CccCCCCCchhCCHHHHHHHHHH
Confidence            47899999999999999999853

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=92.20  E-value=0.054  Score=32.84  Aligned_cols=22  Identities=27%  Similarity=0.652  Sum_probs=18.2

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        45 ~~~C~~C~k~f~~~~~L~~H~~   66 (74)
T 2lce_A           45 PYRCNICGAQFNRPANLKTHTR   66 (74)
T ss_dssp             SEECTTTCCEESCHHHHHHHHH
T ss_pred             CEECCCCCchhCCHHHHHHHHH
Confidence            4778888888888888888874

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=92.16  E-value=0.055  Score=33.96  Aligned_cols=22  Identities=18%  Similarity=0.591  Sum_probs=19.1

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|.|++|++.|.....|..|+.
T Consensus        64 ~~~C~~C~~~f~~~~~l~~H~~   85 (96)
T 2dmd_A           64 PFKCQICPYASRNSSQLTVHLR   85 (96)
T ss_dssp             CEECSSSSCEESSHHHHHHHHT
T ss_pred             CccCCCCCCccCCHHHHHHHHH
Confidence            4889999999999999999875

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=92.09  E-value=0.057  Score=32.68  Aligned_cols=22  Identities=23%  Similarity=0.465  Sum_probs=19.2

Q ss_pred             ccccccCceecchhhHhhhhcc
Q psy7022           4 YYCNVCDCVVKDSINFLDHING   25 (124)
Q Consensus         4 fyC~vCd~~fkDs~~~ldHlng   25 (124)
                      |-|++|++.|.+...|..|+..
T Consensus         2 ~~C~~C~~~f~~~~~l~~H~~~   23 (82)
T 2kmk_A            2 FDCKICGKSFKRSSTLSTHLLI   23 (82)
T ss_dssp             EECSSSCCEESSHHHHHHHHHH
T ss_pred             ccCCCCcccccCchhHHHHHHH
Confidence            7799999999999999999853

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=92.08  E-value=0.069  Score=32.35  Aligned_cols=23  Identities=22%  Similarity=0.446  Sum_probs=20.9

Q ss_pred             CCccccccCceecchhhHhhhhc
Q psy7022           2 LGYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         2 ~gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      ..|-|++|++.|.....|..|+.
T Consensus        16 ~~~~C~~C~k~f~~~~~l~~H~~   38 (74)
T 2lce_A           16 KPYKCDRCQASFRYKGNLASHKT   38 (74)
T ss_dssp             CSBCCTTSSCCBSCHHHHHHHHH
T ss_pred             CCeECCCCCceeCCHHHHHHHHH
Confidence            35899999999999999999985

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=91.91  E-value=0.056  Score=34.26  Aligned_cols=22  Identities=23%  Similarity=0.388  Sum_probs=20.2

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      -|-|.+|++.|.....|..|+.
T Consensus        13 py~C~~CgK~F~~~s~L~~H~r   34 (66)
T 2epp_A           13 ILPCGLCGKVFTDANRLRQHEA   34 (66)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHH
T ss_pred             CcCCCCCCCccCCHHHHHhhhh
Confidence            4889999999999999999974

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=91.82  E-value=0.052  Score=35.17  Aligned_cols=22  Identities=18%  Similarity=0.280  Sum_probs=19.3

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        54 ~~~C~~C~k~F~~~~~L~~H~~   75 (98)
T 2gqj_A           54 ALKCQHCRKQFKSKAGLNYHTM   75 (98)
T ss_dssp             HHSCSSSCCCCSCHHHHHHHHH
T ss_pred             CEECCCCCCccCCHHHHHHHHH
Confidence            3789999999999999999974

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=91.73  E-value=0.068  Score=32.61  Aligned_cols=23  Identities=22%  Similarity=0.446  Sum_probs=19.5

Q ss_pred             CccccccCceecchhhHhhhhcc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHING   25 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlng   25 (124)
                      .|-|++|++.|.....|..|+..
T Consensus        18 ~~~C~~C~~~f~~~~~l~~H~~~   40 (77)
T 2cot_A           18 RYKCDECGKSFSHSSDLSKHRRT   40 (77)
T ss_dssp             SSBCSSSCCBCSCHHHHHHHHTT
T ss_pred             CEECCCCCcccCCHHHHHHHHHH
Confidence            58899999999999999998853

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=91.68  E-value=0.068  Score=32.72  Aligned_cols=22  Identities=23%  Similarity=0.448  Sum_probs=19.4

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      -|.|++|++.|.....|..|+.
T Consensus        15 ~~~C~~C~~~f~~~~~l~~H~~   36 (86)
T 1x6h_A           15 PYACSHCDKTFRQKQLLDMHFK   36 (86)
T ss_dssp             CEECSSSSCEESSHHHHHHHHH
T ss_pred             CCcCCCCCCccCCHHHHHHHHH
Confidence            4889999999999999999874

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=91.68  E-value=0.078  Score=33.15  Aligned_cols=23  Identities=22%  Similarity=0.511  Sum_probs=17.5

Q ss_pred             CCccccccCceecchhhHhhhhc
Q psy7022           2 LGYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         2 ~gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      ..|-|++|+..|.+...|..|+.
T Consensus         6 ~~~~C~~C~~~f~~~~~l~~H~~   28 (95)
T 2yt9_A            6 SGVACEICGKIFRDVYHLNRHKL   28 (95)
T ss_dssp             SCEECSSSCCEESSSHHHHHHHH
T ss_pred             CCeECCCCCCccCChHHHHHHHH
Confidence            35778888888888888887774

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=91.55  E-value=0.074  Score=32.44  Aligned_cols=22  Identities=18%  Similarity=0.484  Sum_probs=20.3

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        46 ~~~C~~C~~~f~~~~~L~~H~~   67 (77)
T 2cot_A           46 PYKCDECGKAFIQRSHLIGHHR   67 (77)
T ss_dssp             SEECSSSCCEESSHHHHHHHGG
T ss_pred             CeeCCCCCCccCCHHHHHHHHH
Confidence            4889999999999999999984

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=91.50  E-value=0.07  Score=34.48  Aligned_cols=23  Identities=26%  Similarity=0.486  Sum_probs=20.6

Q ss_pred             CccccccCceecchhhHhhhhcc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHING   25 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlng   25 (124)
                      .|.|++|++.|.....|..|+..
T Consensus        65 ~~~C~~C~~~f~~~~~l~~H~~~   87 (110)
T 2csh_A           65 PYECNICAKRFMWRDSFHRHVTS   87 (110)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHH
T ss_pred             CeeCCCCcchhcCHHHHHHHHHH
Confidence            48899999999999999999854

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=91.47  E-value=0.091  Score=32.89  Aligned_cols=22  Identities=18%  Similarity=0.371  Sum_probs=17.2

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.+...|..|+.
T Consensus         8 ~~~C~~C~~~f~~~~~l~~H~~   29 (96)
T 2dmd_A            8 PHKCEVCGKCFSRKDKLKTHMR   29 (96)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGG
T ss_pred             CeECCCCCCccCCHHHHHHHHH
Confidence            4778888888888888888875

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=91.41  E-value=0.092  Score=32.32  Aligned_cols=24  Identities=17%  Similarity=0.331  Sum_probs=20.5

Q ss_pred             CCccccc--cCceecchhhHhhhhcc
Q psy7022           2 LGYYCNV--CDCVVKDSINFLDHING   25 (124)
Q Consensus         2 ~gfyC~v--Cd~~fkDs~~~ldHlng   25 (124)
                      +.|.|++  |+..|.....|..|+..
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~   29 (89)
T 2wbs_A            4 ATHTCDYAGCGKTYTKSSHLKAHLRT   29 (89)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHTT
T ss_pred             CCeeCCCCCCCCcCCCHHHHHHHHHh
Confidence            5788999  99999999999999863

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=91.35  E-value=0.073  Score=34.92  Aligned_cols=23  Identities=17%  Similarity=0.174  Sum_probs=20.6

Q ss_pred             CccccccCceecchhhHhhhhcc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHING   25 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlng   25 (124)
                      .|-|++|++.|.....|..|+..
T Consensus        28 ~h~C~~Cgk~F~~~~~L~~H~~~   50 (85)
T 2lv2_A           28 CHLCPVCGESFASKGAQERHLRL   50 (85)
T ss_dssp             TEECTTSCCEESSHHHHHHHHHT
T ss_pred             CEECCCCCCCcCcHHHHhhhhhh
Confidence            47899999999999999999853

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=91.28  E-value=0.077  Score=33.20  Aligned_cols=23  Identities=22%  Similarity=0.439  Sum_probs=20.3

Q ss_pred             CccccccCceecchhhHhhhhcc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHING   25 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlng   25 (124)
                      .|-|++|++.|.....|..|+..
T Consensus         3 ~~~C~~C~k~f~~~~~L~~H~~~   25 (88)
T 1llm_C            3 PFQCRICMRNFSRSDHLTTHIRT   25 (88)
T ss_dssp             CEECTTTCCEESCHHHHHHHHHH
T ss_pred             CCcCCCCCCccCCHHHHHHHHHH
Confidence            58899999999999999999863

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=90.91  E-value=0.09  Score=32.16  Aligned_cols=22  Identities=14%  Similarity=0.439  Sum_probs=20.3

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        47 ~~~C~~C~~~f~~~~~L~~H~~   68 (86)
T 1x6h_A           47 AFVCSKCGKTFTRRNTMARHAD   68 (86)
T ss_dssp             CEECSSSCCEESCHHHHHHHHH
T ss_pred             ceECCCCCChhCCHHHHHHHHH
Confidence            4899999999999999999984

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=90.87  E-value=0.09  Score=32.44  Aligned_cols=22  Identities=23%  Similarity=0.475  Sum_probs=20.2

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|.|++|+..|.....|..|+.
T Consensus        34 ~~~C~~C~~~f~~~~~l~~H~~   55 (90)
T 1a1h_A           34 PFQCRICMRNFSRSDHLTTHIR   55 (90)
T ss_dssp             CEECTTTCCEESCHHHHHHHHH
T ss_pred             CccCCCCCcccCCHHHHHHHHH
Confidence            5889999999999999999986

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=90.86  E-value=0.082  Score=33.82  Aligned_cols=22  Identities=18%  Similarity=0.274  Sum_probs=18.7

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|.|++|++.|.....|..|+.
T Consensus        73 ~~~C~~C~~~f~~~~~L~~H~~   94 (106)
T 2ee8_A           73 PFKCQECGKGFCQSRTLAVHKT   94 (106)
T ss_dssp             TTSCSSSCCCCSSHHHHHHHHH
T ss_pred             CeECCCcCCcccCHHHHHHHHH
Confidence            4789999999999999988874

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=90.40  E-value=0.094  Score=33.89  Aligned_cols=22  Identities=23%  Similarity=0.300  Sum_probs=19.3

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|.|++|++.|.....|..|+.
T Consensus        69 ~~~C~~C~~~f~~~~~L~~H~~   90 (107)
T 1wjp_A           69 KLTCLECMRTFKSSFSIWRHQV   90 (107)
T ss_dssp             GGEEGGGTEECSSHHHHHHHHH
T ss_pred             CccCccccchhCCHHHHHHHHH
Confidence            4889999999999999999874

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=90.35  E-value=0.11  Score=33.12  Aligned_cols=22  Identities=23%  Similarity=0.563  Sum_probs=18.9

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|.|++|++.|.....|..|+.
T Consensus        45 ~~~C~~C~~~f~~~~~l~~H~~   66 (106)
T 2ee8_A           45 PYTCDICHKAFRRQDHLRDHRY   66 (106)
T ss_dssp             CCBCSSSCCBCSCHHHHHHHGG
T ss_pred             CcCCCCccchhCCHHHHHHHHH
Confidence            4789999999999999998875

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=90.16  E-value=0.099  Score=33.77  Aligned_cols=23  Identities=17%  Similarity=0.496  Sum_probs=20.7

Q ss_pred             CccccccCceec-chhhHhhhhcc
Q psy7022           3 GYYCNVCDCVVK-DSINFLDHING   25 (124)
Q Consensus         3 gfyC~vCd~~fk-Ds~~~ldHlng   25 (124)
                      .|-|++|++.|. ....|..|+..
T Consensus        24 ~~~C~~C~k~f~~~~~~L~~H~~~   47 (98)
T 2gqj_A           24 EAVCPTCNVVTRKTLVGLKKHMEV   47 (98)
T ss_dssp             CCCCTTTCCCCSSCSHHHHHHHHH
T ss_pred             CcCCCCCCCChhhhHHHHHHHHHH
Confidence            589999999999 99999999853

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=90.07  E-value=0.13  Score=33.42  Aligned_cols=23  Identities=17%  Similarity=0.229  Sum_probs=18.1

Q ss_pred             CCccccccCceecchhhHhhhhc
Q psy7022           2 LGYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         2 ~gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      ..|-|++|++.|.+...|..|+.
T Consensus         6 ~~~~C~~C~~~f~~~~~l~~H~~   28 (124)
T 2dlq_A            6 SGVECPTCHKKFLSKYYLKVHNR   28 (124)
T ss_dssp             SSCCCTTTCCCCSSHHHHHHHHH
T ss_pred             CCCCCCCCCCcCCCHHHHHHHHH
Confidence            35778888888888888888874

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=89.96  E-value=0.12  Score=32.30  Aligned_cols=23  Identities=17%  Similarity=0.294  Sum_probs=20.8

Q ss_pred             CccccccCceecchhhHhhhhcc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHING   25 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlng   25 (124)
                      .|-|++|++.|.....|..|+..
T Consensus        31 ~~~C~~C~k~f~~~~~L~~H~~~   53 (88)
T 1llm_C           31 PFACDICGRKFARSDERKRHRDI   53 (88)
T ss_dssp             CEECTTTCCEESSHHHHHHHHHH
T ss_pred             CccCCCCCCccCCHHHHHHHHHH
Confidence            48899999999999999999853

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=89.78  E-value=0.12  Score=33.27  Aligned_cols=23  Identities=26%  Similarity=0.475  Sum_probs=20.4

Q ss_pred             CccccccCceecchhhHhhhhcc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHING   25 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlng   25 (124)
                      .|.|++|+..|.....|..|+..
T Consensus        37 ~~~C~~C~~~f~~~~~l~~H~~~   59 (110)
T 2csh_A           37 PYGCGVCGKKFKMKHHLVGHMKI   59 (110)
T ss_dssp             SEECTTTSCEESSSHHHHHHHTT
T ss_pred             CccCCCCCcccCCHHHHHHHHHH
Confidence            48899999999999999999863

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=89.54  E-value=0.12  Score=33.82  Aligned_cols=22  Identities=23%  Similarity=0.454  Sum_probs=18.8

Q ss_pred             CccccccCcee-cchhhHhhhhc
Q psy7022           3 GYYCNVCDCVV-KDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~f-kDs~~~ldHln   24 (124)
                      -|-|++|++.| .....|..|+.
T Consensus        34 ~~~C~~C~k~F~~~~~~L~~H~~   56 (96)
T 2ctd_A           34 SVSCPTCQAVGRKTIEGLKKHME   56 (96)
T ss_dssp             CEECTTTCSCEESSHHHHHHHHH
T ss_pred             CcCCCCCCCCcccCHHHHHHHHH
Confidence            47899999999 89999988874

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=89.27  E-value=0.16  Score=27.90  Aligned_cols=23  Identities=17%  Similarity=0.316  Sum_probs=20.3

Q ss_pred             Ccccc--ccCceecchhhHhhhhcc
Q psy7022           3 GYYCN--VCDCVVKDSINFLDHING   25 (124)
Q Consensus         3 gfyC~--vCd~~fkDs~~~ldHlng   25 (124)
                      .|-|.  +|++.|.....|..|+..
T Consensus        12 ~~~C~~~~C~k~f~~~~~L~~H~~~   36 (48)
T 2ent_A           12 PFACTWPGCGWRFSRSDELSRHRRS   36 (48)
T ss_dssp             CEECCSSSCCCEESSHHHHHHHHTT
T ss_pred             CeECCCCCCCCccCCHHHHHHHHHH
Confidence            48898  899999999999999853

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=89.21  E-value=0.14  Score=33.15  Aligned_cols=22  Identities=18%  Similarity=0.499  Sum_probs=19.7

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|.|++|++.|.....|..|+.
T Consensus        66 ~~~C~~C~~~f~~~~~l~~H~~   87 (124)
T 2dlq_A           66 VFTCSVCQETFRRRMELRLHMV   87 (124)
T ss_dssp             CEECSSSCCEESSHHHHHHHHH
T ss_pred             CeECCCCCCccCCHHHHHHHHH
Confidence            5889999999999999999984

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=89.14  E-value=0.14  Score=32.05  Aligned_cols=21  Identities=19%  Similarity=0.256  Sum_probs=19.5

Q ss_pred             ccccccCceecchhhHhhhhc
Q psy7022           4 YYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         4 fyC~vCd~~fkDs~~~ldHln   24 (124)
                      |-|++|++.|.....|..|+.
T Consensus        63 ~~C~~C~k~f~~~~~L~~H~~   83 (95)
T 2ej4_A           63 EECPREGKSFKAKYKLVNHIR   83 (95)
T ss_dssp             TTCSSTTCCCSSHHHHHHHHH
T ss_pred             cCCCCCCcccCCHHHHHHHHH
Confidence            789999999999999999985

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=89.14  E-value=0.15  Score=32.98  Aligned_cols=22  Identities=18%  Similarity=0.421  Sum_probs=20.2

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|.|++|+++|.+...|..|+.
T Consensus        66 ~~~C~~C~~~f~~~~~l~~H~~   87 (119)
T 2jp9_A           66 PFQCKTCQRKFSRSDHLKTHTR   87 (119)
T ss_dssp             CEECTTTCCEESCHHHHHHHHH
T ss_pred             CccCCccCchhCCHHHHHHHHH
Confidence            5889999999999999999985

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=88.96  E-value=0.16  Score=32.95  Aligned_cols=23  Identities=17%  Similarity=0.505  Sum_probs=20.7

Q ss_pred             CccccccCceecchhhHhhhhcc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHING   25 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlng   25 (124)
                      .|-|++|++.|.....|..|+..
T Consensus        19 ~~~C~~C~k~f~~~~~L~~H~~~   41 (115)
T 2dmi_A           19 KFRCKDCSAAYDTLVELTVHMNE   41 (115)
T ss_dssp             SEEBSSSSCEESSHHHHHHHHHH
T ss_pred             CEECCccCchhcCHHHHHHHHHH
Confidence            48899999999999999999864

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=88.74  E-value=0.17  Score=33.04  Aligned_cols=22  Identities=18%  Similarity=0.223  Sum_probs=19.0

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|.|++|+++|.+...|..|+.
T Consensus        34 ~~~C~~C~~~f~~~~~l~~H~~   55 (124)
T 1ubd_C           34 VHVCAECGKAFVESSKLKRHQL   55 (124)
T ss_dssp             CEECTTTCCEESSHHHHHHHGG
T ss_pred             CeECCCCCchhCCHHHHHHHHH
Confidence            4789999999999999999886

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=88.72  E-value=0.16  Score=35.42  Aligned_cols=21  Identities=29%  Similarity=0.485  Sum_probs=19.0

Q ss_pred             ccccccCceecchhhHhhhhc
Q psy7022           4 YYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         4 fyC~vCd~~fkDs~~~ldHln   24 (124)
                      |-|++|+++|.....|..|+.
T Consensus        23 y~C~~C~k~F~~~~~L~~H~~   43 (133)
T 2lt7_A           23 YICIVCKRSYVCLTSLRRHFN   43 (133)
T ss_dssp             EEETTTCCEESCHHHHHHHHH
T ss_pred             eECCCCCCCcCCHHHHHHHHH
Confidence            789999999999999999985

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=88.40  E-value=0.14  Score=28.66  Aligned_cols=22  Identities=27%  Similarity=0.472  Sum_probs=19.3

Q ss_pred             Ccccc--ccCceecchhhHhhhhc
Q psy7022           3 GYYCN--VCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~--vCd~~fkDs~~~ldHln   24 (124)
                      -|-|+  .|++.|.....+..|+.
T Consensus        18 ~~~C~~~~C~k~F~~~~~L~~H~~   41 (47)
T 1ncs_A           18 TFECLFPGCTKTFKRRYNIRSHIQ   41 (47)
T ss_dssp             EEECCCTTCCCEECSSSSHHHHHH
T ss_pred             CeECCCCCCCCccCCHHHHHHHHH
Confidence            47895  79999999999999974

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=88.25  E-value=0.18  Score=32.46  Aligned_cols=23  Identities=17%  Similarity=0.372  Sum_probs=20.3

Q ss_pred             CccccccCceecchhhHhhhhcc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHING   25 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlng   25 (124)
                      .|.|++|++.|.+...|..|+..
T Consensus        16 ~~~C~~C~~~f~~~~~l~~H~~~   38 (107)
T 1wjp_A           16 VYQCRLCNAKLSSLLEQGSHERL   38 (107)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CeECCCCCCccCCHHHHHHHHHH
Confidence            48899999999999999999864

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=88.15  E-value=0.19  Score=32.85  Aligned_cols=22  Identities=27%  Similarity=0.744  Sum_probs=20.3

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        25 py~C~~C~k~F~~~~~L~~H~~   46 (88)
T 1x6f_A           25 TYQCKHCDSKLQSTAELTSHLN   46 (88)
T ss_dssp             CEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcCCCCCCEeCCHHHHHHHHH
Confidence            4889999999999999999985

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=88.03  E-value=0.19  Score=33.39  Aligned_cols=23  Identities=22%  Similarity=0.496  Sum_probs=20.8

Q ss_pred             CccccccCceecchhhHhhhhcc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHING   25 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlng   25 (124)
                      .|-|++|++.|.....|..|+..
T Consensus        74 ~~~C~~C~k~f~~~~~l~~H~~~   96 (129)
T 2wbt_A           74 QFVCPLCLMPFSSSVSLKQHIRY   96 (129)
T ss_dssp             SEECTTTCCEESSHHHHHHHHHH
T ss_pred             CeECCCCCcccCCHhHHHHHHHH
Confidence            58899999999999999999854

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=87.77  E-value=0.19  Score=32.94  Aligned_cols=21  Identities=14%  Similarity=0.414  Sum_probs=19.3

Q ss_pred             CccccccCceecchhhHhhhh
Q psy7022           3 GYYCNVCDCVVKDSINFLDHI   23 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHl   23 (124)
                      -|-|.+|++.|.....|..|+
T Consensus        62 ~~~C~~Cgk~F~~~~~L~~H~   82 (96)
T 2ctd_A           62 MFTCHHCGKQLRSLAGMKYHV   82 (96)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHH
T ss_pred             CeECCCCCCeeCCHHHHHHHh
Confidence            488999999999999999993

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=87.66  E-value=0.17  Score=30.06  Aligned_cols=21  Identities=14%  Similarity=0.294  Sum_probs=15.5

Q ss_pred             Ccccc-ccCceecchhhHhhhh
Q psy7022           3 GYYCN-VCDCVVKDSINFLDHI   23 (124)
Q Consensus         3 gfyC~-vCd~~fkDs~~~ldHl   23 (124)
                      -|-|+ +|++.|.....|..|+
T Consensus        36 p~~C~~~C~k~f~~~~~L~~H~   57 (66)
T 2eod_A           36 PVACPNQCGVGTVAREDLPGHL   57 (66)
T ss_dssp             EEECTTCCSCCEEETTTHHHHH
T ss_pred             CccCCcccCcccccHHHHHHHH
Confidence            36677 7887777777777776

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=87.47  E-value=0.23  Score=29.67  Aligned_cols=22  Identities=18%  Similarity=0.300  Sum_probs=19.8

Q ss_pred             Cccccc--cCceecchhhHhhhhc
Q psy7022           3 GYYCNV--CDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~v--Cd~~fkDs~~~ldHln   24 (124)
                      .|.|++  |++.|.....|..|+.
T Consensus        17 ~~~C~~~~C~k~f~~~~~L~~H~~   40 (72)
T 2epa_A           17 SHICSHPGCGKTYFKSSHLKAHTR   40 (72)
T ss_dssp             CEECSSTTTCCEESSHHHHHHHHH
T ss_pred             ceeCCCCCCccccCCHHHHHHHHH
Confidence            588988  9999999999999984

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=87.18  E-value=0.23  Score=33.53  Aligned_cols=21  Identities=33%  Similarity=0.626  Sum_probs=17.2

Q ss_pred             CccccccCceecchhhHhhhh
Q psy7022           3 GYYCNVCDCVVKDSINFLDHI   23 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHl   23 (124)
                      .|-|++|++.|.....|..|+
T Consensus        18 py~C~~Cgk~F~~~~~L~~H~   38 (102)
T 2ghf_A           18 GYECKYCTFQTPDLNMFTFHV   38 (102)
T ss_dssp             SEECSSCSCEESCHHHHHHHH
T ss_pred             CcCCCCCCCccCCHHHHHHHH
Confidence            477888888888888888876

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=86.95  E-value=0.24  Score=29.38  Aligned_cols=21  Identities=14%  Similarity=0.108  Sum_probs=18.6

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      -|-|+.|++.|. ...|..|+.
T Consensus        10 ~~~C~~C~k~f~-~~~L~~H~~   30 (66)
T 2eod_A           10 TQPCTYCTKEFV-FDTIQSHQY   30 (66)
T ss_dssp             EEECSSSCCEEE-HHHHHHHHH
T ss_pred             CeeccccCCccC-HHHHHHHHH
Confidence            478999999999 999999974

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=86.91  E-value=0.23  Score=34.48  Aligned_cols=22  Identities=23%  Similarity=0.389  Sum_probs=19.4

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        78 ~~~C~~C~k~F~~~~~L~~H~~   99 (133)
T 2lt7_A           78 RYQCLACGKSFINYQFMSSHIK   99 (133)
T ss_dssp             CEEESSSCCEESSHHHHHHHHH
T ss_pred             cccCCCCCCCcCCHHHHHHHhH
Confidence            4889999999999999999984

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=86.84  E-value=0.26  Score=29.69  Aligned_cols=22  Identities=14%  Similarity=0.419  Sum_probs=19.6

Q ss_pred             Cccccc--cCceecchhhHhhhhc
Q psy7022           3 GYYCNV--CDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~v--Cd~~fkDs~~~ldHln   24 (124)
                      .|-|++  |++.|.....|..|+.
T Consensus        38 ~~~C~~~~C~k~f~~~~~L~~H~~   61 (79)
T 2dlk_A           38 SFSCPEPACGKSFNFKKHLKEHMK   61 (79)
T ss_dssp             CEECSCTTTCCEESSHHHHHHHHH
T ss_pred             CeECCCCCCcCccCCHHHHHHHHH
Confidence            478998  9999999999999985

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=86.34  E-value=0.29  Score=29.19  Aligned_cols=22  Identities=18%  Similarity=0.359  Sum_probs=19.5

Q ss_pred             Cccccc--cCceecchhhHhhhhc
Q psy7022           3 GYYCNV--CDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~v--Cd~~fkDs~~~ldHln   24 (124)
                      -|-|++  |++.|.....|..|+.
T Consensus        47 ~~~C~~~~C~k~f~~~~~l~~H~~   70 (72)
T 2epa_A           47 PFSCSWKGCERRFARSDELSRHRR   70 (72)
T ss_dssp             SEECCCTTCCCEESSHHHHHHHTT
T ss_pred             CccCCCCCCCcccCCHHHHHhHhh
Confidence            488976  9999999999999974

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=86.25  E-value=0.3  Score=29.14  Aligned_cols=22  Identities=32%  Similarity=0.539  Sum_probs=19.7

Q ss_pred             Ccccc--ccCceecchhhHhhhhc
Q psy7022           3 GYYCN--VCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~--vCd~~fkDs~~~ldHln   24 (124)
                      .|-|+  .|++.|.....|..|+.
T Consensus        19 ~~~C~~~~C~k~f~~~~~l~~H~~   42 (73)
T 1f2i_G           19 PYACPVESCDRRFSRSDELTRHIR   42 (73)
T ss_dssp             CEECSSTTBCCEESSHHHHHHHHH
T ss_pred             ccCCcCCCCCCccCCHHHHHHHHH
Confidence            58897  59999999999999985

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=85.80  E-value=0.27  Score=33.15  Aligned_cols=20  Identities=25%  Similarity=0.579  Sum_probs=19.0

Q ss_pred             CccccccCceecchhhHhhh
Q psy7022           3 GYYCNVCDCVVKDSINFLDH   22 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldH   22 (124)
                      .|-|++|++.|.....|..|
T Consensus        50 pf~C~~Cgk~F~~~~~L~~H   69 (102)
T 2ghf_A           50 SYVCVECNFLTKRYDALSEH   69 (102)
T ss_dssp             CEEETTTTEEESSTHHHHTH
T ss_pred             CcCCCCCCcccCCHHHHHHH
Confidence            48999999999999999999

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=85.60  E-value=0.3  Score=29.44  Aligned_cols=21  Identities=24%  Similarity=0.403  Sum_probs=17.4

Q ss_pred             ccc--cccCceecchhhHhhhhc
Q psy7022           4 YYC--NVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         4 fyC--~vCd~~fkDs~~~ldHln   24 (124)
                      |-|  ++|+..|.....|..|+.
T Consensus         2 ~~C~~~~C~~~f~~~~~l~~H~~   24 (85)
T 2j7j_A            2 YVCHFENCGKAFKKHNQLKVHQF   24 (85)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHH
T ss_pred             ccCCCCCCCcccCCHHHHHHHHH
Confidence            678  888888888888888874

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=85.35  E-value=0.34  Score=30.32  Aligned_cols=22  Identities=27%  Similarity=0.540  Sum_probs=19.8

Q ss_pred             Cccccc--cCceecchhhHhhhhc
Q psy7022           3 GYYCNV--CDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~v--Cd~~fkDs~~~ldHln   24 (124)
                      .|.|.+  |+++|.....|..|+.
T Consensus        15 ~~~C~~~~C~~~f~~~~~l~~H~~   38 (100)
T 2ebt_A           15 IHYCDYPGCTKVYTKSSHLKAHLR   38 (100)
T ss_dssp             CEECCSSSCCCEESCHHHHHHHHH
T ss_pred             ceEcCCCCCCCcccCHHHHHHHHH
Confidence            588997  9999999999999986

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=85.30  E-value=0.31  Score=33.13  Aligned_cols=22  Identities=14%  Similarity=0.265  Sum_probs=19.2

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|.|++|+++|.+...|..|+.
T Consensus        25 ~~~C~~C~~~f~~~~~L~~H~~   46 (155)
T 2rpc_A           25 SRPKKSCDRTFSTMHELVTHVT   46 (155)
T ss_dssp             SSSCCCCCCCBSSHHHHHHHHH
T ss_pred             ccccccCCcccCCHHHHHHHHH
Confidence            5789999999999999999875

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=85.27  E-value=0.35  Score=29.14  Aligned_cols=22  Identities=23%  Similarity=0.339  Sum_probs=19.8

Q ss_pred             Cccccc--cCceecchhhHhhhhc
Q psy7022           3 GYYCNV--CDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~v--Cd~~fkDs~~~ldHln   24 (124)
                      -|-|++  |++.|.+...|..|+.
T Consensus        31 ~~~C~~~~C~~~f~~~~~l~~H~~   54 (85)
T 2j7j_A           31 PYECPHEGCDKRFSLPSRLKRHEK   54 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHH
T ss_pred             CeeCCCCCCcCccCCHHHHHHHHH
Confidence            478988  9999999999999984

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=85.04  E-value=0.44  Score=28.59  Aligned_cols=23  Identities=17%  Similarity=0.443  Sum_probs=20.4

Q ss_pred             CCccccc--cCceecchhhHhhhhc
Q psy7022           2 LGYYCNV--CDCVVKDSINFLDHIN   24 (124)
Q Consensus         2 ~gfyC~v--Cd~~fkDs~~~ldHln   24 (124)
                      ..|-|+.  |+++|.....|..|+.
T Consensus         6 ~~~~C~~~~C~~~f~~~~~L~~H~~   30 (79)
T 2dlk_A            6 SGMPCDFPGCGRIFSNRQYLNHHKK   30 (79)
T ss_dssp             SSEECSSTTTCCEESSHHHHHHHHH
T ss_pred             CCccCCCCCCcCccCCHHHHHHHHH
Confidence            3588887  9999999999999985

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=85.00  E-value=0.41  Score=29.81  Aligned_cols=22  Identities=14%  Similarity=0.265  Sum_probs=19.6

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|+++|.....|..|+.
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~   46 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVT   46 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHH
T ss_pred             CCcccccccccCCHHHHHHHHH
Confidence            3569999999999999999985

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=83.80  E-value=0.38  Score=32.48  Aligned_cols=23  Identities=17%  Similarity=0.307  Sum_probs=20.2

Q ss_pred             CccccccCceecchhhHhhhhcc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHING   25 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlng   25 (124)
                      .|-|++|+++|.+...|..|+..
T Consensus         3 ~~~C~~C~~~f~~~~~L~~H~~~   25 (155)
T 2gli_A            3 DCRWDGCSQEFDSQEQLVHHINS   25 (155)
T ss_dssp             BCCBTTCCCBCSCHHHHHHHHHH
T ss_pred             cCCcCCCccccCCHHHHHHHHHh
Confidence            47799999999999999999863

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=83.21  E-value=0.48  Score=30.86  Aligned_cols=24  Identities=17%  Similarity=0.369  Sum_probs=20.9

Q ss_pred             CCcccc--ccCceecchhhHhhhhcc
Q psy7022           2 LGYYCN--VCDCVVKDSINFLDHING   25 (124)
Q Consensus         2 ~gfyC~--vCd~~fkDs~~~ldHlng   25 (124)
                      ..|-|+  .|+.+|.+...|..|+..
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~   29 (124)
T 1ubd_C            4 RTIACPHKGCTKMFRDNSAMRKHLHT   29 (124)
T ss_dssp             -CEECCSTTCCCEESSHHHHHHHHGG
T ss_pred             CcccCCCCCCcCccCCHHHHHHHHHH
Confidence            368899  899999999999999963

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=82.78  E-value=0.47  Score=33.42  Aligned_cols=22  Identities=23%  Similarity=0.383  Sum_probs=19.8

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|.|++|++.|.+...|..|+.
T Consensus       133 ~~~C~~C~~~f~~~~~L~~H~~  154 (190)
T 2i13_A          133 PYKCPECGKSFSREDNLHTHQR  154 (190)
T ss_dssp             CEECTTTCCEESCHHHHHHHHH
T ss_pred             CeECCCCCcccCCHHHHHHHHH
Confidence            4889999999999999999985

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=82.32  E-value=0.092  Score=31.01  Aligned_cols=24  Identities=8%  Similarity=0.057  Sum_probs=19.8

Q ss_pred             CCccccccCceecchhhHhhhhcc
Q psy7022           2 LGYYCNVCDCVVKDSINFLDHING   25 (124)
Q Consensus         2 ~gfyC~vCd~~fkDs~~~ldHlng   25 (124)
                      ..|-|++|++.|.....|..|+..
T Consensus        38 ~~~~C~~C~~~f~~~~~l~~H~~~   61 (73)
T 2ctu_A           38 KTPMCEKCRKDSCQEAALNKDEGN   61 (73)
T ss_dssp             SSCCCHHHHHTCSCCCSSCCCSSC
T ss_pred             CCCCCCCCChhhcCHHHHHHHHHh
Confidence            357899999999999999998753

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=82.16  E-value=0.49  Score=32.09  Aligned_cols=21  Identities=19%  Similarity=0.256  Sum_probs=19.1

Q ss_pred             ccccccCceecchhhHhhhhc
Q psy7022           4 YYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         4 fyC~vCd~~fkDs~~~ldHln   24 (124)
                      |-|++|+++|.+...|..|+.
T Consensus        63 ~~C~~C~~~f~~~~~l~~H~~   83 (155)
T 2rpc_A           63 EECPREGKSFKAKYKLVNHIR   83 (155)
T ss_dssp             TTCTTSSCCCSSHHHHHHHTH
T ss_pred             cCCCCcccccCCHHHHHHHHH
Confidence            679999999999999999986

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=81.42  E-value=0.56  Score=33.00  Aligned_cols=22  Identities=23%  Similarity=0.463  Sum_probs=18.0

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|.|++|+.+|.+...|..|+.
T Consensus        49 ~~~C~~C~~~f~~~~~l~~H~~   70 (190)
T 2i13_A           49 PYKCPECGKSFSDKKDLTRHQR   70 (190)
T ss_dssp             CEECTTTCCEESSHHHHHHHHH
T ss_pred             CccCCCcCchhCCHHHHHHHHH
Confidence            4778888888888888888875

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	124
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	98.73
d2vrda1	61	Spliceosomal protein U1C {Human (Homo sapiens) [Ta	98.14
d1zu1a2	55	dsRNA-binding protein ZFa (ZNF346, JAZ) {African c	97.66
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	96.05
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	95.77
d1fu9a_	36	U-shaped transcription factor, different fingers {	95.69
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	95.66
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	95.66
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	95.5
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	95.36
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.24
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	95.02
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	95.01
d1zu1a1	72	dsRNA-binding protein ZFa (ZNF346, JAZ) {African c	94.93
d2yrka1	48	Zinc finger homeobox protein 4, ZFHX4 {Human (Homo	94.91
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	94.88
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	94.7
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	94.37
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	93.81
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	93.53
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	93.24
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	92.98
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	92.49
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	92.36
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	91.79
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	91.37
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	90.59
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	90.31
d1y0jb1	36	U-shaped transcription factor, different fingers {	89.06
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	88.97
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	88.94
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	88.4
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	88.21
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	87.65
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	86.89
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	86.68
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	86.4
d2ghfa2	36	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	86.04
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	83.63
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	82.6
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	80.95
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	80.49
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	80.11

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.73  E-value=1.7e-09  Score=69.99  Aligned_cols=30  Identities=27%  Similarity=0.374  Sum_probs=28.0

Q ss_pred             CCccccccCceecchhhHhhhhccHHHHHH
Q psy7022           2 LGYYCNVCDCVVKDSINFLDHINGKKHQRN   31 (124)
Q Consensus         2 ~gfyC~vCd~~fkDs~~~ldHlngk~H~~~   31 (124)
                      +-|||.+|+++|.+..+|.+|++|++|.++
T Consensus        14 gqfYCv~C~K~F~se~~l~~H~ksKkHKrr   43 (67)
T d1zr9a1          14 GLHRCLACARYFIDSTNLKTHFRSKDHKKR   43 (67)
T ss_dssp             GCSEETTTTEECSSHHHHHHHTTCHHHHHH
T ss_pred             CEEecccccCccCCHHHHHHHHcccHHHHH
Confidence            569999999999999999999999999873

>d2vrda1 g.37.1.4 (A:1-61) Spliceosomal protein U1C {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Spliceosomal protein U1C
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.14  E-value=4.3e-07  Score=57.46  Aligned_cols=32  Identities=38%  Similarity=0.777  Sum_probs=27.6

Q ss_pred             CCCccccccCceec-chhh-HhhhhccHHHHHHh
Q psy7022           1 MLGYYCNVCDCVVK-DSIN-FLDHINGKKHQRNL   32 (124)
Q Consensus         1 ~~gfyC~vCd~~fk-Ds~~-~ldHlngk~H~~~~   32 (124)
                      ++.|||+.||++|. ||.+ -..|++|.+|+.|.
T Consensus         1 MpryyCdYC~~~lt~ds~s~RK~H~~G~kH~~n~   34 (61)
T d2vrda1           1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENV   34 (61)
T ss_dssp             CCSCEETTTTEECSCCSHHHHHHHTCCTHHHHHH
T ss_pred             CCchhhhhhcchhccCChhHHHHHhccHHHHHHH
Confidence            57899999999996 6665 57899999999975

>d1zu1a2 g.37.1.4 (A:74-128) dsRNA-binding protein ZFa (ZNF346, JAZ) {African clawed frog (Xenopus laevis) [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: dsRNA-binding protein ZFa (ZNF346, JAZ)
species: African clawed frog (Xenopus laevis) [TaxId: 8355]

Probab=97.66  E-value=9.2e-06  Score=50.25  Aligned_cols=30  Identities=30%  Similarity=0.545  Sum_probs=27.9

Q ss_pred             CccccccCceecchhhHhhhhccHHHHHHh
Q psy7022           3 GYYCNVCDCVVKDSINFLDHINGKKHQRNL   32 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlngk~H~~~~   32 (124)
                      .-||.+|+.||.+..+...|..|+.|.+++
T Consensus        21 nk~C~lCn~~Fns~~~AqsHY~GK~H~K~l   50 (55)
T d1zu1a2          21 SKCCPVCNMTFSSPVVAESHYIGKTHIKNL   50 (55)
T ss_dssp             TTEETTTTEECSSHHHHHHHHTSHHHHHHH
T ss_pred             hhhhhhhhcccCCHHHHHHHhhhhHHHHHH
Confidence            469999999999999999999999999865

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.05  E-value=0.0011  Score=35.21  Aligned_cols=22  Identities=23%  Similarity=0.475  Sum_probs=20.1

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|..+..+..|+-
T Consensus         3 Py~C~~C~k~F~~~~~L~~H~r   24 (28)
T d1a1ia2           3 PFQCRICMRNFSRSDHLTTHIR   24 (28)
T ss_dssp             CEECTTTCCEESCHHHHHHHHH
T ss_pred             CccCCCCcCEecccccccccCC
Confidence            5889999999999999999973

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.77  E-value=0.0017  Score=36.07  Aligned_cols=22  Identities=18%  Similarity=0.540  Sum_probs=20.5

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|..+..+..|+.
T Consensus         7 Py~C~~C~k~F~~~~~L~~H~r   28 (35)
T d1srka_           7 PFVCRICLSAFTTKANCARHLK   28 (35)
T ss_dssp             CEECSSSCCEESSHHHHHHHHG
T ss_pred             cccCCCCCCcccChHHHHHHcc
Confidence            5899999999999999999984

>d1fu9a_ g.37.1.2 (A:) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=95.69  E-value=0.0016  Score=36.66  Aligned_cols=22  Identities=27%  Similarity=0.638  Sum_probs=19.5

Q ss_pred             CCccccccCceecchhhHhhhh
Q psy7022           2 LGYYCNVCDCVVKDSINFLDHI   23 (124)
Q Consensus         2 ~gfyC~vCd~~fkDs~~~ldHl   23 (124)
                      .+=||..||++|..-..|+.|-
T Consensus         7 ~~rYC~~CDI~Fn~~~T~~aHK   28 (36)
T d1fu9a_           7 MKKYCSTCDISFNYVKTYLAHK   28 (36)
T ss_dssp             CCSEETTTTEECSSHHHHHHHH
T ss_pred             hhhHHhhCCceehhHHHHHHHH
Confidence            3569999999999999999984

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.66  E-value=0.002  Score=33.80  Aligned_cols=21  Identities=19%  Similarity=0.498  Sum_probs=19.2

Q ss_pred             CccccccCceecchhhHhhhh
Q psy7022           3 GYYCNVCDCVVKDSINFLDHI   23 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHl   23 (124)
                      -|-|..|++.|..++.|+.|.
T Consensus         2 Py~C~eCgK~F~~~s~L~~Hq   22 (26)
T d1x6ea2           2 PYKCLECGKAFSQNSGLINHQ   22 (26)
T ss_dssp             CEECSSSCCEESSHHHHHHHH
T ss_pred             CccCCCCcCeeccCcccccCc
Confidence            478999999999999999985

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.66  E-value=0.0018  Score=34.57  Aligned_cols=22  Identities=23%  Similarity=0.391  Sum_probs=20.2

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|..++.|..|+-
T Consensus         2 py~C~~C~k~F~~~s~L~~H~r   23 (29)
T d1sp1a_           2 KFACPECPKRFMRSDHLSKHIK   23 (29)
T ss_dssp             CSCCTTTTCCCSCSHHHHHHHH
T ss_pred             CEECCcCCCeecchHHhhhhcC
Confidence            4889999999999999999974

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=95.50  E-value=0.0024  Score=33.93  Aligned_cols=22  Identities=18%  Similarity=0.499  Sum_probs=20.1

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|..+..+..|+.
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~r   23 (29)
T d2adra1           2 SFVCEVCTRAFARQEHLKRHYR   23 (29)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHH
T ss_pred             cCCCCCCCCCCCCchHcccccC
Confidence            4889999999999999999984

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.36  E-value=0.0029  Score=35.08  Aligned_cols=23  Identities=26%  Similarity=0.420  Sum_probs=20.8

Q ss_pred             CccccccCceecchhhHhhhhcc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHING   25 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlng   25 (124)
                      -|-|++|++.|..+.++..|+..
T Consensus         8 P~~C~~C~k~F~~~~~L~~H~~~   30 (36)
T d2ct1a2           8 PYECYICHARFTQSGTMKMHILQ   30 (36)
T ss_dssp             SEECTTTCCEESCHHHHHHHHHH
T ss_pred             CEeCCCCcccccchHHHHHHccc
Confidence            58999999999999999999753

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.24  E-value=0.0033  Score=35.57  Aligned_cols=22  Identities=23%  Similarity=0.453  Sum_probs=20.2

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      -|-|+.|++.|..+..|..|+.
T Consensus         5 py~C~~Cgk~F~~~~~L~~H~r   26 (39)
T d2epsa1           5 PYICQSCGKGFSRPDHLNGHIK   26 (39)
T ss_dssp             CEECSSSCCEESSHHHHHHHHH
T ss_pred             CccCCCCCCCcCChHHhhccCc
Confidence            5899999999999999999974

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.02  E-value=0.0043  Score=33.91  Aligned_cols=22  Identities=23%  Similarity=0.381  Sum_probs=20.0

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|.+|++.|...+.|..|..
T Consensus         7 py~C~~Cgk~F~~~~~L~~H~r   28 (33)
T d1x6ea1           7 PYGCVECGKAFSRSSILVQHQR   28 (33)
T ss_dssp             CEECSSSCCEESSHHHHHHHHH
T ss_pred             CeeCCCCCCEeCchHHhHhhcc
Confidence            5899999999999999999863

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.01  E-value=0.0042  Score=34.56  Aligned_cols=22  Identities=23%  Similarity=0.483  Sum_probs=20.1

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|..+++|..|.-
T Consensus        12 py~C~~CgK~F~~~s~L~~H~r   33 (38)
T d2cota2          12 RYKCDECGKSFSHSSDLSKHRR   33 (38)
T ss_dssp             SSBCSSSCCBCSCHHHHHHHHT
T ss_pred             CEecCCCCceeeCHHHHHHhCc
Confidence            5889999999999999999973

>d1zu1a1 g.37.1.4 (A:2-73) dsRNA-binding protein ZFa (ZNF346, JAZ) {African clawed frog (Xenopus laevis) [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: dsRNA-binding protein ZFa (ZNF346, JAZ)
species: African clawed frog (Xenopus laevis) [TaxId: 8355]

Probab=94.93  E-value=0.0054  Score=39.11  Aligned_cols=29  Identities=28%  Similarity=0.560  Sum_probs=27.0

Q ss_pred             ccccccCceecchhhHhhhhccHHHHHHh
Q psy7022           4 YYCNVCDCVVKDSINFLDHINGKKHQRNL   32 (124)
Q Consensus         4 fyC~vCd~~fkDs~~~ldHlngk~H~~~~   32 (124)
                      -||.||+.++-..++-+.|--|++|..++
T Consensus        33 ~~CkvC~a~L~seSQriaHYeskkHa~kv   61 (72)
T d1zu1a1          33 TQCKVCSAVLISESQKLAHYQSRKHANKV   61 (72)
T ss_dssp             SEETTTTEECCSHHHHHHHHHCHHHHHHH
T ss_pred             hhHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            48999999999999999999999998864

>d2yrka1 g.37.1.4 (A:8-55) Zinc finger homeobox protein 4, ZFHX4 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger homeobox protein 4, ZFHX4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.91  E-value=0.0049  Score=36.61  Aligned_cols=32  Identities=22%  Similarity=0.397  Sum_probs=28.2

Q ss_pred             CccccccCceecchhhHhhhhccHHHHHHhcc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHINGKKHQRNLGM   34 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlngk~H~~~~G~   34 (124)
                      +--|.+|+.-|...++.-|||-+++|+.++-+
T Consensus         6 ~~eC~lC~vKYs~~~SvrdHiFskqHI~~Vk~   37 (48)
T d2yrka1           6 KPECTLCGVKYSARLSIRDHIFSKQHISKVRE   37 (48)
T ss_dssp             CSCCTTTTCCCCSSSCHHHHHTSHHHHHHHHH
T ss_pred             cccCcccceeeeeecchHhhhhhHHHHHHHHH
Confidence            34699999999999999999999999986543

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.88  E-value=0.0028  Score=33.81  Aligned_cols=27  Identities=30%  Similarity=0.663  Sum_probs=25.0

Q ss_pred             ccccccCceecchhhHhhhhccHHHHH
Q psy7022           4 YYCNVCDCVVKDSINFLDHINGKKHQR   30 (124)
Q Consensus         4 fyC~vCd~~fkDs~~~ldHlngk~H~~   30 (124)
                      |-|..|+-.|+..-++..|+.|+.|.+
T Consensus         2 y~C~~CnF~FKTKGNLTKHmkSKaH~k   28 (29)
T d1bboa2           2 YHCTYCNFSFKTKGNLTKHMKSKAHSK   28 (29)
T ss_dssp             EECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             cccceeeeeEeeccchhHhhhhhhhcc
Confidence            789999999999999999999998853

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.70  E-value=0.0058  Score=33.68  Aligned_cols=22  Identities=23%  Similarity=0.448  Sum_probs=20.2

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      -|-|++|++.|..+..|..|+.
T Consensus         8 Py~C~~C~k~F~~~~~L~~H~r   29 (36)
T d1x6ha2           8 PYACSHCDKTFRQKQLLDMHFK   29 (36)
T ss_dssp             CEECSSSSCEESSHHHHHHHHH
T ss_pred             CEECCCCCCCcCCHhHHHHhCc
Confidence            5889999999999999999983

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.37  E-value=0.0073  Score=33.38  Aligned_cols=22  Identities=23%  Similarity=0.353  Sum_probs=20.4

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      -|-|+.|++.|..+..|..|+.
T Consensus        11 Py~C~~C~k~F~~~~~L~~H~r   32 (37)
T d1p7aa_          11 PFQCPDCDRSFSRSDHLALHRK   32 (37)
T ss_dssp             SBCCTTTCCCBSSHHHHHHHHG
T ss_pred             CeEeCCCCCEecCHHHHHHHHh
Confidence            5899999999999999999974

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.81  E-value=0.012  Score=31.40  Aligned_cols=22  Identities=18%  Similarity=0.477  Sum_probs=20.1

Q ss_pred             Cccccc--cCceecchhhHhhhhc
Q psy7022           3 GYYCNV--CDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~v--Cd~~fkDs~~~ldHln   24 (124)
                      .|.|++  |++.|..+..+..|+.
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r   25 (30)
T d1ubdc3           2 PFQCTFEGCGKRFSLDFNLRTHVR   25 (30)
T ss_dssp             CEECCSTTCCCEESCHHHHHHHHH
T ss_pred             CccCCCCCCCceECcHHHcCcccc
Confidence            489988  9999999999999984

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=93.53  E-value=0.015  Score=32.68  Aligned_cols=26  Identities=19%  Similarity=0.471  Sum_probs=22.8

Q ss_pred             CCccccccCceecchhhHhhhhccHH
Q psy7022           2 LGYYCNVCDCVVKDSINFLDHINGKK   27 (124)
Q Consensus         2 ~gfyC~vCd~~fkDs~~~ldHlngk~   27 (124)
                      ..|.|.+|++.|.+..++=.|.+...
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr   29 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHR   29 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTC
T ss_pred             CccCCCCCCCccCCcccccchHhhhc
Confidence            46899999999999999999987643

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.24  E-value=0.014  Score=31.17  Aligned_cols=24  Identities=38%  Similarity=0.664  Sum_probs=21.8

Q ss_pred             CccccccCceecchhhHhhhhccH
Q psy7022           3 GYYCNVCDCVVKDSINFLDHINGK   26 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlngk   26 (124)
                      .|-|+.|+-..-||+++..||.++
T Consensus         2 py~cqyc~yrsadssnlkthiktk   25 (30)
T d1klra_           2 TYQCQYCEFRSADSSNLKTHIKTK   25 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHH
T ss_pred             Cccccccccccccchhhhhhhhcc
Confidence            488999999999999999999765

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.98  E-value=0.02  Score=30.96  Aligned_cols=23  Identities=22%  Similarity=0.553  Sum_probs=20.6

Q ss_pred             Cccccc--cCceecchhhHhhhhcc
Q psy7022           3 GYYCNV--CDCVVKDSINFLDHING   25 (124)
Q Consensus         3 gfyC~v--Cd~~fkDs~~~ldHlng   25 (124)
                      -|.|++  |++.|..+..+..|+..
T Consensus         3 P~~C~~pgC~k~F~r~~~L~~H~r~   27 (32)
T d1zfda_           3 PYSCDHPGCDKAFVRNHDLIRHKKS   27 (32)
T ss_dssp             SBCCCCTTCCCCBSSSHHHHHHHGG
T ss_pred             CeECcCCCCCCeeCCHHHHHHHhhh
Confidence            589999  99999999999999753

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.49  E-value=0.025  Score=29.92  Aligned_cols=22  Identities=36%  Similarity=0.670  Sum_probs=19.7

Q ss_pred             Cccccc--cCceecchhhHhhhhc
Q psy7022           3 GYYCNV--CDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~v--Cd~~fkDs~~~ldHln   24 (124)
                      .|.|++  |++.|..+..+..|+-
T Consensus         2 p~~C~~~gC~k~F~~~~~L~~H~r   25 (29)
T d1a1ia1           2 PYACPVESCDRRFSRSADLTRHIR   25 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHTH
T ss_pred             CeECCCCCCCcEECchhHhhhhcC
Confidence            488988  9999999999999973

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.36  E-value=0.024  Score=30.17  Aligned_cols=22  Identities=18%  Similarity=0.309  Sum_probs=19.9

Q ss_pred             Cccccc--cCceecchhhHhhhhc
Q psy7022           3 GYYCNV--CDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~v--Cd~~fkDs~~~ldHln   24 (124)
                      -|-|++  |++.|..+..+..|+.
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r   25 (30)
T d2glia3           2 PHKCTFEGCRKSYSRLENLKTHLR   25 (30)
T ss_dssp             CCCCCSTTCCCCCSSHHHHHHHHH
T ss_pred             CeeCCCCCCCceECChhHhhhhcC
Confidence            488999  9999999999999984

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.79  E-value=0.031  Score=32.08  Aligned_cols=22  Identities=27%  Similarity=0.564  Sum_probs=18.1

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      .|-|++|++.|.....|..|+.
T Consensus        30 py~C~~C~k~F~~~~~L~~H~r   51 (53)
T d2csha1          30 PYGCGVCGKKFKMKHHLVGHMK   51 (53)
T ss_dssp             SEECTTTSCEESSSHHHHHHHT
T ss_pred             CCcCCCcCCEecCHHHHHHHHh
Confidence            4778888888888888888864

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.37  E-value=0.026  Score=29.68  Aligned_cols=22  Identities=32%  Similarity=0.582  Sum_probs=19.8

Q ss_pred             Cccccc--cCceecchhhHhhhhc
Q psy7022           3 GYYCNV--CDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~v--Cd~~fkDs~~~ldHln   24 (124)
                      -|.|+.  |++.|..+..+..|+.
T Consensus         2 Pf~C~~~gC~K~F~~~~~L~~H~r   25 (28)
T d1ubdc4           2 PYVCPFDGCNKKFAQSTNLKSHIL   25 (28)
T ss_dssp             CCCCCSTTCCCCCSSTTTTHHHHH
T ss_pred             CcCCCCCCcCCcCCCHHHHHHHHh
Confidence            488999  9999999999999974

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.59  E-value=0.054  Score=29.68  Aligned_cols=22  Identities=18%  Similarity=0.472  Sum_probs=17.9

Q ss_pred             ccccccCceecchhhHhhhhcc
Q psy7022           4 YYCNVCDCVVKDSINFLDHING   25 (124)
Q Consensus         4 fyC~vCd~~fkDs~~~ldHlng   25 (124)
                      .-|+.|++.|+|..-+..|--|
T Consensus         6 ~~ce~cgk~frdvyhlnrhkls   27 (35)
T d2epra1           6 VACEICGKIFRDVYHLNRHKLS   27 (35)
T ss_dssp             EEETTTTEEESSHHHHHHHGGG
T ss_pred             hhHHHHHHHHHHHHHHHhhhcc
Confidence            4599999999999887777543

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.31  E-value=0.056  Score=28.74  Aligned_cols=22  Identities=18%  Similarity=0.372  Sum_probs=19.4

Q ss_pred             Ccccc--ccCceecchhhHhhhhc
Q psy7022           3 GYYCN--VCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~--vCd~~fkDs~~~ldHln   24 (124)
                      .|.|+  -|++.|..+..+..|+.
T Consensus         2 pf~C~~~~C~k~F~~~~~L~~H~r   25 (31)
T d1sp2a_           2 PFMCTWSYCGKRFTRSDELQRHKR   25 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHT
T ss_pred             cCCCcCCCCCcCcCChhHhhhhcC
Confidence            48896  59999999999999984

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=89.06  E-value=0.095  Score=28.70  Aligned_cols=22  Identities=14%  Similarity=0.347  Sum_probs=20.0

Q ss_pred             CCccccccCceecchhhHhhhh
Q psy7022           2 LGYYCNVCDCVVKDSINFLDHI   23 (124)
Q Consensus         2 ~gfyC~vCd~~fkDs~~~ldHl   23 (124)
                      +.|.|..|++.|.+-+.+..|-
T Consensus         7 arf~c~pcgirfss~stleahq   28 (36)
T d1y0jb1           7 ARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CCCBCTTTCCBCSCHHHHHHHT
T ss_pred             cceeccccceeecChhHHHhhh
Confidence            5799999999999999998885

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.97  E-value=0.07  Score=28.07  Aligned_cols=23  Identities=26%  Similarity=0.505  Sum_probs=20.8

Q ss_pred             CccccccCceecchhhHhhhhcc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHING   25 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlng   25 (124)
                      .|.|+.|++.++-.+.+..||.+
T Consensus         1 kYvC~~Cg~~C~KPSvL~KHIRs   23 (28)
T d1bboa1           1 KYICEECGIRAKKPSMLKKHIRT   23 (28)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CccccccCcccCCHHHHHHHHHH
Confidence            38899999999999999999964

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.94  E-value=0.093  Score=26.95  Aligned_cols=21  Identities=19%  Similarity=0.417  Sum_probs=17.9

Q ss_pred             cccccCceecchhhHhhhhcc
Q psy7022           5 YCNVCDCVVKDSINFLDHING   25 (124)
Q Consensus         5 yC~vCd~~fkDs~~~ldHlng   25 (124)
                      -|++|++-|.....+.-|..+
T Consensus         3 kc~~c~kcfsrkdklk~hmr~   23 (26)
T d2dmda2           3 KCEVCGKCFSRKDKLKTHMRC   23 (26)
T ss_dssp             CBTTTTBCCCCHHHHHHHGGG
T ss_pred             ccchhhhHhcchhHHHHHhhc
Confidence            599999999998888888754

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.40  E-value=0.066  Score=30.86  Aligned_cols=22  Identities=27%  Similarity=0.523  Sum_probs=19.9

Q ss_pred             Cccccc--cCceecchhhHhhhhc
Q psy7022           3 GYYCNV--CDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~v--Cd~~fkDs~~~ldHln   24 (124)
                      .|-|.+  |++.|..+..+..|+.
T Consensus        18 py~C~~~~C~k~F~~~~~L~~H~r   41 (47)
T d1ncsa_          18 TFECLFPGCTKTFKRRYNIRSHIQ   41 (47)
T ss_dssp             EEECCCTTCCCEECSSSSHHHHHH
T ss_pred             CeECCcCCCCccccCchHHHhhcc
Confidence            588988  9999999999999974

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.21  E-value=0.1  Score=27.72  Aligned_cols=22  Identities=23%  Similarity=0.596  Sum_probs=19.6

Q ss_pred             Cccccc--cCceecchhhHhhhhc
Q psy7022           3 GYYCNV--CDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~v--Cd~~fkDs~~~ldHln   24 (124)
                      -|.|.+  |+++|.|.+++-.|+.
T Consensus         2 PY~Ck~~gC~K~YtdPSSLRKH~k   25 (29)
T d2glia5           2 PYVCKLPGCTKRYTDPSSLRKHVK   25 (29)
T ss_dssp             CEECCSTTTCCEESSHHHHHHHHH
T ss_pred             CeecccCCCCcccCCHHHHHHHHH
Confidence            488999  9999999999999874

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.65  E-value=0.093  Score=29.91  Aligned_cols=21  Identities=19%  Similarity=0.347  Sum_probs=19.0

Q ss_pred             CccccccCceecchhhHhhhhc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHIN   24 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHln   24 (124)
                      -|-|+ |++.|....+|..|..
T Consensus         3 ~y~C~-Cgk~F~~~~~l~~H~~   23 (53)
T d2csha1           3 LYPCQ-CGKSFTHKSQRDRHMS   23 (53)
T ss_dssp             CEECT-TSCEESSHHHHHHHHH
T ss_pred             CCCCC-CCCeECCHHHhHHHhh
Confidence            58896 9999999999999984

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=86.89  E-value=0.13  Score=26.99  Aligned_cols=22  Identities=18%  Similarity=0.338  Sum_probs=18.9

Q ss_pred             CCccccccCceecchhhHhhhh
Q psy7022           2 LGYYCNVCDCVVKDSINFLDHI   23 (124)
Q Consensus         2 ~gfyC~vCd~~fkDs~~~ldHl   23 (124)
                      ..|-|.+|++-|-.|..-..|-
T Consensus         2 kPf~C~~CgrkFArsderkRH~   23 (28)
T d1a1ia3           2 KPFACDICGRKFARSDERKRHT   23 (28)
T ss_dssp             CCEECTTTCCEESSHHHHHHHH
T ss_pred             CCcccchhhhhhhcchhhhhhh
Confidence            3589999999999998887774

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.68  E-value=0.13  Score=28.01  Aligned_cols=22  Identities=14%  Similarity=0.347  Sum_probs=19.6

Q ss_pred             ccccc--cCceecchhhHhhhhcc
Q psy7022           4 YYCNV--CDCVVKDSINFLDHING   25 (124)
Q Consensus         4 fyC~v--Cd~~fkDs~~~ldHlng   25 (124)
                      |-|++  |++.|..+..+..|+..
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~   25 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKL   25 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHH
T ss_pred             eECCCCCCCCeeCChhHhccccCe
Confidence            77987  99999999999999854

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.40  E-value=0.16  Score=26.62  Aligned_cols=23  Identities=17%  Similarity=0.572  Sum_probs=21.0

Q ss_pred             CccccccCceecchhhHhhhhcc
Q psy7022           3 GYYCNVCDCVVKDSINFLDHING   25 (124)
Q Consensus         3 gfyC~vCd~~fkDs~~~ldHlng   25 (124)
                      .|-|++|.---++|+++.-||.+
T Consensus         3 pfkcqlcsy~srnssqltvhlr~   25 (29)
T d2dmda3           3 PFKCQICPYASRNSSQLTVHLRS   25 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHTT
T ss_pred             cceeeecccccCCchheEEeeec
Confidence            58999999999999999999854

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.63  E-value=0.22  Score=25.95  Aligned_cols=17  Identities=18%  Similarity=0.456  Sum_probs=15.2

Q ss_pred             ccCceecchhhHhhhhc
Q psy7022           8 VCDCVVKDSINFLDHIN   24 (124)
Q Consensus         8 vCd~~fkDs~~~ldHln   24 (124)
                      -|.+.|+|+++.-.||-
T Consensus         8 gC~K~Frd~saMRKHlh   24 (28)
T d1ubdc1           8 GCTKMFRDNSAMRKHLH   24 (28)
T ss_dssp             TCCCEESSHHHHHHHHG
T ss_pred             cHHHHhhchHHHHHHhh
Confidence            49999999999999884

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.60  E-value=0.22  Score=26.61  Aligned_cols=24  Identities=25%  Similarity=0.423  Sum_probs=19.1

Q ss_pred             CCccccccCceecchhhHhhhhcc
Q psy7022           2 LGYYCNVCDCVVKDSINFLDHING   25 (124)
Q Consensus         2 ~gfyC~vCd~~fkDs~~~ldHlng   25 (124)
                      ..|-|+||...|+...-..-|+.|
T Consensus         2 kp~~cpic~qrfkrkdrmsyhvrs   25 (32)
T d2epqa1           2 KPYSCPVCGLRFKRKDRMSYHVRS   25 (32)
T ss_dssp             CSSEETTTTEECSCHHHHHHHHHH
T ss_pred             CCcccchHHHHhhccccceEeeec
Confidence            358999999999987777667654

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.95  E-value=0.4  Score=26.27  Aligned_cols=22  Identities=14%  Similarity=0.388  Sum_probs=19.7

Q ss_pred             CCccccccCceecchhhHhhhh
Q psy7022           2 LGYYCNVCDCVVKDSINFLDHI   23 (124)
Q Consensus         2 ~gfyC~vCd~~fkDs~~~ldHl   23 (124)
                      ..|.|.-|+++|..-+....|-
T Consensus         3 ~afvcskcgktftrrntm~rha   24 (37)
T d1x6ha1           3 AAFVCSKCGKTFTRRNTMARHA   24 (37)
T ss_dssp             CCEECSSSCCEESCHHHHHHHH
T ss_pred             ceeeecccccchhcchHHHHHh
Confidence            5799999999999999998875

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=80.49  E-value=0.31  Score=25.01  Aligned_cols=18  Identities=17%  Similarity=0.276  Sum_probs=14.0

Q ss_pred             cccccCceecchhhHhhh
Q psy7022           5 YCNVCDCVVKDSINFLDH   22 (124)
Q Consensus         5 yC~vCd~~fkDs~~~ldH   22 (124)
                      .|+.|+++|.+..-+.-|
T Consensus         2 qcp~c~k~f~skyylkvh   19 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVH   19 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHH
T ss_pred             cCcchHHHHHHhHhhhhc
Confidence            599999999987655444

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.11  E-value=0.31  Score=28.70  Aligned_cols=22  Identities=23%  Similarity=0.326  Sum_probs=18.7

Q ss_pred             CCccccccCceecchhhHhhhh
Q psy7022           2 LGYYCNVCDCVVKDSINFLDHI   23 (124)
Q Consensus         2 ~gfyC~vCd~~fkDs~~~ldHl   23 (124)
                      +-|-|-+|++.|.|.+.+-.|-
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HE   26 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHE   26 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHH
T ss_pred             ceeeccccccccCCHHHHhHhH
Confidence            3477999999999999987774