Psyllid ID: psy7057

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------
Protein Sequence
MYKLSTALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILPNSDIVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDLPGKEVLYEPGKADGDVKMVREGSTVVAYSWSEASREWNKLGDVMGSAGGTQESSGKVLYQGKEYDFVFSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHLSQMFLEQVANFIMTNSKSKQGPTEYDFVFSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHLTSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHLSQMFLEQVANFIMTNSKSKQGPTVTQTPPSGEYCDPFTGKIHSHHLSQMF
Secondary Structure (PSIPRED)
ccEEccccccccccEEEEEEcccccEEEEEccccEEEEEcccccccccccEEEEEEccccEEEEEccccEEcEEEccccccEEEEEEccccEEEEccccccEEEEcccccEEEEEccccccEEEEEEEccccEEEEEccccEEEEEcccccEEEEEEcccccEEEEEEcccEEEEEEccccEEEEEcccccEEEEccccEEEEEEcccccEEEccccccEEEEEcccccEEEEEEccEEccEEEEEEcccccEEEEEEEEccccEEEEEcccccccccEEEEEEcccccEEEEEcccccccEEcccccccccccccccEEEEEEEEEcccEEEEEEccccEEEEEccccEEEcccccccccccEEEEcccccEEEEEEccccccEEEccccccccHHHHHHHHHHHccccHHHHHHHHHHHHccccccccccccccEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHcccc
Secondary Structure Prediction (SSPRO)
ccHHHHHcccccccEEEEEEccccEEEEEccccEEEEEEEEEEEEcccccEEEEEccccEEEEEEcccccEEEEEEcccccEEEEEEccccEEEEEccccEEEEEEccccEEEEEccccccEEEEEEccccEEEEEccccEEEEEEcccccEEEEEEcccccEEEEcccccEEEEcccccEEEEEEcccccEEEcccccEEEEEEccccEEEEEccccEEEEEEcccccEEEEEccccccEEEEEEEEccccccEEEEEccccEEEEEEccccccccEEEEEEEcccccEEEccccccccEEEEEEcccccEEEEccccccEEEEcccccEEEEEccccEEEEEEccccEEEEEccccccccEEEEccccccEEEEEEccccccccEccccccccHHHHHHHHHHHccccHHHHHHHHHHEEcccccccccccccccccccccccccccccccccccccccccccEEEcccEEEEEcccccccccccccccccHHHHHHHHHHHccccHHHHHHHHHHHHHHcccccccEEEEccccccccccccccEEEcHHHHHc
Coil and Loop (DISEMBL)
MYKLSTalyghsmdvrslsvtpdgcilsasrdksaklwkpndlspgakvNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEflktltghtdcvrglavlndtdfvscsndasirvwdsttgkcvhtmyghpnfiYSVAahgdlitsggedqcvCVYQnkaqnsfmipAMSVWAVAilpnsdivtgssdGIVRVfsanpdrqaEDAVQAQYAEEVKKLKSAneqeiggvkvsddgivrvfsanpdrqaEDAVQAQYAEEVKKLKSAneqeiggvkvsdlpgkevlyepgkadgdvkmVREGSTVVAYSWSEASREWNKLGdvmgsaggtqessgkvlyqgkeydFVFSVdieegkpplklpynvsedpwHAAQAFIHTHHLSQMFLEQVANFIMTnskskqgpteydFVFSVdieegkpplklpynvsedpwHAAQAFIhthhltsvdieegkpplklpynvsedpwHAAQAFIHTHHLSQMFLEQVANFIMTnskskqgptvtqtppsgeycdpftgkihshhlsqmf
Flexible Loop (DISEMBL)
MYKLSTALYGHSMDVRSLSVTPDGCILSAsrdksaklwkpndlspgakVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILPNSDIVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKlksaneqeiggvkvsddgiVRVFSANPDRQAEDAVQAQYAEEVKKlksaneqeiggvkvsdlpgkevlyepgkadgdvkmvREGSTVVAYSWSEASREWNKLGDVMGSAGGTQESSGKVLYQGKEYDFVFSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHLSQMFLEQVANFIMTNSKSKQGPTEYDFVFSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHLTSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHLSQMFLEQVANFIMTNSKSKQGPTVTQTPPSGEYCDPFTGKIHSHHLSQMF
Low Complexity Region (SEG)
MYKLSTALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILPNSDIVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDLPGKEVLYEPGKADGDVKMVREGSTVVAYSWSEASREWNKLGDVMGSAGGTQESSGKVLYQGKEYDFVFSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHLSQMFLEQVANFIMTNSKSKQGPTEYDFVFSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHLTSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHLSQMFLEQVANFIMTNSKSKQGPTVTQTPPSGEYCDPFTGKIHSHHLSQMF
Disordered region (IsUnstruct)
*****************LSVTPDGCIL*********LW*******GAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILPNSDIVTGSSDGIVRVF***************************************GIVRVF******************************************************VKMVREGSTVVAYSWSEASREWNKLGDV************KVLYQGKEYDFVFSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHLSQMFLEQVANFIMTN*******TEYDFVFSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHLTSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHLSQMFLEQVANFIM*************************************
Disordered Region (DISOPRED)
MYKLSTALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILPNSDIVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDLPGKEVLYEPGKADGDVKMVREGSTVVAYSWSEASREWNKLGDVMGSAGGTQESSGKVLYQGKEYDFVFSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHLSQMFLEQVANFIMTNSK***************************************FIHTHHLTSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHLSQMFLEQVANFIM***********************FTGKIHS*******
Disordered Region (DISEMBL)
MYKLSTALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILPNSDIVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDLPGKEVLYEPGKADGDVKMVREGSTVVAYSWSEASREWNKLGDVMGSAGGTQESSGKVLYQGKEYDFVFSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHLSQMFLEQVANFIMTNSKSKQGPTEYDFVFSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHLTSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHLSQMFLEQVANFIMTNS***********PPSGEYCDPFTGKIHSHHLSQMF
Disordered Region (DISPRO)
MYKLSTALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILPNSDIVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDLPGKEVLYEPGKADGDVKMVREGSTVVAYSWSEASREWNKLGDVMGSAGGTQESSGKVLYQGKEYDFVFSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHLSQMFLEQVANFIMTNSK******EYDFVFSVDIEEGKP*********EDPWHAAQAFIHTHHLTSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHLSQMFLEQVANFIMTNSKSKQGPTVTQTPPSGEYCDPFTGKIHSHHLSQMF
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MYKLSTALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILPNSDIVTGSSDGIVRVFSANPDRQAxxxxxxxxxxxxxxxxxxxxxEIGGVKVSDDGIVRVFSANPDRQAxxxxxxxxxxxxxxxxxxxxxEIGGVKVSDLPGKEVLYEPGKADGDVKMVREGSTVVAYSWSEASREWNKLGDVMGSAGGTQESSGKVLYQGKEYDFVFSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHLSQMFLEQVANFIMTNSKSKQGPTEYDFVFSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHLTSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHLSQMFLEQVANFIMTNSKSKQGPTVTQTPPSGEYCDPFTGKIHSHHLSQMF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	557	2.2.26 [Sep-21-2011]
Q9Y263	795	Phospholipase A-2-activat	yes	N/A	0.603	0.422	0.419	5e-80
Q6GM65	799	Phospholipase A-2-activat	N/A	N/A	0.615	0.429	0.4	1e-77
P54319	795	Phospholipase A-2-activat	yes	N/A	0.588	0.412	0.401	1e-76
P27612	794	Phospholipase A-2-activat	yes	N/A	0.588	0.413	0.398	1e-76
O94289	718	Ubiquitin homeostasis pro	yes	N/A	0.576	0.447	0.361	8e-65
P36037	715	Protein DOA1 OS=Saccharom	yes	N/A	0.570	0.444	0.330	2e-47
Q8YV57	1683	Uncharacterized WD repeat	yes	N/A	0.393	0.130	0.330	9e-21
Q8YRI1	1526	Uncharacterized WD repeat	no	N/A	0.378	0.138	0.296	6e-19
B5X3Z6	410	Lissencephaly-1 homolog A	N/A	N/A	0.335	0.456	0.288	1e-18
Q6NZH4	410	Lissencephaly-1 homolog O	no	N/A	0.335	0.456	0.279	3e-18

>sp|Q9Y263|PLAP_HUMAN Phospholipase A-2-activating protein OS=Homo sapiens GN=PLAA PE=1 SV=2

 Score =  299 bits (765), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 164/391 (41%), Positives = 236/391 (60%), Gaps = 55/391 (14%)

Query: 43  LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGV-IQLANGIIVTGCADKT 101
           LS G K  TLLS SWD TAK+W   + +C +T++ H  AVW V I    G+++TG ADKT
Sbjct: 118 LSSG-KFGTLLSGSWDTTAKVWL--NDKCMMTLQGHTAAVWAVKILPEQGLMLTGSADKT 174

Query: 102 IKLHSEEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPN 161
           +KL  + G   +T +GH DCVRGLA+L++T+F+SC+NDASIR W   TG+C+   YGH N
Sbjct: 175 VKLW-KAGRCERTFSGHEDCVRGLAILSETEFLSCANDASIRRWQ-ITGECLEVYYGHTN 232

Query: 162 FIYSVAAH---GDLITSGGEDQCVCVYQN-KAQNSFMIPAMSVWAVAILPNSDIVTGSSD 217
           +IYS++      D +T+  ED+ + ++++ +   +  +PA S+W   +L N DIV G+SD
Sbjct: 233 YIYSISVFPNCRDFVTT-AEDRSLRIWKHGECAQTIRLPAQSIWCCCVLDNGDIVVGASD 291

Query: 218 GIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQAE 277
           GI+RVF+ + DR A        AEE+K    A E+E+               A  D +  
Sbjct: 292 GIIRVFTESEDRTAS-------AEEIK----AFEKELS-------------HATIDSKTG 327

Query: 278 DAVQAQYAEEVKKLKSANEQEIGGVKVSDLPGKEVLYEPGKADGDVKMVREGSTVVAYSW 337
           D                    +G +    LPG+E L EPG  +G  +++R+G  V AY W
Sbjct: 328 D--------------------LGDINAEQLPGREHLNEPGTREGQTRLIRDGEKVEAYQW 367

Query: 338 SEASREWNKLGDVMGSAGGTQESSGKVLYQGKEYDFVFSVDIEEGKPPLKLPYNVSEDPW 397
           S +   W K+GDV+GS+G  Q++SGKVLY+GKE+D+VFS+D+ EG P  KLPYN S+DPW
Sbjct: 368 SVSEGRWIKIGDVVGSSGANQQTSGKVLYEGKEFDYVFSIDVNEGGPSYKLPYNTSDDPW 427

Query: 398 HAAQAFIHTHHLSQMFLEQVANFIMTNSKSK 428
             A  F+  + L+ MFL+QVA FI+ N+K +
Sbjct: 428 LTAYNFLQKNDLNPMFLDQVAKFIIDNTKGQ 458

Involved in the maintenance of ubiquitin levels.
Homo sapiens (taxid: 9606)

>sp|Q6GM65|PLAP_XENLA Phospholipase A-2-activating protein OS=Xenopus laevis GN=plaa PE=2 SV=2

 Score =  290 bits (743), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 160/400 (40%), Positives = 227/400 (56%), Gaps = 57/400 (14%)

Query: 43  LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGV-IQLANGIIVTGCADKT 101
           LS G K  TLLS SWD T K+W   + +C +T++ H  AVW V I    G+++TG ADK+
Sbjct: 124 LSSG-KFGTLLSGSWDTTGKVWL--NDKCMMTLQGHTAAVWAVKILPEQGLMLTGSADKS 180

Query: 102 IKLHSEEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPN 161
           IKL  + G    T  GH DCVRGLA +NDT+F+SCSNDAS+R W   TG+C+   YGH N
Sbjct: 181 IKLW-KAGRCEMTFLGHEDCVRGLATINDTEFLSCSNDASVRRW-LITGECLQIYYGHTN 238

Query: 162 FIYSVAAH---GDLITSGGEDQCVCVYQN-KAQNSFMIPAMSVWAVAILPNSDIVTGSSD 217
           +IYSV       D +T+  ED+ + +++  +   +  +PA SVW   +L N DIV G+SD
Sbjct: 239 YIYSVCLFPNSQDFVTTS-EDRSIRIWRKGECTQTIRLPAQSVWCCCVLDNGDIVVGASD 297

Query: 218 GIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQAE 277
                                                        GI+RVF+ +PDR A 
Sbjct: 298 ---------------------------------------------GIIRVFTESPDRIAS 312

Query: 278 -DAVQAQYAEEVKKLKSANEQEIGGVKVSDLPGKEVLYEPGKADGDVKMVREGSTVVAYS 336
            + +QA   E  K        ++G +K+ DLPG++ L EPG  DG  ++++E   V AY 
Sbjct: 313 IEEIQAFENELSKATIDPKTGDLGDIKIDDLPGRDHLNEPGTRDGQTRLIKEDGKVEAYQ 372

Query: 337 WSEASREWNKLGDVMGSAGGTQESSGKVLYQGKEYDFVFSVDIEEGKPPLKLPYNVSEDP 396
           WS     W K+GDV+GS+G TQ++SG+VL++GKEYD+VF++D+ E  P  KLPYN++EDP
Sbjct: 373 WSTGEGRWMKIGDVVGSSGATQQTSGRVLFEGKEYDYVFTIDVNESGPSHKLPYNLTEDP 432

Query: 397 WHAAQAFIHTHHLSQMFLEQVANFIMTNSKSKQGPTEYDF 436
           W  A  F+  + L+ MFL+QVA FI+ N+  +   T   +
Sbjct: 433 WLVAYNFLQKNDLNPMFLDQVAKFIIDNTAGQTPSTNLGY 472

Involved in the maintenance of ubiquitin levels.

Xenopus laevis (taxid: 8355)

>sp|P54319|PLAP_RAT Phospholipase A-2-activating protein OS=Rattus norvegicus GN=Plaa PE=2 SV=3

 Score =  287 bits (735), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 160/399 (40%), Positives = 230/399 (57%), Gaps = 71/399 (17%)

Query: 43  LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGV-IQLANGIIVTGCADKT 101
           LS G K  TLLS SWD TAK+W   + +C +T++ H  AVW V I    G+++TG ADKT
Sbjct: 118 LSSG-KFGTLLSGSWDTTAKVWL--NDKCMMTLQGHTAAVWAVKILPEQGLMLTGSADKT 174

Query: 102 IKLHSEEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPN 161
           IKL  + G   +T +GH DCVRGLA+L++T+F+SC+NDASIR W   TG+C+   YGH N
Sbjct: 175 IKLW-KAGRCERTFSGHEDCVRGLAILSETEFLSCANDASIRRWQ-ITGECLGVYYGHTN 232

Query: 162 FIYSVAAH---GDLITSGGEDQCVCVYQN-KAQNSFMIPAMSVWAVAILPNSDIVTGSSD 217
           +IYS++      D +T+  ED+ + ++++ +   +  +PA S+W   +L N DIV G+SD
Sbjct: 233 YIYSISVFPNCRDFVTTA-EDRSLRIWKHGECAQTIRLPAQSIWCCCVLDNGDIVVGASD 291

Query: 218 GIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQAE 277
                                                        GI+RVF+   +R A 
Sbjct: 292 ---------------------------------------------GIIRVFTEADERTAS 306

Query: 278 DAVQAQYAEEVKKLKSANEQ--------EIGGVKVSDLPGKEVLYEPGKADGDVKMVREG 329
                  AEE+K  +    Q        ++G +    LPG+E L EPG  +G  +++R+G
Sbjct: 307 -------AEEIKAFERELSQATIDSKTGDLGDINAEQLPGREHLNEPGTREGQTRLIRDG 359

Query: 330 STVVAYSWSEASREWNKLGDVMGSAGGTQESSGKVLYQGKEYDFVFSVDIEEGKPPLKLP 389
             V AY WS +   W K+GDV+GS+G  Q++SGKVLY+GKE+D+VFS+D+ EG P  KLP
Sbjct: 360 ERVEAYQWSVSDGRWIKIGDVVGSSGANQQTSGKVLYEGKEFDYVFSIDVNEGGPSYKLP 419

Query: 390 YNVSEDPWHAAQAFIHTHHLSQMFLEQVANFIMTNSKSK 428
           YNVS+DPW  A  F+  + L+ MFL+QVA FI+ N+K +
Sbjct: 420 YNVSDDPWLVAYNFLQKNDLNPMFLDQVAKFIIDNTKGQ 458

Involved in the maintenance of ubiquitin levels.

Rattus norvegicus (taxid: 10116)

>sp|P27612|PLAP_MOUSE Phospholipase A-2-activating protein OS=Mus musculus GN=Plaa PE=2 SV=4

 Score =  287 bits (735), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 159/399 (39%), Positives = 230/399 (57%), Gaps = 71/399 (17%)

Query: 43  LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGV-IQLANGIIVTGCADKT 101
           LS G K  TLLS SWD TAK+W   + +C +T++ H  AVW V I    G+++TG ADKT
Sbjct: 118 LSSG-KFGTLLSGSWDTTAKVWL--NDKCMMTLQGHTAAVWAVKILPEQGLMLTGSADKT 174

Query: 102 IKLHSEEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPN 161
           IKL  + G   +T  GH DCVRGLA+L++T+F+SC+NDASIR W   TG+C+   +GH N
Sbjct: 175 IKLW-KAGRCERTFLGHEDCVRGLAILSETEFLSCANDASIRRWQ-ITGECLEVYFGHTN 232

Query: 162 FIYSVAAH---GDLITSGGEDQCVCVYQN-KAQNSFMIPAMSVWAVAILPNSDIVTGSSD 217
           +IYS++      D +T+  ED+ + ++++ +   +  +PA S+W   +L N DIV G+SD
Sbjct: 233 YIYSISVFPNSKDFVTTA-EDRSLRIWKHGECAQTIRLPAQSIWCCCVLENGDIVVGASD 291

Query: 218 GIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQAE 277
                                                        GI+RVF+ + +R A 
Sbjct: 292 ---------------------------------------------GIIRVFTESEERTAS 306

Query: 278 DAVQAQYAEEVKKLKSANEQ--------EIGGVKVSDLPGKEVLYEPGKADGDVKMVREG 329
                  AEE+K  +    Q        ++G +    LPG+E L EPG  +G  +++R+G
Sbjct: 307 -------AEEIKAFERELSQATIDSKTGDLGDINAEQLPGREHLSEPGTREGQTRLIRDG 359

Query: 330 STVVAYSWSEASREWNKLGDVMGSAGGTQESSGKVLYQGKEYDFVFSVDIEEGKPPLKLP 389
             V AY WS +   W K+GDV+GS+G  Q++SGKVLY+GKE+D+VFS+D+ EG P  KLP
Sbjct: 360 ERVEAYQWSVSDGRWIKIGDVVGSSGANQQTSGKVLYEGKEFDYVFSIDVNEGGPSYKLP 419

Query: 390 YNVSEDPWHAAQAFIHTHHLSQMFLEQVANFIMTNSKSK 428
           YNVS+DPW  A  F+  + L+ MFL+QVA FI+ N+K +
Sbjct: 420 YNVSDDPWLVAYNFLQKNDLNPMFLDQVAKFIIDNTKGQ 458

Involved in the maintenance of ubiquitin levels.

Mus musculus (taxid: 10090)

>sp|O94289|LUB1_SCHPO Ubiquitin homeostasis protein lub1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=lub1 PE=1 SV=2

 Score =  248 bits (633), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 137/379 (36%), Positives = 208/379 (54%), Gaps = 58/379 (15%)

Query: 51  TLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGE 110
           T+++ SWD TA++W L   QCK  ++ H+ +VW V+ L   I +TG ADK IK+ + E +
Sbjct: 116 TIITGSWDSTARVWAL--GQCKYVLKGHQSSVWAVLALGEDIFITGSADKLIKIWNGE-K 172

Query: 111 FLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA-- 168
            +K++  H DCVR L  +    F SCSND  I++W S  G+ ++ ++GH +F+YS+    
Sbjct: 173 LVKSILAHNDCVRSLCQI-PGGFASCSNDGVIKLWTSD-GEFLYELHGHTSFVYSLTYIH 230

Query: 169 HGDLITSGGEDQCVCVYQNK-AQNSFMIPAMSVWAVAILPNSDIVTGSSDGIVRVFSANP 227
           +  LI S GED+ + +++ K       +P  SVW+V+ LPN D+V GSS           
Sbjct: 231 NQQLIASCGEDRTIRIWKGKECLQCITLPTTSVWSVSSLPNGDLVCGSS----------- 279

Query: 228 DRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQAEDAVQAQYAEE 287
                                             DG VR+F+ +  R A   V   + E 
Sbjct: 280 ----------------------------------DGFVRIFTVDKVRVAPTEVLKNFEER 305

Query: 288 VKKLKSANEQEIGGVKVSDLPGKEVLYEPGKADGDVKMVREGSTVVAYSWSEASREWNKL 347
           V +  + + QE+G +K   LPG E+L +PGKADGDV MVR  + V AY WS+   EW K+
Sbjct: 306 VSQF-AISSQEVGDIKKGSLPGLEILSKPGKADGDVVMVRVNNDVEAYQWSQKENEWKKI 364

Query: 348 GDVMGSAGGTQESSGKVLYQGKEYDFVFSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTH 407
           G V+ + G  +    K L++GKEYD+VF VD+ +G+ PLKLPYN +E+P+ AA  F+  +
Sbjct: 365 GQVVDAVGNNR----KQLFEGKEYDYVFDVDVADGQAPLKLPYNATENPYQAANRFLELN 420

Query: 408 HLSQMFLEQVANFIMTNSK 426
            L   + ++V  FI  N++
Sbjct: 421 QLPLSYTDEVVKFIEKNTQ 439

Acts as a negative regulator of vacuole-dependent ubiquitin degradation.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|P36037|DOA1_YEAST Protein DOA1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DOA1 PE=1 SV=1

 Score =  191 bits (484), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 127/384 (33%), Positives = 198/384 (51%), Gaps = 66/384 (17%)

Query: 52  LLSASWDMTAKLWCLESQQCKLTIRQHEMAVWG--VIQLANGIIVTGCADKTIKLHSEEG 109
           ++S SWD TAK+W  +       ++ H  +VW   V+  +    +T  ADKTIKL   + 
Sbjct: 112 VISGSWDKTAKVW--KEGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQND- 168

Query: 110 EFLKTLTG-HTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA 168
           + +KT +G H D VR LAV++D  F+SCSND  I++ D  TG  + T  GH +F+Y +  
Sbjct: 169 KVIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKL 228

Query: 169 --HGDLITSGGEDQCVCVYQNK---AQNSFMIPAMSVWAVAILPNSDIVTGSSDGIVRVF 223
             +GD++ S GED+ V ++  +    +    +PA+S+W+V  + N DI+ GSSD      
Sbjct: 229 LPNGDIV-SCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGDIIVGSSDN----- 282

Query: 224 SANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQA-EDAVQA 282
                                                   +VR+FS    R A ED +  
Sbjct: 283 ----------------------------------------LVRIFSQEKSRWASEDEINE 302

Query: 283 QYAEEVKKLKSANEQEIGGVKVSDLPGKEVLYEPGKADGDVKMVRE-GSTVVAYSWSEAS 341
              +  K   S+   E    K+S     E+L  PG+ +G + +V+    T+ A+ +S +S
Sbjct: 303 LSTQVEKSTISSKTIEFDESKLSPY---EILQSPGRKEGQIVVVKSPQGTIEAHQFSNSS 359

Query: 342 REWNKLGDVMGSAGGTQESSGKVLYQGKEYDFVFSVDIEEGKPPLKLPYNVSEDPWHAAQ 401
             W K+GDV+G+  G   +  K+ ++GK YD+VF VDIE+GKPPLKLP NVS++P+ AA 
Sbjct: 360 --WKKVGDVVGA--GATGNDKKIEFEGKTYDYVFDVDIEDGKPPLKLPINVSDNPYTAAD 415

Query: 402 AFIHTHHLSQMFLEQVANFIMTNS 425
            F+  + L   + +QV  FI+ N+
Sbjct: 416 NFLARYELPMSYRDQVVQFILKNT 439

Participates in the regulation of the ubiquitin conjugation pathway involving CDC48 by hindering multiubiquitination of substrates at the CDC48 chaperone. May act by preventing the interaction between CDC48 and the E4 enzyme UFD2, leading to prevent multiubiquitination of substrates and subsequent degradation. Essential for maintaining cellular ubiquitin levels.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|Q8YV57|Y2124_NOSS1 Uncharacterized WD repeat-containing protein all2124 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=all2124 PE=4 SV=1

 Score =  102 bits (253), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 82/248 (33%), Positives = 119/248 (47%), Gaps = 29/248 (11%)

Query: 3    KLSTALYGHSMDVRSLSVTPDG-CILSASRDKSAKLWKPND------------------L 43
            +L   L GH   V S+S +PDG  I S   DK+ KLW+ +D                   
Sbjct: 1104 RLFRTLNGHEDAVYSVSFSPDGQTIASGGSDKTIKLWQTSDGTLLKTITGHEQTVNNVYF 1163

Query: 44   SPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTI 102
            SP  K   L SAS D + KLW   S Q  +T+  H   V  V    +G  I  G  DKT+
Sbjct: 1164 SPDGK--NLASASSDHSIKLWDTTSGQLLMTLTGHSAGVITVRFSPDGQTIAAGSEDKTV 1221

Query: 103  KL-HSEEGEFLKTLTGHTDCVRGLAVLND-TDFVSCSNDASIRVWDSTTGKCVHTMYGHP 160
            KL H ++G+ LKTL GH D V  L+   D     S S D +I++W    GK V T+ GH 
Sbjct: 1222 KLWHRQDGKLLKTLNGHQDWVNSLSFSPDGKTLASASADKTIKLWRIADGKLVKTLKGHN 1281

Query: 161  NFIYSV--AAHGDLITSGGEDQCVCVYQNKA--QNSFMIPAMSVWAVAILPNSDIVTGSS 216
            + ++ V  ++ G  I S   D  + ++        +F   +  V+AV  LP+S+I+  +S
Sbjct: 1282 DSVWDVNFSSDGKAIASASRDNTIKLWNRHGIELETFTGHSGGVYAVNFLPDSNIIASAS 1341

Query: 217  -DGIVRVF 223
             D  +R++
Sbjct: 1342 LDNTIRLW 1349

Nostoc sp. (strain PCC 7120 / UTEX 2576) (taxid: 103690)

>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1

 Score = 96.3 bits (238), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 121/243 (49%), Gaps = 32/243 (13%)

Query: 10   GHSMDVRSLSVTPDGCIL-SASRDKSAKLWKPNDLSPGAKVNT----------------- 51
            GH+  V S+  + DG +L S S D++ +LW   D+S G  + T                 
Sbjct: 904  GHNSWVNSVGFSQDGKMLASGSDDQTVRLW---DISSGQCLKTFKGHTSRVRSVVFSPNS 960

Query: 52   --LLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGV-IQLANGIIVTGCADKTIKLHS-E 107
              L S S D T +LW + S +C    + H   V+ V   L   ++ TG  D+T++L    
Sbjct: 961  LMLASGSSDQTVRLWDISSGECLYIFQGHTGWVYSVAFNLDGSMLATGSGDQTVRLWDIS 1020

Query: 108  EGEFLKTLTGHTDCVRGLAVLNDTDFV-SCSNDASIRVWDSTTGKCVHTMYGHPNFIYSV 166
              +      GHT CVR +   +D   + S S+D ++R+WD ++G C++T+ GH + + SV
Sbjct: 1021 SSQCFYIFQGHTSCVRSVVFSSDGAMLASGSDDQTVRLWDISSGNCLYTLQGHTSCVRSV 1080

Query: 167  --AAHGDLITSGGEDQCVCVYQNKAQNS-FMIPAMSVWAVAIL--PNS-DIVTGSSDGIV 220
              +  G ++ SGG+DQ V ++   + N  + +   + W   ++  PN   +  GSSD IV
Sbjct: 1081 VFSPDGAMLASGGDDQIVRLWDISSGNCLYTLQGYTSWVRFLVFSPNGVTLANGSSDQIV 1140

Query: 221  RVF 223
            R++
Sbjct: 1141 RLW 1143

Nostoc sp. (strain PCC 7120 / UTEX 2576) (taxid: 103690)

>sp|B5X3Z6|LIS1A_SALSA Lissencephaly-1 homolog A OS=Salmo salar GN=pafah1b1-1 PE=2 SV=1

 Score = 94.7 bits (234), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 112/229 (48%), Gaps = 42/229 (18%)

Query: 2   YKLSTALYGHSMDVRSLSVTPDG-CILSASRDKSAKLWKP----------------NDLS 44
           ++    ++GH  +V S+++ P+G  I+SASRDK+ K+W+                   + 
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVR 241

Query: 45  PGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAV----WG------VIQLANG--- 91
           P      + S S D T ++W + S++CK  +R+HE  V    W        I  A G   
Sbjct: 242 PNQDGTLIASCSNDQTVRVWVVASKECKAELREHEHVVECISWAPESAHPTILEATGSES 301

Query: 92  --------IIVTGCADKTIKLHSEE-GEFLKTLTGHTDCVRGLAVLNDTDFV-SCSNDAS 141
                    +++G  DKTIK+     G  L TL GH + VRG+ V     F+ SC++D +
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGMLVHPGGKFILSCADDKT 361

Query: 142 IRVWDSTTGKCVHTMYGHPNFIYSVAAHGD--LITSGGEDQCVCVYQNK 188
           +R+WD    +C+ T+  H +F+ S+  H +   + +G  DQ V V++ +
Sbjct: 362 LRIWDYKNKRCMKTLGAHEHFVTSLDFHKNAPYVVTGSVDQTVKVWECR 410

Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes such as the maintenance of Golgi integrity, the peripheral transport of microtubule fragments and the coupling of the nucleus and centrosome. May be required for proliferation of neuronal precursors and neuronal migration.

Salmo salar (taxid: 8030)

>sp|Q6NZH4|LIS1_XENTR Lissencephaly-1 homolog OS=Xenopus tropicalis GN=pafah1b1 PE=2 SV=3

 Score = 93.6 bits (231), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 110/229 (48%), Gaps = 42/229 (18%)

Query: 2   YKLSTALYGHSMDVRSLSVTPDG-CILSASRDKSAKLWKPND----------------LS 44
           ++    ++GH  +V S+++ P+G  I+SASRDK+ K+W+                   + 
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR 241

Query: 45  PGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAV----------WGVIQLANG--- 91
           P      + S S D T ++W + +++CK  +R+HE  V          +  I  A G   
Sbjct: 242 PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISDATGSET 301

Query: 92  --------IIVTGCADKTIKLHSEE-GEFLKTLTGHTDCVRGLAVLNDTDFV-SCSNDAS 141
                    +++G  DKTIK+     G  L TL GH + VRG+       F+ SC++D +
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDISIGMCLMTLVGHDNWVRGVQFHPGGKFILSCADDKT 361

Query: 142 IRVWDSTTGKCVHTMYGHPNFIYSVAAH--GDLITSGGEDQCVCVYQNK 188
           IR+WD    +C+ T+  H +F+ S+  H     + +G  DQ V V++ +
Sbjct: 362 IRIWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410

Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes such as the maintenance of Golgi integrity, the peripheral transport of microtubule fragments and the coupling of the nucleus and centrosome. May be required for proliferation of neuronal precursors and neuronal migration.

Xenopus tropicalis (taxid: 8364)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	557
357612885	771	putative phospholipase A2, activating pr	0.684	0.494	0.390	1e-95
383864085	785	PREDICTED: phospholipase A-2-activating	0.682	0.484	0.396	3e-93
242004867	757	Phospholipase A-2-activating protein, pu	0.694	0.511	0.398	2e-92
405977739	785	Phospholipase A-2-activating protein [Cr	0.660	0.468	0.426	3e-90
350402175	782	PREDICTED: phospholipase A-2-activating	0.684	0.487	0.396	2e-89
307196404	775	Phospholipase A-2-activating protein [Ha	0.682	0.490	0.396	3e-88
328707744	773	PREDICTED: phospholipase A-2-activating	0.682	0.491	0.363	7e-88
189240740	792	PREDICTED: similar to LOC506073 protein	0.696	0.489	0.384	2e-87
307186588	774	Phospholipase A-2-activating protein [Ca	0.684	0.492	0.391	7e-87
156537301	766	PREDICTED: phospholipase A-2-activating	0.667	0.485	0.390	9e-86

>gi|357612885|gb|EHJ68214.1| putative phospholipase A2, activating protein [Danaus plexippus]

 Score =  356 bits (914), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 195/499 (39%), Positives = 272/499 (54%), Gaps = 118/499 (23%)

Query: 2   YKLSTALYGHSMDVRSLSVT---------------------------------------- 21
           YKLS+ L GHSMDVR ++ T                                        
Sbjct: 6   YKLSSVLCGHSMDVRCVATTKESCILSASRDRTARLWHPEGTKDFVNVVTYKGHDNFVSC 65

Query: 22  ----------PDGCILSASRDKSAKLWKPND----------------LSPGAKVNTLLSA 55
                     P+G +++ S D +   +   D                ++PG     LLSA
Sbjct: 66  VCWLPPCEAFPEGLVVTGSNDNTILGYNLQDGAIQIHLKGHNNAVCSVAPGNDSGILLSA 125

Query: 56  SWDMTAKLWCLES-QQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKT 114
           SWD T+++W + S Q   + ++ H+ AVW VI+L+NG+  T  ADKTIKL  ++G  + T
Sbjct: 126 SWDNTSRIWNINSPQMSPVVLKGHQAAVWCVIELSNGVYATASADKTIKLWRKDGALINT 185

Query: 115 LTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGD--L 172
           L+GHTDCVRGL + +   F+SCSNDASI++W S  G C++T YGH N++Y ++++ +  +
Sbjct: 186 LSGHTDCVRGLTIASSESFLSCSNDASIKLW-SNKGDCINTYYGHSNYVYGISSNPESGM 244

Query: 173 ITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILPNSDIVTGSSDGIVRVFSANPDRQAE 232
             S GED  + ++      +  +PA SVW++A L N D+VTGSS                
Sbjct: 245 FASCGEDGALRLWSGTESIALRLPAHSVWSIACLNNGDVVTGSS---------------- 288

Query: 233 DAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQAEDAVQAQYAEEVKKLK 292
                                        DGI+RVF+ +P R A++     Y E+ KK+ 
Sbjct: 289 -----------------------------DGIIRVFTKDPVRFADETTLKNYEEDCKKMI 319

Query: 293 SANEQEIGGVKVSDLPGKEVLYEPGKADGDVKMVREGSTVVAYSWSEASREWNKLGDVMG 352
            A++QEIGG K+S+LPG EVL EPG+ DG  K+VR G++V  Y+W  A   W +LGDVMG
Sbjct: 320 EASQQEIGGFKLSELPGPEVLLEPGRTDGQTKLVRRGASVKCYAWRAAGGTWEELGDVMG 379

Query: 353 SAGGTQESSGKVLYQGKEYDFVFSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHLSQM 412
           S   TQ   GK +YQG+EYDFVFSVDI++G PP+KLP+N +EDPW AAQAFIH H L Q+
Sbjct: 380 STPPTQ---GKTMYQGQEYDFVFSVDIKDGAPPIKLPFNKTEDPWVAAQAFIHKHELPQV 436

Query: 413 FLEQVANFIMTNSKSKQGP 431
           +LEQVANFI+TN+K    P
Sbjct: 437 YLEQVANFIITNAKLDSVP 455

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383864085|ref|XP_003707510.1| PREDICTED: phospholipase A-2-activating protein-like [Megachile rotundata]

 Score =  349 bits (895), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 179/451 (39%), Positives = 265/451 (58%), Gaps = 71/451 (15%)

Query: 2   YKLSTALYGHSMDVRSLSV------TPDGCILSASRDKSAKLWKPNDLSP---------- 45
           Y+ +T L GH+  V S+ V       P G I++ S DK+ +++ P+   P          
Sbjct: 64  YEHTTTLKGHTNFVTSVCVIDPSEHNPTGFIITGSHDKTIRIYLPDQTEPINIIKNHQDT 123

Query: 46  ------GAKVNTLLSASWDMTAKLWCL-ESQQCKLTIRQHEMAVWGVIQLANGIIVTGCA 98
                 G K  T LS+SWDM+AK+W L +  +  L +  H  AVW V  L++G  VTG A
Sbjct: 124 VCKLRAGKKEGTFLSSSWDMSAKVWNLNDLSKPLLDLLGHTAAVWCVADLSSGFYVTGSA 183

Query: 99  DKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYG 158
           DK + + + +G     LTGHTDCVR ++ +N+ +F++C+NDA++R W+ + G C+ T  G
Sbjct: 184 DKLVIIWTSDGSIQHKLTGHTDCVRDISTINNNEFLTCANDATVRHWNVSLGTCLGTYCG 243

Query: 159 HPNFIYSVAA--HGDLITSGGEDQCVCVYQN-KAQNSFMIPAMSVWAVAILPNSDIVTGS 215
           H N+IYS+ A  +G  I + GED+ + ++ N +   +  +P  SVW +A+LP+ D+VTGS
Sbjct: 244 HENYIYSIVAFENGTSIFTAGEDRTLRIWNNSELSQTITLPTQSVWCIALLPDGDVVTGS 303

Query: 216 SDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQ 275
           SD                                             GIVR+FS NP+  
Sbjct: 304 SD---------------------------------------------GIVRIFSCNPEHY 318

Query: 276 AEDAVQAQYAEEVKKLKSANEQEIGGVKVSDLPGKEVLYEPGKADGDVKMVREGSTVVAY 335
           A+  +  ++ +EV  +K   +QE+GG+KV DLP  + L +PG+ DG  K++ +G  + AY
Sbjct: 319 ADPEILEKFEQEVANVKLNAQQELGGIKVKDLPDAKALLQPGQRDGQTKIINDGDAIRAY 378

Query: 336 SWSEASREWNKLGDVMGSAGGTQESSGKVLYQGKEYDFVFSVDIEEGKPPLKLPYNVSED 395
           SWS+  + W K+GDVMG++GG+  +SGK LY GKEYD+VFSVDI++G PPLKLPYN  +D
Sbjct: 379 SWSQNEQRWIKIGDVMGASGGSAATSGKQLYNGKEYDYVFSVDIQDGIPPLKLPYNNDQD 438

Query: 396 PWHAAQAFIHTHHLSQMFLEQVANFIMTNSK 426
           PWH AQ F+H + LSQ+FL+QVANFI+ NS+
Sbjct: 439 PWHVAQKFLHDNGLSQLFLDQVANFIIKNSQ 469

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242004867|ref|XP_002423298.1| Phospholipase A-2-activating protein, putative [Pediculus humanus corporis] gi|212506300|gb|EEB10560.1| Phospholipase A-2-activating protein, putative [Pediculus humanus corporis]

 Score =  346 bits (888), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 202/507 (39%), Positives = 271/507 (53%), Gaps = 120/507 (23%)

Query: 2   YKLSTALYGHSMDVRSLSVTPDG------------------------------------- 24
           YKLS A+YGH  DVRS++VT DG                                     
Sbjct: 5   YKLSCAIYGHKSDVRSVTVTKDGKIVSGSRDMTAKLWAPNESGCGYRECLTFSSHNNFVS 64

Query: 25  --------------CILSASRDKSAKLWKPND----------------LSPGAKVNTLLS 54
                          I++ S DK+ +L+                    + PG + NT+LS
Sbjct: 65  CVCYVPPSNKYCDGVIVTGSNDKAIRLFDGTQTNPFKVLNGHNNTVCKIVPGVQENTILS 124

Query: 55  ASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKT 114
           +SWD +A+LW L S +       HE AVW VIQL  G + TG ADKTIK+ S+ G  L T
Sbjct: 125 SSWDQSARLWDLVSFEILSIFVGHEAAVWSVIQLPCGTVATGSADKTIKIWSKNGTCLNT 184

Query: 115 LTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSV--AAHGDL 172
           L+GHTDC+R LA+      +SCSNDA+IR+W+  +G+C++T +GH +FIYS+        
Sbjct: 185 LSGHTDCIRDLALAASKQILSCSNDATIRLWNVESGQCLNTFFGHGHFIYSIFYIDSTSF 244

Query: 173 ITSGGEDQCVCVYQN-KAQNSFMIPAMSVWAVAILPNSDIVTGSSDGIVRVFSANPDRQA 231
           +TS  ED  V ++ N K  ++  IPA S+W+V   PN DIVTGSS               
Sbjct: 245 LTSS-EDSTVKLWMNGKVVDTIPIPANSIWSVTTAPNGDIVTGSS--------------- 288

Query: 232 EDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQAEDAVQAQYAEEVKKL 291
                                         DG+VRVFS +  RQA       Y EE+ K 
Sbjct: 289 ------------------------------DGVVRVFSTDTSRQASQDELKAYEEEISKS 318

Query: 292 KSANEQEIGGVKVSDLPGKEVLYEPGKADGDVKMVREGSTVVAYSWSEASREWNKLGDVM 351
           +  + Q++ G+K+S+LPG+E L E G  DG  K++REGS V+AY+WSE  R+WN +G+V 
Sbjct: 319 EKNSAQKLEGIKISELPGEEALLEKGLKDGQTKLIREGSKVLAYTWSENERKWNLIGNVT 378

Query: 352 GSAGGTQ-ESSGKVLYQGKEYDFVFSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHLS 410
           GS    + + +GK +YQGKEYDFVFSVD+E GKP LKLPYN ++DPWHAAQ FIH ++LS
Sbjct: 379 GSVENDRVDETGKQVYQGKEYDFVFSVDVEPGKPLLKLPYNKTDDPWHAAQKFIHDNNLS 438

Query: 411 QMFLEQVANFIMTNS---KSKQGPTEY 434
           Q FL++VANFI+ NS   KS  G   Y
Sbjct: 439 QNFLDEVANFIIRNSGYGKSAIGEGRY 465

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|405977739|gb|EKC42173.1| Phospholipase A-2-activating protein [Crassostrea gigas]

 Score =  338 bits (868), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 190/445 (42%), Positives = 258/445 (57%), Gaps = 77/445 (17%)

Query: 8   LYGHSMDVRSLSVTP------DGCILSASRDKSAKLWKPNDLSP---------------G 46
           + GHS  V ++ V P       G +++ S DK+   + P+   P                
Sbjct: 57  MRGHSNFVSAVCVMPPDSTYEQGLLITGSNDKTILGYTPDSPEPVFKLTGHEGNVCTLAA 116

Query: 47  AKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGV-IQLANGIIVTGCADKTIKLH 105
            K  TLLS SWD TA++W   +Q+C +T++ HE AVW V I    G ++TG ADKTIKL 
Sbjct: 117 GKFGTLLSGSWDKTARVWL--NQKCVMTLKGHEAAVWAVGIMPEQGFMLTGSADKTIKLW 174

Query: 106 SEEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYS 165
              G    T  GH DC+RGLAVLN+ +F+SCSNDAS+R W S +G C+   YGH NFIYS
Sbjct: 175 -RAGRCEITFKGHEDCIRGLAVLNNQEFISCSNDASLRRW-SVSGDCLQVYYGHENFIYS 232

Query: 166 VAA--HGDLITSGGEDQCVCVYQN-KAQNSFMIPAMSVWAVAILP-NSDIVTGSSDGIVR 221
           VA   +G    SGGED+ + V+++ K   +   PA SVWAV +LP N DIV+ +S     
Sbjct: 233 VAVLPNGQDFISGGEDRTMRVWRDGKCVQTIAHPAQSVWAVCVLPCNGDIVSAAS----- 287

Query: 222 VFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQAEDAVQ 281
                                                   DG++RVF+  P+R A    Q
Sbjct: 288 ----------------------------------------DGVIRVFTTKPERMAPADEQ 307

Query: 282 AQYAEEVKKLKSANEQEIGGVKVSDLPGKEVLYEPGKADGDVKMVREGSTVVAYSWSEAS 341
             + E+V    SA  +++G VK+ +LPG EVL  PG  DG  K++R G     + W  + 
Sbjct: 308 KSFEEQVAA--SAVPKQLGDVKLEELPGPEVLLNPGSKDGQQKIIRRGPNAELHQWDSSK 365

Query: 342 REWNKLGDVMGSAGGTQESSGKVLYQGKEYDFVFSVDIEEGKPPLKLPYNVSEDPWHAAQ 401
           +EW K+GD++GS+GGTQ+SSGK L++GKEYD+VFSVDIE+GKPPLKLP+NV+EDPW AAQ
Sbjct: 366 QEWTKVGDIVGSSGGTQQSSGKTLFEGKEYDYVFSVDIEDGKPPLKLPFNVTEDPWFAAQ 425

Query: 402 AFIHTHHLSQMFLEQVANFIMTNSK 426
            F+  + LSQ+FL+QVANFI+ N+K
Sbjct: 426 RFLDKNSLSQLFLDQVANFIIDNTK 450

Source: Crassostrea gigas

Species: Crassostrea gigas

Genus: Crassostrea

Family: Ostreidae

Order: Ostreoida

Class: Bivalvia

Phylum: Mollusca

Superkingdom: Eukaryota

>gi|350402175|ref|XP_003486394.1| PREDICTED: phospholipase A-2-activating protein-like [Bombus impatiens]

 Score =  336 bits (861), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 179/452 (39%), Positives = 260/452 (57%), Gaps = 71/452 (15%)

Query: 2   YKLSTALYGHSMDVRSLSV------TPDGCILSASRDKSAKLWKPNDLSP---------- 45
           Y+ +  L GHS  V S+ V       P G I++ S DK+ +++  +   P          
Sbjct: 64  YEHTATLKGHSNFVTSVCVINPSEQNPIGFIITGSHDKTIRIYVSHQTEPINIIKSHQDT 123

Query: 46  ------GAKVNTLLSASWDMTAKLWCL-ESQQCKLTIRQHEMAVWGVIQLANGIIVTGCA 98
                 G K  T LS+SWDM+AKLW L +  + +L +  H  AVW V  L++G I TG A
Sbjct: 124 VCKLTTGTKEGTFLSSSWDMSAKLWSLSDLSKPQLNLLGHTAAVWCVADLSSGSIATGSA 183

Query: 99  DKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYG 158
           DK + + + +G     LTGHTDCVR ++V++  + +SC+NDA++R W+   G C+ T  G
Sbjct: 184 DKLVIIWASDGSVQHKLTGHTDCVRDISVISSNEVLSCANDATVRHWNVCLGTCLGTYCG 243

Query: 159 HPNFIYSVAA--HGDLITSGGEDQCVCVYQN-KAQNSFMIPAMSVWAVAILPNSDIVTGS 215
           H N+IYS+ A  +G  I + GED+ + ++ N +   +  +P  SVW +A LPN DIVTGS
Sbjct: 244 HENYIYSILALENGTSIFTCGEDRTLRIWHNTELSQTITLPTQSVWCLASLPNGDIVTGS 303

Query: 216 SDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQ 275
           SD                                             G+VR+F+ NP+  
Sbjct: 304 SD---------------------------------------------GVVRIFTCNPEEY 318

Query: 276 AEDAVQAQYAEEVKKLKSANEQEIGGVKVSDLPGKEVLYEPGKADGDVKMVREGSTVVAY 335
           A+     ++ ++V  +K   +QE+GG+KV DLP  + L +PG+ DG  K+V +G  V AY
Sbjct: 319 ADPEALEEFEQQVASVKLNAQQELGGIKVKDLPDAKTLLQPGQRDGQTKIVNDGDAVRAY 378

Query: 336 SWSEASREWNKLGDVMGSAGGTQESSGKVLYQGKEYDFVFSVDIEEGKPPLKLPYNVSED 395
           SWS+  + W K+G+VMG++GG+  +SGK LY G EYD+VFSVDI++G PPLKLPYN  +D
Sbjct: 379 SWSQNEQRWIKIGNVMGASGGSVATSGKQLYNGIEYDYVFSVDIQDGVPPLKLPYNNDQD 438

Query: 396 PWHAAQAFIHTHHLSQMFLEQVANFIMTNSKS 427
           PWH AQ F+H + LSQ+FL+QVANFI+ NS+S
Sbjct: 439 PWHVAQKFLHDNSLSQLFLDQVANFIIKNSQS 470

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307196404|gb|EFN77993.1| Phospholipase A-2-activating protein [Harpegnathos saltator]

 Score =  332 bits (852), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 179/451 (39%), Positives = 255/451 (56%), Gaps = 71/451 (15%)

Query: 2   YKLSTALYGHSMDVRSLSV------TPDGCILSASRDKSAKLWKPNDLSP---------- 45
           Y+ S  L GHS  V ++ V      +P+G I++ S D    ++  N+  P          
Sbjct: 52  YEQSALLKGHSNFVSAVCVINPSEKSPNGYIITGSNDNIICVYVANETMPMRTITTHQNT 111

Query: 46  ------GAKVNTLLSASWDMTAKLWCLES-QQCKLTIRQHEMAVWGVIQLANGIIVTGCA 98
                 G K +T LS+SWD+TAKLW +    + +L +  H  AVW V  L NG I+TG A
Sbjct: 112 VCNLRTGKKEDTFLSSSWDLTAKLWDINDLSKPQLNLVGHTAAVWCVADLPNGNIITGSA 171

Query: 99  DKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYG 158
           DK + + S +G     LTGHTDCVR ++ + + +F++C+NDA+IR W++  G C+ T  G
Sbjct: 172 DKLVIVWSRDGTAQHKLTGHTDCVRDISDIKEDEFITCANDATIRHWNAKLGTCLGTYCG 231

Query: 159 HPNFIYSVAA--HGDLITSGGEDQCVCVYQN-KAQNSFMIPAMSVWAVAILPNSDIVTGS 215
           H N+IY +AA  +G  + S GED+ V V+ N +   + ++P  S+W + +  N D+VTGS
Sbjct: 232 HENYIYGIAATINGTYVFSSGEDRTVRVWHNAEISQTIVLPTQSIWCIKLFSNGDVVTGS 291

Query: 216 SDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQ 275
           S                                             DG VR+FS+NP+R 
Sbjct: 292 S---------------------------------------------DGAVRIFSSNPERY 306

Query: 276 AEDAVQAQYAEEVKKLKSANEQEIGGVKVSDLPGKEVLYEPGKADGDVKMVREGSTVVAY 335
           A   +   + +EV       +Q IG + V DLP   VL +PG+ DG  K+V EG TV AY
Sbjct: 307 ANSEMLEAFEKEVANTTLNAQQVIGDMNVRDLPDSRVLLQPGQRDGQTKIVNEGDTVRAY 366

Query: 336 SWSEASREWNKLGDVMGSAGGTQESSGKVLYQGKEYDFVFSVDIEEGKPPLKLPYNVSED 395
           SWS+  + W ++GDVMG++G T  +SGK LY G EYD+VFSVDI++G PPLKLPYN  +D
Sbjct: 367 SWSQNEQRWIRIGDVMGASGSTAATSGKQLYNGIEYDYVFSVDIQDGVPPLKLPYNKGQD 426

Query: 396 PWHAAQAFIHTHHLSQMFLEQVANFIMTNSK 426
           PWH AQ F+H ++LSQ+FL+QVANFI+ NS+
Sbjct: 427 PWHVAQRFLHDNNLSQLFLDQVANFIVKNSE 457

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328707744|ref|XP_001947954.2| PREDICTED: phospholipase A-2-activating protein-like isoform 1 [Acyrthosiphon pisum] gi|328707746|ref|XP_003243489.1| PREDICTED: phospholipase A-2-activating protein-like isoform 2 [Acyrthosiphon pisum]

 Score =  331 bits (848), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 188/517 (36%), Positives = 264/517 (51%), Gaps = 137/517 (26%)

Query: 2   YKLSTALYGHSMDVRSLS------------------------------------------ 19
           YKLS+ LYGH MDVR L+                                          
Sbjct: 3   YKLSSVLYGHVMDVRGLAAGADGYIVSASRDKTAKLWKPNSENAGFTEVQTFKGHTNYVV 62

Query: 20  ---------VTPDGCILSASRDKSAKLWKPND----------------LSPGAKVNTLLS 54
                    + P+G I++   DK    + P                  + PG   NT L+
Sbjct: 63  SVTILKKSDILPNGLIVTGGNDKLMCGFLPESPEPVFTETSHTNTVCKIVPGVLPNTFLT 122

Query: 55  ASWDMTAKLWCLES------QQCKLTI-RQHEMAVWGVIQLANGIIVTGCADKTIKLHS- 106
           +SWDMTA+LW +        Q   LTI + H  AVW  IQL+N  ++T  ADKT+ +H+ 
Sbjct: 123 SSWDMTARLWKITVNPDHTYQPVLLTIFKGHTAAVWSSIQLSNNQVITCSADKTLLIHNI 182

Query: 107 ------EEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHP 160
                      +K LTGHTDCVR LA L   +F+SCSNDA+++ W + TG+C+ T YGHP
Sbjct: 183 LHGDPENSSVAIKKLTGHTDCVRDLAALLGDEFLSCSNDATVKRWSAGTGECIETFYGHP 242

Query: 161 NFIYSVAAH------GDLITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILPNSDIVTG 214
           ++IYS++          L+ +GGED+ + V+Q+  Q   + PA S+WAV ILPN+DIV G
Sbjct: 243 SYIYSLSVFCGTDMTNSLVVTGGEDRYLNVWQSSEQQVILQPAQSIWAVTILPNTDIVIG 302

Query: 215 SSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDR 274
           SSDG++R+FS + +RQA +  QA + E+V  +    ++E+GG+                 
Sbjct: 303 SSDGLIRIFSTDSNRQATNEAQAAFQEQVDNVNQVAQKEVGGI----------------- 345

Query: 275 QAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDLPGKEVLYEPGKADGDVKMVREGSTVVA 334
                                       KV  LPG EVLY+PGK+DG + MV E    + 
Sbjct: 346 ----------------------------KVDSLPGPEVLYKPGKSDGQIIMVNENGKPIC 377

Query: 335 YSWSEASREWNKLGDVMGSAGGTQESSGKVLYQGKEYDFVFSVDIEEGKPPLKLPYNVSE 394
           Y W     +W+K+GDV+ ++        K +++GKEYDFV++VDIE+G PPLKLP+N  E
Sbjct: 378 YKWLSNVGKWDKIGDVLSAS-----DPNKNMHEGKEYDFVWNVDIEDGAPPLKLPFNRDE 432

Query: 395 DPWHAAQAFIHTHHLSQMFLEQVANFIMTNSKSKQGP 431
           DPW  AQAFIH H L Q +LE VANFI++N+K+   P
Sbjct: 433 DPWVVAQAFIHKHDLPQSYLETVANFIISNAKTAPPP 469

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189240740|ref|XP_968238.2| PREDICTED: similar to LOC506073 protein [Tribolium castaneum]

 Score =  329 bits (843), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 197/513 (38%), Positives = 267/513 (52%), Gaps = 125/513 (24%)

Query: 2   YKLSTALYGHSMDVRSLSVT---------------------------------------- 21
           +KLS +L+GHS+DVRS+ VT                                        
Sbjct: 5   FKLSASLFGHSLDVRSVVVTNNNSIISGSRDKTAKFWTPNRIDTGYTPIQTFRDQKNFVI 64

Query: 22  -----------PDGCILSASRDKSAKLWKP-------------NDLSPGAKV-----NTL 52
                      PDG +++   D +  ++KP             N +S  +K      N  
Sbjct: 65  AVLYLEPTSEYPDGLVITGGNDNTIYVYKPSEPFATFTLKEHTNAVSCFSKYSTSNNNAF 124

Query: 53  LSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFL 112
           LS SWD +AKLW L +    +T   H  A+W +IQLA+  IVT  ADKTI + S EG  L
Sbjct: 125 LSGSWDCSAKLWTLGNSTSTVTFSGHLAAIWSIIQLADSRIVTASADKTIGIWSSEGARL 184

Query: 113 KTLTGHTDCVRGLAVLNDT-DFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVA---- 167
            +LTGHTDCVRGL  L++   FVS +NDA+IRVW S  G+    +YGH N+IYS+A    
Sbjct: 185 NSLTGHTDCVRGLVDLSELHQFVSVANDATIRVW-SYAGESQGVLYGHTNYIYSIARCKS 243

Query: 168 AHGDLITSGGEDQCVCVYQNKAQ-NSFMIPAMSVWAVAILPNSDIVTGSSDGIVRVFSAN 226
           A  +   +  ED+ V  +QN     +  +PA SVW+VA L N DIVTGSSD         
Sbjct: 244 AGENCFVTSDEDRTVRFWQNGENIETIQLPAQSVWSVACLSNGDIVTGSSD--------- 294

Query: 227 PDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQAEDAVQAQYAE 286
                                               G+VRVF+ N  R A++A   ++ E
Sbjct: 295 ------------------------------------GVVRVFTQNESRYADEATLNKFNE 318

Query: 287 EVKKLKSANEQEIGGVKVSDLPGKEVLYEPGKADGDVKMVREGSTVVAYSWSEASRE--W 344
           EV+ L   + QEIGG K+SDLPGKE LY+PG+  G +KM+REG+ VVAY+W E   +  W
Sbjct: 319 EVEALTRQSTQEIGGYKISDLPGKEALYDPGRKAGQMKMIREGTGVVAYTWVEDGDKSHW 378

Query: 345 NKLGDVMGSAGGTQESSGKVLYQGKEYDFVFSVDIEEGKPPLKLPYNVSEDPWHAAQAFI 404
            K+GDV+GS   T +   K +Y+GK YDFVFSVD+E+GKPPLKLPYN  +DP+ AA  F+
Sbjct: 379 EKVGDVLGSTDKTNQD--KTMYEGKAYDFVFSVDVEDGKPPLKLPYNKGDDPYQAAHNFL 436

Query: 405 HTHHLSQMFLEQVANFIMTNSKSKQGPTEYDFV 437
             + L   +LEQV +FI+ N++ K  P   ++V
Sbjct: 437 AKNFLPASYLEQVVDFILKNTQEKYVPPSTEYV 469

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307186588|gb|EFN72105.1| Phospholipase A-2-activating protein [Camponotus floridanus]

 Score =  328 bits (840), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 177/452 (39%), Positives = 253/452 (55%), Gaps = 71/452 (15%)

Query: 2   YKLSTALYGHSMDVRSLSV------TPDGCILSASRDKSAKLWKPNDLSP---------- 45
           Y+ S  L GHS  V S+ V       P G I++ S D +  ++  ++  P          
Sbjct: 51  YEQSAILTGHSNFVSSVCVINPSERNPKGYIITGSNDNTICVYIMDETVPVHTITAHQNT 110

Query: 46  ------GAKVNTLLSASWDMTAKLWCLES-QQCKLTIRQHEMAVWGVIQLANGIIVTGCA 98
                 G K +T LS+SWD+TAKLW +    + +L +  H  AVW V  L NG IVTG A
Sbjct: 111 VCNLRTGKKDDTFLSSSWDLTAKLWDVRDLSKPQLNLTGHTAAVWCVADLLNGNIVTGSA 170

Query: 99  DKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYG 158
           DK + + ++ G     LTGHTDC+R +  + + +F++C+NDA+IR W++  G C+ T  G
Sbjct: 171 DKLVIVWAKNGSIQHKLTGHTDCIRDIVDIKEDEFLTCANDATIRHWNAKLGTCLGTYCG 230

Query: 159 HPNFIYSVAA--HGDLITSGGEDQCVCVYQN-KAQNSFMIPAMSVWAVAILPNSDIVTGS 215
           H N+IYS+AA  +G  + S GED+ V V+ N +   + ++P  S+W + +  N DIV GS
Sbjct: 231 HENYIYSIAAIPNGTYVFSSGEDRTVRVWYNAELSQTIVLPTQSIWCIELFSNGDIVAGS 290

Query: 216 SDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQ 275
           S                                             DG VR+FS+NP+R 
Sbjct: 291 S---------------------------------------------DGAVRIFSSNPERY 305

Query: 276 AEDAVQAQYAEEVKKLKSANEQEIGGVKVSDLPGKEVLYEPGKADGDVKMVREGSTVVAY 335
           A       + ++V       +Q IG + + DLP  +VL +PG+ DG  K+V EG  V AY
Sbjct: 306 ANSETLEAFEKQVANTTLNAQQAIGDINIKDLPDAKVLLQPGQRDGQTKIVNEGDAVRAY 365

Query: 336 SWSEASREWNKLGDVMGSAGGTQESSGKVLYQGKEYDFVFSVDIEEGKPPLKLPYNVSED 395
           SWS+  + W K+GDVMG++G T  +SGK LY G EYD+VFSVDI++G PPLKLPYN  +D
Sbjct: 366 SWSQNEQRWIKIGDVMGASGSTAATSGKQLYNGIEYDYVFSVDIQDGVPPLKLPYNKDQD 425

Query: 396 PWHAAQAFIHTHHLSQMFLEQVANFIMTNSKS 427
           PWH AQ F+H ++LSQ++L+QVANFI+ NS+S
Sbjct: 426 PWHVAQQFLHDNNLSQLYLDQVANFIVKNSES 457

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156537301|ref|XP_001606082.1| PREDICTED: phospholipase A-2-activating protein-like [Nasonia vitripennis]

 Score =  324 bits (830), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 175/448 (39%), Positives = 258/448 (57%), Gaps = 76/448 (16%)

Query: 5   STALYGHSMDVRSLSVT------PDGCILSASRDKSAKLWKPNDLSPGAKV----NTL-- 52
           +  + GHS  V S+ +       P G I++ S D    ++ P +  P  K+    NT+  
Sbjct: 52  NVVMRGHSNFVSSVCIINPTQKHPKGLIITGSNDNHIFIYNPGEEQPVHKIKAHENTVCC 111

Query: 53  -----------LSASWDMTAKLWCLES-QQCKLTIRQHEMAVWGVIQLANGIIVTGCADK 100
                      +S+SWD +AK+W L+  ++ ++T   H  AVW V  LANG +VTG ADK
Sbjct: 112 LRTSSLDPTAFVSSSWDFSAKMWSLDDLEKPQMTYLGHSAAVWCVSDLANGSVVTGSADK 171

Query: 101 TIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHP 160
            + ++  +G+ L  L GHTDCVR +AV+N+ +F++C+NDA I+ W + TG C+   YGH 
Sbjct: 172 LVIVYLRDGKVLHKLEGHTDCVRDIAVINENEFLTCANDAVIKHWTAVTGDCLGNFYGHT 231

Query: 161 NFIYSVAAH--GDLITSGGEDQCVCVYQN-KAQNSFMIPAMSVWAVAILPNSDIVTGSSD 217
           N+IYS++A   G L+ S GED+ V V+ N +   +  +P  +VW+V +LPN DIV G+SD
Sbjct: 232 NYIYSLSAFPGGSLVASSGEDRTVRVWCNGEVDQTITLPTQTVWSVKLLPNGDIVCGASD 291

Query: 218 GIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQAE 277
           G+VR+F+A+P+R A+  +  ++ E V   +   +QE+G +K+S                 
Sbjct: 292 GLVRIFTAHPERYADSEIIQRFEESVVNTELKAKQELGDIKMS----------------- 334

Query: 278 DAVQAQYAEEVKKLKSANEQEIGGVKVSDLPGKEVLYEPGKADGDVKMVREGSTVVAYSW 337
                                       DLP   VL +PGK DG+ K+V+E  +V AYSW
Sbjct: 335 ----------------------------DLPDASVLQQPGKKDGETKLVKEDGSVKAYSW 366

Query: 338 SEASREWNKLGDVMGSAGGTQESSGKVLYQGKEYDFVFSVDIEEGKPPLKLPYNVSEDPW 397
           S+   +WN +GDVMG+      ++   ++ G EYD+VFSVDI++G PPLKLPYN  +DPW
Sbjct: 367 SQKDLKWNLIGDVMGAN----SNNSSNMHNGIEYDYVFSVDIQDGVPPLKLPYNKGQDPW 422

Query: 398 HAAQAFIHTHHLSQMFLEQVANFIMTNS 425
           +AAQ FI  + LSQMFLEQVANFI+ NS
Sbjct: 423 YAAQKFIDDNQLSQMFLEQVANFIIKNS 450

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	557
UNIPROTKB|A7Z055	796	PLAA "PLAA protein" [Bos tauru	0.660	0.462	0.313	2.1e-48
UNIPROTKB|Q9Y263	795	PLAA "Phospholipase A-2-activa	0.640	0.449	0.306	2.1e-46
RGD|621245	795	Plaa "phospholipase A2, activa	0.640	0.449	0.309	2.7e-46
UNIPROTKB|P54319	795	Plaa "Phospholipase A-2-activa	0.640	0.449	0.309	2.7e-46
MGI|MGI:104810	794	Plaa "phospholipase A2, activa	0.639	0.448	0.316	1.2e-47
UNIPROTKB|E2RI74	800	PLAA "Uncharacterized protein"	0.660	0.46	0.308	3.6e-47
CGD|CAL0005343	761	DOA1 [Candida albicans (taxid:	0.732	0.536	0.295	5.1e-55
UNIPROTKB|Q5APD6	761	DOA1 "Putative uncharacterized	0.732	0.536	0.295	5.1e-55
FB|FBgn0024314	787	Plap "Phospholipase A2 activat	0.684	0.484	0.348	4e-49
ASPGD|ASPL0000064653	811	AN7704 [Emericella nidulans (t	0.581	0.399	0.322	8.8e-38

UNIPROTKB|A7Z055 PLAA "PLAA protein" [Bos taurus (taxid:9913)]

 Score = 510 (184.6 bits), Expect = 2.1e-48, P = 2.1e-48
 Identities = 121/386 (31%), Positives = 209/386 (54%)

Query:    63 LWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKTLTGHTDCV 122
             ++ LES      ++ H+  V  +     G +++G  D T K+   + + + TL GHT  V
Sbjct:    96 VFSLESPAPLYVLKGHKNTVCSLSSGKFGTLLSGSWDTTAKVWLND-KCMMTLQGHTAAV 154

Query:   123 RGLAVLNDTDFV-SCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGDL-ITSGGEDQ 180
               + +L +   + + S D +I++W +  G+C  T  GH + +  +A   +    S   D 
Sbjct:   155 WAVKILPEQGLMLTGSADKTIKLWKA--GRCERTFSGHEDCVRGLAILSETEFLSCANDA 212

Query:   181 CVCVYQ--NKAQNSFMIPAMSVWAVAILPN-SDIVTGSSDGIVRVFSANPDRQAEDAVQA 237
              +  +Q   +    F      ++++++ PN  D VT + D  +R++      +    ++ 
Sbjct:   213 SIRRWQITGECLEVFYGHTNYIYSISVFPNCKDFVTTAEDRSLRIWKHG---ECAQTIRL 269

Query:   238 QYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQAE-DAVQAQYAEEVKKLKSANE 296
               A+ +      +  +I  V  + DGI+RVF+ + DR A  + ++A   E  +    +  
Sbjct:   270 P-AQSIWCCCVLDNGDI--VVGASDGIIRVFTESEDRTASAEEIKAFERELSQATIDSKT 326

Query:   297 QEIGGVKVSDLPGKEVLYEPGKADGDVKMVREGSTVVAYSWSEASREWNKLGDVMGSAGG 356
              ++G +    LPG+E L EPG  +G  +++R+G  V AY WS   R W K+GDV+GS+G 
Sbjct:   327 GDLGDINAEQLPGREHLNEPGTREGQTRLIRDGEKVEAYQWSINERRWIKIGDVVGSSGA 386

Query:   357 TQESSGKVLYQGKEYDFVFSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHLSQMFLEQ 416
             +Q++SGKVLY+GKE+D+VFS+D+ EG P  KLPYN+++DPW AA  F+  + L+ MFL+Q
Sbjct:   387 SQQTSGKVLYEGKEFDYVFSIDVNEGGPSYKLPYNITDDPWLAAYNFLQKNDLNPMFLDQ 446

Query:   417 VANFIMTNSKSKQ---GPTEYDFVFS 439
             VA FI+ N+K +    G T +   F+
Sbjct:   447 VAKFIIDNTKGQMLGLGNTSFSDPFT 472

GO:0016005 "phospholipase A2 activator activity" evidence=IEA

GO:0006954 "inflammatory response" evidence=IEA

UNIPROTKB|Q9Y263 PLAA "Phospholipase A-2-activating protein" [Homo sapiens (taxid:9606)]

 Score = 492 (178.3 bits), Expect = 2.1e-46, P = 2.1e-46
 Identities = 114/372 (30%), Positives = 200/372 (53%)

Query:    63 LWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKTLTGHTDCV 122
             ++ L+S      ++ H+  V  +     G +++G  D T K+   + + + TL GHT  V
Sbjct:    96 IFSLDSPMPLYILKGHKNTVCSLSSGKFGTLLSGSWDTTAKVWLND-KCMMTLQGHTAAV 154

Query:   123 RGLAVLNDTDFV-SCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGDL-ITSGGEDQ 180
               + +L +   + + S D ++++W +  G+C  T  GH + +  +A   +    S   D 
Sbjct:   155 WAVKILPEQGLMLTGSADKTVKLWKA--GRCERTFSGHEDCVRGLAILSETEFLSCANDA 212

Query:   181 CVCVYQ--NKAQNSFMIPAMSVWAVAILPNS-DIVTGSSDGIVRVFSANPDRQAEDAVQA 237
              +  +Q   +    +      ++++++ PN  D VT + D  +R++      +    ++ 
Sbjct:   213 SIRRWQITGECLEVYYGHTNYIYSISVFPNCRDFVTTAEDRSLRIWKHG---ECAQTIRL 269

Query:   238 QYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQAE-DAVQAQYAEEVKKLKSANE 296
               A+ +      +  +I  V  + DGI+RVF+ + DR A  + ++A   E       +  
Sbjct:   270 P-AQSIWCCCVLDNGDI--VVGASDGIIRVFTESEDRTASAEEIKAFEKELSHATIDSKT 326

Query:   297 QEIGGVKVSDLPGKEVLYEPGKADGDVKMVREGSTVVAYSWSEASREWNKLGDVMGSAGG 356
              ++G +    LPG+E L EPG  +G  +++R+G  V AY WS +   W K+GDV+GS+G 
Sbjct:   327 GDLGDINAEQLPGREHLNEPGTREGQTRLIRDGEKVEAYQWSVSEGRWIKIGDVVGSSGA 386

Query:   357 TQESSGKVLYQGKEYDFVFSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHLSQMFLEQ 416
              Q++SGKVLY+GKE+D+VFS+D+ EG P  KLPYN S+DPW  A  F+  + L+ MFL+Q
Sbjct:   387 NQQTSGKVLYEGKEFDYVFSIDVNEGGPSYKLPYNTSDDPWLTAYNFLQKNDLNPMFLDQ 446

Query:   417 VANFIMTNSKSK 428
             VA FI+ N+K +
Sbjct:   447 VAKFIIDNTKGQ 458

GO:0006954 "inflammatory response" evidence=IEA

GO:0016005 "phospholipase A2 activator activity" evidence=IEA

GO:0070062 "extracellular vesicular exosome" evidence=IDA

GO:0006644 "phospholipid metabolic process" evidence=TAS

GO:0007165 "signal transduction" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

RGD|621245 Plaa "phospholipase A2, activating protein" [Rattus norvegicus (taxid:10116)]

 Score = 491 (177.9 bits), Expect = 2.7e-46, P = 2.7e-46
 Identities = 115/372 (30%), Positives = 201/372 (54%)

Query:    63 LWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKTLTGHTDCV 122
             ++ L+S      ++ H+  V  +     G +++G  D T K+   + + + TL GHT  V
Sbjct:    96 IFSLDSPMPLYILKGHKDTVCSLSSGKFGTLLSGSWDTTAKVWLND-KCMMTLQGHTAAV 154

Query:   123 RGLAVLNDTDFV-SCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGDL-ITSGGEDQ 180
               + +L +   + + S D +I++W +  G+C  T  GH + +  +A   +    S   D 
Sbjct:   155 WAVKILPEQGLMLTGSADKTIKLWKA--GRCERTFSGHEDCVRGLAILSETEFLSCANDA 212

Query:   181 CVCVYQ--NKAQNSFMIPAMSVWAVAILPNS-DIVTGSSDGIVRVFSANPDRQAEDAVQA 237
              +  +Q   +    +      ++++++ PN  D VT + D  +R++      +    ++ 
Sbjct:   213 SIRRWQITGECLGVYYGHTNYIYSISVFPNCRDFVTTAEDRSLRIWKHG---ECAQTIRL 269

Query:   238 QYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQAE-DAVQAQYAEEVKKLKSANE 296
               A+ +      +  +I  V  + DGI+RVF+   +R A  + ++A   E  +    +  
Sbjct:   270 P-AQSIWCCCVLDNGDI--VVGASDGIIRVFTEADERTASAEEIKAFERELSQATIDSKT 326

Query:   297 QEIGGVKVSDLPGKEVLYEPGKADGDVKMVREGSTVVAYSWSEASREWNKLGDVMGSAGG 356
              ++G +    LPG+E L EPG  +G  +++R+G  V AY WS +   W K+GDV+GS+G 
Sbjct:   327 GDLGDINAEQLPGREHLNEPGTREGQTRLIRDGERVEAYQWSVSDGRWIKIGDVVGSSGA 386

Query:   357 TQESSGKVLYQGKEYDFVFSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHLSQMFLEQ 416
              Q++SGKVLY+GKE+D+VFS+D+ EG P  KLPYNVS+DPW  A  F+  + L+ MFL+Q
Sbjct:   387 NQQTSGKVLYEGKEFDYVFSIDVNEGGPSYKLPYNVSDDPWLVAYNFLQKNDLNPMFLDQ 446

Query:   417 VANFIMTNSKSK 428
             VA FI+ N+K +
Sbjct:   447 VAKFIIDNTKGQ 458

GO:0006954 "inflammatory response" evidence=IEA;ISO

GO:0016005 "phospholipase A2 activator activity" evidence=IEA;ISO

GO:0043085 "positive regulation of catalytic activity" evidence=ISO

GO:0070062 "extracellular vesicular exosome" evidence=ISO

UNIPROTKB|P54319 Plaa "Phospholipase A-2-activating protein" [Rattus norvegicus (taxid:10116)]

 Score = 491 (177.9 bits), Expect = 2.7e-46, P = 2.7e-46
 Identities = 115/372 (30%), Positives = 201/372 (54%)

Query:    63 LWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKTLTGHTDCV 122
             ++ L+S      ++ H+  V  +     G +++G  D T K+   + + + TL GHT  V
Sbjct:    96 IFSLDSPMPLYILKGHKDTVCSLSSGKFGTLLSGSWDTTAKVWLND-KCMMTLQGHTAAV 154

Query:   123 RGLAVLNDTDFV-SCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGDL-ITSGGEDQ 180
               + +L +   + + S D +I++W +  G+C  T  GH + +  +A   +    S   D 
Sbjct:   155 WAVKILPEQGLMLTGSADKTIKLWKA--GRCERTFSGHEDCVRGLAILSETEFLSCANDA 212

Query:   181 CVCVYQ--NKAQNSFMIPAMSVWAVAILPNS-DIVTGSSDGIVRVFSANPDRQAEDAVQA 237
              +  +Q   +    +      ++++++ PN  D VT + D  +R++      +    ++ 
Sbjct:   213 SIRRWQITGECLGVYYGHTNYIYSISVFPNCRDFVTTAEDRSLRIWKHG---ECAQTIRL 269

Query:   238 QYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQAE-DAVQAQYAEEVKKLKSANE 296
               A+ +      +  +I  V  + DGI+RVF+   +R A  + ++A   E  +    +  
Sbjct:   270 P-AQSIWCCCVLDNGDI--VVGASDGIIRVFTEADERTASAEEIKAFERELSQATIDSKT 326

Query:   297 QEIGGVKVSDLPGKEVLYEPGKADGDVKMVREGSTVVAYSWSEASREWNKLGDVMGSAGG 356
              ++G +    LPG+E L EPG  +G  +++R+G  V AY WS +   W K+GDV+GS+G 
Sbjct:   327 GDLGDINAEQLPGREHLNEPGTREGQTRLIRDGERVEAYQWSVSDGRWIKIGDVVGSSGA 386

Query:   357 TQESSGKVLYQGKEYDFVFSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHLSQMFLEQ 416
              Q++SGKVLY+GKE+D+VFS+D+ EG P  KLPYNVS+DPW  A  F+  + L+ MFL+Q
Sbjct:   387 NQQTSGKVLYEGKEFDYVFSIDVNEGGPSYKLPYNVSDDPWLVAYNFLQKNDLNPMFLDQ 446

Query:   417 VANFIMTNSKSK 428
             VA FI+ N+K +
Sbjct:   447 VAKFIIDNTKGQ 458

GO:0006954 "inflammatory response" evidence=IEA

GO:0016005 "phospholipase A2 activator activity" evidence=IEA

MGI|MGI:104810 Plaa "phospholipase A2, activating protein" [Mus musculus (taxid:10090)]

 Score = 503 (182.1 bits), Expect = 1.2e-47, P = 1.2e-47
 Identities = 118/373 (31%), Positives = 203/373 (54%)

Query:    63 LWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKTLTGHTDCV 122
             ++ L+S      ++ H+  V  +     G +++G  D T K+   + + + TL GHT  V
Sbjct:    96 IFSLDSPMPLYILKGHKDTVCSLSSGKFGTLLSGSWDTTAKVWLND-KCMMTLQGHTAAV 154

Query:   123 RGLAVLNDTDFV-SCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGDL-ITSGGEDQ 180
               + +L +   + + S D +I++W +  G+C  T  GH + +  +A   +    S   D 
Sbjct:   155 WAVKILPEQGLMLTGSADKTIKLWKA--GRCERTFLGHEDCVRGLAILSETEFLSCANDA 212

Query:   181 CVCVYQ--NKAQNSFMIPAMSVWAVAILPNS-DIVTGSSDGIVRVFSANPDRQAEDAVQA 237
              +  +Q   +    +      ++++++ PNS D VT + D  +R++     +  E A   
Sbjct:   213 SIRRWQITGECLEVYFGHTNYIYSISVFPNSKDFVTTAEDRSLRIW-----KHGECAQTI 267

Query:   238 QYAEEVKKLKSANEQEIGGVKV-SDDGIVRVFSANPDRQAE-DAVQAQYAEEVKKLKSAN 295
             +   +   +      E G + V + DGI+RVF+ + +R A  + ++A   E  +    + 
Sbjct:   268 RLPAQ--SIWCCCVLENGDIVVGASDGIIRVFTESEERTASAEEIKAFERELSQATIDSK 325

Query:   296 EQEIGGVKVSDLPGKEVLYEPGKADGDVKMVREGSTVVAYSWSEASREWNKLGDVMGSAG 355
               ++G +    LPG+E L EPG  +G  +++R+G  V AY WS +   W K+GDV+GS+G
Sbjct:   326 TGDLGDINAEQLPGREHLSEPGTREGQTRLIRDGERVEAYQWSVSDGRWIKIGDVVGSSG 385

Query:   356 GTQESSGKVLYQGKEYDFVFSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHLSQMFLE 415
               Q++SGKVLY+GKE+D+VFS+D+ EG P  KLPYNVS+DPW  A  F+  + L+ MFL+
Sbjct:   386 ANQQTSGKVLYEGKEFDYVFSIDVNEGGPSYKLPYNVSDDPWLVAYNFLQKNDLNPMFLD 445

Query:   416 QVANFIMTNSKSK 428
             QVA FI+ N+K +
Sbjct:   446 QVAKFIIDNTKGQ 458

GO:0005515 "protein binding" evidence=IPI

GO:0006954 "inflammatory response" evidence=IDA

GO:0016005 "phospholipase A2 activator activity" evidence=IDA

GO:0043085 "positive regulation of catalytic activity" evidence=IDA

GO:0070062 "extracellular vesicular exosome" evidence=ISO

UNIPROTKB|E2RI74 PLAA "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 499 (180.7 bits), Expect = 3.6e-47, P = 3.6e-47
 Identities = 119/386 (30%), Positives = 207/386 (53%)

Query:    63 LWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKTLTGHTDCV 122
             ++ LES      ++ H+  V  +     G +++G  D T K+   + + + TL GHT  V
Sbjct:    97 IFSLESPAPLYILKGHKNTVCSLSSGKFGTLLSGSWDTTAKVWLND-KCMMTLQGHTAAV 155

Query:   123 RGLAVLNDTDFV-SCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGDL-ITSGGEDQ 180
               + +L +   + + S D +I++W +  G+C  T  GH + +  +A   +    S   D 
Sbjct:   156 WAVKILPEQGLMLTGSADKTIKLWKA--GRCERTFSGHEDCVRGLAILSEAEFLSCANDA 213

Query:   181 CVCVYQ--NKAQNSFMIPAMSVWAVAILPNS-DIVTGSSDGIVRVFSANPDRQAEDAVQA 237
              +  +Q   +    +      ++++++ PN  D VT + D  +R++      +    ++ 
Sbjct:   214 SIRRWQITGECLEVYYGHTNYIYSISVFPNCRDFVTTAEDRSLRIWKHG---ECAQTIRL 270

Query:   238 QYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQAE-DAVQAQYAEEVKKLKSANE 296
               A+ +      +  +I  V  + DGI+RVF+ + DR A  + ++A   E  +    +  
Sbjct:   271 P-AQSIWCCCVLDNGDI--VVGASDGIIRVFTESEDRIASAEEIKAFEKELSQATIDSKT 327

Query:   297 QEIGGVKVSDLPGKEVLYEPGKADGDVKMVREGSTVVAYSWSEASREWNKLGDVMGSAGG 356
              ++G +    LPG+E L EPG  +G  +++R+G  V AY WS +   W K+GDV+GS+G 
Sbjct:   328 GDLGDINAEQLPGREHLNEPGTREGQTRLIRDGEKVEAYQWSVSEGRWIKIGDVVGSSGA 387

Query:   357 TQESSGKVLYQGKEYDFVFSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHLSQMFLEQ 416
              Q++SGKVLY+GKE+D+VFS+D+ EG P  KLPYN+S+DPW  A  F+  + L+ MFL+Q
Sbjct:   388 NQQTSGKVLYEGKEFDYVFSIDVNEGGPSYKLPYNISDDPWLTAYNFLQKNDLNPMFLDQ 447

Query:   417 VANFIMTNSKSKQ---GPTEYDFVFS 439
             VA FI+ N+K +    G T +   F+
Sbjct:   448 VAKFIIDNTKGQMLGLGNTSFSDPFT 473

GO:0016005 "phospholipase A2 activator activity" evidence=IEA

GO:0006954 "inflammatory response" evidence=IEA

CGD|CAL0005343 DOA1 [Candida albicans (taxid:5476)]

 Score = 458 (166.3 bits), Expect = 5.1e-55, Sum P(2) = 5.1e-55
 Identities = 134/453 (29%), Positives = 225/453 (49%)

Query:     2 YKLSTALYGHSMDVRSLSVTPDGCILSASRDKSAKLWK---------------PND--LS 44
             YKLS+ L GH  DV+ ++ T  G ++S SRD + ++W                P +  ++
Sbjct:     3 YKLSSTLLGHEQDVKDVATTEYGGLVSVSRDGTTRIWSDIYTTHSEATIVFHSPTNSFIN 62

Query:    45 PGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKL 104
               A +N L+++    T      E  + K  +  HE  V  +   ++G +++   D T  +
Sbjct:    63 SVACINGLIASGGQDTMIYLSDEHGEDKYQLIGHEGNVCSM-SYSHGQLISSSWDCTAIV 121

Query:   105 HSEEGEFLKT--LTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKC-VHTMYGHPN 161
              + + EF+    L+GH   V    VL +  +++CS D +IR W    GK  V    GH +
Sbjct:   122 WNLK-EFVPKYILSGHESSVWDCQVLGEDHYLTCSADKTIRFWH---GKSEVKQFVGHSD 177

Query:   162 FIYS--VAAHGDLITSGGEDQCVCVYQ---NKAQNSFMIPAMSVWAVAILPNSDIVTGSS 216
              I    +   G+   S   D  + ++     K   +F      V+ +A++ N   V+   
Sbjct:   178 VIRKLLILEGGEQFLSCSNDGTIKLWDLQTGKNLQTFYGHESFVYDLALIANGKFVSTGE 237

Query:   217 DGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQA 276
             D  VR++        +       +          +  +GG     D +VRVF+A+P++ A
Sbjct:   238 DRTVRIWDLATGNVLQVITLPCISVWCVTALPNGDFAVGG----SDNLVRVFTAHPEKVA 293

Query:   277 EDAVQAQYAEEVKKLKSANEQEIGGVKVSDLPGKEVLYEPGKADGDVKMVR--EGSTVVA 334
              +    ++ E V+   S  EQ +  +K +D+PG E L +PGK +G   MV+  +  T+ A
Sbjct:   294 PEEELLKFKEAVQS-SSIAEQSLDDLKKTDIPGYEALSQPGKQEGSTIMVKNPDNGTIEA 352

Query:   335 YSWSEASREWNKLGDVMGSAGGTQESSGKV-LYQGKEYDFVFSVDIEEGKPPLKLPYNVS 393
             + WS    EW+K+GDV+GS+     SSGK   YQGKEYDFVF VDI++G+PPLKLPYNV+
Sbjct:   353 HQWSGG--EWHKIGDVVGSS-----SSGKKQTYQGKEYDFVFDVDIKDGEPPLKLPYNVN 405

Query:   394 EDPWHAAQAFIHTHHLSQMFLEQVANFIMTNSK 426
             ++P+  A+ F+  + L   + ++V  F+  N++
Sbjct:   406 DNPYTVAEKFLSDNDLPASYTDEVVRFLQKNTE 438

GO:0004620 "phospholipase activity" evidence=IMP

GO:0006511 "ubiquitin-dependent protein catabolic process" evidence=ISS

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0043130 "ubiquitin binding" evidence=IEA

GO:0030447 "filamentous growth" evidence=IMP

GO:0044182 "filamentous growth of a population of unicellular organisms" evidence=IMP

GO:1900429 "negative regulation of filamentous growth of a population of unicellular organisms" evidence=IMP

GO:0043161 "proteasomal ubiquitin-dependent protein catabolic process" evidence=IEA

GO:0006303 "double-strand break repair via nonhomologous end joining" evidence=IEA

UNIPROTKB|Q5APD6 DOA1 "Putative uncharacterized protein DOA1" [Candida albicans SC5314 (taxid:237561)]

 Score = 458 (166.3 bits), Expect = 5.1e-55, Sum P(2) = 5.1e-55
 Identities = 134/453 (29%), Positives = 225/453 (49%)

Query:     2 YKLSTALYGHSMDVRSLSVTPDGCILSASRDKSAKLWK---------------PND--LS 44
             YKLS+ L GH  DV+ ++ T  G ++S SRD + ++W                P +  ++
Sbjct:     3 YKLSSTLLGHEQDVKDVATTEYGGLVSVSRDGTTRIWSDIYTTHSEATIVFHSPTNSFIN 62

Query:    45 PGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKL 104
               A +N L+++    T      E  + K  +  HE  V  +   ++G +++   D T  +
Sbjct:    63 SVACINGLIASGGQDTMIYLSDEHGEDKYQLIGHEGNVCSM-SYSHGQLISSSWDCTAIV 121

Query:   105 HSEEGEFLKT--LTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKC-VHTMYGHPN 161
              + + EF+    L+GH   V    VL +  +++CS D +IR W    GK  V    GH +
Sbjct:   122 WNLK-EFVPKYILSGHESSVWDCQVLGEDHYLTCSADKTIRFWH---GKSEVKQFVGHSD 177

Query:   162 FIYS--VAAHGDLITSGGEDQCVCVYQ---NKAQNSFMIPAMSVWAVAILPNSDIVTGSS 216
              I    +   G+   S   D  + ++     K   +F      V+ +A++ N   V+   
Sbjct:   178 VIRKLLILEGGEQFLSCSNDGTIKLWDLQTGKNLQTFYGHESFVYDLALIANGKFVSTGE 237

Query:   217 DGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQA 276
             D  VR++        +       +          +  +GG     D +VRVF+A+P++ A
Sbjct:   238 DRTVRIWDLATGNVLQVITLPCISVWCVTALPNGDFAVGG----SDNLVRVFTAHPEKVA 293

Query:   277 EDAVQAQYAEEVKKLKSANEQEIGGVKVSDLPGKEVLYEPGKADGDVKMVR--EGSTVVA 334
              +    ++ E V+   S  EQ +  +K +D+PG E L +PGK +G   MV+  +  T+ A
Sbjct:   294 PEEELLKFKEAVQS-SSIAEQSLDDLKKTDIPGYEALSQPGKQEGSTIMVKNPDNGTIEA 352

Query:   335 YSWSEASREWNKLGDVMGSAGGTQESSGKV-LYQGKEYDFVFSVDIEEGKPPLKLPYNVS 393
             + WS    EW+K+GDV+GS+     SSGK   YQGKEYDFVF VDI++G+PPLKLPYNV+
Sbjct:   353 HQWSGG--EWHKIGDVVGSS-----SSGKKQTYQGKEYDFVFDVDIKDGEPPLKLPYNVN 405

Query:   394 EDPWHAAQAFIHTHHLSQMFLEQVANFIMTNSK 426
             ++P+  A+ F+  + L   + ++V  F+  N++
Sbjct:   406 DNPYTVAEKFLSDNDLPASYTDEVVRFLQKNTE 438

GO:0004620 "phospholipase activity" evidence=IMP

GO:0006511 "ubiquitin-dependent protein catabolic process" evidence=ISS

GO:0030447 "filamentous growth" evidence=IMP

GO:0044182 "filamentous growth of a population of unicellular organisms" evidence=IMP

GO:1900429 "negative regulation of filamentous growth of a population of unicellular organisms" evidence=IMP

FB|FBgn0024314 Plap "Phospholipase A2 activator protein" [Drosophila melanogaster (taxid:7227)]

 Score = 516 (186.7 bits), Expect = 4.0e-49, P = 4.0e-49
 Identities = 141/405 (34%), Positives = 213/405 (52%)

Query:    52 LLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQ-LANGIIVTGCADKTIKLH--SEE 108
             + +AS D T  ++  +     LT++ HE  V  +   L    +++G  DKT ++   SE 
Sbjct:    81 ICTASNDATICIYKQDGFVPLLTLKGHESTVCALSAGLEPRSLISGSWDKTARVWTISEA 140

Query:   109 GEF-LKTLTGHTDCVRGLAVLNDT-DFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSV 166
             G+     L GH   V  +A L +   +V+   D +I  W++  G+ +  + GH + +  V
Sbjct:   141 GDVSFVALEGHEAAVWAVATLKEQRKYVTGGADRNIYYWNAK-GEKLRLLKGHTDCVRGV 199

Query:   167 AA-HGDLITSGGEDQCVCVYQNKAQNSFMIPAMS--VWAVA---ILPNSDIVTGSSDGIV 220
                  + + S G D  +  +    +    +   S  ++++A    L +  +V+   D  +
Sbjct:   200 MGLDANTLLSCGNDAVLRFWNEDGECVREMNGHSNYIYSMARNEALGDQVVVSCGEDSTL 259

Query:   221 RVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVS-DDGIVRVFSANPDRQAEDA 279
             R+++        D + A        + S    + G +     DG+VRVFS  P RQA +A
Sbjct:   260 RMWNVITG----DELGAPIIHPGISVWSVTCLQNGDIVTGCSDGVVRVFSHVPARQASEA 315

Query:   280 VQAQYAEEVKKLKSANEQEIGGVKVSDLPGKEVLYEPGKADGDVKMVREGS-TVVAYSWS 338
             V   +   V   KS   +EIGGVK +DLPG E L   G  +G  KMVR    +V  Y+W+
Sbjct:   316 VLKAFDLVVATRKSQINEEIGGVKKTDLPGPEALLSNGTREGQTKMVRHADGSVKCYTWT 375

Query:   339 EASREWNKLGDVMGSAGGTQESSGKVLYQGKEYDFVFSVDIEEGKPPLKLPYNVSEDPWH 398
               +  WN +GDV G+ GGTQ +SGK L++GKEYDFVFSVDI + +PP+KLPYN S+DPW 
Sbjct:   376 LGN--WNLVGDVTGATGGTQSNSGKKLHEGKEYDFVFSVDISDTEPPIKLPYNRSDDPWQ 433

Query:   399 AAQAFIHTHHLSQMFLEQVANFIMTNSKS----KQGPTEYDFVFS 439
             AAQ FIH H L Q +L+QVANFI+ NS+     +Q PT Y   F+
Sbjct:   434 AAQNFIHRHSLPQAYLDQVANFIIKNSEGPVLMEQAPTGYQDPFT 478

GO:0045169 "fusome" evidence=NAS

GO:0016005 "phospholipase A2 activator activity" evidence=ISS;NAS

GO:0008150 "biological_process" evidence=ND

ASPGD|ASPL0000064653 AN7704 [Emericella nidulans (taxid:162425)]

 Score = 379 (138.5 bits), Expect = 8.8e-38, Sum P(2) = 8.8e-38
 Identities = 114/354 (32%), Positives = 178/354 (50%)

Query:    93 IVTGCADKTIKL-HSEEGEFLKTLTGHTDCVRG-LAVLNDTDFVSCSNDASIRVWDSTTG 150
             IV+G  D T +L    + E    L  H   V   LA   +T    C+ D  IR+++S+ G
Sbjct:   150 IVSGSWDSTARLWRIGKWESEVVLEDHQGSVWAVLAYDKNTIITGCA-DNIIRIFNSS-G 207

Query:   151 KCVHTMYGHPNFIYSVA----AH--GDLITSGGEDQCVCVY--QNKAQNSFMIPAMSVWA 202
             K +  +    + + ++      H  G    S   D  + ++  Q             +++
Sbjct:   208 KLLKRIKDSRDVVRALCKLPPTHPTGANFVSASNDGVIRLFTLQGDLVGELHGHESFIYS 267

Query:   203 VAILPNSDIVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKV-SD 261
             +A+LP  ++V+   D  VR+++          VQ      +     A   E G +   + 
Sbjct:   268 LAVLPTGELVSSGEDRTVRIWNET------QCVQTITHPAISVWGVAVCPENGDIVTGAS 321

Query:   262 DGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDLPGKEVLYEP-GKAD 320
             D + RVF+  P+RQA   V  Q+   V++  +   Q++G +    LPG E L +  G  D
Sbjct:   322 DRVTRVFTRAPERQASAEVLQQFETAVRE-SAIPAQQVGKINKEKLPGPEFLQQKSGTKD 380

Query:   321 GDVKMVREGS-TVVAYSWSEASREWNKLGDVMGSAGGTQESSG-KVLYQGKEYDFVFSVD 378
             G V+M+RE + +V A++WS A   W  +G V+ SAG    SSG K  Y G++YDFVF VD
Sbjct:   381 GQVQMIREANGSVTAHTWSAALGRWESVGTVVDSAG----SSGRKTEYLGQDYDFVFDVD 436

Query:   379 IEEGKPPLKLPYNVSEDPWHAAQAFIHTHHLSQMFLEQVANFIMTNSKSKQGPT 432
             +E+GKPPLKLPYN+S++P+ AA  FI  + L   +L+QVA FI+ N+   QG T
Sbjct:   437 VEDGKPPLKLPYNLSQNPYEAATKFIGDNELPMSYLDQVAQFIVQNT---QGAT 487

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0033554 "cellular response to stress" evidence=IEA

GO:0043161 "proteasomal ubiquitin-dependent protein catabolic process" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	557
pfam09070	116	pfam09070, PFU, PFU (PLAA family ubiquitin binding	8e-51
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	1e-44
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	4e-43
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	9e-31
pfam09070	116	pfam09070, PFU, PFU (PLAA family ubiquitin binding	1e-22
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	4e-20
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	3e-16
smart00320	40	smart00320, WD40, WD40 repeats	5e-06
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	1e-05
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	2e-04
smart00320	40	smart00320, WD40, WD40 repeats	4e-04
smart00320	40	smart00320, WD40, WD40 repeats	8e-04
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	0.002

>gnl|CDD|204121 pfam09070, PFU, PFU (PLAA family ubiquitin binding)

 Score =  169 bits (431), Expect = 8e-51
 Identities = 62/116 (53%), Positives = 80/116 (68%), Gaps = 4/116 (3%)

Query: 315 EPGKADGDVKMVREGS-TVVAYSWSEASREWNKLGDVMGSAGGTQESSGKVLYQGKEYDF 373
            PGK +G VKMV+ G   V AY WSE    W K+GDV+     +  SSGKVL++GKEYD+
Sbjct: 2   RPGKKEGQVKMVKNGDGKVEAYQWSEG--RWVKIGDVVDGPA-SGASSGKVLFEGKEYDY 58

Query: 374 VFSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHLSQMFLEQVANFIMTNSKSKQ 429
           VF VDIE+G PPLKLPYNV ++P+ AA+ FI  + L Q +L+QV NFI+ N+K   
Sbjct: 59  VFDVDIEDGGPPLKLPYNVGDNPYEAAEKFIARNELPQSYLDQVVNFIIKNTKGVT 114

This domain is found N terminal to pfam08324 and binds to ubiquitin. Length = 116

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score =  159 bits (404), Expect = 1e-44
 Identities = 81/250 (32%), Positives = 122/250 (48%), Gaps = 32/250 (12%)

Query: 4   LSTALYGHSMDVRSLSVTPDG-CILSASRDKSAKLWKPNDLSPGAKVNTL---------- 52
           L   L GH+  VR ++ + DG  + S S DK+ +LW   DL  G  V TL          
Sbjct: 43  LLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLW---DLETGECVRTLTGHTSYVSSV 99

Query: 53  ---------LSASWDMTAKLWCLESQQCKLTIRQHEMAVWGV-IQLANGIIVTGCADKTI 102
                     S+S D T K+W +E+ +C  T+R H   V  V        + +   D TI
Sbjct: 100 AFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTI 159

Query: 103 KLHS-EEGEFLKTLTGHTDCVRGLAVLND-TDFVSCSNDASIRVWDSTTGKCVHTMYGHP 160
           KL     G+ + TLTGHT  V  +A   D    +S S+D +I++WD +TGKC+ T+ GH 
Sbjct: 160 KLWDLRTGKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHE 219

Query: 161 NFIYSVAAH--GDLITSGGEDQCVCVYQ-NKAQNSFMIPA--MSVWAVAILPN-SDIVTG 214
           N + SVA    G L+ SG ED  + V+     +    +     SV ++A  P+   + +G
Sbjct: 220 NGVNSVAFSPDGYLLASGSEDGTIRVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLASG 279

Query: 215 SSDGIVRVFS 224
           S+DG +R++ 
Sbjct: 280 SADGTIRIWD 289

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score =  155 bits (393), Expect = 4e-43
 Identities = 89/299 (29%), Positives = 130/299 (43%), Gaps = 46/299 (15%)

Query: 4   LSTALYGHSMDVRSLSVTPDG-CILSASRDKSAKLWKPNDLSPGAKV------------- 49
           L   L GH+  V  ++ +PDG  + + S D + K+W   DL  G  +             
Sbjct: 1   LRRTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVW---DLETGELLRTLKGHTGPVRDV 57

Query: 50  ------NTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTI 102
                   L S S D T +LW LE+ +C  T+  H   V  V    +G I+ +   DKTI
Sbjct: 58  AASADGTYLASGSSDKTIRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTI 117

Query: 103 KLHS-EEGEFLKTLTGHTDCVRGLAVLNDTDFV-SCSNDASIRVWDSTTGKCVHTMYGHP 160
           K+   E G+ L TL GHTD V  +A   D  FV S S D +I++WD  TGKCV T+ GH 
Sbjct: 118 KVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTGHT 177

Query: 161 NFIYSVAAHGD--LITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVAILPNSDIVTGS 215
             + SVA   D   + S   D  + ++         +       V +VA  P+  ++   
Sbjct: 178 GEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSVAFSPDGYLLASG 237

Query: 216 S-DGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPD 273
           S DG +RV+                 E V+ L S +   +  +  S DG  R+ S + D
Sbjct: 238 SEDGTIRVWDLRT------------GECVQTL-SGHTNSVTSLAWSPDGK-RLASGSAD 282

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score =  121 bits (305), Expect = 9e-31
 Identities = 60/190 (31%), Positives = 86/190 (45%), Gaps = 30/190 (15%)

Query: 2   YKLSTALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTA 61
            K  T L GH+  V S++ +PDG                           + S+S D T 
Sbjct: 125 GKCLTTLRGHTDWVNSVAFSPDG-------------------------TFVASSSQDGTI 159

Query: 62  KLWCLESQQCKLTIRQHEMAVWGVIQLANGI-IVTGCADKTIKLHS-EEGEFLKTLTGHT 119
           KLW L + +C  T+  H   V  V    +G  +++  +D TIKL     G+ L TL GH 
Sbjct: 160 KLWDLRTGKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHE 219

Query: 120 DCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGD--LITSG 176
           + V  +A   D     S S D +IRVWD  TG+CV T+ GH N + S+A   D   + SG
Sbjct: 220 NGVNSVAFSPDGYLLASGSEDGTIRVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLASG 279

Query: 177 GEDQCVCVYQ 186
             D  + ++ 
Sbjct: 280 SADGTIRIWD 289

Length = 289

>gnl|CDD|204121 pfam09070, PFU, PFU (PLAA family ubiquitin binding)

 Score = 92.7 bits (231), Expect = 1e-22
 Identities = 29/54 (53%), Positives = 39/54 (72%)

Query: 474 SVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHLSQMFLEQVANFIMTNSKSKQ 527
            VDIE+G PPLKLPYNV ++P+ AA+ FI  + L Q +L+QV NFI+ N+K   
Sbjct: 61  DVDIEDGGPPLKLPYNVGDNPYEAAEKFIARNELPQSYLDQVVNFIIKNTKGVT 114

This domain is found N terminal to pfam08324 and binds to ubiquitin. Length = 116

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 92.8 bits (229), Expect = 4e-20
 Identities = 71/301 (23%), Positives = 127/301 (42%), Gaps = 34/301 (11%)

Query: 2   YKLSTALYGHSMDVRSLSVTPDG--CILSASRDKSAKLWKPNDLSPGAKVNT-------- 51
            KL   L GHS  V SL+ +PDG      +S D + KLW      P + +          
Sbjct: 145 GKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSL 204

Query: 52  ---------LLSASWDMTAKLW-CLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKT 101
                    + S S D T +LW     +  + T+  H  +V         ++ +G +D T
Sbjct: 205 AFSPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSVVSSFSPDGSLLASGSSDGT 264

Query: 102 IKLHS--EEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHTM-- 156
           I+L         L+TL+GH+  V  +A   D     S S+D ++R+WD  TGK + ++  
Sbjct: 265 IRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSSLTL 324

Query: 157 YGHPNFIYSVAAHGD---LITSGGEDQCVCVYQNKAQNSFMIPAM--SVWAVAILPNSDI 211
            GH   + S++   D   L++ G +D  + ++  +            +V +V+  P+  +
Sbjct: 325 KGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGKPLKTLEGHSNVLSVSFSPDGRV 384

Query: 212 V-TGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSA 270
           V +GS+DG VR++  +    +       +   V  L  + + +      S D  +R++  
Sbjct: 385 VSSGSTDGTVRLW--DLSTGSLLRNLDGHTSRVTSLDFSPDGKS-LASGSSDNTIRLWDL 441

Query: 271 N 271
            
Sbjct: 442 K 442

Length = 466

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 80.9 bits (198), Expect = 3e-16
 Identities = 58/238 (24%), Positives = 96/238 (40%), Gaps = 32/238 (13%)

Query: 5   STALYGHSMDVRSLSVTPDG-CILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKL 63
           S  L GH   + S++ +PDG  +LS S D + KLW  ++      + +L        +KL
Sbjct: 58  SLLLRGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDN--GEKLIKSLEGLHDSSVSKL 115

Query: 64  WCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEF--LKTLTGHTDC 121
                                     + ++ +   D T+KL         ++TL GH++ 
Sbjct: 116 A------------------LSSPDGNSILLASSSLDGTVKLWDLSTPGKLIRTLEGHSES 157

Query: 122 VRGLAVLNDTD--FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGD---LITSG 176
           V  LA   D        S D +I++WD  TGK + T+ GH + + S+A   D   LI SG
Sbjct: 158 VTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASG 217

Query: 177 GEDQCVCVY--QNKAQNSFMIPAMSVWAVAILP--NSDIVTGSSDGIVRVFSANPDRQ 230
             D  + ++           +   S   V+      S + +GSSDG +R++       
Sbjct: 218 SSDGTIRLWDLSTGKLLRSTLSGHSDSVVSSFSPDGSLLASGSSDGTIRLWDLRSSSS 275

Length = 466

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 43.1 bits (102), Expect = 5e-06
 Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 1/39 (2%)

Query: 109 GEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVWD 146
           GE LKTL GHT  V  +A   D     S S+D +I++WD
Sbjct: 2   GELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 42.0 bits (99), Expect = 1e-05
 Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 1/39 (2%)

Query: 109 GEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVWD 146
           G+ L+TL GHT  V  +A   D +   S S+D ++RVWD
Sbjct: 1   GKLLRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39

Length = 39

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 38.9 bits (91), Expect = 2e-04
 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)

Query: 3  KLSTALYGHSMDVRSLSVTPDGCIL-SASRDKSAKLWK 39
          KL   L GH+  V S++ +PDG +L S S D + ++W 
Sbjct: 2  KLLRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39

Length = 39

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 38.1 bits (89), Expect = 4e-04
 Identities = 11/39 (28%), Positives = 21/39 (53%), Gaps = 2/39 (5%)

Query: 149 TGKCVHTMYGHPNFIYSVAAH--GDLITSGGEDQCVCVY 185
           +G+ + T+ GH   + SVA    G  + SG +D  + ++
Sbjct: 1   SGELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLW 39

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 36.9 bits (86), Expect = 8e-04
 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)

Query: 3  KLSTALYGHSMDVRSLSVTPDG-CILSASRDKSAKLWK 39
          +L   L GH+  V S++ +PDG  + S S D + KLW 
Sbjct: 3  ELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 35.8 bits (83), Expect = 0.002
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 150 GKCVHTMYGHPNFIYSVAAHGD--LITSGGEDQCVCVY 185
           GK + T+ GH   + SVA   D  L+ SG +D  V V+
Sbjct: 1   GKLLRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVW 38

Length = 39

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	557
KOG0301|consensus	745		100.0
KOG0301|consensus	745		100.0
KOG0271|consensus	480		100.0
KOG0271|consensus	480		100.0
KOG0286|consensus	343		100.0
KOG0279|consensus	315		100.0
KOG0272|consensus	459		100.0
PF09070	116	PFU: PFU (PLAA family ubiquitin binding); InterPro	100.0
KOG0272|consensus	459		100.0
KOG0645|consensus	312		100.0
KOG0285|consensus	460		100.0
KOG0284|consensus	464		100.0
KOG0281|consensus	499		100.0
KOG0263|consensus	707		99.97
KOG0295|consensus	406		99.97
KOG0276|consensus	794		99.97
KOG0265|consensus	338		99.97
KOG0273|consensus	524		99.97
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	99.97
KOG0291|consensus	893		99.97
KOG0319|consensus	775		99.97
KOG0266|consensus	456		99.97
KOG0286|consensus	343		99.97
KOG0291|consensus	893		99.97
PLN00181	793	protein SPA1-RELATED; Provisional	99.97
KOG0273|consensus	524		99.97
KOG0284|consensus	464		99.97
KOG0315|consensus	311		99.97
KOG0279|consensus	315		99.97
KOG0295|consensus	406		99.96
KOG0316|consensus	307		99.96
KOG0263|consensus	707		99.96
KOG0282|consensus	503		99.96
KOG0313|consensus	423		99.96
KOG0293|consensus	519		99.96
KOG0319|consensus	775		99.96
KOG0285|consensus	460		99.96
KOG0277|consensus	311		99.96
KOG0281|consensus	499		99.96
KOG0292|consensus	1202		99.96
KOG0318|consensus	603		99.95
KOG0306|consensus	888		99.95
KOG0645|consensus	312		99.95
KOG0266|consensus	456		99.95
KOG0296|consensus	399		99.95
KOG0274|consensus	537		99.95
KOG0318|consensus	603		99.95
KOG0315|consensus	311		99.95
KOG0276|consensus	794		99.95
KOG0274|consensus	537		99.95
KOG0292|consensus	1202		99.95
KOG0275|consensus	508		99.95
KOG0283|consensus	712		99.95
KOG0278|consensus	334		99.95
KOG0300|consensus	481		99.94
KOG0313|consensus	423		99.93
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	99.93
KOG0293|consensus	519		99.93
KOG0277|consensus	311		99.93
KOG0296|consensus	399		99.93
KOG0265|consensus	338		99.93
KOG0288|consensus	459		99.93
KOG1407|consensus	313		99.93
KOG0268|consensus	433		99.93
PTZ00421	493	coronin; Provisional	99.92
PTZ00420	568	coronin; Provisional	99.92
KOG0294|consensus	362		99.92
KOG0299|consensus	479		99.92
KOG0278|consensus	334		99.92
PLN00181	793	protein SPA1-RELATED; Provisional	99.92
KOG0308|consensus	735		99.92
PTZ00421	493	coronin; Provisional	99.92
KOG0264|consensus	422		99.92
KOG0282|consensus	503		99.92
KOG0640|consensus	430		99.91
PTZ00420	568	coronin; Provisional	99.91
KOG0772|consensus	641		99.91
KOG1036|consensus	323		99.91
KOG0647|consensus	347		99.91
KOG0316|consensus	307		99.91
KOG0310|consensus	487		99.91
KOG0308|consensus	735		99.91
KOG0641|consensus	350		99.91
KOG2096|consensus	420		99.9
KOG1446|consensus	311		99.9
KOG0973|consensus	942		99.9
KOG0643|consensus	327		99.9
KOG0640|consensus	430		99.9
KOG0310|consensus	487		99.9
KOG0300|consensus	481		99.9
KOG0306|consensus	888		99.89
KOG0275|consensus	508		99.89
KOG1332|consensus	299		99.89
KOG0289|consensus	506		99.89
KOG0305|consensus	484		99.89
KOG0305|consensus	484		99.89
KOG1408|consensus	1080		99.88
KOG0283|consensus	712		99.88
KOG0643|consensus	327		99.88
KOG0641|consensus	350		99.88
KOG0289|consensus	506		99.88
KOG0269|consensus	839		99.88
KOG0299|consensus	479		99.88
KOG0973|consensus	942		99.87
KOG1332|consensus	299		99.87
KOG0302|consensus	440		99.87
KOG0639|consensus	705		99.85
KOG4283|consensus	397		99.85
KOG0270|consensus	463		99.85
KOG1407|consensus	313		99.85
KOG0264|consensus	422		99.85
KOG2445|consensus	361		99.85
KOG0268|consensus	433		99.85
KOG1063|consensus	764		99.85
KOG0288|consensus	459		99.84
KOG2048|consensus	691		99.84
KOG1408|consensus	1080		99.84
KOG0646|consensus	476		99.84
KOG0647|consensus	347		99.83
KOG1274|consensus	933		99.83
KOG0772|consensus	641		99.83
KOG0267|consensus	825		99.83
KOG2445|consensus	361		99.82
KOG2106|consensus	626		99.82
KOG0321|consensus	720		99.82
KOG1063|consensus	764		99.82
KOG1036|consensus	323		99.82
KOG0294|consensus	362		99.82
KOG1446|consensus	311		99.81
KOG1034|consensus	385		99.81
KOG2106|consensus	626		99.81
KOG0646|consensus	476		99.81
KOG0270|consensus	463		99.8
KOG0269|consensus	839		99.8
PF09070	116	PFU: PFU (PLAA family ubiquitin binding); InterPro	99.8
KOG0267|consensus	825		99.79
KOG0639|consensus	705		99.79
KOG2055|consensus	514		99.79
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.79
KOG1539|consensus	910		99.78
KOG2048|consensus	691		99.78
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.77
KOG0650|consensus	733		99.76
KOG4283|consensus	397		99.76
KOG4378|consensus	673		99.75
KOG1445|consensus	1012		99.75
COG2319	466	FOG: WD40 repeat [General function prediction only	99.74
KOG1273|consensus	405		99.74
KOG1539|consensus	910		99.74
KOG4328|consensus	498		99.73
KOG0303|consensus	472		99.73
KOG1274|consensus	933		99.73
KOG0642|consensus	577		99.72
KOG0321|consensus	720		99.71
KOG0302|consensus	440		99.71
KOG0307|consensus	1049		99.71
KOG0649|consensus	325		99.7
KOG0303|consensus	472		99.7
KOG2919|consensus	406		99.69
KOG1273|consensus	405		99.69
KOG1538|consensus	1081		99.67
KOG2055|consensus	514		99.67
KOG2096|consensus	420		99.67
KOG1007|consensus	370		99.66
KOG1524|consensus	737		99.66
KOG0307|consensus	1049		99.66
KOG1188|consensus	376		99.66
KOG1007|consensus	370		99.64
KOG4328|consensus	498		99.64
COG2319	466	FOG: WD40 repeat [General function prediction only	99.63
KOG1445|consensus	1012		99.62
KOG1188|consensus	376		99.62
KOG1517|consensus	1387		99.61
KOG4378|consensus	673		99.61
KOG0649|consensus	325		99.61
KOG0322|consensus	323		99.61
KOG1538|consensus	1081		99.6
KOG1240|consensus	1431		99.59
KOG2919|consensus	406		99.59
KOG0644|consensus	1113		99.59
KOG1334|consensus	559		99.57
KOG1517|consensus	1387		99.57
KOG1587|consensus	555		99.56
KOG1034|consensus	385		99.55
KOG0650|consensus	733		99.55
KOG0290|consensus	364		99.53
KOG1310|consensus	758		99.53
KOG0290|consensus	364		99.53
KOG1523|consensus	361		99.51
KOG4227|consensus	609		99.5
KOG0644|consensus	1113		99.47
KOG1009|consensus	434		99.46
KOG1009|consensus	434		99.45
KOG2110|consensus	391		99.45
KOG1272|consensus	545		99.44
KOG1963|consensus	792		99.41
KOG0642|consensus	577		99.41
KOG0322|consensus	323		99.41
KOG2321|consensus	703		99.41
KOG1587|consensus	555		99.37
KOG0771|consensus	398		99.37
KOG1310|consensus	758		99.37
PRK11028	330	6-phosphogluconolactonase; Provisional	99.37
KOG1524|consensus	737		99.36
KOG2111|consensus	346		99.36
PRK11028	330	6-phosphogluconolactonase; Provisional	99.33
KOG1963|consensus	792		99.33
PRK01742	429	tolB translocation protein TolB; Provisional	99.32
KOG1272|consensus	545		99.31
KOG2110|consensus	391		99.31
KOG0771|consensus	398		99.31
KOG2394|consensus	636		99.29
KOG0974|consensus	967		99.28
KOG1334|consensus	559		99.27
PRK01742	429	tolB translocation protein TolB; Provisional	99.27
KOG1523|consensus	361		99.27
KOG3881|consensus	412		99.26
KOG2394|consensus	636		99.24
KOG3881|consensus	412		99.22
KOG1409|consensus	404		99.21
KOG4227|consensus	609		99.18
KOG1240|consensus	1431		99.17
PRK03629	429	tolB translocation protein TolB; Provisional	99.14
KOG4547|consensus	541		99.13
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	99.13
KOG0974|consensus	967		99.12
PRK05137	435	tolB translocation protein TolB; Provisional	99.08
KOG0309|consensus	1081		99.07
PRK04922	433	tolB translocation protein TolB; Provisional	99.06
KOG2111|consensus	346		99.06
KOG1064|consensus	2439		99.05
KOG4497|consensus	447		99.04
KOG2321|consensus	703		99.02
KOG2139|consensus	445		99.01
PRK02889	427	tolB translocation protein TolB; Provisional	99.0
PRK05137	435	tolB translocation protein TolB; Provisional	98.99
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	98.98
KOG0280|consensus	339		98.97
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	98.96
KOG1064|consensus	2439		98.95
PRK04922	433	tolB translocation protein TolB; Provisional	98.95
PRK03629	429	tolB translocation protein TolB; Provisional	98.93
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	98.87
PRK02889	427	tolB translocation protein TolB; Provisional	98.86
KOG4497|consensus	447		98.86
KOG4547|consensus	541		98.84
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	98.83
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	98.79
KOG4190|consensus	1034		98.79
KOG1354|consensus	433		98.78
KOG1354|consensus	433		98.77
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	98.77
KOG2139|consensus	445		98.76
KOG2315|consensus	566		98.76
PRK00178	430	tolB translocation protein TolB; Provisional	98.74
KOG0280|consensus	339		98.74
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	98.71
KOG3914|consensus	390		98.69
KOG0309|consensus	1081		98.68
PRK00178	430	tolB translocation protein TolB; Provisional	98.66
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	98.65
PRK04792	448	tolB translocation protein TolB; Provisional	98.63
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	98.62
KOG1409|consensus	404		98.6
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	98.58
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	98.56
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	98.53
KOG3914|consensus	390		98.52
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	98.52
KOG2315|consensus	566		98.52
PRK01029	428	tolB translocation protein TolB; Provisional	98.52
PRK04792	448	tolB translocation protein TolB; Provisional	98.47
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	98.46
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	98.46
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	98.43
KOG4190|consensus	1034		98.43
KOG4714|consensus	319		98.42
KOG4532|consensus	344		98.41
KOG2695|consensus	425		98.4
KOG4714|consensus	319		98.38
KOG4532|consensus	344		98.36
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	98.34
KOG2041|consensus	1189		98.34
KOG1912|consensus	1062		98.31
KOG2314|consensus	698		98.31
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	98.29
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	98.29
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	98.27
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	98.23
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	98.21
KOG2695|consensus	425		98.18
KOG1275|consensus	1118		98.18
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	98.15
PRK01029	428	tolB translocation protein TolB; Provisional	98.13
KOG1912|consensus	1062		98.11
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	98.1
COG4946	668	Uncharacterized protein related to the periplasmic	98.1
KOG2066|consensus	846		98.09
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	98.08
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	98.06
KOG2041|consensus	1189		98.04
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	98.01
KOG1645|consensus	463		98.01
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	98.0
COG4946	668	Uncharacterized protein related to the periplasmic	97.99
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	97.96
PRK04043	419	tolB translocation protein TolB; Provisional	97.92
KOG2066|consensus	846		97.87
KOG0882|consensus	558		97.85
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	97.81
PF04053	443	Coatomer_WDAD: Coatomer WD associated region ; Int	97.81
KOG0882|consensus	558		97.74
KOG2314|consensus	698		97.7
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	97.63
KOG4649|consensus	354		97.63
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	97.61
cd00216	488	PQQ_DH Dehydrogenases with pyrrolo-quinoline quino	97.6
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	97.57
PRK04043	419	tolB translocation protein TolB; Provisional	97.56
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	97.5
KOG2114|consensus	933		97.47
KOG1275|consensus	1118		97.44
KOG1920|consensus	1265		97.44
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	97.41
KOG1832|consensus	1516		97.39
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	97.37
KOG1920|consensus	1265		97.31
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	97.29
KOG1645|consensus	463		97.27
PF03178	321	CPSF_A: CPSF A subunit region; InterPro: IPR004871	97.22
KOG2114|consensus	933		97.19
PF04841	410	Vps16_N: Vps16, N-terminal region; InterPro: IPR00	97.1
KOG1008|consensus	783		97.1
KOG4649|consensus	354		97.03
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	97.0
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	96.95
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	96.9
KOG3621|consensus	726		96.88
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	96.88
KOG3621|consensus	726		96.81
KOG1832|consensus	1516		96.74
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	96.69
KOG3617|consensus	1416		96.59
PF04053	443	Coatomer_WDAD: Coatomer WD associated region ; Int	96.57
PF00780	275	CNH: CNH domain; InterPro: IPR001180 Based on sequ	96.56
KOG3617|consensus	1416		96.53
KOG1008|consensus	783		96.34
KOG2395|consensus	644		96.32
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	96.21
PF04841	410	Vps16_N: Vps16, N-terminal region; InterPro: IPR00	96.18
PRK02888	635	nitrous-oxide reductase; Validated	96.14
cd00216	488	PQQ_DH Dehydrogenases with pyrrolo-quinoline quino	96.0
KOG2395|consensus	644		95.65
PRK02888	635	nitrous-oxide reductase; Validated	95.56
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	95.36
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	95.28
KOG4640|consensus	665		95.23
KOG4640|consensus	665		95.21
KOG2444|consensus	238		95.21
PF03178	321	CPSF_A: CPSF A subunit region; InterPro: IPR004871	95.18
KOG2444|consensus	238		94.96
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	94.74
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	94.74
KOG2079|consensus	1206		94.68
COG3391	381	Uncharacterized conserved protein [Function unknow	94.68
TIGR03075	527	PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan	94.6
PF02897	414	Peptidase_S9_N: Prolyl oligopeptidase, N-terminal	94.5
PF14727	418	PHTB1_N: PTHB1 N-terminus	94.25
PRK13616	591	lipoprotein LpqB; Provisional	94.22
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	93.95
KOG4499|consensus	310		93.3
PF12234	631	Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0	92.91
PF14870	302	PSII_BNR: Photosynthesis system II assembly factor	92.27
KOG4499|consensus	310		92.03
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	91.98
PF10168	717	Nup88: Nuclear pore component; InterPro: IPR019321	91.88
PF15390	671	DUF4613: Domain of unknown function (DUF4613)	91.8
PLN00033	398	photosystem II stability/assembly factor; Provisio	91.75
TIGR03074	764	PQQ_membr_DH membrane-bound PQQ-dependent dehydrog	91.54
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	91.47
PF00780	275	CNH: CNH domain; InterPro: IPR001180 Based on sequ	91.35
PRK13616	591	lipoprotein LpqB; Provisional	91.31
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	90.7
PHA02713	557	hypothetical protein; Provisional	90.66
COG3391	381	Uncharacterized conserved protein [Function unknow	90.56
KOG1897|consensus	1096		90.48
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	90.33
PLN00033	398	photosystem II stability/assembly factor; Provisio	90.25
PF07995	331	GSDH: Glucose / Sorbosone dehydrogenase; InterPro:	90.23
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	90.2
KOG4441|consensus	571		90.18
PHA02713	557	hypothetical protein; Provisional	90.16
KOG2079|consensus	1206		90.13
COG3204	316	Uncharacterized protein conserved in bacteria [Fun	89.86
KOG2280|consensus	829		89.46
PF12234	631	Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0	89.25
COG1520	370	FOG: WD40-like repeat [Function unknown]	89.14
COG3490	366	Uncharacterized protein conserved in bacteria [Fun	89.09
PF02897	414	Peptidase_S9_N: Prolyl oligopeptidase, N-terminal	89.03
KOG1916|consensus	1283		87.88
KOG3630|consensus	1405		87.63
KOG1916|consensus	1283		87.36
KOG1897|consensus	1096		87.35
TIGR03075	527	PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan	87.24
PF07569	219	Hira: TUP1-like enhancer of split; InterPro: IPR01	87.05
KOG4441|consensus	571		86.46
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	86.43
TIGR02604	367	Piru_Ver_Nterm putative membrane-bound dehydrogena	86.29
KOG3630|consensus	1405		86.09
KOG2247|consensus	615		86.09
PRK13684	334	Ycf48-like protein; Provisional	86.03
TIGR03074	764	PQQ_membr_DH membrane-bound PQQ-dependent dehydrog	85.95
PHA03098	534	kelch-like protein; Provisional	85.88
KOG2280|consensus	829		85.6
KOG1898|consensus	1205		85.17
PF08728	717	CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans	84.41
COG5167	776	VID27 Protein involved in vacuole import and degra	84.37
PF08728	717	CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans	84.11
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	83.98
PF08801	422	Nucleoporin_N: Nup133 N terminal like; InterPro: I	83.49
PF10168	717	Nup88: Nuclear pore component; InterPro: IPR019321	83.16
COG4590	733	ABC-type uncharacterized transport system, permeas	83.1
COG5167	776	VID27 Protein involved in vacuole import and degra	82.75
PF10647	253	Gmad1: Lipoprotein LpqB beta-propeller domain; Int	81.97
TIGR02604	367	Piru_Ver_Nterm putative membrane-bound dehydrogena	81.89
PF14870	302	PSII_BNR: Photosynthesis system II assembly factor	81.57
PF14781	136	BBS2_N: Ciliary BBSome complex subunit 2, N-termin	81.54
PHA02790	480	Kelch-like protein; Provisional	80.35

>KOG0301|consensus

Probab=100.00  E-value=3.3e-78  Score=616.18  Aligned_cols=433  Identities=32%  Similarity=0.543  Sum_probs=363.3

Q ss_pred             CcEEEEEeccCcccEEEEEEcCCCcEEEEECCCcEEEEcCCC-------------------CCCC-CCCCEEEEEECCCe
Q psy7057           1 MYKLSTALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPND-------------------LSPG-AKVNTLLSASWDMT   60 (557)
Q Consensus         1 ~~kl~~~l~gH~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~-------------------~~~~-~~~~~l~sgs~Dg~   60 (557)
                      +|++.+.|.||..+|+.+++.+...++++|+||++++|+-..                   .++. .++..+++|+.|.+
T Consensus         3 ~Y~ls~~l~gH~~DVr~v~~~~~~~i~s~sRd~t~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~~   82 (745)
T KOG0301|consen    3 QYKLSHELEGHKSDVRAVAVTDGVCIISGSRDGTVKVWAKKGKQYLETHAFEGPKGFIANSICYAESDKGRLVVGGMDTT   82 (745)
T ss_pred             cceeEEEeccCccchheeEecCCeEEeecCCCCceeeeeccCcccccceecccCcceeeccceeccccCcceEeecccce
Confidence            699999999999999999998887899999999999998744                   1111 34556999999999


Q ss_pred             EEEEECCCCeEEEEEcccCCcEEEEEEcCCCEEEEEECCCeEEEEeCCCcEEEEEeCCCCCEEEEEEeCCCeEEEEECCC
Q psy7057          61 AKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDA  140 (557)
Q Consensus        61 i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg  140 (557)
                      +.+|.+.+..+..+|.+|+..|+|+....++.++|||+|.++++| ..+++...+.+|...|+++...|++.++|||.|+
T Consensus        83 i~v~~~~~~~P~~~LkgH~snVC~ls~~~~~~~iSgSWD~TakvW-~~~~l~~~l~gH~asVWAv~~l~e~~~vTgsaDK  161 (745)
T KOG0301|consen   83 IIVFKLSQAEPLYTLKGHKSNVCSLSIGEDGTLISGSWDSTAKVW-RIGELVYSLQGHTASVWAVASLPENTYVTGSADK  161 (745)
T ss_pred             EEEEecCCCCchhhhhccccceeeeecCCcCceEecccccceEEe-cchhhhcccCCcchheeeeeecCCCcEEeccCcc
Confidence            999999999999999999999999998888899999999999999 6778888899999999999999999999999999


Q ss_pred             eEEEEECCCCeEEEEEeCCCCcEEEEEE-cCCEEEEEeCCCeEEEEECCC-C-ceEeeCCccEEEEEEcCC-CcEEEEEc
Q psy7057         141 SIRVWDSTTGKCVHTMYGHPNFIYSVAA-HGDLITSGGEDQCVCVYQNKA-Q-NSFMIPAMSVWAVAILPN-SDIVTGSS  216 (557)
Q Consensus       141 ~I~vwd~~~~~~~~~~~~h~~~V~~l~~-~~~~l~s~s~Dg~I~iwd~~~-~-~~~~~~~~~v~~v~~~p~-g~l~sg~~  216 (557)
                      +|++|.  .++++++|.+|.+.|+.+++ ++..|+||++||.|+.|++.. + .++.+|...+++++..++ +.++++++
T Consensus       162 tIklWk--~~~~l~tf~gHtD~VRgL~vl~~~~flScsNDg~Ir~w~~~ge~l~~~~ghtn~vYsis~~~~~~~Ivs~gE  239 (745)
T KOG0301|consen  162 TIKLWK--GGTLLKTFSGHTDCVRGLAVLDDSHFLSCSNDGSIRLWDLDGEVLLEMHGHTNFVYSISMALSDGLIVSTGE  239 (745)
T ss_pred             eeeecc--CCchhhhhccchhheeeeEEecCCCeEeecCCceEEEEeccCceeeeeeccceEEEEEEecCCCCeEEEecC
Confidence            999998  68999999999999999999 676899999999999999743 3 788899999999995554 45999999


Q ss_pred             CCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCChhhHHHHHHHHHHHHHHHhhhhh
Q psy7057         217 DGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANE  296 (557)
Q Consensus       217 Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (557)
                      |+++|||+.....+  ...+  ...++++..+.....  +++||+||.||||+.++.|.+++++.++++.++...-....
T Consensus       240 DrtlriW~~~e~~q--~I~l--PttsiWsa~~L~NgD--Ivvg~SDG~VrVfT~~k~R~As~evl~afd~~v~s~~~~kt  313 (745)
T KOG0301|consen  240 DRTLRIWKKDECVQ--VITL--PTTSIWSAKVLLNGD--IVVGGSDGRVRVFTVDKDRKASDEVLKAFDAEVVSQISSKT  313 (745)
T ss_pred             CceEEEeecCceEE--EEec--CccceEEEEEeeCCC--EEEeccCceEEEEEecccccCCHHHHHHHHHHHHhhhhhhh
Confidence            99999999873222  1111  222455555444433  58999999999999999999999988888888844444445


Q ss_pred             cccCCeeccCCCCcccccCCCccCccEEEEeeCCeEEEEEEecCCCceeEeeEEecCCCCccccCCeeEecceeeeeEEE
Q psy7057         297 QEIGGVKVSDLPGKEVLYEPGKADGDVKMVREGSTVVAYSWSEASREWNKLGDVMGSAGGTQESSGKVLYQGKEYDFVFS  376 (557)
Q Consensus       297 ~~~~~~~~~~l~~~~~~~~~G~~~~~~~~~~~g~~~~~~~w~~~~~~W~~~g~v~~~~~~~~~~~~~~~~~g~~~d~v~~  376 (557)
                      ++.+.++..++|+.+.+..||+++|+.++.|+|+.+++|+|+..+..|  +++|+|...+.+.                 
T Consensus       314 ~~~g~v~~~~lPg~e~L~spGt~dGq~~~Vr~~~~v~ayqws~~e~r~--ikdvig~~~~~~~-----------------  374 (745)
T KOG0301|consen  314 EEVGGVKKDDLPGLEILKSPGTRDGQTKVVRDGENVEAYQWSNGEWRW--IKDVIGEVVAAQG-----------------  374 (745)
T ss_pred             hhhCccccccCCchhhhcCCCCCCCcEEEEEcCCcceeEEeeccccee--eccccccccccCC-----------------
Confidence            677888899999999999999999999999999999999999755544  4466654322211                 


Q ss_pred             EecCCCCCcccCCCccCCChHHHHHHHHHHcCCChHHHHHHHHHHHhcCCCCCCCCccceeeeeeeccCCCCCCCCCccC
Q psy7057         377 VDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHLSQMFLEQVANFIMTNSKSKQGPTEYDFVFSVDIEEGKPPLKLPYNVS  456 (557)
Q Consensus       377 v~~~~g~~~~~l~~n~~~~~~~~a~~~~~~~~l~~~~~~~v~~~i~~~~~~~~~g~~yd~vf~vd~~~g~p~~klp~n~~  456 (557)
                                                                    .+.|..|+||||||||||||+||+||+|||||++
T Consensus       375 ----------------------------------------------~s~K~l~EGKeYDyvF~VDi~dGep~~kLPyN~s  408 (745)
T KOG0301|consen  375 ----------------------------------------------NSGKVLHEGKEYDYVFDVDIGDGEPPYKLPYNVS  408 (745)
T ss_pred             ----------------------------------------------CCcceeecccccceEEEEEccCCCCceecCcCCC
Confidence                                                          2335578999999999999999999999999999


Q ss_pred             CCcccccccccccCCCceecccCCCCCcccccccCCChHHHHHhhhhcCCCChHHHHHHHHHHHhcccCCCCCCcccCCC
Q psy7057         457 EDPWHAAQAFIHTHHLTSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHLSQMFLEQVANFIMTNSKSKQGPTVTQTPP  536 (557)
Q Consensus       457 ~~p~~~a~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v~~fi~~n~~~~~~~~~~~~~~  536 (557)
                      ||||+||+|||++                                   |+||++|+||||+||.|||.+..   ...  +
T Consensus       409 dnPy~AA~~FL~k-----------------------------------~~Lp~sy~dqvv~FI~kNt~g~~---l~~--~  448 (745)
T KOG0301|consen  409 DNPYQAAQKFLEK-----------------------------------NQLPVSYRDQVVKFILKNTDGLS---LFA--A  448 (745)
T ss_pred             CCHHHHHHHHHHH-----------------------------------ccCCHHHHHHHHHHHHHhccccc---ccc--c
Confidence            9999988876665                                   69999999999999999996432   222  2


Q ss_pred             CCCCcCCCCCc
Q psy7057         537 SGEYCDPFTGK  547 (557)
Q Consensus       537 ~~~~~dp~~~~  547 (557)
                      .++|.|||||+
T Consensus       449 ~~~~~dpftg~  459 (745)
T KOG0301|consen  449 NPSYEDPFTGG  459 (745)
T ss_pred             CCcccCccCCC
Confidence            33499999998

>KOG0301|consensus

Probab=100.00  E-value=3.2e-48  Score=396.61  Aligned_cols=379  Identities=39%  Similarity=0.711  Sum_probs=295.8

Q ss_pred             EEeccCcccEEE-EEEcCC--CcEEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEEC
Q psy7057           6 TALYGHSMDVRS-LSVTPD--GCILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCL   66 (557)
Q Consensus         6 ~~l~gH~~~V~~-l~~spd--g~l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~   66 (557)
                      +.+.+|.+-|.+ +++.+.  ++|++|+.|.+|.+|....                ++...+ ..++|||||.++++|..
T Consensus        51 ~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~~i~v~~~~~~~P~~~LkgH~snVC~ls~~~~-~~~iSgSWD~TakvW~~  129 (745)
T KOG0301|consen   51 HAFEGPKGFIANSICYAESDKGRLVVGGMDTTIIVFKLSQAEPLYTLKGHKSNVCSLSIGED-GTLISGSWDSTAKVWRI  129 (745)
T ss_pred             eecccCcceeeccceeccccCcceEeecccceEEEEecCCCCchhhhhccccceeeeecCCc-CceEecccccceEEecc
Confidence            567888888888 888763  3499999999999999876                233333 34899999999999975


Q ss_pred             CCCeEEEEEcccCCcEEEEEEcCCCEEEEEECCCeEEEEeCCCcEEEEEeCCCCCEEEEEEeCCCeEEEEECCCeEEEEE
Q psy7057          67 ESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWD  146 (557)
Q Consensus        67 ~~~~~~~~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd  146 (557)
                        +++...+.+|...|++++..|++.++|||.|++|++| ..++.++++.+|.+.|+.+++.+++.|+||++||.|++|+
T Consensus       130 --~~l~~~l~gH~asVWAv~~l~e~~~vTgsaDKtIklW-k~~~~l~tf~gHtD~VRgL~vl~~~~flScsNDg~Ir~w~  206 (745)
T KOG0301|consen  130 --GELVYSLQGHTASVWAVASLPENTYVTGSADKTIKLW-KGGTLLKTFSGHTDCVRGLAVLDDSHFLSCSNDGSIRLWD  206 (745)
T ss_pred             --hhhhcccCCcchheeeeeecCCCcEEeccCcceeeec-cCCchhhhhccchhheeeeEEecCCCeEeecCCceEEEEe
Confidence              4677789999999999999999999999999999999 5588999999999999999999999999999999999999


Q ss_pred             CCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC-ceEeeCCccEEEEEEcCCCcEEEEEcCCcEEEE
Q psy7057         147 STTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ-NSFMIPAMSVWAVAILPNSDIVTGSSDGIVRVF  223 (557)
Q Consensus       147 ~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~-~~~~~~~~~v~~v~~~p~g~l~sg~~Dg~I~iw  223 (557)
                      + +|+++.++.+|+..|++++.  ++..++|+++|++++||+...+ +.+..+...||++++.++|++++||+||.||||
T Consensus       207 ~-~ge~l~~~~ghtn~vYsis~~~~~~~Ivs~gEDrtlriW~~~e~~q~I~lPttsiWsa~~L~NgDIvvg~SDG~VrVf  285 (745)
T KOG0301|consen  207 L-DGEVLLEMHGHTNFVYSISMALSDGLIVSTGEDRTLRIWKKDECVQVITLPTTSIWSAKVLLNGDIVVGGSDGRVRVF  285 (745)
T ss_pred             c-cCceeeeeeccceEEEEEEecCCCCeEEEecCCceEEEeecCceEEEEecCccceEEEEEeeCCCEEEeccCceEEEE
Confidence            7 89999999999999999995  6678999999999999998888 888889999999999999999999999999999


Q ss_pred             ecCCCCcchhHHHhcccceeEEEeccCCCcee-----------EEE--EeCCCcEEEEecCCChhhHHHHHHHHHHHHHH
Q psy7057         224 SANPDRQAEDAVQAQYAEEVKKLKSANEQEIG-----------GVK--VSDDGIVRVFSANPDRQAEDAVQAQYAEEVKK  290 (557)
Q Consensus       224 d~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~-----------~vs--~s~DG~IrvW~~~~~~~~~~~~~~~~~~~~~~  290 (557)
                      ..+..+.+.......+...+.+-......+..           .+.  |..||..++-..                    
T Consensus       286 T~~k~R~As~evl~afd~~v~s~~~~kt~~~g~v~~~~lPg~e~L~spGt~dGq~~~Vr~--------------------  345 (745)
T KOG0301|consen  286 TVDKDRKASDEVLKAFDAEVVSQISSKTEEVGGVKKDDLPGLEILKSPGTRDGQTKVVRD--------------------  345 (745)
T ss_pred             EecccccCCHHHHHHHHHHHHhhhhhhhhhhCccccccCCchhhhcCCCCCCCcEEEEEc--------------------
Confidence            99988887777766665444111000000000           011  222222222111                    


Q ss_pred             HhhhhhcccCCeeccCCCCcccccCCCccCccEEEEeeCCeEEEEEEecCCCceeEeeEEecCCCCccccCCeeEeccee
Q psy7057         291 LKSANEQEIGGVKVSDLPGKEVLYEPGKADGDVKMVREGSTVVAYSWSEASREWNKLGDVMGSAGGTQESSGKVLYQGKE  370 (557)
Q Consensus       291 ~~~~~~~~~~~~~~~~l~~~~~~~~~G~~~~~~~~~~~g~~~~~~~w~~~~~~W~~~g~v~~~~~~~~~~~~~~~~~g~~  370 (557)
                                                |. .....-|-+++.    .|-..     .+|++++...+..    |+++|||+
T Consensus       346 --------------------------~~-~v~ayqws~~e~----r~ikd-----vig~~~~~~~~s~----K~l~EGKe  385 (745)
T KOG0301|consen  346 --------------------------GE-NVEAYQWSNGEW----RWIKD-----VIGEVVAAQGNSG----KVLHEGKE  385 (745)
T ss_pred             --------------------------CC-cceeEEeecccc----eeecc-----ccccccccCCCCc----ceeecccc
Confidence                                      11 111111222211    01100     2455555544443    67899999


Q ss_pred             eeeEEEEecCCCCCcccCCCccCCChHHHHHHHHHHcCCChHHHHHHHHHHHhcCCCCCCCCccceeeeeeeccCCCCCC
Q psy7057         371 YDFVFSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHLSQMFLEQVANFIMTNSKSKQGPTEYDFVFSVDIEEGKPPLK  450 (557)
Q Consensus       371 ~d~v~~v~~~~g~~~~~l~~n~~~~~~~~a~~~~~~~~l~~~~~~~v~~~i~~~~~~~~~g~~yd~vf~vd~~~g~p~~k  450 (557)
                      |||||+||++||+|++|||||++||||.+|++|+++|+||.+|++|||+||.+|+.+.-.+.            ..|+  
T Consensus       386 YDyvF~VDi~dGep~~kLPyN~sdnPy~AA~~FL~k~~Lp~sy~dqvv~FI~kNt~g~~l~~------------~~~~--  451 (745)
T KOG0301|consen  386 YDYVFDVDIGDGEPPYKLPYNVSDNPYQAAQKFLEKNQLPVSYRDQVVKFILKNTDGLSLFA------------ANPS--  451 (745)
T ss_pred             cceEEEEEccCCCCceecCcCCCCCHHHHHHHHHHHccCCHHHHHHHHHHHHHhcccccccc------------cCCc--
Confidence            99999999999999999999999999999999999999999999999999999997542221            1121  


Q ss_pred             CCCccCCCcccccccccc
Q psy7057         451 LPYNVSEDPWHAAQAFIH  468 (557)
Q Consensus       451 lp~n~~~~p~~~a~~f~~  468 (557)
                           -+||++.+.||++
T Consensus       452 -----~~dpftg~~ryvp  464 (745)
T KOG0301|consen  452 -----YEDPFTGGGRYVP  464 (745)
T ss_pred             -----ccCccCCCccccc
Confidence                 4889999988775

>KOG0271|consensus

Probab=100.00  E-value=3.9e-41  Score=323.37  Aligned_cols=269  Identities=20%  Similarity=0.316  Sum_probs=241.4

Q ss_pred             cEEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEE
Q psy7057           2 YKLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLW   64 (557)
Q Consensus         2 ~kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iw   64 (557)
                      .++...+.||.++|.|+.|+|+|. |+||+.|.++|+||+.+                ++++|++..|++|+.||+|++|
T Consensus       105 trCssS~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lw  184 (480)
T KOG0271|consen  105 TRCSSSIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLW  184 (480)
T ss_pred             ceeccccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCCCCcceeecCCccEEEEEEECCCcchhhccccCCeEEEe
Confidence            356678899999999999999998 99999999999999987                7899999999999999999999


Q ss_pred             ECCCCeEE-EEEcccCCcEEEEEEcC-----C-CEEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCeEEEE
Q psy7057          65 CLESQQCK-LTIRQHEMAVWGVIQLA-----N-GIIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTDFVSC  136 (557)
Q Consensus        65 d~~~~~~~-~~l~~h~~~V~~l~~~~-----~-~~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~lvs~  136 (557)
                      |.++++++ ..|.+|+..|++++|-|     . ++|++++.||.++||| ..+.++..+.+|+.+|+|+.|-.++.+++|
T Consensus       185 dpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsgHT~~VTCvrwGG~gliySg  264 (480)
T KOG0271|consen  185 DPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSGHTASVTCVRWGGEGLIYSG  264 (480)
T ss_pred             cCCCCCcccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEeccCccceEEEEEcCCceEEec
Confidence            99998755 67999999999999987     2 2899999999999999 566789999999999999999988989999


Q ss_pred             ECCCeEEEEECCCCeEEEEEeCCCCcEEEEEEc-------------CC-------------------------EEEEEeC
Q psy7057         137 SNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAH-------------GD-------------------------LITSGGE  178 (557)
Q Consensus       137 s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~~-------------~~-------------------------~l~s~s~  178 (557)
                      |.|++|++|+...|++.+++++|...|..++.+             ++                         .|++|+.
T Consensus       265 S~DrtIkvw~a~dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsD  344 (480)
T KOG0271|consen  265 SQDRTIKVWRALDGKLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSD  344 (480)
T ss_pred             CCCceEEEEEccchhHHHhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecC
Confidence            999999999999999999999999999888753             33                         4999999


Q ss_pred             CCeEEEEECCCC----ceEeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCc
Q psy7057         179 DQCVCVYQNKAQ----NSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQE  253 (557)
Q Consensus       179 Dg~I~iwd~~~~----~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~  253 (557)
                      |.++.+|+....    ..+.+|...|+.+.|+||++ +++++-|.+|++|+-++++.+  ....+|...+..+.+..+.+
T Consensus       345 d~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~tGk~l--asfRGHv~~VYqvawsaDsR  422 (480)
T KOG0271|consen  345 DFTLFLWNPFKSKKPITRMTGHQALVNHVSFSPDGRYIASASFDKSVKLWDGRTGKFL--ASFRGHVAAVYQVAWSADSR  422 (480)
T ss_pred             CceEEEecccccccchhhhhchhhheeeEEECCCccEEEEeecccceeeeeCCCcchh--hhhhhccceeEEEEeccCcc
Confidence            999999995433    57889999999999999999 899999999999999998865  45567888888888877765


Q ss_pred             eeEEEEeCCCcEEEEecCCC
Q psy7057         254 IGGVKVSDDGIVRVFSANPD  273 (557)
Q Consensus       254 ~~~vs~s~DG~IrvW~~~~~  273 (557)
                       .+++||.|.+++||++.+.
T Consensus       423 -LlVS~SkDsTLKvw~V~tk  441 (480)
T KOG0271|consen  423 -LLVSGSKDSTLKVWDVRTK  441 (480)
T ss_pred             -EEEEcCCCceEEEEEeeee
Confidence             5899999999999998754

>KOG0271|consensus

Probab=100.00  E-value=6.1e-38  Score=301.39  Aligned_cols=262  Identities=27%  Similarity=0.397  Sum_probs=235.5

Q ss_pred             EEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------------CCCCCCCCEEEEEECCCeE
Q psy7057           5 STALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------------LSPGAKVNTLLSASWDMTA   61 (557)
Q Consensus         5 ~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------------~~~~~~~~~l~sgs~Dg~i   61 (557)
                      ..+++||...|.|++|+|||+ |++|+.||+|++||..+                      +...+...+|+++|.||++
T Consensus       150 ~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~v  229 (480)
T KOG0271|consen  150 LFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSV  229 (480)
T ss_pred             ceeecCCccEEEEEEECCCcchhhccccCCeEEEecCCCCCcccccccCcccceeEEeecccccCCCccceecccCCCCE
Confidence            467899999999999999999 99999999999999776                      3344567799999999999


Q ss_pred             EEEECCCCeEEEEEcccCCcEEEEEEcCCCEEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeC-----------
Q psy7057          62 KLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLN-----------  129 (557)
Q Consensus        62 ~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~-----------  129 (557)
                      +|||+..+.++..+.+|+.+|+|+.|-.+|+|.+||.|++|++|+ .+|.+.+.+++|...|+.|+.+-           
T Consensus       230 rIWd~~~~~~~~~lsgHT~~VTCvrwGG~gliySgS~DrtIkvw~a~dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~~  309 (480)
T KOG0271|consen  230 RIWDTKLGTCVRTLSGHTASVTCVRWGGEGLIYSGSQDRTIKVWRALDGKLCRELKGHAHWVNHLALSTDYVLRTGAFDH  309 (480)
T ss_pred             EEEEccCceEEEEeccCccceEEEEEcCCceEEecCCCceEEEEEccchhHHHhhcccchheeeeeccchhhhhcccccc
Confidence            999999999999999999999999999999999999999999999 78899999999999999999871           


Q ss_pred             --C------------------------CeEEEEECCCeEEEEECCC-CeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCC
Q psy7057         130 --D------------------------TDFVSCSNDASIRVWDSTT-GKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQ  180 (557)
Q Consensus       130 --~------------------------~~lvs~s~Dg~I~vwd~~~-~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg  180 (557)
                        .                        .++++||.|.++.+|+... .+++..+.+|...|..+.|  ++++++++|-|.
T Consensus       310 t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSPd~r~IASaSFDk  389 (480)
T KOG0271|consen  310 TGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKKPITRMTGHQALVNHVSFSPDGRYIASASFDK  389 (480)
T ss_pred             ccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecccccccchhhhhchhhheeeEEECCCccEEEEeeccc
Confidence              0                        1388999999999999754 4588899999999999999  778999999999


Q ss_pred             eEEEEECCCC---ceEeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeE
Q psy7057         181 CVCVYQNKAQ---NSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGG  256 (557)
Q Consensus       181 ~I~iwd~~~~---~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~  256 (557)
                      .|++|+.++.   ..+++|-..|+.++|+.|.+ +++|+.|.++++|++++.+..  ..+.+|..++..+.+.++.. .+
T Consensus       390 SVkLW~g~tGk~lasfRGHv~~VYqvawsaDsRLlVS~SkDsTLKvw~V~tkKl~--~DLpGh~DEVf~vDwspDG~-rV  466 (480)
T KOG0271|consen  390 SVKLWDGRTGKFLASFRGHVAAVYQVAWSADSRLLVSGSKDSTLKVWDVRTKKLK--QDLPGHADEVFAVDWSPDGQ-RV  466 (480)
T ss_pred             ceeeeeCCCcchhhhhhhccceeEEEEeccCccEEEEcCCCceEEEEEeeeeeec--ccCCCCCceEEEEEecCCCc-ee
Confidence            9999998776   67788999999999999999 889999999999999987764  44567888999999988876 47


Q ss_pred             EEEeCCCcEEEEe
Q psy7057         257 VKVSDDGIVRVFS  269 (557)
Q Consensus       257 vs~s~DG~IrvW~  269 (557)
                      ++|+.|..+|+|.
T Consensus       467 ~sggkdkv~~lw~  479 (480)
T KOG0271|consen  467 ASGGKDKVLRLWR  479 (480)
T ss_pred             ecCCCceEEEeec
Confidence            8999999999995

>KOG0286|consensus

Probab=100.00  E-value=5.5e-36  Score=279.36  Aligned_cols=265  Identities=24%  Similarity=0.339  Sum_probs=235.9

Q ss_pred             cEEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEE
Q psy7057           2 YKLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLW   64 (557)
Q Consensus         2 ~kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iw   64 (557)
                      ++..++|+||.+.|.++.|++|.+ |+++|.||.+.|||..+                .+++|.++++++|+.|....||
T Consensus        45 ~~~rr~LkGH~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN~Csiy  124 (343)
T KOG0286|consen   45 MRTRRTLKGHLNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDNKCSIY  124 (343)
T ss_pred             eeeEEEecccccceeeeEecCCcCeEEeeccCCeEEEEEcccccceeEEecCceeEEEEEECCCCCeEEecCcCceeEEE
Confidence            567899999999999999999998 99999999999999876                6788999999999999999999


Q ss_pred             ECCCC------eEEEEEcccCCcEEEEEEcCCCEEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeC-CC-eEEE
Q psy7057          65 CLESQ------QCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLN-DT-DFVS  135 (557)
Q Consensus        65 d~~~~------~~~~~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~-~~-~lvs  135 (557)
                      ++.+.      +..+.+.+|+..+.|+.|.+++.|+|+|.|.++.+|| .++..+..+.+|.+.|.+++++| ++ .|++
T Consensus       125 ~ls~~d~~g~~~v~r~l~gHtgylScC~f~dD~~ilT~SGD~TCalWDie~g~~~~~f~GH~gDV~slsl~p~~~ntFvS  204 (343)
T KOG0286|consen  125 PLSTRDAEGNVRVSRELAGHTGYLSCCRFLDDNHILTGSGDMTCALWDIETGQQTQVFHGHTGDVMSLSLSPSDGNTFVS  204 (343)
T ss_pred             ecccccccccceeeeeecCccceeEEEEEcCCCceEecCCCceEEEEEcccceEEEEecCCcccEEEEecCCCCCCeEEe
Confidence            99865      3556799999999999999999999999999999999 67888999999999999999999 54 4999


Q ss_pred             EECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCCceEeeC-----CccEEEEEEcCC
Q psy7057         136 CSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQNSFMIP-----AMSVWAVAILPN  208 (557)
Q Consensus       136 ~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~~~~~~~-----~~~v~~v~~~p~  208 (557)
                      |+-|++.++||++.+.++++|.+|..-|.++.|  +|.-+++|++|++.|+||++..+++...     ..+|++++|+-.
T Consensus       205 g~cD~~aklWD~R~~~c~qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~S  284 (343)
T KOG0286|consen  205 GGCDKSAKLWDVRSGQCVQTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQELAVYSHDSIICGITSVAFSKS  284 (343)
T ss_pred             cccccceeeeeccCcceeEeecccccccceEEEccCCCeeeecCCCceeEEEeecCCcEEeeeccCcccCCceeEEEccc
Confidence            999999999999999999999999999999999  7789999999999999999886544332     347999999999


Q ss_pred             Cc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEe
Q psy7057         209 SD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFS  269 (557)
Q Consensus       209 g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~  269 (557)
                      |+ |++|..|.++.+||.-.++..  ..+.+|...|..+...++. ..+.+||.|.++|||.
T Consensus       285 GRlLfagy~d~~c~vWDtlk~e~v--g~L~GHeNRvScl~~s~DG-~av~TgSWDs~lriW~  343 (343)
T KOG0286|consen  285 GRLLFAGYDDFTCNVWDTLKGERV--GVLAGHENRVSCLGVSPDG-MAVATGSWDSTLRIWA  343 (343)
T ss_pred             ccEEEeeecCCceeEeeccccceE--EEeeccCCeeEEEEECCCC-cEEEecchhHheeecC
Confidence            99 778899999999997655443  3455788889988876654 4689999999999994

>KOG0279|consensus

Probab=100.00  E-value=5.7e-35  Score=271.17  Aligned_cols=269  Identities=24%  Similarity=0.331  Sum_probs=229.5

Q ss_pred             cEEEEEeccCcccEEEEEEcCCCc--EEEEECCCcEEEEcCCC---------------------CCCCCCCCEEEEEECC
Q psy7057           2 YKLSTALYGHSMDVRSLSVTPDGC--ILSASRDKSAKLWKPND---------------------LSPGAKVNTLLSASWD   58 (557)
Q Consensus         2 ~kl~~~l~gH~~~V~~l~~spdg~--l~sgs~Dg~V~iWd~~~---------------------~~~~~~~~~l~sgs~D   58 (557)
                      ..+..+|++|++.|+.++..+.+.  |+++++|.++.+|++..                     +..++++++.+++++|
T Consensus         5 l~l~~tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~swD   84 (315)
T KOG0279|consen    5 LVLRGTLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSASWD   84 (315)
T ss_pred             heeeeeecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccCccccCceeeeeeccceEecceEEccCCceEEecccc
Confidence            356788999999999999999865  88999999999999876                     5567789999999999


Q ss_pred             CeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcEEEEEeCC--CCCEEEEEEeCCC---e
Q psy7057          59 MTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFLKTLTGH--TDCVRGLAVLNDT---D  132 (557)
Q Consensus        59 g~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~~~l~~h--~~~V~~l~~~~~~---~  132 (557)
                      +++|+||+.+++..+.|.+|...|.+++|++++ .|++||.|++|++|+.-+.+..++..+  .+.|.|+.|+|+.   .
T Consensus        85 ~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g~ck~t~~~~~~~~WVscvrfsP~~~~p~  164 (315)
T KOG0279|consen   85 GTLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLGVCKYTIHEDSHREWVSCVRFSPNESNPI  164 (315)
T ss_pred             ceEEEEEecCCcEEEEEEecCCceEEEEecCCCceeecCCCcceeeeeeecccEEEEEecCCCcCcEEEEEEcCCCCCcE
Confidence            999999999999999999999999999999988 999999999999999888888888755  7899999999983   3


Q ss_pred             EEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCCceE--eeCCccEEEEEEcCC
Q psy7057         133 FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQNSF--MIPAMSVWAVAILPN  208 (557)
Q Consensus       133 lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~~~~--~~~~~~v~~v~~~p~  208 (557)
                      |+++|+|+++++||+++-+....+.+|+..++.+++  +|...++|+.||.+.+||+++.+.+  ..+...|.+++|+|+
T Consensus       165 Ivs~s~DktvKvWnl~~~~l~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~lysl~a~~~v~sl~fspn  244 (315)
T KOG0279|consen  165 IVSASWDKTVKVWNLRNCQLRTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGKNLYSLEAFDIVNSLCFSPN  244 (315)
T ss_pred             EEEccCCceEEEEccCCcchhhccccccccEEEEEECCCCCEEecCCCCceEEEEEccCCceeEeccCCCeEeeEEecCC
Confidence            779999999999999999999999999999999998  8899999999999999998877443  346678999999999


Q ss_pred             CcEEEEEcCCcEEEEecCCCCcchhHHHhcc-------cceeEEEeccCCCceeEEEEeCCCcEEEEecC
Q psy7057         209 SDIVTGSSDGIVRVFSANPDRQAEDAVQAQY-------AEEVKKLKSANEQEIGGVKVSDDGIVRVFSAN  271 (557)
Q Consensus       209 g~l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~-------~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~  271 (557)
                      ...+++..+..|+||++.+............       .....++.+..+ ...+++|-.|+.||+|.+.
T Consensus       245 rywL~~at~~sIkIwdl~~~~~v~~l~~d~~g~s~~~~~~~clslaws~d-G~tLf~g~td~~irv~qv~  313 (315)
T KOG0279|consen  245 RYWLCAATATSIKIWDLESKAVVEELKLDGIGPSSKAGDPICLSLAWSAD-GQTLFAGYTDNVIRVWQVA  313 (315)
T ss_pred             ceeEeeccCCceEEEeccchhhhhhccccccccccccCCcEEEEEEEcCC-CcEEEeeecCCcEEEEEee
Confidence            9866666777799999998766543332221       112333444443 4568999999999999864

>KOG0272|consensus

Probab=100.00  E-value=4.4e-36  Score=292.27  Aligned_cols=258  Identities=24%  Similarity=0.271  Sum_probs=231.6

Q ss_pred             ccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCC--CCEEEEEECCCeEEEEECCCC
Q psy7057           9 YGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAK--VNTLLSASWDMTAKLWCLESQ   69 (557)
Q Consensus         9 ~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~--~~~l~sgs~Dg~i~iwd~~~~   69 (557)
                      .|-+.+|..+.|++|+. |+|||.+|.+++|+..+                +.|+|.  +..++||+.||++++|++.+.
T Consensus       172 ~gd~rPis~~~fS~ds~~laT~swsG~~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e  251 (459)
T KOG0272|consen  172 VGDTRPISGCSFSRDSKHLATGSWSGLVKVWSVPQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQE  251 (459)
T ss_pred             ccCCCcceeeEeecCCCeEEEeecCCceeEeecCCcceeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCCC
Confidence            46678999999999998 99999999999999877                344444  668999999999999999998


Q ss_pred             eEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCeEE-EEECCCeEEEEE
Q psy7057          70 QCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTDFV-SCSNDASIRVWD  146 (557)
Q Consensus        70 ~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~lv-s~s~Dg~I~vwd  146 (557)
                      .++..+.+|...|..++|+|+| +|+|+|.|.+-++|| .++..+....||...|.+++|.++|.++ ||+.|..-||||
T Consensus       252 ~~l~~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWD  331 (459)
T KOG0272|consen  252 TPLQDLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSELLLQEGHSKGVFSIAFQPDGSLAATGGLDSLGRVWD  331 (459)
T ss_pred             cchhhhhcchhhheeeeecCCCceeeecccccchhhcccccchhhHhhcccccccceeEecCCCceeeccCccchhheee
Confidence            9999999999999999999999 999999999999999 4556677788999999999999999865 999999999999


Q ss_pred             CCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC---ceEeeCCccEEEEEEcCC-Cc-EEEEEcCCc
Q psy7057         147 STTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVAILPN-SD-IVTGSSDGI  219 (557)
Q Consensus       147 ~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p~-g~-l~sg~~Dg~  219 (557)
                      +++|+++..+.+|...|.+|+|  +|-.|+|||.|++++|||++..   .++..|..-|..|+|+|. |. |++++.|++
T Consensus       332 lRtgr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD~t  411 (459)
T KOG0272|consen  332 LRTGRCIMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSELYTIPAHSNLVSQVKYSPQEGYFLVTASYDNT  411 (459)
T ss_pred             cccCcEEEEecccccceeeEeECCCceEEeecCCCCcEEEeeecccccceecccccchhhheEecccCCeEEEEcccCcc
Confidence            9999999999999999999999  6668999999999999998755   677889999999999994 55 889999999


Q ss_pred             EEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEe
Q psy7057         220 VRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFS  269 (557)
Q Consensus       220 I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~  269 (557)
                      ++||...+..+.  ..+.+|.+.|.++...++.. .++|+|.|.++++|.
T Consensus       412 ~kiWs~~~~~~~--ksLaGHe~kV~s~Dis~d~~-~i~t~s~DRT~KLW~  458 (459)
T KOG0272|consen  412 VKIWSTRTWSPL--KSLAGHEGKVISLDISPDSQ-AIATSSFDRTIKLWR  458 (459)
T ss_pred             eeeecCCCcccc--hhhcCCccceEEEEeccCCc-eEEEeccCceeeecc
Confidence            999998877654  56678999999998877655 589999999999995

>PF09070 PFU: PFU (PLAA family ubiquitin binding); InterPro: IPR015155 The PFU (for PLAA family ubiquitin binding domain) is an ubiquitin binding domain with no homology to several known ubiquitin binding domains (e

Probab=100.00  E-value=1.3e-38  Score=264.05  Aligned_cols=110  Identities=51%  Similarity=0.973  Sum_probs=51.6

Q ss_pred             CCCccCccEEEEeeC-CeEEEEEEecCCCceeEeeEEecCCCCccccCCeeEecceeeeeEEEEecCCCCCcccCCCccC
Q psy7057         315 EPGKADGDVKMVREG-STVVAYSWSEASREWNKLGDVMGSAGGTQESSGKVLYQGKEYDFVFSVDIEEGKPPLKLPYNVS  393 (557)
Q Consensus       315 ~~G~~~~~~~~~~~g-~~~~~~~w~~~~~~W~~~g~v~~~~~~~~~~~~~~~~~g~~~d~v~~v~~~~g~~~~~l~~n~~  393 (557)
                      .||+++|+++++|++ +++++|+|+  .+.|+++|+|++......                                   
T Consensus         2 ~~G~keGq~~~vr~~~g~veay~Ws--~~~W~kiG~Vv~~~~~~~-----------------------------------   44 (116)
T PF09070_consen    2 QPGKKEGQVKMVRNGNGKVEAYQWS--EGKWEKIGEVVGGPGTGS-----------------------------------   44 (116)
T ss_dssp             -------------------------------------------TT-----------------------------------
T ss_pred             CCCCccceEEEEEcCCCCEEEEEec--CCceEEeEEEeCCCCCCc-----------------------------------
Confidence            479999999999999 999999999  899999999997532100                                   


Q ss_pred             CChHHHHHHHHHHcCCChHHHHHHHHHHHhcCCCCCCCCccceeeeeeeccCCCCCCCCCccCCCcccccccccccCCCc
Q psy7057         394 EDPWHAAQAFIHTHHLSQMFLEQVANFIMTNSKSKQGPTEYDFVFSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHLT  473 (557)
Q Consensus       394 ~~~~~~a~~~~~~~~l~~~~~~~v~~~i~~~~~~~~~g~~yd~vf~vd~~~g~p~~klp~n~~~~p~~~a~~f~~~~~~~  473 (557)
                                                   +..+..|+||+|||||||||+||.||||||||++||||+||++||      
T Consensus        45 -----------------------------~~~k~~~~Gk~YDyVf~Vdi~dg~~~lkLpyN~~dnP~~aAq~Fi------   89 (116)
T PF09070_consen   45 -----------------------------SGGKKYYEGKEYDYVFDVDIEDGGPPLKLPYNKGDNPYEAAQKFI------   89 (116)
T ss_dssp             -----------------------------SSSSEEETTEEESEEEEE--STTSS-EEEEE-TTS-HHHHHHHHH------
T ss_pred             -----------------------------ccccccccCccceEEEEEEecCCCcceeCCccCCCCHHHHHHHHH------
Confidence                                         123446899999999999999999999999888888877777655      


Q ss_pred             eecccCCCCCcccccccCCChHHHHHhhhhcCCCChHHHHHHHHHHHhcccC
Q psy7057         474 SVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHLSQMFLEQVANFIMTNSKS  525 (557)
Q Consensus       474 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v~~fi~~n~~~  525 (557)
                                                   ++|+||++|||||++||++||++
T Consensus        90 -----------------------------~~n~Lp~~yl~qI~~FI~~N~~~  112 (116)
T PF09070_consen   90 -----------------------------ERNNLPQSYLDQIANFIIQNTKG  112 (116)
T ss_dssp             -----------------------------HHHT--CCHHHHHHHHHHHHHST
T ss_pred             -----------------------------HHcCCCHHHHHHHHHHHHHcCCC
Confidence                                         55799999999999999999974

g., UIM, NZF, UBA, UEV, UBP, or CUE domains). The PFU domain appears to be unique to the PLAA family of proteins. A single member of this family of proteins exists in every eukaryotic species examined. Each of these homologues possesses identical domain structure: an N-terminal domain containing seven WD40 repeats, a central PFU domain, and a C-terminal PUL domain, which directly binds to Cdc48, a member of the AAA-ATPase family of molecular chaperone []. In addition to ubiquitin, the PFU domain of DOA1 has been shown to bind to the SH3 domain []. Secondary structure predictions of the PFU domain suggest the presence of an extensive length of beta-sheet, N-terminal to an alpha-helical region []. Some proteins known to contain a PFU domain include: Saccharomyces cerevisiae DOA1 (UFD3, ZZZ4), involved in the ubiquitin conjugation pathway. DOA1 participates in the regulation of the ubiquitin conjugation pathway involving CDC48 by hindering multiubiquitination of substrates at the CDC48 chaperone. Schizosaccharomyces pombe ubiquitin homeostasis protein Lub1, acts as a negative regulator of vacuole-dependent ubiquitin degradation. Mammalian phospholipase A-2-activating protein (PLA2P, PLAA), the homologue of DOA1. PLA2P plays an important role in the regulation of specific inflammatory disease processes. ; PDB: 2K8B_B 2K8A_A 2K8C_B 2K89_A 3L3F_X 3PST_A 3PSP_A.

>KOG0272|consensus

Probab=100.00  E-value=7.7e-36  Score=290.58  Aligned_cols=223  Identities=25%  Similarity=0.360  Sum_probs=210.9

Q ss_pred             cEEEEEeccCcccEEEEEEcCC--Cc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEE
Q psy7057           2 YKLSTALYGHSMDVRSLSVTPD--GC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAK   62 (557)
Q Consensus         2 ~kl~~~l~gH~~~V~~l~~spd--g~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~   62 (557)
                      ..+.++|.||.+.|.++.|+|.  +. |+||+.||++++|++.+                ++|+|+|.+|+|+|.|.+-+
T Consensus       207 ~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e~~l~~l~gH~~RVs~VafHPsG~~L~TasfD~tWR  286 (459)
T KOG0272|consen  207 CNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQETPLQDLEGHLARVSRVAFHPSGKFLGTASFDSTWR  286 (459)
T ss_pred             cceeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCCCcchhhhhcchhhheeeeecCCCceeeecccccchh
Confidence            3568899999999999999997  33 99999999999999887                78999999999999999999


Q ss_pred             EEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECC
Q psy7057          63 LWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSND  139 (557)
Q Consensus        63 iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~D  139 (557)
                      +||++++..+....||...|.+++|.++| +++||+.|..-+||| .+|.++..|.+|..+|.++.|+|+|. ++|||.|
T Consensus       287 lWD~~tk~ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtgr~im~L~gH~k~I~~V~fsPNGy~lATgs~D  366 (459)
T KOG0272|consen  287 LWDLETKSELLLQEGHSKGVFSIAFQPDGSLAATGGLDSLGRVWDLRTGRCIMFLAGHIKEILSVAFSPNGYHLATGSSD  366 (459)
T ss_pred             hcccccchhhHhhcccccccceeEecCCCceeeccCccchhheeecccCcEEEEecccccceeeEeECCCceEEeecCCC
Confidence            99999999999999999999999999999 999999999999999 78999999999999999999999998 8899999


Q ss_pred             CeEEEEECCCCeEEEEEeCCCCcEEEEEE---cCCEEEEEeCCCeEEEEECCCC---ceEeeCCccEEEEEEcCCCc-EE
Q psy7057         140 ASIRVWDSTTGKCVHTMYGHPNFIYSVAA---HGDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVAILPNSD-IV  212 (557)
Q Consensus       140 g~I~vwd~~~~~~~~~~~~h~~~V~~l~~---~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p~g~-l~  212 (557)
                      ++++|||++..+++.++.+|...|..|.|   .|.+|+|++.|+++++|...+.   +.+.+|...|.++.++++++ |+
T Consensus       367 nt~kVWDLR~r~~ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~~~~ksLaGHe~kV~s~Dis~d~~~i~  446 (459)
T KOG0272|consen  367 NTCKVWDLRMRSELYTIPAHSNLVSQVKYSPQEGYFLVTASYDNTVKIWSTRTWSPLKSLAGHEGKVISLDISPDSQAIA  446 (459)
T ss_pred             CcEEEeeecccccceecccccchhhheEecccCCeEEEEcccCcceeeecCCCcccchhhcCCccceEEEEeccCCceEE
Confidence            99999999999999999999999999999   4679999999999999997765   78899999999999999999 99


Q ss_pred             EEEcCCcEEEEe
Q psy7057         213 TGSSDGIVRVFS  224 (557)
Q Consensus       213 sg~~Dg~I~iwd  224 (557)
                      +++.|+++++|.
T Consensus       447 t~s~DRT~KLW~  458 (459)
T KOG0272|consen  447 TSSFDRTIKLWR  458 (459)
T ss_pred             EeccCceeeecc
Confidence            999999999995

>KOG0645|consensus

Probab=100.00  E-value=2.6e-32  Score=252.48  Aligned_cols=267  Identities=25%  Similarity=0.362  Sum_probs=229.3

Q ss_pred             EEEEEeccCcccEEEEEEcCC-Cc-EEEEECCCcEEEEcCCC--------------------CCCCCCCCEEEEEECCCe
Q psy7057           3 KLSTALYGHSMDVRSLSVTPD-GC-ILSASRDKSAKLWKPND--------------------LSPGAKVNTLLSASWDMT   60 (557)
Q Consensus         3 kl~~~l~gH~~~V~~l~~spd-g~-l~sgs~Dg~V~iWd~~~--------------------~~~~~~~~~l~sgs~Dg~   60 (557)
                      .+.+.++||.+.|..++|+|- |. |+||+.|+.||||+...                    ++++|.+++|++||.|.+
T Consensus         5 ~~~~~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~t   84 (312)
T KOG0645|consen    5 ILEQKLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDAT   84 (312)
T ss_pred             eeEEeecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeeccce
Confidence            356889999999999999998 77 88999999999999883                    788899999999999999


Q ss_pred             EEEEECCCC--eEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeC----CCcEEEEEeCCCCCEEEEEEeCC-Ce
Q psy7057          61 AKLWCLESQ--QCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSE----EGEFLKTLTGHTDCVRGLAVLND-TD  132 (557)
Q Consensus        61 i~iwd~~~~--~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~----~~~~~~~l~~h~~~V~~l~~~~~-~~  132 (557)
                      +.||.-..+  +++.+|.+|+..|.|++|+++| +|++++.|+.+-||..    +-+++..|.+|..-|..+.|+|. +.
T Consensus        85 ~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~dl  164 (312)
T KOG0645|consen   85 VVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTEDL  164 (312)
T ss_pred             EEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcCCcce
Confidence            999986654  6889999999999999999998 9999999999999983    34678899999999999999997 45


Q ss_pred             EEEEECCCeEEEEECC---CCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCCceEeeCCccEEEEEEcC
Q psy7057         133 FVSCSNDASIRVWDST---TGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILP  207 (557)
Q Consensus       133 lvs~s~Dg~I~vwd~~---~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~v~~v~~~p  207 (557)
                      |+++|.|.+|++|+-.   ...+++++.+|...|++++|  .|..|++++.|++++||...... -..|...++.++|. 
T Consensus       165 L~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~~~~-~~~~sr~~Y~v~W~-  242 (312)
T KOG0645|consen  165 LFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRLYTDL-SGMHSRALYDVPWD-  242 (312)
T ss_pred             eEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCCCceEEEecCCcceEeeeeccCc-chhcccceEeeeec-
Confidence            7799999999999755   45799999999999999999  57799999999999999855321 12355689999999 


Q ss_pred             CCcEEEEEcCCcEEEEecCCCCcch-----hHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecC
Q psy7057         208 NSDIVTGSSDGIVRVFSANPDRQAE-----DAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSAN  271 (557)
Q Consensus       208 ~g~l~sg~~Dg~I~iwd~~~~~~~~-----~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~  271 (557)
                      ++.|++++.|+.|++|........+     ......|...|.++.+.+.....+++++.||.|++|.+.
T Consensus       243 ~~~IaS~ggD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~s~~DDG~v~~W~l~  311 (312)
T KOG0645|consen  243 NGVIASGGGDDAIRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQWNPKVSNRLASGGDDGIVNFWELE  311 (312)
T ss_pred             ccceEeccCCCEEEEEEecCCCCCchHHHHHhhhcccccccceEEEcCCCCCceeecCCCceEEEEEec
Confidence            7779999999999999876432111     123345777899999999777889999999999999864

>KOG0285|consensus

Probab=100.00  E-value=3.3e-32  Score=259.96  Aligned_cols=269  Identities=20%  Similarity=0.307  Sum_probs=229.9

Q ss_pred             CcEEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEE
Q psy7057           1 MYKLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKL   63 (557)
Q Consensus         1 ~~kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~i   63 (557)
                      .||+.+.++||.+.|+|+++.|-+. |+||+.|++++|||+.+                +++++...++++++.|+.|+.
T Consensus       140 pwKl~rVi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~gedk~VKC  219 (460)
T KOG0285|consen  140 PWKLYRVISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKC  219 (460)
T ss_pred             cceehhhhhhccceEEEEeeCCCceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecCCCeeEE
Confidence            4899999999999999999999888 99999999999999987                677788899999999999999


Q ss_pred             EECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCC-CeEEEEECCC
Q psy7057          64 WCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLND-TDFVSCSNDA  140 (557)
Q Consensus        64 wd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~-~~lvs~s~Dg  140 (557)
                      ||++..+.++.+.+|-..|.|++..|.- .|++|+.|.++|+|| .+...+..+.+|..+|.++.+.|- +++++||.|+
T Consensus       220 wDLe~nkvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~GH~~~V~~V~~~~~dpqvit~S~D~  299 (460)
T KOG0285|consen  220 WDLEYNKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLSGHTNPVASVMCQPTDPQVITGSHDS  299 (460)
T ss_pred             EechhhhhHHHhccccceeEEEeccccceeEEecCCcceEEEeeecccceEEEecCCCCcceeEEeecCCCceEEecCCc
Confidence            9999999999999999999999999965 999999999999999 556679999999999999998864 7799999999


Q ss_pred             eEEEEECCCCeEEEEEeCCCCcEEEEEEcCC--EEEEEeCCCeEEEEECCCC---ceEeeCCccEEEEEEcCCCcEEEEE
Q psy7057         141 SIRVWDSTTGKCVHTMYGHPNFIYSVAAHGD--LITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVAILPNSDIVTGS  215 (557)
Q Consensus       141 ~I~vwd~~~~~~~~~~~~h~~~V~~l~~~~~--~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p~g~l~sg~  215 (557)
                      +|++||++.|+...++..|...|++++.+++  .+++++.| .|+-|++...   +.+.+|..-|.+++...|+-+++|+
T Consensus       300 tvrlWDl~agkt~~tlt~hkksvral~lhP~e~~fASas~d-nik~w~~p~g~f~~nlsgh~~iintl~~nsD~v~~~G~  378 (460)
T KOG0285|consen  300 TVRLWDLRAGKTMITLTHHKKSVRALCLHPKENLFASASPD-NIKQWKLPEGEFLQNLSGHNAIINTLSVNSDGVLVSGG  378 (460)
T ss_pred             eEEEeeeccCceeEeeecccceeeEEecCCchhhhhccCCc-cceeccCCccchhhccccccceeeeeeeccCceEEEcC
Confidence            9999999999999999999999999999654  56666665 6899997655   5678899999999999999999999


Q ss_pred             cCCcEEEEecCCCCcchhH---HHhcccc---eeEEEeccCCCceeEEEEeCCCcEEEEecC
Q psy7057         216 SDGIVRVFSANPDRQAEDA---VQAQYAE---EVKKLKSANEQEIGGVKVSDDGIVRVFSAN  271 (557)
Q Consensus       216 ~Dg~I~iwd~~~~~~~~~~---~~~~~~~---~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~  271 (557)
                      ..|.+..||.+++..-+..   ...+...   .+... +.......+++|..|.+|++|.-+
T Consensus       379 dng~~~fwdwksg~nyQ~~~t~vqpGSl~sEagI~as-~fDktg~rlit~eadKtIk~~keD  439 (460)
T KOG0285|consen  379 DNGSIMFWDWKSGHNYQRGQTIVQPGSLESEAGIFAS-CFDKTGSRLITGEADKTIKMYKED  439 (460)
T ss_pred             CceEEEEEecCcCcccccccccccCCccccccceeEE-eecccCceEEeccCCcceEEEecc
Confidence            9999999999876433222   1111111   12222 234455678999999999999744

>KOG0284|consensus

Probab=100.00  E-value=1.2e-32  Score=267.08  Aligned_cols=258  Identities=22%  Similarity=0.297  Sum_probs=225.9

Q ss_pred             cccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEE
Q psy7057          12 SMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLT   74 (557)
Q Consensus        12 ~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~   74 (557)
                      ...|..|.|.|+|+ |++|+..|.+.+|+...                +.++.++..++||+.+|.|++|+..- ..+..
T Consensus        96 kc~V~~v~WtPeGRRLltgs~SGEFtLWNg~~fnFEtilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnm-nnVk~  174 (464)
T KOG0284|consen   96 KCPVNVVRWTPEGRRLLTGSQSGEFTLWNGTSFNFETILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNM-NNVKI  174 (464)
T ss_pred             ccceeeEEEcCCCceeEeecccccEEEecCceeeHHHHhhhhcccceeEEEccCCCEEEEcCCCceEEecccch-hhhHH
Confidence            45899999999998 99999999999999765                67888999999999999999999765 44555


Q ss_pred             Eccc-CCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCC-CeEEEEECCCeEEEEECCCC
Q psy7057          75 IRQH-EMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLND-TDFVSCSNDASIRVWDSTTG  150 (557)
Q Consensus        75 l~~h-~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~-~~lvs~s~Dg~I~vwd~~~~  150 (557)
                      +..| ...|++++|+|.. .++++|.||+|+||| ...+....+.+|.-.|.++.|+|. +.++++|.|..|++||.+++
T Consensus       175 ~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg  254 (464)
T KOG0284|consen  175 IQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSG  254 (464)
T ss_pred             hhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCchhheeccCCCCcceeccCCccceeEEccCCceeEeecCCCc
Confidence            5555 5999999999955 999999999999999 566667788999999999999998 56889999999999999999


Q ss_pred             eEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC---ceEeeCCccEEEEEEcCCCc--EEEEEcCCcEEEE
Q psy7057         151 KCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVAILPNSD--IVTGSSDGIVRVF  223 (557)
Q Consensus       151 ~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p~g~--l~sg~~Dg~I~iw  223 (557)
                      +|+.++.+|+..|..+.|  ++++|+++|.|..++++|++..   +++++|...+++++|+|-..  |.+|+.||.|..|
T Consensus       255 ~cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~  334 (464)
T KOG0284|consen  255 SCLATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKELFTYRGHKKDVTSLTWHPLNESLFTSGGSDGSVVHW  334 (464)
T ss_pred             chhhhhhhccceEEEEEEcCCCCeeEEccCCceEEEEehhHhHHHHHhhcchhhheeeccccccccceeeccCCCceEEE
Confidence            999999999999999999  7789999999999999998744   77888999999999999876  7899999999999


Q ss_pred             ecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCC
Q psy7057         224 SANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANP  272 (557)
Q Consensus       224 d~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~  272 (557)
                      .+....++ .....+|...|+++.+.+-..+ +++||.|.++|+|....
T Consensus       335 ~v~~~~p~-~~i~~AHd~~iwsl~~hPlGhi-l~tgsnd~t~rfw~r~r  381 (464)
T KOG0284|consen  335 VVGLEEPL-GEIPPAHDGEIWSLAYHPLGHI-LATGSNDRTVRFWTRNR  381 (464)
T ss_pred             eccccccc-cCCCcccccceeeeecccccee-EeecCCCcceeeeccCC
Confidence            99844443 2334568889999998877654 78899999999998653

>KOG0281|consensus

Probab=100.00  E-value=1.1e-32  Score=262.07  Aligned_cols=257  Identities=23%  Similarity=0.311  Sum_probs=220.5

Q ss_pred             CcccEEEEEEcCCCcEEEEECCCcEEEEcCCC--------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEc
Q psy7057          11 HSMDVRSLSVTPDGCILSASRDKSAKLWKPND--------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIR   76 (557)
Q Consensus        11 H~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~--------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~   76 (557)
                      ....|.|+.+. |+++++|..|++|+|||.++              ++..-+...|++||.|.+|++||.++++++.++.
T Consensus       196 ~skgVYClQYD-D~kiVSGlrDnTikiWD~n~~~c~~~L~GHtGSVLCLqyd~rviisGSSDsTvrvWDv~tge~l~tli  274 (499)
T KOG0281|consen  196 NSKGVYCLQYD-DEKIVSGLRDNTIKIWDKNSLECLKILTGHTGSVLCLQYDERVIVSGSSDSTVRVWDVNTGEPLNTLI  274 (499)
T ss_pred             cCCceEEEEec-chhhhcccccCceEEeccccHHHHHhhhcCCCcEEeeeccceEEEecCCCceEEEEeccCCchhhHHh
Confidence            35689999875 55799999999999999988              3333346789999999999999999999999999


Q ss_pred             ccCCcEEEEEEcCCCEEEEEECCCeEEEEeCCCc----EEEEEeCCCCCEEEEEEeCCCeEEEEECCCeEEEEECCCCeE
Q psy7057          77 QHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGE----FLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKC  152 (557)
Q Consensus        77 ~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~~~~----~~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~~  152 (557)
                      +|...|..+.|+ +|+++++|.|.+|.+||+...    +.+.+.||...|..+.|+.. .++++|.|.+|++|++.++++
T Consensus       275 hHceaVLhlrf~-ng~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd~k-yIVsASgDRTikvW~~st~ef  352 (499)
T KOG0281|consen  275 HHCEAVLHLRFS-NGYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK-YIVSASGDRTIKVWSTSTCEF  352 (499)
T ss_pred             hhcceeEEEEEe-CCEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccccc-eEEEecCCceEEEEeccceee
Confidence            999999999986 679999999999999995432    34567899999999999643 688999999999999999999


Q ss_pred             EEEEeCCCCcEEEEEEcCCEEEEEeCCCeEEEEECCCC---ceEeeCCccEEEEEEcCCCcEEEEEcCCcEEEEecCCCC
Q psy7057         153 VHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVAILPNSDIVTGSSDGIVRVFSANPDR  229 (557)
Q Consensus       153 ~~~~~~h~~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p~g~l~sg~~Dg~I~iwd~~~~~  229 (557)
                      ++++.+|...|.|+.+.++++++||.|.+|++||...+   +.+.+|+.-|+++.|.. .++++|+.||+|+|||+....
T Consensus       353 vRtl~gHkRGIAClQYr~rlvVSGSSDntIRlwdi~~G~cLRvLeGHEeLvRciRFd~-krIVSGaYDGkikvWdl~aal  431 (499)
T KOG0281|consen  353 VRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDN-KRIVSGAYDGKIKVWDLQAAL  431 (499)
T ss_pred             ehhhhcccccceehhccCeEEEecCCCceEEEEeccccHHHHHHhchHHhhhheeecC-ceeeeccccceEEEEeccccc
Confidence            99999999999999999999999999999999997765   77889999999999963 349999999999999998764


Q ss_pred             cc-------hhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCCh
Q psy7057         230 QA-------EDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDR  274 (557)
Q Consensus       230 ~~-------~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~~  274 (557)
                      ..       +......+.+.+-.+.+.   ...+++++.|.+|.||+...+.
T Consensus       432 dpra~~~~~Cl~~lv~hsgRVFrLQFD---~fqIvsssHddtILiWdFl~~~  480 (499)
T KOG0281|consen  432 DPRAPASTLCLRTLVEHSGRVFRLQFD---EFQIISSSHDDTILIWDFLNGP  480 (499)
T ss_pred             CCcccccchHHHhhhhccceeEEEeec---ceEEEeccCCCeEEEEEcCCCC
Confidence            43       344555677777777654   4568999999999999987653

>KOG0263|consensus

Probab=99.97  E-value=5.7e-31  Score=274.76  Aligned_cols=218  Identities=22%  Similarity=0.408  Sum_probs=202.7

Q ss_pred             CcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC-----------------------------------------------
Q psy7057          11 HSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND-----------------------------------------------   42 (557)
Q Consensus        11 H~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~-----------------------------------------------   42 (557)
                      -...++|..|++|++ ||.|-.|..|++|.+..                                               
T Consensus       377 t~~~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~GH~GPVyg  456 (707)
T KOG0263|consen  377 TYQGVTCAEFSDDSSMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLYGHSGPVYG  456 (707)
T ss_pred             cCCcceeEeecCCcchhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEeecCCCceee
Confidence            346899999999998 77889999999998872                                               


Q ss_pred             CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCC
Q psy7057          43 LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTD  120 (557)
Q Consensus        43 ~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~  120 (557)
                      .+++|+.++|+++|.|+++|+|.+.+..++..+++|..+|+++.|+|.| +++|+|.|++.++|. ....+++.+.+|-.
T Consensus       457 ~sFsPd~rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~d~~~PlRifaghls  536 (707)
T KOG0263|consen  457 CSFSPDRRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFATASHDQTARLWSTDHNKPLRIFAGHLS  536 (707)
T ss_pred             eeecccccceeeccCCcceeeeecccceeEEEecCCCcceeeEEecCCceEEEecCCCceeeeeecccCCchhhhccccc
Confidence            6788899999999999999999999999999999999999999999999 999999999999999 55678899999999


Q ss_pred             CEEEEEEeCCCe-EEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC---ceEe
Q psy7057         121 CVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ---NSFM  194 (557)
Q Consensus       121 ~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~---~~~~  194 (557)
                      .|.|+.|+|+.. +++||.|.++|+||+.+|..++.|.||.++|.++++  +|.+|++|++|+.|.+||+...   ..+.
T Consensus       537 DV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~~v~~l~  616 (707)
T KOG0263|consen  537 DVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYLASGDEDGLIKIWDLANGSLVKQLK  616 (707)
T ss_pred             ccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCceEeecccCCcEEEEEcCCCcchhhhh
Confidence            999999999966 669999999999999999999999999999999999  8899999999999999998775   6778


Q ss_pred             eCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCC
Q psy7057         195 IPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPD  228 (557)
Q Consensus       195 ~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~  228 (557)
                      +|.+.|.++.|+.+|. |++||.|.+|++||+...
T Consensus       617 ~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~~  651 (707)
T KOG0263|consen  617 GHTGTIYSLSFSRDGNVLASGGADNSVRLWDLTKV  651 (707)
T ss_pred             cccCceeEEEEecCCCEEEecCCCCeEEEEEchhh
Confidence            8999999999999999 899999999999998653

>KOG0295|consensus

Probab=99.97  E-value=7.6e-31  Score=251.53  Aligned_cols=265  Identities=27%  Similarity=0.386  Sum_probs=236.5

Q ss_pred             EEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEE
Q psy7057           3 KLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWC   65 (557)
Q Consensus         3 kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd   65 (557)
                      .+.+.+.||..+|+.+-|.|+-. +++++.|++|++||..+                ++++..|.+|++++.|-.+.+||
T Consensus        99 ~l~~~l~g~r~~vt~v~~hp~~~~v~~as~d~tikv~D~~tg~~e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl~~~LWd  178 (406)
T KOG0295|consen   99 NLVQKLAGHRSSVTRVIFHPSEALVVSASEDATIKVFDTETGELERSLRGHTDSVFDISFDASGKYLATCSSDLSAKLWD  178 (406)
T ss_pred             CchhhhhccccceeeeeeccCceEEEEecCCceEEEEEccchhhhhhhhccccceeEEEEecCccEEEecCCccchhhee
Confidence            45677899999999999999987 77899999999999887                67778899999999999999999


Q ss_pred             CCC-CeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCCe
Q psy7057          66 LES-QQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDAS  141 (557)
Q Consensus        66 ~~~-~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~  141 (557)
                      ..+ .+++..+.+|+..|.+++|.|.| .|++++.|.+|+.|+ .++-++.++.+|...|+.+..+.+|. +++|+.|.+
T Consensus       179 ~~~~~~c~ks~~gh~h~vS~V~f~P~gd~ilS~srD~tik~We~~tg~cv~t~~~h~ewvr~v~v~~DGti~As~s~dqt  258 (406)
T KOG0295|consen  179 FDTFFRCIKSLIGHEHGVSSVFFLPLGDHILSCSRDNTIKAWECDTGYCVKTFPGHSEWVRMVRVNQDGTIIASCSNDQT  258 (406)
T ss_pred             HHHHHHHHHHhcCcccceeeEEEEecCCeeeecccccceeEEecccceeEEeccCchHhEEEEEecCCeeEEEecCCCce
Confidence            877 56788889999999999999988 999999999999999 68899999999999999999999998 559999999


Q ss_pred             EEEEECCCCeEEEEEeCCCCcEEEEEE------------cC-----CEEEEEeCCCeEEEEECCCC---ceEeeCCccEE
Q psy7057         142 IRVWDSTTGKCVHTMYGHPNFIYSVAA------------HG-----DLITSGGEDQCVCVYQNKAQ---NSFMIPAMSVW  201 (557)
Q Consensus       142 I~vwd~~~~~~~~~~~~h~~~V~~l~~------------~~-----~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~  201 (557)
                      +++|-+.+++|...+..|.-+|-|++|            .+     .++.+++.|++|++||+.++   .++.+|...|+
T Consensus       259 l~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr  338 (406)
T KOG0295|consen  259 LRVWVVATKQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVR  338 (406)
T ss_pred             EEEEEeccchhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEecccceee
Confidence            999999999999999999999999987            12     38999999999999998776   67788999999


Q ss_pred             EEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEec
Q psy7057         202 AVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSA  270 (557)
Q Consensus       202 ~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~  270 (557)
                      .++|+|.|+ |+++.+|+++|+||++..++....  ..|..-+..+.+....+ .+++||-|-++++|..
T Consensus       339 ~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~--~ah~hfvt~lDfh~~~p-~VvTGsVdqt~KvwEc  405 (406)
T KOG0295|consen  339 GVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTL--EAHEHFVTSLDFHKTAP-YVVTGSVDQTVKVWEC  405 (406)
T ss_pred             eeEEcCCCeEEEEEecCCcEEEEEeccceeeecc--CCCcceeEEEecCCCCc-eEEeccccceeeeeec
Confidence            999999999 889999999999999988766433  35666677787766655 7899999999999963

>KOG0276|consensus

Probab=99.97  E-value=3e-30  Score=261.77  Aligned_cols=249  Identities=22%  Similarity=0.280  Sum_probs=217.8

Q ss_pred             EEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEE
Q psy7057           3 KLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWC   65 (557)
Q Consensus         3 kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd   65 (557)
                      ++.++|..|+..|.++.|+|... ++++-.+|.|.||+.++                ..+-...+.+++|+.|..||+|+
T Consensus         4 ~~krk~~~rSdRVKsVd~HPtePw~la~LynG~V~IWnyetqtmVksfeV~~~PvRa~kfiaRknWiv~GsDD~~IrVfn   83 (794)
T KOG0276|consen    4 DFKRKFQSRSDRVKSVDFHPTEPWILAALYNGDVQIWNYETQTMVKSFEVSEVPVRAAKFIARKNWIVTGSDDMQIRVFN   83 (794)
T ss_pred             hhhhHhhccCCceeeeecCCCCceEEEeeecCeeEEEecccceeeeeeeecccchhhheeeeccceEEEecCCceEEEEe
Confidence            45677888999999999999987 88999999999999887                33445678999999999999999


Q ss_pred             CCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe--CCCcEEEEEeCCCCCEEEEEEeCC--CeEEEEECCC
Q psy7057          66 LESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS--EEGEFLKTLTGHTDCVRGLAVLND--TDFVSCSNDA  140 (557)
Q Consensus        66 ~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd--~~~~~~~~l~~h~~~V~~l~~~~~--~~lvs~s~Dg  140 (557)
                      .++++.+..+..|.+.|.|++.+|.. .++|+|.|-+|++||  ..-.+.+++.+|+.-|.+++|.|.  +.|+|+|-|+
T Consensus        84 ynt~ekV~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDr  163 (794)
T KOG0276|consen   84 YNTGEKVKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASASLDR  163 (794)
T ss_pred             cccceeeEEeeccccceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceeeeeccc
Confidence            99999999999999999999999987 999999999999999  455788999999999999999997  5599999999


Q ss_pred             eEEEEECCCCeEEEEEeCCCCcEEEEEE-cC---CEEEEEeCCCeEEEEECC--CC-ceEeeCCccEEEEEEcCCCc-EE
Q psy7057         141 SIRVWDSTTGKCVHTMYGHPNFIYSVAA-HG---DLITSGGEDQCVCVYQNK--AQ-NSFMIPAMSVWAVAILPNSD-IV  212 (557)
Q Consensus       141 ~I~vwd~~~~~~~~~~~~h~~~V~~l~~-~~---~~l~s~s~Dg~I~iwd~~--~~-~~~~~~~~~v~~v~~~p~g~-l~  212 (557)
                      +|++|.+.+..+..++.+|...|.|+.+ .+   .+|++|+.|.+|+|||..  +| +++.+|..-|..++|+|.-. |+
T Consensus       164 TVKVWslgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~Nvs~v~fhp~lpiii  243 (794)
T KOG0276|consen  164 TVKVWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEGHTNNVSFVFFHPELPIII  243 (794)
T ss_pred             cEEEEEcCCCCCceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhcccccceEEEecCCCcEEE
Confidence            9999999999999999999999999999 33   399999999999999954  44 89999999999999999988 88


Q ss_pred             EEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCc
Q psy7057         213 TGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQE  253 (557)
Q Consensus       213 sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~  253 (557)
                      +|++||++|||...+-++....  .-..+.++++.....+.
T Consensus       244 sgsEDGTvriWhs~Ty~lE~tL--n~gleRvW~I~~~k~~~  282 (794)
T KOG0276|consen  244 SGSEDGTVRIWNSKTYKLEKTL--NYGLERVWCIAAHKGDG  282 (794)
T ss_pred             EecCCccEEEecCcceehhhhh--hcCCceEEEEeecCCCC
Confidence            9999999999998877654322  22335566666555444

>KOG0265|consensus

Probab=99.97  E-value=4.1e-30  Score=241.07  Aligned_cols=258  Identities=22%  Similarity=0.290  Sum_probs=221.1

Q ss_pred             EeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC-----------------CCCCCCCCEEEEEECCCeEEEEECCC
Q psy7057           7 ALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND-----------------LSPGAKVNTLLSASWDMTAKLWCLES   68 (557)
Q Consensus         7 ~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~-----------------~~~~~~~~~l~sgs~Dg~i~iwd~~~   68 (557)
                      .+.||.+.|..+.|+|+|. |+||+.|..|.+|++..                 +.+..+++.|++++.|++++.||.++
T Consensus        42 ~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~t  121 (338)
T KOG0265|consen   42 LLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDAET  121 (338)
T ss_pred             hcCCCcceEEEEEECCCCCeEeecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCCceEEEEeccc
Confidence            4789999999999999998 99999999999999654                 67788999999999999999999999


Q ss_pred             CeEEEEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEeCC-CcEEEEEeCCCCCEEEEEEeCCC-eEEEEECCCeEEE
Q psy7057          69 QQCKLTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHSEE-GEFLKTLTGHTDCVRGLAVLNDT-DFVSCSNDASIRV  144 (557)
Q Consensus        69 ~~~~~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~~-~~~~~~l~~h~~~V~~l~~~~~~-~lvs~s~Dg~I~v  144 (557)
                      |++++.+++|...|+++.-+.-|  ++.||+.|+++++||.. ..+++++. ....++++.|...+ +.++|+-|+.|++
T Consensus       122 G~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~-~kyqltAv~f~d~s~qv~sggIdn~ikv  200 (338)
T KOG0265|consen  122 GKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFE-NKYQLTAVGFKDTSDQVISGGIDNDIKV  200 (338)
T ss_pred             ceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccc-cceeEEEEEecccccceeeccccCceee
Confidence            99999999999999999855555  88999999999999954 44455443 56789999998774 5899999999999


Q ss_pred             EECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC----ceE---eeCC----ccEEEEEEcCCCc-
Q psy7057         145 WDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ----NSF---MIPA----MSVWAVAILPNSD-  210 (557)
Q Consensus       145 wd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~----~~~---~~~~----~~v~~v~~~p~g~-  210 (557)
                      ||++....+.++.||.+.|+.|..  +|.++++-+.|.++++||.+..    +.+   .++.    .....++|+|++. 
T Consensus       201 Wd~r~~d~~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~~hnfeknlL~cswsp~~~~  280 (338)
T KOG0265|consen  201 WDLRKNDGLYTLSGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNLLKCSWSPNGTK  280 (338)
T ss_pred             eccccCcceEEeecccCceeeEEeccCCCccccccccceEEEEEecccCCCCceEEEeecchhhhhhhcceeeccCCCCc
Confidence            999999999999999999999998  7889999999999999996643    222   2222    2356788999999 


Q ss_pred             EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEE
Q psy7057         211 IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVF  268 (557)
Q Consensus       211 l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW  268 (557)
                      +-+|+.|+.+++||....+.  .....+|.+.|..+.+.+..++ ++++++|.+|.+=
T Consensus       281 i~ags~dr~vyvwd~~~r~~--lyklpGh~gsvn~~~Fhp~e~i-ils~~sdk~i~lg  335 (338)
T KOG0265|consen  281 ITAGSADRFVYVWDTTSRRI--LYKLPGHYGSVNEVDFHPTEPI-ILSCSSDKTIYLG  335 (338)
T ss_pred             cccccccceEEEeecccccE--EEEcCCcceeEEEeeecCCCcE-EEEeccCceeEee
Confidence            77888999999999876554  3566789999999999988875 8899999998763

>KOG0273|consensus

Probab=99.97  E-value=7.2e-30  Score=251.92  Aligned_cols=263  Identities=19%  Similarity=0.262  Sum_probs=234.9

Q ss_pred             EEeccCcccEEEEEEcCCCc--EEEEECCCcEEEEcCCC------------------------------CCCCCCCCEEE
Q psy7057           6 TALYGHSMDVRSLSVTPDGC--ILSASRDKSAKLWKPND------------------------------LSPGAKVNTLL   53 (557)
Q Consensus         6 ~~l~gH~~~V~~l~~spdg~--l~sgs~Dg~V~iWd~~~------------------------------~~~~~~~~~l~   53 (557)
                      +.+. |+.+|.+.+|+|-..  |++++.|-+.++|++..                              ++|+.+|..|+
T Consensus       173 kvl~-~~~~V~~~~WnP~~~~llasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~~G~~La  251 (524)
T KOG0273|consen  173 KVLR-HESEVFICAWNPLRDGLLASGSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNNDGTLLA  251 (524)
T ss_pred             eecc-CCCceEEEecCchhhhhhhccCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecCCCCeEE
Confidence            3445 999999999999654  78999999999999873                              77888899999


Q ss_pred             EEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCC
Q psy7057          54 SASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDT  131 (557)
Q Consensus        54 sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~  131 (557)
                      +|+.||.+|+|+. +|..+.+|..|+++|.++.|+..| +|++++.|+++.+|| .++.....+.-|..+-..+.|..+.
T Consensus       252 tG~~~G~~riw~~-~G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q~f~~~s~~~lDVdW~~~~  330 (524)
T KOG0273|consen  252 TGSEDGEARIWNK-DGNLISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQQFEFHSAPALDVDWQSND  330 (524)
T ss_pred             EeecCcEEEEEec-CchhhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceEEEeeeeccCCccceEEecCc
Confidence            9999999999995 568889999999999999999988 999999999999999 7888888888888887889999889


Q ss_pred             eEEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCeEEEEECCCC---ceEeeCCccEEEEEEc
Q psy7057         132 DFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAH--GDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVAIL  206 (557)
Q Consensus       132 ~lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~~--~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~  206 (557)
                      .|++++.|+.|+|+.+....++.++.+|.+.|.+|.|+  +.+|++||.|++++||..+..   ..+..|...|+.+.|+
T Consensus       331 ~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~Hskei~t~~ws  410 (524)
T KOG0273|consen  331 EFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSVHDLQAHSKEIYTIKWS  410 (524)
T ss_pred             eEeecCCCceEEEEEecCCCcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCcchhhhhhhccceeeEeec
Confidence            99999999999999999899999999999999999995  789999999999999996544   7888999999999999


Q ss_pred             CCCc----------EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCC
Q psy7057         207 PNSD----------IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPD  273 (557)
Q Consensus       207 p~g~----------l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~  273 (557)
                      |.|.          +++++.|++|++||+..+.++.  .+..|..+|..+.+.+... ++++|+-||.|.+|+....
T Consensus       411 p~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~--~f~kH~~pVysvafS~~g~-ylAsGs~dg~V~iws~~~~  484 (524)
T KOG0273|consen  411 PTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIH--TLMKHQEPVYSVAFSPNGR-YLASGSLDGCVHIWSTKTG  484 (524)
T ss_pred             CCCCccCCCcCCceEEEeecCCeEEEEEccCCceeE--eeccCCCceEEEEecCCCc-EEEecCCCCeeEeccccch
Confidence            9642          8899999999999999887764  3556888999999987766 5899999999999997765

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=99.97  E-value=6.9e-29  Score=244.28  Aligned_cols=262  Identities=32%  Similarity=0.479  Sum_probs=221.0

Q ss_pred             EEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEECC
Q psy7057           5 STALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCLE   67 (557)
Q Consensus         5 ~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~~   67 (557)
                      .++|++|.++|++++|+|++. |++++.||.|++|++.+                +.+.++++.+++++.++.+++|++.
T Consensus         2 ~~~~~~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~   81 (289)
T cd00200           2 RRTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLE   81 (289)
T ss_pred             chHhcccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcC
Confidence            457889999999999999987 88999999999999864                4566677899999999999999999


Q ss_pred             CCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCC-CcEEEEEeCCCCCEEEEEEeCCCeEE-EEECCCeEEE
Q psy7057          68 SQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEE-GEFLKTLTGHTDCVRGLAVLNDTDFV-SCSNDASIRV  144 (557)
Q Consensus        68 ~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~-~~~~~~l~~h~~~V~~l~~~~~~~lv-s~s~Dg~I~v  144 (557)
                      +++....+..|...|.++.|++++ ++++++.++.+++|+.. ++....+..|...|.+++++|++.++ +++.|+.|++
T Consensus        82 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i  161 (289)
T cd00200          82 TGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKL  161 (289)
T ss_pred             cccceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcCcCCEEEEEcCCCcEEE
Confidence            888888899999999999999987 67777779999999965 77788888899999999999987765 5555999999


Q ss_pred             EECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC---ceEeeCCccEEEEEEcCCCc-EEEEEcCC
Q psy7057         145 WDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVAILPNSD-IVTGSSDG  218 (557)
Q Consensus       145 wd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg  218 (557)
                      ||+++++++..+..|...+.++.+  +++.+++++.++.|++||.+..   ..+..+...+.+++++|++. +++++.|+
T Consensus       162 ~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  241 (289)
T cd00200         162 WDLRTGKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSVAFSPDGYLLASGSEDG  241 (289)
T ss_pred             EEccccccceeEecCccccceEEECCCcCEEEEecCCCcEEEEECCCCceecchhhcCCceEEEEEcCCCcEEEEEcCCC
Confidence            999999999999999999999999  4458999999999999998754   44446777999999999977 55555599


Q ss_pred             cEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEe
Q psy7057         219 IVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFS  269 (557)
Q Consensus       219 ~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~  269 (557)
                      .|++|++..........  .+...+..+.+.+.. ..+++++.||.|++|+
T Consensus       242 ~i~i~~~~~~~~~~~~~--~~~~~i~~~~~~~~~-~~l~~~~~d~~i~iw~  289 (289)
T cd00200         242 TIRVWDLRTGECVQTLS--GHTNSVTSLAWSPDG-KRLASGSADGTIRIWD  289 (289)
T ss_pred             cEEEEEcCCceeEEEcc--ccCCcEEEEEECCCC-CEEEEecCCCeEEecC
Confidence            99999998765543322  455678888877664 4689999999999995

>KOG0291|consensus

Probab=99.97  E-value=7.2e-28  Score=249.26  Aligned_cols=343  Identities=18%  Similarity=0.252  Sum_probs=252.6

Q ss_pred             cEEEEEeccCcccEEEEEEcCCCc-EEEEE-CCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEE
Q psy7057           2 YKLSTALYGHSMDVRSLSVTPDGC-ILSAS-RDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKL   63 (557)
Q Consensus         2 ~kl~~~l~gH~~~V~~l~~spdg~-l~sgs-~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~i   63 (557)
                      |.+++.|.--..+|..++|+..|. |+.|| .-|.+-||+++.                +.++|+|+++++|+.||.|+|
T Consensus       297 f~lih~LSis~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsYVlKQQgH~~~i~~l~YSpDgq~iaTG~eDgKVKv  376 (893)
T KOG0291|consen  297 FNLIHSLSISDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESYVLKQQGHSDRITSLAYSPDGQLIATGAEDGKVKV  376 (893)
T ss_pred             ceEEEEeecccceeeEEEecccCCEEEEcCCccceEEEEEeeccceeeeccccccceeeEEECCCCcEEEeccCCCcEEE
Confidence            677888887788999999999998 77655 458999999876                788999999999999999999


Q ss_pred             EECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCC-CCCEEEEEEeCCCeEE-EEECC
Q psy7057          64 WCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGH-TDCVRGLAVLNDTDFV-SCSND  139 (557)
Q Consensus        64 wd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h-~~~V~~l~~~~~~~lv-s~s~D  139 (557)
                      ||..++-|..++..|+..|+.+.|+..+ .+++.|.||+|+.|| ...+..+++... .-...|++..|.|.++ +|+.|
T Consensus       377 Wn~~SgfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p~QfscvavD~sGelV~AG~~d  456 (893)
T KOG0291|consen  377 WNTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVDPSGELVCAGAQD  456 (893)
T ss_pred             EeccCceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccceeeeecCCCceeeeEEEEcCCCCEEEeeccc
Confidence            9999999999999999999999999988 899999999999999 677888888743 3456788888889877 55555


Q ss_pred             C-eEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC---ceEeeCCccEEEEEEcCCCc-EE
Q psy7057         140 A-SIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVAILPNSD-IV  212 (557)
Q Consensus       140 g-~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p~g~-l~  212 (557)
                      . .|.+|++++|+.+..+.||.++|.+++|  +++.|+++|.|.+||+||.-..   ..-..+...+..++|+|+|+ ++
T Consensus       457 ~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s~~~vEtl~i~sdvl~vsfrPdG~ela  536 (893)
T KOG0291|consen  457 SFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSSSGTVETLEIRSDVLAVSFRPDGKELA  536 (893)
T ss_pred             eEEEEEEEeecCeeeehhcCCCCcceeeEEccccCeEEeccccceEEEEEeeccCceeeeEeeccceeEEEEcCCCCeEE
Confidence            4 4999999999999999999999999888  7889999999999999994222   22233456799999999999 99


Q ss_pred             EEEcCCcEEEEecCCCCcchhH------------------HHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCCh
Q psy7057         213 TGSSDGIVRVFSANPDRQAEDA------------------VQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDR  274 (557)
Q Consensus       213 sg~~Dg~I~iwd~~~~~~~~~~------------------~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~~  274 (557)
                      ++.-||.|.+||.....+....                  .........+.++...+. ..+++|+....|++|++.++-
T Consensus       537 VaTldgqItf~d~~~~~q~~~IdgrkD~~~gR~~~D~~ta~~sa~~K~Ftti~ySaDG-~~IlAgG~sn~iCiY~v~~~v  615 (893)
T KOG0291|consen  537 VATLDGQITFFDIKEAVQVGSIDGRKDLSGGRKETDRITAENSAKGKTFTTICYSADG-KCILAGGESNSICIYDVPEGV  615 (893)
T ss_pred             EEEecceEEEEEhhhceeeccccchhhccccccccceeehhhcccCCceEEEEEcCCC-CEEEecCCcccEEEEECchhh
Confidence            9999999999998765443111                  011112334555554444 357888888899999887753


Q ss_pred             hhHHHH------HHHHHHHH--HHHhhhhhcccCCeeccCCCCcccccCCCccCccEEEEe--eCCeEEEEEEecCCCce
Q psy7057         275 QAEDAV------QAQYAEEV--KKLKSANEQEIGGVKVSDLPGKEVLYEPGKADGDVKMVR--EGSTVVAYSWSEASREW  344 (557)
Q Consensus       275 ~~~~~~------~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~G~~~~~~~~~~--~g~~~~~~~w~~~~~~W  344 (557)
                      .+..-.      ...+.+.+  +++.+...-++.+...+++.+.-...+||...|...-+|  +.-++...+++++++.|
T Consensus       616 llkkfqiS~N~sLdg~~efln~rkmtEfG~~~LiD~e~~~~e~~i~~~lpG~~~gdlssRr~rpeIrv~sv~fsPtgraF  695 (893)
T KOG0291|consen  616 LLKKFQISDNRSLDGVLEFLNRRKMTEFGNMDLIDTEESDLEGRIDIALPGVQRGDLSSRRFRPEIRVTSVQFSPTGRAF  695 (893)
T ss_pred             eeeeEEeccccchhHHHHHhccccccccCCccccccccccccccccccCCccccCCccccccCceEEEEEEEECCCcCee
Confidence            322100      00000111  111111111111113344555555678888777554443  33446666788888877


Q ss_pred             e
Q psy7057         345 N  345 (557)
Q Consensus       345 ~  345 (557)
                      -
T Consensus       696 A  696 (893)
T KOG0291|consen  696 A  696 (893)
T ss_pred             e
Confidence            6

>KOG0319|consensus

Probab=99.97  E-value=2.3e-29  Score=260.14  Aligned_cols=280  Identities=15%  Similarity=0.252  Sum_probs=235.1

Q ss_pred             cEEEEEeccCcccEEEEEEcC-CCc-EEEEECCCcEEEEcCCC---------------CCCCCCCCEEEEEECCCeEEEE
Q psy7057           2 YKLSTALYGHSMDVRSLSVTP-DGC-ILSASRDKSAKLWKPND---------------LSPGAKVNTLLSASWDMTAKLW   64 (557)
Q Consensus         2 ~kl~~~l~gH~~~V~~l~~sp-dg~-l~sgs~Dg~V~iWd~~~---------------~~~~~~~~~l~sgs~Dg~i~iw   64 (557)
                      .++.+.+-|..+.|.+|+|-. +.. |+.++..+.+|+|+..+               +....++.+|+|||.|.++++|
T Consensus       313 l~i~k~ivG~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~~c~ii~GH~e~vlSL~~~~~g~llat~sKD~svilW  392 (775)
T KOG0319|consen  313 LTIVKQIVGYNDEILDMKFLGPEESHLAVATNSPELRLYTLPTSYCQIIPGHTEAVLSLDVWSSGDLLATGSKDKSVILW  392 (775)
T ss_pred             cEEehhhcCCchhheeeeecCCccceEEEEeCCCceEEEecCCCceEEEeCchhheeeeeecccCcEEEEecCCceEEEE
Confidence            467788889999999999875 334 99999999999998877               3322567899999999999999


Q ss_pred             ECCCCe----EEEEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEeCCC----c--EEE----EEeCCCCCEEEEEEe
Q psy7057          65 CLESQQ----CKLTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHSEEG----E--FLK----TLTGHTDCVRGLAVL  128 (557)
Q Consensus        65 d~~~~~----~~~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~~~----~--~~~----~l~~h~~~V~~l~~~  128 (557)
                      .++++.    ++....+|+..|.+++++..+  .|+++|.|+++++|+...    .  .+.    +...|...|+|++++
T Consensus       393 r~~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia  472 (775)
T KOG0319|consen  393 RLNNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIA  472 (775)
T ss_pred             EecCCcchhhhhhhhcccccccceeeecccCccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccceEec
Confidence            885543    445568899999999998766  899999999999999433    1  111    335799999999999


Q ss_pred             CCCe-EEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC---ceEeeCCccEEE
Q psy7057         129 NDTD-FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWA  202 (557)
Q Consensus       129 ~~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~  202 (557)
                      |+.. ++|||.|++.+||++.......++.+|...|+|+.|  ....++|+|.|++|+||.+.+.   +++.+|...|..
T Consensus       473 ~ndkLiAT~SqDktaKiW~le~~~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~eGH~~aVlr  552 (775)
T KOG0319|consen  473 PNDKLIATGSQDKTAKIWDLEQLRLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFEGHTSAVLR  552 (775)
T ss_pred             CCCceEEecccccceeeecccCceEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEeccceeeeeecCccceeEe
Confidence            9977 669999999999999999999999999999999999  4559999999999999997654   889999999999


Q ss_pred             EEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCChhhHHHHH
Q psy7057         203 VAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQAEDAVQ  281 (557)
Q Consensus       203 v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~~~~~~~~~  281 (557)
                      +.|..++. |++++.||-|++|++++....  .....|...++.+...+... .++||+.||.|.+|.=.++....++..
T Consensus       553 a~F~~~~~qliS~~adGliKlWnikt~eC~--~tlD~H~DrvWaL~~~~~~~-~~~tgg~Dg~i~~wkD~Te~~~~ee~~  629 (775)
T KOG0319|consen  553 ASFIRNGKQLISAGADGLIKLWNIKTNECE--MTLDAHNDRVWALSVSPLLD-MFVTGGGDGRIIFWKDVTEEEQNEEQE  629 (775)
T ss_pred             eeeeeCCcEEEeccCCCcEEEEeccchhhh--hhhhhccceeEEEeecCccc-eeEecCCCeEEEEeecCcHHHHHHHHH
Confidence            99999988 999999999999999987654  56678899999998877666 689999999999997666655554444


Q ss_pred             HHH
Q psy7057         282 AQY  284 (557)
Q Consensus       282 ~~~  284 (557)
                      ++.
T Consensus       630 K~~  632 (775)
T KOG0319|consen  630 KRE  632 (775)
T ss_pred             HHH
Confidence            443

>KOG0266|consensus

Probab=99.97  E-value=8.6e-29  Score=263.39  Aligned_cols=267  Identities=27%  Similarity=0.459  Sum_probs=222.6

Q ss_pred             cEEEEEeccC-cccEEEEEEcCCCc-EEEEECCCcEEEEcCCC------------------CCCCCCCCEEEEEECCCeE
Q psy7057           2 YKLSTALYGH-SMDVRSLSVTPDGC-ILSASRDKSAKLWKPND------------------LSPGAKVNTLLSASWDMTA   61 (557)
Q Consensus         2 ~kl~~~l~gH-~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~------------------~~~~~~~~~l~sgs~Dg~i   61 (557)
                      |.+.+.+.+| ...|.|+.|+++|+ +++++.|+.+++|+...                  +++++++.++++++.|+++
T Consensus       148 ~~~~~~~~~~~~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~ti  227 (456)
T KOG0266|consen  148 FSLEQTLAGHECPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSDDKTL  227 (456)
T ss_pred             ceeeeeecccccCceEEEEEcCCCCeEEEccCCCcEEEeecccccchhhccccccccceeeeEECCCCcEEEEecCCceE
Confidence            5566677665 78999999999999 88999999999999822                  7788899999999999999


Q ss_pred             EEEEC-CCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEE
Q psy7057          62 KLWCL-ESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCS  137 (557)
Q Consensus        62 ~iwd~-~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s  137 (557)
                      +|||+ ..+..++++.+|...|++++|+|++ ++++|+.|++|+||| ..++++..+.+|.+.|++++|++++. |++++
T Consensus       228 riwd~~~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l~s~s  307 (456)
T KOG0266|consen  228 RIWDLKDDGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSPDGNLLVSAS  307 (456)
T ss_pred             EEeeccCCCeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECCCCCEEEEcC
Confidence            99999 5568999999999999999999999 999999999999999 45799999999999999999999977 66889


Q ss_pred             CCCeEEEEECCCCe--EEEEEeCCCCc--EEEEEE--cCCEEEEEeCCCeEEEEECCCC---ceEeeCCcc---EEEEEE
Q psy7057         138 NDASIRVWDSTTGK--CVHTMYGHPNF--IYSVAA--HGDLITSGGEDQCVCVYQNKAQ---NSFMIPAMS---VWAVAI  205 (557)
Q Consensus       138 ~Dg~I~vwd~~~~~--~~~~~~~h~~~--V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~---v~~v~~  205 (557)
                      .|+.|++||+.++.  ++..+.++...  ++++.|  ++.++++++.|+.+++|++...   .....|...   +.+...
T Consensus       308 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~~~~~~~~~~~~~~~~~~~~~  387 (456)
T KOG0266|consen  308 YDGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSGKSVGTYTGHSNLVRCIFSPTL  387 (456)
T ss_pred             CCccEEEEECCCCceeeeecccCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEccCCcceeeecccCCcceeEecccc
Confidence            99999999999999  67788777655  899999  7789999999999999998755   555666553   444555


Q ss_pred             cCCCc-EEEEEcCCcEEEEecCCCCcchhHHHhcc-cceeEEEeccCCCceeEEEEe--CCCcEEEEecC
Q psy7057         206 LPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQY-AEEVKKLKSANEQEIGGVKVS--DDGIVRVFSAN  271 (557)
Q Consensus       206 ~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~-~~~v~~l~~~~~~~~~~vs~s--~DG~IrvW~~~  271 (557)
                      ++.+. +++|+.|+.|++|+..+.....  ....+ ...+..+.+.+... .+++.+  .|+.+++|..+
T Consensus       388 ~~~~~~i~sg~~d~~v~~~~~~s~~~~~--~l~~h~~~~~~~~~~~~~~~-~~~s~s~~~d~~~~~w~~~  454 (456)
T KOG0266|consen  388 STGGKLIYSGSEDGSVYVWDSSSGGILQ--RLEGHSKAAVSDLSSHPTEN-LIASSSFEGDGLIRLWKYD  454 (456)
T ss_pred             cCCCCeEEEEeCCceEEEEeCCccchhh--hhcCCCCCceeccccCCCcC-eeeecCcCCCceEEEecCC
Confidence            67777 8899999999999999865443  33344 55555665555444 455554  89999999764

>KOG0286|consensus

Probab=99.97  E-value=5.4e-29  Score=232.72  Aligned_cols=228  Identities=19%  Similarity=0.259  Sum_probs=206.6

Q ss_pred             CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCC-------cEEEE
Q psy7057          43 LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEG-------EFLKT  114 (557)
Q Consensus        43 ~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~-------~~~~~  114 (557)
                      +.+.++.++|+++|.||.+.|||.-+...++.+.-...-|..++|+|.+ .+++|+.|+...||+++.       ...+.
T Consensus        61 ~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN~Csiy~ls~~d~~g~~~v~r~  140 (343)
T KOG0286|consen   61 MDWSTDSRRIVSASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDNKCSIYPLSTRDAEGNVRVSRE  140 (343)
T ss_pred             eEecCCcCeEEeeccCCeEEEEEcccccceeEEecCceeEEEEEECCCCCeEEecCcCceeEEEecccccccccceeeee
Confidence            4577889999999999999999999988888888889999999999998 999999999999999442       23567


Q ss_pred             EeCCCCCEEEEEEeCCCeEEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE---cCCEEEEEeCCCeEEEEECCCC-
Q psy7057         115 LTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA---HGDLITSGGEDQCVCVYQNKAQ-  190 (557)
Q Consensus       115 l~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~---~~~~l~s~s~Dg~I~iwd~~~~-  190 (557)
                      +.+|++.+.|+.|.+++.|+++|.|.++.+||+.+++.+..|.+|.+-|.++++   +++.+++|+.|+..++||++.. 
T Consensus       141 l~gHtgylScC~f~dD~~ilT~SGD~TCalWDie~g~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~  220 (343)
T KOG0286|consen  141 LAGHTGYLSCCRFLDDNHILTGSGDMTCALWDIETGQQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQ  220 (343)
T ss_pred             ecCccceeEEEEEcCCCceEecCCCceEEEEEcccceEEEEecCCcccEEEEecCCCCCCeEEecccccceeeeeccCcc
Confidence            889999999999999999999999999999999999999999999999999998   5689999999999999998876 


Q ss_pred             --ceEeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEE
Q psy7057         191 --NSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRV  267 (557)
Q Consensus       191 --~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~Irv  267 (557)
                        +.+.+|..-|++|+|.|+|. |++|+.|++.|+||++..+++..+........++++.+....+ .+++|..|.++.|
T Consensus       221 c~qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~SGR-lLfagy~d~~c~v  299 (343)
T KOG0286|consen  221 CVQTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQELAVYSHDSIICGITSVAFSKSGR-LLFAGYDDFTCNV  299 (343)
T ss_pred             eeEeecccccccceEEEccCCCeeeecCCCceeEEEeecCCcEEeeeccCcccCCceeEEEccccc-EEEeeecCCceeE
Confidence              88999999999999999999 9999999999999999998887777777777788888766555 5788899999999


Q ss_pred             EecC
Q psy7057         268 FSAN  271 (557)
Q Consensus       268 W~~~  271 (557)
                      ||.-
T Consensus       300 WDtl  303 (343)
T KOG0286|consen  300 WDTL  303 (343)
T ss_pred             eecc
Confidence            9854

>KOG0291|consensus

Probab=99.97  E-value=8.1e-29  Score=256.25  Aligned_cols=231  Identities=19%  Similarity=0.269  Sum_probs=191.0

Q ss_pred             CCCCCCCCEEEEEECC-CeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCC
Q psy7057          43 LSPGAKVNTLLSASWD-MTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHT  119 (557)
Q Consensus        43 ~~~~~~~~~l~sgs~D-g~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~  119 (557)
                      ++++..|+.|+.|+.. |.+-||++.+...+...++|...+.|++++||| ++++|+.||.|+||| .++-|+.++..|+
T Consensus       313 ~~~N~tGDWiA~g~~klgQLlVweWqsEsYVlKQQgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~SgfC~vTFteHt  392 (893)
T KOG0291|consen  313 VSFNSTGDWIAFGCSKLGQLLVWEWQSESYVLKQQGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQSGFCFVTFTEHT  392 (893)
T ss_pred             EEecccCCEEEEcCCccceEEEEEeeccceeeeccccccceeeEEECCCCcEEEeccCCCcEEEEeccCceEEEEeccCC
Confidence            3455567778877655 788899988888888889999999999999999 999999999999999 7888999999999


Q ss_pred             CCEEEEEEeCCCe-EEEEECCCeEEEEECCCCeEEEEEeCC-CCcEEEEEEc--CCEEEEEeCCC-eEEEEECCCC---c
Q psy7057         120 DCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHTMYGH-PNFIYSVAAH--GDLITSGGEDQ-CVCVYQNKAQ---N  191 (557)
Q Consensus       120 ~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h-~~~V~~l~~~--~~~l~s~s~Dg-~I~iwd~~~~---~  191 (557)
                      +.|+.++|+..+. +++.|-||+||.||+...++.++|... +....|++.+  |..+.+|+.|. .|.+|+..++   .
T Consensus       393 s~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllD  472 (893)
T KOG0291|consen  393 SGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLD  472 (893)
T ss_pred             CceEEEEEEecCCEEEEeecCCeEEeeeecccceeeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeee
Confidence            9999999999877 779999999999999999999999854 3455677775  77787888776 6999998777   5


Q ss_pred             eEeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEec
Q psy7057         192 SFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSA  270 (557)
Q Consensus       192 ~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~  270 (557)
                      .+.+|+++|.+++|+|.+. |++++.|.+||+|++-......  +.-.....+..+.+.|+.. .++..+.||.|.+|+.
T Consensus       473 iLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s~~~v--Etl~i~sdvl~vsfrPdG~-elaVaTldgqItf~d~  549 (893)
T KOG0291|consen  473 ILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSSSGTV--ETLEIRSDVLAVSFRPDGK-ELAVATLDGQITFFDI  549 (893)
T ss_pred             hhcCCCCcceeeEEccccCeEEeccccceEEEEEeeccCcee--eeEeeccceeEEEEcCCCC-eEEEEEecceEEEEEh
Confidence            6789999999999999999 9999999999999986542211  1112344566777766655 4778889999999998


Q ss_pred             CCChhh
Q psy7057         271 NPDRQA  276 (557)
Q Consensus       271 ~~~~~~  276 (557)
                      ....+.
T Consensus       550 ~~~~q~  555 (893)
T KOG0291|consen  550 KEAVQV  555 (893)
T ss_pred             hhceee
Confidence            876554

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.97  E-value=2.6e-28  Score=277.79  Aligned_cols=261  Identities=17%  Similarity=0.223  Sum_probs=215.5

Q ss_pred             eccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC-----------------------CCCCC-CCCEEEEEECCCeEE
Q psy7057           8 LYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND-----------------------LSPGA-KVNTLLSASWDMTAK   62 (557)
Q Consensus         8 l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~-----------------------~~~~~-~~~~l~sgs~Dg~i~   62 (557)
                      +.+|.+.|++++|+|+|. |++|+.|++|+||+...                       +.+++ .+.+|++++.|++|+
T Consensus       479 ~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~las~~~Dg~v~  558 (793)
T PLN00181        479 LLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELASRSKLSGICWNSYIKSQVASSNFEGVVQ  558 (793)
T ss_pred             ccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEecccCceeeEEeccCCCCEEEEEeCCCeEE
Confidence            445999999999999998 88999999999998642                       22222 367899999999999


Q ss_pred             EEECCCCeEEEEEcccCCcEEEEEEcC-CC-EEEEEECCCeEEEEeC-CCcEEEEEeCCCCCEEEEEEeC-CCe-EEEEE
Q psy7057          63 LWCLESQQCKLTIRQHEMAVWGVIQLA-NG-IIVTGCADKTIKLHSE-EGEFLKTLTGHTDCVRGLAVLN-DTD-FVSCS  137 (557)
Q Consensus        63 iwd~~~~~~~~~l~~h~~~V~~l~~~~-~~-~l~sgs~dg~I~vwd~-~~~~~~~l~~h~~~V~~l~~~~-~~~-lvs~s  137 (557)
                      +||+.+++.+..+.+|...|++++|+| ++ +|++|+.|++|++||. ++.++..+..+ ..|.++.|++ ++. |++|+
T Consensus       559 lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~-~~v~~v~~~~~~g~~latgs  637 (793)
T PLN00181        559 VWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTK-ANICCVQFPSESGRSLAFGS  637 (793)
T ss_pred             EEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEecC-CCeEEEEEeCCCCCEEEEEe
Confidence            999999999999999999999999997 55 8999999999999994 56777777754 6799999965 454 78999


Q ss_pred             CCCeEEEEECCCCe-EEEEEeCCCCcEEEEEE-cCCEEEEEeCCCeEEEEECCC--------C-ceEeeCCccEEEEEEc
Q psy7057         138 NDASIRVWDSTTGK-CVHTMYGHPNFIYSVAA-HGDLITSGGEDQCVCVYQNKA--------Q-NSFMIPAMSVWAVAIL  206 (557)
Q Consensus       138 ~Dg~I~vwd~~~~~-~~~~~~~h~~~V~~l~~-~~~~l~s~s~Dg~I~iwd~~~--------~-~~~~~~~~~v~~v~~~  206 (557)
                      .|++|++||+++.+ ++..+.+|...|.++.| ++..|++++.|++|++||+..        . ..+.+|...+.+++|+
T Consensus       638 ~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~~~~~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s  717 (793)
T PLN00181        638 ADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFVDSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLS  717 (793)
T ss_pred             CCCeEEEEECCCCCccceEecCCCCCEEEEEEeCCCEEEEEECCCEEEEEeCCCCccccCCcceEEEcCCCCCeeEEEEc
Confidence            99999999998765 57788899999999999 788999999999999999752        1 5667788899999999


Q ss_pred             CCCc-EEEEEcCCcEEEEecCCCCcchh-----------HHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEec
Q psy7057         207 PNSD-IVTGSSDGIVRVFSANPDRQAED-----------AVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSA  270 (557)
Q Consensus       207 p~g~-l~sg~~Dg~I~iwd~~~~~~~~~-----------~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~  270 (557)
                      |++. |++|+.|+.|++|+.....+...           .....+...+..+.+.+... .+++++.||.|+||++
T Consensus       718 ~~~~~lasgs~D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~V~~v~ws~~~~-~lva~~~dG~I~i~~~  792 (793)
T PLN00181        718 VSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSGLEVDDASQFISSVCWRGQSS-TLVAANSTGNIKILEM  792 (793)
T ss_pred             CCCCEEEEEeCCCEEEEEECCCCCceEEEecccCCcccccccCCCCcEEEEEEEcCCCC-eEEEecCCCcEEEEec
Confidence            9988 88999999999999765432210           01122345577888776554 5899999999999985

>KOG0273|consensus

Probab=99.97  E-value=6.7e-29  Score=245.09  Aligned_cols=256  Identities=25%  Similarity=0.345  Sum_probs=223.5

Q ss_pred             cccEEEEEEcCCCc-EEEEECCCcEEEEcCCC---------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEE
Q psy7057          12 SMDVRSLSVTPDGC-ILSASRDKSAKLWKPND---------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTI   75 (557)
Q Consensus        12 ~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~---------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l   75 (557)
                      ...|++|+|+.+|. |++|+.||.+|||+...               +.++..+.+|++++.|+++.+||..+++....+
T Consensus       235 nkdVT~L~Wn~~G~~LatG~~~G~~riw~~~G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q~f  314 (524)
T KOG0273|consen  235 NKDVTSLDWNNDGTLLATGSEDGEARIWNKDGNLISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQQF  314 (524)
T ss_pred             cCCcceEEecCCCCeEEEeecCcEEEEEecCchhhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceEEEee
Confidence            36899999999999 88999999999999876               778889999999999999999999999999999


Q ss_pred             cccCCcEEEEEEcCCCEEEEEECCCeEEEEeC-CCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEEEEECCCCeEE
Q psy7057          76 RQHEMAVWGVIQLANGIIVTGCADKTIKLHSE-EGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCV  153 (557)
Q Consensus        76 ~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~-~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~~  153 (557)
                      .-|..+-..+.|..+..+++.+.|+.|+|+.. ...++.++.+|.+.|.+|.|.|.+. |+++|.|++++||++....+.
T Consensus       315 ~~~s~~~lDVdW~~~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~  394 (524)
T KOG0273|consen  315 EFHSAPALDVDWQSNDEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSV  394 (524)
T ss_pred             eeccCCccceEEecCceEeecCCCceEEEEEecCCCcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCcch
Confidence            98998878899998889999999999999984 4578999999999999999999988 569999999999999999999


Q ss_pred             EEEeCCCCcEEEEEE-----------cCCEEEEEeCCCeEEEEECCCC---ceEeeCCccEEEEEEcCCCc-EEEEEcCC
Q psy7057         154 HTMYGHPNFIYSVAA-----------HGDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVAILPNSD-IVTGSSDG  218 (557)
Q Consensus       154 ~~~~~h~~~V~~l~~-----------~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg  218 (557)
                      ..+..|+..|+.+.|           .+..+++++.|++|++||....   ..+..|..+|++|+|+|+|+ +++|+.||
T Consensus       395 ~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~kH~~pVysvafS~~g~ylAsGs~dg  474 (524)
T KOG0273|consen  395 HDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMKHQEPVYSVAFSPNGRYLASGSLDG  474 (524)
T ss_pred             hhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeeccCCCceEEEEecCCCcEEEecCCCC
Confidence            999999999999988           2347999999999999997665   66778999999999999999 99999999


Q ss_pred             cEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecC
Q psy7057         219 IVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSAN  271 (557)
Q Consensus       219 ~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~  271 (557)
                      .|.+|+....+.....   ...+.+..+++.... ..+..+-+||.+++-++.
T Consensus       475 ~V~iws~~~~~l~~s~---~~~~~Ifel~Wn~~G-~kl~~~~sd~~vcvldlr  523 (524)
T KOG0273|consen  475 CVHIWSTKTGKLVKSY---QGTGGIFELCWNAAG-DKLGACASDGSVCVLDLR  523 (524)
T ss_pred             eeEeccccchheeEee---cCCCeEEEEEEcCCC-CEEEEEecCCCceEEEec
Confidence            9999999887654332   223446677776655 456777799999998753

>KOG0284|consensus

Probab=99.97  E-value=1.7e-30  Score=252.23  Aligned_cols=222  Identities=28%  Similarity=0.401  Sum_probs=203.8

Q ss_pred             EEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEECCC
Q psy7057           6 TALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCLES   68 (557)
Q Consensus         6 ~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~~~   68 (557)
                      ..++.|..+|+++.|+++|. ++||+.+|.|++|+.+-                ++++|+...+++||.|++|+|||...
T Consensus       132 tilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmnnVk~~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~  211 (464)
T KOG0284|consen  132 TILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNMNNVKIIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRM  211 (464)
T ss_pred             HHhhhhcccceeEEEccCCCEEEEcCCCceEEecccchhhhHHhhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccC
Confidence            34789999999999999999 99999999999998764                88899999999999999999999999


Q ss_pred             CeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEEEE
Q psy7057          69 QQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVW  145 (557)
Q Consensus        69 ~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vw  145 (557)
                      .+....|.+|.-.|.|+.|+|.. +|++||.|..|++|| .++.++.++.+|+..|..+.|.+++. |+++|.|..++++
T Consensus       212 ~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg~cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~  291 (464)
T KOG0284|consen  212 PKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSGSCLATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVF  291 (464)
T ss_pred             CchhheeccCCCCcceeccCCccceeEEccCCceeEeecCCCcchhhhhhhccceEEEEEEcCCCCeeEEccCCceEEEE
Confidence            88889999999999999999965 999999999999999 89999999999999999999999976 7799999999999


Q ss_pred             ECCCCeEEEEEeCCCCcEEEEEE---cCCEEEEEeCCCeEEEEECCCC----ceEeeCCccEEEEEEcCCCc-EEEEEcC
Q psy7057         146 DSTTGKCVHTMYGHPNFIYSVAA---HGDLITSGGEDQCVCVYQNKAQ----NSFMIPAMSVWAVAILPNSD-IVTGSSD  217 (557)
Q Consensus       146 d~~~~~~~~~~~~h~~~V~~l~~---~~~~l~s~s~Dg~I~iwd~~~~----~~~~~~~~~v~~v~~~p~g~-l~sg~~D  217 (557)
                      |+++.+.++++++|...|+++.|   ...+|.+|+.||.|..|.+...    ..-..|...|++++|+|-|. |++|+.|
T Consensus       292 DiR~mkEl~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~~v~~~~p~~~i~~AHd~~iwsl~~hPlGhil~tgsnd  371 (464)
T KOG0284|consen  292 DIRTMKELFTYRGHKKDVTSLTWHPLNESLFTSGGSDGSVVHWVVGLEEPLGEIPPAHDGEIWSLAYHPLGHILATGSND  371 (464)
T ss_pred             ehhHhHHHHHhhcchhhheeeccccccccceeeccCCCceEEEeccccccccCCCcccccceeeeeccccceeEeecCCC
Confidence            99999999999999999999998   5678999999999999996633    23345788999999999999 7899999


Q ss_pred             CcEEEEecCC
Q psy7057         218 GIVRVFSANP  227 (557)
Q Consensus       218 g~I~iwd~~~  227 (557)
                      .++|+|....
T Consensus       372 ~t~rfw~r~r  381 (464)
T KOG0284|consen  372 RTVRFWTRNR  381 (464)
T ss_pred             cceeeeccCC
Confidence            9999998654

>KOG0315|consensus

Probab=99.97  E-value=6.1e-29  Score=227.49  Aligned_cols=246  Identities=20%  Similarity=0.273  Sum_probs=207.1

Q ss_pred             EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEECCCCe--EEEEEcccCCcEEEEEE
Q psy7057          26 ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCLESQQ--CKLTIRQHEMAVWGVIQ   87 (557)
Q Consensus        26 l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~--~~~~l~~h~~~V~~l~~   87 (557)
                      |+|+|.|.+||+|...+                +...|++..|+++++- .||+||+++++  ++.++.+|...|.++.|
T Consensus        13 LvsA~YDhTIRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~~q-hvRlyD~~S~np~Pv~t~e~h~kNVtaVgF   91 (311)
T KOG0315|consen   13 LVSAGYDHTIRFWQALTGICSRTIQHPDSQVNRLEITPDKKDLAAAGNQ-HVRLYDLNSNNPNPVATFEGHTKNVTAVGF   91 (311)
T ss_pred             EEeccCcceeeeeehhcCeEEEEEecCccceeeEEEcCCcchhhhccCC-eeEEEEccCCCCCceeEEeccCCceEEEEE
Confidence            78999999999999876                6677788888888765 69999998874  68999999999999999


Q ss_pred             cCCC-EEEEEECCCeEEEEeCCCcEEEEEeCCCCCEEEEEEeCC-CeEEEEECCCeEEEEECCCCeEEEEEeC-CCCcEE
Q psy7057          88 LANG-IIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLND-TDFVSCSNDASIRVWDSTTGKCVHTMYG-HPNFIY  164 (557)
Q Consensus        88 ~~~~-~l~sgs~dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~-~~lvs~s~Dg~I~vwd~~~~~~~~~~~~-h~~~V~  164 (557)
                      ..+| .+.+||.||+++|||+..........|..+|+++..+|+ +.|++|..+|.|++||+....+.+.+.. ....|.
T Consensus        92 ~~dgrWMyTgseDgt~kIWdlR~~~~qR~~~~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~liPe~~~~i~  171 (311)
T KOG0315|consen   92 QCDGRWMYTGSEDGTVKIWDLRSLSCQRNYQHNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHELIPEDDTSIQ  171 (311)
T ss_pred             eecCeEEEecCCCceEEEEeccCcccchhccCCCCcceEEecCCcceEEeecCCCcEEEEEccCCccccccCCCCCccee
Confidence            9999 899999999999999666555556668899999999998 5699999999999999998877777653 346788


Q ss_pred             EEEE--cCCEEEEEeCCCeEEEEECCCC---------ceEeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcch
Q psy7057         165 SVAA--HGDLITSGGEDQCVCVYQNKAQ---------NSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAE  232 (557)
Q Consensus       165 ~l~~--~~~~l~s~s~Dg~I~iwd~~~~---------~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~  232 (557)
                      ++..  +|..++.+...|..++|++-..         ..++.|...+..+.++|+++ |+++|.|.+++||+.+.. ...
T Consensus       172 sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~-~kl  250 (311)
T KOG0315|consen  172 SLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDDF-FKL  250 (311)
T ss_pred             eEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecCCceEEEEecCCc-eee
Confidence            8887  8899999999999999994322         45677888999999999999 999999999999999877 222


Q ss_pred             hHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCCh
Q psy7057         233 DAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDR  274 (557)
Q Consensus       233 ~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~~  274 (557)
                      ...+..+...+....|..+.. +++++|+|+.+|+|++..++
T Consensus       251 e~~l~gh~rWvWdc~FS~dg~-YlvTassd~~~rlW~~~~~k  291 (311)
T KOG0315|consen  251 ELVLTGHQRWVWDCAFSADGE-YLVTASSDHTARLWDLSAGK  291 (311)
T ss_pred             EEEeecCCceEEeeeeccCcc-EEEecCCCCceeecccccCc
Confidence            334455666777777766655 69999999999999988764

>KOG0279|consensus

Probab=99.97  E-value=1e-28  Score=229.64  Aligned_cols=221  Identities=24%  Similarity=0.347  Sum_probs=189.0

Q ss_pred             EEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEEC
Q psy7057           4 LSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCL   66 (557)
Q Consensus         4 l~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~   66 (557)
                      .++.|.||+..|..++.++||. .+++|.|+++|+||+.+                ++++++...|++||.|++|++|+.
T Consensus        55 ~~r~~~GHsH~v~dv~~s~dg~~alS~swD~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt  134 (315)
T KOG0279|consen   55 PVRRLTGHSHFVSDVVLSSDGNFALSASWDGTLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNT  134 (315)
T ss_pred             eeeeeeccceEecceEEccCCceEEeccccceEEEEEecCCcEEEEEEecCCceEEEEecCCCceeecCCCcceeeeeee
Confidence            4788999999999999999999 77999999999999987                678889999999999999999997


Q ss_pred             CCCeEEEEEccc--CCcEEEEEEcCC--C-EEEEEECCCeEEEEeCCC-cEEEEEeCCCCCEEEEEEeCCCe-EEEEECC
Q psy7057          67 ESQQCKLTIRQH--EMAVWGVIQLAN--G-IIVTGCADKTIKLHSEEG-EFLKTLTGHTDCVRGLAVLNDTD-FVSCSND  139 (557)
Q Consensus        67 ~~~~~~~~l~~h--~~~V~~l~~~~~--~-~l~sgs~dg~I~vwd~~~-~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~D  139 (557)
                      .. .+..++..+  .+-|.|+.|+|.  . .|+++++|+++++||+.+ +....+.+|.+.++.+.++|||. +++|+.|
T Consensus       135 ~g-~ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh~~~v~t~~vSpDGslcasGgkd  213 (315)
T KOG0279|consen  135 LG-VCKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTTFIGHSGYVNTVTVSPDGSLCASGGKD  213 (315)
T ss_pred             cc-cEEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhhccccccccEEEEEECCCCCEEecCCCC
Confidence            65 556666544  789999999997  4 999999999999999654 55667889999999999999988 5599999


Q ss_pred             CeEEEEECCCCeEEEEEeCCCCcEEEEEEcCC-EEEEEeCCCeEEEEECCCCc---e----EeeC-----CccEEEEEEc
Q psy7057         140 ASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGD-LITSGGEDQCVCVYQNKAQN---S----FMIP-----AMSVWAVAIL  206 (557)
Q Consensus       140 g~I~vwd~~~~~~~~~~~~h~~~V~~l~~~~~-~l~s~s~Dg~I~iwd~~~~~---~----~~~~-----~~~v~~v~~~  206 (557)
                      |.+.+||++.++++.++. |...|.+++|.++ +.++...+..|+|||+.+..   .    ..++     .....+++|+
T Consensus       214 g~~~LwdL~~~k~lysl~-a~~~v~sl~fspnrywL~~at~~sIkIwdl~~~~~v~~l~~d~~g~s~~~~~~~clslaws  292 (315)
T KOG0279|consen  214 GEAMLWDLNEGKNLYSLE-AFDIVNSLCFSPNRYWLCAATATSIKIWDLESKAVVEELKLDGIGPSSKAGDPICLSLAWS  292 (315)
T ss_pred             ceEEEEEccCCceeEecc-CCCeEeeEEecCCceeEeeccCCceEEEeccchhhhhhccccccccccccCCcEEEEEEEc
Confidence            999999999999988875 8899999999655 66677777889999976552   1    1122     2245788999


Q ss_pred             CCCc-EEEEEcCCcEEEEecC
Q psy7057         207 PNSD-IVTGSSDGIVRVFSAN  226 (557)
Q Consensus       207 p~g~-l~sg~~Dg~I~iwd~~  226 (557)
                      ++|. |++|-.|+.||+|.+.
T Consensus       293 ~dG~tLf~g~td~~irv~qv~  313 (315)
T KOG0279|consen  293 ADGQTLFAGYTDNVIRVWQVA  313 (315)
T ss_pred             CCCcEEEeeecCCcEEEEEee
Confidence            9999 9999999999999874

>KOG0295|consensus

Probab=99.96  E-value=4.5e-29  Score=239.37  Aligned_cols=224  Identities=29%  Similarity=0.387  Sum_probs=203.5

Q ss_pred             cEEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC-----------------CCCCCCCCEEEEEECCCeEEE
Q psy7057           2 YKLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND-----------------LSPGAKVNTLLSASWDMTAKL   63 (557)
Q Consensus         2 ~kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~-----------------~~~~~~~~~l~sgs~Dg~i~i   63 (557)
                      +++.+.|+||++.|.+|+|+..|+ |+++|.|=.+++||...                 +.+-|.+++|++++.|.+|+.
T Consensus       140 g~~e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl~~~LWd~~~~~~c~ks~~gh~h~vS~V~f~P~gd~ilS~srD~tik~  219 (406)
T KOG0295|consen  140 GELERSLRGHTDSVFDISFDASGKYLATCSSDLSAKLWDFDTFFRCIKSLIGHEHGVSSVFFLPLGDHILSCSRDNTIKA  219 (406)
T ss_pred             hhhhhhhhccccceeEEEEecCccEEEecCCccchhheeHHHHHHHHHHhcCcccceeeEEEEecCCeeeecccccceeE
Confidence            466788999999999999999999 88999999999999887                 455577899999999999999


Q ss_pred             EECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCC-----------
Q psy7057          64 WCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLND-----------  130 (557)
Q Consensus        64 wd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~-----------  130 (557)
                      |++.++-++.++.+|..-|..+..+.|| ++++++.|.++++|- .++.+...++.|..+|-|++|.|.           
T Consensus       220 We~~tg~cv~t~~~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~  299 (406)
T KOG0295|consen  220 WECDTGYCVKTFPGHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQCKAELREHEHPVECIAWAPESSYPSISEATG  299 (406)
T ss_pred             EecccceeEEeccCchHhEEEEEecCCeeEEEecCCCceEEEEEeccchhhhhhhccccceEEEEecccccCcchhhccC
Confidence            9999999999999999999999999999 899999999999998 466678889999999999999652           


Q ss_pred             ----Ce-EEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC---ceEeeCCccE
Q psy7057         131 ----TD-FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSV  200 (557)
Q Consensus       131 ----~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v  200 (557)
                          +. +.++|.|++|++||+.++.|+.++.+|...|+.++|  .|++|+++.+|+++++||++..   ..+..|...+
T Consensus       300 ~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~ah~hfv  379 (406)
T KOG0295|consen  300 STNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVRGVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTLEAHEHFV  379 (406)
T ss_pred             CCCCccEEEeecccceEEEEeccCCeEEEEEecccceeeeeEEcCCCeEEEEEecCCcEEEEEeccceeeeccCCCccee
Confidence                13 569999999999999999999999999999999999  4899999999999999998766   5666788999


Q ss_pred             EEEEEcCCCc-EEEEEcCCcEEEEec
Q psy7057         201 WAVAILPNSD-IVTGSSDGIVRVFSA  225 (557)
Q Consensus       201 ~~v~~~p~g~-l~sg~~Dg~I~iwd~  225 (557)
                      .++.|+.+.. +++|+-|.++++|..
T Consensus       380 t~lDfh~~~p~VvTGsVdqt~KvwEc  405 (406)
T KOG0295|consen  380 TSLDFHKTAPYVVTGSVDQTVKVWEC  405 (406)
T ss_pred             EEEecCCCCceEEeccccceeeeeec
Confidence            9999998887 889999999999964

>KOG0316|consensus

Probab=99.96  E-value=2e-28  Score=222.45  Aligned_cols=245  Identities=18%  Similarity=0.192  Sum_probs=208.7

Q ss_pred             EEEeccCcccEEEEEEcCCCcEEEEECCCcEEEEcCCCCCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEE
Q psy7057           5 STALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWG   84 (557)
Q Consensus         5 ~~~l~gH~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~   84 (557)
                      .+.|.+|.++|+++.|+-|                         |++.++++.|++|++|++..+.+++++.+|...|..
T Consensus        10 ~~~l~~~qgaV~avryN~d-------------------------GnY~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD   64 (307)
T KOG0316|consen   10 LSILDCAQGAVRAVRYNVD-------------------------GNYCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLD   64 (307)
T ss_pred             ceeecccccceEEEEEccC-------------------------CCEEEEcCCCceEEeecccccceeeeecCCCceeee
Confidence            4678899999999999877                         678888888899999999999999999999999999


Q ss_pred             EEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEEEEECCC--CeEEEEEeCC
Q psy7057          85 VIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVWDSTT--GKCVHTMYGH  159 (557)
Q Consensus        85 l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~--~~~~~~~~~h  159 (557)
                      ++.+.++ .+++|+.|+.+.+|| .+|+.++.+.+|...|..+.|..+.. +++||.|.++++||.++  .++++.+...
T Consensus        65 ~~~s~Dnskf~s~GgDk~v~vwDV~TGkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea  144 (307)
T KOG0316|consen   65 AALSSDNSKFASCGGDKAVQVWDVNTGKVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEA  144 (307)
T ss_pred             ccccccccccccCCCCceEEEEEcccCeeeeecccccceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchhhhh
Confidence            9999888 999999999999999 78999999999999999999998866 66999999999999875  5688988888


Q ss_pred             CCcEEEEEEcCCEEEEEeCCCeEEEEECCCCce-EeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHh
Q psy7057         160 PNFIYSVAAHGDLITSGGEDQCVCVYQNKAQNS-FMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQA  237 (557)
Q Consensus       160 ~~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~~~~-~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~  237 (557)
                      .+.|.++...+..+++||.||++|.||++..+. ......+|++++|++++. .++++.|+++|+.|-.+++.+....  
T Consensus       145 ~D~V~Si~v~~heIvaGS~DGtvRtydiR~G~l~sDy~g~pit~vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYk--  222 (307)
T KOG0316|consen  145 KDGVSSIDVAEHEIVAGSVDGTVRTYDIRKGTLSSDYFGHPITSVSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYK--  222 (307)
T ss_pred             cCceeEEEecccEEEeeccCCcEEEEEeecceeehhhcCCcceeEEecCCCCEEEEeeccceeeecccchhHHHHHhc--
Confidence            999999999999999999999999999988743 344567999999999999 8899999999999999988764433  


Q ss_pred             cccceeEEE-eccCCCceeEEEEeCCCcEEEEecCCChhh
Q psy7057         238 QYAEEVKKL-KSANEQEIGGVKVSDDGIVRVFSANPDRQA  276 (557)
Q Consensus       238 ~~~~~v~~l-~~~~~~~~~~vs~s~DG~IrvW~~~~~~~~  276 (557)
                      +|...-..+ +.........++||.||.|.+|++..+.++
T Consensus       223 Ghkn~eykldc~l~qsdthV~sgSEDG~Vy~wdLvd~~~~  262 (307)
T KOG0316|consen  223 GHKNMEYKLDCCLNQSDTHVFSGSEDGKVYFWDLVDETQI  262 (307)
T ss_pred             ccccceeeeeeeecccceeEEeccCCceEEEEEeccceee
Confidence            333222222 223333445789999999999998866444

>KOG0263|consensus

Probab=99.96  E-value=4.7e-29  Score=260.50  Aligned_cols=186  Identities=31%  Similarity=0.484  Sum_probs=176.6

Q ss_pred             EEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEECC
Q psy7057           5 STALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCLE   67 (557)
Q Consensus         5 ~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~~   67 (557)
                      .++|.||+++|..+.|+|+.+ |+++|.|++||+|.+.+                +.++|.|-+++|||.|++.++|...
T Consensus       444 ~~~L~GH~GPVyg~sFsPd~rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~d  523 (707)
T KOG0263|consen  444 SRTLYGHSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFATASHDQTARLWSTD  523 (707)
T ss_pred             eEEeecCCCceeeeeecccccceeeccCCcceeeeecccceeEEEecCCCcceeeEEecCCceEEEecCCCceeeeeecc
Confidence            467999999999999999999 88999999999999987                5677899999999999999999999


Q ss_pred             CCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEEE
Q psy7057          68 SQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRV  144 (557)
Q Consensus        68 ~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~v  144 (557)
                      ...+++.+.+|-..|.|+.|+|+. ++++||.|.++|+|| .+|..++.+.||.++|.+++++|+|+ |++|+.|+.|++
T Consensus       524 ~~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~i  603 (707)
T KOG0263|consen  524 HNKPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYLASGDEDGLIKI  603 (707)
T ss_pred             cCCchhhhcccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCceEeecccCCcEEE
Confidence            999999999999999999999988 999999999999999 78999999999999999999999998 669999999999


Q ss_pred             EECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC
Q psy7057         145 WDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ  190 (557)
Q Consensus       145 wd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~  190 (557)
                      ||+.+++.+..+.+|++.|.+|.|  +|..|++|+.|.+|++||+...
T Consensus       604 WDl~~~~~v~~l~~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~~  651 (707)
T KOG0263|consen  604 WDLANGSLVKQLKGHTGTIYSLSFSRDGNVLASGGADNSVRLWDLTKV  651 (707)
T ss_pred             EEcCCCcchhhhhcccCceeEEEEecCCCEEEecCCCCeEEEEEchhh
Confidence            999999999999999999999999  8999999999999999996543

>KOG0282|consensus

Probab=99.96  E-value=3.8e-29  Score=247.79  Aligned_cols=264  Identities=21%  Similarity=0.333  Sum_probs=226.0

Q ss_pred             EEEEEeccCcccEEEEEEcC-CCc-EEEEECCCcEEEEcCCC-----------------CCCCCCCCEEEEEECCCeEEE
Q psy7057           3 KLSTALYGHSMDVRSLSVTP-DGC-ILSASRDKSAKLWKPND-----------------LSPGAKVNTLLSASWDMTAKL   63 (557)
Q Consensus         3 kl~~~l~gH~~~V~~l~~sp-dg~-l~sgs~Dg~V~iWd~~~-----------------~~~~~~~~~l~sgs~Dg~i~i   63 (557)
                      +++.++.||+..|+++.|.| .+. |++++.|+.|+||++..                 ++++..+..++|+|.|+.+++
T Consensus       205 k~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKl  284 (503)
T KOG0282|consen  205 KLSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKL  284 (503)
T ss_pred             hheeeccCCccccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecceeeee
Confidence            46789999999999999999 667 78999999999999865                 788999999999999999999


Q ss_pred             EECCCCeEEEEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECC
Q psy7057          64 WCLESQQCKLTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSND  139 (557)
Q Consensus        64 wd~~~~~~~~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~D  139 (557)
                      ||+++|+++..+. -...+.|+.|.|++  .+++|+.|+.|+.|| .+++.++.+..|-++|..+.|.+++. |++++.|
T Consensus       285 wDtETG~~~~~f~-~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~~g~rFissSDd  363 (503)
T KOG0282|consen  285 WDTETGQVLSRFH-LDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILDITFVDEGRRFISSSDD  363 (503)
T ss_pred             eccccceEEEEEe-cCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhhheeeeEEccCCceEeeeccC
Confidence            9999999999886 35678899999987  899999999999999 67788888889999999999999976 9999999


Q ss_pred             CeEEEEECCCCeEEEEEe---CCCCcEEEEEEcCCEEEEEeCCCeEEEEECCCC------ceEeeCCc--cEEEEEEcCC
Q psy7057         140 ASIRVWDSTTGKCVHTMY---GHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQ------NSFMIPAM--SVWAVAILPN  208 (557)
Q Consensus       140 g~I~vwd~~~~~~~~~~~---~h~~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~~------~~~~~~~~--~v~~v~~~p~  208 (557)
                      ++++||+.+.+-.+....   .|+-+...+...+.++++-+.|..|.+|.+...      +.+.+|..  .-..|.||||
T Consensus       364 ks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpD  443 (503)
T KOG0282|consen  364 KSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPD  443 (503)
T ss_pred             ccEEEEEcCCCccchhhcchhhccCcceecCCCCCeehhhccCceEEEEecccccccCHhhhhcceeccCceeeEEEcCC
Confidence            999999988776655433   344444444447889999999999999984432      55566643  4567889999


Q ss_pred             Cc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEe
Q psy7057         209 SD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFS  269 (557)
Q Consensus       209 g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~  269 (557)
                      |. |++|..||.+.+||.++.+..  .....|...+..+.+.+.....++||+.||.|++|+
T Consensus       444 G~~l~SGdsdG~v~~wdwkt~kl~--~~lkah~~~ci~v~wHP~e~Skvat~~w~G~Ikiwd  503 (503)
T KOG0282|consen  444 GRTLCSGDSDGKVNFWDWKTTKLV--SKLKAHDQPCIGVDWHPVEPSKVATCGWDGLIKIWD  503 (503)
T ss_pred             CCeEEeecCCccEEEeechhhhhh--hccccCCcceEEEEecCCCcceeEecccCceeEecC
Confidence            99 889999999999999987654  345567888999999999999999999999999995

>KOG0313|consensus

Probab=99.96  E-value=3.2e-28  Score=234.71  Aligned_cols=257  Identities=24%  Similarity=0.287  Sum_probs=213.2

Q ss_pred             cCcccEEEEEEcCCCcEEEEECCCcEEEEcCCC------------------CCCCCCCCEEEEEECCCeEEEEECCCCeE
Q psy7057          10 GHSMDVRSLSVTPDGCILSASRDKSAKLWKPND------------------LSPGAKVNTLLSASWDMTAKLWCLESQQC   71 (557)
Q Consensus        10 gH~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~------------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~   71 (557)
                      -|.+.|.++... .+.++||+.||++++||...                  +..++....+++++.|.++++|.++.++.
T Consensus       103 ~hdDWVSsv~~~-~~~IltgsYDg~~riWd~~Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~  181 (423)
T KOG0313|consen  103 LHDDWVSSVKGA-SKWILTGSYDGTSRIWDLKGKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGEN  181 (423)
T ss_pred             cchhhhhhhccc-CceEEEeecCCeeEEEecCCceEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCchh
Confidence            377888888777 33499999999999999887                  22334445799999999999999887753


Q ss_pred             ----EEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCC--------------------------CcEEEEEeCCCC
Q psy7057          72 ----KLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEE--------------------------GEFLKTLTGHTD  120 (557)
Q Consensus        72 ----~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~--------------------------~~~~~~l~~h~~  120 (557)
                          +..-.||+..|-++...+++ .+++||+|.+|+||+..                          ..++.++.+|..
T Consensus       182 ~~~~~~~~~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~  261 (423)
T KOG0313|consen  182 KVKALKVCRGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTE  261 (423)
T ss_pred             hhhHHhHhcccccceeEEEecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEeccccc
Confidence                23345999999999999998 99999999999999811                          234667889999


Q ss_pred             CEEEEEEeCCCeEEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC------ce
Q psy7057         121 CVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ------NS  192 (557)
Q Consensus       121 ~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~------~~  192 (557)
                      +|.++.|++.+.++++|+|.+|+.||+.++.++.++.+ ...+.|++.  ..++|++|+.|..|++||.+..      ++
T Consensus       262 ~Vs~V~w~d~~v~yS~SwDHTIk~WDletg~~~~~~~~-~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s  340 (423)
T KOG0313|consen  262 PVSSVVWSDATVIYSVSWDHTIKVWDLETGGLKSTLTT-NKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQS  340 (423)
T ss_pred             ceeeEEEcCCCceEeecccceEEEEEeecccceeeeec-CcceeEeecccccceeeecCCCCceeecCCCCCCCceeEEe
Confidence            99999999988899999999999999999999988874 567788888  5568999999999999997654      77


Q ss_pred             EeeCCccEEEEEEcCCCc--EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEec
Q psy7057         193 FMIPAMSVWAVAILPNSD--IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSA  270 (557)
Q Consensus       193 ~~~~~~~v~~v~~~p~g~--l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~  270 (557)
                      +.+|...|.++.|+|...  |++++.|+++++||+++..- +......|...+.++.+..  ...+++|+.|.+|||+..
T Consensus       341 ~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~-plydI~~h~DKvl~vdW~~--~~~IvSGGaD~~l~i~~~  417 (423)
T KOG0313|consen  341 LIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKA-PLYDIAGHNDKVLSVDWNE--GGLIVSGGADNKLRIFKG  417 (423)
T ss_pred             eecchhhhhheecCCCCceEEEEEecCCeEEEEEeccCCC-cceeeccCCceEEEEeccC--CceEEeccCcceEEEecc
Confidence            889999999999999887  89999999999999997662 2344556677777777654  346799999999999975


Q ss_pred             C
Q psy7057         271 N  271 (557)
Q Consensus       271 ~  271 (557)
                      .
T Consensus       418 ~  418 (423)
T KOG0313|consen  418 S  418 (423)
T ss_pred             c
Confidence            4

>KOG0293|consensus

Probab=99.96  E-value=9.1e-29  Score=240.32  Aligned_cols=268  Identities=20%  Similarity=0.252  Sum_probs=225.4

Q ss_pred             EEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC-------------------CCCCCCCCEEEEEECCCeEE
Q psy7057           3 KLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND-------------------LSPGAKVNTLLSASWDMTAK   62 (557)
Q Consensus         3 kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~-------------------~~~~~~~~~l~sgs~Dg~i~   62 (557)
                      +-.+.|..|++.|+-+.||++|+ |||+|.|.+..+|.+..                   +.++|+.++|++|+.|..++
T Consensus       215 qt~qil~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~  294 (519)
T KOG0293|consen  215 QTWQILQDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLS  294 (519)
T ss_pred             hhhhhHhhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchHhee
Confidence            34567899999999999999999 99999999999998754                   78899999999999999999


Q ss_pred             EEECCCCeEEEEEc-ccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcEEEEEeCCC-CCEEEEEEeCCCe-EEEEEC
Q psy7057          63 LWCLESQQCKLTIR-QHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFLKTLTGHT-DCVRGLAVLNDTD-FVSCSN  138 (557)
Q Consensus        63 iwd~~~~~~~~~l~-~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~~~l~~h~-~~V~~l~~~~~~~-lvs~s~  138 (557)
                      +||..+|.+.+.+. +|...+.+++|.||| .+++|+.|++|..||.+|+.+...++-. ..|.++++.++|+ +++.+.
T Consensus       295 lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlDgn~~~~W~gvr~~~v~dlait~Dgk~vl~v~~  374 (519)
T KOG0293|consen  295 LWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLDGNILGNWEGVRDPKVHDLAITYDGKYVLLVTV  374 (519)
T ss_pred             eccCCcchhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEEecCCcchhhcccccccceeEEEEEcCCCcEEEEEec
Confidence            99999998877764 346889999999999 9999999999999999999887777644 5699999999988 668889


Q ss_pred             CCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC---ceEeeCCcc--EEEEEEcCCC-c
Q psy7057         139 DASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ---NSFMIPAMS--VWAVAILPNS-D  210 (557)
Q Consensus       139 Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~--v~~v~~~p~g-~  210 (557)
                      |..|++++..+......+. ...+|++++.  +++++++.-.+..+++||+...   +.+.+|...  +-.-||--.. .
T Consensus       375 d~~i~l~~~e~~~dr~lis-e~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~~~~  453 (519)
T KOG0293|consen  375 DKKIRLYNREARVDRGLIS-EEQPITSFSISKDGKLALVNLQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFGGGNDK  453 (519)
T ss_pred             ccceeeechhhhhhhcccc-ccCceeEEEEcCCCcEEEEEcccCeeEEeecchhhHHHHhhcccccceEEEeccCCCCcc
Confidence            9999999977655544333 4567888888  7778888889999999998865   556666543  4444554433 3


Q ss_pred             -EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCC
Q psy7057         211 -IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPD  273 (557)
Q Consensus       211 -l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~  273 (557)
                       +++|++|+.|+||+..++.+.  ..+.+|...+..+.+.|.++..++++|.||+||||...+.
T Consensus       454 fiaSGSED~kvyIWhr~sgkll--~~LsGHs~~vNcVswNP~~p~m~ASasDDgtIRIWg~~~~  515 (519)
T KOG0293|consen  454 FIASGSEDSKVYIWHRISGKLL--AVLSGHSKTVNCVSWNPADPEMFASASDDGTIRIWGPSDN  515 (519)
T ss_pred             eEEecCCCceEEEEEccCCcee--EeecCCcceeeEEecCCCCHHHhhccCCCCeEEEecCCcc
Confidence             789999999999999988875  4567888999999999999999999999999999987654

>KOG0319|consensus

Probab=99.96  E-value=3.4e-28  Score=251.59  Aligned_cols=222  Identities=30%  Similarity=0.485  Sum_probs=195.0

Q ss_pred             EeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC--------------------CCC-CCCCCEEEEEECCCeEEEE
Q psy7057           7 ALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND--------------------LSP-GAKVNTLLSASWDMTAKLW   64 (557)
Q Consensus         7 ~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~--------------------~~~-~~~~~~l~sgs~Dg~i~iw   64 (557)
                      .+.||++.|.++....+|. |+|||.|+++++|.+++                    ++. .....+++++|.|+++++|
T Consensus       360 ii~GH~e~vlSL~~~~~g~llat~sKD~svilWr~~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W  439 (775)
T KOG0319|consen  360 IIPGHTEAVLSLDVWSSGDLLATGSKDKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLW  439 (775)
T ss_pred             EEeCchhheeeeeecccCcEEEEecCCceEEEEEecCCcchhhhhhhhcccccccceeeecccCccEEEEecCCceEEEe
Confidence            6789999999999777775 88999999999998844                    111 1234689999999999999


Q ss_pred             ECCCCe-----EEE----EEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe-
Q psy7057          65 CLESQQ-----CKL----TIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD-  132 (557)
Q Consensus        65 d~~~~~-----~~~----~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~-  132 (557)
                      ++...+     ...    +...|...|+|++.+|+. +|+|||.|++.+||+ .......++.+|+..|+|+.|++..+ 
T Consensus       440 ~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~~l~~vLsGH~RGvw~V~Fs~~dq~  519 (775)
T KOG0319|consen  440 DLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQLRLLGVLSGHTRGVWCVSFSKNDQL  519 (775)
T ss_pred             cCCCcccccccceehhhHHHHhhcccccceEecCCCceEEecccccceeeecccCceEEEEeeCCccceEEEEeccccce
Confidence            987622     112    345699999999999977 999999999999999 55677899999999999999999876 


Q ss_pred             EEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC---ceEeeCCccEEEEEEcC
Q psy7057         133 FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVAILP  207 (557)
Q Consensus       133 lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p  207 (557)
                      ++|+|.|++|+||.+.+..|+.+|.||...|..+.|  ++..|+||+.||.|++|+.++.   .++..|...||+++.+|
T Consensus       520 laT~SgD~TvKIW~is~fSClkT~eGH~~aVlra~F~~~~~qliS~~adGliKlWnikt~eC~~tlD~H~DrvWaL~~~~  599 (775)
T KOG0319|consen  520 LATCSGDKTVKIWSISTFSCLKTFEGHTSAVLRASFIRNGKQLISAGADGLIKLWNIKTNECEMTLDAHNDRVWALSVSP  599 (775)
T ss_pred             eEeccCCceEEEEEeccceeeeeecCccceeEeeeeeeCCcEEEeccCCCcEEEEeccchhhhhhhhhccceeEEEeecC
Confidence            679999999999999999999999999999999999  8889999999999999997665   88899999999999999


Q ss_pred             CCc-EEEEEcCCcEEEEecCCC
Q psy7057         208 NSD-IVTGSSDGIVRVFSANPD  228 (557)
Q Consensus       208 ~g~-l~sg~~Dg~I~iwd~~~~  228 (557)
                      ... +++|+.||.|.+|.-.+.
T Consensus       600 ~~~~~~tgg~Dg~i~~wkD~Te  621 (775)
T KOG0319|consen  600 LLDMFVTGGGDGRIIFWKDVTE  621 (775)
T ss_pred             ccceeEecCCCeEEEEeecCcH
Confidence            998 889999999999986654

>KOG0285|consensus

Probab=99.96  E-value=4.9e-28  Score=231.48  Aligned_cols=229  Identities=22%  Similarity=0.302  Sum_probs=198.0

Q ss_pred             CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeC-CCcEEEEEeCCCC
Q psy7057          43 LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSE-EGEFLKTLTGHTD  120 (557)
Q Consensus        43 ~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~-~~~~~~~l~~h~~  120 (557)
                      +++.|....+++|+.|++++|||+.+++...++.+|...|..+++++.. ++++++.|+.|+.||+ ..+.++.+.+|-+
T Consensus       157 vavdP~n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwDLe~nkvIR~YhGHlS  236 (460)
T KOG0285|consen  157 VAVDPGNEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWDLEYNKVIRHYHGHLS  236 (460)
T ss_pred             EeeCCCceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecCCCeeEEEechhhhhHHHhccccc
Confidence            5667788999999999999999999999999999999999999999977 9999999999999995 5567889999999


Q ss_pred             CEEEEEEeCC-CeEEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCeEEEEECCCC---ceEe
Q psy7057         121 CVRGLAVLND-TDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAH--GDLITSGGEDQCVCVYQNKAQ---NSFM  194 (557)
Q Consensus       121 ~V~~l~~~~~-~~lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~~--~~~l~s~s~Dg~I~iwd~~~~---~~~~  194 (557)
                      .|.|++.+|. ..+++|+.|.++|+||+++...+.++.+|...|.++.+.  ...+++||.|++|++||++..   ..+.
T Consensus       237 ~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~GH~~~V~~V~~~~~dpqvit~S~D~tvrlWDl~agkt~~tlt  316 (460)
T KOG0285|consen  237 GVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLSGHTNPVASVMCQPTDPQVITGSHDSTVRLWDLRAGKTMITLT  316 (460)
T ss_pred             eeEEEeccccceeEEecCCcceEEEeeecccceEEEecCCCCcceeEEeecCCCceEEecCCceEEEeeeccCceeEeee
Confidence            9999999998 458899999999999999999999999999999999984  456999999999999998766   5667


Q ss_pred             eCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCC
Q psy7057         195 IPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPD  273 (557)
Q Consensus       195 ~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~  273 (557)
                      .|...|++++.+|... |++++.|. |+-|++..+.....  ..++...+..+....++  .+++|+..|.+..|+...+
T Consensus       317 ~hkksvral~lhP~e~~fASas~dn-ik~w~~p~g~f~~n--lsgh~~iintl~~nsD~--v~~~G~dng~~~fwdwksg  391 (460)
T KOG0285|consen  317 HHKKSVRALCLHPKENLFASASPDN-IKQWKLPEGEFLQN--LSGHNAIINTLSVNSDG--VLVSGGDNGSIMFWDWKSG  391 (460)
T ss_pred             cccceeeEEecCCchhhhhccCCcc-ceeccCCccchhhc--cccccceeeeeeeccCc--eEEEcCCceEEEEEecCcC
Confidence            7888999999999987 66666665 99999987765433  45566666666554333  5799999999999999887


Q ss_pred             hhh
Q psy7057         274 RQA  276 (557)
Q Consensus       274 ~~~  276 (557)
                      ...
T Consensus       392 ~ny  394 (460)
T KOG0285|consen  392 HNY  394 (460)
T ss_pred             ccc
Confidence            544

>KOG0277|consensus

Probab=99.96  E-value=1.4e-27  Score=219.15  Aligned_cols=254  Identities=20%  Similarity=0.246  Sum_probs=211.0

Q ss_pred             EEEEEcC--CCcEE--EE-----ECCCcEEEEcCCC------------------CCCCCC-CCEEEEEECCCeEEEEECC
Q psy7057          16 RSLSVTP--DGCIL--SA-----SRDKSAKLWKPND------------------LSPGAK-VNTLLSASWDMTAKLWCLE   67 (557)
Q Consensus        16 ~~l~~sp--dg~l~--sg-----s~Dg~V~iWd~~~------------------~~~~~~-~~~l~sgs~Dg~i~iwd~~   67 (557)
                      .++.|||  +++|+  ++     ...|++.|-++..                  +++++. .+.+++++.||+++|||+.
T Consensus        12 ysvqfSPf~~nrLavAt~q~yGl~G~G~L~ile~~~~~gi~e~~s~d~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~   91 (311)
T KOG0277|consen   12 YSVQFSPFVENRLAVATAQHYGLAGNGRLFILEVTDPKGIQECQSYDTEDGLFDVAWSENHENQVIAASGDGSLRLFDLT   91 (311)
T ss_pred             ceeEecccccchhheeehhhcccccCceEEEEecCCCCCeEEEEeeecccceeEeeecCCCcceEEEEecCceEEEeccC
Confidence            4688998  45544  33     3578888888753                  444443 4678999999999999964


Q ss_pred             C-CeEEEEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCC--CeEEEEECCCe
Q psy7057          68 S-QQCKLTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLND--TDFVSCSNDAS  141 (557)
Q Consensus        68 ~-~~~~~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~--~~lvs~s~Dg~  141 (557)
                      . ..++..++.|+..|.++.|++..  .++++|+|++|++|+ ...+.+.++.+|...|....|+|.  +.|+++|.|++
T Consensus        92 ~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~  171 (311)
T KOG0277|consen   92 MPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGT  171 (311)
T ss_pred             CCCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCcceEeecCCccEEEEEecCCCCCCeEEEccCCce
Confidence            3 35889999999999999999844  788889999999999 567789999999999999999997  55889999999


Q ss_pred             EEEEECCCCeEEEEEeCCCCcEEEEEE---cCCEEEEEeCCCeEEEEECCCC----ceEeeCCccEEEEEEcCCCc--EE
Q psy7057         142 IRVWDSTTGKCVHTMYGHPNFIYSVAA---HGDLITSGGEDQCVCVYQNKAQ----NSFMIPAMSVWAVAILPNSD--IV  212 (557)
Q Consensus       142 I~vwd~~~~~~~~~~~~h~~~V~~l~~---~~~~l~s~s~Dg~I~iwd~~~~----~~~~~~~~~v~~v~~~p~g~--l~  212 (557)
                      +++||++..-....+..|...+.|+.|   +...+++|+.|+.||.||++..    ..+.+|.-.|+.|.|+|...  |+
T Consensus       172 l~lwdvr~~gk~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL~gh~~AVRkvk~Sph~~~lLa  251 (311)
T KOG0277|consen  172 LRLWDVRSPGKFMSIEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRTPLFELNGHGLAVRKVKFSPHHASLLA  251 (311)
T ss_pred             EEEEEecCCCceeEEEeccceeEeecccccCCcEEEecCCCceEEEEehhhccccceeecCCceEEEEEecCcchhhHhh
Confidence            999999865444448899999999999   6678999999999999997765    56788999999999999877  88


Q ss_pred             EEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEec
Q psy7057         213 TGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSA  270 (557)
Q Consensus       213 sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~  270 (557)
                      +++.|=++|||+....... ......|.+-+..+.+....+..+++++-|+.+.||+-
T Consensus       252 SasYDmT~riw~~~~~ds~-~e~~~~HtEFv~g~Dws~~~~~~vAs~gWDe~l~Vw~p  308 (311)
T KOG0277|consen  252 SASYDMTVRIWDPERQDSA-IETVDHHTEFVCGLDWSLFDPGQVASTGWDELLYVWNP  308 (311)
T ss_pred             hccccceEEecccccchhh-hhhhhccceEEeccccccccCceeeecccccceeeecc
Confidence            9999999999998754332 34455677888888888888888899999999999973

>KOG0281|consensus

Probab=99.96  E-value=4.9e-29  Score=237.34  Aligned_cols=218  Identities=24%  Similarity=0.331  Sum_probs=190.0

Q ss_pred             CCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCCEEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEE
Q psy7057          48 KVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLA  126 (557)
Q Consensus        48 ~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~  126 (557)
                      +...+++|..|.+|+|||.++..++..+.||++.|.|+.|.. ..|++||.|.+|++|| .+++++.++.+|...|..+.
T Consensus       206 DD~kiVSGlrDnTikiWD~n~~~c~~~L~GHtGSVLCLqyd~-rviisGSSDsTvrvWDv~tge~l~tlihHceaVLhlr  284 (499)
T KOG0281|consen  206 DDEKIVSGLRDNTIKIWDKNSLECLKILTGHTGSVLCLQYDE-RVIVSGSSDSTVRVWDVNTGEPLNTLIHHCEAVLHLR  284 (499)
T ss_pred             cchhhhcccccCceEEeccccHHHHHhhhcCCCcEEeeeccc-eEEEecCCCceEEEEeccCCchhhHHhhhcceeEEEE
Confidence            357799999999999999999999999999999999999864 3999999999999999 78999999999999999999


Q ss_pred             EeCCCeEEEEECCCeEEEEECCCCe---EEEEEeCCCCcEEEEEEcCCEEEEEeCCCeEEEEECCCC---ceEeeCCccE
Q psy7057         127 VLNDTDFVSCSNDASIRVWDSTTGK---CVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSV  200 (557)
Q Consensus       127 ~~~~~~lvs~s~Dg~I~vwd~~~~~---~~~~~~~h~~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v  200 (557)
                      |+ +|.++++|.|.+|.+||+....   +.+.+.||.+.|..+.|+.++++++|.|.+|++|++.++   +++.+|...|
T Consensus       285 f~-ng~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd~kyIVsASgDRTikvW~~st~efvRtl~gHkRGI  363 (499)
T KOG0281|consen  285 FS-NGYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI  363 (499)
T ss_pred             Ee-CCEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccccceEEEecCCceEEEEeccceeeehhhhcccccc
Confidence            97 5789999999999999997654   445678999999999999999999999999999998887   6777888888


Q ss_pred             EEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCCh
Q psy7057         201 WAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDR  274 (557)
Q Consensus       201 ~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~~  274 (557)
                      -|+.+  .++ +++|++|.+||+||+..+..+  ..+.+|.+-+..+.+..   ..+++|+.||+|+||++....
T Consensus       364 AClQY--r~rlvVSGSSDntIRlwdi~~G~cL--RvLeGHEeLvRciRFd~---krIVSGaYDGkikvWdl~aal  431 (499)
T KOG0281|consen  364 ACLQY--RDRLVVSGSSDNTIRLWDIECGACL--RVLEGHEELVRCIRFDN---KRIVSGAYDGKIKVWDLQAAL  431 (499)
T ss_pred             eehhc--cCeEEEecCCCceEEEEeccccHHH--HHHhchHHhhhheeecC---ceeeeccccceEEEEeccccc
Confidence            77766  456 789999999999999988654  45667777777776643   357999999999999987653

>KOG0292|consensus

Probab=99.96  E-value=2.4e-27  Score=248.65  Aligned_cols=267  Identities=24%  Similarity=0.314  Sum_probs=223.6

Q ss_pred             EEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEECCC
Q psy7057           6 TALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCLES   68 (557)
Q Consensus         6 ~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~~~   68 (557)
                      ..+..-+..|..++|+|..- ++++-..|.|++||.+-                +.+++...+++||+.|-+|++|+..+
T Consensus         3 tkfEskSsRvKglsFHP~rPwILtslHsG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~   82 (1202)
T KOG0292|consen    3 TKFESKSSRVKGLSFHPKRPWILTSLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKT   82 (1202)
T ss_pred             chhhcccccccceecCCCCCEEEEeecCceeeeehhhhhhHHhhhhccCCccceeeecCCCCeEEecCCccEEEEEeccc
Confidence            34566778999999999877 88999999999999764                78999999999999999999999999


Q ss_pred             CeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCC-CeEEEEECCCeEEEE
Q psy7057          69 QQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLND-TDFVSCSNDASIRVW  145 (557)
Q Consensus        69 ~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~-~~lvs~s~Dg~I~vw  145 (557)
                      .+|+.++.+|-+.|..+.|++.- .|+|+|.|.+|+||+ .+.+++..+.||...|.|..|+|. ..++|+|-|.+||+|
T Consensus        83 rrclftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhptEDlIVSaSLDQTVRVW  162 (1202)
T KOG0292|consen   83 RRCLFTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTVRVW  162 (1202)
T ss_pred             ceehhhhccccceeEEeeccCCCceEEEccCCCeEEEEeccCCceEEEEecCceEEEeeccCCccceEEEecccceEEEE
Confidence            99999999999999999999987 999999999999999 788999999999999999999995 568899999999999


Q ss_pred             ECCC--------C-------------------e--EEEEEeCCCCcEEEEEEcC--CEEEEEeCCCeEEEEECCCC----
Q psy7057         146 DSTT--------G-------------------K--CVHTMYGHPNFIYSVAAHG--DLITSGGEDQCVCVYQNKAQ----  190 (557)
Q Consensus       146 d~~~--------~-------------------~--~~~~~~~h~~~V~~l~~~~--~~l~s~s~Dg~I~iwd~~~~----  190 (557)
                      |+..        +                   .  ..+.+.||...|..++|++  ..++||+.|+.|++|.....    
T Consensus       163 DisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmnetKaWE  242 (1202)
T KOG0292|consen  163 DISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWE  242 (1202)
T ss_pred             eecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEEecccccee
Confidence            9852        1                   0  1245679999999999988  58999999999999996544    


Q ss_pred             -ceEeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEE
Q psy7057         191 -NSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVF  268 (557)
Q Consensus       191 -~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW  268 (557)
                       .+..+|...|.++-|+|... +++.|+|++|||||+...........  -.+..+.+...|.-  .+.+++.|+-+.||
T Consensus       243 vDtcrgH~nnVssvlfhp~q~lIlSnsEDksirVwDm~kRt~v~tfrr--endRFW~laahP~l--NLfAAgHDsGm~VF  318 (1202)
T KOG0292|consen  243 VDTCRGHYNNVSSVLFHPHQDLILSNSEDKSIRVWDMTKRTSVQTFRR--ENDRFWILAAHPEL--NLFAAGHDSGMIVF  318 (1202)
T ss_pred             ehhhhcccCCcceEEecCccceeEecCCCccEEEEecccccceeeeec--cCCeEEEEEecCCc--ceeeeecCCceEEE
Confidence             56788999999999999887 88999999999999986554332222  12334444444332  35677788888888


Q ss_pred             ecCCChhh
Q psy7057         269 SANPDRQA  276 (557)
Q Consensus       269 ~~~~~~~~  276 (557)
                      .++.+|.+
T Consensus       319 kleRErpa  326 (1202)
T KOG0292|consen  319 KLERERPA  326 (1202)
T ss_pred             EEcccCce
Confidence            88766653

>KOG0318|consensus

Probab=99.95  E-value=6.4e-26  Score=226.70  Aligned_cols=268  Identities=21%  Similarity=0.304  Sum_probs=210.6

Q ss_pred             CcEEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC-------------------CCCCCCCCEEEEEECCCe
Q psy7057           1 MYKLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND-------------------LSPGAKVNTLLSASWDMT   60 (557)
Q Consensus         1 ~~kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~-------------------~~~~~~~~~l~sgs~Dg~   60 (557)
                      .||...+++.|+.-|+|+.|+|||. ++|++.||+|.+||=.+                   ++|+|++..++++|.|.+
T Consensus       179 PFKFk~s~r~HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt  258 (603)
T KOG0318|consen  179 PFKFKSSFREHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKT  258 (603)
T ss_pred             CeeeeecccccccceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCce
Confidence            4888899999999999999999998 88999999999998665                   788999999999999999


Q ss_pred             EEEEECCCCeE-------------------------------------------EEEEcccCCcEEEEEEcCCC-EEEEE
Q psy7057          61 AKLWCLESQQC-------------------------------------------KLTIRQHEMAVWGVIQLANG-IIVTG   96 (557)
Q Consensus        61 i~iwd~~~~~~-------------------------------------------~~~l~~h~~~V~~l~~~~~~-~l~sg   96 (557)
                      ++|||+.+.++                                           +..+.+|...|+++..++++ .|++|
T Consensus       259 ~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~Sg  338 (603)
T KOG0318|consen  259 IKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSG  338 (603)
T ss_pred             EEEEEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEEEee
Confidence            99999876432                                           23456799999999999999 99999


Q ss_pred             ECCCeEEEEeCC-CcEEEEE-eCCCC------------------------------------------------------
Q psy7057          97 CADKTIKLHSEE-GEFLKTL-TGHTD------------------------------------------------------  120 (557)
Q Consensus        97 s~dg~I~vwd~~-~~~~~~l-~~h~~------------------------------------------------------  120 (557)
                      +.||.|.-|+.. +..-+.. ++|..                                                      
T Consensus       339 syDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~  418 (603)
T KOG0318|consen  339 SYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGG  418 (603)
T ss_pred             ccCceEEEEecCCccccccccccccceEEEEeecCCCcEEEEecCCeEEEEecccCcccccceeecCCCceeEEEcCCCC
Confidence            999999999821 1110000 11111                                                      


Q ss_pred             --------------------------CEEEEEEeCCCe-EEEEECCCeEEEEECCCCe--EEEEEeCCCCcEEEEEE--c
Q psy7057         121 --------------------------CVRGLAVLNDTD-FVSCSNDASIRVWDSTTGK--CVHTMYGHPNFIYSVAA--H  169 (557)
Q Consensus       121 --------------------------~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~--~~~~~~~h~~~V~~l~~--~  169 (557)
                                                ...+++++|++. ++.|+.|+.|+||.+....  ....+..|.+.|+++++  +
T Consensus       419 ~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~~~~~vaVGG~Dgkvhvysl~g~~l~ee~~~~~h~a~iT~vaySpd  498 (603)
T KOG0318|consen  419 TAVVACISDIVLLQDQTKVSSIPIGYESSAVAVSPDGSEVAVGGQDGKVHVYSLSGDELKEEAKLLEHRAAITDVAYSPD  498 (603)
T ss_pred             EEEEEecCcEEEEecCCcceeeccccccceEEEcCCCCEEEEecccceEEEEEecCCcccceeeeecccCCceEEEECCC
Confidence                                      234556666655 5577888888888876543  23345568899999999  7


Q ss_pred             CCEEEEEeCCCeEEEEECCCC----ceEeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeE
Q psy7057         170 GDLITSGGEDQCVCVYQNKAQ----NSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVK  244 (557)
Q Consensus       170 ~~~l~s~s~Dg~I~iwd~~~~----~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~  244 (557)
                      +.+|++|...+.+.+||..+.    .....|...|.+++|+|+.. +++|+-|-.|.||+++..... .....+|...+.
T Consensus       499 ~~yla~~Da~rkvv~yd~~s~~~~~~~w~FHtakI~~~aWsP~n~~vATGSlDt~Viiysv~kP~~~-i~iknAH~~gVn  577 (603)
T KOG0318|consen  499 GAYLAAGDASRKVVLYDVASREVKTNRWAFHTAKINCVAWSPNNKLVATGSLDTNVIIYSVKKPAKH-IIIKNAHLGGVN  577 (603)
T ss_pred             CcEEEEeccCCcEEEEEcccCceecceeeeeeeeEEEEEeCCCceEEEeccccceEEEEEccChhhh-eEeccccccCce
Confidence            779999999999999996554    45556889999999999998 889999999999999865443 445566777799


Q ss_pred             EEeccCCCceeEEEEeCCCcEEEEecC
Q psy7057         245 KLKSANEQEIGGVKVSDDGIVRVFSAN  271 (557)
Q Consensus       245 ~l~~~~~~~~~~vs~s~DG~IrvW~~~  271 (557)
                      .+.+..+.  .+++.+.|-.||+|++.
T Consensus       578 ~v~wlde~--tvvSsG~Da~iK~W~v~  602 (603)
T KOG0318|consen  578 SVAWLDES--TVVSSGQDANIKVWNVT  602 (603)
T ss_pred             eEEEecCc--eEEeccCcceeEEeccc
Confidence            99887655  47999999999999875

>KOG0306|consensus

Probab=99.95  E-value=1.9e-26  Score=238.68  Aligned_cols=267  Identities=25%  Similarity=0.305  Sum_probs=228.5

Q ss_pred             EeccCcccEEEEEEcCCCcEEEEECCCcEEEEcCCC--------------CCCCCCCCEEEEEECCCeEEEEECCCCeEE
Q psy7057           7 ALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPND--------------LSPGAKVNTLLSASWDMTAKLWCLESQQCK   72 (557)
Q Consensus         7 ~l~gH~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~--------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~   72 (557)
                      ++.||...|+++++|.+..++..+..++++||+..+              ..+-|...++++|...|.+.+||+.+...+
T Consensus       368 ~~~GHR~dVRsl~vS~d~~~~~Sga~~SikiWn~~t~kciRTi~~~y~l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS~~l~  447 (888)
T KOG0306|consen  368 EIGGHRSDVRSLCVSSDSILLASGAGESIKIWNRDTLKCIRTITCGYILASKFVPGDRYIVLGTKNGELQVFDLASASLV  447 (888)
T ss_pred             eeccchhheeEEEeecCceeeeecCCCcEEEEEccCcceeEEeccccEEEEEecCCCceEEEeccCCceEEEEeehhhhh
Confidence            568999999999999998766667788999999986              345667899999999999999999999999


Q ss_pred             EEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeC----C--CcEEEEEe-------CCCCCEEEEEEeCCCeEE-EEE
Q psy7057          73 LTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSE----E--GEFLKTLT-------GHTDCVRGLAVLNDTDFV-SCS  137 (557)
Q Consensus        73 ~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~----~--~~~~~~l~-------~h~~~V~~l~~~~~~~lv-s~s  137 (557)
                      .+++.|.+.|++++.+|++ .+++||.|.+|++||.    +  +...+.+.       .-.+.|.|+.++|+++++ .+-
T Consensus       448 Eti~AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Spdgk~LaVsL  527 (888)
T KOG0306|consen  448 ETIRAHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSPDGKLLAVSL  527 (888)
T ss_pred             hhhhccccceeeeeecCCCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEcCCCcEEEEEe
Confidence            9999999999999999999 9999999999999992    1  22222122       235679999999999965 677


Q ss_pred             CCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEEC--CCC-ceEeeCCccEEEEEEcCCCc-E
Q psy7057         138 NDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQN--KAQ-NSFMIPAMSVWAVAILPNSD-I  211 (557)
Q Consensus       138 ~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~--~~~-~~~~~~~~~v~~v~~~p~g~-l  211 (557)
                      -|.++++|-+.+.+...++.||.-+|.||..  +++.++|||.|++|++|-+  +.| +.+..|...|.+|.|.|... |
T Consensus       528 LdnTVkVyflDtlKFflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCHKS~fAHdDSvm~V~F~P~~~~F  607 (888)
T KOG0306|consen  528 LDNTVKVYFLDTLKFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHKSFFAHDDSVMSVQFLPKTHLF  607 (888)
T ss_pred             ccCeEEEEEecceeeeeeecccccceeEEeccCCcCeEEeccCCCceEEeccccchhhhhhhcccCceeEEEEcccceeE
Confidence            8999999999999999999999999999988  7889999999999999974  556 88899999999999999887 8


Q ss_pred             EEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCChhh
Q psy7057         212 VTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQA  276 (557)
Q Consensus       212 ~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~~~~  276 (557)
                      +++|.|+.|+-||-..-..  .....+|...++++...+... .++++|.|.+||+|....+-..
T Consensus       608 Ft~gKD~kvKqWDg~kFe~--iq~L~~H~~ev~cLav~~~G~-~vvs~shD~sIRlwE~tde~~~  669 (888)
T KOG0306|consen  608 FTCGKDGKVKQWDGEKFEE--IQKLDGHHSEVWCLAVSPNGS-FVVSSSHDKSIRLWERTDEILI  669 (888)
T ss_pred             EEecCcceEEeechhhhhh--heeeccchheeeeeEEcCCCC-eEEeccCCceeEeeeccCccee
Confidence            8999999999998765443  345567888899998877765 5899999999999998775443

>KOG0645|consensus

Probab=99.95  E-value=1.3e-25  Score=208.12  Aligned_cols=272  Identities=21%  Similarity=0.317  Sum_probs=206.8

Q ss_pred             EEEcCCCCCCCCC-CCEEEEEECCCeEEEEECCC---CeEEEEE-cccCCcEEEEEEcCCC-EEEEEECCCeEEEEe---
Q psy7057          36 KLWKPNDLSPGAK-VNTLLSASWDMTAKLWCLES---QQCKLTI-RQHEMAVWGVIQLANG-IIVTGCADKTIKLHS---  106 (557)
Q Consensus        36 ~iWd~~~~~~~~~-~~~l~sgs~Dg~i~iwd~~~---~~~~~~l-~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd---  106 (557)
                      |+|.   ++++|- |..|++|+.|+.||+|+...   ..+...+ .+|+..|.+++|+|.| +|++||.|.++.||.   
T Consensus        16 r~W~---~awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~t~~Iw~k~~   92 (312)
T KOG0645|consen   16 RVWS---VAWHPGKGVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDATVVIWKKED   92 (312)
T ss_pred             cEEE---EEeccCCceEEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeeccceEEEeecCC
Confidence            5665   346655 77899999999999999884   3455555 4699999999999998 999999999999997   


Q ss_pred             CCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEEEEECCC---CeEEEEEeCCCCcEEEEEEcC--CEEEEEeCCC
Q psy7057         107 EEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVWDSTT---GKCVHTMYGHPNFIYSVAAHG--DLITSGGEDQ  180 (557)
Q Consensus       107 ~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~---~~~~~~~~~h~~~V~~l~~~~--~~l~s~s~Dg  180 (557)
                      .+.+++.++.||...|.|++|+++|. |++||.|+.|-||.+..   .+++..++.|+.-|-.+.|++  .+|+++|.|.
T Consensus        93 ~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~dlL~S~SYDn  172 (312)
T KOG0645|consen   93 GEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTEDLLFSCSYDN  172 (312)
T ss_pred             CceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcCCcceeEEeccCC
Confidence            34478999999999999999999987 66999999999999864   368889999999999999977  6999999999


Q ss_pred             eEEEEECC--C----CceEeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCc
Q psy7057         181 CVCVYQNK--A----QNSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQE  253 (557)
Q Consensus       181 ~I~iwd~~--~----~~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~  253 (557)
                      +|++|+..  .    .+++.+|...|++++|.+.|. |++++.|++++||.....-      ...+...+..+++.   .
T Consensus       173 TIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~~~~------~~~~sr~~Y~v~W~---~  243 (312)
T KOG0645|consen  173 TIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRLYTDL------SGMHSRALYDVPWD---N  243 (312)
T ss_pred             eEEEEeecCCCCeeEEEEecCccceEEEEEecCCCceEEEecCCcceEeeeeccCc------chhcccceEeeeec---c
Confidence            99999844  2    278889999999999999996 9999999999999865321      12344556666665   2


Q ss_pred             eeEEEEeCCCcEEEEecCCChhhHHHHHHHHHHHHHHHhhhhhcccCCeeccCCCCcccccCCCccCccEEEEe
Q psy7057         254 IGGVKVSDDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDLPGKEVLYEPGKADGDVKMVR  327 (557)
Q Consensus       254 ~~~vs~s~DG~IrvW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~G~~~~~~~~~~  327 (557)
                      -.+++++.|+.||+|..+..-.-+. .     +.+.+.+...+..+..++  =.|+....++.|..||.++++.
T Consensus       244 ~~IaS~ggD~~i~lf~~s~~~d~p~-~-----~l~~~~~~aHe~dVNsV~--w~p~~~~~L~s~~DDG~v~~W~  309 (312)
T KOG0645|consen  244 GVIASGGGDDAIRLFKESDSPDEPS-W-----NLLAKKEGAHEVDVNSVQ--WNPKVSNRLASGGDDGIVNFWE  309 (312)
T ss_pred             cceEeccCCCEEEEEEecCCCCCch-H-----HHHHhhhcccccccceEE--EcCCCCCceeecCCCceEEEEE
Confidence            3578999999999998763211111 0     112222222223333332  2334455566777888887764

>KOG0266|consensus

Probab=99.95  E-value=4.2e-26  Score=242.76  Aligned_cols=231  Identities=25%  Similarity=0.370  Sum_probs=194.9

Q ss_pred             CCCCCCCCEEEEEECCCeEEEEECCCCe--EEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeC-C-CcEEEEEeC
Q psy7057          43 LSPGAKVNTLLSASWDMTAKLWCLESQQ--CKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSE-E-GEFLKTLTG  117 (557)
Q Consensus        43 ~~~~~~~~~l~sgs~Dg~i~iwd~~~~~--~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~-~-~~~~~~l~~  117 (557)
                      +.+++++..+++++.++.+++|++.+.+  ....+.+|...|.+++|+|++ .+++++.|++|++||. . +..++++++
T Consensus       165 ~~fs~~g~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~~~~~~l~g  244 (456)
T KOG0266|consen  165 VDFSPDGRALAAASSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDDGRNLKTLKG  244 (456)
T ss_pred             EEEcCCCCeEEEccCCCcEEEeecccccchhhccccccccceeeeEECCCCcEEEEecCCceEEEeeccCCCeEEEEecC
Confidence            5677889999999999999999997777  777888999999999999999 9999999999999995 3 478899999


Q ss_pred             CCCCEEEEEEeCCCe-EEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCCc---
Q psy7057         118 HTDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQN---  191 (557)
Q Consensus       118 h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~~---  191 (557)
                      |...|++++|+|.+. +++|+.|++|++||+++++++..+.+|...|.+++|  ++..|++++.|+.|++||+.+..   
T Consensus       245 H~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~i~vwd~~~~~~~~  324 (456)
T KOG0266|consen  245 HSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSPDGNLLVSASYDGTIRVWDLETGSKLC  324 (456)
T ss_pred             CCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECCCCCEEEEcCCCccEEEEECCCCceee
Confidence            999999999999986 779999999999999999999999999999999999  78899999999999999977664   


Q ss_pred             --eEeeCCc--cEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEE--eccCCCceeEEEEeCCCc
Q psy7057         192 --SFMIPAM--SVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKL--KSANEQEIGGVKVSDDGI  264 (557)
Q Consensus       192 --~~~~~~~--~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l--~~~~~~~~~~vs~s~DG~  264 (557)
                        .+..+..  +++++.|+|++. +++++.|+.+++|++...............  +..+  .........+++|+.|+.
T Consensus       325 ~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~sg~~d~~  402 (456)
T KOG0266|consen  325 LKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSGKSVGTYTGHSNL--VRCIFSPTLSTGGKLIYSGSEDGS  402 (456)
T ss_pred             eecccCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEccCCcceeeecccCCc--ceeEecccccCCCCeEEEEeCCce
Confidence              3444444  599999999999 889999999999999977654333222221  1122  112334556799999999


Q ss_pred             EEEEecCCChh
Q psy7057         265 VRVFSANPDRQ  275 (557)
Q Consensus       265 IrvW~~~~~~~  275 (557)
                      |.+|++.+...
T Consensus       403 v~~~~~~s~~~  413 (456)
T KOG0266|consen  403 VYVWDSSSGGI  413 (456)
T ss_pred             EEEEeCCccch
Confidence            99999997533

>KOG0296|consensus

Probab=99.95  E-value=2.3e-26  Score=220.93  Aligned_cols=265  Identities=19%  Similarity=0.208  Sum_probs=225.0

Q ss_pred             EEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEEC
Q psy7057           4 LSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCL   66 (557)
Q Consensus         4 l~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~   66 (557)
                      ....+.||.+.|+|+.|+.||. |+||+.+|.|+||+..+                +.++|.+..|+.|+.||.+.+|.+
T Consensus        98 ~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg~~~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~i  177 (399)
T KOG0296|consen   98 FAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTGGEQWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQI  177 (399)
T ss_pred             ceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEcccCceEEEeecccCceEEEEecccccEEEeecCCCcEEEEEC
Confidence            3567899999999999999999 88999999999999887                788999999999999999999999


Q ss_pred             CCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCC-CCCEEEEEEeCCCe-EEEEECCCeE
Q psy7057          67 ESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGH-TDCVRGLAVLNDTD-FVSCSNDASI  142 (557)
Q Consensus        67 ~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h-~~~V~~l~~~~~~~-lvs~s~Dg~I  142 (557)
                      .++.....+.+|..+++|=.|.|+| +++++..||+|++|+ .++.++..+.+- .....++.++..+. +++|+.++.+
T Consensus       178 p~~~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~  257 (399)
T KOG0296|consen  178 PSQALCKVMSGHNSPCTCGEFIPDGKRILTGYDDGTIIVWNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVA  257 (399)
T ss_pred             CCcceeeEecCCCCCcccccccCCCceEEEEecCceEEEEecCCCceeEEecccccCcCCccccccccceeEeccCCccE
Confidence            9988889999999999999999999 999999999999999 788888887632 34566777776666 6689999999


Q ss_pred             EEEECCCCeEEEEEe--------CCCCcEEEEEE---cC--CEEEEEeCCCeEEEEECCCC--ceEeeCCccEEEEEEcC
Q psy7057         143 RVWDSTTGKCVHTMY--------GHPNFIYSVAA---HG--DLITSGGEDQCVCVYQNKAQ--NSFMIPAMSVWAVAILP  207 (557)
Q Consensus       143 ~vwd~~~~~~~~~~~--------~h~~~V~~l~~---~~--~~l~s~s~Dg~I~iwd~~~~--~~~~~~~~~v~~v~~~p  207 (557)
                      ++-+..+|+.+....        .+...+.|+.+   ..  .+.++|+-||+|.|||+...  +.+..|...|..+.|.+
T Consensus       258 ~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL~A~G~vdG~i~iyD~a~~~~R~~c~he~~V~~l~w~~  337 (399)
T KOG0296|consen  258 CGVNNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKLPLAACGSVDGTIAIYDLAASTLRHICEHEDGVTKLKWLN  337 (399)
T ss_pred             EEEccccceEEEecCCCCccccccchhhhhhhhhcccccccchhhcccccceEEEEecccchhheeccCCCceEEEEEcC
Confidence            999988898887766        34555556555   22  36889999999999997665  77778889999999999


Q ss_pred             CCcEEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecC
Q psy7057         208 NSDIVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSAN  271 (557)
Q Consensus       208 ~g~l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~  271 (557)
                      ...+++++.+|.||.||.++++..  ....+|...|..+...+. ...++|+|.|++.+||.+.
T Consensus       338 t~~l~t~c~~g~v~~wDaRtG~l~--~~y~GH~~~Il~f~ls~~-~~~vvT~s~D~~a~VF~v~  398 (399)
T KOG0296|consen  338 TDYLLTACANGKVRQWDARTGQLK--FTYTGHQMGILDFALSPQ-KRLVVTVSDDNTALVFEVP  398 (399)
T ss_pred             cchheeeccCceEEeeeccccceE--EEEecCchheeEEEEcCC-CcEEEEecCCCeEEEEecC
Confidence            444999999999999999999875  344567777887776664 4568999999999999864

>KOG0274|consensus

Probab=99.95  E-value=2.5e-26  Score=244.67  Aligned_cols=262  Identities=25%  Similarity=0.397  Sum_probs=217.7

Q ss_pred             Eecc-CcccEEEEEEcCCCcEEEEECCCcEEEEcCCC-----------------CCCCCCCCEEEEEECCCeEEEEECCC
Q psy7057           7 ALYG-HSMDVRSLSVTPDGCILSASRDKSAKLWKPND-----------------LSPGAKVNTLLSASWDMTAKLWCLES   68 (557)
Q Consensus         7 ~l~g-H~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~-----------------~~~~~~~~~l~sgs~Dg~i~iwd~~~   68 (557)
                      .+.+ |...+.+..|. ++.+++++.|++|++|+..+                 +.+...++.+++|+.|.++++||..+
T Consensus       202 ~~~~~~~~~~~~~q~~-~~~~~~~s~~~tl~~~~~~~~~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~s  280 (537)
T KOG0274|consen  202 VLLGTDDHVVLCLQLH-DGFFKSGSDDSTLHLWDLNNGYLILTRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCST  280 (537)
T ss_pred             eecccCcchhhhheee-cCeEEecCCCceeEEeecccceEEEeeccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCC
Confidence            3444 56678888888 77899999999999999877                 33333478999999999999999999


Q ss_pred             CeEEEEEcccCCcEEEEEEcCCCEEEEEECCCeEEEEeC-CCcEEEEEeCCCCCEEEEEEeCCCeEEEEECCCeEEEEEC
Q psy7057          69 QQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSE-EGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDS  147 (557)
Q Consensus        69 ~~~~~~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~-~~~~~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~  147 (557)
                      ++|..++.+|...|.++... ...+++|+.|.+|++|+. ++.++..+.+|..+|+++... .+.+++|+.|++|++||+
T Consensus       281 g~C~~~l~gh~stv~~~~~~-~~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~-~~~lvsgs~d~~v~VW~~  358 (537)
T KOG0274|consen  281 GECTHSLQGHTSSVRCLTID-PFLLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQLD-EPLLVSGSYDGTVKVWDP  358 (537)
T ss_pred             CcEEEEecCCCceEEEEEcc-CceEeeccCCceEEEEeccCcceEEEeccccccEEEEEec-CCEEEEEecCceEEEEEh
Confidence            99999999999999998754 337888999999999995 588889999999999999998 677899999999999999


Q ss_pred             CCCeEEEEEeCCCCcEEEEEEcC-CEEEEEeCCCeEEEEECCCC----ceEeeCCccEEEEEEcCCCcEEEEEcCCcEEE
Q psy7057         148 TTGKCVHTMYGHPNFIYSVAAHG-DLITSGGEDQCVCVYQNKAQ----NSFMIPAMSVWAVAILPNSDIVTGSSDGIVRV  222 (557)
Q Consensus       148 ~~~~~~~~~~~h~~~V~~l~~~~-~~l~s~s~Dg~I~iwd~~~~----~~~~~~~~~v~~v~~~p~g~l~sg~~Dg~I~i  222 (557)
                      .+++++.++.+|...|+++.+++ ..+++|+.|++|++||++..    ..+.+|...+..+.+. +..+++++.|++|++
T Consensus       359 ~~~~cl~sl~gH~~~V~sl~~~~~~~~~Sgs~D~~IkvWdl~~~~~c~~tl~~h~~~v~~l~~~-~~~Lvs~~aD~~Ik~  437 (537)
T KOG0274|consen  359 RTGKCLKSLSGHTGRVYSLIVDSENRLLSGSLDTTIKVWDLRTKRKCIHTLQGHTSLVSSLLLR-DNFLVSSSADGTIKL  437 (537)
T ss_pred             hhceeeeeecCCcceEEEEEecCcceEEeeeeccceEeecCCchhhhhhhhcCCcccccccccc-cceeEeccccccEEE
Confidence            99999999999999999999988 89999999999999997655    5667777777555443 222889999999999


Q ss_pred             EecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCChhh
Q psy7057         223 FSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQA  276 (557)
Q Consensus       223 wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~~~~  276 (557)
                      ||...+......... +...+..+...   ...+++.+.||++++|++..+...
T Consensus       438 WD~~~~~~~~~~~~~-~~~~v~~l~~~---~~~il~s~~~~~~~l~dl~~~~~~  487 (537)
T KOG0274|consen  438 WDAEEGECLRTLEGR-HVGGVSALALG---KEEILCSSDDGSVKLWDLRSGTLI  487 (537)
T ss_pred             eecccCceeeeeccC-CcccEEEeecC---cceEEEEecCCeeEEEecccCchh
Confidence            999988765443332 44555555543   345789999999999999887544

>KOG0318|consensus

Probab=99.95  E-value=3.7e-25  Score=221.29  Aligned_cols=269  Identities=19%  Similarity=0.232  Sum_probs=222.8

Q ss_pred             EEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC------------------CCCCCC-----------------
Q psy7057           5 STALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND------------------LSPGAK-----------------   48 (557)
Q Consensus         5 ~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~------------------~~~~~~-----------------   48 (557)
                      ...+..|...++-..|+|.|. +++|...|+|||||...                  ++|+.+                 
T Consensus        52 ~~iYtEH~~~vtVAkySPsG~yiASGD~sG~vRIWdtt~~~hiLKnef~v~aG~I~Di~Wd~ds~RI~avGEGrerfg~~  131 (603)
T KOG0318|consen   52 VDIYTEHAHQVTVAKYSPSGFYIASGDVSGKVRIWDTTQKEHILKNEFQVLAGPIKDISWDFDSKRIAAVGEGRERFGHV  131 (603)
T ss_pred             eeeeccccceeEEEEeCCCceEEeecCCcCcEEEEeccCcceeeeeeeeecccccccceeCCCCcEEEEEecCccceeEE
Confidence            345678999999999999998 88999999999999765                  222222                 


Q ss_pred             ----------------------------CCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECC
Q psy7057          49 ----------------------------VNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCAD   99 (557)
Q Consensus        49 ----------------------------~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~d   99 (557)
                                                  .-++++|+.|++|.+|+-.-.+...+++.|...|.|+.|+|+| ++++.+.|
T Consensus       132 F~~DSG~SvGei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPPFKFk~s~r~HskFV~~VRysPDG~~Fat~gsD  211 (603)
T KOG0318|consen  132 FLWDSGNSVGEITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPPFKFKSSFREHSKFVNCVRYSPDGSRFATAGSD  211 (603)
T ss_pred             EEecCCCccceeeccceeEeeeeccCCCceEEEeccCCCeEEEeeCCCeeeeecccccccceeeEEECCCCCeEEEecCC
Confidence                                        2357888888888888766667777888999999999999999 99999999


Q ss_pred             CeEEEEe-CCCcEEEEEe---CCCCCEEEEEEeCCCe-EEEEECCCeEEEEECCCCeEEEEEeCCC---CcEEEEEEcCC
Q psy7057         100 KTIKLHS-EEGEFLKTLT---GHTDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHTMYGHP---NFIYSVAAHGD  171 (557)
Q Consensus       100 g~I~vwd-~~~~~~~~l~---~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h~---~~V~~l~~~~~  171 (557)
                      |+|.+|| .+++.+..+.   +|.+.|.+++|+|++. |+++|.|.+++|||+.+.++++++.--.   .....+.|..+
T Consensus       212 gki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd  291 (603)
T KOG0318|consen  212 GKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKD  291 (603)
T ss_pred             ccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEeCC
Confidence            9999999 8999999887   8999999999999965 9999999999999999999999986432   33444556788


Q ss_pred             EEEEEeCCCeEEEEECCCC---ceEeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEe
Q psy7057         172 LITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLK  247 (557)
Q Consensus       172 ~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~  247 (557)
                      .|++.+.+|+|.+++...+   +.+.+|...|++++.+|++. |++|+.||.|.-|+..++..-. .....|...+..+.
T Consensus       292 ~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~g~~~~-~~g~~h~nqI~~~~  370 (603)
T KOG0318|consen  292 HLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGSYDGHINSWDSGSGTSDR-LAGKGHTNQIKGMA  370 (603)
T ss_pred             eEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEEEeeccCceEEEEecCCccccc-cccccccceEEEEe
Confidence            8999999999999996554   88899999999999999999 9999999999999998765432 22245667777776


Q ss_pred             ccCCCceeEEEEeCCCcEEEEecCCChhh
Q psy7057         248 SANEQEIGGVKVSDDGIVRVFSANPDRQA  276 (557)
Q Consensus       248 ~~~~~~~~~vs~s~DG~IrvW~~~~~~~~  276 (557)
                      ....+.  +++++.|.++|+.++..+...
T Consensus       371 ~~~~~~--~~t~g~Dd~l~~~~~~~~~~t  397 (603)
T KOG0318|consen  371 ASESGE--LFTIGWDDTLRVISLKDNGYT  397 (603)
T ss_pred             ecCCCc--EEEEecCCeEEEEecccCccc
Confidence            655443  689999999999988665443

>KOG0315|consensus

Probab=99.95  E-value=2.9e-26  Score=210.02  Aligned_cols=228  Identities=20%  Similarity=0.306  Sum_probs=192.9

Q ss_pred             EEEEEeccCcccEEEEEEcCCCcEEEEECCCcEEEEcCCC------------------CCCCCCCCEEEEEECCCeEEEE
Q psy7057           3 KLSTALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPND------------------LSPGAKVNTLLSASWDMTAKLW   64 (557)
Q Consensus         3 kl~~~l~gH~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~------------------~~~~~~~~~l~sgs~Dg~i~iw   64 (557)
                      ++.++++...+.|+.+.+.||++.+++.....||+||+++                  +.|..++..+++||.||+++||
T Consensus        31 ~C~rTiqh~dsqVNrLeiTpdk~~LAaa~~qhvRlyD~~S~np~Pv~t~e~h~kNVtaVgF~~dgrWMyTgseDgt~kIW  110 (311)
T KOG0315|consen   31 ICSRTIQHPDSQVNRLEITPDKKDLAAAGNQHVRLYDLNSNNPNPVATFEGHTKNVTAVGFQCDGRWMYTGSEDGTVKIW  110 (311)
T ss_pred             eEEEEEecCccceeeEEEcCCcchhhhccCCeeEEEEccCCCCCceeEEeccCCceEEEEEeecCeEEEecCCCceEEEE
Confidence            4567787777899999999999977777778999999987                  4556678999999999999999


Q ss_pred             ECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCC-CcEEEEEeC-CCCCEEEEEEeCCCeEE-EEECCC
Q psy7057          65 CLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEE-GEFLKTLTG-HTDCVRGLAVLNDTDFV-SCSNDA  140 (557)
Q Consensus        65 d~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~-~~~~~~l~~-h~~~V~~l~~~~~~~lv-s~s~Dg  140 (557)
                      |++...+.+.++ |..+|+++..+|+. .|++|..+|.|++||+. ..+...+.. ....|+++.+.|+|.++ .+...|
T Consensus       111 dlR~~~~qR~~~-~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~liPe~~~~i~sl~v~~dgsml~a~nnkG  189 (311)
T KOG0315|consen  111 DLRSLSCQRNYQ-HNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHELIPEDDTSIQSLTVMPDGSMLAAANNKG  189 (311)
T ss_pred             eccCcccchhcc-CCCCcceEEecCCcceEEeecCCCcEEEEEccCCccccccCCCCCcceeeEEEcCCCcEEEEecCCc
Confidence            999976666665 78999999999977 99999999999999954 335555443 34689999999998855 667779


Q ss_pred             eEEEEECCCC------eEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC----ceEeeCCccEEEEEEcCC
Q psy7057         141 SIRVWDSTTG------KCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ----NSFMIPAMSVWAVAILPN  208 (557)
Q Consensus       141 ~I~vwd~~~~------~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~----~~~~~~~~~v~~v~~~p~  208 (557)
                      +..+|++-+.      +++..++.|...+..+.+  ++++|+++|.|.+++||+....    ..+.+|...+|.++|+.+
T Consensus       190 ~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~~kle~~l~gh~rWvWdc~FS~d  269 (311)
T KOG0315|consen  190 NCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDDFFKLELVLTGHQRWVWDCAFSAD  269 (311)
T ss_pred             cEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecCCceEEEEecCCceeeEEEeecCCceEEeeeeccC
Confidence            9999998653      467788899999988887  7789999999999999996654    667788889999999999


Q ss_pred             Cc-EEEEEcCCcEEEEecCCCCcc
Q psy7057         209 SD-IVTGSSDGIVRVFSANPDRQA  231 (557)
Q Consensus       209 g~-l~sg~~Dg~I~iwd~~~~~~~  231 (557)
                      |+ |++|++|+.+|+|++..++..
T Consensus       270 g~YlvTassd~~~rlW~~~~~k~v  293 (311)
T KOG0315|consen  270 GEYLVTASSDHTARLWDLSAGKEV  293 (311)
T ss_pred             ccEEEecCCCCceeecccccCcee
Confidence            99 999999999999999887654

>KOG0276|consensus

Probab=99.95  E-value=2.1e-26  Score=233.95  Aligned_cols=230  Identities=23%  Similarity=0.333  Sum_probs=208.0

Q ss_pred             CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCC
Q psy7057          43 LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTD  120 (557)
Q Consensus        43 ~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~  120 (557)
                      +.++|....++++-..|.|.||+.++...+..+.-..-+|.+..|.+.. .+++|+.|..|++|+ .+++.++.+..|.+
T Consensus        19 Vd~HPtePw~la~LynG~V~IWnyetqtmVksfeV~~~PvRa~kfiaRknWiv~GsDD~~IrVfnynt~ekV~~FeAH~D   98 (794)
T KOG0276|consen   19 VDFHPTEPWILAALYNGDVQIWNYETQTMVKSFEVSEVPVRAAKFIARKNWIVTGSDDMQIRVFNYNTGEKVKTFEAHSD   98 (794)
T ss_pred             eecCCCCceEEEeeecCeeEEEecccceeeeeeeecccchhhheeeeccceEEEecCCceEEEEecccceeeEEeecccc
Confidence            4567889999999999999999999999999999889999999998865 999999999999999 78899999999999


Q ss_pred             CEEEEEEeCCCe-EEEEECCCeEEEEECCC-CeEEEEEeCCCCcEEEEEE---cCCEEEEEeCCCeEEEEECCCC---ce
Q psy7057         121 CVRGLAVLNDTD-FVSCSNDASIRVWDSTT-GKCVHTMYGHPNFIYSVAA---HGDLITSGGEDQCVCVYQNKAQ---NS  192 (557)
Q Consensus       121 ~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~-~~~~~~~~~h~~~V~~l~~---~~~~l~s~s~Dg~I~iwd~~~~---~~  192 (557)
                      -|+|++.+|..- ++|+|.|-+|++||... ..|.++|.+|+..|.+++|   +.+.++++|-|++|++|.+++.   .+
T Consensus        99 yIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~~nfT  178 (794)
T KOG0276|consen   99 YIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSPHPNFT  178 (794)
T ss_pred             ceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceeeeeccccEEEEEcCCCCCcee
Confidence            999999999844 77999999999999875 5799999999999999999   5679999999999999998776   88


Q ss_pred             EeeCCccEEEEEEcCCCc---EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEe
Q psy7057         193 FMIPAMSVWAVAILPNSD---IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFS  269 (557)
Q Consensus       193 ~~~~~~~v~~v~~~p~g~---l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~  269 (557)
                      +.+|...|+|+.+-+.|+   +++|+.|.+|+|||..+..+  ...+.+|...+..+.+.+.-++ ++|||.||++|||.
T Consensus       179 l~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~C--V~TLeGHt~Nvs~v~fhp~lpi-iisgsEDGTvriWh  255 (794)
T KOG0276|consen  179 LEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSC--VQTLEGHTNNVSFVFFHPELPI-IISGSEDGTVRIWN  255 (794)
T ss_pred             eeccccCcceEEeccCCCcceEEecCCCceEEEeecchHHH--HHHhhcccccceEEEecCCCcE-EEEecCCccEEEec
Confidence            999999999999999885   99999999999999987654  4667789999999998888775 89999999999999


Q ss_pred             cCCChh
Q psy7057         270 ANPDRQ  275 (557)
Q Consensus       270 ~~~~~~  275 (557)
                      ..+-|.
T Consensus       256 s~Ty~l  261 (794)
T KOG0276|consen  256 SKTYKL  261 (794)
T ss_pred             Ccceeh
Confidence            877554

>KOG0274|consensus

Probab=99.95  E-value=3.4e-26  Score=243.65  Aligned_cols=230  Identities=28%  Similarity=0.420  Sum_probs=200.3

Q ss_pred             EEEEEeccCcccEEEEEEcCCC-cEEEEECCCcEEEEcCCC--------------CCCCCCCCEEEEEECCCeEEEEECC
Q psy7057           3 KLSTALYGHSMDVRSLSVTPDG-CILSASRDKSAKLWKPND--------------LSPGAKVNTLLSASWDMTAKLWCLE   67 (557)
Q Consensus         3 kl~~~l~gH~~~V~~l~~spdg-~l~sgs~Dg~V~iWd~~~--------------~~~~~~~~~l~sgs~Dg~i~iwd~~   67 (557)
                      .+...|.||.+.|+++++..-+ .|++|+.|.++++||..+              .........+++||.|.+|++|+++
T Consensus       240 ~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~C~~~l~gh~stv~~~~~~~~~~~sgs~D~tVkVW~v~  319 (537)
T KOG0274|consen  240 LILTRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGECTHSLQGHTSSVRCLTIDPFLLVSGSRDNTVKVWDVT  319 (537)
T ss_pred             EEEeeccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCcEEEEecCCCceEEEEEccCceEeeccCCceEEEEecc
Confidence            4455599999999999998733 499999999999999877              1223345678889999999999999


Q ss_pred             CCeEEEEEcccCCcEEEEEEcCCCEEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCeEEEEECCCeEEEEE
Q psy7057          68 SQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWD  146 (557)
Q Consensus        68 ~~~~~~~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd  146 (557)
                      ++.++.++.+|..+|.++... ...+++|+.|++|++|| ..+++++++.+|...|.++.+.+...+++|+.|++|++||
T Consensus       320 n~~~l~l~~~h~~~V~~v~~~-~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~~~V~sl~~~~~~~~~Sgs~D~~IkvWd  398 (537)
T KOG0274|consen  320 NGACLNLLRGHTGPVNCVQLD-EPLLVSGSYDGTVKVWDPRTGKCLKSLSGHTGRVYSLIVDSENRLLSGSLDTTIKVWD  398 (537)
T ss_pred             CcceEEEeccccccEEEEEec-CCEEEEEecCceEEEEEhhhceeeeeecCCcceEEEEEecCcceEEeeeeccceEeec
Confidence            999999999999999999988 66999999999999999 7889999999999999999887766789999999999999


Q ss_pred             CCCC-eEEEEEeCCCCcEEEEEEcCCEEEEEeCCCeEEEEECCCC---ceEee-CCccEEEEEEcCCCcEEEEEcCCcEE
Q psy7057         147 STTG-KCVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQ---NSFMI-PAMSVWAVAILPNSDIVTGSSDGIVR  221 (557)
Q Consensus       147 ~~~~-~~~~~~~~h~~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~~---~~~~~-~~~~v~~v~~~p~g~l~sg~~Dg~I~  221 (557)
                      +++. +|+.++.+|...+..+.+.+++|++++.|++|++||..+.   +.+.. +...|.++++. +..+++++.||+++
T Consensus       399 l~~~~~c~~tl~~h~~~v~~l~~~~~~Lvs~~aD~~Ik~WD~~~~~~~~~~~~~~~~~v~~l~~~-~~~il~s~~~~~~~  477 (537)
T KOG0274|consen  399 LRTKRKCIHTLQGHTSLVSSLLLRDNFLVSSSADGTIKLWDAEEGECLRTLEGRHVGGVSALALG-KEEILCSSDDGSVK  477 (537)
T ss_pred             CCchhhhhhhhcCCcccccccccccceeEeccccccEEEeecccCceeeeeccCCcccEEEeecC-cceEEEEecCCeeE
Confidence            9999 9999999999999999999999999999999999996655   55555 45677777776 33499999999999


Q ss_pred             EEecCCCCcchhH
Q psy7057         222 VFSANPDRQAEDA  234 (557)
Q Consensus       222 iwd~~~~~~~~~~  234 (557)
                      +||++++......
T Consensus       478 l~dl~~~~~~~~l  490 (537)
T KOG0274|consen  478 LWDLRSGTLIRTL  490 (537)
T ss_pred             EEecccCchhhhh
Confidence            9999988765433

>KOG0292|consensus

Probab=99.95  E-value=1.3e-26  Score=243.05  Aligned_cols=231  Identities=25%  Similarity=0.314  Sum_probs=208.7

Q ss_pred             CCCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCC
Q psy7057          42 DLSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHT  119 (557)
Q Consensus        42 ~~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~  119 (557)
                      .++++|....++++-..|.|++||.+-+.++..|..|.++|..++|+|.+ +++||+.|-.|++|+ .+.+++.++.+|-
T Consensus        14 glsFHP~rPwILtslHsG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~rrclftL~GHl   93 (1202)
T KOG0292|consen   14 GLSFHPKRPWILTSLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTRRCLFTLLGHL   93 (1202)
T ss_pred             ceecCCCCCEEEEeecCceeeeehhhhhhHHhhhhccCCccceeeecCCCCeEEecCCccEEEEEecccceehhhhcccc
Confidence            37899999999999999999999999999999999999999999999998 999999999999999 6778999999999


Q ss_pred             CCEEEEEEeCCCe-EEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEEcC--CEEEEEeCCCeEEEEECCCC------
Q psy7057         120 DCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHG--DLITSGGEDQCVCVYQNKAQ------  190 (557)
Q Consensus       120 ~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~~~--~~l~s~s~Dg~I~iwd~~~~------  190 (557)
                      +-|+.+.|++.-- ++|+|.|.+||||+..+++|+..+.||...|.|..|++  +.++|+|-|.+||+||....      
T Consensus        94 DYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhptEDlIVSaSLDQTVRVWDisGLRkk~~~  173 (1202)
T KOG0292|consen   94 DYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTVRVWDISGLRKKNKA  173 (1202)
T ss_pred             ceeEEeeccCCCceEEEccCCCeEEEEeccCCceEEEEecCceEEEeeccCCccceEEEecccceEEEEeecchhccCCC
Confidence            9999999998854 88999999999999999999999999999999999955  68999999999999994211      


Q ss_pred             --------------------------ceEeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHhccccee
Q psy7057         191 --------------------------NSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEV  243 (557)
Q Consensus       191 --------------------------~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v  243 (557)
                                                ..+.+|...|+-++|+|.-. |++|+.|+.|++|..+..+.-....+.+|.+.|
T Consensus       174 pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmnetKaWEvDtcrgH~nnV  253 (1202)
T KOG0292|consen  174 PGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTCRGHYNNV  253 (1202)
T ss_pred             CCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEEeccccceeehhhhcccCCc
Confidence                                      12345777899999999887 889999999999999987777778888999999


Q ss_pred             EEEeccCCCceeEEEEeCCCcEEEEecCCC
Q psy7057         244 KKLKSANEQEIGGVKVSDDGIVRVFSANPD  273 (557)
Q Consensus       244 ~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~  273 (557)
                      .++.+.+... .++|.|.|++|||||++..
T Consensus       254 ssvlfhp~q~-lIlSnsEDksirVwDm~kR  282 (1202)
T KOG0292|consen  254 SSVLFHPHQD-LILSNSEDKSIRVWDMTKR  282 (1202)
T ss_pred             ceEEecCccc-eeEecCCCccEEEEecccc
Confidence            9998877655 5899999999999998865

>KOG0275|consensus

Probab=99.95  E-value=1.7e-27  Score=224.87  Aligned_cols=257  Identities=22%  Similarity=0.360  Sum_probs=217.1

Q ss_pred             cCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC------------------------CCCCCCCCEEEEEECCCeEEEE
Q psy7057          10 GHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND------------------------LSPGAKVNTLLSASWDMTAKLW   64 (557)
Q Consensus        10 gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~------------------------~~~~~~~~~l~sgs~Dg~i~iw   64 (557)
                      |..+-+-|..|||||. |++||.||-|.+|+..+                        ++++.+...+++|+.||.|++|
T Consensus       211 g~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvW  290 (508)
T KOG0275|consen  211 GQKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVW  290 (508)
T ss_pred             ccccchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEE
Confidence            4567788999999999 89999999999999766                        6788889999999999999999


Q ss_pred             ECCCCeEEEEEc-ccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCC
Q psy7057          65 CLESQQCKLTIR-QHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDA  140 (557)
Q Consensus        65 d~~~~~~~~~l~-~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg  140 (557)
                      .+.+|.|++.+. .|+..|+|+.|+.++ .+++++.|.++++.- .+|++++.+++|++.|+...|.++|. ++++|.||
T Consensus       291 ri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG~~iisaSsDg  370 (508)
T KOG0275|consen  291 RIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDDGHHIISASSDG  370 (508)
T ss_pred             EEecchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccchhHHHhcCccccccceEEcCCCCeEEEecCCc
Confidence            999999999986 899999999999998 999999999999998 68999999999999999999999976 88999999


Q ss_pred             eEEEEECCCCeEEEEEeC--CCCcEEEEEE---cCCEEEEEeCCCeEEEEECCCC--ceEee---CCccEEEEEEcCCCc
Q psy7057         141 SIRVWDSTTGKCVHTMYG--HPNFIYSVAA---HGDLITSGGEDQCVCVYQNKAQ--NSFMI---PAMSVWAVAILPNSD  210 (557)
Q Consensus       141 ~I~vwd~~~~~~~~~~~~--h~~~V~~l~~---~~~~l~s~s~Dg~I~iwd~~~~--~~~~~---~~~~v~~v~~~p~g~  210 (557)
                      +|++|+.++.+|+.+|+.  ...+|.++-.   ++..+++|....+|++.++...  +.+..   ..+...+++.+|.|.
T Consensus       371 tvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~qGQvVrsfsSGkREgGdFi~~~lSpkGe  450 (508)
T KOG0275|consen  371 TVKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQGQVVRSFSSGKREGGDFINAILSPKGE  450 (508)
T ss_pred             cEEEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEeccceEEeeeccCCccCCceEEEEecCCCc
Confidence            999999999999999974  3457777776   6778999999999999996654  33322   223466778999999


Q ss_pred             -EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEe
Q psy7057         211 -IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFS  269 (557)
Q Consensus       211 -l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~  269 (557)
                       +.+.++|+.++.|...++.....  ...|...+..+... +..+.+++-|.||.+++|.
T Consensus       451 wiYcigED~vlYCF~~~sG~LE~t--l~VhEkdvIGl~HH-PHqNllAsYsEDgllKLWk  507 (508)
T KOG0275|consen  451 WIYCIGEDGVLYCFSVLSGKLERT--LPVHEKDVIGLTHH-PHQNLLASYSEDGLLKLWK  507 (508)
T ss_pred             EEEEEccCcEEEEEEeecCceeee--eecccccccccccC-cccchhhhhcccchhhhcC
Confidence             88999999999999988876432  22344445555443 4455688999999999995

>KOG0283|consensus

Probab=99.95  E-value=8.8e-26  Score=237.99  Aligned_cols=224  Identities=21%  Similarity=0.263  Sum_probs=185.8

Q ss_pred             EEEEec-cCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC---------------------------------------
Q psy7057           4 LSTALY-GHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND---------------------------------------   42 (557)
Q Consensus         4 l~~~l~-gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~---------------------------------------   42 (557)
                      ..+.+. +|.+.|+++.||+||+ ||+|+.|+.|+||.+..                                       
T Consensus       258 ~~Qe~~~ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s  337 (712)
T KOG0283|consen  258 VVQEISNAHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTS  337 (712)
T ss_pred             EeeccccccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccccccc
Confidence            346677 8999999999999999 99999999999997543                                       


Q ss_pred             -------------------------------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEE
Q psy7057          43 -------------------------------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGV   85 (557)
Q Consensus        43 -------------------------------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l   85 (557)
                                                           ++|+ ..++|+++|.|+|||||++...+|+.+|. |.+.|+|+
T Consensus       338 ~~~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWS-Kn~fLLSSSMDKTVRLWh~~~~~CL~~F~-HndfVTcV  415 (712)
T KOG0283|consen  338 SSRKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWS-KNNFLLSSSMDKTVRLWHPGRKECLKVFS-HNDFVTCV  415 (712)
T ss_pred             ccccccCCccccCCCccccccccchhhhhccchhheecccc-cCCeeEeccccccEEeecCCCcceeeEEe-cCCeeEEE
Confidence                                                 4555 46789999999999999999999999997 99999999


Q ss_pred             EEcC--CCEEEEEECCCeEEEEeCCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEEEEECCCCeEEEEEeC--C-
Q psy7057          86 IQLA--NGIIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHTMYG--H-  159 (557)
Q Consensus        86 ~~~~--~~~l~sgs~dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~--h-  159 (557)
                      +|+|  +.++++||.|+.||||++....+.....-..-|+++++.|+|+ .+.|+.+|.+++|++...+....+.-  | 
T Consensus       416 aFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~Dl~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~  495 (712)
T KOG0283|consen  416 AFNPVDDRYFISGSLDGKVRLWSISDKKVVDWNDLRDLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLHN  495 (712)
T ss_pred             EecccCCCcEeecccccceEEeecCcCeeEeehhhhhhheeEEeccCCceEEEEEeccEEEEEEccCCeEEEeeeEeecc
Confidence            9999  4499999999999999977776666665668899999999998 55999999999999887766554421  1 


Q ss_pred             -----CCcEEEEEE---cCCEEEEEeCCCeEEEEECCCC---ceEeeCC--ccEEEEEEcCCCc-EEEEEcCCcEEEEec
Q psy7057         160 -----PNFIYSVAA---HGDLITSGGEDQCVCVYQNKAQ---NSFMIPA--MSVWAVAILPNSD-IVTGSSDGIVRVFSA  225 (557)
Q Consensus       160 -----~~~V~~l~~---~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~--~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~  225 (557)
                           ...|+.+.+   +.+.+++.++|..|||+|++..   ..++++.  ..-....|+.+|+ |+++++|..|+||+.
T Consensus       496 ~Kk~~~~rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~seDs~VYiW~~  575 (712)
T KOG0283|consen  496 KKKKQGKRITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDLVHKFKGFRNTSSQISASFSSDGKHIVSASEDSWVYIWKN  575 (712)
T ss_pred             CccccCceeeeeEecCCCCCeEEEecCCCceEEEeccchhhhhhhcccccCCcceeeeEccCCCEEEEeecCceEEEEeC
Confidence                 227999998   4457999999999999998443   4555433  2345677888999 999999999999998


Q ss_pred             CCCC
Q psy7057         226 NPDR  229 (557)
Q Consensus       226 ~~~~  229 (557)
                      ....
T Consensus       576 ~~~~  579 (712)
T KOG0283|consen  576 DSFN  579 (712)
T ss_pred             CCCc
Confidence            6543

>KOG0278|consensus

Probab=99.95  E-value=6e-27  Score=214.44  Aligned_cols=268  Identities=21%  Similarity=0.303  Sum_probs=221.9

Q ss_pred             EEEeccCcccEEEEEEcC---CCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEE
Q psy7057           5 STALYGHSMDVRSLSVTP---DGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLW   64 (557)
Q Consensus         5 ~~~l~gH~~~V~~l~~sp---dg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iw   64 (557)
                      -.+..||+.+|-.++|||   +|. |+++|.|+.-.+-+-++                ...+.+....++++.|-+.++|
T Consensus         7 pl~c~ghtrpvvdl~~s~itp~g~flisa~kd~~pmlr~g~tgdwigtfeghkgavw~~~l~~na~~aasaaadftakvw   86 (334)
T KOG0278|consen    7 PLTCHGHTRPVVDLAFSPITPDGYFLISASKDGKPMLRNGDTGDWIGTFEGHKGAVWSATLNKNATRAASAAADFTAKVW   86 (334)
T ss_pred             ceEEcCCCcceeEEeccCCCCCceEEEEeccCCCchhccCCCCCcEEeeeccCcceeeeecCchhhhhhhhcccchhhhh
Confidence            356789999999999986   677 88999999877765444                2333445567889999999999


Q ss_pred             ECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCC--CcEEEEEeCCCCCEEEEEEeCC-CeEEEEECCC
Q psy7057          65 CLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEE--GEFLKTLTGHTDCVRGLAVLND-TDFVSCSNDA  140 (557)
Q Consensus        65 d~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~--~~~~~~l~~h~~~V~~l~~~~~-~~lvs~s~Dg  140 (557)
                      |.-+|..+++|. |+..|.+++|+.+. .|++|+.++.+||||++  ..+...+.+|.+.|+.+.|... ..|++++.|+
T Consensus        87 ~a~tgdelhsf~-hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iLSSadd~  165 (334)
T KOG0278|consen   87 DAVTGDELHSFE-HKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCILSSADDK  165 (334)
T ss_pred             hhhhhhhhhhhh-hhheeeeEEecccchhhhccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEeccCceEEeeccCC
Confidence            999999999987 99999999999988 99999999999999943  3456778899999999999765 5588989999


Q ss_pred             eEEEEECCCCeEEEEEeCCCCcEEEEEE-cCCEEEEEeCCCeEEEEECCCCceEeeC--CccEEEEEEcCCCc-EEEEEc
Q psy7057         141 SIRVWDSTTGKCVHTMYGHPNFIYSVAA-HGDLITSGGEDQCVCVYQNKAQNSFMIP--AMSVWAVAILPNSD-IVTGSS  216 (557)
Q Consensus       141 ~I~vwd~~~~~~~~~~~~h~~~V~~l~~-~~~~l~s~s~Dg~I~iwd~~~~~~~~~~--~~~v~~v~~~p~g~-l~sg~~  216 (557)
                      +||+||.++++.++++. -...|.++.. ....+++....+.|.+||..+...++..  ...|.+.+.+|+.. +++|++
T Consensus       166 tVRLWD~rTgt~v~sL~-~~s~VtSlEvs~dG~ilTia~gssV~Fwdaksf~~lKs~k~P~nV~SASL~P~k~~fVaGge  244 (334)
T KOG0278|consen  166 TVRLWDHRTGTEVQSLE-FNSPVTSLEVSQDGRILTIAYGSSVKFWDAKSFGLLKSYKMPCNVESASLHPKKEFFVAGGE  244 (334)
T ss_pred             ceEEEEeccCcEEEEEe-cCCCCcceeeccCCCEEEEecCceeEEeccccccceeeccCccccccccccCCCceEEecCc
Confidence            99999999999999987 5667888888 3334667777889999998877544443  34688999999988 889999


Q ss_pred             CCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCChhh
Q psy7057         217 DGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQA  276 (557)
Q Consensus       217 Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~~~~  276 (557)
                      |..++.||..++..+... ..+|.++|.++.+.|+... .++||.||+||+|...+.+..
T Consensus       245 d~~~~kfDy~TgeEi~~~-nkgh~gpVhcVrFSPdGE~-yAsGSEDGTirlWQt~~~~~~  302 (334)
T KOG0278|consen  245 DFKVYKFDYNTGEEIGSY-NKGHFGPVHCVRFSPDGEL-YASGSEDGTIRLWQTTPGKTY  302 (334)
T ss_pred             ceEEEEEeccCCceeeec-ccCCCCceEEEEECCCCce-eeccCCCceEEEEEecCCCch
Confidence            999999999998776443 4678899999999988774 799999999999998887554

>KOG0300|consensus

Probab=99.94  E-value=1.9e-25  Score=210.70  Aligned_cols=272  Identities=24%  Similarity=0.302  Sum_probs=227.8

Q ss_pred             cEEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEE
Q psy7057           2 YKLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLW   64 (557)
Q Consensus         2 ~kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iw   64 (557)
                      |++++.|.||.+.|+.++...... +.++|.|.+.+||.+++                +.+++.+.+++++|.|++..||
T Consensus       138 ~~lvre~~GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW  217 (481)
T KOG0300|consen  138 FRLVRELEGHKDGIWHVAADSTQPICGTASADHTARIWSLESGACLATYTGHTGSVNSIKFHNSGLLLLTASGDETAHIW  217 (481)
T ss_pred             EeehhhhcccccceeeehhhcCCcceeecccccceeEEeeccccceeeecccccceeeEEeccccceEEEccCCcchHHH
Confidence            678889999999999998765544 67999999999999887                6778889999999999999999


Q ss_pred             EC------CC----------------------------------CeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEE
Q psy7057          65 CL------ES----------------------------------QQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIK  103 (557)
Q Consensus        65 d~------~~----------------------------------~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~  103 (557)
                      ..      ..                                  ..++..|.+|...|.+..|...+ .++++++|.+..
T Consensus       218 ~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAn  297 (481)
T KOG0300|consen  218 KAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTAN  297 (481)
T ss_pred             HHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeeccccce
Confidence            62      11                                  01566788999999999999988 999999999999


Q ss_pred             EEe-CCCcEEEEEeCCCCCEEEEEEeCCCeEE-EEECCCeEEEEECCCC-eEEEEEeCCCCcEEEEEE-cCCEEEEEeCC
Q psy7057         104 LHS-EEGEFLKTLTGHTDCVRGLAVLNDTDFV-SCSNDASIRVWDSTTG-KCVHTMYGHPNFIYSVAA-HGDLITSGGED  179 (557)
Q Consensus       104 vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~lv-s~s~Dg~I~vwd~~~~-~~~~~~~~h~~~V~~l~~-~~~~l~s~s~D  179 (557)
                      +|| .++.++..+.+|....+.++-+|..+|+ +.|.|.+.++||++.. ..+..|++|...|+++.| .+..+++|+.|
T Consensus       298 lwDVEtge~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFReaI~sV~VFQGHtdtVTS~vF~~dd~vVSgSDD  377 (481)
T KOG0300|consen  298 LWDVETGEVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFREAIQSVAVFQGHTDTVTSVVFNTDDRVVSGSDD  377 (481)
T ss_pred             eeeeccCceeccccCcchhccccccCCcceEEEEeccCceeEeccchhhcceeeeecccccceeEEEEecCCceeecCCC
Confidence            999 6889999999999999999999998855 9999999999999843 457789999999999999 67789999999


Q ss_pred             CeEEEEECCCCc---eEeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhH--HHhcccceeEEEeccCCCc
Q psy7057         180 QCVCVYQNKAQN---SFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDA--VQAQYAEEVKKLKSANEQE  253 (557)
Q Consensus       180 g~I~iwd~~~~~---~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~--~~~~~~~~v~~l~~~~~~~  253 (557)
                      .+|++||++..+   ......++++.++++..+. |+.--.+..||+||++..+.....  ...+|...+++..+....+
T Consensus       378 rTvKvWdLrNMRsplATIRtdS~~NRvavs~g~~iIAiPhDNRqvRlfDlnG~RlaRlPrtsRqgHrRMV~c~AW~eehp  457 (481)
T KOG0300|consen  378 RTVKVWDLRNMRSPLATIRTDSPANRVAVSKGHPIIAIPHDNRQVRLFDLNGNRLARLPRTSRQGHRRMVTCCAWLEEHP  457 (481)
T ss_pred             ceEEEeeeccccCcceeeecCCccceeEeecCCceEEeccCCceEEEEecCCCccccCCcccccccceeeeeeeccccCc
Confidence            999999987662   1223456899999998887 556667788999999988776443  5677888888888877665


Q ss_pred             e-eEEEEeCCCcEEEEecCCC
Q psy7057         254 I-GGVKVSDDGIVRVFSANPD  273 (557)
Q Consensus       254 ~-~~vs~s~DG~IrvW~~~~~  273 (557)
                      . .+++|+-|..+.-|+++..
T Consensus       458 ~cnLftcGFDR~v~gW~in~p  478 (481)
T KOG0300|consen  458 ACNLFTCGFDRMVAGWKINTP  478 (481)
T ss_pred             ccccccccccceeeeeEeccc
Confidence            4 3589999999999998753

>KOG0313|consensus

Probab=99.93  E-value=1.1e-24  Score=210.28  Aligned_cols=223  Identities=27%  Similarity=0.399  Sum_probs=190.4

Q ss_pred             EEEEEeccCcccEEEEEEc-CCCc---EEEEECCCcEEEEcCCC--------------------CCCCCCCCEEEEEECC
Q psy7057           3 KLSTALYGHSMDVRSLSVT-PDGC---ILSASRDKSAKLWKPND--------------------LSPGAKVNTLLSASWD   58 (557)
Q Consensus         3 kl~~~l~gH~~~V~~l~~s-pdg~---l~sgs~Dg~V~iWd~~~--------------------~~~~~~~~~l~sgs~D   58 (557)
                      +...++.||.++|.+++|. ++..   |+++|.|.++++|.++.                    ++..+++..+++||+|
T Consensus       135 k~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~~~~~~~~~~GHk~~V~sVsv~~sgtr~~SgS~D  214 (423)
T KOG0313|consen  135 KSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGENKVKALKVCRGHKRSVDSVSVDSSGTRFCSGSWD  214 (423)
T ss_pred             ceEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCchhhhhHHhHhcccccceeEEEecCCCCeEEeeccc
Confidence            4567889999999988774 3333   89999999999998775                    5667789999999999


Q ss_pred             CeEEEEECCC-------------------------CeEEEEEcccCCcEEEEEEcCCCEEEEEECCCeEEEEe-CCCcEE
Q psy7057          59 MTAKLWCLES-------------------------QQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHS-EEGEFL  112 (557)
Q Consensus        59 g~i~iwd~~~-------------------------~~~~~~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd-~~~~~~  112 (557)
                      .++.||+.++                         ..++.++.+|..+|.++.|++...+.++|+|.+|+.|| ..+..+
T Consensus       215 ~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d~~v~yS~SwDHTIk~WDletg~~~  294 (423)
T KOG0313|consen  215 TMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSDATVIYSVSWDHTIKVWDLETGGLK  294 (423)
T ss_pred             ceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEcCCCceEeecccceEEEEEeecccce
Confidence            9999999321                         23677899999999999999988999999999999999 566666


Q ss_pred             EEEeCCCCCEEEEEEeCCCe-EEEEECCCeEEEEECCCCe---EEEEEeCCCCcEEEEEE---cCCEEEEEeCCCeEEEE
Q psy7057         113 KTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGK---CVHTMYGHPNFIYSVAA---HGDLITSGGEDQCVCVY  185 (557)
Q Consensus       113 ~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~---~~~~~~~h~~~V~~l~~---~~~~l~s~s~Dg~I~iw  185 (557)
                      .++.+ ...+.|+..+|... +++||.|..|++||.+++.   ..++|.+|...|.++.+   +...|++++.|+++++|
T Consensus       295 ~~~~~-~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klW  373 (423)
T KOG0313|consen  295 STLTT-NKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLW  373 (423)
T ss_pred             eeeec-CcceeEeecccccceeeecCCCCceeecCCCCCCCceeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEE
Confidence            66664 56799999999865 6699999999999998763   56788999999999999   44579999999999999


Q ss_pred             ECCCC----ceEeeCCccEEEEEEcCCCcEEEEEcCCcEEEEecC
Q psy7057         186 QNKAQ----NSFMIPAMSVWAVAILPNSDIVTGSSDGIVRVFSAN  226 (557)
Q Consensus       186 d~~~~----~~~~~~~~~v~~v~~~p~g~l~sg~~Dg~I~iwd~~  226 (557)
                      |.++.    ..+..|...|.++.|...+.+++||.|.+|+|+.-.
T Consensus       374 DvRS~k~plydI~~h~DKvl~vdW~~~~~IvSGGaD~~l~i~~~~  418 (423)
T KOG0313|consen  374 DVRSTKAPLYDIAGHNDKVLSVDWNEGGLIVSGGADNKLRIFKGS  418 (423)
T ss_pred             EeccCCCcceeeccCCceEEEEeccCCceEEeccCcceEEEeccc
Confidence            98766    577889999999999987779999999999999654

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=99.93  E-value=5.9e-24  Score=209.04  Aligned_cols=220  Identities=35%  Similarity=0.542  Sum_probs=192.3

Q ss_pred             EEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEECC
Q psy7057           5 STALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCLE   67 (557)
Q Consensus         5 ~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~~   67 (557)
                      ...+.+|...+.++.|+|++. |++++.||.|++|++..                +.+.+++.++++++.++.+++|++.
T Consensus        44 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~  123 (289)
T cd00200          44 LRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVE  123 (289)
T ss_pred             EEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCcccceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECC
Confidence            467788999999999999996 88999999999999875                4455666788888889999999999


Q ss_pred             CCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeC-CCcEEEEEeCCCCCEEEEEEeCCC-eEEEEECCCeEEE
Q psy7057          68 SQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSE-EGEFLKTLTGHTDCVRGLAVLNDT-DFVSCSNDASIRV  144 (557)
Q Consensus        68 ~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~-~~~~~~~l~~h~~~V~~l~~~~~~-~lvs~s~Dg~I~v  144 (557)
                      +++....+..|...|.++.|+|++ ++++++.|+.|++||. .++.+..+..|...|.++.++|++ .+++++.|+.|++
T Consensus       124 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i  203 (289)
T cd00200         124 TGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKL  203 (289)
T ss_pred             CcEEEEEeccCCCcEEEEEEcCcCCEEEEEcCCCcEEEEEccccccceeEecCccccceEEECCCcCEEEEecCCCcEEE
Confidence            899999999999999999999977 6777777999999995 467788888999999999999997 5788888999999


Q ss_pred             EECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC---ceEeeCCccEEEEEEcCCCc-EEEEEcCC
Q psy7057         145 WDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVAILPNSD-IVTGSSDG  218 (557)
Q Consensus       145 wd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg  218 (557)
                      ||+++++.+..+..|...+.++.+  ++.++++++.|+.|++|+....   ..+..|...+.+++|+|++. +++++.|+
T Consensus       204 ~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~  283 (289)
T cd00200         204 WDLSTGKCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLASGSADG  283 (289)
T ss_pred             EECCCCceecchhhcCCceEEEEEcCCCcEEEEEcCCCcEEEEEcCCceeEEEccccCCcEEEEEECCCCCEEEEecCCC
Confidence            999999999998889999999999  3467777777999999997654   55567778899999999987 88999999


Q ss_pred             cEEEEe
Q psy7057         219 IVRVFS  224 (557)
Q Consensus       219 ~I~iwd  224 (557)
                      .|++|+
T Consensus       284 ~i~iw~  289 (289)
T cd00200         284 TIRIWD  289 (289)
T ss_pred             eEEecC
Confidence            999996

>KOG0293|consensus

Probab=99.93  E-value=3.2e-25  Score=215.75  Aligned_cols=226  Identities=22%  Similarity=0.334  Sum_probs=192.6

Q ss_pred             cEEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC-----------------CCCCCCCCEEEEEECCCeEEE
Q psy7057           2 YKLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND-----------------LSPGAKVNTLLSASWDMTAKL   63 (557)
Q Consensus         2 ~kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~-----------------~~~~~~~~~l~sgs~Dg~i~i   63 (557)
                      +++.++|.||..+|.-+.||||.+ |++|+.|..+++||+.+                 .++.|++..+++|+.|+++..
T Consensus       259 ~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~  338 (519)
T KOG0293|consen  259 FKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIM  338 (519)
T ss_pred             eeeeeeeecccCceEEEEECCCCCeEEecCchHheeeccCCcchhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEE
Confidence            688999999999999999999998 99999999999999987                 567789999999999999999


Q ss_pred             EECCCCeEEEEEccc-CCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcEEEEEeCCCCCEEEEEEeCCCeEE-EEECCC
Q psy7057          64 WCLESQQCKLTIRQH-EMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTDFV-SCSNDA  140 (557)
Q Consensus        64 wd~~~~~~~~~l~~h-~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~~~lv-s~s~Dg  140 (557)
                      ||++. +.....++- ...|.+++..+|| .+++.+.|..|++++.....-+.+.....+|++++++.+++++ +--.+.
T Consensus       339 wdlDg-n~~~~W~gvr~~~v~dlait~Dgk~vl~v~~d~~i~l~~~e~~~dr~lise~~~its~~iS~d~k~~LvnL~~q  417 (519)
T KOG0293|consen  339 WDLDG-NILGNWEGVRDPKVHDLAITYDGKYVLLVTVDKKIRLYNREARVDRGLISEEQPITSFSISKDGKLALVNLQDQ  417 (519)
T ss_pred             ecCCc-chhhcccccccceeEEEEEcCCCcEEEEEecccceeeechhhhhhhccccccCceeEEEEcCCCcEEEEEcccC
Confidence            99864 555555554 3679999999999 8888889999999996555444455566789999999999865 666889


Q ss_pred             eEEEEECCCCeEEEEEeCCCCc--EEEEEE---cCCEEEEEeCCCeEEEEECCCC---ceEeeCCccEEEEEEcCCCc--
Q psy7057         141 SIRVWDSTTGKCVHTMYGHPNF--IYSVAA---HGDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVAILPNSD--  210 (557)
Q Consensus       141 ~I~vwd~~~~~~~~~~~~h~~~--V~~l~~---~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p~g~--  210 (557)
                      .|++||+...+.++.+.||...  +..-+|   +..++++||+|+.|+||+..+.   ..+.+|...|++|+|+|...  
T Consensus       418 ei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~sgkll~~LsGHs~~vNcVswNP~~p~m  497 (519)
T KOG0293|consen  418 EIHLWDLEENKLVRKYFGHKQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRISGKLLAVLSGHSKTVNCVSWNPADPEM  497 (519)
T ss_pred             eeEEeecchhhHHHHhhcccccceEEEeccCCCCcceEEecCCCceEEEEEccCCceeEeecCCcceeeEEecCCCCHHH
Confidence            9999999999999999999653  434455   4568999999999999996655   77889999999999999876  


Q ss_pred             EEEEEcCCcEEEEecCCC
Q psy7057         211 IVTGSSDGIVRVFSANPD  228 (557)
Q Consensus       211 l~sg~~Dg~I~iwd~~~~  228 (557)
                      ++++|.||+||||.....
T Consensus       498 ~ASasDDgtIRIWg~~~~  515 (519)
T KOG0293|consen  498 FASASDDGTIRIWGPSDN  515 (519)
T ss_pred             hhccCCCCeEEEecCCcc
Confidence            999999999999987643

>KOG0277|consensus

Probab=99.93  E-value=6.4e-25  Score=201.81  Aligned_cols=214  Identities=17%  Similarity=0.237  Sum_probs=182.7

Q ss_pred             CcccEEEEEEcCCCc--EEEEECCCcEEEEcCCC-----------------CCCCC-CCCEEEEEECCCeEEEEECCCCe
Q psy7057          11 HSMDVRSLSVTPDGC--ILSASRDKSAKLWKPND-----------------LSPGA-KVNTLLSASWDMTAKLWCLESQQ   70 (557)
Q Consensus        11 H~~~V~~l~~spdg~--l~sgs~Dg~V~iWd~~~-----------------~~~~~-~~~~l~sgs~Dg~i~iwd~~~~~   70 (557)
                      -.+.+..++|++...  +++++.||+++|||...                 +.+++ ....++++|+|++|++|+...++
T Consensus        59 ~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~  138 (311)
T KOG0277|consen   59 TEDGLFDVAWSENHENQVIAASGDGSLRLFDLTMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPN  138 (311)
T ss_pred             cccceeEeeecCCCcceEEEEecCceEEEeccCCCCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCc
Confidence            357889999999754  88999999999999654                 23332 34567888999999999999999


Q ss_pred             EEEEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEe--CCCcEEEEEeCCCCCEEEEEEeCC--CeEEEEECCCeEEE
Q psy7057          71 CKLTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHS--EEGEFLKTLTGHTDCVRGLAVLND--TDFVSCSNDASIRV  144 (557)
Q Consensus        71 ~~~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd--~~~~~~~~l~~h~~~V~~l~~~~~--~~lvs~s~Dg~I~v  144 (557)
                      .+.++.+|...|....|+|..  +++++|.|+++++||  ..|+.+. +..|...|.|+.|+.-  ..++||+.|+.||.
T Consensus       139 Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~-i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~  217 (311)
T KOG0277|consen  139 SVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMS-IEAHNSEILCCDWSKYNHNVLATGGVDNLVRG  217 (311)
T ss_pred             ceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeE-EEeccceeEeecccccCCcEEEecCCCceEEE
Confidence            999999999999999999954  999999999999999  4455555 8889999999999865  34779999999999


Q ss_pred             EECCCC-eEEEEEeCCCCcEEEEEEc---CCEEEEEeCCCeEEEEECCCC----ceEeeCCccEEEEEEcCCCc--EEEE
Q psy7057         145 WDSTTG-KCVHTMYGHPNFIYSVAAH---GDLITSGGEDQCVCVYQNKAQ----NSFMIPAMSVWAVAILPNSD--IVTG  214 (557)
Q Consensus       145 wd~~~~-~~~~~~~~h~~~V~~l~~~---~~~l~s~s~Dg~I~iwd~~~~----~~~~~~~~~v~~v~~~p~g~--l~sg  214 (557)
                      ||+++- .++..+.+|.-.|+.+.+.   ...|++++.|-++||||....    .+...|+..+..+.|++-..  ++++
T Consensus       218 wDir~~r~pl~eL~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~ds~~e~~~~HtEFv~g~Dws~~~~~~vAs~  297 (311)
T KOG0277|consen  218 WDIRNLRTPLFELNGHGLAVRKVKFSPHHASLLASASYDMTVRIWDPERQDSAIETVDHHTEFVCGLDWSLFDPGQVAST  297 (311)
T ss_pred             EehhhccccceeecCCceEEEEEecCcchhhHhhhccccceEEecccccchhhhhhhhccceEEeccccccccCceeeec
Confidence            999874 4788899999999999993   458999999999999996543    66778899999999998643  9999


Q ss_pred             EcCCcEEEEec
Q psy7057         215 SSDGIVRVFSA  225 (557)
Q Consensus       215 ~~Dg~I~iwd~  225 (557)
                      +.|..++||+-
T Consensus       298 gWDe~l~Vw~p  308 (311)
T KOG0277|consen  298 GWDELLYVWNP  308 (311)
T ss_pred             ccccceeeecc
Confidence            99999999973

>KOG0296|consensus

Probab=99.93  E-value=2.4e-24  Score=207.15  Aligned_cols=266  Identities=17%  Similarity=0.230  Sum_probs=216.4

Q ss_pred             EEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEECC
Q psy7057           5 STALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCLE   67 (557)
Q Consensus         5 ~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~~   67 (557)
                      ..+|..|+++|.+++.+|+.+ ++||+.|....+|++.+                +.|+.++.+|++|..+|.|+||+..
T Consensus        57 ~~tF~~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~s  136 (399)
T KOG0296|consen   57 LVTFDKHTDSVFAVSLHPNNNLVATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVS  136 (399)
T ss_pred             eeehhhcCCceEEEEeCCCCceEEecCCCceEEEEEccCCcceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEcc
Confidence            467899999999999999777 67999999999999987                6778889999999999999999999


Q ss_pred             CCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCC-cEEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEEE
Q psy7057          68 SQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEG-EFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRV  144 (557)
Q Consensus        68 ~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~-~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~v  144 (557)
                      ++.....+...-..+.=+.|+|.+ .|+.|+.||.+-+|.... ...+.+.+|..++++=.|.|+|+ ++++..||+|++
T Consensus       137 tg~~~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~dgti~~  216 (399)
T KOG0296|consen  137 TGGEQWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIPDGKRILTGYDDGTIIV  216 (399)
T ss_pred             cCceEEEeecccCceEEEEecccccEEEeecCCCcEEEEECCCcceeeEecCCCCCcccccccCCCceEEEEecCceEEE
Confidence            998888887666677779999987 899999999999999544 77888999999999999999987 779999999999


Q ss_pred             EECCCCeEEEEEeCC-CCcEEEEEE--cCCEEEEEeCCCeEEEEECCCCceE-----------eeCCccEEEEEEcCCCc
Q psy7057         145 WDSTTGKCVHTMYGH-PNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQNSF-----------MIPAMSVWAVAILPNSD  210 (557)
Q Consensus       145 wd~~~~~~~~~~~~h-~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~~~~-----------~~~~~~v~~v~~~p~g~  210 (557)
                      ||..++.++.++.+- .....++.+  .+..+++|+.++.+++-...+.+.+           ..+...+.||.+.|...
T Consensus       217 Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss  296 (399)
T KOG0296|consen  217 WNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSS  296 (399)
T ss_pred             EecCCCceeEEecccccCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhhhhhhccccc
Confidence            999999999988732 233445555  6778888888888887774444222           23344566666666543


Q ss_pred             ----EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCChh
Q psy7057         211 ----IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQ  275 (557)
Q Consensus       211 ----l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~~~  275 (557)
                          .++|+-||+|.|||+...+.+...   .|...|..+.+.+  ...+++++.||.||.||..+++.
T Consensus       297 ~lpL~A~G~vdG~i~iyD~a~~~~R~~c---~he~~V~~l~w~~--t~~l~t~c~~g~v~~wDaRtG~l  360 (399)
T KOG0296|consen  297 KLPLAACGSVDGTIAIYDLAASTLRHIC---EHEDGVTKLKWLN--TDYLLTACANGKVRQWDARTGQL  360 (399)
T ss_pred             ccchhhcccccceEEEEecccchhheec---cCCCceEEEEEcC--cchheeeccCceEEeeeccccce
Confidence                568888999999999876654333   3556688888887  34689999999999999887754

>KOG0265|consensus

Probab=99.93  E-value=2.6e-24  Score=202.22  Aligned_cols=218  Identities=29%  Similarity=0.405  Sum_probs=186.3

Q ss_pred             EEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCC-CCEEEEEECCCeEEEEEC
Q psy7057           5 STALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAK-VNTLLSASWDMTAKLWCL   66 (557)
Q Consensus         5 ~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~-~~~l~sgs~Dg~i~iwd~   66 (557)
                      .-+++||+++|..+.|.+|+. |++++.|.+|+.||.++                +.+... ..++.+++.|++++|||+
T Consensus        83 ~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~  162 (338)
T KOG0265|consen   83 FWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDI  162 (338)
T ss_pred             eeeeccccceeEeeeeccCCCEEEEecCCceEEEEecccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEee
Confidence            456889999999999999998 99999999999999987                333332 356778999999999999


Q ss_pred             CCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEE
Q psy7057          67 ESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIR  143 (557)
Q Consensus        67 ~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~  143 (557)
                      ++..++.++. .+..++++.|...+ .+++|+-|+.|++|| .....++++.||.++|+.|..+++|. +++-+.|.+++
T Consensus       163 R~k~~~~t~~-~kyqltAv~f~d~s~qv~sggIdn~ikvWd~r~~d~~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvr  241 (338)
T KOG0265|consen  163 RKKEAIKTFE-NKYQLTAVGFKDTSDQVISGGIDNDIKVWDLRKNDGLYTLSGHADTITGLSLSRYGSFLLSNSMDNTVR  241 (338)
T ss_pred             cccchhhccc-cceeEEEEEecccccceeeccccCceeeeccccCcceEEeecccCceeeEEeccCCCccccccccceEE
Confidence            9888877775 46789999999988 999999999999999 57788999999999999999999987 66999999999


Q ss_pred             EEECCC----CeEEEEEeCCCC----cEEEEEE--cCCEEEEEeCCCeEEEEECCCC---ceEeeCCccEEEEEEcCCCc
Q psy7057         144 VWDSTT----GKCVHTMYGHPN----FIYSVAA--HGDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVAILPNSD  210 (557)
Q Consensus       144 vwd~~~----~~~~~~~~~h~~----~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p~g~  210 (557)
                      +||++-    .+++..+.+|..    ....++|  ++..+.+|+.|+.+++||....   ..+.+|...|.++.|+|...
T Consensus       242 vwd~rp~~p~~R~v~if~g~~hnfeknlL~cswsp~~~~i~ags~dr~vyvwd~~~r~~lyklpGh~gsvn~~~Fhp~e~  321 (338)
T KOG0265|consen  242 VWDVRPFAPSQRCVKIFQGHIHNFEKNLLKCSWSPNGTKITAGSADRFVYVWDTTSRRILYKLPGHYGSVNEVDFHPTEP  321 (338)
T ss_pred             EEEecccCCCCceEEEeecchhhhhhhcceeeccCCCCccccccccceEEEeecccccEEEEcCCcceeEEEeeecCCCc
Confidence            999974    356888887643    2344555  6678999999999999996554   67789999999999999998


Q ss_pred             -EEEEEcCCcEEEE
Q psy7057         211 -IVTGSSDGIVRVF  223 (557)
Q Consensus       211 -l~sg~~Dg~I~iw  223 (557)
                       |++++.|.+|++=
T Consensus       322 iils~~sdk~i~lg  335 (338)
T KOG0265|consen  322 IILSCSSDKTIYLG  335 (338)
T ss_pred             EEEEeccCceeEee
Confidence             7899999999874

>KOG0288|consensus

Probab=99.93  E-value=2.2e-25  Score=217.22  Aligned_cols=260  Identities=19%  Similarity=0.253  Sum_probs=214.5

Q ss_pred             EEeccCcccEEEEEEcCC-CcEEEEECCCcEEEEcCCC------------------CCCCCCCCEEEEEECCCeEEEEEC
Q psy7057           6 TALYGHSMDVRSLSVTPD-GCILSASRDKSAKLWKPND------------------LSPGAKVNTLLSASWDMTAKLWCL   66 (557)
Q Consensus         6 ~~l~gH~~~V~~l~~spd-g~l~sgs~Dg~V~iWd~~~------------------~~~~~~~~~l~sgs~Dg~i~iwd~   66 (557)
                      ..+..|.+.|..+.|-++ +.|++|+.|..|++|+...                  +.+.+++..+++++.|+.+++|++
T Consensus       169 ~~ld~h~gev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~k~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wnv  248 (459)
T KOG0288|consen  169 FVLDAHEGEVHDVEFLRNSDTLATGGSDRIIKLWNVLGEKSELISTLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWNV  248 (459)
T ss_pred             hhhhccccccceeEEccCcchhhhcchhhhhhhhhcccchhhhhhhhhccCCCcceeeecCCCceEEeecCCCceeeeec
Confidence            457789999999999998 5599999999999999765                  667788999999999999999999


Q ss_pred             CCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeC-CCcEEEEEeCCCCCEEEEEEeCCCeEEEEECCCeEEE
Q psy7057          67 ESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSE-EGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRV  144 (557)
Q Consensus        67 ~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~-~~~~~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~I~v  144 (557)
                      .+.+...+|.+|.+.|+++.|.... .+++|+.|.+|++||+ ...|.+++.. .+.+..|+.. ...+++|..|++||+
T Consensus       249 d~~r~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~kt~l~-~S~cnDI~~~-~~~~~SgH~DkkvRf  326 (459)
T KOG0288|consen  249 DSLRLRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKAYCSKTVLP-GSQCNDIVCS-ISDVISGHFDKKVRF  326 (459)
T ss_pred             cchhhhhhhcccccceeeehhhccccceeeccccchhhhhhhhhhheeccccc-cccccceEec-ceeeeecccccceEE
Confidence            9999999999999999999998877 5999999999999994 5566665542 3345555554 334789999999999


Q ss_pred             EECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCCc---eEeeC----CccEEEEEEcCCCc-EEEE
Q psy7057         145 WDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQN---SFMIP----AMSVWAVAILPNSD-IVTG  214 (557)
Q Consensus       145 wd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~~---~~~~~----~~~v~~v~~~p~g~-l~sg  214 (557)
                      ||+++..+..+...+. .|.++..  ++..|++++.|.++.+.|+++..   .+...    .+-.+.+.|+|++. +++|
T Consensus       327 wD~Rs~~~~~sv~~gg-~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAG  405 (459)
T KOG0288|consen  327 WDIRSADKTRSVPLGG-RVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAAG  405 (459)
T ss_pred             EeccCCceeeEeecCc-ceeeEeeccCCeEEeeecCCCceeeeecccccEEEEeeccccccccccceeEECCCCceeeec
Confidence            9999999999988766 8888887  77789999999999999988762   22221    22478899999999 8899


Q ss_pred             EcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEe
Q psy7057         215 SSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFS  269 (557)
Q Consensus       215 ~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~  269 (557)
                      |.||.|+||++.+++.............+.++.|.+.. .++++++.++.+++|.
T Consensus       406 S~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG-~~Llsadk~~~v~lW~  459 (459)
T KOG0288|consen  406 SADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSG-SGLLSADKQKAVTLWT  459 (459)
T ss_pred             cCCCcEEEEEccCceEEEEeccCCCCcceEEEEEcCCC-chhhcccCCcceEecC
Confidence            99999999999998876544444333367778776644 4689999999999994

>KOG1407|consensus

Probab=99.93  E-value=1.5e-23  Score=193.46  Aligned_cols=262  Identities=18%  Similarity=0.254  Sum_probs=214.5

Q ss_pred             EEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC------------------CCC-CCCCCEEEEEECCCeEEEEE
Q psy7057           6 TALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND------------------LSP-GAKVNTLLSASWDMTAKLWC   65 (557)
Q Consensus         6 ~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~------------------~~~-~~~~~~l~sgs~Dg~i~iwd   65 (557)
                      +.+++|...|.+|+|+.+|. |++|+.|+++++|++..                  +.+ .+..+.+++++.|.+|++||
T Consensus        14 r~~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd   93 (313)
T KOG1407|consen   14 RELQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWD   93 (313)
T ss_pred             HHhhhhhhcceEEEEcccCceeeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEEE
Confidence            56789999999999999998 99999999999999876                  333 34578899999999999999


Q ss_pred             CCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEE
Q psy7057          66 LESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIR  143 (557)
Q Consensus        66 ~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~  143 (557)
                      .+++++...+......+. +.|+|+| .++.++.|..|.+.|.....+..-......+.-++|+.++. |+....-|+|.
T Consensus        94 ~r~~k~~~~i~~~~eni~-i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~~~~e~ne~~w~~~nd~Fflt~GlG~v~  172 (313)
T KOG1407|consen   94 IRSGKCTARIETKGENIN-ITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQFKFEVNEISWNNSNDLFFLTNGLGCVE  172 (313)
T ss_pred             eccCcEEEEeeccCcceE-EEEcCCCCEEEEecCcccEEEEEecccceeehhcccceeeeeeecCCCCEEEEecCCceEE
Confidence            999999998876666664 6788877 99999999999999944433333333555677788876554 55556669999


Q ss_pred             EEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC---ceEeeCCccEEEEEEcCCCc-EEEEEcC
Q psy7057         144 VWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVAILPNSD-IVTGSSD  217 (557)
Q Consensus       144 vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p~g~-l~sg~~D  217 (557)
                      |......+++.+++.|+....||.|  +|++|++|+.|..+.+||+.+.   +.+..+.-+|+.++|+.+|+ |++|++|
T Consensus       173 ILsypsLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~isRldwpVRTlSFS~dg~~lASaSED  252 (313)
T KOG1407|consen  173 ILSYPSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICERCISRLDWPVRTLSFSHDGRMLASASED  252 (313)
T ss_pred             EEeccccccccccccCCcceEEEEECCCCceEeeccccceeeccChhHhhhheeeccccCceEEEEeccCcceeeccCcc
Confidence            9999999999999999999999999  7889999999999999998876   77788888999999999999 8899999


Q ss_pred             CcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeC-C-------CcEEEEecC
Q psy7057         218 GIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSD-D-------GIVRVFSAN  271 (557)
Q Consensus       218 g~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~-D-------G~IrvW~~~  271 (557)
                      ..|-|=.+.++.......   ..++...+.+.|.......+++. |       |.+++|-+.
T Consensus       253 h~IDIA~vetGd~~~eI~---~~~~t~tVAWHPk~~LLAyA~ddk~~d~~reag~vKiFG~~  311 (313)
T KOG1407|consen  253 HFIDIAEVETGDRVWEIP---CEGPTFTVAWHPKRPLLAYACDDKDGDSNREAGTVKIFGLS  311 (313)
T ss_pred             ceEEeEecccCCeEEEee---ccCCceeEEecCCCceeeEEecCCCCccccccceeEEecCC
Confidence            999999998887654332   34556778888888776556542 2       678888654

>KOG0268|consensus

Probab=99.93  E-value=1.1e-24  Score=209.17  Aligned_cols=264  Identities=19%  Similarity=0.269  Sum_probs=208.8

Q ss_pred             EEEeccCcccEEEEEEcCCCc--EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEEC
Q psy7057           5 STALYGHSMDVRSLSVTPDGC--ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCL   66 (557)
Q Consensus         5 ~~~l~gH~~~V~~l~~spdg~--l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~   66 (557)
                      +..|.||.+.|.|++=+|...  ++||+.||.|+|||+..                +..+  ...+++++.|++|+.|.+
T Consensus        59 v~~L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~--~~~~~tvgdDKtvK~wk~  136 (433)
T KOG0268|consen   59 VGSLDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVT--QTSFFTVGDDKTVKQWKI  136 (433)
T ss_pred             hhhccccccccchhhcCcchhhhhhccccCceEEEEehhhhhhhheeecccCceeeEEec--ccceEEecCCcceeeeec
Confidence            567899999999999999863  89999999999999987                2333  267899999999999998


Q ss_pred             CCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe--EEEEECCCeE
Q psy7057          67 ESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD--FVSCSNDASI  142 (557)
Q Consensus        67 ~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~--lvs~s~Dg~I  142 (557)
                      +. .++.++.+ ...+..+.-+..+ .++|++.  .|.||| ....++..+.--.+.|.++.++|-..  |++|..|+.|
T Consensus       137 ~~-~p~~tilg-~s~~~gIdh~~~~~~FaTcGe--~i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~~sDrsI  212 (433)
T KOG0268|consen  137 DG-PPLHTILG-KSVYLGIDHHRKNSVFATCGE--QIDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILASCASDRSI  212 (433)
T ss_pred             cC-Ccceeeec-cccccccccccccccccccCc--eeeecccccCCccceeecCCCceeEEecCCCcchheeeeccCCce
Confidence            65 46666653 4455666655544 7777765  588999 45678888887788999999999744  6688899999


Q ss_pred             EEEECCCCeEEEEEeCCCCcEEEEEEcCC--EEEEEeCCCeEEEEECCCC----ceEeeCCccEEEEEEcCCCc-EEEEE
Q psy7057         143 RVWDSTTGKCVHTMYGHPNFIYSVAAHGD--LITSGGEDQCVCVYQNKAQ----NSFMIPAMSVWAVAILPNSD-IVTGS  215 (557)
Q Consensus       143 ~vwd~~~~~~~~~~~~h~~~V~~l~~~~~--~l~s~s~Dg~I~iwd~~~~----~~~~~~~~~v~~v~~~p~g~-l~sg~  215 (557)
                      .+||++++++++... -.-....|+|+++  .++++++|..++.||++..    .....|.+.|.+|.|+|-|+ |++||
T Consensus       213 vLyD~R~~~Pl~KVi-~~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfsptG~Efvsgs  291 (433)
T KOG0268|consen  213 VLYDLRQASPLKKVI-LTMRTNTICWNPEAFNFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFSPTGQEFVSGS  291 (433)
T ss_pred             EEEecccCCccceee-eeccccceecCccccceeeccccccceehhhhhhcccchhhcccceeEEEeccCCCcchhcccc
Confidence            999999999887764 3445567888554  6899999999999997655    56677888999999999999 99999


Q ss_pred             cCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCChhhH
Q psy7057         216 SDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQAE  277 (557)
Q Consensus       216 ~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~~~~~  277 (557)
                      -|.+||||..+.+...... ...-...|.++.+..+.. +++|||.|+.||+|.....+.+.
T Consensus       292 yDksIRIf~~~~~~SRdiY-htkRMq~V~~Vk~S~Dsk-yi~SGSdd~nvRlWka~Aseklg  351 (433)
T KOG0268|consen  292 YDKSIRIFPVNHGHSRDIY-HTKRMQHVFCVKYSMDSK-YIISGSDDGNVRLWKAKASEKLG  351 (433)
T ss_pred             ccceEEEeecCCCcchhhh-hHhhhheeeEEEEecccc-EEEecCCCcceeeeecchhhhcC
Confidence            9999999999876554332 222345677777766655 58999999999999987766544

>PTZ00421 coronin; Provisional

Probab=99.92  E-value=5.1e-23  Score=218.93  Aligned_cols=247  Identities=18%  Similarity=0.154  Sum_probs=180.2

Q ss_pred             CcccEEEEEEcCCCc-EEEEECCCcEEEEcCCCCCCCCCCCEEEEEECCCeEEEEECCCCeEE---EEEcccCCcEEEEE
Q psy7057          11 HSMDVRSLSVTPDGC-ILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCLESQQCK---LTIRQHEMAVWGVI   86 (557)
Q Consensus        11 H~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~---~~l~~h~~~V~~l~   86 (557)
                      |-..|+....++++. +++++.+..+..|+...                +...++.-+.|+..   ..+.+|...|.+++
T Consensus        19 ~~~~i~~~~~~~d~~~~~~~n~~~~a~~w~~~g----------------g~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~   82 (493)
T PTZ00421         19 HFLNVTPSTALWDCSNTIACNDRFIAVPWQQLG----------------STAVLKHTDYGKLASNPPILLGQEGPIIDVA   82 (493)
T ss_pred             ceeccccccccCCCCCcEeECCceEEEEEecCC----------------ceEEeeccccccCCCCCceEeCCCCCEEEEE
Confidence            345566667777855 88888888888886431                12223333333322   34789999999999


Q ss_pred             EcC-CC-EEEEEECCCeEEEEeCCC--------cEEEEEeCCCCCEEEEEEeCCC--eEEEEECCCeEEEEECCCCeEEE
Q psy7057          87 QLA-NG-IIVTGCADKTIKLHSEEG--------EFLKTLTGHTDCVRGLAVLNDT--DFVSCSNDASIRVWDSTTGKCVH  154 (557)
Q Consensus        87 ~~~-~~-~l~sgs~dg~I~vwd~~~--------~~~~~l~~h~~~V~~l~~~~~~--~lvs~s~Dg~I~vwd~~~~~~~~  154 (557)
                      |+| ++ .|++|+.|++|++||...        .++..+.+|...|.+++|+|.+  .|++++.|++|+|||+.+++.+.
T Consensus        83 fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~  162 (493)
T PTZ00421         83 FNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVE  162 (493)
T ss_pred             EcCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEE
Confidence            999 55 899999999999999432        3567889999999999999974  47899999999999999999999


Q ss_pred             EEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC---ceEeeCCcc-EEEEEEcCCCc-EEEEE----cCCcEEEE
Q psy7057         155 TMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ---NSFMIPAMS-VWAVAILPNSD-IVTGS----SDGIVRVF  223 (557)
Q Consensus       155 ~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~-v~~v~~~p~g~-l~sg~----~Dg~I~iw  223 (557)
                      .+.+|...|.+++|  ++.+|++++.|++|++||.++.   ..+..|... +..+.|++++. +++++    .|+.|++|
T Consensus       163 ~l~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklW  242 (493)
T PTZ00421        163 VIKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLW  242 (493)
T ss_pred             EEcCCCCceEEEEEECCCCEEEEecCCCEEEEEECCCCcEEEEEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEE
Confidence            99999999999999  6789999999999999998876   345556544 44677888876 66544    47999999


Q ss_pred             ecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEe-CCCcEEEEecCCCh
Q psy7057         224 SANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVS-DDGIVRVFSANPDR  274 (557)
Q Consensus       224 d~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s-~DG~IrvW~~~~~~  274 (557)
                      |++........ ..........+.+...+...+++++ .||.||+|++..++
T Consensus       243 Dlr~~~~p~~~-~~~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~~  293 (493)
T PTZ00421        243 DTRKMASPYST-VDLDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNER  293 (493)
T ss_pred             eCCCCCCceeE-eccCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCCc
Confidence            99764422111 1111112222333333344455555 69999999998664

>PTZ00420 coronin; Provisional

Probab=99.92  E-value=7.4e-23  Score=218.90  Aligned_cols=234  Identities=13%  Similarity=0.127  Sum_probs=180.6

Q ss_pred             EEEEECCCcEEEEcCCCCCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCC-C-EEEEEECCCeEE
Q psy7057          26 ILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLAN-G-IIVTGCADKTIK  103 (557)
Q Consensus        26 l~sgs~Dg~V~iWd~~~~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~-~-~l~sgs~dg~I~  103 (557)
                      .++++.+-...+|+..            .|+.++.+++|+.....++..+.+|...|.+++|+|+ + +|++|+.|++|+
T Consensus        33 ~ia~n~~~~A~~w~~~------------gGG~~gvI~L~~~~r~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIr  100 (568)
T PTZ00420         33 GIACSSGFVAVPWEVE------------GGGLIGAIRLENQMRKPPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIR  100 (568)
T ss_pred             eEeeCCCeEEEEEEcC------------CCCceeEEEeeecCCCceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEE
Confidence            6677777778888653            3677889999998888888999999999999999996 4 999999999999


Q ss_pred             EEeCC-C--------cEEEEEeCCCCCEEEEEEeCCCe--EEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cC
Q psy7057         104 LHSEE-G--------EFLKTLTGHTDCVRGLAVLNDTD--FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HG  170 (557)
Q Consensus       104 vwd~~-~--------~~~~~l~~h~~~V~~l~~~~~~~--lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~  170 (557)
                      +||.. +        .++..+.+|...|.+++|+|++.  +++++.|++|++||+++++.+..+. |...|.+++|  +|
T Consensus       101 IWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~-~~~~V~SlswspdG  179 (568)
T PTZ00420        101 VWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQIN-MPKKLSSLKWNIKG  179 (568)
T ss_pred             EEECCCCCccccccccceEEeecCCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEe-cCCcEEEEEECCCC
Confidence            99953 2        23456789999999999999865  4689999999999999998887776 6688999999  78


Q ss_pred             CEEEEEeCCCeEEEEECCCC---ceEeeCCccEE-----EEEEcCCCc-EEEEEcCC----cEEEEecCC-CCcchhHHH
Q psy7057         171 DLITSGGEDQCVCVYQNKAQ---NSFMIPAMSVW-----AVAILPNSD-IVTGSSDG----IVRVFSANP-DRQAEDAVQ  236 (557)
Q Consensus       171 ~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~-----~v~~~p~g~-l~sg~~Dg----~I~iwd~~~-~~~~~~~~~  236 (557)
                      .+|++++.|+.|++||+++.   ..+..|...+.     ...|++++. +++++.|+    .|+|||++. ..++.....
T Consensus       180 ~lLat~s~D~~IrIwD~Rsg~~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~l  259 (568)
T PTZ00420        180 NLLSGTCVGKHMHIIDPRKQEIASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSI  259 (568)
T ss_pred             CEEEEEecCCEEEEEECCCCcEEEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEe
Confidence            89999999999999998876   45666766543     334557776 78877764    799999985 333322222


Q ss_pred             hcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCC
Q psy7057         237 AQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPD  273 (557)
Q Consensus       237 ~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~  273 (557)
                      ....+.+... +.+.....+++|+.|++||+|++..+
T Consensus       260 d~~~~~L~p~-~D~~tg~l~lsGkGD~tIr~~e~~~~  295 (568)
T PTZ00420        260 DNASAPLIPH-YDESTGLIYLIGKGDGNCRYYQHSLG  295 (568)
T ss_pred             cCCccceEEe-eeCCCCCEEEEEECCCeEEEEEccCC
Confidence            2222222222 22445666789999999999999765

>KOG0294|consensus

Probab=99.92  E-value=1.4e-23  Score=198.48  Aligned_cols=235  Identities=18%  Similarity=0.266  Sum_probs=189.4

Q ss_pred             EeccCcccEEEEEEcCCCcEEEEECCCcEEEEcCCCCCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEE
Q psy7057           7 ALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVI   86 (557)
Q Consensus         7 ~l~gH~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~   86 (557)
                      .+..|.++|++++.+                           +.++++||.|.+|+|||+.+...+..+..|.+.|+++.
T Consensus        38 ~~~aH~~sitavAVs---------------------------~~~~aSGssDetI~IYDm~k~~qlg~ll~HagsitaL~   90 (362)
T KOG0294|consen   38 AFSAHAGSITALAVS---------------------------GPYVASGSSDETIHIYDMRKRKQLGILLSHAGSITALK   90 (362)
T ss_pred             cccccccceeEEEec---------------------------ceeEeccCCCCcEEEEeccchhhhcceeccccceEEEE
Confidence            456677777777765                           67899999999999999999888899999999999999


Q ss_pred             EcCCC---EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCeEE-EEECCCeEEEEECCCCeEEEEEe-CCC
Q psy7057          87 QLANG---IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTDFV-SCSNDASIRVWDSTTGKCVHTMY-GHP  160 (557)
Q Consensus        87 ~~~~~---~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~lv-s~s~Dg~I~vwd~~~~~~~~~~~-~h~  160 (557)
                      |.+.-   .|++|+.||.|.+|+ ....++.++++|...|+.++++|.++|+ +.+.|+.+++||+-.|+.-..+. .+.
T Consensus        91 F~~~~S~shLlS~sdDG~i~iw~~~~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~L~~~  170 (362)
T KOG0294|consen   91 FYPPLSKSHLLSGSDDGHIIIWRVGSWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAFVLNLKNK  170 (362)
T ss_pred             ecCCcchhheeeecCCCcEEEEEcCCeEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhcCccceeeccCCc
Confidence            99865   899999999999999 5668899999999999999999999987 99999999999998887655443 233


Q ss_pred             CcEEEEEE--cCCEEEEEeCCCeEEEEECCCCceEeeCC--ccEEEEEEcCCCcEEEEEcCCcEEEEecCCCCcchhHHH
Q psy7057         161 NFIYSVAA--HGDLITSGGEDQCVCVYQNKAQNSFMIPA--MSVWAVAILPNSDIVTGSSDGIVRVFSANPDRQAEDAVQ  236 (557)
Q Consensus       161 ~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~--~~v~~v~~~p~g~l~sg~~Dg~I~iwd~~~~~~~~~~~~  236 (557)
                      ..  .+.|  .|++++.++.+ .|-+|.+.....+....  ..+.++.|...+.+++|+.|+.|++||.+...+  ....
T Consensus       171 at--~v~w~~~Gd~F~v~~~~-~i~i~q~d~A~v~~~i~~~~r~l~~~~l~~~~L~vG~d~~~i~~~D~ds~~~--~~~~  245 (362)
T KOG0294|consen  171 AT--LVSWSPQGDHFVVSGRN-KIDIYQLDNASVFREIENPKRILCATFLDGSELLVGGDNEWISLKDTDSDTP--LTEF  245 (362)
T ss_pred             ce--eeEEcCCCCEEEEEecc-EEEEEecccHhHhhhhhccccceeeeecCCceEEEecCCceEEEeccCCCcc--ceee
Confidence            33  2666  67777777665 57888876653332222  357788888777799999999999999987443  3455


Q ss_pred             hcccceeEEEe-ccCCCceeEEEEeCCCcEEEEecCCC
Q psy7057         237 AQYAEEVKKLK-SANEQEIGGVKVSDDGIVRVFSANPD  273 (557)
Q Consensus       237 ~~~~~~v~~l~-~~~~~~~~~vs~s~DG~IrvW~~~~~  273 (557)
                      .+|...|..+. +..+...+++|+|+||.|+||+++.+
T Consensus       246 ~AH~~RVK~i~~~~~~~~~~lvTaSSDG~I~vWd~~~~  283 (362)
T KOG0294|consen  246 LAHENRVKDIASYTNPEHEYLVTASSDGFIKVWDIDME  283 (362)
T ss_pred             ecchhheeeeEEEecCCceEEEEeccCceEEEEEcccc
Confidence            67888888887 44445567899999999999998865

>KOG0299|consensus

Probab=99.92  E-value=9.3e-24  Score=208.53  Aligned_cols=259  Identities=20%  Similarity=0.308  Sum_probs=207.7

Q ss_pred             EEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------------------------CCCCCCCC
Q psy7057           6 TALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------------------------LSPGAKVN   50 (557)
Q Consensus         6 ~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------------------------~~~~~~~~   50 (557)
                      +.+..|.-+|.||+++|+++ .++++.+++|.-|++.+                                  ++.++++.
T Consensus       136 ~~~~~H~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dgk  215 (479)
T KOG0299|consen  136 RVIGKHQLSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDGK  215 (479)
T ss_pred             eeeccccCcceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCCc
Confidence            45678999999999999998 89999999999998765                                  45667899


Q ss_pred             EEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeC-CCcEEEEEeCCCCCEEEEEEe
Q psy7057          51 TLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSE-EGEFLKTLTGHTDCVRGLAVL  128 (557)
Q Consensus        51 ~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~-~~~~~~~l~~h~~~V~~l~~~  128 (557)
                      +|++|+.|..|.||+..+.+.+..+.+|.+.|.+++|-... .+++++.|.++++|+. ....+.++.+|.+.|.+|...
T Consensus       216 ylatgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vetlyGHqd~v~~IdaL  295 (479)
T KOG0299|consen  216 YLATGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVETLYGHQDGVLGIDAL  295 (479)
T ss_pred             EEEecCCCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHHHHHHhCCccceeeechh
Confidence            99999999999999999999999999999999999998765 8999999999999994 445677899999999999998


Q ss_pred             CCCeEEE-EECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE-cCCEEEEEeCCCeEEEEECCCCceEe-----e------
Q psy7057         129 NDTDFVS-CSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA-HGDLITSGGEDQCVCVYQNKAQNSFM-----I------  195 (557)
Q Consensus       129 ~~~~lvs-~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~-~~~~l~s~s~Dg~I~iwd~~~~~~~~-----~------  195 (557)
                      .-.+.+| |+.|+++++|++. .+....+.+|.+.+-|++| +...+++||.+|.|.+|++-+.+.+.     .      
T Consensus       296 ~reR~vtVGgrDrT~rlwKi~-eesqlifrg~~~sidcv~~In~~HfvsGSdnG~IaLWs~~KKkplf~~~~AHgv~~~~  374 (479)
T KOG0299|consen  296 SRERCVTVGGRDRTVRLWKIP-EESQLIFRGGEGSIDCVAFINDEHFVSGSDNGSIALWSLLKKKPLFTSRLAHGVIPEL  374 (479)
T ss_pred             cccceEEeccccceeEEEecc-ccceeeeeCCCCCeeeEEEecccceeeccCCceEEEeeecccCceeEeeccccccCCc
Confidence            8888885 5599999999984 4445567889999999999 88899999999999999954431111     0      


Q ss_pred             ----CCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCc-chhHHHhcccceeEEEeccCCCceeEEEEeCCCcE
Q psy7057         196 ----PAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQ-AEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIV  265 (557)
Q Consensus       196 ----~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~-~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~I  265 (557)
                          +...|++++..|..+ +++|+.+|.||+|.+..+-. ......-...+-|+.+.+.......++..+..-.+
T Consensus       375 ~~~~~~~Witsla~i~~sdL~asGS~~G~vrLW~i~~g~r~i~~l~~ls~~GfVNsl~f~~sgk~ivagiGkEhRl  450 (479)
T KOG0299|consen  375 DPVNGNFWITSLAVIPGSDLLASGSWSGCVRLWKIEDGLRAINLLYSLSLVGFVNSLAFSNSGKRIVAGIGKEHRL  450 (479)
T ss_pred             cccccccceeeeEecccCceEEecCCCCceEEEEecCCccccceeeecccccEEEEEEEccCCCEEEEeccccccc
Confidence                112689999999998 77899999999999987722 11111112455667777666655444444444333

>KOG0278|consensus

Probab=99.92  E-value=1.2e-24  Score=199.30  Aligned_cols=224  Identities=21%  Similarity=0.329  Sum_probs=193.8

Q ss_pred             EEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC---------------CCCCCCCCEEEEEECCCeEEEEECCC
Q psy7057           5 STALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND---------------LSPGAKVNTLLSASWDMTAKLWCLES   68 (557)
Q Consensus         5 ~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~---------------~~~~~~~~~l~sgs~Dg~i~iwd~~~   68 (557)
                      +-+|.||.+.|++.++..+.. -++++.|=+.++||.-+               ++++.+.++|++|+.++.+||||++.
T Consensus        52 igtfeghkgavw~~~l~~na~~aasaaadftakvw~a~tgdelhsf~hkhivk~~af~~ds~~lltgg~ekllrvfdln~  131 (334)
T KOG0278|consen   52 IGTFEGHKGAVWSATLNKNATRAASAAADFTAKVWDAVTGDELHSFEHKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNR  131 (334)
T ss_pred             EEeeeccCcceeeeecCchhhhhhhhcccchhhhhhhhhhhhhhhhhhhheeeeEEecccchhhhccchHHHhhhhhccC
Confidence            468999999999999998876 67999999999999766               77888999999999999999999987


Q ss_pred             Ce-EEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCeEEEEECCCeEEEE
Q psy7057          69 QQ-CKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVW  145 (557)
Q Consensus        69 ~~-~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vw  145 (557)
                      .+ +...+.+|.+.|..+.|.... .|++.+.|++||+|| .++..++++. ...+|+++.++++|.+++....+.|++|
T Consensus       132 p~App~E~~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt~v~sL~-~~s~VtSlEvs~dG~ilTia~gssV~Fw  210 (334)
T KOG0278|consen  132 PKAPPKEISGHTGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGTEVQSLE-FNSPVTSLEVSQDGRILTIAYGSSVKFW  210 (334)
T ss_pred             CCCCchhhcCCCCcceeEEEeccCceEEeeccCCceEEEEeccCcEEEEEe-cCCCCcceeeccCCCEEEEecCceeEEe
Confidence            64 567789999999999998754 899999999999999 7888888887 5678999999999999999999999999


Q ss_pred             ECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC---ce-EeeCCccEEEEEEcCCCc-EEEEEcCC
Q psy7057         146 DSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ---NS-FMIPAMSVWAVAILPNSD-IVTGSSDG  218 (557)
Q Consensus       146 d~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~---~~-~~~~~~~v~~v~~~p~g~-l~sg~~Dg  218 (557)
                      |..+...+..++ -+..|.+.+.  +...+++|++|..++.||..+.   .. ..+|.++|.||.|+|+|. .++|++||
T Consensus       211 daksf~~lKs~k-~P~nV~SASL~P~k~~fVaGged~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSPdGE~yAsGSEDG  289 (334)
T KOG0278|consen  211 DAKSFGLLKSYK-MPCNVESASLHPKKEFFVAGGEDFKVYKFDYNTGEEIGSYNKGHFGPVHCVRFSPDGELYASGSEDG  289 (334)
T ss_pred             ccccccceeecc-CccccccccccCCCceEEecCcceEEEEEeccCCceeeecccCCCCceEEEEECCCCceeeccCCCc
Confidence            999988888776 4555666565  4468999999999999996655   23 367889999999999999 88999999


Q ss_pred             cEEEEecCCCCc
Q psy7057         219 IVRVFSANPDRQ  230 (557)
Q Consensus       219 ~I~iwd~~~~~~  230 (557)
                      +||||.....+.
T Consensus       290 TirlWQt~~~~~  301 (334)
T KOG0278|consen  290 TIRLWQTTPGKT  301 (334)
T ss_pred             eEEEEEecCCCc
Confidence            999999876653

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.92  E-value=6.9e-23  Score=233.47  Aligned_cols=214  Identities=20%  Similarity=0.298  Sum_probs=180.0

Q ss_pred             CcccEEEEEEcCC-Cc-EEEEECCCcEEEEcCCC----------------CCCCC-CCCEEEEEECCCeEEEEECCCCeE
Q psy7057          11 HSMDVRSLSVTPD-GC-ILSASRDKSAKLWKPND----------------LSPGA-KVNTLLSASWDMTAKLWCLESQQC   71 (557)
Q Consensus        11 H~~~V~~l~~spd-g~-l~sgs~Dg~V~iWd~~~----------------~~~~~-~~~~l~sgs~Dg~i~iwd~~~~~~   71 (557)
                      +...|.+++|++. +. |++++.||+|++||+.+                +.+++ ++.+|++|+.|++|++||+.++.+
T Consensus       531 ~~~~v~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~  610 (793)
T PLN00181        531 SRSKLSGICWNSYIKSQVASSNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVS  610 (793)
T ss_pred             ccCceeeEEeccCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcE
Confidence            3468999999885 44 89999999999999875                45554 678999999999999999999998


Q ss_pred             EEEEcccCCcEEEEEEcC-CC-EEEEEECCCeEEEEeCC-Cc-EEEEEeCCCCCEEEEEEeCCCeEEEEECCCeEEEEEC
Q psy7057          72 KLTIRQHEMAVWGVIQLA-NG-IIVTGCADKTIKLHSEE-GE-FLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDS  147 (557)
Q Consensus        72 ~~~l~~h~~~V~~l~~~~-~~-~l~sgs~dg~I~vwd~~-~~-~~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~  147 (557)
                      +..+..+ ..|+++.|.+ ++ .|++|+.|+.|++||.. .. ++..+.+|...|.++.|.+...|++++.|++|++||+
T Consensus       611 ~~~~~~~-~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~~~~~lvs~s~D~~ikiWd~  689 (793)
T PLN00181        611 IGTIKTK-ANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFVDSSTLVSSSTDNTLKLWDL  689 (793)
T ss_pred             EEEEecC-CCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEecCCCCCEEEEEEeCCCEEEEEECCCEEEEEeC
Confidence            8888754 6799999965 45 99999999999999954 33 5677889999999999986677899999999999998


Q ss_pred             CC------CeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCCce----------------EeeCCccEEEE
Q psy7057         148 TT------GKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQNS----------------FMIPAMSVWAV  203 (557)
Q Consensus       148 ~~------~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~~~----------------~~~~~~~v~~v  203 (557)
                      +.      .+++.++.+|...+.++++  ++.+|++|+.|+.|++|+......                ...+...|.++
T Consensus       690 ~~~~~~~~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs~D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~V~~v  769 (793)
T PLN00181        690 SMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSGLEVDDASQFISSV  769 (793)
T ss_pred             CCCccccCCcceEEEcCCCCCeeEEEEcCCCCEEEEEeCCCEEEEEECCCCCceEEEecccCCcccccccCCCCcEEEEE
Confidence            74      3678899999999999888  678999999999999999643311                12234569999


Q ss_pred             EEcCCCc-EEEEEcCCcEEEEec
Q psy7057         204 AILPNSD-IVTGSSDGIVRVFSA  225 (557)
Q Consensus       204 ~~~p~g~-l~sg~~Dg~I~iwd~  225 (557)
                      +|+|++. +++|+.||.|+||++
T Consensus       770 ~ws~~~~~lva~~~dG~I~i~~~  792 (793)
T PLN00181        770 CWRGQSSTLVAANSTGNIKILEM  792 (793)
T ss_pred             EEcCCCCeEEEecCCCcEEEEec
Confidence            9999998 899999999999986

>KOG0308|consensus

Probab=99.92  E-value=5.8e-24  Score=217.46  Aligned_cols=261  Identities=22%  Similarity=0.364  Sum_probs=203.1

Q ss_pred             cCcccEE---EEEEcC-CCc-EEEEECCCcEEEEcCCC----------------------CCCCCCCCEEEEEECCCeEE
Q psy7057          10 GHSMDVR---SLSVTP-DGC-ILSASRDKSAKLWKPND----------------------LSPGAKVNTLLSASWDMTAK   62 (557)
Q Consensus        10 gH~~~V~---~l~~sp-dg~-l~sgs~Dg~V~iWd~~~----------------------~~~~~~~~~l~sgs~Dg~i~   62 (557)
                      .|...|.   .+..+. .++ |+||++||.|++|+...                      +.....++.|+++|.|-+|+
T Consensus        19 qn~~~v~~~~~Lq~da~~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK   98 (735)
T KOG0308|consen   19 QNRNGVNITKALQLDAPNGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASSDTTVK   98 (735)
T ss_pred             hccccccchhhccccCCCCceEEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecCCceEE
Confidence            3555555   444443 456 99999999999998765                      33334578999999999999


Q ss_pred             EEECCCC--eEEEEEcccCCcEEEEEE-cCCC-EEEEEECCCeEEEEeCCCc---E--------EEEEe-CCCCCEEEEE
Q psy7057          63 LWCLESQ--QCKLTIRQHEMAVWGVIQ-LANG-IIVTGCADKTIKLHSEEGE---F--------LKTLT-GHTDCVRGLA  126 (557)
Q Consensus        63 iwd~~~~--~~~~~l~~h~~~V~~l~~-~~~~-~l~sgs~dg~I~vwd~~~~---~--------~~~l~-~h~~~V~~l~  126 (557)
                      +|+...+  -++.++..|.+.|.|+++ -++. ++++|+.|+.|.+||.+..   .        ...+. ++..+|.+++
T Consensus        99 ~W~~~~~~~~c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA  178 (735)
T KOG0308|consen   99 VWNAHKDNTFCMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLA  178 (735)
T ss_pred             EeecccCcchhHhhhhcccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeee
Confidence            9999877  578889999999999999 4555 9999999999999994421   1        22333 7889999999


Q ss_pred             EeCCCe-EEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC---ceEeeCCccE
Q psy7057         127 VLNDTD-FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSV  200 (557)
Q Consensus       127 ~~~~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v  200 (557)
                      ..+.+. |++|+..+.|++||.++.+.+..+++|+..|+++..  +|..++++|.||+|++||++.+   .++..|...|
T Consensus       179 ~N~t~t~ivsGgtek~lr~wDprt~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl~T~~vH~e~V  258 (735)
T KOG0308|consen  179 MNQTGTIIVSGGTEKDLRLWDPRTCKKIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRCLATYIVHKEGV  258 (735)
T ss_pred             cCCcceEEEecCcccceEEeccccccceeeeeccccceEEEEEcCCCCeEeecCCCceEEeeeccccceeeeEEeccCce
Confidence            999887 669999999999999999999999999999999998  7889999999999999998866   6778899999


Q ss_pred             EEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEecc-CCCceeEEEEeCCCcEEEEecCCCh
Q psy7057         201 WAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSA-NEQEIGGVKVSDDGIVRVFSANPDR  274 (557)
Q Consensus       201 ~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~-~~~~~~~vs~s~DG~IrvW~~~~~~  274 (557)
                      |++..+|+-. +.+|+.||.|..=++.+........  ....++..+... +.++  +=+++.|+.|+-|...+.-
T Consensus       259 WaL~~~~sf~~vYsG~rd~~i~~Tdl~n~~~~tlic--k~daPv~~l~~~~~~~~--~WvtTtds~I~rW~~~~~~  330 (735)
T KOG0308|consen  259 WALQSSPSFTHVYSGGRDGNIYRTDLRNPAKSTLIC--KEDAPVLKLHLHEHDNS--VWVTTTDSSIKRWKLEPDI  330 (735)
T ss_pred             EEEeeCCCcceEEecCCCCcEEecccCCchhheEee--cCCCchhhhhhccccCC--ceeeeccccceecCCcccc
Confidence            9999999877 9999999999999988742211000  001111111111 1111  2456789999999877653

>PTZ00421 coronin; Provisional

Probab=99.92  E-value=9.4e-23  Score=216.94  Aligned_cols=205  Identities=17%  Similarity=0.280  Sum_probs=159.8

Q ss_pred             EeccCcccEEEEEEcC-CCc-EEEEECCCcEEEEcCCCCCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEE
Q psy7057           7 ALYGHSMDVRSLSVTP-DGC-ILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWG   84 (557)
Q Consensus         7 ~l~gH~~~V~~l~~sp-dg~-l~sgs~Dg~V~iWd~~~~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~   84 (557)
                      .|.||.+.|++++|+| ++. |++|+.|++|++||+..-...                   ....+++..+.+|...|.+
T Consensus        70 ~l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~-------------------~~~~~~l~~L~gH~~~V~~  130 (493)
T PTZ00421         70 ILLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLT-------------------QNISDPIVHLQGHTKKVGI  130 (493)
T ss_pred             eEeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccc-------------------cccCcceEEecCCCCcEEE
Confidence            4789999999999999 665 778888888888877531000                   0012456788999999999


Q ss_pred             EEEcCCC--EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEEEEECCCCeEEEEEeCCC
Q psy7057          85 VIQLANG--IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHTMYGHP  160 (557)
Q Consensus        85 l~~~~~~--~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h~  160 (557)
                      ++|+|.+  .|++|+.|++|++|| .++..+..+.+|...|.+++|+|++. |++++.|++|++||+++++.+.++.+|.
T Consensus       131 l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~  210 (493)
T PTZ00421        131 VSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHA  210 (493)
T ss_pred             EEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcCCCCceEEEEEECCCCEEEEecCCCEEEEEECCCCcEEEEEecCC
Confidence            9999964  899999999999999 45677888899999999999999976 7799999999999999999999999997


Q ss_pred             CcE-EEEEE--cCCEEEEEe----CCCeEEEEECCCC-ceE---eeC-CccEEEEEEcCCCc-EEEEE-cCCcEEEEecC
Q psy7057         161 NFI-YSVAA--HGDLITSGG----EDQCVCVYQNKAQ-NSF---MIP-AMSVWAVAILPNSD-IVTGS-SDGIVRVFSAN  226 (557)
Q Consensus       161 ~~V-~~l~~--~~~~l~s~s----~Dg~I~iwd~~~~-~~~---~~~-~~~v~~v~~~p~g~-l~sg~-~Dg~I~iwd~~  226 (557)
                      ..+ ..+.|  ++..+++++    .|+.|++||++.. ..+   ..+ ...+....|++++. +++++ .|+.|++|++.
T Consensus       211 ~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~  290 (493)
T PTZ00421        211 SAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELM  290 (493)
T ss_pred             CCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCCceeEeccCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEee
Confidence            653 34455  445666554    4799999998764 222   222 23466677899988 66666 59999999998


Q ss_pred             CCCc
Q psy7057         227 PDRQ  230 (557)
Q Consensus       227 ~~~~  230 (557)
                      .+..
T Consensus       291 ~~~~  294 (493)
T PTZ00421        291 NERL  294 (493)
T ss_pred             CCce
Confidence            7653

>KOG0264|consensus

Probab=99.92  E-value=1.2e-23  Score=207.97  Aligned_cols=247  Identities=17%  Similarity=0.267  Sum_probs=196.0

Q ss_pred             cCcccEEEEEEcCCCc--EEEEECCCcEEEEcCCCCCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEE
Q psy7057          10 GHSMDVRSLSVTPDGC--ILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQ   87 (557)
Q Consensus        10 gH~~~V~~l~~spdg~--l~sgs~Dg~V~iWd~~~~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~   87 (557)
                      -|.+.|+.+..-|+..  +++.+..+.|.|||...-.-.+.    .++            .-.+..+|.+|...-.+++|
T Consensus       122 ~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~----~~~------------~~~Pdl~L~gH~~eg~glsW  185 (422)
T KOG0264|consen  122 NHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPK----ASG------------ECRPDLRLKGHEKEGYGLSW  185 (422)
T ss_pred             cCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCccc----ccc------------cCCCceEEEeeccccccccc
Confidence            3788888888888765  44556666677776554111100    000            11344578888887788999


Q ss_pred             cCCC--EEEEEECCCeEEEEeCCC--------cEEEEEeCCCCCEEEEEEeCCC--eEEEEECCCeEEEEECC--CCeEE
Q psy7057          88 LANG--IIVTGCADKTIKLHSEEG--------EFLKTLTGHTDCVRGLAVLNDT--DFVSCSNDASIRVWDST--TGKCV  153 (557)
Q Consensus        88 ~~~~--~l~sgs~dg~I~vwd~~~--------~~~~~l~~h~~~V~~l~~~~~~--~lvs~s~Dg~I~vwd~~--~~~~~  153 (557)
                      ++..  .+++++.|++|++||++.        .+...+.+|.+.|..++|++-.  .|.+++.|+.+.|||+|  +.++.
T Consensus       186 n~~~~g~Lls~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~  265 (422)
T KOG0264|consen  186 NRQQEGTLLSGSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPS  265 (422)
T ss_pred             ccccceeEeeccCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCc
Confidence            9854  999999999999999432        2356778999999999999874  47899999999999999  56677


Q ss_pred             EEEeCCCCcEEEEEE---cCCEEEEEeCCCeEEEEECCCC----ceEeeCCccEEEEEEcCCCc--EEEEEcCCcEEEEe
Q psy7057         154 HTMYGHPNFIYSVAA---HGDLITSGGEDQCVCVYQNKAQ----NSFMIPAMSVWAVAILPNSD--IVTGSSDGIVRVFS  224 (557)
Q Consensus       154 ~~~~~h~~~V~~l~~---~~~~l~s~s~Dg~I~iwd~~~~----~~~~~~~~~v~~v~~~p~g~--l~sg~~Dg~I~iwd  224 (557)
                      ....+|++.|.|++|   ++..|++||.|++|++||++..    ..+..|...|..|.|+|+..  +++++.|+.+.|||
T Consensus       266 ~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWD  345 (422)
T KOG0264|consen  266 HSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWD  345 (422)
T ss_pred             ccccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEe
Confidence            788899999999999   5568999999999999998866    67788999999999999987  88999999999999


Q ss_pred             cCCCCcc------------hhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCC
Q psy7057         225 ANPDRQA------------EDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANP  272 (557)
Q Consensus       225 ~~~~~~~------------~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~  272 (557)
                      +..-...            ..+.+.+|...|..+.+.+..+..++|++.|+.+.||....
T Consensus       346 ls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s~  405 (422)
T KOG0264|consen  346 LSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMAE  405 (422)
T ss_pred             ccccccccChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeeccc
Confidence            8643221            12456778888999999999999999999999999998763

>KOG0282|consensus

Probab=99.92  E-value=7.5e-25  Score=217.42  Aligned_cols=223  Identities=20%  Similarity=0.293  Sum_probs=188.9

Q ss_pred             cEEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC---------------CCCCCCC-CEEEEEECCCeEEEE
Q psy7057           2 YKLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND---------------LSPGAKV-NTLLSASWDMTAKLW   64 (557)
Q Consensus         2 ~kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~---------------~~~~~~~-~~l~sgs~Dg~i~iw   64 (557)
                      .++++++.||..+|++++|+++|. ++|+|.|+.|++||+++               +.+.|++ +.+++|+.|+.|+.|
T Consensus       248 ~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDtETG~~~~~f~~~~~~~cvkf~pd~~n~fl~G~sd~ki~~w  327 (503)
T KOG0282|consen  248 RRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKLWDTETGQVLSRFHLDKVPTCVKFHPDNQNIFLVGGSDKKIRQW  327 (503)
T ss_pred             cceehhhhcchhhhhhhhccccCCeeeeeecceeeeeeccccceEEEEEecCCCceeeecCCCCCcEEEEecCCCcEEEE
Confidence            568899999999999999999998 99999999999999998               5677777 899999999999999


Q ss_pred             ECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCC-CcEEEEE-eCCCCCEEEEEEeCCCe-EEEEECCC
Q psy7057          65 CLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEE-GEFLKTL-TGHTDCVRGLAVLNDTD-FVSCSNDA  140 (557)
Q Consensus        65 d~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~-~~~~~~l-~~h~~~V~~l~~~~~~~-lvs~s~Dg  140 (557)
                      |+++++.+..+..|-+.|..+.|.++| .+++.+.|++++||+.. ..++... ..+.....|+..+|++. +++-+.|.
T Consensus       328 DiRs~kvvqeYd~hLg~i~~i~F~~~g~rFissSDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN  407 (503)
T KOG0282|consen  328 DIRSGKVVQEYDRHLGAILDITFVDEGRRFISSSDDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQSMDN  407 (503)
T ss_pred             eccchHHHHHHHhhhhheeeeEEccCCceEeeeccCccEEEEEcCCCccchhhcchhhccCcceecCCCCCeehhhccCc
Confidence            999999999999999999999999999 99999999999999943 3333222 23334567888899977 56888999


Q ss_pred             eEEEEECCCC---eEEEEEeCCCCcEE--EEEE--cCCEEEEEeCCCeEEEEECCCC---ceEeeCCccEEEEEEcCCCc
Q psy7057         141 SIRVWDSTTG---KCVHTMYGHPNFIY--SVAA--HGDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVAILPNSD  210 (557)
Q Consensus       141 ~I~vwd~~~~---~~~~~~~~h~~~V~--~l~~--~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p~g~  210 (557)
                      .|.++.+...   .....+.+|...-+  .+.|  +|.+|++|+.||.+.+||.++.   ..+..|..++..+.|+|...
T Consensus       408 ~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpDG~~l~SGdsdG~v~~wdwkt~kl~~~lkah~~~ci~v~wHP~e~  487 (503)
T KOG0282|consen  408 YIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPDGRTLCSGDSDGKVNFWDWKTTKLVSKLKAHDQPCIGVDWHPVEP  487 (503)
T ss_pred             eEEEEecccccccCHhhhhcceeccCceeeEEEcCCCCeEEeecCCccEEEeechhhhhhhccccCCcceEEEEecCCCc
Confidence            9999986532   23456778865444  4445  8899999999999999998776   77888999999999999876


Q ss_pred             --EEEEEcCCcEEEEe
Q psy7057         211 --IVTGSSDGIVRVFS  224 (557)
Q Consensus       211 --l~sg~~Dg~I~iwd  224 (557)
                        +++|+.||.|++|+
T Consensus       488 Skvat~~w~G~Ikiwd  503 (503)
T KOG0282|consen  488 SKVATCGWDGLIKIWD  503 (503)
T ss_pred             ceeEecccCceeEecC
Confidence              99999999999996

>KOG0640|consensus

Probab=99.91  E-value=1.4e-23  Score=197.75  Aligned_cols=264  Identities=20%  Similarity=0.259  Sum_probs=205.0

Q ss_pred             EEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------------------------CCCCCCCC
Q psy7057           6 TALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------------------------LSPGAKVN   50 (557)
Q Consensus         6 ~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------------------------~~~~~~~~   50 (557)
                      ..+..|.+++++.+|+|||. ++|||.|.+|+|.|+..                                  +.++|...
T Consensus       106 ~ylt~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre~  185 (430)
T KOG0640|consen  106 KYLTSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRET  185 (430)
T ss_pred             EEEeecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchhh
Confidence            45788999999999999999 77999999999999873                                  78889999


Q ss_pred             EEEEEECCCeEEEEECCCCeEEEE--EcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeC-CCcEEEEE---eCCCCCEE
Q psy7057          51 TLLSASWDMTAKLWCLESQQCKLT--IRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSE-EGEFLKTL---TGHTDCVR  123 (557)
Q Consensus        51 ~l~sgs~Dg~i~iwd~~~~~~~~~--l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~-~~~~~~~l---~~h~~~V~  123 (557)
                      .|++|+.|++|++||.......+.  ......+|.++.|+|.| +|+.|..-.++++||. +.++...-   ..|++.|+
T Consensus       186 ILiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~QcfvsanPd~qht~ai~  265 (430)
T KOG0640|consen  186 ILISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSANPDDQHTGAIT  265 (430)
T ss_pred             eEEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccceeEeeecCccccccccee
Confidence            999999999999999865432221  22246789999999999 8889999999999994 33443322   46999999


Q ss_pred             EEEEeCCCe-EEEEECCCeEEEEECCCCeEEEEEe-CCC-CcEEEEEE--cCCEEEEEeCCCeEEEEECCCCceEeeCCc
Q psy7057         124 GLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHTMY-GHP-NFIYSVAA--HGDLITSGGEDQCVCVYQNKAQNSFMIPAM  198 (557)
Q Consensus       124 ~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~-~h~-~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~  198 (557)
                      ++.+++.+. ++++|.||.|++||--+++|+.++. .|. ..|++..|  +++++++.+.|..+++|.+.+.+.+....+
T Consensus       266 ~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~R~l~~YtG  345 (430)
T KOG0640|consen  266 QVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEISTGRMLKEYTG  345 (430)
T ss_pred             EEEecCCccEEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCeEEeecCCcceeeeeeecCCceEEEEec
Confidence            999999987 6699999999999988999999986 464 57888888  889999999999999999887754443221


Q ss_pred             --------cEEEEEEcCCCcEE-EE-EcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEE
Q psy7057         199 --------SVWAVAILPNSDIV-TG-SSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVF  268 (557)
Q Consensus       199 --------~v~~v~~~p~g~l~-sg-~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW  268 (557)
                              .-+...|....+++ .- -..+.+.-||.++........ -+|.+.+..+...|..+ .+++||.|-.+|+|
T Consensus       346 Ag~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtadr~~l~s-lgHn~a~R~i~HSP~~p-~FmTcsdD~raRFW  423 (430)
T KOG0640|consen  346 AGTTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTADRVALLS-LGHNGAVRWIVHSPVEP-AFMTCSDDFRARFW  423 (430)
T ss_pred             CCcccchhhhhhhhhcCccceEEccccccCceeeccccchhhhhhcc-cCCCCCceEEEeCCCCC-ceeeecccceeeee
Confidence                    12334455555532 22 235678889988765543333 35777777777666655 58999999999999


Q ss_pred             ecC
Q psy7057         269 SAN  271 (557)
Q Consensus       269 ~~~  271 (557)
                      -..
T Consensus       424 yrr  426 (430)
T KOG0640|consen  424 YRR  426 (430)
T ss_pred             eec
Confidence            754

>PTZ00420 coronin; Provisional

Probab=99.91  E-value=4e-22  Score=213.32  Aligned_cols=206  Identities=12%  Similarity=0.120  Sum_probs=149.1

Q ss_pred             EEEeccCcccEEEEEEcCC-Cc-EEEEECCCcEEEEcCCCCCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcE
Q psy7057           5 STALYGHSMDVRSLSVTPD-GC-ILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAV   82 (557)
Q Consensus         5 ~~~l~gH~~~V~~l~~spd-g~-l~sgs~Dg~V~iWd~~~~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V   82 (557)
                      ...|.+|.+.|.+++|+|+ +. |+||+.|++|+|||+.+-      ....          -  ....++..+.+|...|
T Consensus        67 v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~------~~~~----------~--~i~~p~~~L~gH~~~V  128 (568)
T PTZ00420         67 VIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHN------DESV----------K--EIKDPQCILKGHKKKI  128 (568)
T ss_pred             EEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCC------Cccc----------c--ccccceEEeecCCCcE
Confidence            4567888888999999886 34 677777777777776431      0000          0  0013455678899999


Q ss_pred             EEEEEcCCC--EEEEEECCCeEEEEeC-CCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEEEEECCCCeEEEEEeC
Q psy7057          83 WGVIQLANG--IIVTGCADKTIKLHSE-EGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHTMYG  158 (557)
Q Consensus        83 ~~l~~~~~~--~l~sgs~dg~I~vwd~-~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~  158 (557)
                      .+++|+|++  .+++++.|++|++||. ++..+..+. |...|.+++|+++|. |++++.|++|+|||+++++.+.++.+
T Consensus       129 ~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~-~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~tl~g  207 (568)
T PTZ00420        129 SIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQIN-MPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASSFHI  207 (568)
T ss_pred             EEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEe-cCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence            999999977  5679999999999995 455555565 667899999999987 55788899999999999999999999


Q ss_pred             CCCcEEEEE-----E--cCCEEEEEeCCC----eEEEEECCCC-c---eEee--CCccEEEEEEcCCCc-EEEEEcCCcE
Q psy7057         159 HPNFIYSVA-----A--HGDLITSGGEDQ----CVCVYQNKAQ-N---SFMI--PAMSVWAVAILPNSD-IVTGSSDGIV  220 (557)
Q Consensus       159 h~~~V~~l~-----~--~~~~l~s~s~Dg----~I~iwd~~~~-~---~~~~--~~~~v~~v~~~p~g~-l~sg~~Dg~I  220 (557)
                      |.+.+.+..     +  ++.+|++++.|+    +|++||++.. .   .+..  ....+......+++. +++|+.|++|
T Consensus       208 H~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D~~tg~l~lsGkGD~tI  287 (568)
T PTZ00420        208 HDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYDESTGLIYLIGKGDGNC  287 (568)
T ss_pred             ccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEeeeCCCCCEEEEEECCCeE
Confidence            987653322     2  456888887764    7999998753 2   2211  122222333344566 7789999999


Q ss_pred             EEEecCCCC
Q psy7057         221 RVFSANPDR  229 (557)
Q Consensus       221 ~iwd~~~~~  229 (557)
                      |+|++..+.
T Consensus       288 r~~e~~~~~  296 (568)
T PTZ00420        288 RYYQHSLGS  296 (568)
T ss_pred             EEEEccCCc
Confidence            999997653

>KOG0772|consensus

Probab=99.91  E-value=4.9e-23  Score=205.52  Aligned_cols=263  Identities=19%  Similarity=0.198  Sum_probs=200.2

Q ss_pred             EEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC---------------------CCCCCCCCEEEEEECCCeE
Q psy7057           4 LSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND---------------------LSPGAKVNTLLSASWDMTA   61 (557)
Q Consensus         4 l~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~---------------------~~~~~~~~~l~sgs~Dg~i   61 (557)
                      ....|++|+..|+++++.|.|. |+|||.|-+|++||++.                     +.+++.++.|++.+....+
T Consensus       159 hEi~l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~aqa  238 (641)
T KOG0772|consen  159 HEIQLKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSGSAQA  238 (641)
T ss_pred             ceEeccCCceEEEEeeecCCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEecCcce
Confidence            3457899999999999999997 99999999999999986                     6778889999999999999


Q ss_pred             EEEECCCCeEEE------------EEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEeCCC--cEEEEEe-----CCCC
Q psy7057          62 KLWCLESQQCKL------------TIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHSEEG--EFLKTLT-----GHTD  120 (557)
Q Consensus        62 ~iwd~~~~~~~~------------~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~~~--~~~~~l~-----~h~~  120 (557)
                      +|+|-...+...            ..++|...++|.+|+|..  .++|++.||++|+|+...  +.+..++     +-.-
T Consensus       239 kl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv  318 (641)
T KOG0772|consen  239 KLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRV  318 (641)
T ss_pred             eEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCccc
Confidence            999965433322            236799999999999976  899999999999999432  2233332     3345


Q ss_pred             CEEEEEEeCCCe-EEEEECCCeEEEEECCCCe--E-EEEEeCCCC--cEEEEEE--cCCEEEEEeCCCeEEEEECCCC-c
Q psy7057         121 CVRGLAVLNDTD-FVSCSNDASIRVWDSTTGK--C-VHTMYGHPN--FIYSVAA--HGDLITSGGEDQCVCVYQNKAQ-N  191 (557)
Q Consensus       121 ~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~--~-~~~~~~h~~--~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~-~  191 (557)
                      ++++++|++++. |++|+.||.|.+|+.....  + ...-..|..  .|+||+|  +|++|++-+.|+++++||++.. +
T Consensus       319 ~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~kk  398 (641)
T KOG0772|consen  319 PVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFKK  398 (641)
T ss_pred             CceeeecCCCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeecccccc
Confidence            789999999987 6699999999999975432  2 233346766  8999999  8999999999999999998876 3


Q ss_pred             eEeeC-----CccEEEEEEcCCCc-EEEEEc------CCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEE
Q psy7057         192 SFMIP-----AMSVWAVAILPNSD-IVTGSS------DGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKV  259 (557)
Q Consensus       192 ~~~~~-----~~~v~~v~~~p~g~-l~sg~~------Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~  259 (557)
                      .+...     ..+-+.++|+|+.+ |++|.+      .|++.+||..+-.........  ..++..+.|++.- +.++.+
T Consensus       399 pL~~~tgL~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~i~--~aSvv~~~WhpkL-NQi~~g  475 (641)
T KOG0772|consen  399 PLNVRTGLPTPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLDTVYKIDIS--TASVVRCLWHPKL-NQIFAG  475 (641)
T ss_pred             chhhhcCCCccCCCCccccCCCceEEEecccccCCCCCceEEEEeccceeeEEEecCC--CceEEEEeecchh-hheeee
Confidence            32221     22457899999999 666654      577999988765543322222  3445555555543 346889


Q ss_pred             eCCCcEEEEe
Q psy7057         260 SDDGIVRVFS  269 (557)
Q Consensus       260 s~DG~IrvW~  269 (557)
                      +.||+++|+=
T Consensus       476 sgdG~~~vyY  485 (641)
T KOG0772|consen  476 SGDGTAHVYY  485 (641)
T ss_pred             cCCCceEEEE
Confidence            9999999973

>KOG1036|consensus

Probab=99.91  E-value=1.3e-22  Score=191.56  Aligned_cols=225  Identities=20%  Similarity=0.284  Sum_probs=180.1

Q ss_pred             CCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCCEEEEEECCCeEEEEeCCCcEEEEEeCCCCCEEEEEEe
Q psy7057          49 VNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVL  128 (557)
Q Consensus        49 ~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~  128 (557)
                      .+.|++++|||++++|+.........+. |..++.+++|.++..+++|+.||.|+.+|+.......+..|..+|+||..+
T Consensus        25 ~~~LLvssWDgslrlYdv~~~~l~~~~~-~~~plL~c~F~d~~~~~~G~~dg~vr~~Dln~~~~~~igth~~~i~ci~~~  103 (323)
T KOG1036|consen   25 SSDLLVSSWDGSLRLYDVPANSLKLKFK-HGAPLLDCAFADESTIVTGGLDGQVRRYDLNTGNEDQIGTHDEGIRCIEYS  103 (323)
T ss_pred             CCcEEEEeccCcEEEEeccchhhhhhee-cCCceeeeeccCCceEEEeccCceEEEEEecCCcceeeccCCCceEEEEee
Confidence            5566677788888888887765555554 899999999999889999999999999998888888888899999999999


Q ss_pred             CC-CeEEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEEcCCEEEEEeCCCeEEEEECCCC-ceE----eeCCccEEE
Q psy7057         129 ND-TDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQ-NSF----MIPAMSVWA  202 (557)
Q Consensus       129 ~~-~~lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~~-~~~----~~~~~~v~~  202 (557)
                      +. +.+++||+|++|++||.+...+..++. ....|.++...++.|++|+.+..+.+||++.+ ..+    ......++|
T Consensus       104 ~~~~~vIsgsWD~~ik~wD~R~~~~~~~~d-~~kkVy~~~v~g~~LvVg~~~r~v~iyDLRn~~~~~q~reS~lkyqtR~  182 (323)
T KOG1036|consen  104 YEVGCVISGSWDKTIKFWDPRNKVVVGTFD-QGKKVYCMDVSGNRLVVGTSDRKVLIYDLRNLDEPFQRRESSLKYQTRC  182 (323)
T ss_pred             ccCCeEEEcccCccEEEEeccccccccccc-cCceEEEEeccCCEEEEeecCceEEEEEcccccchhhhccccceeEEEE
Confidence            76 779999999999999999866666665 34599999999999999999999999999887 222    233457899


Q ss_pred             EEEcCCCc-EEEEEcCCcEEEEecCCCCcc--hhHH---------HhcccceeEEEeccCCCceeEEEEeCCCcEEEEec
Q psy7057         203 VAILPNSD-IVTGSSDGIVRVFSANPDRQA--EDAV---------QAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSA  270 (557)
Q Consensus       203 v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~--~~~~---------~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~  270 (557)
                      |++.|++. +++++-||.|.+=.++.....  ....         -.....+|..+.+.+.. ..++||++||.|-+|+.
T Consensus       183 v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~Fhp~~-~tfaTgGsDG~V~~Wd~  261 (323)
T KOG1036|consen  183 VALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAFHPIH-GTFATGGSDGIVNIWDL  261 (323)
T ss_pred             EEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEeeecccCCceEEEEeceeEecccc-ceEEecCCCceEEEccC
Confidence            99999877 999999999988655544111  1111         11234667888888774 46899999999999999


Q ss_pred             CCChhh
Q psy7057         271 NPDRQA  276 (557)
Q Consensus       271 ~~~~~~  276 (557)
                      .+.+.+
T Consensus       262 ~~rKrl  267 (323)
T KOG1036|consen  262 FNRKRL  267 (323)
T ss_pred             cchhhh
Confidence            876554

>KOG0647|consensus

Probab=99.91  E-value=7.8e-23  Score=192.41  Aligned_cols=221  Identities=19%  Similarity=0.276  Sum_probs=175.6

Q ss_pred             CCEEEEEECCCeEEEEECCC-CeEE-EEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcEEEEEeCCCCCEEEE
Q psy7057          49 VNTLLSASWDMTAKLWCLES-QQCK-LTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGL  125 (557)
Q Consensus        49 ~~~l~sgs~Dg~i~iwd~~~-~~~~-~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~~~l~~h~~~V~~l  125 (557)
                      ..+++++|||++||+|+++. +..+ .....|.++|.+++|+.+| .+++|+.|+.+++||+....+..+..|..+|.++
T Consensus        40 ~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~Q~~~v~~Hd~pvkt~  119 (347)
T KOG0647|consen   40 DNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASGQVSQVAAHDAPVKTC  119 (347)
T ss_pred             CceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccCCCeeeeeecccceeEE
Confidence            45566777777777777765 2322 3345689999999999999 9999999999999997777888888999999999


Q ss_pred             EEeCCC---eEEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEEcCCEEEEEeCCCeEEEEECCCC-ceEeeC----C
Q psy7057         126 AVLNDT---DFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQ-NSFMIP----A  197 (557)
Q Consensus       126 ~~~~~~---~lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~~-~~~~~~----~  197 (557)
                      .|.+..   .|++||+|++|+.||++...++.++. -+..++++...-..++.+..++.|.+|+++.. ..+..+    .
T Consensus       120 ~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~-LPeRvYa~Dv~~pm~vVata~r~i~vynL~n~~te~k~~~SpLk  198 (347)
T KOG0647|consen  120 HWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQ-LPERVYAADVLYPMAVVATAERHIAVYNLENPPTEFKRIESPLK  198 (347)
T ss_pred             EEecCCCcceeEecccccceeecccCCCCeeeeee-ccceeeehhccCceeEEEecCCcEEEEEcCCCcchhhhhcCccc
Confidence            998763   37899999999999999999999887 67889999887778999999999999998665 333222    3


Q ss_pred             ccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHH---------hcccceeEEEeccCCCceeEEEEeCCCcEEE
Q psy7057         198 MSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQ---------AQYAEEVKKLKSANEQEIGGVKVSDDGIVRV  267 (557)
Q Consensus       198 ~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~---------~~~~~~v~~l~~~~~~~~~~vs~s~DG~Irv  267 (557)
                      -.++||+..++.+ ++.|+-+|.+-|..++...+......         ....+.|.++.+.+... .++++++||++.+
T Consensus       199 ~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYaVNsi~FhP~hg-tlvTaGsDGtf~F  277 (347)
T KOG0647|consen  199 WQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYAVNSIAFHPVHG-TLVTAGSDGTFSF  277 (347)
T ss_pred             ceeeEEEEEecCCceEeeeecceEEEEecCCCCccCceeEEEeccCCCCCCceEEecceEeecccc-eEEEecCCceEEE
Confidence            3689999999988 99999999999999987533211111         11245677788877444 6899999999999


Q ss_pred             EecC
Q psy7057         268 FSAN  271 (557)
Q Consensus       268 W~~~  271 (557)
                      ||-+
T Consensus       278 WDkd  281 (347)
T KOG0647|consen  278 WDKD  281 (347)
T ss_pred             ecch
Confidence            9854

>KOG0316|consensus

Probab=99.91  E-value=9.7e-23  Score=185.52  Aligned_cols=236  Identities=18%  Similarity=0.257  Sum_probs=186.4

Q ss_pred             EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcC
Q psy7057          26 ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLA   89 (557)
Q Consensus        26 l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~   89 (557)
                      .++++.|.+||+|++..                .+...+...+++|+.|+.+.+||+++|+.++.+++|...|+.+.|+.
T Consensus        32 ~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~TGkv~Rr~rgH~aqVNtV~fNe  111 (307)
T KOG0316|consen   32 CLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVNTGKVDRRFRGHLAQVNTVRFNE  111 (307)
T ss_pred             EEEcCCCceEEeecccccceeeeecCCCceeeeccccccccccccCCCCceEEEEEcccCeeeeecccccceeeEEEecC
Confidence            36889999999999876                44555678899999999999999999999999999999999999999


Q ss_pred             CC-EEEEEECCCeEEEEe---CCCcEEEEEeCCCCCEEEEEEeCCCeEEEEECCCeEEEEECCCCeEEEEEeCCCCcEEE
Q psy7057          90 NG-IIVTGCADKTIKLHS---EEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYS  165 (557)
Q Consensus        90 ~~-~l~sgs~dg~I~vwd---~~~~~~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~  165 (557)
                      +. .+++|+-|.++++||   .+-++++.+....+.|.++.+. +..+++||.||++|.||++.|.....+.+|  +|+|
T Consensus       112 esSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~-~heIvaGS~DGtvRtydiR~G~l~sDy~g~--pit~  188 (307)
T KOG0316|consen  112 ESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVA-EHEIVAGSVDGTVRTYDIRKGTLSSDYFGH--PITS  188 (307)
T ss_pred             cceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEec-ccEEEeeccCCcEEEEEeecceeehhhcCC--ccee
Confidence            87 999999999999999   4567889998889999999885 356999999999999999999887766654  6778


Q ss_pred             EEE--cCCEEEEEeCCCeEEEEECCCC---ceEeeCCccEE--EEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHh
Q psy7057         166 VAA--HGDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSVW--AVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQA  237 (557)
Q Consensus       166 l~~--~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~--~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~  237 (557)
                      +++  +++..++++.|+++++.|-.+.   +...+|...-+  .++++.... +++|++||.|++||+....++....  
T Consensus       189 vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYkGhkn~eykldc~l~qsdthV~sgSEDG~Vy~wdLvd~~~~sk~~--  266 (307)
T KOG0316|consen  189 VSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYKGHKNMEYKLDCCLNQSDTHVFSGSEDGKVYFWDLVDETQISKLS--  266 (307)
T ss_pred             EEecCCCCEEEEeeccceeeecccchhHHHHHhcccccceeeeeeeecccceeEEeccCCceEEEEEeccceeeeeec--
Confidence            888  8899999999999999996655   56666665433  334443333 8899999999999998776653322  


Q ss_pred             cccce-eEEEeccCCCceeEEEEeCCCcEEEE
Q psy7057         238 QYAEE-VKKLKSANEQEIGGVKVSDDGIVRVF  268 (557)
Q Consensus       238 ~~~~~-v~~l~~~~~~~~~~vs~s~DG~IrvW  268 (557)
                      .+... +..+.+.+.....+ ++ .++.+..|
T Consensus       267 ~~~~v~v~dl~~hp~~~~f~-~A-~~~~~~~~  296 (307)
T KOG0316|consen  267 VVSTVIVTDLSCHPTMDDFI-TA-TGHGDLFW  296 (307)
T ss_pred             cCCceeEEeeecccCcccee-Ee-cCCceece
Confidence            22223 56666666655433 22 23444445

>KOG0310|consensus

Probab=99.91  E-value=8.5e-23  Score=203.21  Aligned_cols=250  Identities=22%  Similarity=0.291  Sum_probs=199.7

Q ss_pred             cccEEEEEEcCCCc--EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEE
Q psy7057          12 SMDVRSLSVTPDGC--ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKL   73 (557)
Q Consensus        12 ~~~V~~l~~spdg~--l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~   73 (557)
                      .+.|.+++|+|..-  +++.| .-.|.||+..+                ..+..+|.++++|...|.|+|||+.+...++
T Consensus        26 ~~~vssl~fsp~~P~d~aVt~-S~rvqly~~~~~~~~k~~srFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~r~iLR  104 (487)
T KOG0310|consen   26 HNSVSSLCFSPKHPYDFAVTS-SVRVQLYSSVTRSVRKTFSRFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKSRVILR  104 (487)
T ss_pred             cCcceeEecCCCCCCceEEec-ccEEEEEecchhhhhhhHHhhccceeEEEeecCCeEEEccCCcCcEEEeccccHHHHH
Confidence            37899999999653  55443 34678887765                4566679999999999999999977766778


Q ss_pred             EEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEeCCCcE-EEEEeCCCCCEEEEEEeCCCe--EEEEECCCeEEEEECC
Q psy7057          74 TIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHSEEGEF-LKTLTGHTDCVRGLAVLNDTD--FVSCSNDASIRVWDST  148 (557)
Q Consensus        74 ~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~~~~~-~~~l~~h~~~V~~l~~~~~~~--lvs~s~Dg~I~vwd~~  148 (557)
                      .+.+|..+|..+.|+|.+  .+++|+.|+.+++||.+... ...+.+|++.|+|.+++|.+.  ++|||.||+||+||++
T Consensus       105 ~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR  184 (487)
T KOG0310|consen  105 QLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTR  184 (487)
T ss_pred             HHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEec
Confidence            899999999999999966  89999999999999965554 447889999999999998744  7799999999999999


Q ss_pred             CC-eEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC-c---eEeeCCccEEEEEEcCCCc-EEEEEcCCcE
Q psy7057         149 TG-KCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ-N---SFMIPAMSVWAVAILPNSD-IVTGSSDGIV  220 (557)
Q Consensus       149 ~~-~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~-~---~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I  220 (557)
                      +. ..+.++. |..+|.++.+  .|..+++++ ...+++||+-+. +   ....|...|+|+++..++. |++|+-|+.|
T Consensus       185 ~~~~~v~eln-hg~pVe~vl~lpsgs~iasAg-Gn~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~~V  262 (487)
T KOG0310|consen  185 SLTSRVVELN-HGCPVESVLALPSGSLIASAG-GNSVKVWDLTTGGQLLTSMFNHNKTVTCLRLASDSTRLLSGSLDRHV  262 (487)
T ss_pred             cCCceeEEec-CCCceeeEEEcCCCCEEEEcC-CCeEEEEEecCCceehhhhhcccceEEEEEeecCCceEeecccccce
Confidence            87 5666664 9999999999  556677665 468999997644 2   2234888999999999887 9999999999


Q ss_pred             EEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEE
Q psy7057         221 RVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVF  268 (557)
Q Consensus       221 ~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW  268 (557)
                      ++|++.+-+.....   .+.+++.++...+++. .++.|-.||.+-+-
T Consensus       263 KVfd~t~~Kvv~s~---~~~~pvLsiavs~dd~-t~viGmsnGlv~~r  306 (487)
T KOG0310|consen  263 KVFDTTNYKVVHSW---KYPGPVLSIAVSPDDQ-TVVIGMSNGLVSIR  306 (487)
T ss_pred             EEEEccceEEEEee---ecccceeeEEecCCCc-eEEEecccceeeee
Confidence            99997765544322   3566777777777555 47888888887665

>KOG0308|consensus

Probab=99.91  E-value=2.4e-23  Score=212.93  Aligned_cols=287  Identities=21%  Similarity=0.321  Sum_probs=224.2

Q ss_pred             EEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC------------------CCC-CCCCCEEEEEECCCeEEEE
Q psy7057           5 STALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND------------------LSP-GAKVNTLLSASWDMTAKLW   64 (557)
Q Consensus         5 ~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~------------------~~~-~~~~~~l~sgs~Dg~i~iw   64 (557)
                      ...++.|.+.|+.++...+++ |+++|.|-+|++|+...                  +++ .++...+++|+-|+.|.+|
T Consensus        66 ~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK~W~~~~~~~~c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflW  145 (735)
T KOG0308|consen   66 IASMEHHSDWVNDIILCGNGKTLISASSDTTVKVWNAHKDNTFCMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLW  145 (735)
T ss_pred             hhhhhhhHhHHhhHHhhcCCCceEEecCCceEEEeecccCcchhHhhhhcccchheeeeecccCceeEEecCCCccEEEE
Confidence            456788999999999999997 99999999999999876                  444 5567889999999999999


Q ss_pred             ECCCCe--E--------EEEEc-ccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCC
Q psy7057          65 CLESQQ--C--------KLTIR-QHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDT  131 (557)
Q Consensus        65 d~~~~~--~--------~~~l~-~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~  131 (557)
                      |++++.  .        ...+. ++...|.+++.++.+ .|++|+..+.+++|| .+.+.+..++||++.|+++..+++|
T Consensus       146 Din~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgtek~lr~wDprt~~kimkLrGHTdNVr~ll~~dDG  225 (735)
T KOG0308|consen  146 DINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGTEKDLRLWDPRTCKKIMKLRGHTDNVRVLLVNDDG  225 (735)
T ss_pred             EccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEEecCcccceEEeccccccceeeeeccccceEEEEEcCCC
Confidence            999772  2        22333 789999999999998 899999999999999 6778889999999999999999997


Q ss_pred             e-EEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEEcCC--EEEEEeCCCeEEEEECCCC---ceEeeCCccEEEEEE
Q psy7057         132 D-FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGD--LITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVAI  205 (557)
Q Consensus       132 ~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~~~~--~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~  205 (557)
                      . ++++|.||+|++||+...+|+.++..|...|+++..+..  .+++|+.||.|..=|++..   ..+.....+|..+..
T Consensus       226 t~~ls~sSDgtIrlWdLgqQrCl~T~~vH~e~VWaL~~~~sf~~vYsG~rd~~i~~Tdl~n~~~~tlick~daPv~~l~~  305 (735)
T KOG0308|consen  226 TRLLSASSDGTIRLWDLGQQRCLATYIVHKEGVWALQSSPSFTHVYSGGRDGNIYRTDLRNPAKSTLICKEDAPVLKLHL  305 (735)
T ss_pred             CeEeecCCCceEEeeeccccceeeeEEeccCceEEEeeCCCcceEEecCCCCcEEecccCCchhheEeecCCCchhhhhh
Confidence            6 999999999999999999999999999999999999554  7999999999999998774   445556667877777


Q ss_pred             cCCCc-EEEEEcCCcEEEEecCCCCcchhH-----HHhcccceeEEE----------------eccCCCceeEEEEeCCC
Q psy7057         206 LPNSD-IVTGSSDGIVRVFSANPDRQAEDA-----VQAQYAEEVKKL----------------KSANEQEIGGVKVSDDG  263 (557)
Q Consensus       206 ~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~-----~~~~~~~~v~~l----------------~~~~~~~~~~vs~s~DG  263 (557)
                      +.... +-+++.|+.|+-|...........     .......++...                ...-.+...++|=..+|
T Consensus       306 ~~~~~~~WvtTtds~I~rW~~~~~~~l~~s~~~~~~~T~~~~~~~~~~~tp~~vi~Gg~ai~k~~mL~dkRhVlTkDa~g  385 (735)
T KOG0308|consen  306 HEHDNSVWVTTTDSSIKRWKLEPDIALSVSGDLDFFSTDSNNHSCDLTNTPDSVIPGGAAIKKHAMLNDKRHVLTKDAKG  385 (735)
T ss_pred             ccccCCceeeeccccceecCCccccccccCCCCCcccccCCCccccccCCCceeccCchhhhhhhhhcCcceEeeecCCC
Confidence            75544 788899999999987543211100     000000011110                00112333567888999


Q ss_pred             cEEEEecCCChhhHHHHHHHHHHHHHHH
Q psy7057         264 IVRVFSANPDRQAEDAVQAQYAEEVKKL  291 (557)
Q Consensus       264 ~IrvW~~~~~~~~~~~~~~~~~~~~~~~  291 (557)
                      .+.+||+-..+.+.+.-...+++.+++.
T Consensus       386 nv~lwDIl~~~~~~d~gk~~FE~iv~k~  413 (735)
T KOG0308|consen  386 NVALWDILACVKVEDFGKVDFEEIVKKL  413 (735)
T ss_pred             CEEEEEeeeeeehhhcccccHHHHHHhh
Confidence            9999999998888766555555555554

>KOG0641|consensus

Probab=99.91  E-value=1.4e-21  Score=176.71  Aligned_cols=268  Identities=22%  Similarity=0.328  Sum_probs=212.1

Q ss_pred             cEEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC-------------------------------CCCCCCC
Q psy7057           2 YKLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND-------------------------------LSPGAKV   49 (557)
Q Consensus         2 ~kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~-------------------------------~~~~~~~   49 (557)
                      |+.+..|. .+..|++++|.|.|. .+.||...+.||--...                               .+|++.+
T Consensus        23 f~~i~~l~-dsqairav~fhp~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~~g  101 (350)
T KOG0641|consen   23 FEAINILE-DSQAIRAVAFHPAGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSPCG  101 (350)
T ss_pred             eEEEEEec-chhheeeEEecCCCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecCcc
Confidence            45555554 567899999999998 67889999999864332                               6788999


Q ss_pred             CEEEEEECCCeEEEEECCCCeE-----EEEEcccCCcEEEEEEcCC----C-EEEEEE-CCCeEEEEe-CCCcEEEEEeC
Q psy7057          50 NTLLSASWDMTAKLWCLESQQC-----KLTIRQHEMAVWGVIQLAN----G-IIVTGC-ADKTIKLHS-EEGEFLKTLTG  117 (557)
Q Consensus        50 ~~l~sgs~Dg~i~iwd~~~~~~-----~~~l~~h~~~V~~l~~~~~----~-~l~sgs-~dg~I~vwd-~~~~~~~~l~~  117 (557)
                      .+|++|+.|++|++...+...+     ...+.-|.+.|..++|..+    + +|++++ .|..|.+-| .+|...+.+.+
T Consensus       102 eliatgsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~~~~a~sg  181 (350)
T KOG0641|consen  102 ELIATGSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQGFHALSG  181 (350)
T ss_pred             CeEEecCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCCCCcceeecC
Confidence            9999999999999977654332     3456779999999999763    2 566654 467788877 78889999999


Q ss_pred             CCCCEEEEEEeCCCeEEEEECCCeEEEEECCCCeEEEEEeC--C-----CCcEEEEEE--cCCEEEEEeCCCeEEEEECC
Q psy7057         118 HTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYG--H-----PNFIYSVAA--HGDLITSGGEDQCVCVYQNK  188 (557)
Q Consensus       118 h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~~~~~~~~--h-----~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~  188 (557)
                      |++.|.++---..-.|++||.|.+||+||++-..++.++..  |     ++.|.+++.  .|++|++|-.|....+||++
T Consensus       182 htghilalyswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dssc~lydir  261 (350)
T KOG0641|consen  182 HTGHILALYSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYDIR  261 (350)
T ss_pred             CcccEEEEEEecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcceeeeccCCCceEEEEee
Confidence            99999988654455688999999999999999999888742  2     356788887  67899999999999999987


Q ss_pred             CC---ceEeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCC--cchhHHHhcccceeEEEeccCCCceeEEEEeCC
Q psy7057         189 AQ---NSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDR--QAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDD  262 (557)
Q Consensus       189 ~~---~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~--~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~D  262 (557)
                      ..   +.+..|...|+|+.|+|... +++|+.|..|++-|+...-  ++.......|...+..+.+.+. ...+++.|.|
T Consensus       262 g~r~iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdlqgdla~el~~~vv~ehkdk~i~~rwh~~-d~sfisssad  340 (350)
T KOG0641|consen  262 GGRMIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDLAHELPIMVVAEHKDKAIQCRWHPQ-DFSFISSSAD  340 (350)
T ss_pred             CCceeeeeCCCccceeEEEeCCCceEEEEecccceEEEeecccchhhcCceEEEEeccCceEEEEecCc-cceeeeccCc
Confidence            66   77788999999999999988 8999999999999987542  2222333455566666666554 4457899999


Q ss_pred             CcEEEEecC
Q psy7057         263 GIVRVFSAN  271 (557)
Q Consensus       263 G~IrvW~~~  271 (557)
                      .++.+|.+.
T Consensus       341 kt~tlwa~~  349 (350)
T KOG0641|consen  341 KTATLWALN  349 (350)
T ss_pred             ceEEEeccC
Confidence            999999875

>KOG2096|consensus

Probab=99.90  E-value=1.2e-21  Score=185.29  Aligned_cols=268  Identities=17%  Similarity=0.294  Sum_probs=201.2

Q ss_pred             EEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC--------------------CCCCCCCC-EEEEEECCCeEE
Q psy7057           5 STALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND--------------------LSPGAKVN-TLLSASWDMTAK   62 (557)
Q Consensus         5 ~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~--------------------~~~~~~~~-~l~sgs~Dg~i~   62 (557)
                      ..+|+||.+.|++++|+.||+ |+|++.|++|++|++.+                    +.+.|+-. .++++-...+++
T Consensus        79 ~~~LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~~g~~l~  158 (420)
T KOG2096|consen   79 VSVLKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVKRGNKLC  158 (420)
T ss_pred             hhhhhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEEEccCCEEE
Confidence            357899999999999999999 99999999999999987                    33344433 344555566788


Q ss_pred             EEECCCCe---EEE---------EEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcEEEEEeCCCCCEEEEEEeC
Q psy7057          63 LWCLESQQ---CKL---------TIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLN  129 (557)
Q Consensus        63 iwd~~~~~---~~~---------~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~  129 (557)
                      +|.+...+   ...         .-+.|.-.|..+-....+ +|.+++.|..|.+|+..|+.+..+......-+..+++|
T Consensus       159 vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lkGq~L~~idtnq~~n~~aavSP  238 (420)
T KOG2096|consen  159 VYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLKGQLLQSIDTNQSSNYDAAVSP  238 (420)
T ss_pred             EEEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecCCceeeeeccccccccceeeCC
Confidence            88764321   111         112245556565555555 89999999999999999999999887777788889999


Q ss_pred             CCeEE-EEECCCeEEEEECC---CC-----eEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC-------c
Q psy7057         130 DTDFV-SCSNDASIRVWDST---TG-----KCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ-------N  191 (557)
Q Consensus       130 ~~~lv-s~s~Dg~I~vwd~~---~~-----~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~-------~  191 (557)
                      +|+|+ +++..--|++|.+-   .|     +.+..+++|.+.|.+++|  +...+++.|.||++++||+.-.       .
T Consensus       239 ~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtdVrY~~~qDpk  318 (420)
T KOG2096|consen  239 DGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTDVRYEAGQDPK  318 (420)
T ss_pred             CCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeeccceEecCCCch
Confidence            99965 77778889999863   22     345678899999999999  5568999999999999994321       1


Q ss_pred             eEee-------CCccEEEEEEcCCCcEEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCc
Q psy7057         192 SFMI-------PAMSVWAVAILPNSDIVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGI  264 (557)
Q Consensus       192 ~~~~-------~~~~v~~v~~~p~g~l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~  264 (557)
                      .++.       .......+..+|+|++++.+....++++..+.++... .....|...+.++.+.+...  .++.+.|..
T Consensus       319 ~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s~gs~l~~~~se~g~~~~-~~e~~h~~~Is~is~~~~g~--~~atcGdr~  395 (420)
T KOG2096|consen  319 ILKEGSAPLHAAGSEPVRLELSPSGDSLAVSFGSDLKVFASEDGKDYP-ELEDIHSTTISSISYSSDGK--YIATCGDRY  395 (420)
T ss_pred             HhhcCCcchhhcCCCceEEEeCCCCcEEEeecCCceEEEEcccCccch-hHHHhhcCceeeEEecCCCc--EEeeeccee
Confidence            1111       1223448999999998888888889999988866543 34456778899998877665  366678999


Q ss_pred             EEEEecCCChh
Q psy7057         265 VRVFSANPDRQ  275 (557)
Q Consensus       265 IrvW~~~~~~~  275 (557)
                      +|++.-.++-.
T Consensus       396 vrv~~ntpg~~  406 (420)
T KOG2096|consen  396 VRVIRNTPGWH  406 (420)
T ss_pred             eeeecCCCchh
Confidence            99998666643

>KOG1446|consensus

Probab=99.90  E-value=1.7e-21  Score=184.93  Aligned_cols=249  Identities=18%  Similarity=0.261  Sum_probs=196.0

Q ss_pred             cEEEEEeccCcccEEEEEEcCCCcEEEEECCCcEEEEcCCCCCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCc
Q psy7057           2 YKLSTALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMA   81 (557)
Q Consensus         2 ~kl~~~l~gH~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~   81 (557)
                      |+..+.|..-.+.|++|.|+++|                         ..+++++.|.+++|||..+++++.++..++-.
T Consensus         4 ~~~ak~f~~~~~~i~sl~fs~~G-------------------------~~litss~dDsl~LYd~~~g~~~~ti~skkyG   58 (311)
T KOG1446|consen    4 FRPAKVFRETNGKINSLDFSDDG-------------------------LLLITSSEDDSLRLYDSLSGKQVKTINSKKYG   58 (311)
T ss_pred             cccccccccCCCceeEEEecCCC-------------------------CEEEEecCCCeEEEEEcCCCceeeEeeccccc
Confidence            56677777778899999999874                         56667777788888888999999999888888


Q ss_pred             EEEEEEcCCC-EEEEEEC--CCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEEEEECCCCeEEEEE
Q psy7057          82 VWGVIQLANG-IIVTGCA--DKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHTM  156 (557)
Q Consensus        82 V~~l~~~~~~-~l~sgs~--dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~~~~~  156 (557)
                      +..++|.... .++.++.  |.+||..+ .+.+.++.+.||...|.+|+.+|-+. |+++|.|++||+||++..+|...+
T Consensus        59 ~~~~~Fth~~~~~i~sStk~d~tIryLsl~dNkylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l  138 (311)
T KOG1446|consen   59 VDLACFTHHSNTVIHSSTKEDDTIRYLSLHDNKYLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLL  138 (311)
T ss_pred             ccEEEEecCCceEEEccCCCCCceEEEEeecCceEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEE
Confidence            8888887655 5665665  88999999 57788999999999999999999754 999999999999999999988887


Q ss_pred             eCCCCcEEEEEEcCCEEEEEeCCCeEEEEECCCC-----ceEeeC---CccEEEEEEcCCCc-EEEEEcCCcEEEEecCC
Q psy7057         157 YGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQ-----NSFMIP---AMSVWAVAILPNSD-IVTGSSDGIVRVFSANP  227 (557)
Q Consensus       157 ~~h~~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~~-----~~~~~~---~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~  227 (557)
                      .....++.+....|-++|++.....|++||++..     ..+...   ......+.|+|+|+ |+.+...+.+++.|.-.
T Consensus       139 ~~~~~pi~AfDp~GLifA~~~~~~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~  218 (311)
T KOG1446|consen  139 NLSGRPIAAFDPEGLIFALANGSELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFD  218 (311)
T ss_pred             ecCCCcceeECCCCcEEEEecCCCeEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccC
Confidence            7666676666667778888888889999997654     344333   45788999999999 88899999999999877


Q ss_pred             CCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCChh
Q psy7057         228 DRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQ  275 (557)
Q Consensus       228 ~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~~~  275 (557)
                      +..............+..-+...++...+++|+.||+|.+|+++.+..
T Consensus       219 G~~~~tfs~~~~~~~~~~~a~ftPds~Fvl~gs~dg~i~vw~~~tg~~  266 (311)
T KOG1446|consen  219 GTVKSTFSGYPNAGNLPLSATFTPDSKFVLSGSDDGTIHVWNLETGKK  266 (311)
T ss_pred             CcEeeeEeeccCCCCcceeEEECCCCcEEEEecCCCcEEEEEcCCCcE
Confidence            765443333333333333334444455689999999999999877643

>KOG0973|consensus

Probab=99.90  E-value=7.5e-22  Score=213.28  Aligned_cols=271  Identities=18%  Similarity=0.261  Sum_probs=223.4

Q ss_pred             EEEEEeccC-cccEEEEEEcCCCc-EEEEE--CCCcEEEEcCCC----------------------------CCCCCCCC
Q psy7057           3 KLSTALYGH-SMDVRSLSVTPDGC-ILSAS--RDKSAKLWKPND----------------------------LSPGAKVN   50 (557)
Q Consensus         3 kl~~~l~gH-~~~V~~l~~spdg~-l~sgs--~Dg~V~iWd~~~----------------------------~~~~~~~~   50 (557)
                      -+...+-+| ...|.++..+|||. ++||+  .|+.++||+...                            +.|+++|.
T Consensus         3 l~kp~wv~H~~~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~   82 (942)
T KOG0973|consen    3 LLKPTWVNHNEKSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGS   82 (942)
T ss_pred             eecccccccCCeeEEEEEecCCceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCC
Confidence            344455566 45789999999998 99999  999999998765                            56889999


Q ss_pred             EEEEEECCCeEEEEECCC------------------CeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCc
Q psy7057          51 TLLSASWDMTAKLWCLES------------------QQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGE  110 (557)
Q Consensus        51 ~l~sgs~Dg~i~iwd~~~------------------~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~  110 (557)
                      +|++||.|+.|.||....                  .++...+.+|...|..++|+|++ ++++++.|++|.+|+ .+.+
T Consensus        83 ~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~  162 (942)
T KOG0973|consen   83 YLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTFE  162 (942)
T ss_pred             eEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEEEccccce
Confidence            999999999999998762                  24778899999999999999988 999999999999999 6778


Q ss_pred             EEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEEEEECCCCeEEEEEeCC------CCcEEEEEE--cCCEEEEEe----
Q psy7057         111 FLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHTMYGH------PNFIYSVAA--HGDLITSGG----  177 (557)
Q Consensus       111 ~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h------~~~V~~l~~--~~~~l~s~s----  177 (557)
                      .+..+.+|.+.|..+.|.|-|+ |++-+.|++|++|++.+..+.+.+..+      ...++.++|  +|.+|++.-    
T Consensus       163 ~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~  242 (942)
T KOG0973|consen  163 LLKVLRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNG  242 (942)
T ss_pred             eeeeeecccccccceEECCccCeeeeecCCceEEEEEcccceeeEeeccchhhCCCcceeeecccCCCcCeecchhhccC
Confidence            8999999999999999999998 669999999999998887777777654      346778888  888888764    


Q ss_pred             CCCeEEEEECCCC---ceEeeCCccEEEEEEcCC------C------------cEEEEEcCCcEEEEecCCCCcchhHHH
Q psy7057         178 EDQCVCVYQNKAQ---NSFMIPAMSVWAVAILPN------S------------DIVTGSSDGIVRVFSANPDRQAEDAVQ  236 (557)
Q Consensus       178 ~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p~------g------------~l~sg~~Dg~I~iwd~~~~~~~~~~~~  236 (557)
                      .-.++.|.+-++.   ..+.+|..++.++.|+|.      .            -+++|+.|++|-||.....++. ...+
T Consensus       243 ~~~~~~IieR~tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~RPl-~vi~  321 (942)
T KOG0973|consen  243 GKSTIAIIERGTWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALPRPL-FVIH  321 (942)
T ss_pred             CcceeEEEecCCceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCCCch-hhhh
Confidence            2346788875433   788899999999999972      1            1568999999999998666654 2334


Q ss_pred             hcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCChh
Q psy7057         237 AQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQ  275 (557)
Q Consensus       237 ~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~~~  275 (557)
                      .-+..++..+.|.++.. .++++|.||+|.++.++++..
T Consensus       322 ~lf~~SI~DmsWspdG~-~LfacS~DGtV~~i~Fee~El  359 (942)
T KOG0973|consen  322 NLFNKSIVDMSWSPDGF-SLFACSLDGTVALIHFEEKEL  359 (942)
T ss_pred             hhhcCceeeeeEcCCCC-eEEEEecCCeEEEEEcchHHh
Confidence            45667788888877654 589999999999999988643

>KOG0643|consensus

Probab=99.90  E-value=2.5e-21  Score=179.41  Aligned_cols=287  Identities=19%  Similarity=0.237  Sum_probs=206.0

Q ss_pred             EeccCcccEEEEEEcCCCcEEEEECCCcEEEEcCCCCCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEE
Q psy7057           7 ALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVI   86 (557)
Q Consensus         7 ~l~gH~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~   86 (557)
                      .|+||+.+++-|.++.+|                         ++|.+|+.|.+..+|-..+|+.+-++.+|.+.|+|+.
T Consensus         5 ~l~GHERplTqiKyN~eG-------------------------DLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~D   59 (327)
T KOG0643|consen    5 LLQGHERPLTQIKYNREG-------------------------DLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCD   59 (327)
T ss_pred             ccccCccccceEEecCCC-------------------------cEEEEecCCCCceEEEecCCceeeeecCCCceEEEEE
Confidence            478999999999999885                         5566666666677776678899999999999999999


Q ss_pred             EcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCeEEEEECC------CeEEEEECC-------CCe
Q psy7057          87 QLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSND------ASIRVWDST-------TGK  151 (557)
Q Consensus        87 ~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~lvs~s~D------g~I~vwd~~-------~~~  151 (557)
                      ..-+. .+++|+.|.++++|| .+|+++..++ ...+|+.+.|+.++.++..+.|      +.|.++|++       ..+
T Consensus        60 id~~s~~liTGSAD~t~kLWDv~tGk~la~~k-~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~e  138 (327)
T KOG0643|consen   60 IDWDSKHLITGSADQTAKLWDVETGKQLATWK-TNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEE  138 (327)
T ss_pred             ecCCcceeeeccccceeEEEEcCCCcEEEEee-cCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccC
Confidence            98877 999999999999999 7888888887 5678999999999886654444      679999998       456


Q ss_pred             EEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC----ceEeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEe
Q psy7057         152 CVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ----NSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFS  224 (557)
Q Consensus       152 ~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~----~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd  224 (557)
                      +...+..+...+..+.|  .+++|++|.+||.|.+||.++.    .....|...|+.+.++++.. ++++|.|.+-++||
T Consensus       139 p~~kI~t~~skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D  218 (327)
T KOG0643|consen  139 PYLKIPTPDSKITSALWGPLGETIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVD  218 (327)
T ss_pred             ceEEecCCccceeeeeecccCCEEEEecCCCcEEEEEcccCceeeechhhhccccccccccCCcceEEecccCccceeee
Confidence            78888888899999988  6789999999999999998876    34456888999999999998 99999999999999


Q ss_pred             cCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCc-EEEEecCCChhhHHHHHHHHHHHHHHHhhhhhcccCCee
Q psy7057         225 ANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGI-VRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVK  303 (557)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~-IrvW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (557)
                      ..+-..+.....   ..++......|.....++-|+.+-+ |.-=+...++.-..-....+++++...    +..-+.++
T Consensus       219 ~~tl~v~Kty~t---e~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrv----kGHFGPIN  291 (327)
T KOG0643|consen  219 VRTLEVLKTYTT---ERPVNTAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRV----KGHFGPIN  291 (327)
T ss_pred             ccceeeEEEeee---cccccceecccccceEEecCCceeeeeeeecccccchhhhHHHHHHHHHhccc----cccccCcc
Confidence            987665433322   2344555555544433333333321 111111122211111111222222222    12234444


Q ss_pred             ccCCCCcccccCCCccCccEEEE
Q psy7057         304 VSDLPGKEVLYEPGKADGDVKMV  326 (557)
Q Consensus       304 ~~~l~~~~~~~~~G~~~~~~~~~  326 (557)
                      .-++.+.-.....|.|+|.+++.
T Consensus       292 svAfhPdGksYsSGGEDG~VR~h  314 (327)
T KOG0643|consen  292 SVAFHPDGKSYSSGGEDGYVRLH  314 (327)
T ss_pred             eeEECCCCcccccCCCCceEEEE
Confidence            44555555566778888888763

>KOG0640|consensus

Probab=99.90  E-value=1.8e-22  Score=190.19  Aligned_cols=223  Identities=21%  Similarity=0.294  Sum_probs=188.2

Q ss_pred             EEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC------------------CCCCCCCCEEEEEECCCeEEEE
Q psy7057           4 LSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND------------------LSPGAKVNTLLSASWDMTAKLW   64 (557)
Q Consensus         4 l~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~------------------~~~~~~~~~l~sgs~Dg~i~iw   64 (557)
                      ++++|..|.++|+++.|+|... |++|+.|++|+++|...                  ++++|.|.+|+.|....++++|
T Consensus       164 vIRTlYDH~devn~l~FHPre~ILiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlY  243 (430)
T KOG0640|consen  164 VIRTLYDHVDEVNDLDFHPRETILISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLY  243 (430)
T ss_pred             eEeehhhccCcccceeecchhheEEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEE
Confidence            6789999999999999999888 88999999999999987                  8899999999999999999999


Q ss_pred             ECCCCeEEEEE---cccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEe-CCC-CCEEEEEEeCCCe-EEEE
Q psy7057          65 CLESQQCKLTI---RQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLT-GHT-DCVRGLAVLNDTD-FVSC  136 (557)
Q Consensus        65 d~~~~~~~~~l---~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~-~h~-~~V~~l~~~~~~~-lvs~  136 (557)
                      |+++.++...-   ..|+..|+++.+++.+ +.++||.||.|++|| .+++|+.++. .|. ..|++..|..+++ +++.
T Consensus       244 dv~T~QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsS  323 (430)
T KOG0640|consen  244 DVNTYQCFVSANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSS  323 (430)
T ss_pred             eccceeEeeecCcccccccceeEEEecCCccEEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCeEEeec
Confidence            99998877654   4589999999999988 999999999999999 8889988875 465 4699999999988 5599


Q ss_pred             ECCCeEEEEECCCCeEEEEEeCCCC--c---EEEEEE--cCCEEEEEe-CCCeEEEEECCCC----ceEeeCCccEEEEE
Q psy7057         137 SNDASIRVWDSTTGKCVHTMYGHPN--F---IYSVAA--HGDLITSGG-EDQCVCVYQNKAQ----NSFMIPAMSVWAVA  204 (557)
Q Consensus       137 s~Dg~I~vwd~~~~~~~~~~~~h~~--~---V~~l~~--~~~~l~s~s-~Dg~I~iwd~~~~----~~~~~~~~~v~~v~  204 (557)
                      +.|.++++|.+.+++++.++.|-..  .   -+...|  ..++++.-. ..+.++-||.++.    ..-.+|.+.++.+.
T Consensus       324 G~DS~vkLWEi~t~R~l~~YtGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtadr~~l~slgHn~a~R~i~  403 (430)
T KOG0640|consen  324 GKDSTVKLWEISTGRMLKEYTGAGTTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTADRVALLSLGHNGAVRWIV  403 (430)
T ss_pred             CCcceeeeeeecCCceEEEEecCCcccchhhhhhhhhcCccceEEccccccCceeeccccchhhhhhcccCCCCCceEEE
Confidence            9999999999999999999876421  1   112223  334554433 4568999997766    23357899999999


Q ss_pred             EcCCCc-EEEEEcCCcEEEEecC
Q psy7057         205 ILPNSD-IVTGSSDGIVRVFSAN  226 (557)
Q Consensus       205 ~~p~g~-l~sg~~Dg~I~iwd~~  226 (557)
                      -+|.+. |++|+.|..+|+|-.+
T Consensus       404 HSP~~p~FmTcsdD~raRFWyrr  426 (430)
T KOG0640|consen  404 HSPVEPAFMTCSDDFRARFWYRR  426 (430)
T ss_pred             eCCCCCceeeecccceeeeeeec
Confidence            999998 9999999999999654

>KOG0310|consensus

Probab=99.90  E-value=6.5e-22  Score=196.97  Aligned_cols=216  Identities=21%  Similarity=0.299  Sum_probs=177.3

Q ss_pred             eccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCC-CCCEEEEEECCCeEEEEECCCC
Q psy7057           8 LYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGA-KVNTLLSASWDMTAKLWCLESQ   69 (557)
Q Consensus         8 l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~-~~~~l~sgs~Dg~i~iwd~~~~   69 (557)
                      +....+.|.+++|..||+ |++|...|.|+|+|..+                ..+++ ++..+++|+.|+.+++||+.+.
T Consensus        64 ~srFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a  143 (487)
T KOG0310|consen   64 FSRFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKSRVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTA  143 (487)
T ss_pred             HHhhccceeEEEeecCCeEEEccCCcCcEEEeccccHHHHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCc
Confidence            444568899999999999 66888899999999766                33333 4567788999999999999998


Q ss_pred             eEEEEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEeCC--CcEEEEEeCCCCCEEEEEEeCCCeEEEEECCCeEEEE
Q psy7057          70 QCKLTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHSEE--GEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVW  145 (557)
Q Consensus        70 ~~~~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~~--~~~~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vw  145 (557)
                      .....+.+|++.|.|.+++|..  .++|||-||+|++||..  +..+..+. |..+|..+.+.|.|.++.......+++|
T Consensus       144 ~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~eln-hg~pVe~vl~lpsgs~iasAgGn~vkVW  222 (487)
T KOG0310|consen  144 YVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVELN-HGCPVESVLALPSGSLIASAGGNSVKVW  222 (487)
T ss_pred             EEEEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCCceeEEec-CCCceeeEEEcCCCCEEEEcCCCeEEEE
Confidence            8877899999999999999954  89999999999999932  24555554 9999999999999765544445789999


Q ss_pred             ECCCCe-EEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCCceEe--eCCccEEEEEEcCCCc-EEEEEcCCc
Q psy7057         146 DSTTGK-CVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQNSFM--IPAMSVWAVAILPNSD-IVTGSSDGI  219 (557)
Q Consensus       146 d~~~~~-~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~~~~~--~~~~~v~~v~~~p~g~-l~sg~~Dg~  219 (557)
                      |+.+|. .+..+..|...|+|+.+  ++..|++++-|+.+++||+...+.+.  ....+|.+++++|+++ ++.|..+|.
T Consensus       223 Dl~~G~qll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t~~Kvv~s~~~~~pvLsiavs~dd~t~viGmsnGl  302 (487)
T KOG0310|consen  223 DLTTGGQLLTSMFNHNKTVTCLRLASDSTRLLSGSLDRHVKVFDTTNYKVVHSWKYPGPVLSIAVSPDDQTVVIGMSNGL  302 (487)
T ss_pred             EecCCceehhhhhcccceEEEEEeecCCceEeecccccceEEEEccceEEEEeeecccceeeEEecCCCceEEEecccce
Confidence            998654 45555569999999999  66899999999999999977664443  3456999999999988 999999998


Q ss_pred             EEEEe
Q psy7057         220 VRVFS  224 (557)
Q Consensus       220 I~iwd  224 (557)
                      +.+=+
T Consensus       303 v~~rr  307 (487)
T KOG0310|consen  303 VSIRR  307 (487)
T ss_pred             eeeeh
Confidence            87653

>KOG0300|consensus

Probab=99.90  E-value=1.8e-22  Score=190.65  Aligned_cols=225  Identities=24%  Similarity=0.310  Sum_probs=188.9

Q ss_pred             EEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCC------C---------------------------------
Q psy7057           3 KLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPN------D---------------------------------   42 (557)
Q Consensus         3 kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~------~---------------------------------   42 (557)
                      ++..++.||.+.|+||+|++.+. ++++|.|++..||...      .                                 
T Consensus       181 ~CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~t  260 (481)
T KOG0300|consen  181 ACLATYTGHTGSVNSIKFHNSGLLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHT  260 (481)
T ss_pred             cceeeecccccceeeEEeccccceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCce
Confidence            45678899999999999999998 7799999999999721      1                                 


Q ss_pred             -----------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEE
Q psy7057          43 -----------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKL  104 (557)
Q Consensus        43 -----------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~v  104 (557)
                                       ..|-..++.++++|||.+..+||+++++++..|.+|....+.++-.|.. ++++.+.|.+.++
T Consensus       261 iRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRL  340 (481)
T KOG0300|consen  261 IRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTANLWDVETGEVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRL  340 (481)
T ss_pred             eeeeeeeeeccccceEehhhhcCcceeeeeeccccceeeeeccCceeccccCcchhccccccCCcceEEEEeccCceeEe
Confidence                             2223346789999999999999999999999999999999999999977 8999999999999


Q ss_pred             EeCC--CcEEEEEeCCCCCEEEEEEeCCCeEEEEECCCeEEEEECCCC-eEEEEEeCCCCcEEEEEE-c-CCEEEEEeCC
Q psy7057         105 HSEE--GEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTG-KCVHTMYGHPNFIYSVAA-H-GDLITSGGED  179 (557)
Q Consensus       105 wd~~--~~~~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~-~~~~~~~~h~~~V~~l~~-~-~~~l~s~s~D  179 (557)
                      ||..  -..+..|.+|.+.|+++.|.-+.++++||.|.+|++||+++. .++.++. ...++..++. . +..++.--.+
T Consensus       341 WDFReaI~sV~VFQGHtdtVTS~vF~~dd~vVSgSDDrTvKvWdLrNMRsplATIR-tdS~~NRvavs~g~~iIAiPhDN  419 (481)
T KOG0300|consen  341 WDFREAIQSVAVFQGHTDTVTSVVFNTDDRVVSGSDDRTVKVWDLRNMRSPLATIR-TDSPANRVAVSKGHPIIAIPHDN  419 (481)
T ss_pred             ccchhhcceeeeecccccceeEEEEecCCceeecCCCceEEEeeeccccCcceeee-cCCccceeEeecCCceEEeccCC
Confidence            9944  345778999999999999999999999999999999999875 4677766 4567777777 3 4467777788


Q ss_pred             CeEEEEECCCC-------ceEeeCCccEEEEEEcCCCc---EEEEEcCCcEEEEecCCC
Q psy7057         180 QCVCVYQNKAQ-------NSFMIPAMSVWAVAILPNSD---IVTGSSDGIVRVFSANPD  228 (557)
Q Consensus       180 g~I~iwd~~~~-------~~~~~~~~~v~~v~~~p~g~---l~sg~~Dg~I~iwd~~~~  228 (557)
                      ..|++||+...       ..-++|...|.|++|+.+..   |++++.|..+.=|+++..
T Consensus       420 RqvRlfDlnG~RlaRlPrtsRqgHrRMV~c~AW~eehp~cnLftcGFDR~v~gW~in~p  478 (481)
T KOG0300|consen  420 RQVRLFDLNGNRLARLPRTSRQGHRRMVTCCAWLEEHPACNLFTCGFDRMVAGWKINTP  478 (481)
T ss_pred             ceEEEEecCCCccccCCcccccccceeeeeeeccccCcccccccccccceeeeeEeccc
Confidence            89999997644       23456778899999986643   999999999999998754

>KOG0306|consensus

Probab=99.89  E-value=7.7e-22  Score=204.75  Aligned_cols=224  Identities=20%  Similarity=0.340  Sum_probs=190.6

Q ss_pred             EEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEE
Q psy7057           3 KLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWC   65 (557)
Q Consensus         3 kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd   65 (557)
                      +.++++.  .+.+.|.+|.|.++ +++|...|.+.++|+.+                ++..|++..+++||.|.+|++||
T Consensus       405 kciRTi~--~~y~l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS~~l~Eti~AHdgaIWsi~~~pD~~g~vT~saDktVkfWd  482 (888)
T KOG0306|consen  405 KCIRTIT--CGYILASKFVPGDRYIVLGTKNGELQVFDLASASLVETIRAHDGAIWSISLSPDNKGFVTGSADKTVKFWD  482 (888)
T ss_pred             ceeEEec--cccEEEEEecCCCceEEEeccCCceEEEEeehhhhhhhhhccccceeeeeecCCCCceEEecCCcEEEEEe
Confidence            3445553  34888999999887 88999999999999876                67788999999999999999999


Q ss_pred             CCC-----Ce--EEEEEc-----ccCCcEEEEEEcCCC-EEEEEECCCeEEEEeC-CCcEEEEEeCCCCCEEEEEEeCCC
Q psy7057          66 LES-----QQ--CKLTIR-----QHEMAVWGVIQLANG-IIVTGCADKTIKLHSE-EGEFLKTLTGHTDCVRGLAVLNDT  131 (557)
Q Consensus        66 ~~~-----~~--~~~~l~-----~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~-~~~~~~~l~~h~~~V~~l~~~~~~  131 (557)
                      ..-     +.  .+..+.     .-+..|.|+.++|++ +|+.+--|++++||-+ +-+...++.||.-+|.||.++|++
T Consensus       483 f~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Spdgk~LaVsLLdnTVkVyflDtlKFflsLYGHkLPV~smDIS~DS  562 (888)
T KOG0306|consen  483 FKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSPDGKLLAVSLLDNTVKVYFLDTLKFFLSLYGHKLPVLSMDISPDS  562 (888)
T ss_pred             EEEEeccCcccceeeeeccceEEeccccEEEEEEcCCCcEEEEEeccCeEEEEEecceeeeeeecccccceeEEeccCCc
Confidence            632     11  111111     135789999999999 8889999999999974 446677889999999999999997


Q ss_pred             e-EEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC---ceEeeCCccEEEEEE
Q psy7057         132 D-FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVAI  205 (557)
Q Consensus       132 ~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~  205 (557)
                      . ++|||.|++|++|-+.-|.|.+.+.+|.+.|.++.|  ....+++||.|+.|+-||....   +.+.+|...|||++.
T Consensus       563 klivTgSADKnVKiWGLdFGDCHKS~fAHdDSvm~V~F~P~~~~FFt~gKD~kvKqWDg~kFe~iq~L~~H~~ev~cLav  642 (888)
T KOG0306|consen  563 KLIVTGSADKNVKIWGLDFGDCHKSFFAHDDSVMSVQFLPKTHLFFTCGKDGKVKQWDGEKFEEIQKLDGHHSEVWCLAV  642 (888)
T ss_pred             CeEEeccCCCceEEeccccchhhhhhhcccCceeEEEEcccceeEEEecCcceEEeechhhhhhheeeccchheeeeeEE
Confidence            7 679999999999999999999999999999999999  4457999999999999996544   888999999999999


Q ss_pred             cCCCc-EEEEEcCCcEEEEecCCC
Q psy7057         206 LPNSD-IVTGSSDGIVRVFSANPD  228 (557)
Q Consensus       206 ~p~g~-l~sg~~Dg~I~iwd~~~~  228 (557)
                      +|+|. +++++.|.+||+|.....
T Consensus       643 ~~~G~~vvs~shD~sIRlwE~tde  666 (888)
T KOG0306|consen  643 SPNGSFVVSSSHDKSIRLWERTDE  666 (888)
T ss_pred             cCCCCeEEeccCCceeEeeeccCc
Confidence            99999 889999999999987653

>KOG0275|consensus

Probab=99.89  E-value=6.4e-23  Score=194.05  Aligned_cols=232  Identities=19%  Similarity=0.291  Sum_probs=187.1

Q ss_pred             CCCCCCCCEEEEEECCCeEEEEECCCCeEEEE--------EcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEE
Q psy7057          43 LSPGAKVNTLLSASWDMTAKLWCLESQQCKLT--------IRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFL  112 (557)
Q Consensus        43 ~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~--------l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~  112 (557)
                      ..++|++++|++||.||.|.+|+..+|+....        +.-+..+|.|+.|+.+. .+++|+.||.|++|. .+|.|+
T Consensus       219 A~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWri~tG~Cl  298 (508)
T KOG0275|consen  219 ARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVWRIETGQCL  298 (508)
T ss_pred             eeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEEEEecchHH
Confidence            45788999999999999999999999875433        34478899999999998 999999999999999 789999


Q ss_pred             EEEe-CCCCCEEEEEEeCCCe-EEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECC
Q psy7057         113 KTLT-GHTDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNK  188 (557)
Q Consensus       113 ~~l~-~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~  188 (557)
                      +.+. .|+..|+|+.|+.++. ++++|.|.++|+.-+++|+++..+++|++.|....|  +|..+++++.||+|++|+.+
T Consensus       299 RrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG~~iisaSsDgtvkvW~~K  378 (508)
T KOG0275|consen  299 RRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDDGHHIISASSDGTVKVWHGK  378 (508)
T ss_pred             HHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccchhHHHhcCccccccceEEcCCCCeEEEecCCccEEEecCc
Confidence            9887 8999999999998865 999999999999999999999999999999999999  88899999999999999976


Q ss_pred             CC---ceEee--CCccEEEEEEcCCCc--EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeC
Q psy7057         189 AQ---NSFMI--PAMSVWAVAILPNSD--IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSD  261 (557)
Q Consensus       189 ~~---~~~~~--~~~~v~~v~~~p~g~--l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~  261 (557)
                      +.   .+++.  ...+|.++...|...  +++|-..++|+|-++...............+...... ..+....+.+.+.
T Consensus       379 tteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~qGQvVrsfsSGkREgGdFi~~~-lSpkGewiYcigE  457 (508)
T KOG0275|consen  379 TTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQGQVVRSFSSGKREGGDFINAI-LSPKGEWIYCIGE  457 (508)
T ss_pred             chhhhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEeccceEEeeeccCCccCCceEEEE-ecCCCcEEEEEcc
Confidence            55   33332  345789999999876  8899999999999987533221111111111122222 2233345778899


Q ss_pred             CCcEEEEecCCChh
Q psy7057         262 DGIVRVFSANPDRQ  275 (557)
Q Consensus       262 DG~IrvW~~~~~~~  275 (557)
                      |+.+.-|.+..++.
T Consensus       458 D~vlYCF~~~sG~L  471 (508)
T KOG0275|consen  458 DGVLYCFSVLSGKL  471 (508)
T ss_pred             CcEEEEEEeecCce
Confidence            99999999887643

>KOG1332|consensus

Probab=99.89  E-value=1e-22  Score=186.38  Aligned_cols=222  Identities=18%  Similarity=0.229  Sum_probs=180.9

Q ss_pred             EEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC---------------------CCCCCCCCEEEEEECCCeEEE
Q psy7057           6 TALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND---------------------LSPGAKVNTLLSASWDMTAKL   63 (557)
Q Consensus         6 ~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~---------------------~~~~~~~~~l~sgs~Dg~i~i   63 (557)
                      ..-.+|.+.|.++...--|+ |+|+|.|++|||+....                     .+....|.+|++++.||.|.|
T Consensus         5 ~idt~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIi   84 (299)
T KOG1332|consen    5 TIDTQHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVII   84 (299)
T ss_pred             ehhhhhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEE
Confidence            34467999999988887787 99999999999998876                     222336899999999999999


Q ss_pred             EECCCCe--EEEEEcccCCcEEEEEEcCCC---EEEEEECCCeEEEEeCCCc----EEEEEeCCCCCEEEEEEeCC---C
Q psy7057          64 WCLESQQ--CKLTIRQHEMAVWGVIQLANG---IIVTGCADKTIKLHSEEGE----FLKTLTGHTDCVRGLAVLND---T  131 (557)
Q Consensus        64 wd~~~~~--~~~~l~~h~~~V~~l~~~~~~---~l~sgs~dg~I~vwd~~~~----~~~~l~~h~~~V~~l~~~~~---~  131 (557)
                      |.-++++  .......|...|++++|-|.+   .|++++.||.|.|.+.+..    ..+....|.-.|++++|.|.   |
T Consensus        85 Wke~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g  164 (299)
T KOG1332|consen   85 WKEENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPG  164 (299)
T ss_pred             EecCCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcCCCc
Confidence            9988774  445667899999999999966   8999999999999873222    23445689999999999875   2


Q ss_pred             ------------eEEEEECCCeEEEEECCCC--eEEEEEeCCCCcEEEEEEcC------CEEEEEeCCCeEEEEECCCC-
Q psy7057         132 ------------DFVSCSNDASIRVWDSTTG--KCVHTMYGHPNFIYSVAAHG------DLITSGGEDQCVCVYQNKAQ-  190 (557)
Q Consensus       132 ------------~lvs~s~Dg~I~vwd~~~~--~~~~~~~~h~~~V~~l~~~~------~~l~s~s~Dg~I~iwd~~~~-  190 (557)
                                  +|++|+.|..|+||+..++  +..++|.+|.+.|+.+++.+      ..|++||.||++.||..+.. 
T Consensus       165 ~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~~e~  244 (299)
T KOG1332|consen  165 SLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKDEEY  244 (299)
T ss_pred             cccccCcccccceeeccCCccceeeeecCCcchhhhhhhhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEecCcc
Confidence                        4899999999999998764  45566899999999999922      37999999999999985422 


Q ss_pred             -----ceEeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCC
Q psy7057         191 -----NSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANP  227 (557)
Q Consensus       191 -----~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~  227 (557)
                           ..+......++.++|++.|. |+.++.|+.|.+|.-+.
T Consensus       245 e~wk~tll~~f~~~~w~vSWS~sGn~LaVs~GdNkvtlwke~~  287 (299)
T KOG1332|consen  245 EPWKKTLLEEFPDVVWRVSWSLSGNILAVSGGDNKVTLWKENV  287 (299)
T ss_pred             CcccccccccCCcceEEEEEeccccEEEEecCCcEEEEEEeCC
Confidence                 34445667899999999999 77889999999997553

>KOG0289|consensus

Probab=99.89  E-value=2.4e-21  Score=190.02  Aligned_cols=257  Identities=17%  Similarity=0.240  Sum_probs=210.3

Q ss_pred             ccEEEEEEcCCC-cEEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEE
Q psy7057          13 MDVRSLSVTPDG-CILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTI   75 (557)
Q Consensus        13 ~~V~~l~~spdg-~l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l   75 (557)
                      ..++++...|.. .+++|+.|.++.++|...                +.+++....+++++.|..|++|......+....
T Consensus       220 pgi~ald~~~s~~~ilTGG~d~~av~~d~~s~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s~~~~~  299 (506)
T KOG0289|consen  220 PGITALDIIPSSSKILTGGEDKTAVLFDKPSNQILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSSEPTSS  299 (506)
T ss_pred             CCeeEEeecCCCCcceecCCCCceEEEecchhhhhhhccCcceEEEEEEeccchhheeecCCcceEEeeccccccCcccc
Confidence            568888888873 489999999999999876                566778889999999999999999888888888


Q ss_pred             cccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeC--CCCCEEEEEEeCCCeE-EEEECCCeEEEEECCCC
Q psy7057          76 RQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTG--HTDCVRGLAVLNDTDF-VSCSNDASIRVWDSTTG  150 (557)
Q Consensus        76 ~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~--h~~~V~~l~~~~~~~l-vs~s~Dg~I~vwd~~~~  150 (557)
                      +.|..+|+.+...|.| +|++++.|++..+.| .++.++.....  ..-.+++.+|+|||.| .+|+.|+.+++||+.++
T Consensus       300 ~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks~  379 (506)
T KOG0289|consen  300 RPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQ  379 (506)
T ss_pred             ccccccceeeeeccCCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEEEEcCCc
Confidence            9999999999999999 999999999999999 55665554442  2245899999999984 59999999999999999


Q ss_pred             eEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC---ceEeeCC-ccEEEEEEcCCCc-EEEEEcCCcEEEE
Q psy7057         151 KCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ---NSFMIPA-MSVWAVAILPNSD-IVTGSSDGIVRVF  223 (557)
Q Consensus       151 ~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~-~~v~~v~~~p~g~-l~sg~~Dg~I~iw  223 (557)
                      ..+..|.+|+++|.+++|  +|-+|+++++|+.|++||++..   +++.... ..+.+++|.+.|. ++++++|=.|+++
T Consensus       380 ~~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~~l~~~~~v~s~~fD~SGt~L~~~g~~l~Vy~~  459 (506)
T KOG0289|consen  380 TNVAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKNFKTIQLDEKKEVNSLSFDQSGTYLGIAGSDLQVYIC  459 (506)
T ss_pred             cccccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehhhcccceeeccccccceeEEEcCCCCeEEeecceeEEEEE
Confidence            999999999999999999  6779999999999999998877   4444333 3699999999999 7788888888888


Q ss_pred             ecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEec
Q psy7057         224 SANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSA  270 (557)
Q Consensus       224 d~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~  270 (557)
                      +-.+..-........+.+..+.+.+... ...++++|.|..+|++.+
T Consensus       460 ~k~~k~W~~~~~~~~~sg~st~v~Fg~~-aq~l~s~smd~~l~~~a~  505 (506)
T KOG0289|consen  460 KKKTKSWTEIKELADHSGLSTGVRFGEH-AQYLASTSMDAILRLYAL  505 (506)
T ss_pred             ecccccceeeehhhhcccccceeeeccc-ceEEeeccchhheEEeec
Confidence            7555444334444455555556655444 446899999999999864

>KOG0305|consensus

Probab=99.89  E-value=9.5e-22  Score=202.75  Aligned_cols=217  Identities=21%  Similarity=0.277  Sum_probs=186.4

Q ss_pred             ccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC-----------------CCCCCCCCEEEEEECCCeEEEEECCCCe
Q psy7057           9 YGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND-----------------LSPGAKVNTLLSASWDMTAKLWCLESQQ   70 (557)
Q Consensus         9 ~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~-----------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~   70 (557)
                      ..+...|+++.|+++|. |++|..+|.|.|||..+                 +++.  ...+.+|+.|+.|..+|++..+
T Consensus       214 ~~~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~~~~~~h~~rvg~laW~--~~~lssGsr~~~I~~~dvR~~~  291 (484)
T KOG0305|consen  214 SFGEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTRTLRGSHASRVGSLAWN--SSVLSSGSRDGKILNHDVRISQ  291 (484)
T ss_pred             ecCCCceEEEEECCCCCEEEEeecCCeEEEEehhhccccccccCCcCceeEEEecc--CceEEEecCCCcEEEEEEecch
Confidence            33488999999999999 99999999999999766                 3343  6789999999999999998876


Q ss_pred             EEEE-EcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeC-CCcEEEEEeCCCCCEEEEEEeCC--CeEEE--EECCCeEE
Q psy7057          71 CKLT-IRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSE-EGEFLKTLTGHTDCVRGLAVLND--TDFVS--CSNDASIR  143 (557)
Q Consensus        71 ~~~~-l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~-~~~~~~~l~~h~~~V~~l~~~~~--~~lvs--~s~Dg~I~  143 (557)
                      .... +.+|...|+.+.|++++ ++++|+.|+.+.|||. ...+...+..|...|.+++|+|-  +.|++  |+.|++|+
T Consensus       292 ~~~~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~  371 (484)
T KOG0305|consen  292 HVVSTLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIK  371 (484)
T ss_pred             hhhhhhhcccceeeeeEECCCCCeeccCCCccceEeccCCCccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEE
Confidence            5554 88999999999999999 9999999999999994 66788899999999999999997  45775  45799999


Q ss_pred             EEECCCCeEEEEEeCCCCcEEEEEEc--CCEEEE--EeCCCeEEEEECCCC---ceEeeCCccEEEEEEcCCCc-EEEEE
Q psy7057         144 VWDSTTGKCVHTMYGHPNFIYSVAAH--GDLITS--GGEDQCVCVYQNKAQ---NSFMIPAMSVWAVAILPNSD-IVTGS  215 (557)
Q Consensus       144 vwd~~~~~~~~~~~~h~~~V~~l~~~--~~~l~s--~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p~g~-l~sg~  215 (557)
                      +||..+++.+..+. -...|.+|.|.  .+-|++  |..+..|.||+..+.   ..+.+|...|..++++|+|. +++|+
T Consensus       372 fwn~~~g~~i~~vd-tgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~~~~~~l~gH~~RVl~la~SPdg~~i~t~a  450 (484)
T KOG0305|consen  372 FWNTNTGARIDSVD-TGSQVCSLIWSKKYKELLSTHGYSENQITLWKYPSMKLVAELLGHTSRVLYLALSPDGETIVTGA  450 (484)
T ss_pred             EEEcCCCcEecccc-cCCceeeEEEcCCCCEEEEecCCCCCcEEEEeccccceeeeecCCcceeEEEEECCCCCEEEEec
Confidence            99999999988875 56899999993  333443  346778999996554   77889999999999999998 99999


Q ss_pred             cCCcEEEEecCCC
Q psy7057         216 SDGIVRVFSANPD  228 (557)
Q Consensus       216 ~Dg~I~iwd~~~~  228 (557)
                      .|.++++|++-..
T Consensus       451 ~DETlrfw~~f~~  463 (484)
T KOG0305|consen  451 ADETLRFWNLFDE  463 (484)
T ss_pred             ccCcEEeccccCC
Confidence            9999999998764

>KOG0305|consensus

Probab=99.89  E-value=1.4e-21  Score=201.41  Aligned_cols=251  Identities=20%  Similarity=0.281  Sum_probs=207.0

Q ss_pred             EEEcCCCcEEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcc-cCC
Q psy7057          18 LSVTPDGCILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQ-HEM   80 (557)
Q Consensus        18 l~~spdg~l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~-h~~   80 (557)
                      +.|+..+ ++..+....|.+|+..+                +.++++|.+|++|..+|.|.|||..+.+.+.++.+ |..
T Consensus       183 ldWss~n-~laValg~~vylW~~~s~~v~~l~~~~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~~~~~~h~~  261 (484)
T KOG0305|consen  183 LDWSSAN-VLAVALGQSVYLWSASSGSVTELCSFGEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTRTLRGSHAS  261 (484)
T ss_pred             hhcccCC-eEEEEecceEEEEecCCCceEEeEecCCCceEEEEECCCCCEEEEeecCCeEEEEehhhccccccccCCcCc
Confidence            3455433 44455566788887655                67788999999999999999999999999999998 999


Q ss_pred             cEEEEEEcCCCEEEEEECCCeEEEEeC-CCc-EEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEEEEECCCCeEEEEEe
Q psy7057          81 AVWGVIQLANGIIVTGCADKTIKLHSE-EGE-FLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHTMY  157 (557)
Q Consensus        81 ~V~~l~~~~~~~l~sgs~dg~I~vwd~-~~~-~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~  157 (557)
                      .|-+++|. ...+.+|+.|+.|..+|. ..+ ...++.+|...|+.+.|++++. +++|+.|+.+.|||.....++..+.
T Consensus       262 rvg~laW~-~~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~~~~~  340 (484)
T KOG0305|consen  262 RVGSLAWN-SSVLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPEPKFTFT  340 (484)
T ss_pred             eeEEEecc-CceEEEecCCCcEEEEEEecchhhhhhhhcccceeeeeEECCCCCeeccCCCccceEeccCCCccccEEEe
Confidence            99999998 558999999999999993 222 2335889999999999999976 7899999999999998889999999


Q ss_pred             CCCCcEEEEEE---cCCEEEEEe--CCCeEEEEECCCCceEee--CCccEEEEEEcCCCc-EEE--EEcCCcEEEEecCC
Q psy7057         158 GHPNFIYSVAA---HGDLITSGG--EDQCVCVYQNKAQNSFMI--PAMSVWAVAILPNSD-IVT--GSSDGIVRVFSANP  227 (557)
Q Consensus       158 ~h~~~V~~l~~---~~~~l~s~s--~Dg~I~iwd~~~~~~~~~--~~~~v~~v~~~p~g~-l~s--g~~Dg~I~iwd~~~  227 (557)
                      .|.+.|.+++|   ...+||+|+  .|++|++|+..+...+..  ....|.+|.|++..+ |++  |-.++.|.||+..+
T Consensus       341 ~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vdtgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps  420 (484)
T KOG0305|consen  341 EHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSVDTGSQVCSLIWSKKYKELLSTHGYSENQITLWKYPS  420 (484)
T ss_pred             ccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEecccccCCceeeEEEcCCCCEEEEecCCCCCcEEEEeccc
Confidence            99999999999   456888875  799999999877744443  345799999999986 654  44588999999987


Q ss_pred             CCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCC
Q psy7057         228 DRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPD  273 (557)
Q Consensus       228 ~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~  273 (557)
                      ...  .....+|...|..+...++.. .+++|+.|.++|+|++-+.
T Consensus       421 ~~~--~~~l~gH~~RVl~la~SPdg~-~i~t~a~DETlrfw~~f~~  463 (484)
T KOG0305|consen  421 MKL--VAELLGHTSRVLYLALSPDGE-TIVTGAADETLRFWNLFDE  463 (484)
T ss_pred             cce--eeeecCCcceeEEEEECCCCC-EEEEecccCcEEeccccCC
Confidence            544  345567888888888887754 5899999999999998765

>KOG1408|consensus

Probab=99.88  E-value=2.7e-21  Score=199.22  Aligned_cols=265  Identities=18%  Similarity=0.256  Sum_probs=216.3

Q ss_pred             eccCcccEEEEEEcC------------CCcEEEEECCCcEEEEcCCC---------------------------------
Q psy7057           8 LYGHSMDVRSLSVTP------------DGCILSASRDKSAKLWKPND---------------------------------   42 (557)
Q Consensus         8 l~gH~~~V~~l~~sp------------dg~l~sgs~Dg~V~iWd~~~---------------------------------   42 (557)
                      +--|+..|+++.-.|            .+.++|+|.|++||+|++..                                 
T Consensus       365 ~lyHS~ciW~Ve~~p~nv~~~~~aclp~~cF~TCSsD~TIRlW~l~~ctnn~vyrRNils~~l~ki~y~d~~~q~~~d~~  444 (1080)
T KOG1408|consen  365 MLYHSACIWDVENLPCNVHSPTAACLPRGCFTTCSSDGTIRLWDLAFCTNNQVYRRNILSANLSKIPYEDSTQQIMHDAS  444 (1080)
T ss_pred             eeeccceeeeeccccccccCcccccCCccceeEecCCCcEEEeecccccccceeecccchhhhhcCccccCchhhhhhcc
Confidence            345888888887655            24488999999999999875                                 


Q ss_pred             --------------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCC----CEEEEEEC
Q psy7057          43 --------------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLAN----GIIVTGCA   98 (557)
Q Consensus        43 --------------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~----~~l~sgs~   98 (557)
                                          ++.+|++++|++|..-|++++|++.+.+....+..|+..|.|+.|+..    .+|++++.
T Consensus       445 ~~~fdka~~s~~d~r~G~R~~~vSp~gqhLAsGDr~GnlrVy~Lq~l~~~~~~eAHesEilcLeyS~p~~~~kLLASasr  524 (1080)
T KOG1408|consen  445 AGIFDKALVSTCDSRFGFRALAVSPDGQHLASGDRGGNLRVYDLQELEYTCFMEAHESEILCLEYSFPVLTNKLLASASR  524 (1080)
T ss_pred             CCcccccchhhcCcccceEEEEECCCcceecccCccCceEEEEehhhhhhhheecccceeEEEeecCchhhhHhhhhccC
Confidence                                677889999999999999999999998989999999999999999863    28999999


Q ss_pred             CCeEEEEe--CCCcEEEEEeCCCCCEEEEEEeCCC---eEEEEECCCeEEEEECCCCeEEEEEeCC-----CCcEEEEEE
Q psy7057          99 DKTIKLHS--EEGEFLKTLTGHTDCVRGLAVLNDT---DFVSCSNDASIRVWDSTTGKCVHTMYGH-----PNFIYSVAA  168 (557)
Q Consensus        99 dg~I~vwd--~~~~~~~~l~~h~~~V~~l~~~~~~---~lvs~s~Dg~I~vwd~~~~~~~~~~~~h-----~~~V~~l~~  168 (557)
                      |..|+|+|  .+..++.++.+|...|+++.|...+   ++++++.|+.|.+--.+.......+..|     ...++.|+.
T Consensus       525 dRlIHV~Dv~rny~l~qtld~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~V  604 (1080)
T KOG1408|consen  525 DRLIHVYDVKRNYDLVQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAV  604 (1080)
T ss_pred             CceEEEEecccccchhhhhcccccceeEEEEeecCCceEEEeccCchhhheehhccccCceeccccccccccceEEEeee
Confidence            99999999  5567789999999999999998765   3899999998876543322222223222     457788888


Q ss_pred             c--CCEEEEEeCCCeEEEEECCCC---ceEe---eCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHhcc
Q psy7057         169 H--GDLITSGGEDQCVCVYQNKAQ---NSFM---IPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQY  239 (557)
Q Consensus       169 ~--~~~l~s~s~Dg~I~iwd~~~~---~~~~---~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~  239 (557)
                      +  .+++++++.|+.|+||++...   +.++   .|.+....+...|.|- +++.+.|.++.++|.-+++..  ....+|
T Consensus       605 dp~~k~v~t~cQDrnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcv--A~m~GH  682 (1080)
T KOG1408|consen  605 DPTSKLVVTVCQDRNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECV--AQMTGH  682 (1080)
T ss_pred             CCCcceEEEEecccceEEEeccccceeeeecccccCCCceEEEEECCCccEEEEeecCCceEEEEeccchhh--hhhcCc
Confidence            4  458999999999999997766   3333   3556788899999998 889999999999999888754  445678


Q ss_pred             cceeEEEeccCCCceeEEEEeCCCcEEEEecCCChh
Q psy7057         240 AEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQ  275 (557)
Q Consensus       240 ~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~~~  275 (557)
                      .+.++.+.+.++-. .+|+.+.||.|.||.+.....
T Consensus       683 sE~VTG~kF~nDCk-HlISvsgDgCIFvW~lp~~mi  717 (1080)
T KOG1408|consen  683 SEAVTGVKFLNDCK-HLISVSGDGCIFVWKLPLTMI  717 (1080)
T ss_pred             chheeeeeecccch-hheeecCCceEEEEECchhHh
Confidence            88899999887765 589999999999999987543

>KOG0283|consensus

Probab=99.88  E-value=1.3e-21  Score=206.61  Aligned_cols=229  Identities=17%  Similarity=0.224  Sum_probs=180.4

Q ss_pred             CCCCCCCCEEEEEECCCeEEEEECCC--------------------------------C---------------------
Q psy7057          43 LSPGAKVNTLLSASWDMTAKLWCLES--------------------------------Q---------------------   69 (557)
Q Consensus        43 ~~~~~~~~~l~sgs~Dg~i~iwd~~~--------------------------------~---------------------   69 (557)
                      +.|+++|.+||+|+.|+.|+||.+..                                .                     
T Consensus       273 mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~~~~~~s~~~~~p~  352 (712)
T KOG0283|consen  273 MKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSSRKGSQSPCVLLPL  352 (712)
T ss_pred             EEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCccccccccccccccccccccCCccccCCC
Confidence            56889999999999999999998654                                0                     


Q ss_pred             -------eEEEEEcccCCcEEEEEEcCCCEEEEEECCCeEEEEeC-CCcEEEEEeCCCCCEEEEEEeCC--CeEEEEECC
Q psy7057          70 -------QCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSE-EGEFLKTLTGHTDCVRGLAVLND--TDFVSCSND  139 (557)
Q Consensus        70 -------~~~~~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~-~~~~~~~l~~h~~~V~~l~~~~~--~~lvs~s~D  139 (557)
                             ++++.+.||.+.|..|.|+.+++|+++|.|+++|+|+. ...|+..|. |.+-|+|++|+|-  ..|++||-|
T Consensus       353 ~~f~f~ekP~~ef~GHt~DILDlSWSKn~fLLSSSMDKTVRLWh~~~~~CL~~F~-HndfVTcVaFnPvDDryFiSGSLD  431 (712)
T KOG0283|consen  353 KAFVFSEKPFCEFKGHTADILDLSWSKNNFLLSSSMDKTVRLWHPGRKECLKVFS-HNDFVTCVAFNPVDDRYFISGSLD  431 (712)
T ss_pred             ccccccccchhhhhccchhheecccccCCeeEeccccccEEeecCCCcceeeEEe-cCCeeEEEEecccCCCcEeecccc
Confidence                   13445678999999999999999999999999999994 556777776 9999999999986  448999999


Q ss_pred             CeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC-----ceEeeC------CccEEEEEEc
Q psy7057         140 ASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ-----NSFMIP------AMSVWAVAIL  206 (557)
Q Consensus       140 g~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~-----~~~~~~------~~~v~~v~~~  206 (557)
                      +.||||++...+.+.- ..-...|+++++  +|+..+.|+-+|.+++|++..+     ..+..+      ...|+.+.|.
T Consensus       432 ~KvRiWsI~d~~Vv~W-~Dl~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~rITG~Q~~  510 (712)
T KOG0283|consen  432 GKVRLWSISDKKVVDW-NDLRDLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLHNKKKKQGKRITGLQFF  510 (712)
T ss_pred             cceEEeecCcCeeEee-hhhhhhheeEEeccCCceEEEEEeccEEEEEEccCCeEEEeeeEeeccCccccCceeeeeEec
Confidence            9999999976665543 344589999999  8999999999999999997665     122222      2379999999


Q ss_pred             CCCc--EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCCh
Q psy7057         207 PNSD--IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDR  274 (557)
Q Consensus       207 p~g~--l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~~  274 (557)
                      |...  +++.+.|..|||+|.+...+............-....+.. +...+|++|.|..|.||+..+..
T Consensus       511 p~~~~~vLVTSnDSrIRI~d~~~~~lv~KfKG~~n~~SQ~~Asfs~-Dgk~IVs~seDs~VYiW~~~~~~  579 (712)
T KOG0283|consen  511 PGDPDEVLVTSNDSRIRIYDGRDKDLVHKFKGFRNTSSQISASFSS-DGKHIVSASEDSWVYIWKNDSFN  579 (712)
T ss_pred             CCCCCeEEEecCCCceEEEeccchhhhhhhcccccCCcceeeeEcc-CCCEEEEeecCceEEEEeCCCCc
Confidence            8765  9999999999999997666554333222222222223333 56678999999999999986654

>KOG0643|consensus

Probab=99.88  E-value=3.5e-21  Score=178.43  Aligned_cols=223  Identities=20%  Similarity=0.276  Sum_probs=180.8

Q ss_pred             EEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC---------------CCCCCCCCEEEEEEC-----CCeEE
Q psy7057           4 LSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND---------------LSPGAKVNTLLSASW-----DMTAK   62 (557)
Q Consensus         4 l~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~---------------~~~~~~~~~l~sgs~-----Dg~i~   62 (557)
                      ..-++.||++.|+|+..+.+.+ |+||+.|.++++||+.+               +.++..+++++....     .+.|.
T Consensus        44 rlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~tGk~la~~k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~  123 (327)
T KOG0643|consen   44 RLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVETGKQLATWKTNSPVKRVDFSFGGNLILASTDKQMGYTCFVS  123 (327)
T ss_pred             eeeeecCCCceEEEEEecCCcceeeeccccceeEEEEcCCCcEEEEeecCCeeEEEeeccCCcEEEEEehhhcCcceEEE
Confidence            4567899999999999999887 99999999999999987               566777887777654     46799


Q ss_pred             EEECC-------CCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCC-cEEEEEeCCCCCEEEEEEeCCCe
Q psy7057          63 LWCLE-------SQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEG-EFLKTLTGHTDCVRGLAVLNDTD  132 (557)
Q Consensus        63 iwd~~-------~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~-~~~~~l~~h~~~V~~l~~~~~~~  132 (557)
                      ++|++       +.++...+..+...++.+.|.|-+ .|++|..||.|..|| .+| +.+..-..|...|+.|+++++..
T Consensus       124 ~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T  203 (327)
T KOG0643|consen  124 VFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRT  203 (327)
T ss_pred             EEEccCChhhhcccCceEEecCCccceeeeeecccCCEEEEecCCCcEEEEEcccCceeeechhhhccccccccccCCcc
Confidence            99987       446788888899999999999987 999999999999999 454 44566678999999999999966


Q ss_pred             -EEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEEcC--CEEEEEeCCCeE--------------EEEEC---CCCce
Q psy7057         133 -FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHG--DLITSGGEDQCV--------------CVYQN---KAQNS  192 (557)
Q Consensus       133 -lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~~~--~~l~s~s~Dg~I--------------~iwd~---~~~~~  192 (557)
                       |+++|.|.+.++||+++.+++.++. ...+|.+.++.+  +.++.|+.....              |+|++   ++...
T Consensus       204 ~FiT~s~Dttakl~D~~tl~v~Kty~-te~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigr  282 (327)
T KOG0643|consen  204 YFITGSKDTTAKLVDVRTLEVLKTYT-TERPVNTAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGR  282 (327)
T ss_pred             eEEecccCccceeeeccceeeEEEee-ecccccceecccccceEEecCCceeeeeeeecccccchhhhHHHHHHHHHhcc
Confidence             8899999999999999999999987 466777777733  344444332211              22221   11146


Q ss_pred             EeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCC
Q psy7057         193 FMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANP  227 (557)
Q Consensus       193 ~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~  227 (557)
                      +++|-++|++|+|+|+|+ +++|++||.||+...+.
T Consensus       283 vkGHFGPINsvAfhPdGksYsSGGEDG~VR~h~Fd~  318 (327)
T KOG0643|consen  283 VKGHFGPINSVAFHPDGKSYSSGGEDGYVRLHHFDS  318 (327)
T ss_pred             ccccccCcceeEECCCCcccccCCCCceEEEEEecc
Confidence            788999999999999999 89999999999986654

>KOG0641|consensus

Probab=99.88  E-value=3.6e-20  Score=167.68  Aligned_cols=219  Identities=18%  Similarity=0.173  Sum_probs=180.2

Q ss_pred             eccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC---------------------CC----CCCCCCEEEEEE-CCCe
Q psy7057           8 LYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND---------------------LS----PGAKVNTLLSAS-WDMT   60 (557)
Q Consensus         8 l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~---------------------~~----~~~~~~~l~sgs-~Dg~   60 (557)
                      -+.|.+.|.|.+|+|+|. |++||.|.+|++-..+.                     ++    +...+..|++++ .|..
T Consensus        85 ~khhkgsiyc~~ws~~geliatgsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~  164 (350)
T KOG0641|consen   85 NKHHKGSIYCTAWSPCGELIATGSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCK  164 (350)
T ss_pred             ccccCccEEEEEecCccCeEEecCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcce
Confidence            356899999999999999 78999999999976654                     11    122345566654 5788


Q ss_pred             EEEEECCCCeEEEEEcccCCcEEEEEEcCCCEEEEEECCCeEEEEeC-CCcEEEEEeC-------CCCCEEEEEEeCCCe
Q psy7057          61 AKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSE-EGEFLKTLTG-------HTDCVRGLAVLNDTD  132 (557)
Q Consensus        61 i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~-~~~~~~~l~~-------h~~~V~~l~~~~~~~  132 (557)
                      |.+-|..+|+..+.+.+|.+.|.++---..-.+++|+.|.+|++||+ -..++.++..       ..+.|.++++.|.|+
T Consensus       165 iy~tdc~~g~~~~a~sghtghilalyswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgr  244 (350)
T KOG0641|consen  165 IYITDCGRGQGFHALSGHTGHILALYSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGR  244 (350)
T ss_pred             EEEeecCCCCcceeecCCcccEEEEEEecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcc
Confidence            88889999999999999999998875443449999999999999994 4455665532       236799999999998


Q ss_pred             -EEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEEcC--CEEEEEeCCCeEEEEECCCC-------ceEeeCCccEEE
Q psy7057         133 -FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHG--DLITSGGEDQCVCVYQNKAQ-------NSFMIPAMSVWA  202 (557)
Q Consensus       133 -lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~~~--~~l~s~s~Dg~I~iwd~~~~-------~~~~~~~~~v~~  202 (557)
                       +++|-.|....+||++.++.++.+..|+..|+|+.|.+  .++++|+.|..|++=|+...       .....|...+..
T Consensus       245 ll~sg~~dssc~lydirg~r~iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdlqgdla~el~~~vv~ehkdk~i~  324 (350)
T KOG0641|consen  245 LLASGHADSSCMLYDIRGGRMIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDLAHELPIMVVAEHKDKAIQ  324 (350)
T ss_pred             eeeeccCCCceEEEEeeCCceeeeeCCCccceeEEEeCCCceEEEEecccceEEEeecccchhhcCceEEEEeccCceEE
Confidence             55899999999999999999999999999999999944  48999999999999996432       334567888889


Q ss_pred             EEEcCCCc-EEEEEcCCcEEEEecC
Q psy7057         203 VAILPNSD-IVTGSSDGIVRVFSAN  226 (557)
Q Consensus       203 v~~~p~g~-l~sg~~Dg~I~iwd~~  226 (557)
                      +.|+|..- |++.+.|.++.+|.++
T Consensus       325 ~rwh~~d~sfisssadkt~tlwa~~  349 (350)
T KOG0641|consen  325 CRWHPQDFSFISSSADKTATLWALN  349 (350)
T ss_pred             EEecCccceeeeccCcceEEEeccC
Confidence            99999876 9999999999999765

>KOG0289|consensus

Probab=99.88  E-value=4.9e-21  Score=187.93  Aligned_cols=223  Identities=21%  Similarity=0.280  Sum_probs=189.4

Q ss_pred             EEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEE
Q psy7057           3 KLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWC   65 (557)
Q Consensus         3 kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd   65 (557)
                      ++..+|+||...|+.+.|+|+.. +++++.|-.|+||....                ++.++.+.+|++++.|++....|
T Consensus       252 q~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s~~~~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd  331 (506)
T KOG0289|consen  252 QILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSSEPTSSRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSD  331 (506)
T ss_pred             hhhhhccCcceEEEEEEeccchhheeecCCcceEEeeccccccCccccccccccceeeeeccCCcEEEEecCCceEEEEE
Confidence            35678999999999999999987 88999999999998755                67788899999999999999999


Q ss_pred             CCCCeEEEEEccc--CCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCC
Q psy7057          66 LESQQCKLTIRQH--EMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDA  140 (557)
Q Consensus        66 ~~~~~~~~~l~~h--~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg  140 (557)
                      ++++.++......  .-.+++.+|+||| ++.+|..|+.++||| .++..+..|.+|+++|.+++|+.+|. +++++.|+
T Consensus       332 ~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks~~~~a~Fpght~~vk~i~FsENGY~Lat~add~  411 (506)
T KOG0289|consen  332 ISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQTNVAKFPGHTGPVKAISFSENGYWLATAADDG  411 (506)
T ss_pred             ccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEEEEcCCccccccCCCCCCceeEEEeccCceEEEEEecCC
Confidence            9999887766542  3458999999999 889999999999999 45667888999999999999999998 66999999


Q ss_pred             eEEEEECCCCeEEEEEeCCC-CcEEEEEE--cCCEEEEEeCCCeEEEEECCCC-----ceEeeCCccEEEEEEcCCCc-E
Q psy7057         141 SIRVWDSTTGKCVHTMYGHP-NFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ-----NSFMIPAMSVWAVAILPNSD-I  211 (557)
Q Consensus       141 ~I~vwd~~~~~~~~~~~~h~-~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~-----~~~~~~~~~v~~v~~~p~g~-l  211 (557)
                      .|++||+|..+...++.... ..+.+++|  .|.+|+.++.|=.|++++-.+.     ..+..|.+..+.+.|....+ +
T Consensus       412 ~V~lwDLRKl~n~kt~~l~~~~~v~s~~fD~SGt~L~~~g~~l~Vy~~~k~~k~W~~~~~~~~~sg~st~v~Fg~~aq~l  491 (506)
T KOG0289|consen  412 SVKLWDLRKLKNFKTIQLDEKKEVNSLSFDQSGTYLGIAGSDLQVYICKKKTKSWTEIKELADHSGLSTGVRFGEHAQYL  491 (506)
T ss_pred             eEEEEEehhhcccceeeccccccceeEEEcCCCCeEEeecceeEEEEEecccccceeeehhhhcccccceeeecccceEE
Confidence            99999999988887776432 36888888  6789999998888888873322     45555666788899988887 8


Q ss_pred             EEEEcCCcEEEEec
Q psy7057         212 VTGSSDGIVRVFSA  225 (557)
Q Consensus       212 ~sg~~Dg~I~iwd~  225 (557)
                      ++++.|..++++.+
T Consensus       492 ~s~smd~~l~~~a~  505 (506)
T KOG0289|consen  492 ASTSMDAILRLYAL  505 (506)
T ss_pred             eeccchhheEEeec
Confidence            89999999998864

>KOG0269|consensus

Probab=99.88  E-value=8.4e-22  Score=205.29  Aligned_cols=219  Identities=17%  Similarity=0.251  Sum_probs=182.0

Q ss_pred             CCCEEEEEECCCeEEEEECCC---CeEEEEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEe-CCCcEEEEEeCCCCC
Q psy7057          48 KVNTLLSASWDMTAKLWCLES---QQCKLTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHS-EEGEFLKTLTGHTDC  121 (557)
Q Consensus        48 ~~~~l~sgs~Dg~i~iwd~~~---~~~~~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~  121 (557)
                      ..++|++++..|.|.+||+..   .+.+..|..|+..+.++.|++..  +|++||.||+|++|| ...+...++.+....
T Consensus        99 ~~NlIAT~s~nG~i~vWdlnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~nSES  178 (839)
T KOG0269|consen   99 YSNLIATCSTNGVISVWDLNKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTFRSNSES  178 (839)
T ss_pred             hhhhheeecCCCcEEEEecCccccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecccccccccccchh
Confidence            357899999999999999987   45667889999999999999955  999999999999999 455667788888999


Q ss_pred             EEEEEEeCC--CeEEEEECCCeEEEEECCCC-eEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC---ceE
Q psy7057         122 VRGLAVLND--TDFVSCSNDASIRVWDSTTG-KCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ---NSF  193 (557)
Q Consensus       122 V~~l~~~~~--~~lvs~s~Dg~I~vwd~~~~-~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~---~~~  193 (557)
                      |+.+.|+|.  ..|+++...|.+++||+|.. ++...+..|.++|.|+.|  +..+|+|||.|+.|+||+....   ...
T Consensus       179 iRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~~~~~  258 (839)
T KOG0269|consen  179 IRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDSRAKPKH  258 (839)
T ss_pred             hhceeeccCCCceEEEecCCceEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeecCCCccEEEEeccCCCcccee
Confidence            999999987  45999999999999999865 577888899999999999  5569999999999999997644   222


Q ss_pred             e-eCCccEEEEEEcCCCc--EEEEEc--CCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEE
Q psy7057         194 M-IPAMSVWAVAILPNSD--IVTGSS--DGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRV  267 (557)
Q Consensus       194 ~-~~~~~v~~v~~~p~g~--l~sg~~--Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~Irv  267 (557)
                      . ....+|.+|.|-|...  |++++.  |-.|+|||++..-.. ......|...++.++|...+...+.++|.||+|..
T Consensus       259 tInTiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRPYIP-~~t~~eH~~~vt~i~W~~~d~~~l~s~sKD~tv~q  336 (839)
T KOG0269|consen  259 TINTIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRRPYIP-YATFLEHTDSVTGIAWDSGDRINLWSCSKDGTVLQ  336 (839)
T ss_pred             EEeecceeeeeeeccCccchhhhhhccccceEEEEeecccccc-ceeeeccCccccceeccCCCceeeEeecCccHHHH
Confidence            2 2345899999999977  777664  889999999865433 34455677888889998888888899999997643

>KOG0299|consensus

Probab=99.88  E-value=1.2e-21  Score=193.69  Aligned_cols=230  Identities=22%  Similarity=0.294  Sum_probs=189.5

Q ss_pred             CCCCCCCCEEEEEECCCeEEEEECCCCeEE----EE-------------E-cccCCcEEEEEEcCCC-EEEEEECCCeEE
Q psy7057          43 LSPGAKVNTLLSASWDMTAKLWCLESQQCK----LT-------------I-RQHEMAVWGVIQLANG-IIVTGCADKTIK  103 (557)
Q Consensus        43 ~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~----~~-------------l-~~h~~~V~~l~~~~~~-~l~sgs~dg~I~  103 (557)
                      +..+++..+.++++.+++|.-|++.+++..    .+             - ..|...+.+++.++++ +|++|+.|..|.
T Consensus       148 vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dgkylatgg~d~~v~  227 (479)
T KOG0299|consen  148 VALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDGKYLATGGRDRHVQ  227 (479)
T ss_pred             EEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCCcEEEecCCCceEE
Confidence            456678899999999999999999887632    01             1 2678889999999999 999999999999


Q ss_pred             EEe-CCCcEEEEEeCCCCCEEEEEEeCC-CeEEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCC
Q psy7057         104 LHS-EEGEFLKTLTGHTDCVRGLAVLND-TDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGED  179 (557)
Q Consensus       104 vwd-~~~~~~~~l~~h~~~V~~l~~~~~-~~lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~D  179 (557)
                      ||+ .+.+.++.+.+|.+.|.+++|-.. .+++++|.|++|++|++.....+.++.+|.+.|.+|..  -++.+-+|+.|
T Consensus       228 Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vetlyGHqd~v~~IdaL~reR~vtVGgrD  307 (479)
T KOG0299|consen  228 IWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVETLYGHQDGVLGIDALSRERCVTVGGRD  307 (479)
T ss_pred             EecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHHHHHHhCCccceeeechhcccceEEecccc
Confidence            999 677889999999999999999866 55999999999999999998999999999999999998  34455566699


Q ss_pred             CeEEEEECCCC--ceEeeCCccEEEEEEcCCCcEEEEEcCCcEEEEecCCCCcchhHHHhccc----------ceeEEEe
Q psy7057         180 QCVCVYQNKAQ--NSFMIPAMSVWAVAILPNSDIVTGSSDGIVRVFSANPDRQAEDAVQAQYA----------EEVKKLK  247 (557)
Q Consensus       180 g~I~iwd~~~~--~~~~~~~~~v~~v~~~p~g~l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~----------~~v~~l~  247 (557)
                      +++++|++...  ..+.++...+-|++|..+..|++|+.+|.|.+|++...+++......+..          ..++++.
T Consensus       308 rT~rlwKi~eesqlifrg~~~sidcv~~In~~HfvsGSdnG~IaLWs~~KKkplf~~~~AHgv~~~~~~~~~~~Witsla  387 (479)
T KOG0299|consen  308 RTVRLWKIPEESQLIFRGGEGSIDCVAFINDEHFVSGSDNGSIALWSLLKKKPLFTSRLAHGVIPELDPVNGNFWITSLA  387 (479)
T ss_pred             ceeEEEeccccceeeeeCCCCCeeeEEEecccceeeccCCceEEEeeecccCceeEeeccccccCCccccccccceeeeE
Confidence            99999997554  55667788999999999999999999999999999877665332221111          1455666


Q ss_pred             ccCCCceeEEEEeCCCcEEEEecCCC
Q psy7057         248 SANEQEIGGVKVSDDGIVRVFSANPD  273 (557)
Q Consensus       248 ~~~~~~~~~vs~s~DG~IrvW~~~~~  273 (557)
                      ..+... .+++||.+|.||+|.++++
T Consensus       388 ~i~~sd-L~asGS~~G~vrLW~i~~g  412 (479)
T KOG0299|consen  388 VIPGSD-LLASGSWSGCVRLWKIEDG  412 (479)
T ss_pred             ecccCc-eEEecCCCCceEEEEecCC
Confidence            555444 5899999999999999876

>KOG0973|consensus

Probab=99.87  E-value=8e-21  Score=205.41  Aligned_cols=225  Identities=19%  Similarity=0.269  Sum_probs=191.6

Q ss_pred             EEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------------------------CCCCCC
Q psy7057           4 LSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------------------------LSPGAK   48 (557)
Q Consensus         4 l~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------------------------~~~~~~   48 (557)
                      +..+...|.+.|+|+.|+|||+ ||+||.|+.|.||+...                                  +.++|+
T Consensus        61 ~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~  140 (942)
T KOG0973|consen   61 HLCTMDDHDGSVNCVRFSPDGSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPD  140 (942)
T ss_pred             hheeeccccCceeEEEECCCCCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCC
Confidence            4567788999999999999999 99999999999998872                                  788899


Q ss_pred             CCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCC------C
Q psy7057          49 VNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHT------D  120 (557)
Q Consensus        49 ~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~------~  120 (557)
                      +.+|++++.|++|.||+..+.+.+.++.+|...|-.+.|.|-| +|++-+.|++|++|+ .+..+.+.+.++.      .
T Consensus       141 ~~~lvS~s~DnsViiwn~~tF~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T  220 (942)
T KOG0973|consen  141 DSLLVSVSLDNSVIIWNAKTFELLKVLRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTT  220 (942)
T ss_pred             ccEEEEecccceEEEEccccceeeeeeecccccccceEECCccCeeeeecCCceEEEEEcccceeeEeeccchhhCCCcc
Confidence            9999999999999999999999999999999999999999988 999999999999998 4445555554432      3


Q ss_pred             CEEEEEEeCCCeEEEE-----ECCCeEEEEECCCCeEEEEEeCCCCcEEEEEEc-------CC------------EEEEE
Q psy7057         121 CVRGLAVLNDTDFVSC-----SNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAH-------GD------------LITSG  176 (557)
Q Consensus       121 ~V~~l~~~~~~~lvs~-----s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~~-------~~------------~l~s~  176 (557)
                      .++.+.|+|+|.+++.     +.-.++.|.+-.+++.-..|-||.+++.++.|+       ..            .+++|
T Consensus       221 ~f~RlSWSPDG~~las~nA~n~~~~~~~IieR~tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~Avg  300 (942)
T KOG0973|consen  221 FFLRLSWSPDGHHLASPNAVNGGKSTIAIIERGTWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVG  300 (942)
T ss_pred             eeeecccCCCcCeecchhhccCCcceeEEEecCCceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEe
Confidence            5788999999996532     223568899988889899999999999999982       11            57899


Q ss_pred             eCCCeEEEEECCCCceE----eeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCC
Q psy7057         177 GEDQCVCVYQNKAQNSF----MIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPD  228 (557)
Q Consensus       177 s~Dg~I~iwd~~~~~~~----~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~  228 (557)
                      |.|++|.||.....+.+    ......|..++|+|+|. |++++.||+|.++.+...
T Consensus       301 SqDrSlSVW~T~~~RPl~vi~~lf~~SI~DmsWspdG~~LfacS~DGtV~~i~Fee~  357 (942)
T KOG0973|consen  301 SQDRSLSVWNTALPRPLFVIHNLFNKSIVDMSWSPDGFSLFACSLDGTVALIHFEEK  357 (942)
T ss_pred             cCCccEEEEecCCCCchhhhhhhhcCceeeeeEcCCCCeEEEEecCCeEEEEEcchH
Confidence            99999999997655333    33566899999999998 999999999999998764

>KOG1332|consensus

Probab=99.87  E-value=7e-21  Score=174.42  Aligned_cols=223  Identities=19%  Similarity=0.221  Sum_probs=177.9

Q ss_pred             CCCEEEEEECCCeEEEEECCCC---eEEEEEcccCCcEEEEEEcC--CC-EEEEEECCCeEEEEeCCCc---EEEEEeCC
Q psy7057          48 KVNTLLSASWDMTAKLWCLESQ---QCKLTIRQHEMAVWGVIQLA--NG-IIVTGCADKTIKLHSEEGE---FLKTLTGH  118 (557)
Q Consensus        48 ~~~~l~sgs~Dg~i~iwd~~~~---~~~~~l~~h~~~V~~l~~~~--~~-~l~sgs~dg~I~vwd~~~~---~~~~l~~h  118 (557)
                      -+.+|++|+.|++|+|+..++.   +.+.+|.+|.++|+.++|..  -| +|++++.||.|.||..++.   .......|
T Consensus        22 ygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g~w~k~~e~~~h  101 (299)
T KOG1332|consen   22 YGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEENGRWTKAYEHAAH  101 (299)
T ss_pred             hcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEecCCCchhhhhhhhhh
Confidence            4789999999999999998764   57889999999999999976  44 9999999999999984433   34556689


Q ss_pred             CCCEEEEEEeCCC--e-EEEEECCCeEEEEECCCC---eEEEEEeCCCCcEEEEEE-----cC-----------CEEEEE
Q psy7057         119 TDCVRGLAVLNDT--D-FVSCSNDASIRVWDSTTG---KCVHTMYGHPNFIYSVAA-----HG-----------DLITSG  176 (557)
Q Consensus       119 ~~~V~~l~~~~~~--~-lvs~s~Dg~I~vwd~~~~---~~~~~~~~h~~~V~~l~~-----~~-----------~~l~s~  176 (557)
                      ...|++++|.|..  . |+++|.||.|.|.+.++.   ........|.-.|.++++     .|           ..|++|
T Consensus       102 ~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSg  181 (299)
T KOG1332|consen  102 SASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSG  181 (299)
T ss_pred             cccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcCCCccccccCcccccceeecc
Confidence            9999999999984  3 669999999999988653   223344579999999998     22           469999


Q ss_pred             eCCCeEEEEECCCC-----ceEeeCCccEEEEEEcCCC---c--EEEEEcCCcEEEEecCCCC-cchhHHHhcccceeEE
Q psy7057         177 GEDQCVCVYQNKAQ-----NSFMIPAMSVWAVAILPNS---D--IVTGSSDGIVRVFSANPDR-QAEDAVQAQYAEEVKK  245 (557)
Q Consensus       177 s~Dg~I~iwd~~~~-----~~~~~~~~~v~~v~~~p~g---~--l~sg~~Dg~I~iwd~~~~~-~~~~~~~~~~~~~v~~  245 (557)
                      +.|..|+||+....     +++..|...|+.++|.|.-   +  |++++.||++.||..+... +-....+..+...+..
T Consensus       182 GcDn~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~~e~e~wk~tll~~f~~~~w~  261 (299)
T KOG1332|consen  182 GCDNLVKIWKFDSDSWKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKDEEYEPWKKTLLEEFPDVVWR  261 (299)
T ss_pred             CCccceeeeecCCcchhhhhhhhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEecCccCcccccccccCCcceEE
Confidence            99999999996552     6689999999999999974   2  9999999999999987442 2233445557777777


Q ss_pred             EeccCCCceeEEEEeCCCcEEEEecC
Q psy7057         246 LKSANEQEIGGVKVSDDGIVRVFSAN  271 (557)
Q Consensus       246 l~~~~~~~~~~vs~s~DG~IrvW~~~  271 (557)
                      +.+..... .++.++.|..|.+|.-+
T Consensus       262 vSWS~sGn-~LaVs~GdNkvtlwke~  286 (299)
T KOG1332|consen  262 VSWSLSGN-ILAVSGGDNKVTLWKEN  286 (299)
T ss_pred             EEEecccc-EEEEecCCcEEEEEEeC
Confidence            77765544 46667789999999743

>KOG0302|consensus

Probab=99.87  E-value=1e-20  Score=182.90  Aligned_cols=251  Identities=22%  Similarity=0.273  Sum_probs=188.5

Q ss_pred             EeccCcccEEEEEEcCCCc---EEEEECCCcEEEEcCCCCCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEE
Q psy7057           7 ALYGHSMDVRSLSVTPDGC---ILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVW   83 (557)
Q Consensus         7 ~l~gH~~~V~~l~~spdg~---l~sgs~Dg~V~iWd~~~~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~   83 (557)
                      ....|.+.|+.+..++-+.   .++=+..|.|.||++....        -+-+..+...- + ...+++.++.+|...=.
T Consensus       146 ~~i~h~g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l--------~~l~~~~~~~~-~-s~~~Pl~t~~ghk~EGy  215 (440)
T KOG0302|consen  146 KSIPHYGGINRVRVSRLGNEVLCASWSENGRVQVWDLAPHL--------NALSEPGLEVK-D-SEFRPLFTFNGHKGEGY  215 (440)
T ss_pred             cccccccccceeeecccCCcceeeeecccCcEEEEEchhhh--------hhhcCcccccc-c-cccCceEEecccCccce
Confidence            4456888888888888764   4456788999999986511        11111111111 1 34578999999999999


Q ss_pred             EEEEcC--CCEEEEEECCCeEEEEe-CCCcE---EEEEeCCCCCEEEEEEeCC--CeEEEEECCCeEEEEECCCC---eE
Q psy7057          84 GVIQLA--NGIIVTGCADKTIKLHS-EEGEF---LKTLTGHTDCVRGLAVLND--TDFVSCSNDASIRVWDSTTG---KC  152 (557)
Q Consensus        84 ~l~~~~--~~~l~sgs~dg~I~vwd-~~~~~---~~~l~~h~~~V~~l~~~~~--~~lvs~s~Dg~I~vwd~~~~---~~  152 (557)
                      .++|+|  .|.++||.--+.|++|. .++.-   ...+.+|+..|-.|+|+|.  +.|+|||.|++|+|||+|.+   .+
T Consensus       216 ~LdWSp~~~g~LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~  295 (440)
T KOG0302|consen  216 GLDWSPIKTGRLLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAA  295 (440)
T ss_pred             eeecccccccccccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccce
Confidence            999999  55899999999999998 33332   2346679999999999997  55889999999999999988   45


Q ss_pred             EEEEeCCCCcEEEEEEcC--CEEEEEeCCCeEEEEECCCC------ceEeeCCccEEEEEEcCCCc--EEEEEcCCcEEE
Q psy7057         153 VHTMYGHPNFIYSVAAHG--DLITSGGEDQCVCVYQNKAQ------NSFMIPAMSVWAVAILPNSD--IVTGSSDGIVRV  222 (557)
Q Consensus       153 ~~~~~~h~~~V~~l~~~~--~~l~s~s~Dg~I~iwd~~~~------~~~~~~~~~v~~v~~~p~g~--l~sg~~Dg~I~i  222 (557)
                      +.+ +.|.+-|..|+|+.  .+|++|+.||+++|||++..      ..+..|..+|++|.|+|...  |+++|.|..|.|
T Consensus       296 ~~~-kAh~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~Qiti  374 (440)
T KOG0302|consen  296 VST-KAHNSDVNVISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQITI  374 (440)
T ss_pred             eEe-eccCCceeeEEccCCcceeeecCCCceEEEEEhhhccCCCcceeEEeccCCeeEEEeccccCceEEeccCCCcEEE
Confidence            554 78999999999944  37999999999999998765      37888999999999999876  889999999999


Q ss_pred             EecCCCCcchhH----------------HHhcccceeEEEeccCCCceeEEEEeCCCcEEEE
Q psy7057         223 FSANPDRQAEDA----------------VQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVF  268 (557)
Q Consensus       223 wd~~~~~~~~~~----------------~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW  268 (557)
                      ||+.-..-....                ........+..+.+++..+-.+|+.+.||.-.+.
T Consensus       375 WDlsvE~D~ee~~~~a~~~L~dlPpQLLFVHqGQke~KevhWH~QiPG~lvsTa~dGfnVfk  436 (440)
T KOG0302|consen  375 WDLSVEADEEEIDQEAAEGLQDLPPQLLFVHQGQKEVKEVHWHRQIPGLLVSTAIDGFNVFK  436 (440)
T ss_pred             EEeeccCChhhhccccccchhcCCceeEEEecchhHhhhheeccCCCCeEEEecccceeEEE
Confidence            998654321100                0111223455666777777788999999954333

>KOG0639|consensus

Probab=99.85  E-value=1.5e-20  Score=187.22  Aligned_cols=256  Identities=15%  Similarity=0.232  Sum_probs=202.7

Q ss_pred             cCcccEEEEEEcCCCcEEEEECCCcEEEEcCCC---------------------CCCCCCCCEEEEEECCCeEEEEECCC
Q psy7057          10 GHSMDVRSLSVTPDGCILSASRDKSAKLWKPND---------------------LSPGAKVNTLLSASWDMTAKLWCLES   68 (557)
Q Consensus        10 gH~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~---------------------~~~~~~~~~l~sgs~Dg~i~iwd~~~   68 (557)
                      .|..-|.++.+|...+-+-.+..|.|+|||+..                     +...++++.|++|+.-.++.|||+..
T Consensus       417 ~HGEvVcAvtIS~~trhVyTgGkgcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGeastlsiWDLAa  496 (705)
T KOG0639|consen  417 AHGEVVCAVTISNPTRHVYTGGKGCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWDLAA  496 (705)
T ss_pred             ccCcEEEEEEecCCcceeEecCCCeEEEeeccCCCCCCccccccccCcccceeeeEecCCCceEEeccccceeeeeeccC
Confidence            588889999999888844445568999999876                     44567899999999999999999987


Q ss_pred             CeEE--EEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeC-CCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEE
Q psy7057          69 QQCK--LTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSE-EGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIR  143 (557)
Q Consensus        69 ~~~~--~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~-~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~  143 (557)
                      ..+.  ..+..-.....+++.+||. ..++++.||.|.|||+ +...++.|.+|.+.+.||.++++|. |.+|+-|.+||
T Consensus       497 pTprikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~~VrqfqGhtDGascIdis~dGtklWTGGlDntvR  576 (705)
T KOG0639|consen  497 PTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISKDGTKLWTGGLDNTVR  576 (705)
T ss_pred             CCcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccceeeecccCCCCCceeEEecCCCceeecCCCcccee
Confidence            6543  3333334566778899988 8889999999999994 5567899999999999999999976 88999999999


Q ss_pred             EEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC--ceEeeCCccEEEEEEcCCCc-EEEEEcCC
Q psy7057         144 VWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ--NSFMIPAMSVWAVAILPNSD-IVTGSSDG  218 (557)
Q Consensus       144 vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~--~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg  218 (557)
                      -||+++++.+.... ....|.++..  .+++|+.|-+.+.+.+-.....  ..+..|++.|.++.|.+.|+ +++.+.|+
T Consensus       577 cWDlregrqlqqhd-F~SQIfSLg~cP~~dWlavGMens~vevlh~skp~kyqlhlheScVLSlKFa~cGkwfvStGkDn  655 (705)
T KOG0639|consen  577 CWDLREGRQLQQHD-FSSQIFSLGYCPTGDWLAVGMENSNVEVLHTSKPEKYQLHLHESCVLSLKFAYCGKWFVSTGKDN  655 (705)
T ss_pred             ehhhhhhhhhhhhh-hhhhheecccCCCccceeeecccCcEEEEecCCccceeecccccEEEEEEecccCceeeecCchh
Confidence            99999987765433 4678888877  7889999999999999886655  56777889999999999999 99999999


Q ss_pred             cEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEec
Q psy7057         219 IVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSA  270 (557)
Q Consensus       219 ~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~  270 (557)
                      .+..|...-+..+..  . .-..+|.+..... +..++||||.|....||.+
T Consensus       656 lLnawrtPyGasiFq--s-kE~SsVlsCDIS~-ddkyIVTGSGdkkATVYeV  703 (705)
T KOG0639|consen  656 LLNAWRTPYGASIFQ--S-KESSSVLSCDISF-DDKYIVTGSGDKKATVYEV  703 (705)
T ss_pred             hhhhccCccccceee--c-cccCcceeeeecc-CceEEEecCCCcceEEEEE
Confidence            999998765543211  1 1122343333333 3446899999998888864

>KOG4283|consensus

Probab=99.85  E-value=5.2e-20  Score=172.70  Aligned_cols=258  Identities=20%  Similarity=0.263  Sum_probs=181.7

Q ss_pred             ccCcccEEEEEEcCC-Cc-EEEEECCCcEEEEcCCC--------------------------------CCCCCCCCEEEE
Q psy7057           9 YGHSMDVRSLSVTPD-GC-ILSASRDKSAKLWKPND--------------------------------LSPGAKVNTLLS   54 (557)
Q Consensus         9 ~gH~~~V~~l~~spd-g~-l~sgs~Dg~V~iWd~~~--------------------------------~~~~~~~~~l~s   54 (557)
                      +-|.+.|+++.+.+. |+ +++|+.||.|.+||++.                                .-+.-+...+.+
T Consensus        40 r~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFts  119 (397)
T KOG4283|consen   40 RPHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFTS  119 (397)
T ss_pred             ccCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceeec
Confidence            459999999999884 66 88999999999999987                                011123567889


Q ss_pred             EECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCC---C-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeC
Q psy7057          55 ASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLAN---G-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLN  129 (557)
Q Consensus        55 gs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~---~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~  129 (557)
                      +|.|.++++||..+.+....|. -++.|.+-+++|-   . ++++|..|-.|++.| .+|.+.++|.+|.+.|.++.|+|
T Consensus       120 sSFDhtlKVWDtnTlQ~a~~F~-me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~Wsp  198 (397)
T KOG4283|consen  120 SSFDHTLKVWDTNTLQEAVDFK-MEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVLAVEWSP  198 (397)
T ss_pred             ccccceEEEeecccceeeEEee-cCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccCceEEEEecc
Confidence            9999999999999988777776 5678888888882   2 889999999999999 68899999999999999999999


Q ss_pred             CCe--EEEEECCCeEEEEECCCC-eEEEEEe--------------CCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC
Q psy7057         130 DTD--FVSCSNDASIRVWDSTTG-KCVHTMY--------------GHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ  190 (557)
Q Consensus       130 ~~~--lvs~s~Dg~I~vwd~~~~-~~~~~~~--------------~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~  190 (557)
                      ...  |++||.||.||+||++.. .|...+.              .|.+.|..++|  ++.++++++.|..+++|+..+.
T Consensus       199 ~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn~~~G  278 (397)
T KOG4283|consen  199 SSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRVWNMESG  278 (397)
T ss_pred             CceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhhhhccCccceEEeecccC
Confidence            977  559999999999999854 3444443              45678899999  7889999999999999996544


Q ss_pred             -ceEee-----CCc---cEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEe
Q psy7057         191 -NSFMI-----PAM---SVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVS  260 (557)
Q Consensus       191 -~~~~~-----~~~---~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s  260 (557)
                       .++..     +..   .-..+. +-+.. ++---.++.+.++++-.+.......  .|...+.+..+ ..+-..+.+++
T Consensus       279 ~ntl~~~g~~~~n~~~~~~~~~~-~~~s~vfv~~p~~~~lall~~~sgs~ir~l~--~h~k~i~c~~~-~~~fq~~~tg~  354 (397)
T KOG4283|consen  279 RNTLREFGPIIHNQTTSFAVHIQ-SMDSDVFVLFPNDGSLALLNLLEGSFVRRLS--THLKRINCAAY-RPDFEQCFTGD  354 (397)
T ss_pred             cccccccccccccccccceEEEe-ecccceEEEEecCCeEEEEEccCceEEEeee--cccceeeEEee-cCchhhhhccc
Confidence             11111     110   000011 11111 2223334555555544443332211  12122222222 22223468899


Q ss_pred             CCCcEEEEecC
Q psy7057         261 DDGIVRVFSAN  271 (557)
Q Consensus       261 ~DG~IrvW~~~  271 (557)
                      .|+.|..|...
T Consensus       355 ~d~ni~~w~p~  365 (397)
T KOG4283|consen  355 MNGNIYMWSPA  365 (397)
T ss_pred             cCCcccccccc
Confidence            99999999864

>KOG0270|consensus

Probab=99.85  E-value=7.2e-20  Score=180.51  Aligned_cols=231  Identities=16%  Similarity=0.168  Sum_probs=181.6

Q ss_pred             CCCCEEEEEECCCeEEEEECCCCe---EEEE------------------EcccCCcEEEEEEcCC--CEEEEEECCCeEE
Q psy7057          47 AKVNTLLSASWDMTAKLWCLESQQ---CKLT------------------IRQHEMAVWGVIQLAN--GIIVTGCADKTIK  103 (557)
Q Consensus        47 ~~~~~l~sgs~Dg~i~iwd~~~~~---~~~~------------------l~~h~~~V~~l~~~~~--~~l~sgs~dg~I~  103 (557)
                      ..+++++.|+.|..|.|||+.-..   +..+                  -.+|+..|.+++|+..  +.|+|||.|.+|+
T Consensus       190 ~~gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~  269 (463)
T KOG0270|consen  190 GAGNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFRNVLASGSADKTVK  269 (463)
T ss_pred             CCcceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhccccceeEEecCCCceEE
Confidence            457899999999999999975321   1111                  2368889999988874  4999999999999


Q ss_pred             EEe-CCCcEEEEEeCCCCCEEEEEEeCC-Ce-EEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE---cCCEEEEEe
Q psy7057         104 LHS-EEGEFLKTLTGHTDCVRGLAVLND-TD-FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA---HGDLITSGG  177 (557)
Q Consensus       104 vwd-~~~~~~~~l~~h~~~V~~l~~~~~-~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~---~~~~l~s~s  177 (557)
                      +|| .++++..++..|...|.++.|+|. .. +++||.|+++++.|.|...+....-.-.+.|-.++|   ....+++++
T Consensus       270 lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk~~g~VEkv~w~~~se~~f~~~t  349 (463)
T KOG0270|consen  270 LWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWKFDGEVEKVAWDPHSENSFFVST  349 (463)
T ss_pred             EEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceEEeccceEEEEecCCCceeEEEec
Confidence            999 678999999999999999999987 33 779999999999999854333222234678889999   345788999


Q ss_pred             CCCeEEEEECCCC----ceEeeCCccEEEEEEcCCCc--EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCC
Q psy7057         178 EDQCVCVYQNKAQ----NSFMIPAMSVWAVAILPNSD--IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANE  251 (557)
Q Consensus       178 ~Dg~I~iwd~~~~----~~~~~~~~~v~~v~~~p~g~--l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~  251 (557)
                      .||+++-+|.|..    .++..|..+|.++++++...  +++++.|+.|++|++..........+.--.+...+....+.
T Consensus       350 ddG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~~~~v~~~~~~~~rl~c~~~~~~  429 (463)
T KOG0270|consen  350 DDGTVYYFDIRNPGKPVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDSPKSVKEHSFKLGRLHCFALDPD  429 (463)
T ss_pred             CCceEEeeecCCCCCceeEEEeccCCcceEEecCCCCcceeeccccceEEEEeecCCCCcccccccccccceeecccCCC
Confidence            9999999998765    67889999999999998765  88999999999999986655433333222333455556666


Q ss_pred             CceeEEEEeCCCcEEEEecCCChhhH
Q psy7057         252 QEIGGVKVSDDGIVRVFSANPDRQAE  277 (557)
Q Consensus       252 ~~~~~vs~s~DG~IrvW~~~~~~~~~  277 (557)
                      ....++.|+..+.+|||++.......
T Consensus       430 ~a~~la~GG~k~~~~vwd~~~~~~V~  455 (463)
T KOG0270|consen  430 VAFTLAFGGEKAVLRVWDIFTNSPVR  455 (463)
T ss_pred             cceEEEecCccceEEEeecccChhHH
Confidence            67778889999999999998876543

>KOG1407|consensus

Probab=99.85  E-value=1.5e-19  Score=167.26  Aligned_cols=210  Identities=14%  Similarity=0.176  Sum_probs=179.7

Q ss_pred             EeccCcccEEEEEEcCCCc--EEEEECCCcEEEEcCCC---------------CCCCCCCCEEEEEECCCeEEEEECCCC
Q psy7057           7 ALYGHSMDVRSLSVTPDGC--ILSASRDKSAKLWKPND---------------LSPGAKVNTLLSASWDMTAKLWCLESQ   69 (557)
Q Consensus         7 ~l~gH~~~V~~l~~spdg~--l~sgs~Dg~V~iWd~~~---------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~   69 (557)
                      ..+||.+.|-.++|+|...  +++++.|.+|++||...               +.++|++.+++.++.|..|...|.++.
T Consensus        59 ~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd~r~~k~~~~i~~~~eni~i~wsp~g~~~~~~~kdD~it~id~r~~  138 (313)
T KOG1407|consen   59 VYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWDIRSGKCTARIETKGENINITWSPDGEYIAVGNKDDRITFIDARTY  138 (313)
T ss_pred             cccCCCcchhhheeCCCCCcceEEecCCceEEEEEeccCcEEEEeeccCcceEEEEcCCCCEEEEecCcccEEEEEeccc
Confidence            4578999999999998754  88999999999999886               788899999999999999999999887


Q ss_pred             eEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEEEEE
Q psy7057          70 QCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVWD  146 (557)
Q Consensus        70 ~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd  146 (557)
                      +.+...+ ....+.-++|+.++ +++.....|+|.|.. .+-+++.+++.|.....||.|+|+|+ |++|+.|..+.+||
T Consensus       139 ~~~~~~~-~~~e~ne~~w~~~nd~Fflt~GlG~v~ILsypsLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD  217 (313)
T KOG1407|consen  139 KIVNEEQ-FKFEVNEISWNNSNDLFFLTNGLGCVEILSYPSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWD  217 (313)
T ss_pred             ceeehhc-ccceeeeeeecCCCCEEEEecCCceEEEEeccccccccccccCCcceEEEEECCCCceEeeccccceeeccC
Confidence            7665554 44566677777665 666666779999977 67788999999999999999999998 78999999999999


Q ss_pred             CCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCCceEe--eCCccEEEEEEcCCCc-EEEEEcC
Q psy7057         147 STTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQNSFM--IPAMSVWAVAILPNSD-IVTGSSD  217 (557)
Q Consensus       147 ~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~~~~~--~~~~~v~~v~~~p~g~-l~sg~~D  217 (557)
                      +...-|++.+..+.-+|+.++|  +|++|+++|+|..|-|=+..++.++.  .+.++...|+|+|... |+-++.|
T Consensus       218 ~~ELiC~R~isRldwpVRTlSFS~dg~~lASaSEDh~IDIA~vetGd~~~eI~~~~~t~tVAWHPk~~LLAyA~dd  293 (313)
T KOG1407|consen  218 VDELICERCISRLDWPVRTLSFSHDGRMLASASEDHFIDIAEVETGDRVWEIPCEGPTFTVAWHPKRPLLAYACDD  293 (313)
T ss_pred             hhHhhhheeeccccCceEEEEeccCcceeeccCccceEEeEecccCCeEEEeeccCCceeEEecCCCceeeEEecC
Confidence            9999999999999999999999  89999999999999999888773332  3567889999999988 5555543

>KOG0264|consensus

Probab=99.85  E-value=2.9e-20  Score=184.00  Aligned_cols=203  Identities=21%  Similarity=0.245  Sum_probs=161.5

Q ss_pred             EEeccCcccEEEEEEcCCC--cEEEEECCCcEEEEcCCCCCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEE
Q psy7057           6 TALYGHSMDVRSLSVTPDG--CILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVW   83 (557)
Q Consensus         6 ~~l~gH~~~V~~l~~spdg--~l~sgs~Dg~V~iWd~~~~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~   83 (557)
                      -+|.||.+.=.+|+|++..  .|++++.|++|++||++.....           +        ..-.+...+.+|+..|.
T Consensus       171 l~L~gH~~eg~glsWn~~~~g~Lls~~~d~~i~lwdi~~~~~~-----------~--------~~~~p~~~~~~h~~~Ve  231 (422)
T KOG0264|consen  171 LRLKGHEKEGYGLSWNRQQEGTLLSGSDDHTICLWDINAESKE-----------D--------KVVDPKTIFSGHEDVVE  231 (422)
T ss_pred             eEEEeecccccccccccccceeEeeccCCCcEEEEeccccccC-----------C--------ccccceEEeecCCccee
Confidence            4677887767777787753  3677777777777766532111           0        11134567889999999


Q ss_pred             EEEEcCCC--EEEEEECCCeEEEEeC---CCcEEEEEeCCCCCEEEEEEeCCCe--EEEEECCCeEEEEECCCC-eEEEE
Q psy7057          84 GVIQLANG--IIVTGCADKTIKLHSE---EGEFLKTLTGHTDCVRGLAVLNDTD--FVSCSNDASIRVWDSTTG-KCVHT  155 (557)
Q Consensus        84 ~l~~~~~~--~l~sgs~dg~I~vwd~---~~~~~~~l~~h~~~V~~l~~~~~~~--lvs~s~Dg~I~vwd~~~~-~~~~~  155 (557)
                      .++|++..  ++++.+.|+.+.|||.   +.++.+...+|...|.|++|+|-+.  |++||.|++|++||+|+. +++.+
T Consensus       232 DV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~  311 (422)
T KOG0264|consen  232 DVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHT  311 (422)
T ss_pred             hhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCcee
Confidence            99999955  9999999999999993   3456677789999999999998754  679999999999999974 57899


Q ss_pred             EeCCCCcEEEEEEc---CCEEEEEeCCCeEEEEECCCC---c--------------eEeeCCccEEEEEEcCCCc--EEE
Q psy7057         156 MYGHPNFIYSVAAH---GDLITSGGEDQCVCVYQNKAQ---N--------------SFMIPAMSVWAVAILPNSD--IVT  213 (557)
Q Consensus       156 ~~~h~~~V~~l~~~---~~~l~s~s~Dg~I~iwd~~~~---~--------------~~~~~~~~v~~v~~~p~g~--l~s  213 (557)
                      +.+|...|.+|.|+   ...|++++.|+.+.+||+...   +              .-.+|...|..+.|+|+..  |++
T Consensus       312 ~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~S  391 (422)
T KOG0264|consen  312 FEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIAS  391 (422)
T ss_pred             ccCCCcceEEEEeCCCCCceeEecccCCcEEEEeccccccccChhhhccCCcceeEEecCcccccccccCCCCCCeEEEE
Confidence            99999999999993   458999999999999995432   1              1235778899999999987  889


Q ss_pred             EEcCCcEEEEecCC
Q psy7057         214 GSSDGIVRVFSANP  227 (557)
Q Consensus       214 g~~Dg~I~iwd~~~  227 (557)
                      .++|+.+.||+...
T Consensus       392 vaeDN~LqIW~~s~  405 (422)
T KOG0264|consen  392 VAEDNILQIWQMAE  405 (422)
T ss_pred             ecCCceEEEeeccc
Confidence            99999999999763

>KOG2445|consensus

Probab=99.85  E-value=1.6e-19  Score=170.52  Aligned_cols=220  Identities=16%  Similarity=0.218  Sum_probs=170.4

Q ss_pred             EeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------------CCCCCCCCEEEEEECCCeEEE
Q psy7057           7 ALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------------LSPGAKVNTLLSASWDMTAKL   63 (557)
Q Consensus         7 ~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------------~~~~~~~~~l~sgs~Dg~i~i   63 (557)
                      .-.+|.+-|.|+.|.+-|+ ++|||.|++|+|||..+                      .+...-|+.++++|.|++++|
T Consensus         8 i~s~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~i   87 (361)
T KOG2445|consen    8 IDSGHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSI   87 (361)
T ss_pred             cccCCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceee
Confidence            3467999999999999998 99999999999999654                      344456899999999999999


Q ss_pred             EECC---------CCeEEEEEcccCCcEEEEEEcCCC---EEEEEECCCeEEEEe-CCC------cEEEEEe-------C
Q psy7057          64 WCLE---------SQQCKLTIRQHEMAVWGVIQLANG---IIVTGCADKTIKLHS-EEG------EFLKTLT-------G  117 (557)
Q Consensus        64 wd~~---------~~~~~~~l~~h~~~V~~l~~~~~~---~l~sgs~dg~I~vwd-~~~------~~~~~l~-------~  117 (557)
                      |.-.         ......++......|+.+.|.|..   .+++++.||++|||+ .+.      .....+.       .
T Consensus        88 WEE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~  167 (361)
T KOG2445|consen   88 WEEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGK  167 (361)
T ss_pred             eeecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCccc
Confidence            9752         123456677788999999999954   899999999999998 211      1112222       4


Q ss_pred             CCCCEEEEEEeCC----CeEEEEECC-----CeEEEEECCC----CeEEEEEeCCCCcEEEEEEc---CC---EEEEEeC
Q psy7057         118 HTDCVRGLAVLND----TDFVSCSND-----ASIRVWDSTT----GKCVHTMYGHPNFIYSVAAH---GD---LITSGGE  178 (557)
Q Consensus       118 h~~~V~~l~~~~~----~~lvs~s~D-----g~I~vwd~~~----~~~~~~~~~h~~~V~~l~~~---~~---~l~s~s~  178 (557)
                      +..+..|+.|+|.    ..|+.|+.+     +.++||....    ...+.++.+|+.+|++|+|.   |+   .|++++.
T Consensus       168 ~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA~k  247 (361)
T KOG2445|consen  168 NKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNIGRSYHLLAVATK  247 (361)
T ss_pred             ccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeeccccCCceeeEEEeec
Confidence            6677889999876    225555554     3788886543    23566788999999999993   32   6899999


Q ss_pred             CCeEEEEECCCC-----------------------ceEeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCC
Q psy7057         179 DQCVCVYQNKAQ-----------------------NSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANP  227 (557)
Q Consensus       179 Dg~I~iwd~~~~-----------------------~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~  227 (557)
                      || |+||.++..                       ..+..|.+.||.+.|.-.|. |.+.|.||+||+|..+-
T Consensus       248 Dg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtGtiLsStGdDG~VRLWkany  319 (361)
T KOG2445|consen  248 DG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTGTILSSTGDDGCVRLWKANY  319 (361)
T ss_pred             Cc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeeeeEEeecCCCceeeehhhhh
Confidence            99 999986521                       13456888999999999998 77899999999997653

>KOG0268|consensus

Probab=99.85  E-value=1.3e-20  Score=181.31  Aligned_cols=221  Identities=19%  Similarity=0.259  Sum_probs=182.8

Q ss_pred             EEEEeccCcccEEEEEEcCCCcEEEEECCCcEEEEcCCC--------------CCCCCCCCEEEEEECCCeEEEEECCCC
Q psy7057           4 LSTALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPND--------------LSPGAKVNTLLSASWDMTAKLWCLESQ   69 (557)
Q Consensus         4 l~~~l~gH~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~--------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~   69 (557)
                      +..+|++|.+.|+.|++.. +.+++++.|.+|+.|.+..              +......+.++||+.+  |.|||....
T Consensus       101 ~~~~f~AH~G~V~Gi~v~~-~~~~tvgdDKtvK~wk~~~~p~~tilg~s~~~gIdh~~~~~~FaTcGe~--i~IWD~~R~  177 (433)
T KOG0268|consen  101 CIRTFKAHEGLVRGICVTQ-TSFFTVGDDKTVKQWKIDGPPLHTILGKSVYLGIDHHRKNSVFATCGEQ--IDIWDEQRD  177 (433)
T ss_pred             hhheeecccCceeeEEecc-cceEEecCCcceeeeeccCCcceeeeccccccccccccccccccccCce--eeecccccC
Confidence            4678999999999999987 5699999999999998554              4444456677777754  899999988


Q ss_pred             eEEEEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEEEE
Q psy7057          70 QCKLTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVW  145 (557)
Q Consensus        70 ~~~~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vw  145 (557)
                      .++..+.-..+.|.++.|+|-.  .|+++..|+.|.++| ..+.+++.+. -...-..|+|+|+.. |++++.|..+..+
T Consensus       178 ~Pv~smswG~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KVi-~~mRTN~IswnPeafnF~~a~ED~nlY~~  256 (433)
T KOG0268|consen  178 NPVSSMSWGADSISSVKFNPVETSILASCASDRSIVLYDLRQASPLKKVI-LTMRTNTICWNPEAFNFVAANEDHNLYTY  256 (433)
T ss_pred             CccceeecCCCceeEEecCCCcchheeeeccCCceEEEecccCCccceee-eeccccceecCccccceeeccccccceeh
Confidence            9999998889999999999955  888898999999999 5566655543 234467899999755 8899999999999


Q ss_pred             ECCCC-eEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCCceE-eeC---CccEEEEEEcCCCc-EEEEEcC
Q psy7057         146 DSTTG-KCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQNSF-MIP---AMSVWAVAILPNSD-IVTGSSD  217 (557)
Q Consensus       146 d~~~~-~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~~~~-~~~---~~~v~~v~~~p~g~-l~sg~~D  217 (557)
                      |++.. .++....+|.+.|.++.|  .|+-+++||-|.+||||..+....- ..|   -..|.||.|+.|.+ +++||.|
T Consensus       257 DmR~l~~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDksIRIf~~~~~~SRdiYhtkRMq~V~~Vk~S~Dskyi~SGSdd  336 (433)
T KOG0268|consen  257 DMRNLSRPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVNHGHSRDIYHTKRMQHVFCVKYSMDSKYIISGSDD  336 (433)
T ss_pred             hhhhhcccchhhcccceeEEEeccCCCcchhccccccceEEEeecCCCcchhhhhHhhhheeeEEEEeccccEEEecCCC
Confidence            99864 578888999999999999  6778999999999999997665211 112   24699999999999 8899999


Q ss_pred             CcEEEEecCCC
Q psy7057         218 GIVRVFSANPD  228 (557)
Q Consensus       218 g~I~iwd~~~~  228 (557)
                      +.||+|.....
T Consensus       337 ~nvRlWka~As  347 (433)
T KOG0268|consen  337 GNVRLWKAKAS  347 (433)
T ss_pred             cceeeeecchh
Confidence            99999987654

>KOG1063|consensus

Probab=99.85  E-value=2.5e-19  Score=184.98  Aligned_cols=267  Identities=22%  Similarity=0.292  Sum_probs=214.8

Q ss_pred             EEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC-----------------------CCCCCCCCEEEEEECCCeE
Q psy7057           6 TALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND-----------------------LSPGAKVNTLLSASWDMTA   61 (557)
Q Consensus         6 ~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~-----------------------~~~~~~~~~l~sgs~Dg~i   61 (557)
                      ..+.||.+.|.++.|+|.+. |+++|.|.++.+|...+                       .-++++++.+++-+..|..
T Consensus       261 all~GHeDWV~sv~W~p~~~~LLSASaDksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~n~~~ii~~g~~Gg~  340 (764)
T KOG1063|consen  261 ALLMGHEDWVYSVWWHPEGLDLLSASADKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSPNSNVIIAHGRTGGF  340 (764)
T ss_pred             hhhcCcccceEEEEEccchhhheecccCcceEEEecCCccceEEEEEEeecccccccceeeEEEcCCCCEEEEecccCcE
Confidence            34679999999999999996 99999999999998776                       3456778999999999999


Q ss_pred             EEEECCCC---eEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCc------------------E--------
Q psy7057          62 KLWCLESQ---QCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGE------------------F--------  111 (557)
Q Consensus        62 ~iwd~~~~---~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~------------------~--------  111 (557)
                      ++|..+..   .....+.||...|..++|.|.| +|++.|.|.+-|+|-.-|+                  +        
T Consensus       341 hlWkt~d~~~w~~~~~iSGH~~~V~dv~W~psGeflLsvs~DQTTRlFa~wg~q~~wHEiaRPQiHGyDl~c~~~vn~~~  420 (764)
T KOG1063|consen  341 HLWKTKDKTFWTQEPVISGHVDGVKDVDWDPSGEFLLSVSLDQTTRLFARWGRQQEWHEIARPQIHGYDLTCLSFVNEDL  420 (764)
T ss_pred             EEEeccCccceeeccccccccccceeeeecCCCCEEEEeccccceeeecccccccceeeecccccccccceeeehccCCc
Confidence            99983332   3445678999999999999988 9999999988888531100                  0        


Q ss_pred             --------------------------------------------------------------------------------
Q psy7057         112 --------------------------------------------------------------------------------  111 (557)
Q Consensus       112 --------------------------------------------------------------------------------  111 (557)
                                                                                                      
T Consensus       421 ~FVSgAdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~~~p~~L  500 (764)
T KOG1063|consen  421 QFVSGADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAETPLAAAPCEL  500 (764)
T ss_pred             eeeecccceeeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCcccccccccccceeeecccccCchhc
Confidence                                                                                            


Q ss_pred             -----------------EEEEeCCCCCEEEEEEeCCCeEE-EEECC-----CeEEEEECCCCeEEEEEeCCCCcEEEEEE
Q psy7057         112 -----------------LKTLTGHTDCVRGLAVLNDTDFV-SCSND-----ASIRVWDSTTGKCVHTMYGHPNFIYSVAA  168 (557)
Q Consensus       112 -----------------~~~l~~h~~~V~~l~~~~~~~lv-s~s~D-----g~I~vwd~~~~~~~~~~~~h~~~V~~l~~  168 (557)
                                       ++++.||...|.+++.+|++.|+ |++..     ..|++|+..+...+..+.+|+-.|+.|+|
T Consensus       501 ~ePP~EdqLq~~tLwPEv~KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~HsLTVT~l~F  580 (764)
T KOG1063|consen  501 TEPPTEDQLQQNTLWPEVHKLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQELEGHSLTVTRLAF  580 (764)
T ss_pred             cCCChHHHHHHhccchhhHHhccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhheecccceEEEEEEE
Confidence                             00156888999999999998855 55543     35999999999999999999999999999


Q ss_pred             --cCCEEEEEeCCCeEEEEECCCC-------ceEeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCC--CcchhHHH
Q psy7057         169 --HGDLITSGGEDQCVCVYQNKAQ-------NSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPD--RQAEDAVQ  236 (557)
Q Consensus       169 --~~~~l~s~s~Dg~I~iwd~~~~-------~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~--~~~~~~~~  236 (557)
                        ++++|++.|.|+++.+|.....       ..++.|..-||++.|+|++. |+|+|.|.+|++|.....  +.......
T Consensus       581 Spdg~~LLsvsRDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~~~~~d~~i~~~a~  660 (764)
T KOG1063|consen  581 SPDGRYLLSVSRDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEEPDLRDKYISRFAC  660 (764)
T ss_pred             CCCCcEEEEeecCceEEeeeeecccchhhhhccccccceEEEEcccCcccceeEEecCCceEEEEeccCchhhhhhhhch
Confidence              8889999999999999984322       23667888999999999999 999999999999998877  44444455


Q ss_pred             hcccceeEEEeccCCCce----eEEEEeCCCcEEEEecCC
Q psy7057         237 AQYAEEVKKLKSANEQEI----GGVKVSDDGIVRVFSANP  272 (557)
Q Consensus       237 ~~~~~~v~~l~~~~~~~~----~~vs~s~DG~IrvW~~~~  272 (557)
                      ..+...++.+.+.+...+    .++.|-..|.|.+|+...
T Consensus       661 ~~~~~aVTAv~~~~~~~~e~~~~vavGle~GeI~l~~~~~  700 (764)
T KOG1063|consen  661 LKFSLAVTAVAYLPVDHNEKGDVVAVGLEKGEIVLWRRKR  700 (764)
T ss_pred             hccCCceeeEEeeccccccccceEEEEecccEEEEEeccc
Confidence            567777888776554333    456677999999998663

>KOG0288|consensus

Probab=99.84  E-value=5.4e-20  Score=179.74  Aligned_cols=219  Identities=19%  Similarity=0.296  Sum_probs=177.4

Q ss_pred             EEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEE
Q psy7057           3 KLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWC   65 (557)
Q Consensus         3 kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd   65 (557)
                      .+..+|.|-.+.|+++.|.++++ +++++.|+.+++|++..                ..+......+++|+.|.+|++||
T Consensus       210 ~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wnvd~~r~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WD  289 (459)
T KOG0288|consen  210 ELISTLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWNVDSLRLRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWD  289 (459)
T ss_pred             hhhhhhhccCCCcceeeecCCCceEEeecCCCceeeeeccchhhhhhhcccccceeeehhhccccceeeccccchhhhhh
Confidence            45678888899999999999998 89999999999999987                22333334599999999999999


Q ss_pred             CCCCeEEEEEcccCCcEEEEEEcCCCEEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEE
Q psy7057          66 LESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIR  143 (557)
Q Consensus        66 ~~~~~~~~~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~  143 (557)
                      +....|..++.. ...+..|+.. ...+++|-.|++|++|| ....+......+. .|+++..++++. +++++.|.++.
T Consensus       290 l~k~~C~kt~l~-~S~cnDI~~~-~~~~~SgH~DkkvRfwD~Rs~~~~~sv~~gg-~vtSl~ls~~g~~lLsssRDdtl~  366 (459)
T KOG0288|consen  290 LQKAYCSKTVLP-GSQCNDIVCS-ISDVISGHFDKKVRFWDIRSADKTRSVPLGG-RVTSLDLSMDGLELLSSSRDDTLK  366 (459)
T ss_pred             hhhhheeccccc-cccccceEec-ceeeeecccccceEEEeccCCceeeEeecCc-ceeeEeeccCCeEEeeecCCCcee
Confidence            999888877653 3344455544 34789999999999999 6777777777665 899999999976 88999999999


Q ss_pred             EEECCCCeEEEEEeCC----CCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC---ceEeeCCc--cEEEEEEcCCCc-E
Q psy7057         144 VWDSTTGKCVHTMYGH----PNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ---NSFMIPAM--SVWAVAILPNSD-I  211 (557)
Q Consensus       144 vwd~~~~~~~~~~~~h----~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~--~v~~v~~~p~g~-l  211 (557)
                      +.|+++.+..+.+...    ..-.+.+.|  ++.++++||.||.|+||+..+.   ..+.....  .|.+++|+|.|. +
T Consensus       367 viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~L  446 (459)
T KOG0288|consen  367 VIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSGSGL  446 (459)
T ss_pred             eeecccccEEEEeeccccccccccceeEECCCCceeeeccCCCcEEEEEccCceEEEEeccCCCCcceEEEEEcCCCchh
Confidence            9999998888877532    223556666  7789999999999999996655   34444433  599999999999 9


Q ss_pred             EEEEcCCcEEEEe
Q psy7057         212 VTGSSDGIVRVFS  224 (557)
Q Consensus       212 ~sg~~Dg~I~iwd  224 (557)
                      ++++.++.+++|.
T Consensus       447 lsadk~~~v~lW~  459 (459)
T KOG0288|consen  447 LSADKQKAVTLWT  459 (459)
T ss_pred             hcccCCcceEecC
Confidence            9999999999994

>KOG2048|consensus

Probab=99.84  E-value=1e-18  Score=180.24  Aligned_cols=258  Identities=19%  Similarity=0.302  Sum_probs=210.4

Q ss_pred             CcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC------------------CCCCCCCCEEEEEECCCeEEEEECCCCeE
Q psy7057          11 HSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND------------------LSPGAKVNTLLSASWDMTAKLWCLESQQC   71 (557)
Q Consensus        11 H~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~------------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~   71 (557)
                      -...|.||||+.+.. ||.+-.||.|.||++..                  ++|. .+..|++.+.+|.|.-||+.++++
T Consensus        24 ~Ps~I~slA~s~kS~~lAvsRt~g~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~-e~~RLFS~g~sg~i~EwDl~~lk~  102 (691)
T KOG2048|consen   24 KPSEIVSLAYSHKSNQLAVSRTDGNIEIWNLSNNWFLEPVIHGPEDRSIESLAWA-EGGRLFSSGLSGSITEWDLHTLKQ  102 (691)
T ss_pred             eccceEEEEEeccCCceeeeccCCcEEEEccCCCceeeEEEecCCCCceeeEEEc-cCCeEEeecCCceEEEEecccCce
Confidence            457899999999876 99999999999999987                  5555 578899999999999999999999


Q ss_pred             EEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcEE---EEEeCCCCCEEEEEEeCCCe-EEEEECCCeEEEEE
Q psy7057          72 KLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFL---KTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVWD  146 (557)
Q Consensus        72 ~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~---~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd  146 (557)
                      ...+....+.||+++.+|.+ .++.||.||.+..++.....+   ..|...++.|.+++|+|++. +++|+.||.|++||
T Consensus       103 ~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd  182 (691)
T KOG2048|consen  103 KYNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRIWD  182 (691)
T ss_pred             eEEecCCCcceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEecccCceEEEEE
Confidence            99999999999999999988 899999999777777444333   23445678999999999987 99999999999999


Q ss_pred             CCCCeEEEEE-------e-CCCCcEEEEEE-cCCEEEEEeCCCeEEEEECCCC---ceEeeCCccEEEEEEcCCCc-EEE
Q psy7057         147 STTGKCVHTM-------Y-GHPNFIYSVAA-HGDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVAILPNSD-IVT  213 (557)
Q Consensus       147 ~~~~~~~~~~-------~-~h~~~V~~l~~-~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p~g~-l~s  213 (557)
                      ..++..++..       . +....|+++.+ ....|++|..-|+|.+||....   +.+..|..-|.+++..+++. +++
T Consensus       183 ~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd~tI~sgDS~G~V~FWd~~~gTLiqS~~~h~adVl~Lav~~~~d~vfs  262 (691)
T KOG2048|consen  183 VKSGQTLHIITMQLDRLSKREPTIVWSVLFLRDSTIASGDSAGTVTFWDSIFGTLIQSHSCHDADVLALAVADNEDRVFS  262 (691)
T ss_pred             cCCCceEEEeeecccccccCCceEEEEEEEeecCcEEEecCCceEEEEcccCcchhhhhhhhhcceeEEEEcCCCCeEEE
Confidence            9988776622       1 23457889888 6778999999999999995544   77888899999999999977 999


Q ss_pred             EEcCCcEEEEecCCCCcc--hhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCC
Q psy7057         214 GSSDGIVRVFSANPDRQA--EDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANP  272 (557)
Q Consensus       214 g~~Dg~I~iwd~~~~~~~--~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~  272 (557)
                      +|.|+.|.-+...+....  .......|...+.+++....   .+++|+.|+++.+-....
T Consensus       263 aGvd~~ii~~~~~~~~~~wv~~~~r~~h~hdvrs~av~~~---~l~sgG~d~~l~i~~s~~  320 (691)
T KOG2048|consen  263 AGVDPKIIQYSLTTNKSEWVINSRRDLHAHDVRSMAVIEN---ALISGGRDFTLAICSSRE  320 (691)
T ss_pred             ccCCCceEEEEecCCccceeeeccccCCcccceeeeeecc---eEEecceeeEEEEccccc
Confidence            999999998887765331  11223345556666665544   678999999998877655

>KOG1408|consensus

Probab=99.84  E-value=2.9e-19  Score=184.39  Aligned_cols=260  Identities=18%  Similarity=0.239  Sum_probs=195.9

Q ss_pred             EEEEEEcCCCcEEEEECCCcEEEEcCCC----------------------------------------CCCCCCCCEEEE
Q psy7057          15 VRSLSVTPDGCILSASRDKSAKLWKPND----------------------------------------LSPGAKVNTLLS   54 (557)
Q Consensus        15 V~~l~~spdg~l~sgs~Dg~V~iWd~~~----------------------------------------~~~~~~~~~l~s   54 (557)
                      -.||+.+.+ .++.|+.+|.|++++..+                                        +.|++....|.+
T Consensus       263 AnCIcVs~r-~I~cgCa~g~vrlFnp~tL~y~~Tlpr~halg~d~a~~~q~~~~~s~~~~a~fPD~IA~~Fdet~~klsc  341 (1080)
T KOG1408|consen  263 ANCICVSSR-LIACGCAKGMVRLFNPETLDYAGTLPRSHALGSDTANLSQPEPKNSESSPAIFPDAIACQFDETTDKLSC  341 (1080)
T ss_pred             cceeeeecc-eEEEeeccceeeecCcchhhhccccccccccccchhhcccccccccccCcccCCceeEEEecCCCceEEE
Confidence            356666532 388999999999999876                                        456667788899


Q ss_pred             EECCCeEEEEECCCCeE---EEEEcccCCcEEEEEEcC------------CCEEEEEECCCeEEEEeCCC----cEEEE-
Q psy7057          55 ASWDMTAKLWCLESQQC---KLTIRQHEMAVWGVIQLA------------NGIIVTGCADKTIKLHSEEG----EFLKT-  114 (557)
Q Consensus        55 gs~Dg~i~iwd~~~~~~---~~~l~~h~~~V~~l~~~~------------~~~l~sgs~dg~I~vwd~~~----~~~~~-  114 (557)
                      ...|..+.|||++.-+.   ...+.-|...||.+...|            .+.+++++.|++||+|++.+    ...+. 
T Consensus       342 VYndhSlYvWDvrD~~kvgk~~s~lyHS~ciW~Ve~~p~nv~~~~~aclp~~cF~TCSsD~TIRlW~l~~ctnn~vyrRN  421 (1080)
T KOG1408|consen  342 VYNDHSLYVWDVRDVNKVGKCSSMLYHSACIWDVENLPCNVHSPTAACLPRGCFTTCSSDGTIRLWDLAFCTNNQVYRRN  421 (1080)
T ss_pred             EEcCceEEEEeccccccccceeeeeeccceeeeeccccccccCcccccCCccceeEecCCCcEEEeecccccccceeecc
Confidence            99999999999987432   233445888888876554            45799999999999999543    21110 


Q ss_pred             ---------------------------------EeCCCCCEEEEEEeCCCe-EEEEECCCeEEEEECCCCeEEEEEeCCC
Q psy7057         115 ---------------------------------LTGHTDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHTMYGHP  160 (557)
Q Consensus       115 ---------------------------------l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h~  160 (557)
                                                       ..+....+++++++|+++ |++|..-|+++++++...+....+..|.
T Consensus       422 ils~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~vSp~gqhLAsGDr~GnlrVy~Lq~l~~~~~~eAHe  501 (1080)
T KOG1408|consen  422 ILSANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALAVSPDGQHLASGDRGGNLRVYDLQELEYTCFMEAHE  501 (1080)
T ss_pred             cchhhhhcCccccCchhhhhhccCCcccccchhhcCcccceEEEEECCCcceecccCccCceEEEEehhhhhhhheeccc
Confidence                                             011234699999999988 7799999999999999988888889999


Q ss_pred             CcEEEEEE-----cCCEEEEEeCCCeEEEEECCCC----ceEeeCCc---------------------------------
Q psy7057         161 NFIYSVAA-----HGDLITSGGEDQCVCVYQNKAQ----NSFMIPAM---------------------------------  198 (557)
Q Consensus       161 ~~V~~l~~-----~~~~l~s~s~Dg~I~iwd~~~~----~~~~~~~~---------------------------------  198 (557)
                      ..|.|+.+     ..++|++++.|+.|.+||.+..    +++..|..                                 
T Consensus       502 sEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rny~l~qtld~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~  581 (1080)
T KOG1408|consen  502 SEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRNYDLVQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKA  581 (1080)
T ss_pred             ceeEEEeecCchhhhHhhhhccCCceEEEEecccccchhhhhcccccceeEEEEeecCCceEEEeccCchhhheehhccc
Confidence            99999998     2347899999999999995433    33333332                                 


Q ss_pred             ----------------cEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHh-cccceeEEEeccCCCceeEEEEe
Q psy7057         199 ----------------SVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQA-QYAEEVKKLKSANEQEIGGVKVS  260 (557)
Q Consensus       199 ----------------~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~-~~~~~v~~l~~~~~~~~~~vs~s  260 (557)
                                      .++.+++.|..+ +++++.|+.||||++.++++...+... .+.+....+ ...+..+++++.+
T Consensus       582 ~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQDrnirif~i~sgKq~k~FKgs~~~eG~lIKv-~lDPSgiY~atSc  660 (1080)
T KOG1408|consen  582 SSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQDRNIRIFDIESGKQVKSFKGSRDHEGDLIKV-ILDPSGIYLATSC  660 (1080)
T ss_pred             cCceeccccccccccceEEEeeeCCCcceEEEEecccceEEEeccccceeeeecccccCCCceEEE-EECCCccEEEEee
Confidence                            356666677766 789999999999999998877554433 233444444 3455677889999


Q ss_pred             CCCcEEEEecCCChhh
Q psy7057         261 DDGIVRVFSANPDRQA  276 (557)
Q Consensus       261 ~DG~IrvW~~~~~~~~  276 (557)
                      +|.++.++|...++.+
T Consensus       661 sdktl~~~Df~sgEcv  676 (1080)
T KOG1408|consen  661 SDKTLCFVDFVSGECV  676 (1080)
T ss_pred             cCCceEEEEeccchhh
Confidence            9999999999888664

>KOG0646|consensus

Probab=99.84  E-value=2.2e-19  Score=178.13  Aligned_cols=217  Identities=19%  Similarity=0.234  Sum_probs=180.2

Q ss_pred             CCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EE
Q psy7057          31 RDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-II   93 (557)
Q Consensus        31 ~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l   93 (557)
                      ....+.+|.+..                +..++.|.+|+.|+-.|.+++|.+.+|..+..+..|=..|+|+.|+.++ .|
T Consensus        59 ~rp~l~vw~i~k~~~~~q~~v~Pg~v~al~s~n~G~~l~ag~i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs~i  138 (476)
T KOG0646|consen   59 KRPLLHVWEILKKDQVVQYIVLPGPVHALASSNLGYFLLAGTISGNLYLWELSSGILLNVLSAHYQSITCLKFSDDGSHI  138 (476)
T ss_pred             cCccccccccCchhhhhhhcccccceeeeecCCCceEEEeecccCcEEEEEeccccHHHHHHhhccceeEEEEeCCCcEE
Confidence            445788998876                5567788899998899999999999999999999999999999999999 99


Q ss_pred             EEEECCCeEEEEeC----------CCcEEEEEeCCCCCEEEEEEeCC---CeEEEEECCCeEEEEECCCCeEEEEEeCCC
Q psy7057          94 VTGCADKTIKLHSE----------EGEFLKTLTGHTDCVRGLAVLND---TDFVSCSNDASIRVWDSTTGKCVHTMYGHP  160 (557)
Q Consensus        94 ~sgs~dg~I~vwd~----------~~~~~~~l~~h~~~V~~l~~~~~---~~lvs~s~Dg~I~vwd~~~~~~~~~~~~h~  160 (557)
                      +|||.||.|.+|..          +-.+++.+..|+-+|+++...+.   .+++|+|.|.++++||+..+..+.++. -+
T Consensus       139 iTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~-fp  217 (476)
T KOG0646|consen  139 ITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTIT-FP  217 (476)
T ss_pred             EecCCCccEEEEEEEeecccccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEEe-cC
Confidence            99999999999982          34568889999999999998765   468999999999999999999888876 56


Q ss_pred             CcEEEEEEc--CCEEEEEeCCCeEEEEECCCC-------------------ceEeeCCc--cEEEEEEcCCCc-EEEEEc
Q psy7057         161 NFIYSVAAH--GDLITSGGEDQCVCVYQNKAQ-------------------NSFMIPAM--SVWAVAILPNSD-IVTGSS  216 (557)
Q Consensus       161 ~~V~~l~~~--~~~l~s~s~Dg~I~iwd~~~~-------------------~~~~~~~~--~v~~v~~~p~g~-l~sg~~  216 (557)
                      ..+.+++.+  +..+++|+++|.|.+.++...                   ..+.+|..  .|+|++++-||. |++|+.
T Consensus       218 ~si~av~lDpae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~DgtlLlSGd~  297 (476)
T KOG0646|consen  218 SSIKAVALDPAERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAISTDGTLLLSGDE  297 (476)
T ss_pred             CcceeEEEcccccEEEecCCcceEEeeehhcCCcccccccccccccccceeeeeccccCCcceeEEEEecCccEEEeeCC
Confidence            788888884  468999999999998773211                   23456666  899999999999 889999


Q ss_pred             CCcEEEEecCCCCcchhHHHhcccceeEEEeccC
Q psy7057         217 DGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSAN  250 (557)
Q Consensus       217 Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~  250 (557)
                      ||.|+|||+.+.+......  ...++|+.+...+
T Consensus       298 dg~VcvWdi~S~Q~iRtl~--~~kgpVtnL~i~~  329 (476)
T KOG0646|consen  298 DGKVCVWDIYSKQCIRTLQ--TSKGPVTNLQINP  329 (476)
T ss_pred             CCCEEEEecchHHHHHHHh--hhccccceeEeec
Confidence            9999999998876654333  2556666665533

>KOG0647|consensus

Probab=99.83  E-value=1e-18  Score=164.87  Aligned_cols=244  Identities=18%  Similarity=0.234  Sum_probs=181.7

Q ss_pred             CcccEEEEEEcCCCc--EEEEECCCcEEEEcCCC------------------CCCCCCCCEEEEEECCCeEEEEECCCCe
Q psy7057          11 HSMDVRSLSVTPDGC--ILSASRDKSAKLWKPND------------------LSPGAKVNTLLSASWDMTAKLWCLESQQ   70 (557)
Q Consensus        11 H~~~V~~l~~spdg~--l~sgs~Dg~V~iWd~~~------------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~   70 (557)
                      -.+.|.+|+|||...  ++++|.|++||+|+++.                  ++|+.++..+++|+-|+.+++||+.++ 
T Consensus        26 P~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~-  104 (347)
T KOG0647|consen   26 PEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASG-  104 (347)
T ss_pred             cccchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccCC-
Confidence            457899999999544  55899999999999876                  677888999999999999999999998 


Q ss_pred             EEEEEcccCCcEEEEEEcCCC---EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCeEEEEECCCeEEEEE
Q psy7057          71 CKLTIRQHEMAVWGVIQLANG---IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWD  146 (557)
Q Consensus        71 ~~~~l~~h~~~V~~l~~~~~~---~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd  146 (557)
                      ....+..|..+|.++.|.+..   .|+|||+|++|+.|| ....++.++. -.+.+.++.... ..++.+..++.|.+++
T Consensus       105 Q~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~-LPeRvYa~Dv~~-pm~vVata~r~i~vyn  182 (347)
T KOG0647|consen  105 QVSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQ-LPERVYAADVLY-PMAVVATAERHIAVYN  182 (347)
T ss_pred             CeeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeee-ccceeeehhccC-ceeEEEecCCcEEEEE
Confidence            456677899999999998854   799999999999999 5556666665 445677766532 3466888899999999


Q ss_pred             CCCCeEEEE-Ee-CCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC-----ceEeeCCc---------cEEEEEEcCC
Q psy7057         147 STTGKCVHT-MY-GHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ-----NSFMIPAM---------SVWAVAILPN  208 (557)
Q Consensus       147 ~~~~~~~~~-~~-~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~-----~~~~~~~~---------~v~~v~~~p~  208 (557)
                      ++.+..... .. .-.-.++||+.  +.+..+.|+-.|.+-+..+...     ..++.|..         .|++++|+|.
T Consensus       183 L~n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYaVNsi~FhP~  262 (347)
T KOG0647|consen  183 LENPPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYAVNSIAFHPV  262 (347)
T ss_pred             cCCCcchhhhhcCcccceeeEEEEEecCCceEeeeecceEEEEecCCCCccCceeEEEeccCCCCCCceEEecceEeecc
Confidence            976543221 11 12446788887  6677899999999988875432     45555552         5788999997


Q ss_pred             Cc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEec
Q psy7057         209 SD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSA  270 (557)
Q Consensus       209 g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~  270 (557)
                      .. |+++|+||+..+||-+....+  .....+..++.           ..+...+|.|..|-+
T Consensus       263 hgtlvTaGsDGtf~FWDkdar~kL--k~s~~~~qpIt-----------cc~fn~~G~ifaYA~  312 (347)
T KOG0647|consen  263 HGTLVTAGSDGTFSFWDKDARTKL--KTSETHPQPIT-----------CCSFNRNGSIFAYAL  312 (347)
T ss_pred             cceEEEecCCceEEEecchhhhhh--hccCcCCCccc-----------eeEecCCCCEEEEEe
Confidence            55 999999999999997654332  22223333333           344455666666543

>KOG1274|consensus

Probab=99.83  E-value=1.7e-18  Score=184.11  Aligned_cols=239  Identities=21%  Similarity=0.305  Sum_probs=194.4

Q ss_pred             ccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC---------------CCCCCCCCEEEEEECCCeEEEEECCCCeEE
Q psy7057           9 YGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND---------------LSPGAKVNTLLSASWDMTAKLWCLESQQCK   72 (557)
Q Consensus         9 ~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~---------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~   72 (557)
                      .+|+..-+.|+|.|+|. |++++.||.|++|+...               .+.....+.|++|+.+++|.+|...+++.-
T Consensus        10 yaht~G~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~e~P~ti~~~g~~v~~ia~~s~~f~~~s~~~tv~~y~fps~~~~   89 (933)
T KOG1274|consen   10 YAHTGGLTLICYDPDGEFICTCGSDGDIRKWKTNSDEEEPETIDISGELVSSIACYSNHFLTGSEQNTVLRYKFPSGEED   89 (933)
T ss_pred             hhccCceEEEEEcCCCCEEEEecCCCceEEeecCCcccCCchhhccCceeEEEeecccceEEeeccceEEEeeCCCCCcc
Confidence            57999999999999999 88999999999998655               223345678999999999999999998876


Q ss_pred             EEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEEEEECCC
Q psy7057          73 LTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVWDSTT  149 (557)
Q Consensus        73 ~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~  149 (557)
                      ..+...+-++.+++++.+| .++.||.|-.|++-+ .+......+++|..+|.++.++|.+. +++.+.||.|++||+.+
T Consensus        90 ~iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~~  169 (933)
T KOG1274|consen   90 TILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQD  169 (933)
T ss_pred             ceeeeeeccceEEEEecCCcEEEeecCceeEEEEeccccchheeecccCCceeeeeEcCCCCEEEEEecCceEEEEEccc
Confidence            6666678899999999998 999999999999998 56677889999999999999999988 55889999999999999


Q ss_pred             CeEEEEEeCC--------CCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC---ceE--eeCCccEEEEEEcCCCc-EEE
Q psy7057         150 GKCVHTMYGH--------PNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ---NSF--MIPAMSVWAVAILPNSD-IVT  213 (557)
Q Consensus       150 ~~~~~~~~~h--------~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~---~~~--~~~~~~v~~v~~~p~g~-l~s  213 (557)
                      +.+..++.+-        ...+..++|  ++..|+..+.|++|++|+....   ..+  ..+...+.++.|+|+|. |++
T Consensus       170 ~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~YiAA  249 (933)
T KOG1274|consen  170 GILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPNGKYIAA  249 (933)
T ss_pred             chhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccCCceeheeecccccccceEEEEEcCCCcEEee
Confidence            9887777542        234556777  5557888899999999996554   222  23444589999999999 889


Q ss_pred             EEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCc
Q psy7057         214 GSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQE  253 (557)
Q Consensus       214 g~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~  253 (557)
                      ++.||.|.|||+++..      .+.+...|+.+.+.+...
T Consensus       250 s~~~g~I~vWnv~t~~------~~~~~~~Vc~~aw~p~~n  283 (933)
T KOG1274|consen  250 STLDGQILVWNVDTHE------RHEFKRAVCCEAWKPNAN  283 (933)
T ss_pred             eccCCcEEEEecccch------hccccceeEEEecCCCCC
Confidence            9999999999998721      134556677776665543

>KOG0772|consensus

Probab=99.83  E-value=2.4e-19  Score=179.29  Aligned_cols=229  Identities=15%  Similarity=0.211  Sum_probs=170.3

Q ss_pred             CCCCCCCCEEEEEECCCeEEEEECCCCe----EEEEEc-ccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcEEEE--
Q psy7057          43 LSPGAKVNTLLSASWDMTAKLWCLESQQ----CKLTIR-QHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFLKT--  114 (557)
Q Consensus        43 ~~~~~~~~~l~sgs~Dg~i~iwd~~~~~----~~~~l~-~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~~~--  114 (557)
                      +.+.+.|.++++||.|-+|++||+....    ..+.|. .....|.++.|++.+ .|++.+....++|+|..|..+..  
T Consensus       173 l~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~aqakl~DRdG~~~~e~~  252 (641)
T KOG0772|consen  173 LAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSGSAQAKLLDRDGFEIVEFS  252 (641)
T ss_pred             eeecCCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEecCcceeEEccCCceeeeee
Confidence            6677889999999999999999987542    222232 246689999999988 88888888899999977755432  


Q ss_pred             -----------EeCCCCCEEEEEEeCCCe--EEEEECCCeEEEEECCCCe-EEEEEeC-----CCCcEEEEEE--cCCEE
Q psy7057         115 -----------LTGHTDCVRGLAVLNDTD--FVSCSNDASIRVWDSTTGK-CVHTMYG-----HPNFIYSVAA--HGDLI  173 (557)
Q Consensus       115 -----------l~~h~~~V~~l~~~~~~~--lvs~s~Dg~I~vwd~~~~~-~~~~~~~-----h~~~V~~l~~--~~~~l  173 (557)
                                 -+||...++|.+|+|..+  |++++.||++|+||+...+ .+..++.     ..-.+.+++|  ++.+|
T Consensus       253 KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~i  332 (641)
T KOG0772|consen  253 KGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLI  332 (641)
T ss_pred             ccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCceeeecCCCcchh
Confidence                       368999999999999854  9999999999999987643 4444432     2346778888  78899


Q ss_pred             EEEeCCCeEEEEECCCC------ceEeeCCc--cEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHh-ccccee
Q psy7057         174 TSGGEDQCVCVYQNKAQ------NSFMIPAM--SVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQA-QYAEEV  243 (557)
Q Consensus       174 ~s~s~Dg~I~iwd~~~~------~~~~~~~~--~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~-~~~~~v  243 (557)
                      ++|+.||.|.+|+.+..      ..-..|..  .|+||+|+++|+ |++-+.|+++++||++..+........ ......
T Consensus       333 Aagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~kkpL~~~tgL~t~~~~  412 (641)
T KOG0772|consen  333 AAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFKKPLNVRTGLPTPFPG  412 (641)
T ss_pred             hhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeeccccccchhhhcCCCccCCC
Confidence            99999999999996544      22234554  899999999999 999999999999999876554222211 112334


Q ss_pred             EEEeccCCCceeEEEEeC------CCcEEEEecCC
Q psy7057         244 KKLKSANEQEIGGVKVSD------DGIVRVFSANP  272 (557)
Q Consensus       244 ~~l~~~~~~~~~~vs~s~------DG~IrvW~~~~  272 (557)
                      +.+++.+...+ +++|++      -|++.+|+..+
T Consensus       413 tdc~FSPd~kl-i~TGtS~~~~~~~g~L~f~d~~t  446 (641)
T KOG0772|consen  413 TDCCFSPDDKL-ILTGTSAPNGMTAGTLFFFDRMT  446 (641)
T ss_pred             CccccCCCceE-EEecccccCCCCCceEEEEeccc
Confidence            45556666554 566643      46788887554

>KOG0267|consensus

Probab=99.83  E-value=5.2e-21  Score=198.01  Aligned_cols=216  Identities=22%  Similarity=0.317  Sum_probs=186.1

Q ss_pred             EEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEECCC
Q psy7057           6 TALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCLES   68 (557)
Q Consensus         6 ~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~~~   68 (557)
                      +.+..|...|.|+..-..++ +++|+.|..+-+|.+..                +.++....+|++|+.+|+|++||++.
T Consensus        22 ~~~~~hsaav~~lk~~~s~r~~~~Gg~~~k~~L~~i~kp~~i~S~~~hespIeSl~f~~~E~LlaagsasgtiK~wDlee  101 (825)
T KOG0267|consen   22 REFVAHSAAVGCLKIRKSSRSLVTGGEDEKVNLWAIGKPNAITSLTGHESPIESLTFDTSERLLAAGSASGTIKVWDLEE  101 (825)
T ss_pred             hhhhhhhhhhceeeeeccceeeccCCCceeeccccccCCchhheeeccCCcceeeecCcchhhhcccccCCceeeeehhh
Confidence            45667999999999866667 88999999999998765                55666678899999999999999999


Q ss_pred             CeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeC-CCcEEEEEeCCCCCEEEEEEeCCCeE-EEEECCCeEEEE
Q psy7057          69 QQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSE-EGEFLKTLTGHTDCVRGLAVLNDTDF-VSCSNDASIRVW  145 (557)
Q Consensus        69 ~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~-~~~~~~~l~~h~~~V~~l~~~~~~~l-vs~s~Dg~I~vw  145 (557)
                      .+.+++|.+|...+.++.|+|-+ +.++|+.|+.+++||. ...|.+.+.+|...|.++.|+|+|++ ++++.|.+++||
T Consensus       102 Ak~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~  181 (825)
T KOG0267|consen  102 AKIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTYKSHTRVVDVLRLSPDGRWVASGGEDNTVKIW  181 (825)
T ss_pred             hhhhhhhhccccCcceeeeccceEEeccccccccceehhhhccCceeeecCCcceeEEEeecCCCceeeccCCcceeeee
Confidence            99999999999999999999988 8899999999999994 47899999999999999999999985 588889999999


Q ss_pred             ECCCCeEEEEEeCCCCcEEEEEEcC--CEEEEEeCCCeEEEEECCCCceE---eeCCccEEEEEEcCCCcEEEEEcCCcE
Q psy7057         146 DSTTGKCVHTMYGHPNFIYSVAAHG--DLITSGGEDQCVCVYQNKAQNSF---MIPAMSVWAVAILPNSDIVTGSSDGIV  220 (557)
Q Consensus       146 d~~~~~~~~~~~~h~~~V~~l~~~~--~~l~s~s~Dg~I~iwd~~~~~~~---~~~~~~v~~v~~~p~g~l~sg~~Dg~I  220 (557)
                      |...|+.+..|..|...+.++.+++  -++++|+.|+++++||+++...+   ......|.+++|.|++..+.++..-++
T Consensus       182 d~~agk~~~ef~~~e~~v~sle~hp~e~Lla~Gs~d~tv~f~dletfe~I~s~~~~~~~v~~~~fn~~~~~~~~G~q~sl  261 (825)
T KOG0267|consen  182 DLTAGKLSKEFKSHEGKVQSLEFHPLEVLLAPGSSDRTVRFWDLETFEVISSGKPETDGVRSLAFNPDGKIVLSGEQISL  261 (825)
T ss_pred             cccccccccccccccccccccccCchhhhhccCCCCceeeeeccceeEEeeccCCccCCceeeeecCCceeeecCchhhh
Confidence            9999999999999999999999954  36889999999999999866333   334568999999999995544443334


Q ss_pred             E
Q psy7057         221 R  221 (557)
Q Consensus       221 ~  221 (557)
                      +
T Consensus       262 ~  262 (825)
T KOG0267|consen  262 S  262 (825)
T ss_pred             h
Confidence            3

>KOG2445|consensus

Probab=99.82  E-value=1.1e-18  Score=164.88  Aligned_cols=227  Identities=22%  Similarity=0.322  Sum_probs=168.2

Q ss_pred             CCCCCCCCEEEEEECCCeEEEEECCC----CeEEEEEcccCCcEEEEEEcCC--C-EEEEEECCCeEEEEeCC-------
Q psy7057          43 LSPGAKVNTLLSASWDMTAKLWCLES----QQCKLTIRQHEMAVWGVIQLAN--G-IIVTGCADKTIKLHSEE-------  108 (557)
Q Consensus        43 ~~~~~~~~~l~sgs~Dg~i~iwd~~~----~~~~~~l~~h~~~V~~l~~~~~--~-~l~sgs~dg~I~vwd~~-------  108 (557)
                      ++++..|+++++|+.|.+++|||.+.    ..+....+.|.+.|+.+.|.+.  | .++++|.|+++.||...       
T Consensus        19 Vs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWEE~~~~~~~~   98 (361)
T KOG2445|consen   19 VSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWEEQEKSEEAH   98 (361)
T ss_pred             eeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeeeecccccccc
Confidence            45666799999999999999999644    3577788999999999999873  3 89999999999999731       


Q ss_pred             C---cEEEEEeCCCCCEEEEEEeCC--Ce-EEEEECCCeEEEEECCC------CeEEEEEe-------CCCCcEEEEEEc
Q psy7057         109 G---EFLKTLTGHTDCVRGLAVLND--TD-FVSCSNDASIRVWDSTT------GKCVHTMY-------GHPNFIYSVAAH  169 (557)
Q Consensus       109 ~---~~~~~l~~h~~~V~~l~~~~~--~~-lvs~s~Dg~I~vwd~~~------~~~~~~~~-------~h~~~V~~l~~~  169 (557)
                      +   ....++......|+.++|.|.  |. +++++.||++|||+.-.      ......++       .+.....|+.|+
T Consensus        99 ~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~~~~~~~CvsWn  178 (361)
T KOG2445|consen   99 GRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGKNKQPCFCVSWN  178 (361)
T ss_pred             cceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCcccccCcceEEeec
Confidence            1   224566777889999999997  44 77999999999998643      23333333       356677888883


Q ss_pred             -----CCEEEEEeCC-----CeEEEEECCCC-------ceEeeCCccEEEEEEcCC-Cc----EEEEEcCCcEEEEecCC
Q psy7057         170 -----GDLITSGGED-----QCVCVYQNKAQ-------NSFMIPAMSVWAVAILPN-SD----IVTGSSDGIVRVFSANP  227 (557)
Q Consensus       170 -----~~~l~s~s~D-----g~I~iwd~~~~-------~~~~~~~~~v~~v~~~p~-g~----l~sg~~Dg~I~iwd~~~  227 (557)
                           ..+|+.|+.+     +.++||...+.       .++..|..+|++++|.|+ |+    +++++.|| ||||.+..
T Consensus       179 ~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA~kDg-v~I~~v~~  257 (361)
T KOG2445|consen  179 PSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNIGRSYHLLAVATKDG-VRIFKVKV  257 (361)
T ss_pred             cccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeeccccCCceeeEEEeecCc-EEEEEEee
Confidence                 3467777766     47888873322       456688999999999998 33    88999999 99999985


Q ss_pred             CCcc------------------hhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecC
Q psy7057         228 DRQA------------------EDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSAN  271 (557)
Q Consensus       228 ~~~~------------------~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~  271 (557)
                      .+..                  ....+..|.+.+..+.+.-.. ..+.+.+.||+||+|..+
T Consensus       258 ~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtG-tiLsStGdDG~VRLWkan  318 (361)
T KOG2445|consen  258 ARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTG-TILSSTGDDGCVRLWKAN  318 (361)
T ss_pred             ccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeee-eEEeecCCCceeeehhhh
Confidence            3211                  112234566667776664433 346788999999999744

>KOG2106|consensus

Probab=99.82  E-value=3.6e-18  Score=170.62  Aligned_cols=265  Identities=17%  Similarity=0.262  Sum_probs=197.3

Q ss_pred             EEEeccCcccEEEEEEcCCCc-EEEEECCC--------cEEEEcCCC---------------------------------
Q psy7057           5 STALYGHSMDVRSLSVTPDGC-ILSASRDK--------SAKLWKPND---------------------------------   42 (557)
Q Consensus         5 ~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg--------~V~iWd~~~---------------------------------   42 (557)
                      ++...||...|.|++.+||.. +++|-.-|        .|||||..+                                 
T Consensus        97 Qr~y~GH~ddikc~~vHPdri~vatGQ~ag~~g~~~~phvriWdsv~L~TL~V~g~f~~GV~~vaFsk~~~G~~l~~vD~  176 (626)
T KOG2106|consen   97 QRHYLGHNDDIKCMAVHPDRIRVATGQGAGTSGRPLQPHVRIWDSVTLSTLHVIGFFDRGVTCVAFSKINGGSLLCAVDD  176 (626)
T ss_pred             cccccCCCCceEEEeecCCceeeccCcccccCCCcCCCeeeecccccceeeeeeccccccceeeeecccCCCceEEEecC
Confidence            456678888888888888865 55554433        488888322                                 


Q ss_pred             -----------------------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEE---Eccc-CCcEEEEEEcC
Q psy7057          43 -----------------------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLT---IRQH-EMAVWGVIQLA   89 (557)
Q Consensus        43 -----------------------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~---l~~h-~~~V~~l~~~~   89 (557)
                                                   ..++|....++.....+.+..|+++.+....+   +..+ +..|.|++|.+
T Consensus       177 s~~h~lSVWdWqk~~~~~~vk~sne~v~~a~FHPtd~nliit~Gk~H~~Fw~~~~~~l~k~~~~fek~ekk~Vl~v~F~e  256 (626)
T KOG2106|consen  177 SNPHMLSVWDWQKKAKLGPVKTSNEVVFLATFHPTDPNLIITCGKGHLYFWTLRGGSLVKRQGIFEKREKKFVLCVTFLE  256 (626)
T ss_pred             CCccccchhhchhhhccCcceeccceEEEEEeccCCCcEEEEeCCceEEEEEccCCceEEEeeccccccceEEEEEEEcC
Confidence                                         34555555566666678899999988754433   4333 57899999999


Q ss_pred             CCEEEEEECCCeEEEEeCCC-cEEEEEeCCCCCEEEEEEeCCCeEEEEECCCeEEEEECCCCeE------------EE--
Q psy7057          90 NGIIVTGCADKTIKLHSEEG-EFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKC------------VH--  154 (557)
Q Consensus        90 ~~~l~sgs~dg~I~vwd~~~-~~~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~~------------~~--  154 (557)
                      ++.+++|..+|.|.||+..+ +..+....|.+.|.+++...+|.|+||+.|..|..||-. -+.            ++  
T Consensus       257 ngdviTgDS~G~i~Iw~~~~~~~~k~~~aH~ggv~~L~~lr~GtllSGgKDRki~~Wd~~-y~k~r~~elPe~~G~iRtv  335 (626)
T KOG2106|consen  257 NGDVITGDSGGNILIWSKGTNRISKQVHAHDGGVFSLCMLRDGTLLSGGKDRKIILWDDN-YRKLRETELPEQFGPIRTV  335 (626)
T ss_pred             CCCEEeecCCceEEEEeCCCceEEeEeeecCCceEEEEEecCccEeecCccceEEecccc-ccccccccCchhcCCeeEE
Confidence            99999999999999999544 344555589999999999999999999999999999821 100            01  


Q ss_pred             ---------------------------EEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCCceEeeCCccEEEEEE
Q psy7057         155 ---------------------------TMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAI  205 (557)
Q Consensus       155 ---------------------------~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~v~~v~~  205 (557)
                                                 +..+|....+.++.  +.+.+++++.|+.+++|+-....--.....++.|+.|
T Consensus       336 ~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~delwgla~hps~~q~~T~gqdk~v~lW~~~k~~wt~~~~d~~~~~~f  415 (626)
T KOG2106|consen  336 AEGKGDILVGTTRNFILQGTLENGFTLTVQGHGDELWGLATHPSKNQLLTCGQDKHVRLWNDHKLEWTKIIEDPAECADF  415 (626)
T ss_pred             ecCCCcEEEeeccceEEEeeecCCceEEEEecccceeeEEcCCChhheeeccCcceEEEccCCceeEEEEecCceeEeec
Confidence                                       11356666777777  4558999999999999994444333455678999999


Q ss_pred             cCCCcEEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCCh
Q psy7057         206 LPNSDIVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDR  274 (557)
Q Consensus       206 ~p~g~l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~~  274 (557)
                      +|.|.++.|...|...+.|..+........   -...+..+.+.+.. ..++.||.|+.|.||.++.+.
T Consensus       416 hpsg~va~Gt~~G~w~V~d~e~~~lv~~~~---d~~~ls~v~ysp~G-~~lAvgs~d~~iyiy~Vs~~g  480 (626)
T KOG2106|consen  416 HPSGVVAVGTATGRWFVLDTETQDLVTIHT---DNEQLSVVRYSPDG-AFLAVGSHDNHIYIYRVSANG  480 (626)
T ss_pred             cCcceEEEeeccceEEEEecccceeEEEEe---cCCceEEEEEcCCC-CEEEEecCCCeEEEEEECCCC
Confidence            999988899999999999998754432222   14556666666554 468999999999999998753

>KOG0321|consensus

Probab=99.82  E-value=1.3e-18  Score=178.23  Aligned_cols=255  Identities=17%  Similarity=0.181  Sum_probs=189.6

Q ss_pred             EEEcCC-C-c--EEEEECCCcEEEEcCCC----------------------CCCCCCCCEEEEEECCCeEEEEECCCCeE
Q psy7057          18 LSVTPD-G-C--ILSASRDKSAKLWKPND----------------------LSPGAKVNTLLSASWDMTAKLWCLESQQC   71 (557)
Q Consensus        18 l~~spd-g-~--l~sgs~Dg~V~iWd~~~----------------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~   71 (557)
                      ..|++- + +  |+.+..||.|.++|...                      +.+.+....|++++.|.++++||+++.++
T Consensus        55 ~sFs~~~n~eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~l  134 (720)
T KOG0321|consen   55 DSFSAAPNKEHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSRL  134 (720)
T ss_pred             ccccCCCCccceEEEecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCCCceeEEEccCCceeeeeeecccee
Confidence            556552 2 2  77899999999999866                      55666677899999999999999999988


Q ss_pred             EEE--EcccCCcEEEEEEcCCC--EEEEEECCCeEEEEeCCCcE----------------------------EEEEeCCC
Q psy7057          72 KLT--IRQHEMAVWGVIQLANG--IIVTGCADKTIKLHSEEGEF----------------------------LKTLTGHT  119 (557)
Q Consensus        72 ~~~--l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~~~~~----------------------------~~~l~~h~  119 (557)
                      ...  +.+|...|.+++|.+.+  .|++|+.||.|.|||..-..                            ++.-+.|.
T Consensus       135 ~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s  214 (720)
T KOG0321|consen  135 VGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAAS  214 (720)
T ss_pred             ecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhcccccccccc
Confidence            776  89999999999999976  89999999999999932110                            01112233


Q ss_pred             C----CEEEEEEeCCCeEEEEEC-CCeEEEEECCCCeEEEEE--------eCC---CCcEEEEEE--cCCEEEEEeCCCe
Q psy7057         120 D----CVRGLAVLNDTDFVSCSN-DASIRVWDSTTGKCVHTM--------YGH---PNFIYSVAA--HGDLITSGGEDQC  181 (557)
Q Consensus       120 ~----~V~~l~~~~~~~lvs~s~-Dg~I~vwd~~~~~~~~~~--------~~h---~~~V~~l~~--~~~~l~s~s~Dg~  181 (557)
                      .    .|+.+.|-.+..|++++. |+.|+|||++...+....        ..|   .-.+.++..  .|.+|++.+.|+.
T Consensus       215 ~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD~s  294 (720)
T KOG0321|consen  215 NTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTDNS  294 (720)
T ss_pred             CceeeeeEEEEEeccceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCCeEEEEecCCc
Confidence            2    356677766777998777 999999999876543222        223   234556666  4678777777999


Q ss_pred             EEEEECCCC-----ceEeeCC--ccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCc
Q psy7057         182 VCVYQNKAQ-----NSFMIPA--MSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQE  253 (557)
Q Consensus       182 I~iwd~~~~-----~~~~~~~--~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~  253 (557)
                      |++|++...     ..+.++.  ..-..-..+|++. +++|+.|...++|.++..... .....+|.-++..+.+.+...
T Consensus       295 Iy~ynm~s~s~sP~~~~sg~~~~sf~vks~lSpd~~~l~SgSsd~~ayiw~vs~~e~~-~~~l~Ght~eVt~V~w~pS~~  373 (720)
T KOG0321|consen  295 IYFYNMRSLSISPVAEFSGKLNSSFYVKSELSPDDCSLLSGSSDEQAYIWVVSSPEAP-PALLLGHTREVTTVRWLPSAT  373 (720)
T ss_pred             EEEEeccccCcCchhhccCcccceeeeeeecCCCCceEeccCCCcceeeeeecCccCC-hhhhhCcceEEEEEeeccccC
Confidence            999997655     1222211  1122334688888 899999999999999876654 455667888899999888777


Q ss_pred             eeEEEEeCCCcEEEEecCCC
Q psy7057         254 IGGVKVSDDGIVRVFSANPD  273 (557)
Q Consensus       254 ~~~vs~s~DG~IrvW~~~~~  273 (557)
                      .-+++++.|-.++||++..+
T Consensus       374 t~v~TcSdD~~~kiW~l~~~  393 (720)
T KOG0321|consen  374 TPVATCSDDFRVKIWRLSNG  393 (720)
T ss_pred             CCceeeccCcceEEEeccCc
Confidence            77799999999999999654

>KOG1063|consensus

Probab=99.82  E-value=3.9e-18  Score=176.23  Aligned_cols=273  Identities=20%  Similarity=0.275  Sum_probs=206.9

Q ss_pred             CcEEEEEeccCcccEEEEEEcCCCc----EEEEECCCcEEEEcCCC----------------------------------
Q psy7057           1 MYKLSTALYGHSMDVRSLSVTPDGC----ILSASRDKSAKLWKPND----------------------------------   42 (557)
Q Consensus         1 ~~kl~~~l~gH~~~V~~l~~spdg~----l~sgs~Dg~V~iWd~~~----------------------------------   42 (557)
                      +|+....|.||.+.|++|+|...+.    |+|+|.|..||||.+.-                                  
T Consensus       180 ~f~~v~el~GH~DWIrsl~f~~~~~~~~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~~~~~f~~l~~i~~~is~  259 (764)
T KOG1063|consen  180 SFARVAELEGHTDWIRSLAFARLGGDDLLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLSNLPVFMILEEIQYRISF  259 (764)
T ss_pred             ceeEEEEeeccchhhhhhhhhccCCCcEEEEecCCceEEEEEEEEecCCccccccccccccccCCceeeeeeeEEEEEeh
Confidence            4788999999999999999987542    78999999999996532                                  


Q ss_pred             -------------CCCCCCCCEEEEEECCCeEEEEECCCCe----EEE---EEcccCCcEEEEEEcCCC-EEEEEECCCe
Q psy7057          43 -------------LSPGAKVNTLLSASWDMTAKLWCLESQQ----CKL---TIRQHEMAVWGVIQLANG-IIVTGCADKT  101 (557)
Q Consensus        43 -------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~----~~~---~l~~h~~~V~~l~~~~~~-~l~sgs~dg~  101 (557)
                                   +.+.|.+..|+++|.|.++.+|...+..    ...   .+.+.....+...|+|++ .+++-+..|.
T Consensus       260 eall~GHeDWV~sv~W~p~~~~LLSASaDksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~n~~~ii~~g~~Gg  339 (764)
T KOG1063|consen  260 EALLMGHEDWVYSVWWHPEGLDLLSASADKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSPNSNVIIAHGRTGG  339 (764)
T ss_pred             hhhhcCcccceEEEEEccchhhheecccCcceEEEecCCccceEEEEEEeecccccccceeeEEEcCCCCEEEEecccCc
Confidence                         4566777889999999999999986642    122   223334567889999988 8888889999


Q ss_pred             EEEEeCCC----cEEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEEEEECC-------------------------C--
Q psy7057         102 IKLHSEEG----EFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVWDST-------------------------T--  149 (557)
Q Consensus       102 I~vwd~~~----~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~-------------------------~--  149 (557)
                      .++|....    .+...+.||.+.|+.+.|+|.|. |++.|.|.+-|++-.-                         +  
T Consensus       340 ~hlWkt~d~~~w~~~~~iSGH~~~V~dv~W~psGeflLsvs~DQTTRlFa~wg~q~~wHEiaRPQiHGyDl~c~~~vn~~  419 (764)
T KOG1063|consen  340 FHLWKTKDKTFWTQEPVISGHVDGVKDVDWDPSGEFLLSVSLDQTTRLFARWGRQQEWHEIARPQIHGYDLTCLSFVNED  419 (764)
T ss_pred             EEEEeccCccceeeccccccccccceeeeecCCCCEEEEeccccceeeecccccccceeeecccccccccceeeehccCC
Confidence            99997221    23445678999999999999887 5588888888874211                         0  


Q ss_pred             --------CeEEEE------------------------------------------------------------------
Q psy7057         150 --------GKCVHT------------------------------------------------------------------  155 (557)
Q Consensus       150 --------~~~~~~------------------------------------------------------------------  155 (557)
                              .+.++.                                                                  
T Consensus       420 ~~FVSgAdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~~~p~~  499 (764)
T KOG1063|consen  420 LQFVSGADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAETPLAAAPCE  499 (764)
T ss_pred             ceeeecccceeeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCcccccccccccceeeecccccCchh
Confidence                    001111                                                                  


Q ss_pred             ---------------------EeCCCCcEEEEEE--cCCEEEEEeCC-----CeEEEEECCCC---ceEeeCCccEEEEE
Q psy7057         156 ---------------------MYGHPNFIYSVAA--HGDLITSGGED-----QCVCVYQNKAQ---NSFMIPAMSVWAVA  204 (557)
Q Consensus       156 ---------------------~~~h~~~V~~l~~--~~~~l~s~s~D-----g~I~iwd~~~~---~~~~~~~~~v~~v~  204 (557)
                                           +.||.-.|++++.  ++++++|++..     ..|++|+...-   +.+..|.-.|+.++
T Consensus       500 L~ePP~EdqLq~~tLwPEv~KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~HsLTVT~l~  579 (764)
T KOG1063|consen  500 LTEPPTEDQLQQNTLWPEVHKLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQELEGHSLTVTRLA  579 (764)
T ss_pred             ccCCChHHHHHHhccchhhHHhccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhheecccceEEEEEE
Confidence                                 1356666788888  47888888755     35899997654   67889999999999


Q ss_pred             EcCCCc-EEEEEcCCcEEEEecCCCCcch--hHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCCh
Q psy7057         205 ILPNSD-IVTGSSDGIVRVFSANPDRQAE--DAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDR  274 (557)
Q Consensus       205 ~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~--~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~~  274 (557)
                      |+|+++ |++.|.|+++.+|.........  ......|...|....+.|... +++|+|.|.+|+||....++
T Consensus       580 FSpdg~~LLsvsRDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~-~FaTaSRDK~VkVW~~~~~~  651 (764)
T KOG1063|consen  580 FSPDGRYLLSVSRDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEK-YFATASRDKKVKVWEEPDLR  651 (764)
T ss_pred             ECCCCcEEEEeecCceEEeeeeecccchhhhhccccccceEEEEcccCcccc-eeEEecCCceEEEEeccCch
Confidence            999999 8999999999999985443221  122456777777777776655 49999999999999988774

>KOG1036|consensus

Probab=99.82  E-value=4.6e-18  Score=161.02  Aligned_cols=237  Identities=19%  Similarity=0.247  Sum_probs=178.3

Q ss_pred             cccEEEEEEcCCCc-EEEEECCCcEEEEcCCC---------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEE
Q psy7057          12 SMDVRSLSVTPDGC-ILSASRDKSAKLWKPND---------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTI   75 (557)
Q Consensus        12 ~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~---------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l   75 (557)
                      .+.|++|.|+|.+. |+.+|.||++++|+...               +++. +...+++|+-||.|+++|+.+++. ..+
T Consensus        13 ~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~l~~~~~~~~plL~c~F~-d~~~~~~G~~dg~vr~~Dln~~~~-~~i   90 (323)
T KOG1036|consen   13 EDGISSVKFSPSSSDLLVSSWDGSLRLYDVPANSLKLKFKHGAPLLDCAFA-DESTIVTGGLDGQVRRYDLNTGNE-DQI   90 (323)
T ss_pred             hhceeeEEEcCcCCcEEEEeccCcEEEEeccchhhhhheecCCceeeeecc-CCceEEEeccCceEEEEEecCCcc-eee
Confidence            57899999998776 99999999999999876               3333 356899999999999999988654 456


Q ss_pred             cccCCcEEEEEEcCC-CEEEEEECCCeEEEEeCCCcE-EEEEeCCCCCEEEEEEeCCCeEEEEECCCeEEEEECCCCeEE
Q psy7057          76 RQHEMAVWGVIQLAN-GIIVTGCADKTIKLHSEEGEF-LKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCV  153 (557)
Q Consensus        76 ~~h~~~V~~l~~~~~-~~l~sgs~dg~I~vwd~~~~~-~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~~~  153 (557)
                      ..|...|.|+.+++. +.+++||+|++|++||...+. ...+. ....|.++... ++.|+.|+.|..+.+||+++....
T Consensus        91 gth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~~~d-~~kkVy~~~v~-g~~LvVg~~~r~v~iyDLRn~~~~  168 (323)
T KOG1036|consen   91 GTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVGTFD-QGKKVYCMDVS-GNRLVVGTSDRKVLIYDLRNLDEP  168 (323)
T ss_pred             ccCCCceEEEEeeccCCeEEEcccCccEEEEeccccccccccc-cCceEEEEecc-CCEEEEeecCceEEEEEcccccch
Confidence            669999999999984 599999999999999955433 33333 34589998876 356889999999999999986543


Q ss_pred             EEEe--CCCCcEEEEEE--cCCEEEEEeCCCeEEEE--ECCCC-----ceEeeCC---------ccEEEEEEcCCCc-EE
Q psy7057         154 HTMY--GHPNFIYSVAA--HGDLITSGGEDQCVCVY--QNKAQ-----NSFMIPA---------MSVWAVAILPNSD-IV  212 (557)
Q Consensus       154 ~~~~--~h~~~V~~l~~--~~~~l~s~s~Dg~I~iw--d~~~~-----~~~~~~~---------~~v~~v~~~p~g~-l~  212 (557)
                      .+..  .-.-.++|+++  ++.-++++|-||.|.+=  |....     ..++.|.         .+|.+++|+|-.. |+
T Consensus       169 ~q~reS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~Fhp~~~tfa  248 (323)
T KOG1036|consen  169 FQRRESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAFHPIHGTFA  248 (323)
T ss_pred             hhhccccceeEEEEEEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEeeecccCCceEEEEeceeEeccccceEE
Confidence            3221  23457888888  55779999999988764  43311     3344443         3799999999865 99


Q ss_pred             EEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCce
Q psy7057         213 TGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEI  254 (557)
Q Consensus       213 sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~  254 (557)
                      ||+.||.|.+||..+.+...  ....+..+|..+.+......
T Consensus       249 TgGsDG~V~~Wd~~~rKrl~--q~~~~~~SI~slsfs~dG~~  288 (323)
T KOG1036|consen  249 TGGSDGIVNIWDLFNRKRLK--QLAKYETSISSLSFSMDGSL  288 (323)
T ss_pred             ecCCCceEEEccCcchhhhh--hccCCCCceEEEEeccCCCe
Confidence            99999999999998766543  33334555666655555443

>KOG0294|consensus

Probab=99.82  E-value=1.3e-18  Score=164.94  Aligned_cols=201  Identities=18%  Similarity=0.294  Sum_probs=161.4

Q ss_pred             EEEEECCCcEEEEcCCC----------------CCCCCC--CCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEE
Q psy7057          26 ILSASRDKSAKLWKPND----------------LSPGAK--VNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQ   87 (557)
Q Consensus        26 l~sgs~Dg~V~iWd~~~----------------~~~~~~--~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~   87 (557)
                      +++||.|-+|+|||+..                +.+.+.  .+.|++|+.||.|.+|+.....++.++++|...|+.++.
T Consensus        56 ~aSGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W~~~~slK~H~~~Vt~lsi  135 (362)
T KOG0294|consen   56 VASGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGSWELLKSLKAHKGQVTDLSI  135 (362)
T ss_pred             EeccCCCCcEEEEeccchhhhcceeccccceEEEEecCCcchhheeeecCCCcEEEEEcCCeEEeeeecccccccceeEe
Confidence            57899999999999987                333332  348999999999999999999999999999999999999


Q ss_pred             cCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEEEEECCCCeEEEEEeCCCCcEE
Q psy7057          88 LANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIY  164 (557)
Q Consensus        88 ~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~  164 (557)
                      +|.+ +-++.+.|+.+++|| .+|+....+.- ...-+.+.|+|.|. |+.++. ..|-+|.+.+.+....+.. +..+.
T Consensus       136 HPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~L-~~~at~v~w~~~Gd~F~v~~~-~~i~i~q~d~A~v~~~i~~-~~r~l  212 (362)
T KOG0294|consen  136 HPSGKLALSVGGDQVLRTWNLVRGRVAFVLNL-KNKATLVSWSPQGDHFVVSGR-NKIDIYQLDNASVFREIEN-PKRIL  212 (362)
T ss_pred             cCCCceEEEEcCCceeeeehhhcCccceeecc-CCcceeeEEcCCCCEEEEEec-cEEEEEecccHhHhhhhhc-cccce
Confidence            9999 778899999999999 56665444431 22234489999987 555554 5699999887776665553 35677


Q ss_pred             EEEE-cCCEEEEEeCCCeEEEEECCCC---ceEeeCCccEEEEEEc--CCCc-EEEEEcCCcEEEEecCCCC
Q psy7057         165 SVAA-HGDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVAIL--PNSD-IVTGSSDGIVRVFSANPDR  229 (557)
Q Consensus       165 ~l~~-~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~--p~g~-l~sg~~Dg~I~iwd~~~~~  229 (557)
                      |+.| ++..|++|++|+.|++||....   ..+..|...|-++.+.  |++. |+++++||.|+|||++...
T Consensus       213 ~~~~l~~~~L~vG~d~~~i~~~D~ds~~~~~~~~AH~~RVK~i~~~~~~~~~~lvTaSSDG~I~vWd~~~~~  284 (362)
T KOG0294|consen  213 CATFLDGSELLVGGDNEWISLKDTDSDTPLTEFLAHENRVKDIASYTNPEHEYLVTASSDGFIKVWDIDMET  284 (362)
T ss_pred             eeeecCCceEEEecCCceEEEeccCCCccceeeecchhheeeeEEEecCCceEEEEeccCceEEEEEccccc
Confidence            8888 8889999999999999996643   7778899999999854  3455 8999999999999998653

>KOG1446|consensus

Probab=99.81  E-value=1.3e-17  Score=158.80  Aligned_cols=241  Identities=15%  Similarity=0.122  Sum_probs=176.7

Q ss_pred             EEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEEC--CCeEEEEECCCCeEEEEEcccCCcEEEEEEc
Q psy7057          27 LSASRDKSAKLWKPND----------------LSPGAKVNTLLSASW--DMTAKLWCLESQQCKLTIRQHEMAVWGVIQL   88 (557)
Q Consensus        27 ~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~--Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~   88 (557)
                      ++++.|.+++|||..+                ..+......++.++.  |.+||..++.+.+.++.+.||...|.+++.+
T Consensus        30 itss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl~dNkylRYF~GH~~~V~sL~~s  109 (311)
T KOG1446|consen   30 ITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSLHDNKYLRYFPGHKKRVNSLSVS  109 (311)
T ss_pred             EEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceEEEEeecCceEEEcCCCCceEEEEEec
Confidence            4566777888888766                333344566777776  8999999999999999999999999999999


Q ss_pred             CCC-EEEEEECCCeEEEEeCC-CcEEEEEeCCCCCEEEEEEeCCCeEE-EEECCCeEEEEECCCC--eEEEEEeC---CC
Q psy7057          89 ANG-IIVTGCADKTIKLHSEE-GEFLKTLTGHTDCVRGLAVLNDTDFV-SCSNDASIRVWDSTTG--KCVHTMYG---HP  160 (557)
Q Consensus        89 ~~~-~l~sgs~dg~I~vwd~~-~~~~~~l~~h~~~V~~l~~~~~~~lv-s~s~Dg~I~vwd~~~~--~~~~~~~~---h~  160 (557)
                      |-+ .+++++.|++|++||++ .++...+.....  ..+++.|+|.++ ++.....|++||+|.-  .+..++.-   -.
T Consensus       110 P~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~~--pi~AfDp~GLifA~~~~~~~IkLyD~Rs~dkgPF~tf~i~~~~~  187 (311)
T KOG1446|consen  110 PKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSGR--PIAAFDPEGLIFALANGSELIKLYDLRSFDKGPFTTFSITDNDE  187 (311)
T ss_pred             CCCCeEEecccCCeEEeeEecCCCCceEEecCCC--cceeECCCCcEEEEecCCCeEEEEEecccCCCCceeEccCCCCc
Confidence            976 99999999999999954 555555543333  345789999854 5665569999999863  35555543   35


Q ss_pred             CcEEEEEE--cCCEEEEEeCCCeEEEEECCCC---ceEeeCCc---cEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcc
Q psy7057         161 NFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ---NSFMIPAM---SVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQA  231 (557)
Q Consensus       161 ~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~---~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~  231 (557)
                      .....|.|  +|+.++.++..+.+++.|.-.+   ..+..+..   .--+.+|.|+++ +++|+.||+|.+|+++++...
T Consensus       188 ~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ftPds~Fvl~gs~dg~i~vw~~~tg~~v  267 (311)
T KOG1446|consen  188 AEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGNLPLSATFTPDSKFVLSGSDDGTIHVWNLETGKKV  267 (311)
T ss_pred             cceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCCcceeEEECCCCcEEEEecCCCcEEEEEcCCCcEe
Confidence            67788888  8999999999999999994333   44444332   225788999999 778888999999999887665


Q ss_pred             hhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCC
Q psy7057         232 EDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPD  273 (557)
Q Consensus       232 ~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~  273 (557)
                      ...... ...++..+.+   ++....-.+.+..+-+|-.+..
T Consensus       268 ~~~~~~-~~~~~~~~~f---nP~~~mf~sa~s~l~fw~p~~~  305 (311)
T KOG1446|consen  268 AVLRGP-NGGPVSCVRF---NPRYAMFVSASSNLVFWLPDED  305 (311)
T ss_pred             eEecCC-CCCCcccccc---CCceeeeeecCceEEEEecccc
Confidence            332221 3344444443   4445567788889999976543

>KOG1034|consensus

Probab=99.81  E-value=1.3e-18  Score=165.66  Aligned_cols=270  Identities=17%  Similarity=0.271  Sum_probs=199.0

Q ss_pred             CcEEEEEe-ccCcccEEEEEEcCC---C--cEEEEECCCcEEEEcCCC-------------------------CCCCCCC
Q psy7057           1 MYKLSTAL-YGHSMDVRSLSVTPD---G--CILSASRDKSAKLWKPND-------------------------LSPGAKV   49 (557)
Q Consensus         1 ~~kl~~~l-~gH~~~V~~l~~spd---g--~l~sgs~Dg~V~iWd~~~-------------------------~~~~~~~   49 (557)
                      .|++...+ ..|..+|..++|++-   +  .+++......+.+|....                         .......
T Consensus        26 ~yk~t~~l~ed~~~~I~gv~fN~~~~~~e~~vfatvG~~rvtiy~c~~d~~ir~lq~y~D~d~~Esfytcsw~yd~~~~~  105 (385)
T KOG1034|consen   26 SYKYTNHLKEDHNKPIFGVAFNSFLGCDEPQVFATVGGNRVTIYECPGDGGIRLLQSYADEDHDESFYTCSWSYDSNTGN  105 (385)
T ss_pred             ceEeeeehhccCCCccceeeeehhcCCCCCceEEEeCCcEEEEEEECCccceeeeeeccCCCCCcceEEEEEEecCCCCC
Confidence            47777666 468899999999851   1  244444445666665433                         1111125


Q ss_pred             CEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEe-CCCcEEEEE---eCCCCCEE
Q psy7057          50 NTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHS-EEGEFLKTL---TGHTDCVR  123 (557)
Q Consensus        50 ~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd-~~~~~~~~l---~~h~~~V~  123 (557)
                      .+++.|+.-|.|+|.|+.++++...+.+|...|+.+.+.|..  +++++|.|.+||+|+ .+..++..+   .+|.+.|.
T Consensus       106 p~la~~G~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeVL  185 (385)
T KOG1034|consen  106 PFLAAGGYLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEVL  185 (385)
T ss_pred             eeEEeecceeEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEecccccccCcEE
Confidence            678889999999999999999999999999999999999987  999999999999999 566777765   57999999


Q ss_pred             EEEEeCCCe-EEEEECCCeEEEEECCCCe------EE-------------------E---EEeCCCCcEEEEEEcCCEEE
Q psy7057         124 GLAVLNDTD-FVSCSNDASIRVWDSTTGK------CV-------------------H---TMYGHPNFIYSVAAHGDLIT  174 (557)
Q Consensus       124 ~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~------~~-------------------~---~~~~h~~~V~~l~~~~~~l~  174 (557)
                      ++.|++++. |++|+.|.+|++|++...+      +.                   .   +-..|...|-|+.|-|++++
T Consensus       186 SvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~diHrnyVDCvrw~gd~il  265 (385)
T KOG1034|consen  186 SVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFSTTDIHRNYVDCVRWFGDFIL  265 (385)
T ss_pred             EEEEcCCCCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCccccccccccccccccchHHHHHHHhhhee
Confidence            999999976 7899999999999987321      00                   0   11246777888888899999


Q ss_pred             EEeCCCeEEEEECCCC-----------------ceEeeCCccEEEEEEcCC--Cc-EEEEEcCCcEEEEecCCCCcchhH
Q psy7057         175 SGGEDQCVCVYQNKAQ-----------------NSFMIPAMSVWAVAILPN--SD-IVTGSSDGIVRVFSANPDRQAEDA  234 (557)
Q Consensus       175 s~s~Dg~I~iwd~~~~-----------------~~~~~~~~~v~~v~~~p~--g~-l~sg~~Dg~I~iwd~~~~~~~~~~  234 (557)
                      +-|.++.|..|..++.                 .++..+...||-+.|.-|  ++ |+.|...|.|.+||++...+....
T Consensus       266 SkscenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~~~~la~gnq~g~v~vwdL~~~ep~~~t  345 (385)
T KOG1034|consen  266 SKSCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDPWQKMLALGNQSGKVYVWDLDNNEPPKCT  345 (385)
T ss_pred             ecccCceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeecHHHHHHhhccCCCcEEEEECCCCCCccCc
Confidence            9999999999985322                 123334456777776554  45 888999999999999887654222


Q ss_pred             HHh--cccceeEEEeccCCCceeEEEEeCCCcEEEEecC
Q psy7057         235 VQA--QYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSAN  271 (557)
Q Consensus       235 ~~~--~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~  271 (557)
                      .+.  .....|....+. .+...++..++||+|.-|+.-
T Consensus       346 tl~~s~~~~tVRQ~sfS-~dgs~lv~vcdd~~Vwrwdrv  383 (385)
T KOG1034|consen  346 TLTHSKSGSTVRQTSFS-RDGSILVLVCDDGTVWRWDRV  383 (385)
T ss_pred             eEEeccccceeeeeeec-ccCcEEEEEeCCCcEEEEEee
Confidence            211  122233444443 445568899999999999853

>KOG2106|consensus

Probab=99.81  E-value=8.8e-18  Score=167.86  Aligned_cols=265  Identities=17%  Similarity=0.171  Sum_probs=204.9

Q ss_pred             cEEEEEeccCcccEEEEEEcCCCcEEEEECCCcEEEEcCCC---------------------------------------
Q psy7057           2 YKLSTALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPND---------------------------------------   42 (557)
Q Consensus         2 ~kl~~~l~gH~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~---------------------------------------   42 (557)
                      +++.+....|.+.|.+++...+|+|+||+.|..|..||-.-                                       
T Consensus       277 ~~~~k~~~aH~ggv~~L~~lr~GtllSGgKDRki~~Wd~~y~k~r~~elPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~  356 (626)
T KOG2106|consen  277 NRISKQVHAHDGGVFSLCMLRDGTLLSGGKDRKIILWDDNYRKLRETELPEQFGPIRTVAEGKGDILVGTTRNFILQGTL  356 (626)
T ss_pred             ceEEeEeeecCCceEEEEEecCccEeecCccceEEeccccccccccccCchhcCCeeEEecCCCcEEEeeccceEEEeee
Confidence            45566666999999999999999999999999999998321                                       


Q ss_pred             -----------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCCEEEEEECCCeEEEE
Q psy7057          43 -----------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLH  105 (557)
Q Consensus        43 -----------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vw  105 (557)
                                       ++.+|..+.+++++.|+.+++|+  ..+++.+.. -..++.|+.|.|.|.++.|+..|...+.
T Consensus       357 ~~~f~~~v~gh~delwgla~hps~~q~~T~gqdk~v~lW~--~~k~~wt~~-~~d~~~~~~fhpsg~va~Gt~~G~w~V~  433 (626)
T KOG2106|consen  357 ENGFTLTVQGHGDELWGLATHPSKNQLLTCGQDKHVRLWN--DHKLEWTKI-IEDPAECADFHPSGVVAVGTATGRWFVL  433 (626)
T ss_pred             cCCceEEEEecccceeeEEcCCChhheeeccCcceEEEcc--CCceeEEEE-ecCceeEeeccCcceEEEeeccceEEEE
Confidence                             66777889999999999999999  445555544 4678889999999999999999999999


Q ss_pred             eCCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEEEEECCCC-eEEEEE-eCCCCcEEEEEE--cCCEEEEEeCCC
Q psy7057         106 SEEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTG-KCVHTM-YGHPNFIYSVAA--HGDLITSGGEDQ  180 (557)
Q Consensus       106 d~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~-~~~~~~-~~h~~~V~~l~~--~~~~l~s~s~Dg  180 (557)
                      |.+...+.++.....+++++.++|+|. |+.||.|+.|.||.+... ...... +.|..+|..+.|  ++++|.+-+-|-
T Consensus       434 d~e~~~lv~~~~d~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~r~~k~~gs~ithLDwS~Ds~~~~~~S~d~  513 (626)
T KOG2106|consen  434 DTETQDLVTIHTDNEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKYSRVGKCSGSPITHLDWSSDSQFLVSNSGDY  513 (626)
T ss_pred             ecccceeEEEEecCCceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEEEEeeeecCceeEEeeecCCCceEEeccCce
Confidence            966666555555588999999999987 669999999999988653 322222 234589999999  788999999999


Q ss_pred             eEEEEECCCCceEe---------------------eCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCc-chhHHHh
Q psy7057         181 CVCVYQNKAQNSFM---------------------IPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQ-AEDAVQA  237 (557)
Q Consensus       181 ~I~iwd~~~~~~~~---------------------~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~-~~~~~~~  237 (557)
                      .|..|....+....                     .+..-|..++.+.+.+ +++|...|+|++|...-.+. +......
T Consensus       514 eiLyW~~~~~~~~ts~kDvkW~t~~c~lGF~v~g~s~~t~i~a~~rs~~~~~lA~gdd~g~v~lf~yPc~s~rA~~he~~  593 (626)
T KOG2106|consen  514 EILYWKPSECKQITSVKDVKWATYTCTLGFEVFGGSDGTDINAVARSHCEKLLASGDDFGKVHLFSYPCSSPRAPSHEYG  593 (626)
T ss_pred             EEEEEccccCcccceecceeeeeeEEEEEEEEecccCCchHHHhhhhhhhhhhhccccCceEEEEccccCCCcccceeec
Confidence            99999644331111                     1222345556666667 67788889999998653332 2345566


Q ss_pred             cccceeEEEeccCCCceeEEEEeCCCcEEEEec
Q psy7057         238 QYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSA  270 (557)
Q Consensus       238 ~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~  270 (557)
                      .|...++.+.+...+...+-++ .|.+|..|.+
T Consensus       594 ghs~~vt~V~Fl~~d~~li~tg-~D~Si~qW~l  625 (626)
T KOG2106|consen  594 GHSSHVTNVAFLCKDSHLISTG-KDTSIMQWRL  625 (626)
T ss_pred             cccceeEEEEEeeCCceEEecC-CCceEEEEEe
Confidence            7888899999988887644444 9999999986

>KOG0646|consensus

Probab=99.81  E-value=2.2e-18  Score=171.08  Aligned_cols=243  Identities=17%  Similarity=0.205  Sum_probs=183.3

Q ss_pred             CcEEEEcCCC----CCCCC------------CCCEEEEEECC-CeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEE
Q psy7057          33 KSAKLWKPND----LSPGA------------KVNTLLSASWD-MTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIV   94 (557)
Q Consensus        33 g~V~iWd~~~----~~~~~------------~~~~l~sgs~D-g~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~   94 (557)
                      .++.+||+.+    +.+.+            .+.+++++... ..+.+|.+..........--.++|.|++-+|.| +++
T Consensus        18 ~~~~~~dl~TGt~~~~ykg~~~a~~~sl~~l~~~yllsaq~~rp~l~vw~i~k~~~~~q~~v~Pg~v~al~s~n~G~~l~   97 (476)
T KOG0646|consen   18 INCIVWDLRTGTSLLQYKGSYLAQAASLTALNNEYLLSAQLKRPLLHVWEILKKDQVVQYIVLPGPVHALASSNLGYFLL   97 (476)
T ss_pred             cceeEEecCCCceeEEecCcccccchhhhhhchhheeeecccCccccccccCchhhhhhhcccccceeeeecCCCceEEE
Confidence            3488888887    11111            13466666543 568899886654443222346789999999999 555


Q ss_pred             EEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEEEEECC---------CCeEEEEEeCCCCcE
Q psy7057          95 TGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVWDST---------TGKCVHTMYGHPNFI  163 (557)
Q Consensus        95 sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~---------~~~~~~~~~~h~~~V  163 (557)
                      .|+..+.|++|. .+|..+..+.+|-..|+|+.|+.++. |+|||.||.|.+|++.         +-++++.|..|+-+|
T Consensus        98 ag~i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsI  177 (476)
T KOG0646|consen   98 AGTISGNLYLWELSSGILLNVLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSI  177 (476)
T ss_pred             eecccCcEEEEEeccccHHHHHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEEeecccccCCCccceeeeccCccee
Confidence            555999999999 67888899999999999999999977 7799999999999863         346888999999999


Q ss_pred             EEEEE-cC---CEEEEEeCCCeEEEEECCCCceE--eeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCc------
Q psy7057         164 YSVAA-HG---DLITSGGEDQCVCVYQNKAQNSF--MIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQ------  230 (557)
Q Consensus       164 ~~l~~-~~---~~l~s~s~Dg~I~iwd~~~~~~~--~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~------  230 (557)
                      +++.. .|   .+|+|+|.|.++++||+.....+  ......+.++++.|.++ +.+|+++|.|.+.++..-..      
T Consensus       178 TDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~fp~si~av~lDpae~~~yiGt~~G~I~~~~~~~~~~~~~~v~  257 (476)
T KOG0646|consen  178 TDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTITFPSSIKAVALDPAERVVYIGTEEGKIFQNLLFKLSGQSAGVN  257 (476)
T ss_pred             EEEEecCCCccceEEEecCCceEEEEEeccceeeEEEecCCcceeEEEcccccEEEecCCcceEEeeehhcCCccccccc
Confidence            99998 33   48999999999999998766333  23456899999999988 88999999999988654321      


Q ss_pred             --------chhHHHhcccc--eeEEEeccCCCceeEEEEeCCCcEEEEecCCChhh
Q psy7057         231 --------AEDAVQAQYAE--EVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQA  276 (557)
Q Consensus       231 --------~~~~~~~~~~~--~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~~~~  276 (557)
                              .......++.+  .|+++...- +...+++|+.||+|+||++...+.+
T Consensus       258 ~k~~~~~~t~~~~~~Gh~~~~~ITcLais~-DgtlLlSGd~dg~VcvWdi~S~Q~i  312 (476)
T KOG0646|consen  258 QKGRHEENTQINVLVGHENESAITCLAIST-DGTLLLSGDEDGKVCVWDIYSKQCI  312 (476)
T ss_pred             ccccccccceeeeeccccCCcceeEEEEec-CccEEEeeCCCCCEEEEecchHHHH
Confidence                    01122334555  677776544 4456899999999999999876554

>KOG0270|consensus

Probab=99.80  E-value=3.9e-18  Score=168.37  Aligned_cols=205  Identities=20%  Similarity=0.252  Sum_probs=163.5

Q ss_pred             EEEEECCCcEEEEcCCC-------------------------------------CCCC-CCCCEEEEEECCCeEEEEECC
Q psy7057          26 ILSASRDKSAKLWKPND-------------------------------------LSPG-AKVNTLLSASWDMTAKLWCLE   67 (557)
Q Consensus        26 l~sgs~Dg~V~iWd~~~-------------------------------------~~~~-~~~~~l~sgs~Dg~i~iwd~~   67 (557)
                      +|.|+.|..|.|||+.-                                     ++++ ...+.|+|||.|.+|++||+.
T Consensus       195 vAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~lWD~~  274 (463)
T KOG0270|consen  195 VAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFRNVLASGSADKTVKLWDVD  274 (463)
T ss_pred             EEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhccccceeEEecCCCceEEEEEcC
Confidence            78999999999999864                                     1111 124679999999999999999


Q ss_pred             CCeEEEEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEeCC-CcEEEEEeCCCCCEEEEEEeCCCe--EEEEECCCeE
Q psy7057          68 SQQCKLTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHSEE-GEFLKTLTGHTDCVRGLAVLNDTD--FVSCSNDASI  142 (557)
Q Consensus        68 ~~~~~~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~~-~~~~~~l~~h~~~V~~l~~~~~~~--lvs~s~Dg~I  142 (557)
                      ++++..++..|...|.++.|+|..  .|++||.|+++.+.|.+ .......-...+.|-.++|.|...  |+++..||++
T Consensus       275 ~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk~~g~VEkv~w~~~se~~f~~~tddG~v  354 (463)
T KOG0270|consen  275 TGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWKFDGEVEKVAWDPHSENSFFVSTDDGTV  354 (463)
T ss_pred             CCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceEEeccceEEEEecCCCceeEEEecCCceE
Confidence            999999999999999999999966  99999999999999943 222211122456788999988743  7899999999


Q ss_pred             EEEECCCC-eEEEEEeCCCCcEEEEEE---cCCEEEEEeCCCeEEEEECCCC--ceEeeCC---ccEEEEEEcCCCc--E
Q psy7057         143 RVWDSTTG-KCVHTMYGHPNFIYSVAA---HGDLITSGGEDQCVCVYQNKAQ--NSFMIPA---MSVWAVAILPNSD--I  211 (557)
Q Consensus       143 ~vwd~~~~-~~~~~~~~h~~~V~~l~~---~~~~l~s~s~Dg~I~iwd~~~~--~~~~~~~---~~v~~v~~~p~g~--l  211 (557)
                      +-+|+|.. +++.+++.|.+.|.+|++   .+.++++++.|+.+++|++...  .....|.   +...|.++.|+-.  +
T Consensus       355 ~~~D~R~~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~~~~v~~~~~~~~rl~c~~~~~~~a~~l  434 (463)
T KOG0270|consen  355 YYFDIRNPGKPVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDSPKSVKEHSFKLGRLHCFALDPDVAFTL  434 (463)
T ss_pred             EeeecCCCCCceeEEEeccCCcceEEecCCCCcceeeccccceEEEEeecCCCCcccccccccccceeecccCCCcceEE
Confidence            99999975 899999999999999999   4568999999999999995432  2222222   2345666677655  8


Q ss_pred             EEEEcCCcEEEEecCCCCc
Q psy7057         212 VTGSSDGIVRVFSANPDRQ  230 (557)
Q Consensus       212 ~sg~~Dg~I~iwd~~~~~~  230 (557)
                      +.|+..+.+||||+.+...
T Consensus       435 a~GG~k~~~~vwd~~~~~~  453 (463)
T KOG0270|consen  435 AFGGEKAVLRVWDIFTNSP  453 (463)
T ss_pred             EecCccceEEEeecccChh
Confidence            8999999999999987654

>KOG0269|consensus

Probab=99.80  E-value=4.3e-19  Score=185.27  Aligned_cols=210  Identities=21%  Similarity=0.213  Sum_probs=170.6

Q ss_pred             EEEEEEcCCCc--EEEEECCCcEEEEcCCC-------------------CCCCC-CCCEEEEEECCCeEEEEECCCCeEE
Q psy7057          15 VRSLSVTPDGC--ILSASRDKSAKLWKPND-------------------LSPGA-KVNTLLSASWDMTAKLWCLESQQCK   72 (557)
Q Consensus        15 V~~l~~spdg~--l~sgs~Dg~V~iWd~~~-------------------~~~~~-~~~~l~sgs~Dg~i~iwd~~~~~~~   72 (557)
                      +..|+|..-..  |+|++..|.|.+||+..                   +.+++ ..++|++||.||+|++||++..+..
T Consensus        90 ~~DVkW~~~~~NlIAT~s~nG~i~vWdlnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~  169 (839)
T KOG0269|consen   90 AADVKWGQLYSNLIATCSTNGVISVWDLNKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSK  169 (839)
T ss_pred             hhhcccccchhhhheeecCCCcEEEEecCccccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeeccccc
Confidence            44567774322  88999999999999976                   33332 4678999999999999999999888


Q ss_pred             EEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEeC--CCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEEEEEC
Q psy7057          73 LTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHSE--EGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVWDS  147 (557)
Q Consensus        73 ~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~--~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~  147 (557)
                      .++.+....|..+.|+|.-  .++++...|.+++||+  ..++...+..|.++|.|+.|+|++. |+||+.|++|+|||+
T Consensus       170 ~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~  249 (839)
T KOG0269|consen  170 STFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDM  249 (839)
T ss_pred             ccccccchhhhceeeccCCCceEEEecCCceEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeecCCCccEEEEec
Confidence            9999999999999999943  9999999999999994  4466778889999999999999866 679999999999999


Q ss_pred             CCCeE--EEEEeCCCCcEEEEEEc---CCEEEEEe--CCCeEEEEECCCC----ceEeeCCccEEEEEEcCCCc--EEEE
Q psy7057         148 TTGKC--VHTMYGHPNFIYSVAAH---GDLITSGG--EDQCVCVYQNKAQ----NSFMIPAMSVWAVAILPNSD--IVTG  214 (557)
Q Consensus       148 ~~~~~--~~~~~~h~~~V~~l~~~---~~~l~s~s--~Dg~I~iwd~~~~----~~~~~~~~~v~~v~~~p~g~--l~sg  214 (557)
                      .+.+.  +.++. ...+|.+|.|.   ...|++|+  .|..|+|||++..    ..+..|...+..++|-....  +.++
T Consensus       250 t~~~~~~~~tIn-Tiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRPYIP~~t~~eH~~~vt~i~W~~~d~~~l~s~  328 (839)
T KOG0269|consen  250 TDSRAKPKHTIN-TIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRRPYIPYATFLEHTDSVTGIAWDSGDRINLWSC  328 (839)
T ss_pred             cCCCccceeEEe-ecceeeeeeeccCccchhhhhhccccceEEEEeeccccccceeeeccCccccceeccCCCceeeEee
Confidence            86553  33333 35788999993   34688776  5789999998766    77888999999999977333  7899


Q ss_pred             EcCCcEEEEec
Q psy7057         215 SSDGIVRVFSA  225 (557)
Q Consensus       215 ~~Dg~I~iwd~  225 (557)
                      +.||+|..-.+
T Consensus       329 sKD~tv~qh~~  339 (839)
T KOG0269|consen  329 SKDGTVLQHLF  339 (839)
T ss_pred             cCccHHHHhhh
Confidence            99998765433

>PF09070 PFU: PFU (PLAA family ubiquitin binding); InterPro: IPR015155 The PFU (for PLAA family ubiquitin binding domain) is an ubiquitin binding domain with no homology to several known ubiquitin binding domains (e

Probab=99.80  E-value=4.5e-20  Score=153.55  Aligned_cols=66  Identities=58%  Similarity=1.061  Sum_probs=55.9

Q ss_pred             eeEecceeeeeEEEEecCCCCCcccCCCccCCChHHHHHHHHHHcCCChHHHHHHHHHHHhcCCCC
Q psy7057         363 KVLYQGKEYDFVFSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHLSQMFLEQVANFIMTNSKSK  428 (557)
Q Consensus       363 ~~~~~g~~~d~v~~v~~~~g~~~~~l~~n~~~~~~~~a~~~~~~~~l~~~~~~~v~~~i~~~~~~~  428 (557)
                      +.+++|++|||||+||+++|.+++|||||+++|||.+|++||.+|+||++|++||++||.+|+++.
T Consensus        48 k~~~~Gk~YDyVf~Vdi~dg~~~lkLpyN~~dnP~~aAq~Fi~~n~Lp~~yl~qI~~FI~~N~~~~  113 (116)
T PF09070_consen   48 KKYYEGKEYDYVFDVDIEDGGPPLKLPYNKGDNPYEAAQKFIERNNLPQSYLDQIANFIIQNTKGA  113 (116)
T ss_dssp             SEEETTEEESEEEEE--STTSS-EEEEE-TTS-HHHHHHHHHHHHT--CCHHHHHHHHHHHHHSTT
T ss_pred             cccccCccceEEEEEEecCCCcceeCCccCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHcCCCc
Confidence            467899999999999999999999999999999999999999999999999999999999998753

g., UIM, NZF, UBA, UEV, UBP, or CUE domains). The PFU domain appears to be unique to the PLAA family of proteins. A single member of this family of proteins exists in every eukaryotic species examined. Each of these homologues possesses identical domain structure: an N-terminal domain containing seven WD40 repeats, a central PFU domain, and a C-terminal PUL domain, which directly binds to Cdc48, a member of the AAA-ATPase family of molecular chaperone []. In addition to ubiquitin, the PFU domain of DOA1 has been shown to bind to the SH3 domain []. Secondary structure predictions of the PFU domain suggest the presence of an extensive length of beta-sheet, N-terminal to an alpha-helical region []. Some proteins known to contain a PFU domain include: Saccharomyces cerevisiae DOA1 (UFD3, ZZZ4), involved in the ubiquitin conjugation pathway. DOA1 participates in the regulation of the ubiquitin conjugation pathway involving CDC48 by hindering multiubiquitination of substrates at the CDC48 chaperone. Schizosaccharomyces pombe ubiquitin homeostasis protein Lub1, acts as a negative regulator of vacuole-dependent ubiquitin degradation. Mammalian phospholipase A-2-activating protein (PLA2P, PLAA), the homologue of DOA1. PLA2P plays an important role in the regulation of specific inflammatory disease processes. ; PDB: 2K8B_B 2K8A_A 2K8C_B 2K89_A 3L3F_X 3PST_A 3PSP_A.

>KOG0267|consensus

Probab=99.79  E-value=1.1e-19  Score=188.25  Aligned_cols=206  Identities=23%  Similarity=0.405  Sum_probs=179.4

Q ss_pred             EEEEECCCcEEEEcCCCC----------CCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEE
Q psy7057          26 ILSASRDKSAKLWKPNDL----------SPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIV   94 (557)
Q Consensus        26 l~sgs~Dg~V~iWd~~~~----------~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~   94 (557)
                      +.....+-.+++|+.+.+          ........+++|++|..+-+|.+.....+..|.+|..+|.|+.|.+.. +|+
T Consensus         7 ~m~~~~~t~Lr~~~~~~~~~hsaav~~lk~~~s~r~~~~Gg~~~k~~L~~i~kp~~i~S~~~hespIeSl~f~~~E~Lla   86 (825)
T KOG0267|consen    7 LMKTKRATKLRVWDTREFVAHSAAVGCLKIRKSSRSLVTGGEDEKVNLWAIGKPNAITSLTGHESPIESLTFDTSERLLA   86 (825)
T ss_pred             cceeeeeeccccccchhhhhhhhhhceeeeeccceeeccCCCceeeccccccCCchhheeeccCCcceeeecCcchhhhc
Confidence            345556667788888762          222345789999999999999998888888899999999999999977 999


Q ss_pred             EEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cC
Q psy7057          95 TGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HG  170 (557)
Q Consensus        95 sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~  170 (557)
                      +|+.+|+|++|| .+++.+++|.+|...+.++.|+|-+. +++|+.|+.+++||++..-|.+.+.+|...|.++.+  +|
T Consensus        87 agsasgtiK~wDleeAk~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~~~vv~~l~lsP~G  166 (825)
T KOG0267|consen   87 AGSASGTIKVWDLEEAKIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTYKSHTRVVDVLRLSPDG  166 (825)
T ss_pred             ccccCCceeeeehhhhhhhhhhhccccCcceeeeccceEEeccccccccceehhhhccCceeeecCCcceeEEEeecCCC
Confidence            999999999999 57788899999999999999999987 558999999999999988899999999999999998  78


Q ss_pred             CEEEEEeCCCeEEEEECCCC---ceEeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcc
Q psy7057         171 DLITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQA  231 (557)
Q Consensus       171 ~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~  231 (557)
                      .+++++++|.+++|||+...   ..+..|...+.++.|+|..- +++|+.|+++++||+++....
T Consensus       167 r~v~~g~ed~tvki~d~~agk~~~ef~~~e~~v~sle~hp~e~Lla~Gs~d~tv~f~dletfe~I  231 (825)
T KOG0267|consen  167 RWVASGGEDNTVKIWDLTAGKLSKEFKSHEGKVQSLEFHPLEVLLAPGSSDRTVRFWDLETFEVI  231 (825)
T ss_pred             ceeeccCCcceeeeecccccccccccccccccccccccCchhhhhccCCCCceeeeeccceeEEe
Confidence            89999999999999997655   66688889999999999887 779999999999999865443

>KOG0639|consensus

Probab=99.79  E-value=2e-18  Score=172.12  Aligned_cols=212  Identities=19%  Similarity=0.262  Sum_probs=180.5

Q ss_pred             cccEEEEEEcCCCc-EEEEECCCcEEEEcCCC------------------CCCCCCCCEEEEEECCCeEEEEECCCCeEE
Q psy7057          12 SMDVRSLSVTPDGC-ILSASRDKSAKLWKPND------------------LSPGAKVNTLLSASWDMTAKLWCLESQQCK   72 (557)
Q Consensus        12 ~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~------------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~   72 (557)
                      .+-|+++.++|||+ |++|+.-.++.|||+..                  ++.+++.+..++++.||.|+|||+.+...+
T Consensus       465 dnyiRSckL~pdgrtLivGGeastlsiWDLAapTprikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~~V  544 (705)
T KOG0639|consen  465 DNYIRSCKLLPDGRTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLV  544 (705)
T ss_pred             ccceeeeEecCCCceEEeccccceeeeeeccCCCcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccceee
Confidence            46789999999999 99999999999999976                  778889999999999999999999999999


Q ss_pred             EEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeC-CCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEEEEECCC
Q psy7057          73 LTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSE-EGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVWDSTT  149 (557)
Q Consensus        73 ~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~-~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~  149 (557)
                      +.|++|.+.+.||..+++| .|.||+-|+++|.||+ +++.+... ...+.|.++..+|.+. ++.|=..+.+-|... +
T Consensus       545 rqfqGhtDGascIdis~dGtklWTGGlDntvRcWDlregrqlqqh-dF~SQIfSLg~cP~~dWlavGMens~vevlh~-s  622 (705)
T KOG0639|consen  545 RQFQGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLREGRQLQQH-DFSSQIFSLGYCPTGDWLAVGMENSNVEVLHT-S  622 (705)
T ss_pred             ecccCCCCCceeEEecCCCceeecCCCccceeehhhhhhhhhhhh-hhhhhheecccCCCccceeeecccCcEEEEec-C
Confidence            9999999999999999999 9999999999999994 44433222 2457799999999988 557778888888874 3


Q ss_pred             CeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC-ceEee-CCccEEEEEEcCCCc-EEEEEcCCcEEEEe
Q psy7057         150 GKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ-NSFMI-PAMSVWAVAILPNSD-IVTGSSDGIVRVFS  224 (557)
Q Consensus       150 ~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~-~~~~~-~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd  224 (557)
                      +.....+.-|...|.++.|  .|+++++.+.|..+..|.+.-. ..+.. ..++|.++.++.+.+ |++|+.|....||.
T Consensus       623 kp~kyqlhlheScVLSlKFa~cGkwfvStGkDnlLnawrtPyGasiFqskE~SsVlsCDIS~ddkyIVTGSGdkkATVYe  702 (705)
T KOG0639|consen  623 KPEKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISFDDKYIVTGSGDKKATVYE  702 (705)
T ss_pred             CccceeecccccEEEEEEecccCceeeecCchhhhhhccCccccceeeccccCcceeeeeccCceEEEecCCCcceEEEE
Confidence            5555667779999999999  8999999999999999997655 33333 345899999999998 88999998888886


Q ss_pred             c
Q psy7057         225 A  225 (557)
Q Consensus       225 ~  225 (557)
                      +
T Consensus       703 V  703 (705)
T KOG0639|consen  703 V  703 (705)
T ss_pred             E
Confidence            5

>KOG2055|consensus

Probab=99.79  E-value=1.1e-17  Score=165.72  Aligned_cols=258  Identities=10%  Similarity=0.178  Sum_probs=200.4

Q ss_pred             cccEEEEEEcCCCc-EEEEECCCcEEEEcCCC------------------CCCCCCCC-EEEEEECCCeEEEEECCCCeE
Q psy7057          12 SMDVRSLSVTPDGC-ILSASRDKSAKLWKPND------------------LSPGAKVN-TLLSASWDMTAKLWCLESQQC   71 (557)
Q Consensus        12 ~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~------------------~~~~~~~~-~l~sgs~Dg~i~iwd~~~~~~   71 (557)
                      .+.|++|.|+|... |++|+.|++++||.+..                  ..+.++|. .+++++...-+..||+.+.+.
T Consensus       213 ~~~I~sv~FHp~~plllvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak~  292 (514)
T KOG2055|consen  213 HGGITSVQFHPTAPLLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAKV  292 (514)
T ss_pred             cCCceEEEecCCCceEEEecCCCcEEEEEecCccChhheeeeeccCccceeeecCCCceEEEecccceEEEEeecccccc
Confidence            47899999999988 78999999999998875                  45667788 899999999999999988764


Q ss_pred             E--EEEcccC-CcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEEEE
Q psy7057          72 K--LTIRQHE-MAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVW  145 (557)
Q Consensus        72 ~--~~l~~h~-~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vw  145 (557)
                      .  ..+.++. ..+.....++++ .|+..+..|.|.+.. .+++.+.+++ -.+.|..++|+.+++ +++++.+|.|.+|
T Consensus       293 ~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli~s~K-ieG~v~~~~fsSdsk~l~~~~~~GeV~v~  371 (514)
T KOG2055|consen  293 TKLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELITSFK-IEGVVSDFTFSSDSKELLASGGTGEVYVW  371 (514)
T ss_pred             ccccCCCCcccchhheeEecCCCCeEEEcccCceEEeehhhhhhhhheee-eccEEeeEEEecCCcEEEEEcCCceEEEE
Confidence            3  3344443 456667778887 999999999999987 6677777776 567899999998877 6788889999999


Q ss_pred             ECCCCeEEEEEeCCC---CcEEEEEEcCCEEEEEeCCCeEEEEECCCC---------ceEeeCCccEEEEEEcCCCc-EE
Q psy7057         146 DSTTGKCVHTMYGHP---NFIYSVAAHGDLITSGGEDQCVCVYQNKAQ---------NSFMIPAMSVWAVAILPNSD-IV  212 (557)
Q Consensus       146 d~~~~~~~~~~~~h~---~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~~---------~~~~~~~~~v~~v~~~p~g~-l~  212 (557)
                      |++..++++.+....   +.-.|++.++.+|++||..|.|.|||..++         ..+......|.++.|+|+++ |+
T Consensus       372 nl~~~~~~~rf~D~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d~qiLA  451 (514)
T KOG2055|consen  372 NLRQNSCLHRFVDDGSVHGTSLCISLNGSYLATGSDSGIVNIYDGNSCFASTNPKPIKTVDNLTTAITSLQFNHDAQILA  451 (514)
T ss_pred             ecCCcceEEEEeecCccceeeeeecCCCceEEeccCcceEEEeccchhhccCCCCchhhhhhhheeeeeeeeCcchhhhh
Confidence            999999999987432   222344458999999999999999996544         23333456899999999999 44


Q ss_pred             --EEEcCCcEEEEecCCCCcchhH-HHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecC
Q psy7057         213 --TGSSDGIVRVFSANPDRQAEDA-VQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSAN  271 (557)
Q Consensus       213 --sg~~Dg~I~iwd~~~~~~~~~~-~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~  271 (557)
                        +-..+..+|+-.+.+...-..+ ......+.++++.+.+... .++.|-.+|.+++|.+.
T Consensus       452 iaS~~~knalrLVHvPS~TVFsNfP~~n~~vg~vtc~aFSP~sG-~lAvGNe~grv~l~kL~  512 (514)
T KOG2055|consen  452 IASRVKKNALRLVHVPSCTVFSNFPTSNTKVGHVTCMAFSPNSG-YLAVGNEAGRVHLFKLH  512 (514)
T ss_pred             hhhhccccceEEEeccceeeeccCCCCCCcccceEEEEecCCCc-eEEeecCCCceeeEeec
Confidence              3445788999888765433221 2233456788888888766 47788899999999864

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.79  E-value=1.6e-16  Score=159.38  Aligned_cols=244  Identities=14%  Similarity=0.073  Sum_probs=170.2

Q ss_pred             EEEEECCCcEEEEcCCC---------------CCCCCCCCEE-EEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcC
Q psy7057          26 ILSASRDKSAKLWKPND---------------LSPGAKVNTL-LSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLA   89 (557)
Q Consensus        26 l~sgs~Dg~V~iWd~~~---------------~~~~~~~~~l-~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~   89 (557)
                      +++++.|+.|++||+.+               +.+++++..+ ++++.++.|++||+.+++....+..+.. +..++++|
T Consensus         4 ~~s~~~d~~v~~~d~~t~~~~~~~~~~~~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~~~~   82 (300)
T TIGR03866         4 YVSNEKDNTISVIDTATLEVTRTFPVGQRPRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSGPD-PELFALHP   82 (300)
T ss_pred             EEEecCCCEEEEEECCCCceEEEEECCCCCCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccCCCC-ccEEEECC
Confidence            67889999999999865               5566777766 5677889999999999888777765544 46788999


Q ss_pred             CC-EE-EEEECCCeEEEEeCC-CcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCC-eEEEEECCCCeEEEEEeCCCCcEE
Q psy7057          90 NG-II-VTGCADKTIKLHSEE-GEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDA-SIRVWDSTTGKCVHTMYGHPNFIY  164 (557)
Q Consensus        90 ~~-~l-~sgs~dg~I~vwd~~-~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg-~I~vwd~~~~~~~~~~~~h~~~V~  164 (557)
                      ++ .+ ++++.++.+++||.. ...+..+. +...+.+++++|++. +++++.++ .+.+||..+++.+..+.. .....
T Consensus        83 ~g~~l~~~~~~~~~l~~~d~~~~~~~~~~~-~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~~  160 (300)
T TIGR03866        83 NGKILYIANEDDNLVTVIDIETRKVLAEIP-VGVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEIVDNVLV-DQRPR  160 (300)
T ss_pred             CCCEEEEEcCCCCeEEEEECCCCeEEeEee-CCCCcceEEECCCCCEEEEEecCCCeEEEEeCCCCeEEEEEEc-CCCcc
Confidence            88 44 455678999999954 44555554 334578899999987 45666554 577889988877665542 23445


Q ss_pred             EEEE--cCCEEE-EEeCCCeEEEEECCCCce---EeeCC-------ccEEEEEEcCCCc--EEEEEcCCcEEEEecCCCC
Q psy7057         165 SVAA--HGDLIT-SGGEDQCVCVYQNKAQNS---FMIPA-------MSVWAVAILPNSD--IVTGSSDGIVRVFSANPDR  229 (557)
Q Consensus       165 ~l~~--~~~~l~-s~s~Dg~I~iwd~~~~~~---~~~~~-------~~v~~v~~~p~g~--l~sg~~Dg~I~iwd~~~~~  229 (557)
                      ++++  ++..|+ ++..++.|++||+.+...   +..+.       .....++++|+++  +++.+.++.+.+||..+.+
T Consensus       161 ~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~d~~~~~  240 (300)
T TIGR03866       161 FAEFTADGKELWVSSEIGGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPANRVAVVDAKTYE  240 (300)
T ss_pred             EEEECCCCCEEEEEcCCCCEEEEEEcCcceeeeeeeecccccccccCCccceEECCCCCEEEEEcCCCCeEEEEECCCCc
Confidence            6666  677665 445699999999876532   22111       1234688999998  3445567789999998766


Q ss_pred             cchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCChh
Q psy7057         230 QAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQ  275 (557)
Q Consensus       230 ~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~~~  275 (557)
                      ......   ....+..+.+.+......++.+.+|.|+||++...+.
T Consensus       241 ~~~~~~---~~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~~  283 (300)
T TIGR03866       241 VLDYLL---VGQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAALKV  283 (300)
T ss_pred             EEEEEE---eCCCcceEEECCCCCEEEEEcCCCCeEEEEECCCCcE
Confidence            542221   2234666777776665444456799999999887543

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG1539|consensus

Probab=99.78  E-value=1.7e-17  Score=174.73  Aligned_cols=183  Identities=19%  Similarity=0.206  Sum_probs=154.6

Q ss_pred             CCCCCCCEEEEEECCCeEEEEECCCCeEEEEE---cccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcE-EEEEeCC
Q psy7057          44 SPGAKVNTLLSASWDMTAKLWCLESQQCKLTI---RQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEF-LKTLTGH  118 (557)
Q Consensus        44 ~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l---~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~-~~~l~~h  118 (557)
                      +.++.|++.+.|+..|+|-+|++.+|-...++   ..|..+|+.++...-+ .+++++.+|.+++||...+. +..+. -
T Consensus       455 ~vs~CGNF~~IG~S~G~Id~fNmQSGi~r~sf~~~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~~~l~-l  533 (910)
T KOG1539|consen  455 CVSFCGNFVFIGYSKGTIDRFNMQSGIHRKSFGDSPAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKVLKKSLR-L  533 (910)
T ss_pred             EEeccCceEEEeccCCeEEEEEcccCeeecccccCccccCceeEEEecCCCceEEEccCcceEEEEecCCcceeeeec-c
Confidence            34456888999999999999999999888888   5799999999998766 89999999999999965544 44444 4


Q ss_pred             CCCEEEEEEeCC-CeEEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCCceEe-
Q psy7057         119 TDCVRGLAVLND-TDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQNSFM-  194 (557)
Q Consensus       119 ~~~V~~l~~~~~-~~lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~~~~~-  194 (557)
                      ..++.++..+.. +.++.+..|-.|+++|+.+.+.++.|.+|.+.|++++|  +|++|++++.|++||+||+.+...+. 
T Consensus       534 ~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~lID~  613 (910)
T KOG1539|consen  534 GSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLPTGTLIDG  613 (910)
T ss_pred             CCCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhhccccceeeeEeCCCCcEEEEeecCCcEEEEeccCcceeee
Confidence            556777777765 44778899999999999999999999999999999999  88999999999999999987774443 


Q ss_pred             -eCCccEEEEEEcCCCc-EEEEEcC-CcEEEEecCC
Q psy7057         195 -IPAMSVWAVAILPNSD-IVTGSSD-GIVRVFSANP  227 (557)
Q Consensus       195 -~~~~~v~~v~~~p~g~-l~sg~~D-g~I~iwd~~~  227 (557)
                       ....++.++.|+|+|+ |++...| .-|++|.-.+
T Consensus       614 ~~vd~~~~sls~SPngD~LAT~Hvd~~gIylWsNks  649 (910)
T KOG1539|consen  614 LLVDSPCTSLSFSPNGDFLATVHVDQNGIYLWSNKS  649 (910)
T ss_pred             EecCCcceeeEECCCCCEEEEEEecCceEEEEEchh
Confidence             3466899999999999 8888888 6699997543

>KOG2048|consensus

Probab=99.78  E-value=4.2e-17  Score=168.49  Aligned_cols=226  Identities=18%  Similarity=0.277  Sum_probs=187.7

Q ss_pred             CcEEEEEeccCc-ccEEEEEEcCCCcEEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEE
Q psy7057           1 MYKLSTALYGHS-MDVRSLSVTPDGCILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKL   63 (557)
Q Consensus         1 ~~kl~~~l~gH~-~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~i   63 (557)
                      +|-+..++.||. +.|-+++|++.++|++.+.+|+|.-||+.+                ++.++....++.|+.||.+..
T Consensus        57 ~w~~~~vi~g~~drsIE~L~W~e~~RLFS~g~sg~i~EwDl~~lk~~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~  136 (691)
T KOG2048|consen   57 NWFLEPVIHGPEDRSIESLAWAEGGRLFSSGLSGSITEWDLHTLKQKYNIDSNGGAIWSIAINPENTILAIGCDDGVLYD  136 (691)
T ss_pred             CceeeEEEecCCCCceeeEEEccCCeEEeecCCceEEEEecccCceeEEecCCCcceeEEEeCCccceEEeecCCceEEE
Confidence            356677888875 579999999989999999999999999987                566778899999999998888


Q ss_pred             EECCCCeEE--EEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEE-------Ee-CCCCCEEEEEEeCCC
Q psy7057          64 WCLESQQCK--LTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKT-------LT-GHTDCVRGLAVLNDT  131 (557)
Q Consensus        64 wd~~~~~~~--~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~-------l~-~h~~~V~~l~~~~~~  131 (557)
                      ++...+...  ..|...+++|.++.|.+++ .|++|+.||.|++|| ..+..++.       +. +...-|+++.+..++
T Consensus       137 ~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd~  216 (691)
T KOG2048|consen  137 FSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRDS  216 (691)
T ss_pred             EecCCceEEEEeecccccceEEEEEecCCccEEEecccCceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEeecC
Confidence            888777544  3455567999999999999 699999999999999 44544431       11 134468999999999


Q ss_pred             eEEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC-------ceEeeCCccEEE
Q psy7057         132 DFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ-------NSFMIPAMSVWA  202 (557)
Q Consensus       132 ~lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~-------~~~~~~~~~v~~  202 (557)
                      .+++|...|+|.+||...+..++.+..|.+-|.|++.  +++.+++++.|+.|..|.....       .....|...|++
T Consensus       217 tI~sgDS~G~V~FWd~~~gTLiqS~~~h~adVl~Lav~~~~d~vfsaGvd~~ii~~~~~~~~~~wv~~~~r~~h~hdvrs  296 (691)
T KOG2048|consen  217 TIASGDSAGTVTFWDSIFGTLIQSHSCHDADVLALAVADNEDRVFSAGVDPKIIQYSLTTNKSEWVINSRRDLHAHDVRS  296 (691)
T ss_pred             cEEEecCCceEEEEcccCcchhhhhhhhhcceeEEEEcCCCCeEEEccCCCceEEEEecCCccceeeeccccCCccccee
Confidence            9999999999999999999999999999999999999  5579999999999998885433       234567788999


Q ss_pred             EEEcCCCcEEEEEcCCcEEEEecCC
Q psy7057         203 VAILPNSDIVTGSSDGIVRVFSANP  227 (557)
Q Consensus       203 v~~~p~g~l~sg~~Dg~I~iwd~~~  227 (557)
                      +++.++ .+++|+.|.++.+-....
T Consensus       297 ~av~~~-~l~sgG~d~~l~i~~s~~  320 (691)
T KOG2048|consen  297 MAVIEN-ALISGGRDFTLAICSSRE  320 (691)
T ss_pred             eeeecc-eEEecceeeEEEEccccc
Confidence            999887 588999999888766543

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.77  E-value=3.6e-16  Score=156.84  Aligned_cols=226  Identities=15%  Similarity=0.175  Sum_probs=161.5

Q ss_pred             EEEEEeccCcccEEEEEEcCCCc-E-EEEECCCcEEEEcCCC---------------CCCCCCCCEEEEE-ECCCeEEEE
Q psy7057           3 KLSTALYGHSMDVRSLSVTPDGC-I-LSASRDKSAKLWKPND---------------LSPGAKVNTLLSA-SWDMTAKLW   64 (557)
Q Consensus         3 kl~~~l~gH~~~V~~l~~spdg~-l-~sgs~Dg~V~iWd~~~---------------~~~~~~~~~l~sg-s~Dg~i~iw   64 (557)
                      ++.+.+.+|. .+.+++|+|+++ + ++++.++.|++||..+               +.++++++.++++ +.++.+++|
T Consensus        22 ~~~~~~~~~~-~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~l~~~  100 (300)
T TIGR03866        22 EVTRTFPVGQ-RPRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSGPDPELFALHPNGKILYIANEDDNLVTVI  100 (300)
T ss_pred             ceEEEEECCC-CCCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccCCCCccEEEECCCCCEEEEEcCCCCeEEEE
Confidence            3456676664 467899999997 5 5677899999999875               3456677766554 568999999


Q ss_pred             ECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCC-eEEEEeCC-CcEEEEEeCCCCCEEEEEEeCCCe-EE-EEECC
Q psy7057          65 CLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADK-TIKLHSEE-GEFLKTLTGHTDCVRGLAVLNDTD-FV-SCSND  139 (557)
Q Consensus        65 d~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg-~I~vwd~~-~~~~~~l~~h~~~V~~l~~~~~~~-lv-s~s~D  139 (557)
                      |+.+.+.+..+.. ...+.+++++|++ .+++++.++ .+.+||.. +.....+. ....+.+++|++++. ++ ++..+
T Consensus       101 d~~~~~~~~~~~~-~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~  178 (300)
T TIGR03866       101 DIETRKVLAEIPV-GVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEIVDNVL-VDQRPRFAEFTADGKELWVSSEIG  178 (300)
T ss_pred             ECCCCeEEeEeeC-CCCcceEEECCCCCEEEEEecCCCeEEEEeCCCCeEEEEEE-cCCCccEEEECCCCCEEEEEcCCC
Confidence            9999887777753 3446789999998 777777665 46778844 44444333 334567899999987 43 44568


Q ss_pred             CeEEEEECCCCeEEEEEeCCC-----C--cEEEEEE--cCCEE-EEEeCCCeEEEEECCCCceE--eeCCccEEEEEEcC
Q psy7057         140 ASIRVWDSTTGKCVHTMYGHP-----N--FIYSVAA--HGDLI-TSGGEDQCVCVYQNKAQNSF--MIPAMSVWAVAILP  207 (557)
Q Consensus       140 g~I~vwd~~~~~~~~~~~~h~-----~--~V~~l~~--~~~~l-~s~s~Dg~I~iwd~~~~~~~--~~~~~~v~~v~~~p  207 (557)
                      +.|++||+.+++++..+..+.     .  ....+++  +++.+ ++.+.++.+.+||..+.+..  ..+...+.+++|+|
T Consensus       179 ~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~  258 (300)
T TIGR03866       179 GTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPANRVAVVDAKTYEVLDYLLVGQRVWQLAFTP  258 (300)
T ss_pred             CEEEEEEcCcceeeeeeeecccccccccCCccceEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEEeCCCcceEEECC
Confidence            999999999998877665321     1  1234556  56664 44556778999998766322  23455799999999


Q ss_pred             CCc-EEEE-EcCCcEEEEecCCCCcc
Q psy7057         208 NSD-IVTG-SSDGIVRVFSANPDRQA  231 (557)
Q Consensus       208 ~g~-l~sg-~~Dg~I~iwd~~~~~~~  231 (557)
                      +++ |+++ +.++.|++||+.+.+..
T Consensus       259 ~g~~l~~~~~~~~~i~v~d~~~~~~~  284 (300)
T TIGR03866       259 DEKYLLTTNGVSNDVSVIDVAALKVI  284 (300)
T ss_pred             CCCEEEEEcCCCCeEEEEECCCCcEE
Confidence            998 6554 46899999999987643

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG0650|consensus

Probab=99.76  E-value=1.6e-17  Score=169.14  Aligned_cols=265  Identities=20%  Similarity=0.257  Sum_probs=188.8

Q ss_pred             EEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC---------------CCCCCCC--CEEEEEECC-------
Q psy7057           4 LSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND---------------LSPGAKV--NTLLSASWD-------   58 (557)
Q Consensus         4 l~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~---------------~~~~~~~--~~l~sgs~D-------   58 (557)
                      +...++||++.|+||...|.|. |++|+.||+||||.+.+               ++|+|.+  ..|+++-..       
T Consensus       392 ~~lvyrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~~d~~I~~vaw~P~~~~~vLAvA~~~~~~ivnp  471 (733)
T KOG0650|consen  392 CALVYRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQFDSEIRSVAWNPLSDLCVLAVAVGECVLIVNP  471 (733)
T ss_pred             eeeeEeccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEeecceeEEEEecCCCCceeEEEEecCceEEeCc
Confidence            4456899999999999999998 99999999999999987               3444333  233333222       


Q ss_pred             -------------------------CeEEEEECCCC----eEEEEEcccCCcEEEEEEcCCC-EEEEEECC---CeEEEE
Q psy7057          59 -------------------------MTAKLWCLESQ----QCKLTIRQHEMAVWGVIQLANG-IIVTGCAD---KTIKLH  105 (557)
Q Consensus        59 -------------------------g~i~iwd~~~~----~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~d---g~I~vw  105 (557)
                                               +.+..|.-...    .-++....|...|..+.|+..| +|++...+   ..|.|.
T Consensus       472 ~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~VliH  551 (733)
T KOG0650|consen  472 IFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGNKSVLIH  551 (733)
T ss_pred             cccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCCCcceEEEE
Confidence                                     22334432211    0123334588899999999988 77776654   457777


Q ss_pred             eCCCcE-EEEEeCCCCCEEEEEEeCCCeEEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeE
Q psy7057         106 SEEGEF-LKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCV  182 (557)
Q Consensus       106 d~~~~~-~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I  182 (557)
                      +++... ..-|+...+.|.++.|+|....+..+....|++||+...+.+..+......|.+++.  .|+.|+.++.|+.+
T Consensus       552 QLSK~~sQ~PF~kskG~vq~v~FHPs~p~lfVaTq~~vRiYdL~kqelvKkL~tg~kwiS~msihp~GDnli~gs~d~k~  631 (733)
T KOG0650|consen  552 QLSKRKSQSPFRKSKGLVQRVKFHPSKPYLFVATQRSVRIYDLSKQELVKKLLTGSKWISSMSIHPNGDNLILGSYDKKM  631 (733)
T ss_pred             ecccccccCchhhcCCceeEEEecCCCceEEEEeccceEEEehhHHHHHHHHhcCCeeeeeeeecCCCCeEEEecCCCee
Confidence            754332 233444567799999999865443344578999999887777777766778888888  56899999999999


Q ss_pred             EEEECCCC----ceEeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCC-------CCcchhHHHhcccce----eEEE
Q psy7057         183 CVYQNKAQ----NSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANP-------DRQAEDAVQAQYAEE----VKKL  246 (557)
Q Consensus       183 ~iwd~~~~----~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~-------~~~~~~~~~~~~~~~----v~~l  246 (557)
                      +.||+.-.    +++..|...+++|+|++.-. |++|+.||++.||.-.-       ........+.+|...    +...
T Consensus       632 ~WfDldlsskPyk~lr~H~~avr~Va~H~ryPLfas~sdDgtv~Vfhg~VY~Dl~qnpliVPlK~L~gH~~~~~~gVLd~  711 (733)
T KOG0650|consen  632 CWFDLDLSSKPYKTLRLHEKAVRSVAFHKRYPLFASGSDDGTVIVFHGMVYNDLLQNPLIVPLKRLRGHEKTNDLGVLDT  711 (733)
T ss_pred             EEEEcccCcchhHHhhhhhhhhhhhhhccccceeeeecCCCcEEEEeeeeehhhhcCCceEeeeeccCceeecccceEee
Confidence            99995432    88899999999999999887 77888899999986321       112233334444433    4555


Q ss_pred             eccCCCceeEEEEeCCCcEEEEe
Q psy7057         247 KSANEQEIGGVKVSDDGIVRVFS  269 (557)
Q Consensus       247 ~~~~~~~~~~vs~s~DG~IrvW~  269 (557)
                      .|++..+ .+++++.||+||+|+
T Consensus       712 ~wHP~qp-WLfsAGAd~tirlfT  733 (733)
T KOG0650|consen  712 IWHPRQP-WLFSAGADGTIRLFT  733 (733)
T ss_pred             cccCCCc-eEEecCCCceEEeeC
Confidence            5666655 589999999999995

>KOG4283|consensus

Probab=99.76  E-value=8.1e-17  Score=151.40  Aligned_cols=218  Identities=24%  Similarity=0.370  Sum_probs=165.8

Q ss_pred             ccCcccEEEEEEcCCCc--EEEEECCCcEEEEcCCC-----------------CCCCC-CCCEEEEEECCCeEEEEECCC
Q psy7057           9 YGHSMDVRSLSVTPDGC--ILSASRDKSAKLWKPND-----------------LSPGA-KVNTLLSASWDMTAKLWCLES   68 (557)
Q Consensus         9 ~gH~~~V~~l~~spdg~--l~sgs~Dg~V~iWd~~~-----------------~~~~~-~~~~l~sgs~Dg~i~iwd~~~   68 (557)
                      .+|.-.|.++.|-|-..  +.++|-|.++++||.++                 +++-. ...++++|..|-.|++-|+.+
T Consensus        98 ~~Hky~iss~~WyP~DtGmFtssSFDhtlKVWDtnTlQ~a~~F~me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~S  177 (397)
T KOG4283|consen   98 NGHKYAISSAIWYPIDTGMFTSSSFDHTLKVWDTNTLQEAVDFKMEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIAS  177 (397)
T ss_pred             ccceeeeeeeEEeeecCceeecccccceEEEeecccceeeEEeecCceeehhhcChhhhcceEEEEecCCCcEEEEeccC
Confidence            57888999999999544  77999999999999988                 22221 245788888999999999999


Q ss_pred             CeEEEEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEeC--CCcEEEEE--------------eCCCCCEEEEEEeCC
Q psy7057          69 QQCKLTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHSE--EGEFLKTL--------------TGHTDCVRGLAVLND  130 (557)
Q Consensus        69 ~~~~~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~--~~~~~~~l--------------~~h~~~V~~l~~~~~  130 (557)
                      |.+.++|.+|.+.|.++.|+|..  .|++|+.||.|++||.  ...+...+              ..|.+.|..++|..+
T Consensus       178 Gs~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd  257 (397)
T KOG4283|consen  178 GSFSHTLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSD  257 (397)
T ss_pred             CcceeeeccccCceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeeccc
Confidence            99999999999999999999977  8999999999999993  22343333              346788999999999


Q ss_pred             Ce-EEEEECCCeEEEEECCCCeEEEEEeC---CCC---cEEEE-EEcCCEEEEEeCCCeEEEEECCCC---ceEeeCCcc
Q psy7057         131 TD-FVSCSNDASIRVWDSTTGKCVHTMYG---HPN---FIYSV-AAHGDLITSGGEDQCVCVYQNKAQ---NSFMIPAMS  199 (557)
Q Consensus       131 ~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~---h~~---~V~~l-~~~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~  199 (557)
                      +. +++++.|..+++|+..+|+....-.+   |..   .-..+ +.+...++---.++.+.++.+.+.   +.+..|...
T Consensus       258 ~~~l~~~gtd~r~r~wn~~~G~ntl~~~g~~~~n~~~~~~~~~~~~~s~vfv~~p~~~~lall~~~sgs~ir~l~~h~k~  337 (397)
T KOG4283|consen  258 ARYLASCGTDDRIRVWNMESGRNTLREFGPIIHNQTTSFAVHIQSMDSDVFVLFPNDGSLALLNLLEGSFVRRLSTHLKR  337 (397)
T ss_pred             chhhhhccCccceEEeecccCcccccccccccccccccceEEEeecccceEEEEecCCeEEEEEccCceEEEeeecccce
Confidence            87 77999999999999987753221111   111   00011 113344444445577777776554   556677778


Q ss_pred             EEEEEEcCCCc-EEEEEcCCcEEEEecC
Q psy7057         200 VWAVAILPNSD-IVTGSSDGIVRVFSAN  226 (557)
Q Consensus       200 v~~v~~~p~g~-l~sg~~Dg~I~iwd~~  226 (557)
                      |.|.++-|+-+ ..++..|+.|..|...
T Consensus       338 i~c~~~~~~fq~~~tg~~d~ni~~w~p~  365 (397)
T KOG4283|consen  338 INCAAYRPDFEQCFTGDMNGNIYMWSPA  365 (397)
T ss_pred             eeEEeecCchhhhhccccCCcccccccc
Confidence            89999999877 8899999999999763

>KOG4378|consensus

Probab=99.75  E-value=2.8e-17  Score=163.81  Aligned_cols=237  Identities=16%  Similarity=0.178  Sum_probs=188.6

Q ss_pred             cEEEEEEcCCCcEE--EEECCCcEEEEcCCC------------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEE
Q psy7057          14 DVRSLSVTPDGCIL--SASRDKSAKLWKPND------------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKL   73 (557)
Q Consensus        14 ~V~~l~~spdg~l~--sgs~Dg~V~iWd~~~------------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~   73 (557)
                      .+.+++|+....|+  +.+.|..+++|.-..                  ++......++++|+..+.|+|||++...+.+
T Consensus        36 g~~s~~w~~~n~lvvas~~gdk~~~~~~K~g~~~~Vp~~~k~~gd~~~Cv~~~s~S~y~~sgG~~~~Vkiwdl~~kl~hr  115 (673)
T KOG4378|consen   36 GDFSFNWQRRNFLVVASMAGDKVMRIKEKDGKTPEVPRVRKLTGDNAFCVACASQSLYEISGGQSGCVKIWDLRAKLIHR  115 (673)
T ss_pred             cceeeeccccceEEEeecCCceeEEEecccCCCCccceeeccccchHHHHhhhhcceeeeccCcCceeeehhhHHHHHhh
Confidence            48899999877544  556788999996544                  3333445789999999999999999877888


Q ss_pred             EEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcE-EEEEeC-CCCCEEEEEEeCCCe--EEEEECCCeEEEEECC
Q psy7057          74 TIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEF-LKTLTG-HTDCVRGLAVLNDTD--FVSCSNDASIRVWDST  148 (557)
Q Consensus        74 ~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~-~~~l~~-h~~~V~~l~~~~~~~--lvs~s~Dg~I~vwd~~  148 (557)
                      .+.+|...|+++.++... +|++++..|.|.|....... ...+.. ....|+-+.+++..+  |.+++.+|.|.+||+.
T Consensus       116 ~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~~~sgqsvRll~ys~skr~lL~~asd~G~VtlwDv~  195 (673)
T KOG4378|consen  116 FLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFTIDSGQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQ  195 (673)
T ss_pred             hccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccccceecCCCCeEEEeecccccceeeEeeccCCeEEEEecc
Confidence            899999999999998755 99999999999999854433 333432 245688999999866  4489999999999998


Q ss_pred             CCeEEEEE-eCCCCcEEEEEE---cCCEEEEEeCCCeEEEEECCCC--ceEeeCCccEEEEEEcCCCc-EEEEEcCCcEE
Q psy7057         149 TGKCVHTM-YGHPNFIYSVAA---HGDLITSGGEDQCVCVYQNKAQ--NSFMIPAMSVWAVAILPNSD-IVTGSSDGIVR  221 (557)
Q Consensus       149 ~~~~~~~~-~~h~~~V~~l~~---~~~~l~s~s~Dg~I~iwd~~~~--~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~  221 (557)
                      ...++..+ ..|.++...|+|   +..+|++.+.|+.|.+||.+..  ........+..+|+|.++|. |++|...|.|.
T Consensus       196 g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~~~l~y~~Plstvaf~~~G~~L~aG~s~G~~i  275 (673)
T KOG4378|consen  196 GMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQASTDRLTYSHPLSTVAFSECGTYLCAGNSKGELI  275 (673)
T ss_pred             CCCcccchhhhccCCcCcceecCCccceEEEecccceEEEeecccccccceeeecCCcceeeecCCceEEEeecCCceEE
Confidence            77777665 469999999999   4568999999999999998766  22233456899999999999 88888999999


Q ss_pred             EEecCCCCcchhHHHhcccceeEEEeccCC
Q psy7057         222 VFSANPDRQAEDAVQAQYAEEVKKLKSANE  251 (557)
Q Consensus       222 iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~  251 (557)
                      .||++..+. +......|...|+++.|.+.
T Consensus       276 ~YD~R~~k~-Pv~v~sah~~sVt~vafq~s  304 (673)
T KOG4378|consen  276 AYDMRSTKA-PVAVRSAHDASVTRVAFQPS  304 (673)
T ss_pred             EEecccCCC-CceEeeecccceeEEEeeec
Confidence            999986543 34556677788888887654

>KOG1445|consensus

Probab=99.75  E-value=2.7e-17  Score=168.00  Aligned_cols=111  Identities=19%  Similarity=0.275  Sum_probs=93.6

Q ss_pred             CEEEEEEeCC--CeEEEEECCCeEEEEECCCC-------eEEEEEeCCCCcEEEEEEc---CCEEEEEeCCCeEEEEECC
Q psy7057         121 CVRGLAVLND--TDFVSCSNDASIRVWDSTTG-------KCVHTMYGHPNFIYSVAAH---GDLITSGGEDQCVCVYQNK  188 (557)
Q Consensus       121 ~V~~l~~~~~--~~lvs~s~Dg~I~vwd~~~~-------~~~~~~~~h~~~V~~l~~~---~~~l~s~s~Dg~I~iwd~~  188 (557)
                      .|+.+.|.|-  .+|+.++.||.|++|.+..+       .+...+..|...|+++.|+   .+.|++++.|-+|++||+.
T Consensus       629 ~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~  708 (1012)
T KOG1445|consen  629 LVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIELWDLA  708 (1012)
T ss_pred             eeeecccCCCChHHeeecccCceEEEEEeccCCCCcccCCcceeeecccceEEEEEecchhhhHhhhhhccceeeeeehh
Confidence            3566666553  45889999999999998653       4566788999999999994   4689999999999999987


Q ss_pred             CC---ceEeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcc
Q psy7057         189 AQ---NSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQA  231 (557)
Q Consensus       189 ~~---~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~  231 (557)
                      ..   ..+.+|.+.|..++|+|+|+ +++.|.||+||+|.-+.....
T Consensus       709 ~~~~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy~Prs~e~p  755 (1012)
T KOG1445|consen  709 NAKLYSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLRVYEPRSREQP  755 (1012)
T ss_pred             hhhhhheeccCcCceeEEEECCCCcceeeeecCceEEEeCCCCCCCc
Confidence            66   78899999999999999999 999999999999998765543

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=99.74  E-value=3.7e-15  Score=154.09  Aligned_cols=267  Identities=32%  Similarity=0.495  Sum_probs=205.8

Q ss_pred             EeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC------------------CCC-CCCCC-EEEEEEC-CCeEEEE
Q psy7057           7 ALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND------------------LSP-GAKVN-TLLSASW-DMTAKLW   64 (557)
Q Consensus         7 ~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~------------------~~~-~~~~~-~l~sgs~-Dg~i~iw   64 (557)
                      .+.+|...|.++.+.+.+. ++.++.|+.+.+|+...                  +.. .+++. .++..+. |+.+.+|
T Consensus        60 ~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~  139 (466)
T COG2319          60 LLRGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSPDGNSILLASSSLDGTVKLW  139 (466)
T ss_pred             eeeeccceEEEEEECCCCcEEEEecCCCcEEEEEcCCCceeEEEEeccCCCceeeEEEECCCcceEEeccCCCCccEEEE
Confidence            4678999999999999998 77788899999999765                  111 34444 4444444 9999999


Q ss_pred             ECCC-CeEEEEEcccCCcEEEEEEcCCC-EEEEEEC-CCeEEEEeCC-CcEEEEEeCCCCCEEEEEEeCCCe-EE-EEEC
Q psy7057          65 CLES-QQCKLTIRQHEMAVWGVIQLANG-IIVTGCA-DKTIKLHSEE-GEFLKTLTGHTDCVRGLAVLNDTD-FV-SCSN  138 (557)
Q Consensus        65 d~~~-~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~-dg~I~vwd~~-~~~~~~l~~h~~~V~~l~~~~~~~-lv-s~s~  138 (557)
                      +... ......+..|...|.+++|+|++ .+++++. |+.+++|+.. +..+..+.+|...|.+++++|++. ++ +++.
T Consensus       140 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~  219 (466)
T COG2319         140 DLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSS  219 (466)
T ss_pred             EecCCCeEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeeccCCCceEEEEEcCCcceEEEEecC
Confidence            9988 78888899999999999999999 7777775 9999999954 578888889999999999998875 44 5599


Q ss_pred             CCeEEEEECCCCeEEE-EEeCCCCcE-EEEEEcCCEEEEEeCCCeEEEEECCCCc----eEeeCCccEEEEEEcCCCc-E
Q psy7057         139 DASIRVWDSTTGKCVH-TMYGHPNFI-YSVAAHGDLITSGGEDQCVCVYQNKAQN----SFMIPAMSVWAVAILPNSD-I  211 (557)
Q Consensus       139 Dg~I~vwd~~~~~~~~-~~~~h~~~V-~~l~~~~~~l~s~s~Dg~I~iwd~~~~~----~~~~~~~~v~~v~~~p~g~-l  211 (557)
                      |+.|++||...+..+. .+.+|.... ..+..++..+++++.|+.+++|+.....    .+..|...+.++.+.|++. +
T Consensus       220 d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~  299 (466)
T COG2319         220 DGTIRLWDLSTGKLLRSTLSGHSDSVVSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLL  299 (466)
T ss_pred             CCcEEEEECCCCcEEeeecCCCCcceeEeECCCCCEEEEecCCCcEEEeeecCCCcEEEEEecCCccEEEEEECCCCCEE
Confidence            9999999998888888 688888774 3233366788899999999999976542    2235678999999999766 7


Q ss_pred             EEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCC-ceeEEEEeCCCcEEEEecCCCh
Q psy7057         212 VTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQ-EIGGVKVSDDGIVRVFSANPDR  274 (557)
Q Consensus       212 ~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~-~~~~vs~s~DG~IrvW~~~~~~  274 (557)
                      ++++.|+.+++|+..............+...+..+.+ ... ....+++..|+.+++|++....
T Consensus       300 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~~~~~~~~~~~~  362 (466)
T COG2319         300 ASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSF-SPDGSLLVSGGSDDGTIRLWDLRTGK  362 (466)
T ss_pred             EEeeCCCcEEEEEcCCCceEEEeeecccCCceEEEEE-CCCCCEEEEeecCCCcEEeeecCCCc
Confidence            7788899999998876654433222234445666666 433 2333444788999999988664

>KOG1273|consensus

Probab=99.74  E-value=9.2e-16  Score=145.62  Aligned_cols=253  Identities=13%  Similarity=0.144  Sum_probs=180.7

Q ss_pred             EEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcc
Q psy7057          15 VRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQ   77 (557)
Q Consensus        15 V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~   77 (557)
                      -.|+.|++.|. |+.|+.||.|.|||+.+                ++|++++..|+++|.|..|.+||+..|.+++.++ 
T Consensus        26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~rir-  104 (405)
T KOG1273|consen   26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRIR-  104 (405)
T ss_pred             cceEEeccCcceeeeeccCCcEEEEEccccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEEE-
Confidence            68999999998 89999999999999987                7899999999999999999999999999988887 


Q ss_pred             cCCcEEEEEEcCCC--EEEEEECCCeEEEEeCCCcEEEEEeCC-----CCCEEEEEEeCCCe-EEEEECCCeEEEEECCC
Q psy7057          78 HEMAVWGVIQLANG--IIVTGCADKTIKLHSEEGEFLKTLTGH-----TDCVRGLAVLNDTD-FVSCSNDASIRVWDSTT  149 (557)
Q Consensus        78 h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~~~~~~~~l~~h-----~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~  149 (557)
                      ...+|+.+.|+|..  ..+..-.+..-.+-+........|...     ...-.+..|.+.|. +++|...|.+.++|..+
T Consensus       105 f~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~a~t  184 (405)
T KOG1273|consen  105 FDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYDAET  184 (405)
T ss_pred             ccCccceeeeccccCCeEEEEEecCCcEEEEecCCceeeccCCCccccccccccccccCCCCEEEEecCcceEEEEecch
Confidence            67899999999954  444444444444444332211222111     11122335667777 66999999999999999


Q ss_pred             CeEEEEEeCCC-CcEEEEEE--cCCEEEEEeCCCeEEEEECCCC------ceEe---e-----CCccEEEEEEcCCCcEE
Q psy7057         150 GKCVHTMYGHP-NFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ------NSFM---I-----PAMSVWAVAILPNSDIV  212 (557)
Q Consensus       150 ~~~~~~~~~h~-~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~------~~~~---~-----~~~~v~~v~~~p~g~l~  212 (557)
                      .+++..++-.+ ..|..+.+  .|+.|+.-+.|+.||.|+.+..      ....   .     ....=.+++|+.+|.++
T Consensus       185 ~e~vas~rits~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~di~~~~r~~e~e~~~K~qDvVNk~~Wk~ccfs~dgeYv  264 (405)
T KOG1273|consen  185 LECVASFRITSVQAIKQIIVSRKGRFLIINTSDRVIRTYEISDIDDEGRDGEVEPEHKLQDVVNKLQWKKCCFSGDGEYV  264 (405)
T ss_pred             heeeeeeeechheeeeEEEEeccCcEEEEecCCceEEEEehhhhcccCccCCcChhHHHHHHHhhhhhhheeecCCccEE
Confidence            99999988655 67777777  8899999999999999996532      1111   0     01123578899999944


Q ss_pred             EEE--cCCcEEEEecCCCCcchhHHHhccc-ceeEEEeccCCCceeEEEEeCCCcEEEEecCC
Q psy7057         213 TGS--SDGIVRVFSANPDRQAEDAVQAQYA-EEVKKLKSANEQEIGGVKVSDDGIVRVFSANP  272 (557)
Q Consensus       213 sg~--~Dg~I~iwd~~~~~~~~~~~~~~~~-~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~  272 (557)
                      +++  .-..++||....+.+....  .+.. +....+.+.+..+. +++. ..|+++||....
T Consensus       265 ~a~s~~aHaLYIWE~~~GsLVKIL--hG~kgE~l~DV~whp~rp~-i~si-~sg~v~iw~~~~  323 (405)
T KOG1273|consen  265 CAGSARAHALYIWEKSIGSLVKIL--HGTKGEELLDVNWHPVRPI-IASI-ASGVVYIWAVVQ  323 (405)
T ss_pred             EeccccceeEEEEecCCcceeeee--cCCchhheeecccccceee-eeec-cCCceEEEEeec
Confidence            433  3567999998887665322  2222 33445555554442 3333 789999998754

>KOG1539|consensus

Probab=99.74  E-value=9.1e-16  Score=161.80  Aligned_cols=272  Identities=16%  Similarity=0.170  Sum_probs=203.3

Q ss_pred             EEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCC-EEEEEECCCeEEEE
Q psy7057           3 KLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVN-TLLSASWDMTAKLW   64 (557)
Q Consensus         3 kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~-~l~sgs~Dg~i~iw   64 (557)
                      |++.+++++...|+++.=+|-=. ++.|..+|+|.|+++..                +++..+|+ .+++|+..|.+.+|
T Consensus       193 K~v~~f~~~~s~IT~ieqsPaLDVVaiG~~~G~ViifNlK~dkil~sFk~d~g~VtslSFrtDG~p~las~~~~G~m~~w  272 (910)
T KOG1539|consen  193 KVVYTFQEFFSRITAIEQSPALDVVAIGLENGTVIIFNLKFDKILMSFKQDWGRVTSLSFRTDGNPLLASGRSNGDMAFW  272 (910)
T ss_pred             cEEEEecccccceeEeccCCcceEEEEeccCceEEEEEcccCcEEEEEEccccceeEEEeccCCCeeEEeccCCceEEEE
Confidence            67889999999999999888655 78999999999999876                55555565 45666777999999


Q ss_pred             ECCCCeEEEEEc-ccCCcEEEEEEcCCC-EEEEEECCCeEEEEeC---CC--cEEEE-----------------------
Q psy7057          65 CLESQQCKLTIR-QHEMAVWGVIQLANG-IIVTGCADKTIKLHSE---EG--EFLKT-----------------------  114 (557)
Q Consensus        65 d~~~~~~~~~l~-~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~---~~--~~~~~-----------------------  114 (557)
                      |++..+.+..++ .|.+.|..+.|.+.. .+++++.|+.+++|-.   +|  +.++.                       
T Consensus       273 DLe~kkl~~v~~nah~~sv~~~~fl~~epVl~ta~~DnSlk~~vfD~~dg~pR~LR~R~GHs~Pp~~irfy~~~g~~ils  352 (910)
T KOG1539|consen  273 DLEKKKLINVTRNAHYGSVTGATFLPGEPVLVTAGADNSLKVWVFDSGDGVPRLLRSRGGHSAPPSCIRFYGSQGHFILS  352 (910)
T ss_pred             EcCCCeeeeeeeccccCCcccceecCCCceEeeccCCCceeEEEeeCCCCcchheeeccCCCCCchheeeeccCcEEEEe
Confidence            998876555444 565666666666655 5666666666555521   00  00000                       


Q ss_pred             --------------------------------------------------------------------------------
Q psy7057         115 --------------------------------------------------------------------------------  114 (557)
Q Consensus       115 --------------------------------------------------------------------------------  114 (557)
                                                                                                      
T Consensus       353 a~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~RE~~W~Nv~~~h~~~~~~~tW~~~n~  432 (910)
T KOG1539|consen  353 AKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEFAFENAREKEWDNVITAHKGKRSAYTWNFRNK  432 (910)
T ss_pred             cccCcchhhhhhhHHHHhHhhcccccccccccccccchhhhcCCcceeeecccchhhhhcceeEEecCcceEEEEeccCc
Confidence                                                                                            


Q ss_pred             -----EeCCC------CCEEEEEEeCCCeEE-EEECCCeEEEEECCCCeEEEEE---eCCCCcEEEEEEcC--CEEEEEe
Q psy7057         115 -----LTGHT------DCVRGLAVLNDTDFV-SCSNDASIRVWDSTTGKCVHTM---YGHPNFIYSVAAHG--DLITSGG  177 (557)
Q Consensus       115 -----l~~h~------~~V~~l~~~~~~~lv-s~s~Dg~I~vwd~~~~~~~~~~---~~h~~~V~~l~~~~--~~l~s~s  177 (557)
                           .-.+.      ..+++++.++.|.|+ .|+..|+|-++++++|-...++   ..|..+|+.++.|+  +.+++++
T Consensus       433 ~~G~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~S~G~Id~fNmQSGi~r~sf~~~~ah~~~V~gla~D~~n~~~vsa~  512 (910)
T KOG1539|consen  433 TSGRHVLDPKRFKKDDINATAVCVSFCGNFVFIGYSKGTIDRFNMQSGIHRKSFGDSPAHKGEVTGLAVDGTNRLLVSAG  512 (910)
T ss_pred             ccccEEecCccccccCcceEEEEEeccCceEEEeccCCeEEEEEcccCeeecccccCccccCceeEEEecCCCceEEEcc
Confidence                 00112      457888888888866 7788899999999999888888   47999999999965  4699999


Q ss_pred             CCCeEEEEECCCCceE--eeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCce
Q psy7057         178 EDQCVCVYQNKAQNSF--MIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEI  254 (557)
Q Consensus       178 ~Dg~I~iwd~~~~~~~--~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~  254 (557)
                      .+|.+.+||.++...+  .....++.++..+.... ++.++.|-.|+++|..+.+..  ....+|...++.+.+.++.. 
T Consensus       513 ~~Gilkfw~f~~k~l~~~l~l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvv--R~f~gh~nritd~~FS~Dgr-  589 (910)
T KOG1539|consen  513 ADGILKFWDFKKKVLKKSLRLGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVV--REFWGHGNRITDMTFSPDGR-  589 (910)
T ss_pred             CcceEEEEecCCcceeeeeccCCCcceeeeeehhhhhhhhcCceeEEEEEchhhhhh--HHhhccccceeeeEeCCCCc-
Confidence            9999999997765321  12345677777777766 788999999999999876654  44567888999999888766 


Q ss_pred             eEEEEeCCCcEEEEecCCChhhH
Q psy7057         255 GGVKVSDDGIVRVFSANPDRQAE  277 (557)
Q Consensus       255 ~~vs~s~DG~IrvW~~~~~~~~~  277 (557)
                      .+++++.|++||+||+-++...+
T Consensus       590 WlisasmD~tIr~wDlpt~~lID  612 (910)
T KOG1539|consen  590 WLISASMDSTIRTWDLPTGTLID  612 (910)
T ss_pred             EEEEeecCCcEEEEeccCcceee
Confidence            69999999999999999876553

>KOG4328|consensus

Probab=99.73  E-value=2.5e-16  Score=156.08  Aligned_cols=270  Identities=15%  Similarity=0.203  Sum_probs=193.2

Q ss_pred             cEEEEEeccCcccEEEEEEcCCCc---EEEEECCCcEEEEcCCC--------------------CCCCC-CCCEEEEEEC
Q psy7057           2 YKLSTALYGHSMDVRSLSVTPDGC---ILSASRDKSAKLWKPND--------------------LSPGA-KVNTLLSASW   57 (557)
Q Consensus         2 ~kl~~~l~gH~~~V~~l~~spdg~---l~sgs~Dg~V~iWd~~~--------------------~~~~~-~~~~l~sgs~   57 (557)
                      |....+.+-|.+.|++++|+|...   +++|+.-|.|-+||+..                    +.++| +...+++.|.
T Consensus       176 ~~~~~v~kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSy  255 (498)
T KOG4328|consen  176 YRILNVAKVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSY  255 (498)
T ss_pred             ceecceeEecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeeecc
Confidence            344566778999999999999653   77999999999999942                    22332 3567999999


Q ss_pred             CCeEEEEECCCCeE--EEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe--CCCcEEEEEeCCCCCEEEEEEeCCCe
Q psy7057          58 DMTAKLWCLESQQC--KLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS--EEGEFLKTLTGHTDCVRGLAVLNDTD  132 (557)
Q Consensus        58 Dg~i~iwd~~~~~~--~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd--~~~~~~~~l~~h~~~V~~l~~~~~~~  132 (557)
                      ||+||+-|+++...  +.++......++++.|+.+. .++.+..=|...+||  ..+.....+.-|...|++|+++|...
T Consensus       256 DGtiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~NP~~p  335 (498)
T KOG4328|consen  256 DGTIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKITSVALNPVCP  335 (498)
T ss_pred             CceeeeeeecchhhHHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCccchhhhhhhcccceeecCCCCc
Confidence            99999999988643  33443345566777777765 677777777999999  34455667778999999999999844


Q ss_pred             --EEEEECCCeEEEEECCCCe----EEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECC---CC----ceEeeCC
Q psy7057         133 --FVSCSNDASIRVWDSTTGK----CVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNK---AQ----NSFMIPA  197 (557)
Q Consensus       133 --lvs~s~Dg~I~vwd~~~~~----~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~---~~----~~~~~~~  197 (557)
                        |+|+|.|++++|||++.-.    ++.....|...|.+..|  .+..|++.+.|..|+|||..   ..    ..+.+..
T Consensus       336 ~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss~~sa~~~p~~~I~Hn~  415 (498)
T KOG4328|consen  336 WFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSSCISAKDEPLGTIPHNN  415 (498)
T ss_pred             hheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceEeeccCCceEEeecccccccCCccceeeccC
Confidence              7899999999999998532    23344569999999999  44459999999999999963   11    2332222


Q ss_pred             c-----cEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEE-eCCCcEEEEec
Q psy7057         198 M-----SVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKV-SDDGIVRVFSA  270 (557)
Q Consensus       198 ~-----~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~-s~DG~IrvW~~  270 (557)
                      .     ......|.|+.. |++|-.-..|-|++-+.++..... .......|.++...++....+++| ++-|.|.||.-
T Consensus       416 ~t~RwlT~fKA~W~P~~~li~vg~~~r~IDv~~~~~~q~v~el-~~P~~~tI~~vn~~HP~~~~~~aG~~s~Gki~vft~  494 (498)
T KOG4328|consen  416 RTGRWLTPFKAAWDPDYNLIVVGRYPRPIDVFDGNGGQMVCEL-HDPESSTIPSVNEFHPMRDTLAAGGNSSGKIYVFTN  494 (498)
T ss_pred             cccccccchhheeCCCccEEEEeccCcceeEEcCCCCEEeeec-cCccccccccceeecccccceeccCCccceEEEEec
Confidence            1     244567999877 777888888999998877643221 111222344444445555545555 57899999975


Q ss_pred             CC
Q psy7057         271 NP  272 (557)
Q Consensus       271 ~~  272 (557)
                      ..
T Consensus       495 k~  496 (498)
T KOG4328|consen  495 KK  496 (498)
T ss_pred             CC
Confidence            43

>KOG0303|consensus

Probab=99.73  E-value=8.3e-17  Score=156.74  Aligned_cols=199  Identities=18%  Similarity=0.225  Sum_probs=154.9

Q ss_pred             EEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEeCC--------CcEEEEEeCCCCCEEEEEEeCC--CeEEEEECCCe
Q psy7057          74 TIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHSEE--------GEFLKTLTGHTDCVRGLAVLND--TDFVSCSNDAS  141 (557)
Q Consensus        74 ~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~~--------~~~~~~l~~h~~~V~~l~~~~~--~~lvs~s~Dg~  141 (557)
                      .+.+|+.+|..++|+|.+  .|+|||.|.+|.||...        .+++..|.+|...|-.++|+|.  +.|++++.|.+
T Consensus        76 ~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~  155 (472)
T KOG0303|consen   76 LVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNT  155 (472)
T ss_pred             CccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCce
Confidence            467899999999999954  99999999999999821        2457889999999999999998  44889999999


Q ss_pred             EEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCCceE---eeCCc-cEEEEEEcCCCcEEEEE
Q psy7057         142 IRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQNSF---MIPAM-SVWAVAILPNSDIVTGS  215 (557)
Q Consensus       142 I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~~~~---~~~~~-~v~~v~~~p~g~l~sg~  215 (557)
                      |.+||+.+++.+.++. |++.|++++|  +|.+|++.+.|+.|||||.++...+   ..|.+ .-..+.|..++.+++.+
T Consensus       156 v~iWnv~tgeali~l~-hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~~~heG~k~~Raifl~~g~i~tTG  234 (472)
T KOG0303|consen  156 VSIWNVGTGEALITLD-HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEGVAHEGAKPARAIFLASGKIFTTG  234 (472)
T ss_pred             EEEEeccCCceeeecC-CCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEeeecccccCCCcceeEEeccCceeeec
Confidence            9999999999999988 9999999999  8999999999999999998877322   34443 34567788888876655


Q ss_pred             ----cCCcEEEEecCCCCcc-hhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCCh
Q psy7057         216 ----SDGIVRVFSANPDRQA-EDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDR  274 (557)
Q Consensus       216 ----~Dg~I~iwd~~~~~~~-~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~~  274 (557)
                          +++.+-+||-..-... ....+.. ...+..-.+.++..+..++|-.||.||.|.+..+.
T Consensus       235 fsr~seRq~aLwdp~nl~eP~~~~elDt-SnGvl~PFyD~dt~ivYl~GKGD~~IRYyEit~d~  297 (472)
T KOG0303|consen  235 FSRMSERQIALWDPNNLEEPIALQELDT-SNGVLLPFYDPDTSIVYLCGKGDSSIRYFEITNEP  297 (472)
T ss_pred             cccccccceeccCcccccCcceeEEecc-CCceEEeeecCCCCEEEEEecCCcceEEEEecCCC
Confidence                4788999987654332 1111211 12222233445555666888899999999998765

>KOG1274|consensus

Probab=99.73  E-value=5.3e-16  Score=165.27  Aligned_cols=228  Identities=15%  Similarity=0.146  Sum_probs=180.8

Q ss_pred             CCCCCCCCEEEEEECCCeEEEEECCCC-eEEEEEcccCCcEEEEEEcCCCEEEEEECCCeEEEEe-CCCcEEEEEeCCCC
Q psy7057          43 LSPGAKVNTLLSASWDMTAKLWCLESQ-QCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHS-EEGEFLKTLTGHTD  120 (557)
Q Consensus        43 ~~~~~~~~~l~sgs~Dg~i~iwd~~~~-~~~~~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~  120 (557)
                      +++.+++.+|++++.||.|++|+..+. +.-.++..+...|.+++... +.|++|+.+++|.++. .++..--.+...+-
T Consensus        19 i~~d~~gefi~tcgsdg~ir~~~~~sd~e~P~ti~~~g~~v~~ia~~s-~~f~~~s~~~tv~~y~fps~~~~~iL~Rftl   97 (933)
T KOG1274|consen   19 ICYDPDGEFICTCGSDGDIRKWKTNSDEEEPETIDISGELVSSIACYS-NHFLTGSEQNTVLRYKFPSGEEDTILARFTL   97 (933)
T ss_pred             EEEcCCCCEEEEecCCCceEEeecCCcccCCchhhccCceeEEEeecc-cceEEeeccceEEEeeCCCCCccceeeeeec
Confidence            446677999999999999999997665 33333443788888887653 3899999999999998 34443334444567


Q ss_pred             CEEEEEEeCCCe-EEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC---ceEe
Q psy7057         121 CVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ---NSFM  194 (557)
Q Consensus       121 ~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~---~~~~  194 (557)
                      ++++++++.+|. ++.||.|-.|++-++.+......+++|.++|.++.+  .+++|++.+.||.|++|++...   ..+.
T Consensus        98 p~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~~~~~~~tl~  177 (933)
T KOG1274|consen   98 PIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQDGILSKTLT  177 (933)
T ss_pred             cceEEEEecCCcEEEeecCceeEEEEeccccchheeecccCCceeeeeEcCCCCEEEEEecCceEEEEEcccchhhhhcc
Confidence            899999999887 668899999999999999999999999999999999  5679999999999999997654   2222


Q ss_pred             e-------C-CccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcE
Q psy7057         195 I-------P-AMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIV  265 (557)
Q Consensus       195 ~-------~-~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~I  265 (557)
                      .       . ...+..++|+|++. ++..+.|+.|++|+..+...........+...+..+.+.+. +.++++++-||.|
T Consensus       178 ~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPn-G~YiAAs~~~g~I  256 (933)
T KOG1274|consen  178 GVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPN-GKYIAASTLDGQI  256 (933)
T ss_pred             cCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccCCceeheeecccccccceEEEEEcCC-CcEEeeeccCCcE
Confidence            1       1 33567899999965 99999999999999988766544444444444777777777 5578999999999


Q ss_pred             EEEecCC
Q psy7057         266 RVFSANP  272 (557)
Q Consensus       266 rvW~~~~  272 (557)
                      .||++++
T Consensus       257 ~vWnv~t  263 (933)
T KOG1274|consen  257 LVWNVDT  263 (933)
T ss_pred             EEEeccc
Confidence            9999986

>KOG0642|consensus

Probab=99.72  E-value=6e-17  Score=164.33  Aligned_cols=249  Identities=23%  Similarity=0.293  Sum_probs=177.6

Q ss_pred             cEEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCCCCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCC
Q psy7057           2 YKLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEM   80 (557)
Q Consensus         2 ~kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~   80 (557)
                      |.+.-++..|.+.|++++|.|-.- |++|+.||++++|+++.-..+          .        ...-+++.+|++|.+
T Consensus       284 w~ik~tl~s~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s----------~--------~~~~epi~tfraH~g  345 (577)
T KOG0642|consen  284 WNIKFTLRSHDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKS----------A--------EKDVEPILTFRAHEG  345 (577)
T ss_pred             cceeeeeecchhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCc----------c--------ccceeeeEEEecccC
Confidence            556668888999999999988655 888888888888887541111          0        012368899999999


Q ss_pred             cEEEEEEcCCC-EEEEEECCCeEEEEeCC-----------CcEEEEEeCCCCCEEEEEEeCC-CeEEEEECCCeEEEEEC
Q psy7057          81 AVWGVIQLANG-IIVTGCADKTIKLHSEE-----------GEFLKTLTGHTDCVRGLAVLND-TDFVSCSNDASIRVWDS  147 (557)
Q Consensus        81 ~V~~l~~~~~~-~l~sgs~dg~I~vwd~~-----------~~~~~~l~~h~~~V~~l~~~~~-~~lvs~s~Dg~I~vwd~  147 (557)
                      +|.|+++.+.+ .+.+|+.||+|+.|+..           ......+.||.+.|+.+++++. .+|++||.||++|+|+.
T Consensus       346 PVl~v~v~~n~~~~ysgg~Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~  425 (577)
T KOG0642|consen  346 PVLCVVVPSNGEHCYSGGIDGTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEP  425 (577)
T ss_pred             ceEEEEecCCceEEEeeccCceeeeeccCCCCCcccccCcchhccceeccccceeeeeecccccceeeecCCceEEeecc
Confidence            99999999988 99999999999999521           1234578899999999999987 45889999999999997


Q ss_pred             CCCeEEEEEeCC--CCcEEEEEEcCC---EEEEEeCCCeEEEEECCCCceEee----------CCccEEEEEEcCCCc-E
Q psy7057         148 TTGKCVHTMYGH--PNFIYSVAAHGD---LITSGGEDQCVCVYQNKAQNSFMI----------PAMSVWAVAILPNSD-I  211 (557)
Q Consensus       148 ~~~~~~~~~~~h--~~~V~~l~~~~~---~l~s~s~Dg~I~iwd~~~~~~~~~----------~~~~v~~v~~~p~g~-l  211 (557)
                      ....+ .++...  .+.-.++.+...   ..++...-+.-.+++....+.+..          ....+.-+..+|.+. .
T Consensus       426 ~~~~~-~~f~~~~e~g~Plsvd~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~  504 (577)
T KOG0642|consen  426 TEESP-CTFGEPKEHGYPLSVDRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADIT  504 (577)
T ss_pred             CCcCc-cccCCccccCCcceEeeccchhHhhhhhcccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCCee
Confidence            66555 444322  234456666222   222222223333333332222211          112467788888888 7


Q ss_pred             EEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCC
Q psy7057         212 VTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANP  272 (557)
Q Consensus       212 ~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~  272 (557)
                      +++.+|+.|+++|..++...  .....+...++++...+... .+++++.||.+++|.+..
T Consensus       505 ~~~hed~~Ir~~dn~~~~~l--~s~~a~~~svtslai~~ng~-~l~s~s~d~sv~l~kld~  562 (577)
T KOG0642|consen  505 FTAHEDRSIRFFDNKTGKIL--HSMVAHKDSVTSLAIDPNGP-YLMSGSHDGSVRLWKLDV  562 (577)
T ss_pred             EecccCCceecccccccccc--hheeeccceecceeecCCCc-eEEeecCCceeehhhccc
Confidence            78999999999999888765  34455677788887766655 689999999999998754

>KOG0321|consensus

Probab=99.71  E-value=4.6e-16  Score=159.72  Aligned_cols=227  Identities=13%  Similarity=0.151  Sum_probs=164.7

Q ss_pred             CCEEEEEECCCeEEEEECCCCeE------EEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeC-CCcEEEE--EeCC
Q psy7057          49 VNTLLSASWDMTAKLWCLESQQC------KLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSE-EGEFLKT--LTGH  118 (557)
Q Consensus        49 ~~~l~sgs~Dg~i~iwd~~~~~~------~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~-~~~~~~~--l~~h  118 (557)
                      ...|+.+..||.|.++|.+....      +.....|...|..+.|.|.. +|++++.|.++++||. .++++..  +.+|
T Consensus        64 eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~l~G~~~~~GH  143 (720)
T KOG0321|consen   64 EHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSRLVGGRLNLGH  143 (720)
T ss_pred             cceEEEecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCCCceeEEEccCCceeeeeeeccceeecceeeccc
Confidence            45788899999999999765432      34566799999999999954 9999999999999994 4455444  7899


Q ss_pred             CCCEEEEEEeCCCe--EEEEECCCeEEEEECCCCe--------------------E-------EEEEeCCCC----cEEE
Q psy7057         119 TDCVRGLAVLNDTD--FVSCSNDASIRVWDSTTGK--------------------C-------VHTMYGHPN----FIYS  165 (557)
Q Consensus       119 ~~~V~~l~~~~~~~--lvs~s~Dg~I~vwd~~~~~--------------------~-------~~~~~~h~~----~V~~  165 (557)
                      ...|.++||.+.+.  |++|+.||.|.|||++-..                    +       ++....|..    .|+.
T Consensus       144 ~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTv  223 (720)
T KOG0321|consen  144 TGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTV  223 (720)
T ss_pred             ccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhccccccccccCceeeeeEE
Confidence            99999999999855  8899999999999987321                    0       111122333    3455


Q ss_pred             EEE-cCCEEEEEeC-CCeEEEEECCCCce-----------EeeC---CccEEEEEEcCCCc-EEEEEcCCcEEEEecCCC
Q psy7057         166 VAA-HGDLITSGGE-DQCVCVYQNKAQNS-----------FMIP---AMSVWAVAILPNSD-IVTGSSDGIVRVFSANPD  228 (557)
Q Consensus       166 l~~-~~~~l~s~s~-Dg~I~iwd~~~~~~-----------~~~~---~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~  228 (557)
                      +.| |...|++++. |+.|+|||++....           +..+   ...+.+++....|. +++.|.|++|++|++.+.
T Consensus       224 v~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD~sIy~ynm~s~  303 (720)
T KOG0321|consen  224 VLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTDNSIYFYNMRSL  303 (720)
T ss_pred             EEEeccceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCCeEEEEecCCcEEEEecccc
Confidence            666 8889999887 99999999876521           1112   22466777777776 777788999999999877


Q ss_pred             CcchhHHHhccccee-EEEeccCCCceeEEEEeCCCcEEEEecCCChh
Q psy7057         229 RQAEDAVQAQYAEEV-KKLKSANEQEIGGVKVSDDGIVRVFSANPDRQ  275 (557)
Q Consensus       229 ~~~~~~~~~~~~~~v-~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~~~  275 (557)
                      .........++...- ..-.....+...+++|+.|....+|.++....
T Consensus       304 s~sP~~~~sg~~~~sf~vks~lSpd~~~l~SgSsd~~ayiw~vs~~e~  351 (720)
T KOG0321|consen  304 SISPVAEFSGKLNSSFYVKSELSPDDCSLLSGSSDEQAYIWVVSSPEA  351 (720)
T ss_pred             CcCchhhccCcccceeeeeeecCCCCceEeccCCCcceeeeeecCccC
Confidence            665444443333221 11122334455789999999999999887644

>KOG0302|consensus

Probab=99.71  E-value=2.2e-16  Score=152.99  Aligned_cols=201  Identities=12%  Similarity=0.136  Sum_probs=164.1

Q ss_pred             EcccCCcEEEEEEcCCC---EEEEEECCCeEEEEeCC-----------------CcEEEEEeCCCCCEEEEEEeCC--Ce
Q psy7057          75 IRQHEMAVWGVIQLANG---IIVTGCADKTIKLHSEE-----------------GEFLKTLTGHTDCVRGLAVLND--TD  132 (557)
Q Consensus        75 l~~h~~~V~~l~~~~~~---~l~sgs~dg~I~vwd~~-----------------~~~~~~l~~h~~~V~~l~~~~~--~~  132 (557)
                      ..+|.+.+..+...+-+   +.++-+..|.|.||++.                 .+++.++.+|...=.+|+|+|-  |.
T Consensus       147 ~i~h~g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~g~  226 (440)
T KOG0302|consen  147 SIPHYGGINRVRVSRLGNEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKTGR  226 (440)
T ss_pred             ccccccccceeeecccCCcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeecccccccc
Confidence            34577777777766644   67777889999999932                 2467888999999999999995  67


Q ss_pred             EEEEECCCeEEEEECCCCeEE---EEEeCCCCcEEEEEE---cCCEEEEEeCCCeEEEEECCCC-----ceEeeCCccEE
Q psy7057         133 FVSCSNDASIRVWDSTTGKCV---HTMYGHPNFIYSVAA---HGDLITSGGEDQCVCVYQNKAQ-----NSFMIPAMSVW  201 (557)
Q Consensus       133 lvs~s~Dg~I~vwd~~~~~~~---~~~~~h~~~V~~l~~---~~~~l~s~s~Dg~I~iwd~~~~-----~~~~~~~~~v~  201 (557)
                      +++|..-+.|++|...++.-.   ..|.+|+..|-.++|   ....|++||.||+|+|||.+..     .....|.+-|+
T Consensus       227 LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~kAh~sDVN  306 (440)
T KOG0302|consen  227 LLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVSTKAHNSDVN  306 (440)
T ss_pred             cccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeEeeccCCcee
Confidence            999988899999998876532   346679999999999   4568999999999999997654     44567888999


Q ss_pred             EEEEcCCCc-EEEEEcCCcEEEEecCCCCcc-hhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCChh
Q psy7057         202 AVAILPNSD-IVTGSSDGIVRVFSANPDRQA-EDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQ  275 (557)
Q Consensus       202 ~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~-~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~~~  275 (557)
                      .++|+.... |++|+.||+++|||++.-+.. .......|..+|+++.+.+.....+++++.|..|.+||++-++.
T Consensus       307 VISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~QitiWDlsvE~D  382 (440)
T KOG0302|consen  307 VISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQITIWDLSVEAD  382 (440)
T ss_pred             eEEccCCcceeeecCCCceEEEEEhhhccCCCcceeEEeccCCeeEEEeccccCceEEeccCCCcEEEEEeeccCC
Confidence            999998877 889999999999999865433 23445668889999999998888889999999999999986654

>KOG0307|consensus

Probab=99.71  E-value=2.9e-17  Score=178.85  Aligned_cols=257  Identities=13%  Similarity=0.121  Sum_probs=195.9

Q ss_pred             EEEEcCCCc--EEEE----------ECCCcEEEEcCCC---------------------CCCCCCCC----EEEEEECCC
Q psy7057          17 SLSVTPDGC--ILSA----------SRDKSAKLWKPND---------------------LSPGAKVN----TLLSASWDM   59 (557)
Q Consensus        17 ~l~~spdg~--l~sg----------s~Dg~V~iWd~~~---------------------~~~~~~~~----~l~sgs~Dg   59 (557)
                      .++|+|++.  +++|          +.+.++-||.+..                     +.|.+.+.    .|+.|..||
T Consensus        11 ~~awSp~~~~~laagt~aq~~D~sfst~~slEifeld~~~~~~dlk~~~s~~s~~rF~kL~W~~~g~~~~GlIaGG~edG   90 (1049)
T KOG0307|consen   11 TFAWSPASPPLLAAGTAAQQFDASFSTSASLEIFELDFSDESSDLKPVGSLQSSNRFNKLAWGSYGSHSHGLIAGGLEDG   90 (1049)
T ss_pred             eEEecCCCchhhHHHhhhhccccccccccccceeeecccCccccccccccccccccceeeeecccCCCccceeeccccCC
Confidence            468888875  3332          4466777775543                     45554444    488899999


Q ss_pred             eEEEEECCCC------eEEEEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEeCCCcE-EEEE--eCCCCCEEEEEEe
Q psy7057          60 TAKLWCLESQ------QCKLTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHSEEGEF-LKTL--TGHTDCVRGLAVL  128 (557)
Q Consensus        60 ~i~iwd~~~~------~~~~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~~~~~-~~~l--~~h~~~V~~l~~~  128 (557)
                      .|.+||...-      ..+.+...|++.|..+.|++.+  ++++|+.||.|.|||+..-. -.++  ....+.|.+++|.
T Consensus        91 ~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~~~~~~~eI~~lsWN  170 (1049)
T KOG0307|consen   91 NIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPGSQAPPSEIKCLSWN  170 (1049)
T ss_pred             ceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCCCCCCCcccceEeccc
Confidence            9999997652      2456678899999999999954  99999999999999954311 1111  1245679999998


Q ss_pred             CCC--eEEEEECCCeEEEEECCCCeEEEEEeCCCC--cEEEEEEcCC---EEEEEeCCC---eEEEEECCCC----ceEe
Q psy7057         129 NDT--DFVSCSNDASIRVWDSTTGKCVHTMYGHPN--FIYSVAAHGD---LITSGGEDQ---CVCVYQNKAQ----NSFM  194 (557)
Q Consensus       129 ~~~--~lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~--~V~~l~~~~~---~l~s~s~Dg---~I~iwd~~~~----~~~~  194 (557)
                      ..-  .|++++.+|++.|||++..+++-.+..|..  .+..+.|+++   .++++++|.   .|.+||++..    +.+.
T Consensus       171 rkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k~~~  250 (1049)
T KOG0307|consen  171 RKVSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLKILE  250 (1049)
T ss_pred             hhhhHHhhccCCCCCceeccccCCCcccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeecccccCCchhhhc
Confidence            763  377999999999999999988888876655  4667888443   677777654   6999997643    7778


Q ss_pred             eCCccEEEEEEcCCCc--EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCC
Q psy7057         195 IPAMSVWAVAILPNSD--IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANP  272 (557)
Q Consensus       195 ~~~~~v~~v~~~p~g~--l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~  272 (557)
                      +|...|.++.|++.+.  +++++.|+.|.+|+.++++.+....  .....+..+.|++..+..+++.+-||.|-|+++..
T Consensus       251 ~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~~~p--~~~nW~fdv~w~pr~P~~~A~asfdgkI~I~sl~~  328 (1049)
T KOG0307|consen  251 GHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVLGELP--AQGNWCFDVQWCPRNPSVMAAASFDGKISIYSLQG  328 (1049)
T ss_pred             ccccceeeeccCCCCchhhhcccCCCCeeEecCCCceEeeecC--CCCcceeeeeecCCCcchhhhheeccceeeeeeec
Confidence            9999999999999884  8899999999999999877653322  23455777888999998888899999999999877


Q ss_pred             Chh
Q psy7057         273 DRQ  275 (557)
Q Consensus       273 ~~~  275 (557)
                      ...
T Consensus       329 ~~~  331 (1049)
T KOG0307|consen  329 TDT  331 (1049)
T ss_pred             CCc
Confidence            643

>KOG0649|consensus

Probab=99.70  E-value=4.5e-15  Score=136.34  Aligned_cols=213  Identities=19%  Similarity=0.255  Sum_probs=161.2

Q ss_pred             EeccCcccEEEEEEcCCCcEEEEECCCcEEEEcCCC-----------------------------CCCCCCCCEEEEEEC
Q psy7057           7 ALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPND-----------------------------LSPGAKVNTLLSASW   57 (557)
Q Consensus         7 ~l~gH~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~-----------------------------~~~~~~~~~l~sgs~   57 (557)
                      ..++|.++|..++|. |..|++|+ ||.|+-|..+.                             +...|..+-++.++.
T Consensus        57 ~eqahdgpiy~~~f~-d~~Lls~g-dG~V~gw~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgG  134 (325)
T KOG0649|consen   57 PEQAHDGPIYYLAFH-DDFLLSGG-DGLVYGWEWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGG  134 (325)
T ss_pred             eccccCCCeeeeeee-hhheeecc-CceEEEeeehhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecC
Confidence            458999999999998 33355555 49999998765                             445566777888889


Q ss_pred             CCeEEEEECCCCeEEEEEcccCCcEEEEEE-cCCCEEEEEECCCeEEEEe-CCCcEEEEEeC---------CC-CCEEEE
Q psy7057          58 DMTAKLWCLESQQCKLTIRQHEMAVWGVIQ-LANGIIVTGCADKTIKLHS-EEGEFLKTLTG---------HT-DCVRGL  125 (557)
Q Consensus        58 Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~-~~~~~l~sgs~dg~I~vwd-~~~~~~~~l~~---------h~-~~V~~l  125 (557)
                      |+.+.-||+++|+..+++++|++.|.++.- +..+.+++|+.||++|+|| .+++++..+..         |. ..|.++
T Consensus       135 D~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigal  214 (325)
T KOG0649|consen  135 DGVIYQVDLEDGRIQREYRGHTDYVHSVVGRNANGQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGAL  214 (325)
T ss_pred             CeEEEEEEecCCEEEEEEcCCcceeeeeeecccCcceeecCCCccEEEEeccccceeEEeccccChhhcCcccCceeEEE
Confidence            999999999999999999999999999988 4456999999999999999 67777766542         22 235566


Q ss_pred             EEeCCCeEEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEEcCCEEEEEeCCCeEEEEECCCCce--EeeCCccEEEE
Q psy7057         126 AVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQNS--FMIPAMSVWAV  203 (557)
Q Consensus       126 ~~~~~~~lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~~~~--~~~~~~~v~~v  203 (557)
                      +.+  ...+.|+....+.+|.+++.++..+|. -.+.+..+.|..+.+++++..+.+.-|.+.....  +.......++.
T Consensus       215 a~~--edWlvCGgGp~lslwhLrsse~t~vfp-ipa~v~~v~F~~d~vl~~G~g~~v~~~~l~Gvl~a~ip~~s~~c~s~  291 (325)
T KOG0649|consen  215 AVN--EDWLVCGGGPKLSLWHLRSSESTCVFP-IPARVHLVDFVDDCVLIGGEGNHVQSYTLNGVLQANIPVESTACYSA  291 (325)
T ss_pred             ecc--CceEEecCCCceeEEeccCCCceEEEe-cccceeEeeeecceEEEeccccceeeeeeccEEEEeccCCccceeee
Confidence            553  446777777899999999999988886 5778889999889999999999999999765522  22222234444


Q ss_pred             EEcCCC-c-EEEEEcCCcEEEEe
Q psy7057         204 AILPNS-D-IVTGSSDGIVRVFS  224 (557)
Q Consensus       204 ~~~p~g-~-l~sg~~Dg~I~iwd  224 (557)
                      .++..- + +-.++....+.|+.
T Consensus       292 s~~~~p~k~~s~ag~s~~~~i~~  314 (325)
T KOG0649|consen  292 SWQTSPIKFISIAGFSNKLHILK  314 (325)
T ss_pred             cccCCceEEEEecccceeeeeee
Confidence            443322 2 44566777777764

>KOG0303|consensus

Probab=99.70  E-value=1.4e-15  Score=148.22  Aligned_cols=203  Identities=20%  Similarity=0.296  Sum_probs=153.5

Q ss_pred             EeccCcccEEEEEEcCCCc--EEEEECCCcEEEEcCCCCCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEE
Q psy7057           7 ALYGHSMDVRSLSVTPDGC--ILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWG   84 (557)
Q Consensus         7 ~l~gH~~~V~~l~~spdg~--l~sgs~Dg~V~iWd~~~~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~   84 (557)
                      .+.||+++|..++|+|-+.  |+|||.|.+|.||.+..      +. +.            ..-.+++..|.+|...|-.
T Consensus        76 ~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe------~~-l~------------~~ltepvv~L~gH~rrVg~  136 (472)
T KOG0303|consen   76 LVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPE------NG-LT------------RDLTEPVVELYGHQRRVGL  136 (472)
T ss_pred             CccCccccccccccCccCCceeecCCCCceEEEEECCC------cc-cc------------cCcccceEEEeecceeEEE
Confidence            3579999999999999543  77788888888887643      10 00            0112678889999999999


Q ss_pred             EEEcCCC--EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEEEEECCCCeEEEEEeCCC
Q psy7057          85 VIQLANG--IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHTMYGHP  160 (557)
Q Consensus        85 l~~~~~~--~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h~  160 (557)
                      ++|+|.-  .|++++.|.+|.+|+ .+|+.+.++. |.+.|.+++|+-+|. |++++.|+.|||||.++++.+..-.+|.
T Consensus       137 V~wHPtA~NVLlsag~Dn~v~iWnv~tgeali~l~-hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~~~he  215 (472)
T KOG0303|consen  137 VQWHPTAPNVLLSAGSDNTVSIWNVGTGEALITLD-HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEGVAHE  215 (472)
T ss_pred             EeecccchhhHhhccCCceEEEEeccCCceeeecC-CCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEeeeccccc
Confidence            9999954  899999999999999 6777777777 999999999999876 7799999999999999999999888886


Q ss_pred             C--cEEEEEE-cCCEEEEEe---CCCeEEEEECCCC------ceEeeCCccEEEEEEcCCCc--EEEEEcCCcEEEEecC
Q psy7057         161 N--FIYSVAA-HGDLITSGG---EDQCVCVYQNKAQ------NSFMIPAMSVWAVAILPNSD--IVTGSSDGIVRVFSAN  226 (557)
Q Consensus       161 ~--~V~~l~~-~~~~l~s~s---~Dg~I~iwd~~~~------~~~~~~~~~v~~v~~~p~g~--l~sg~~Dg~I~iwd~~  226 (557)
                      +  ..+.+-. ++..+.+|.   .+..+-+||....      +.+. ....|.---+.++..  .++|-.|+.||-|.+.
T Consensus       216 G~k~~Raifl~~g~i~tTGfsr~seRq~aLwdp~nl~eP~~~~elD-tSnGvl~PFyD~dt~ivYl~GKGD~~IRYyEit  294 (472)
T KOG0303|consen  216 GAKPARAIFLASGKIFTTGFSRMSERQIALWDPNNLEEPIALQELD-TSNGVLLPFYDPDTSIVYLCGKGDSSIRYFEIT  294 (472)
T ss_pred             CCCcceeEEeccCceeeeccccccccceeccCcccccCcceeEEec-cCCceEEeeecCCCCEEEEEecCCcceEEEEec
Confidence            5  3344433 677444443   5678999995443      2222 223455555677776  4567789999999998


Q ss_pred             CCCc
Q psy7057         227 PDRQ  230 (557)
Q Consensus       227 ~~~~  230 (557)
                      ...+
T Consensus       295 ~d~P  298 (472)
T KOG0303|consen  295 NEPP  298 (472)
T ss_pred             CCCc
Confidence            7653

>KOG2919|consensus

Probab=99.69  E-value=2.6e-15  Score=143.04  Aligned_cols=238  Identities=18%  Similarity=0.252  Sum_probs=176.1

Q ss_pred             EEEEEEcCCCc-EEEEECCCcEEEEcCCC------------------------------------CCCCCCCCEEEEEEC
Q psy7057          15 VRSLSVTPDGC-ILSASRDKSAKLWKPND------------------------------------LSPGAKVNTLLSASW   57 (557)
Q Consensus        15 V~~l~~spdg~-l~sgs~Dg~V~iWd~~~------------------------------------~~~~~~~~~l~sgs~   57 (557)
                      ...+.|+|||. |++-+.|..+++|++..                                    -+-.|+.+++++.+.
T Consensus        52 ~kgckWSPDGSciL~~sedn~l~~~nlP~dlys~~~~~~~~~~~~~~~r~~eg~tvydy~wYs~M~s~qP~t~l~a~ssr  131 (406)
T KOG2919|consen   52 LKGCKWSPDGSCILSLSEDNCLNCWNLPFDLYSKKADGPLNFSKHLSYRYQEGETVYDYCWYSRMKSDQPSTNLFAVSSR  131 (406)
T ss_pred             hccceeCCCCceEEeecccCeeeEEecChhhcccCCCCccccccceeEEeccCCEEEEEEeeeccccCCCccceeeeccc
Confidence            45678999999 99999999999998764                                    233466788999999


Q ss_pred             CCeEEEEECCCCeEEEEEcc--cCC---cEEEEEEcCCCEEEEEECCCeEEEEeC--CCcE--EEEE-----eCCCCCEE
Q psy7057          58 DMTAKLWCLESQQCKLTIRQ--HEM---AVWGVIQLANGIIVTGCADKTIKLHSE--EGEF--LKTL-----TGHTDCVR  123 (557)
Q Consensus        58 Dg~i~iwd~~~~~~~~~l~~--h~~---~V~~l~~~~~~~l~sgs~dg~I~vwd~--~~~~--~~~l-----~~h~~~V~  123 (557)
                      +.-|++||.-+|+....+++  |..   ...+++|+|+|.-+.++....|++||.  .|..  +...     .+..+.|.
T Consensus       132 ~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaGykrcirvFdt~RpGr~c~vy~t~~~~k~gq~giis  211 (406)
T KOG2919|consen  132 DQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAGYKRCIRVFDTSRPGRDCPVYTTVTKGKFGQKGIIS  211 (406)
T ss_pred             cCceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeecccceEEEeeccCCCCCCcchhhhhcccccccceee
Confidence            99999999999988777654  332   445899999994444567789999993  3332  2222     23467899


Q ss_pred             EEEEeCCC--eEEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEe-CCCeEEEEECCCC----ceEe
Q psy7057         124 GLAVLNDT--DFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGG-EDQCVCVYQNKAQ----NSFM  194 (557)
Q Consensus       124 ~l~~~~~~--~lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s-~Dg~I~iwd~~~~----~~~~  194 (557)
                      |++++|-.  .++.++...++-|+.-..+.++..+-+|.+.|+.+.|  +|+.|++|+ .|-.|..||++..    ..+.
T Consensus       212 c~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~~pv~~L~  291 (406)
T KOG2919|consen  212 CFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSRDPVYALE  291 (406)
T ss_pred             eeeccCCCCcceeeecccceeeeEecCCCCceeeecccCCCeeeEEeccCcCeecccccCCCeEEEEeehhccchhhhhh
Confidence            99999974  4778999888888887788999999999999999999  888999887 4678999998765    2333


Q ss_pred             eCCc-cEEEE--EEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCc
Q psy7057         195 IPAM-SVWAV--AILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQE  253 (557)
Q Consensus       195 ~~~~-~v~~v--~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~  253 (557)
                      .|.. .=..|  ...|.++ |++|+.||.|++||++..-. .......+...+..+...|.-+
T Consensus       292 rhv~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~~gn-~~sv~~~~sd~vNgvslnP~mp  353 (406)
T KOG2919|consen  292 RHVGDTNQRILFDLDPKGEILASGDTDGSVRVWDLKDLGN-EVSVTGNYSDTVNGVSLNPIMP  353 (406)
T ss_pred             hhccCccceEEEecCCCCceeeccCCCccEEEEecCCCCC-cccccccccccccceecCcccc
Confidence            3332 22233  4457777 77888999999999986322 1222334555666666665544

>KOG1273|consensus

Probab=99.69  E-value=4.5e-15  Score=140.96  Aligned_cols=229  Identities=15%  Similarity=0.145  Sum_probs=162.4

Q ss_pred             CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCC
Q psy7057          43 LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTD  120 (557)
Q Consensus        43 ~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~  120 (557)
                      +.+++.|.+|++|+.||.|.|||+.+......+.+|..+|+|++|+++| .|+|+|.|..|.+|| ..|.+++.++ ..+
T Consensus        29 ~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~rir-f~s  107 (405)
T KOG1273|consen   29 CQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRIR-FDS  107 (405)
T ss_pred             EEeccCcceeeeeccCCcEEEEEccccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEEE-ccC
Confidence            5677889999999999999999999988888999999999999999999 999999999999999 7788888776 678


Q ss_pred             CEEEEEEeCC--CeEEEEECCCeEEEEECCCCeEEEEEeCC--C---Cc-EEEEEE--cCCEEEEEeCCCeEEEEECCCC
Q psy7057         121 CVRGLAVLND--TDFVSCSNDASIRVWDSTTGKCVHTMYGH--P---NF-IYSVAA--HGDLITSGGEDQCVCVYQNKAQ  190 (557)
Q Consensus       121 ~V~~l~~~~~--~~lvs~s~Dg~I~vwd~~~~~~~~~~~~h--~---~~-V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~  190 (557)
                      +|+...|+|.  +.++++-.+..-.+-++..++  +++-..  .   .. -.+..|  .|+++++|...|.+.+++..+.
T Consensus       108 pv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~--h~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~a~t~  185 (405)
T KOG1273|consen  108 PVWGAQWHPRKRNKCVATIMEESPVVIDFSDPK--HSVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYDAETL  185 (405)
T ss_pred             ccceeeeccccCCeEEEEEecCCcEEEEecCCc--eeeccCCCccccccccccccccCCCCEEEEecCcceEEEEecchh
Confidence            9999999987  345555555555555554422  222111  1   11 112234  7889999999999999997766


Q ss_pred             ---ceEeeCC-ccEEEEEEcCCCc-EEEEEcCCcEEEEecCCC-------CcchhHHHhcccc--eeEEEeccCCCceeE
Q psy7057         191 ---NSFMIPA-MSVWAVAILPNSD-IVTGSSDGIVRVFSANPD-------RQAEDAVQAQYAE--EVKKLKSANEQEIGG  256 (557)
Q Consensus       191 ---~~~~~~~-~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~-------~~~~~~~~~~~~~--~v~~l~~~~~~~~~~  256 (557)
                         ..++... ..|..+.++..|+ |+.-+.|+.||.|++..-       .+...........  .=..+++.......+
T Consensus       186 e~vas~rits~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~di~~~~r~~e~e~~~K~qDvVNk~~Wk~ccfs~dgeYv~  265 (405)
T KOG1273|consen  186 ECVASFRITSVQAIKQIIVSRKGRFLIINTSDRVIRTYEISDIDDEGRDGEVEPEHKLQDVVNKLQWKKCCFSGDGEYVC  265 (405)
T ss_pred             eeeeeeeechheeeeEEEEeccCcEEEEecCCceEEEEehhhhcccCccCCcChhHHHHHHHhhhhhhheeecCCccEEE
Confidence               2333333 6788999999999 889999999999997621       1111111111110  112233444444333


Q ss_pred             EEEeCCCcEEEEecCCCh
Q psy7057         257 VKVSDDGIVRVFSANPDR  274 (557)
Q Consensus       257 vs~s~DG~IrvW~~~~~~  274 (557)
                      ++.+.-..+.||..+.+.
T Consensus       266 a~s~~aHaLYIWE~~~Gs  283 (405)
T KOG1273|consen  266 AGSARAHALYIWEKSIGS  283 (405)
T ss_pred             eccccceeEEEEecCCcc
Confidence            334466789999876653

>KOG1538|consensus

Probab=99.67  E-value=8.3e-16  Score=157.98  Aligned_cols=220  Identities=20%  Similarity=0.278  Sum_probs=172.9

Q ss_pred             EEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC--------------CCCCCCCCEEEEEECCCeEEEEECCC
Q psy7057           4 LSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND--------------LSPGAKVNTLLSASWDMTAKLWCLES   68 (557)
Q Consensus         4 l~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~--------------~~~~~~~~~l~sgs~Dg~i~iwd~~~   68 (557)
                      +.++|+||.+.|.|++|+.||+ +++|+.|..|.+|+..-              ++++|-...|++++-.. .-+|..+.
T Consensus        45 llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klEG~LkYSH~D~IQCMsFNP~~h~LasCsLsd-FglWS~~q  123 (1081)
T KOG1538|consen   45 LLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEGILKYSHNDAIQCMSFNPITHQLASCSLSD-FGLWSPEQ  123 (1081)
T ss_pred             cccccccccceEEEEEEccCCceeccCCCceeEEEecccccceeeeccCCeeeEeecCchHHHhhhcchhh-ccccChhh
Confidence            5688999999999999999998 89999999999998654              77888888888887653 55787654


Q ss_pred             CeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcEEEEEe---CCCCCEEEEEEeCC---C---eEEEEEC
Q psy7057          69 QQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFLKTLT---GHTDCVRGLAVLND---T---DFVSCSN  138 (557)
Q Consensus        69 ~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~~~l~---~h~~~V~~l~~~~~---~---~lvs~s~  138 (557)
                      ... ...+ ....+.+++|..+| +++.|-.+|+|.+-+..++....+.   +..++|++++|+|.   |   .++...+
T Consensus       124 K~V-~K~k-ss~R~~~CsWtnDGqylalG~~nGTIsiRNk~gEek~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW  201 (1081)
T KOG1538|consen  124 KSV-SKHK-SSSRIICCSWTNDGQYLALGMFNGTISIRNKNGEEKVKIERPGGSNSPIWSICWNPSSGEGRNDILAVADW  201 (1081)
T ss_pred             hhH-Hhhh-hheeEEEeeecCCCcEEEEeccCceEEeecCCCCcceEEeCCCCCCCCceEEEecCCCCCCccceEEEEec
Confidence            321 1111 35678899999999 8999999999999997776644443   47789999999986   2   2668889


Q ss_pred             CCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC--ceEeeCCccEEEEEEcCCCc-EEE
Q psy7057         139 DASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ--NSFMIPAMSVWAVAILPNSD-IVT  213 (557)
Q Consensus       139 Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~--~~~~~~~~~v~~v~~~p~g~-l~s  213 (557)
                      ..++..+.+ +|+.+..-+.-.-...|+++  +|.+++.|+.|+.+.+|..+..  .++-.....||+++..|+++ ++.
T Consensus       202 ~qTLSFy~L-sG~~Igk~r~L~FdP~CisYf~NGEy~LiGGsdk~L~~fTR~GvrLGTvg~~D~WIWtV~~~PNsQ~v~~  280 (1081)
T KOG1538|consen  202 GQTLSFYQL-SGKQIGKDRALNFDPCCISYFTNGEYILLGGSDKQLSLFTRDGVRLGTVGEQDSWIWTVQAKPNSQYVVV  280 (1081)
T ss_pred             cceeEEEEe-cceeecccccCCCCchhheeccCCcEEEEccCCCceEEEeecCeEEeeccccceeEEEEEEccCCceEEE
Confidence            999999986 46665543333334456776  8999999999999999984433  34444677999999999999 889


Q ss_pred             EEcCCcEEEEecCC
Q psy7057         214 GSSDGIVRVFSANP  227 (557)
Q Consensus       214 g~~Dg~I~iwd~~~  227 (557)
                      |+.||+|-.|++-.
T Consensus       281 GCqDGTiACyNl~f  294 (1081)
T KOG1538|consen  281 GCQDGTIACYNLIF  294 (1081)
T ss_pred             EEccCeeehhhhHH
Confidence            99999999998753

>KOG2055|consensus

Probab=99.67  E-value=2.9e-15  Score=148.74  Aligned_cols=221  Identities=13%  Similarity=0.174  Sum_probs=177.5

Q ss_pred             EEEeccCcccEEEEEEcCCCc--EEEEECCCcEEEEcCCC-------------------CCCCCCCCEEEEEECCCeEEE
Q psy7057           5 STALYGHSMDVRSLSVTPDGC--ILSASRDKSAKLWKPND-------------------LSPGAKVNTLLSASWDMTAKL   63 (557)
Q Consensus         5 ~~~l~gH~~~V~~l~~spdg~--l~sgs~Dg~V~iWd~~~-------------------~~~~~~~~~l~sgs~Dg~i~i   63 (557)
                      ++.+.--..+|.+++|.|+|.  +++++.......||+.+                   +..++++++|+..+..|.|.|
T Consensus       250 lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak~~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~l  329 (514)
T KOG2055|consen  250 LQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAKVTKLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHL  329 (514)
T ss_pred             heeeeeccCccceeeecCCCceEEEecccceEEEEeeccccccccccCCCCcccchhheeEecCCCCeEEEcccCceEEe
Confidence            344555567999999999997  78999999999999987                   566788999999999999999


Q ss_pred             EECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeC-CCcEEEEEeCCCC-CEEEEEEeCCCe-EEEEECC
Q psy7057          64 WCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSE-EGEFLKTLTGHTD-CVRGLAVLNDTD-FVSCSND  139 (557)
Q Consensus        64 wd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~-~~~~~~~l~~h~~-~V~~l~~~~~~~-lvs~s~D  139 (557)
                      ....+++.+.+++ -.+.|..++|+.++ .|++.+.+|.|.+||+ ...+++.+....+ .-+++|.++++. |++||..
T Consensus       330 LhakT~eli~s~K-ieG~v~~~~fsSdsk~l~~~~~~GeV~v~nl~~~~~~~rf~D~G~v~gts~~~S~ng~ylA~GS~~  408 (514)
T KOG2055|consen  330 LHAKTKELITSFK-IEGVVSDFTFSSDSKELLASGGTGEVYVWNLRQNSCLHRFVDDGSVHGTSLCISLNGSYLATGSDS  408 (514)
T ss_pred             ehhhhhhhhheee-eccEEeeEEEecCCcEEEEEcCCceEEEEecCCcceEEEEeecCccceeeeeecCCCceEEeccCc
Confidence            9999999888887 57889999999998 8888889999999994 4466666653221 235667777776 6799999


Q ss_pred             CeEEEEECC------CCeEEEEEeCCCCcEEEEEE--cCCEEEEEe--CCCeEEEEECCCCceEee------CCccEEEE
Q psy7057         140 ASIRVWDST------TGKCVHTMYGHPNFIYSVAA--HGDLITSGG--EDQCVCVYQNKAQNSFMI------PAMSVWAV  203 (557)
Q Consensus       140 g~I~vwd~~------~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s--~Dg~I~iwd~~~~~~~~~------~~~~v~~v  203 (557)
                      |.|.|||..      +.+++.++..-...|.+|.|  +..+|+.||  .+..+|+-.+.++..+..      .-+.|+|+
T Consensus       409 GiVNIYd~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d~qiLAiaS~~~knalrLVHvPS~TVFsNfP~~n~~vg~vtc~  488 (514)
T KOG2055|consen  409 GIVNIYDGNSCFASTNPKPIKTVDNLTTAITSLQFNHDAQILAIASRVKKNALRLVHVPSCTVFSNFPTSNTKVGHVTCM  488 (514)
T ss_pred             ceEEEeccchhhccCCCCchhhhhhhheeeeeeeeCcchhhhhhhhhccccceEEEeccceeeeccCCCCCCcccceEEE
Confidence            999999964      35677777777889999999  556666665  467888888777644332      23469999


Q ss_pred             EEcCCCc-EEEEEcCCcEEEEecC
Q psy7057         204 AILPNSD-IVTGSSDGIVRVFSAN  226 (557)
Q Consensus       204 ~~~p~g~-l~sg~~Dg~I~iwd~~  226 (557)
                      +|+|.+. ++.|-.+|.+++|.+.
T Consensus       489 aFSP~sG~lAvGNe~grv~l~kL~  512 (514)
T KOG2055|consen  489 AFSPNSGYLAVGNEAGRVHLFKLH  512 (514)
T ss_pred             EecCCCceEEeecCCCceeeEeec
Confidence            9999877 8899999999999874

>KOG2096|consensus

Probab=99.67  E-value=7e-15  Score=139.84  Aligned_cols=213  Identities=19%  Similarity=0.280  Sum_probs=158.7

Q ss_pred             cEEEEEEcCCCc--EEEEECCCcEEEEcCCC----------------------------CCCCCCCCEEEEEECCCeEEE
Q psy7057          14 DVRSLSVTPDGC--ILSASRDKSAKLWKPND----------------------------LSPGAKVNTLLSASWDMTAKL   63 (557)
Q Consensus        14 ~V~~l~~spdg~--l~sgs~Dg~V~iWd~~~----------------------------~~~~~~~~~l~sgs~Dg~i~i   63 (557)
                      --+.++|+||-+  ++++-+..++++|.+..                            +-....+.+|++++.|.+|.|
T Consensus       134 hpT~V~FapDc~s~vv~~~~g~~l~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~l  213 (420)
T KOG2096|consen  134 HPTRVVFAPDCKSVVVSVKRGNKLCVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICL  213 (420)
T ss_pred             CceEEEECCCcceEEEEEccCCEEEEEEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEE
Confidence            346789999987  55667778899997654                            112234678999999999999


Q ss_pred             EECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe----CCCc-----EEEEEeCCCCCEEEEEEeCCCe-
Q psy7057          64 WCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS----EEGE-----FLKTLTGHTDCVRGLAVLNDTD-  132 (557)
Q Consensus        64 wd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd----~~~~-----~~~~l~~h~~~V~~l~~~~~~~-  132 (557)
                      |+++ |+.+.++......-...+.+|+| .+++++-.-.+++|.    ..|.     .+..|++|...|..++|+++.. 
T Consensus       214 w~lk-Gq~L~~idtnq~~n~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r  292 (420)
T KOG2096|consen  214 WDLK-GQLLQSIDTNQSSNYDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTR  292 (420)
T ss_pred             EecC-CceeeeeccccccccceeeCCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcce
Confidence            9998 88888887766677788899999 788888888999998    2332     3567899999999999999865 


Q ss_pred             EEEEECCCeEEEEECCC-------CeEEEEEe--CC--CCcEEEEEE--cCCEEEEEeCCCeEEEEECCCCce----Eee
Q psy7057         133 FVSCSNDASIRVWDSTT-------GKCVHTMY--GH--PNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQNS----FMI  195 (557)
Q Consensus       133 lvs~s~Dg~I~vwd~~~-------~~~~~~~~--~h--~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~~~----~~~  195 (557)
                      +++.|.||++|+||+.-       .+.+++..  .|  .+.-..++.  +++.|+. +....+++|..+....    -..
T Consensus       293 ~vtvSkDG~wriwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~-s~gs~l~~~~se~g~~~~~~e~~  371 (420)
T KOG2096|consen  293 AVTVSKDGKWRIWDTDVRYEAGQDPKILKEGSAPLHAAGSEPVRLELSPSGDSLAV-SFGSDLKVFASEDGKDYPELEDI  371 (420)
T ss_pred             eEEEecCCcEEEeeccceEecCCCchHhhcCCcchhhcCCCceEEEeCCCCcEEEe-ecCCceEEEEcccCccchhHHHh
Confidence            88999999999999752       22233321  11  122224444  6665554 4556799998666532    245


Q ss_pred             CCccEEEEEEcCCCcEEEEEcCCcEEEEecCCC
Q psy7057         196 PAMSVWAVAILPNSDIVTGSSDGIVRVFSANPD  228 (557)
Q Consensus       196 ~~~~v~~v~~~p~g~l~sg~~Dg~I~iwd~~~~  228 (557)
                      |...|.+++|+++|++++.+.|+.+|++.-.++
T Consensus       372 h~~~Is~is~~~~g~~~atcGdr~vrv~~ntpg  404 (420)
T KOG2096|consen  372 HSTTISSISYSSDGKYIATCGDRYVRVIRNTPG  404 (420)
T ss_pred             hcCceeeEEecCCCcEEeeecceeeeeecCCCc
Confidence            788999999999999887888899999874443

>KOG1007|consensus

Probab=99.66  E-value=3.9e-15  Score=139.83  Aligned_cols=220  Identities=22%  Similarity=0.347  Sum_probs=169.6

Q ss_pred             EEeccCcccEEEEEEcCCCc--EEEEECC-------CcEEEEcCCC--------------------------CCCCCCCC
Q psy7057           6 TALYGHSMDVRSLSVTPDGC--ILSASRD-------KSAKLWKPND--------------------------LSPGAKVN   50 (557)
Q Consensus         6 ~~l~gH~~~V~~l~~spdg~--l~sgs~D-------g~V~iWd~~~--------------------------~~~~~~~~   50 (557)
                      ..|..|.+.|+.|+-+|-..  |+|+-.+       -.+-||.+..                          +.+.|++.
T Consensus        57 kvf~h~agEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~~~tlE~v~~Ldteavg~i~cvew~Pns~  136 (370)
T KOG1007|consen   57 KVFFHHAGEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLGQSNSSTLECVASLDTEAVGKINCVEWEPNSD  136 (370)
T ss_pred             hhhhcCCcceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccccCccccchhhHhhcCCHHHhCceeeEEEcCCCC
Confidence            45777899999999999665  4555332       3478998765                          45677788


Q ss_pred             EEEEEECCCeEEEEECCCCeE-EEEE-----cccCCcEEEEEEcC--CCEEEEEECCCeEEEEe-CCCcEEEEE-eCCCC
Q psy7057          51 TLLSASWDMTAKLWCLESQQC-KLTI-----RQHEMAVWGVIQLA--NGIIVTGCADKTIKLHS-EEGEFLKTL-TGHTD  120 (557)
Q Consensus        51 ~l~sgs~Dg~i~iwd~~~~~~-~~~l-----~~h~~~V~~l~~~~--~~~l~sgs~dg~I~vwd-~~~~~~~~l-~~h~~  120 (557)
                      .+++-. |..|.+|++..+.. +..+     ..|....++-+|+|  ++.-+....|+++..|| .+..+...+ ..|..
T Consensus       137 klasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt~d~tl~~~D~RT~~~~~sI~dAHgq  215 (370)
T KOG1007|consen  137 KLASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATTSDSTLQFWDLRTMKKNNSIEDAHGQ  215 (370)
T ss_pred             eeEEec-cCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEEeCCCcEEEEEccchhhhcchhhhhcc
Confidence            888776 88999999987754 3333     22566778889999  45555566899999999 444444444 47889


Q ss_pred             CEEEEEEeCCCe--EEEEECCCeEEEEECCC-CeEEEEEeCCCCcEEEEEE---cCCEEEEEeCCCeEEEEECCCC----
Q psy7057         121 CVRGLAVLNDTD--FVSCSNDASIRVWDSTT-GKCVHTMYGHPNFIYSVAA---HGDLITSGGEDQCVCVYQNKAQ----  190 (557)
Q Consensus       121 ~V~~l~~~~~~~--lvs~s~Dg~I~vwd~~~-~~~~~~~~~h~~~V~~l~~---~~~~l~s~s~Dg~I~iwd~~~~----  190 (557)
                      .|+.+.|.|+.+  |++|+.||.|++||.+. ..++.++.+|...|+++.|   +..++++++.|..|.+|.....    
T Consensus       216 ~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsca~svSSE~  295 (370)
T KOG1007|consen  216 RVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHSHWVWAVRFNPEHDQLILSGGSDSAVNLSCASSVSSEQ  295 (370)
T ss_pred             eeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCCCceEEEEEEecCccceEEEecCCCceeEEEecccccccc
Confidence            999999999865  77999999999999986 4588999999999999999   4568999999999999852110    


Q ss_pred             ----------------------------ceEeeCCccEEEEEEcCCCc--EEEEEcCCcEEEEecC
Q psy7057         191 ----------------------------NSFMIPAMSVWAVAILPNSD--IVTGSSDGIVRVFSAN  226 (557)
Q Consensus       191 ----------------------------~~~~~~~~~v~~v~~~p~g~--l~sg~~Dg~I~iwd~~  226 (557)
                                                  .++..|...|++++|+.-..  |++-+.||.+.|=.+.
T Consensus       296 qi~~~~dese~e~~dseer~kpL~dg~l~tydehEDSVY~~aWSsadPWiFASLSYDGRviIs~V~  361 (370)
T KOG1007|consen  296 QIEFEDDESESEDEDSEERVKPLQDGQLETYDEHEDSVYALAWSSADPWIFASLSYDGRVIISSVP  361 (370)
T ss_pred             ccccccccccCcchhhHHhcccccccccccccccccceEEEeeccCCCeeEEEeccCceEEeecCC
Confidence                                        24455788999999998776  8889999999886654

>KOG1524|consensus

Probab=99.66  E-value=5.2e-15  Score=149.07  Aligned_cols=243  Identities=18%  Similarity=0.195  Sum_probs=182.3

Q ss_pred             cCcccEEEEEEcCCCcEEEEECCCcEEEEcC-CC----------------CC-------CCCCCCEEEEEECCCeEEEEE
Q psy7057          10 GHSMDVRSLSVTPDGCILSASRDKSAKLWKP-ND----------------LS-------PGAKVNTLLSASWDMTAKLWC   65 (557)
Q Consensus        10 gH~~~V~~l~~spdg~l~sgs~Dg~V~iWd~-~~----------------~~-------~~~~~~~l~sgs~Dg~i~iwd   65 (557)
                      .|...|.|+.|+....++.++.|..+.+|.- ..                +.       -....+.++.++.||.+.|.+
T Consensus        12 r~~e~vc~v~w~~~eei~~~~dDh~~~~~~~~~~~s~~~~~~p~df~pt~~h~~~rs~~~g~~~d~~~i~s~DGkf~il~   91 (737)
T KOG1524|consen   12 RNSEKVCCVDWSSNEEIYFVSDDHQIFKWSDVSRDSVEVAKLPDDFVPTDMHLGGRSSGGGKGSDTLLICSNDGRFVILN   91 (737)
T ss_pred             ccceeEEeecccccceEEEeccCceEEEeecccchhhhhhhCCcccCCccccccccccCCCCCcceEEEEcCCceEEEec
Confidence            5888889999998888777777777777643 22                11       112346799999999999988


Q ss_pred             CCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcEEEEEeCCCCCEEEEEEeCCCeEEEEECCCeEEE
Q psy7057          66 LESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRV  144 (557)
Q Consensus        66 ~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~I~v  144 (557)
                       +.++....+..|.+.+.|-.|+|+| -|++++.||.|++|..+|....++.....+|+|++|.|+..=+.-+..+.+.|
T Consensus        92 -k~~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSrsGMLRStl~Q~~~~v~c~~W~p~S~~vl~c~g~h~~I  170 (737)
T KOG1524|consen   92 -KSARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSRSGMLRSTVVQNEESIRCARWAPNSNSIVFCQGGHISI  170 (737)
T ss_pred             -ccchhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEeccchHHHHHhhcCceeEEEEECCCCCceEEecCCeEEE
Confidence             5677888899999999999999999 89999999999999999888777777888999999999865222233456666


Q ss_pred             EECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC--ceEeeCCccEEEEEEcCCCcEEEEEcCCcE
Q psy7057         145 WDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ--NSFMIPAMSVWAVAILPNSDIVTGSSDGIV  220 (557)
Q Consensus       145 wd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~--~~~~~~~~~v~~v~~~p~g~l~sg~~Dg~I  220 (557)
                      =-+.....+-..+.|.+.|.++.|  ..+.+++|++|-..++||.-..  ..-..|..+|++++|.|+..++.++ -+++
T Consensus       171 KpL~~n~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~G~~Lf~S~~~ey~ITSva~npd~~~~v~S-~nt~  249 (737)
T KOG1524|consen  171 KPLAANSKIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQGANLFTSAAEEYAITSVAFNPEKDYLLWS-YNTA  249 (737)
T ss_pred             eecccccceeEEeccCcEEEEeecCccccceeecCCceeEEeecccCcccccCChhccceeeeeeccccceeeee-eeee
Confidence            666666667788999999999999  4578999999999999994433  4555688899999999994455544 3455


Q ss_pred             EEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEE
Q psy7057         221 RVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVF  268 (557)
Q Consensus       221 ~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW  268 (557)
                      |+=.             ...+++..+.+.++.. .+.+|+..|.+.+=
T Consensus       250 R~~~-------------p~~GSifnlsWS~DGT-Q~a~gt~~G~v~~A  283 (737)
T KOG1524|consen  250 RFSS-------------PRVGSIFNLSWSADGT-QATCGTSTGQLIVA  283 (737)
T ss_pred             eecC-------------CCccceEEEEEcCCCc-eeeccccCceEEEe
Confidence            5211             1234555666655543 35566666765543

>KOG0307|consensus

Probab=99.66  E-value=4.1e-16  Score=169.94  Aligned_cols=217  Identities=18%  Similarity=0.216  Sum_probs=171.9

Q ss_pred             ccEEEEEEcCCC-----cEEEEECCCcEEEEcCCC----------------------CCCCCCC-CEEEEEECCCeEEEE
Q psy7057          13 MDVRSLSVTPDG-----CILSASRDKSAKLWKPND----------------------LSPGAKV-NTLLSASWDMTAKLW   64 (557)
Q Consensus        13 ~~V~~l~~spdg-----~l~sgs~Dg~V~iWd~~~----------------------~~~~~~~-~~l~sgs~Dg~i~iw   64 (557)
                      ..-+.|+|.+.|     -|+.|..||.|.+||...                      +.+++.. +.|++|+.||.|.||
T Consensus        65 ~rF~kL~W~~~g~~~~GlIaGG~edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iW  144 (1049)
T KOG0307|consen   65 NRFNKLAWGSYGSHSHGLIAGGLEDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILIW  144 (1049)
T ss_pred             ccceeeeecccCCCccceeeccccCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEEEe
Confidence            456789998754     267888999999999865                      4555544 499999999999999


Q ss_pred             ECCCCeEEEEEc--ccCCcEEEEEEcCCC--EEEEEECCCeEEEEeCCC-cEEEEEeCCCC--CEEEEEEeCCC--eEEE
Q psy7057          65 CLESQQCKLTIR--QHEMAVWGVIQLANG--IIVTGCADKTIKLHSEEG-EFLKTLTGHTD--CVRGLAVLNDT--DFVS  135 (557)
Q Consensus        65 d~~~~~~~~~l~--~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~~~-~~~~~l~~h~~--~V~~l~~~~~~--~lvs  135 (557)
                      |+...+.-.+..  .-...|.+++|+..-  .|++++.+|.+.|||++. +++..+..|..  .+..++|+|+.  ++++
T Consensus       145 Dlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~~  224 (1049)
T KOG0307|consen  145 DLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLLV  224 (1049)
T ss_pred             ccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceeccccCCCcccccccCCCccceeeeeeCCCCceeeee
Confidence            998755444332  245789999999854  899999999999999544 45556655543  47789999994  5887


Q ss_pred             EECCC---eEEEEECCC-CeEEEEEeCCCCcEEEEEE---cCCEEEEEeCCCeEEEEECCCCc---eEeeCCccEEEEEE
Q psy7057         136 CSNDA---SIRVWDSTT-GKCVHTMYGHPNFIYSVAA---HGDLITSGGEDQCVCVYQNKAQN---SFMIPAMSVWAVAI  205 (557)
Q Consensus       136 ~s~Dg---~I~vwd~~~-~~~~~~~~~h~~~V~~l~~---~~~~l~s~s~Dg~I~iwd~~~~~---~~~~~~~~v~~v~~  205 (557)
                      ++.|.   .|.+||+|. ..+++++++|...|.+|.|   +..+|+|++.|+.|.+|+.++..   .+......+..+.|
T Consensus       225 As~dd~~PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~~~p~~~nW~fdv~w  304 (1049)
T KOG0307|consen  225 ASGDDSAPVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVLGELPAQGNWCFDVQW  304 (1049)
T ss_pred             ecCCCCCceeEeecccccCCchhhhcccccceeeeccCCCCchhhhcccCCCCeeEecCCCceEeeecCCCCcceeeeee
Confidence            77664   599999986 4578888999999999999   56799999999999999988763   33444567899999


Q ss_pred             cCCCc--EEEEEcCCcEEEEecCCCC
Q psy7057         206 LPNSD--IVTGSSDGIVRVFSANPDR  229 (557)
Q Consensus       206 ~p~g~--l~sg~~Dg~I~iwd~~~~~  229 (557)
                      +|..-  |++++-||.|-|+.+....
T Consensus       305 ~pr~P~~~A~asfdgkI~I~sl~~~~  330 (1049)
T KOG0307|consen  305 CPRNPSVMAAASFDGKISIYSLQGTD  330 (1049)
T ss_pred             cCCCcchhhhheeccceeeeeeecCC
Confidence            99876  7788899999999987654

>KOG1188|consensus

Probab=99.66  E-value=6e-15  Score=141.69  Aligned_cols=181  Identities=13%  Similarity=0.170  Sum_probs=144.4

Q ss_pred             CCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCC-C--EEEEEECCCeEEEEeCC--C-cEEEEEeCCC-CC
Q psy7057          49 VNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLAN-G--IIVTGCADKTIKLHSEE--G-EFLKTLTGHT-DC  121 (557)
Q Consensus        49 ~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~-~--~l~sgs~dg~I~vwd~~--~-~~~~~l~~h~-~~  121 (557)
                      ...++++...|+|++||..+++.+..+.++...+..+.|... +  .+.+++.||+|++||.+  + ........|. .+
T Consensus        40 e~~vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~  119 (376)
T KOG1188|consen   40 ETAVAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTP  119 (376)
T ss_pred             ceeEEEEecCCeEEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCc
Confidence            367888899999999999999999999999999999999874 3  89999999999999932  2 2234445555 45


Q ss_pred             EEEEEEeCCCeEE-EEE----CCCeEEEEECCCCeE-EEEE-eCCCCcEEEEEE---cCCEEEEEeCCCeEEEEECCCC-
Q psy7057         122 VRGLAVLNDTDFV-SCS----NDASIRVWDSTTGKC-VHTM-YGHPNFIYSVAA---HGDLITSGGEDQCVCVYQNKAQ-  190 (557)
Q Consensus       122 V~~l~~~~~~~lv-s~s----~Dg~I~vwd~~~~~~-~~~~-~~h~~~V~~l~~---~~~~l~s~s~Dg~I~iwd~~~~-  190 (557)
                      ..|++..-...++ +|+    .+-.+.+||+|..+. +..+ ..|.+-|+++.|   +++.|++||.||.|.+||++.. 
T Consensus       120 f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d~  199 (376)
T KOG1188|consen  120 FICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKDN  199 (376)
T ss_pred             ceEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecCCCc
Confidence            6677665444444 443    356799999998876 5554 479999999999   6679999999999999997654 


Q ss_pred             -----ceEeeCCccEEEEEEcCCC--cEEEEEcCCcEEEEecCCCC
Q psy7057         191 -----NSFMIPAMSVWAVAILPNS--DIVTGSSDGIVRVFSANPDR  229 (557)
Q Consensus       191 -----~~~~~~~~~v~~v~~~p~g--~l~sg~~Dg~I~iwd~~~~~  229 (557)
                           .....+...|.++.|+.++  +|.+-+...+..+|+++.+.
T Consensus       200 EeDaL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~~~  245 (376)
T KOG1188|consen  200 EEDALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELEDGS  245 (376)
T ss_pred             chhhHHHhhcccceeeeeeeecCCcceEEEEEccCceeEEEccCCC
Confidence                 2334466789999999998  59899999999999998765

>KOG1007|consensus

Probab=99.64  E-value=3.1e-14  Score=133.90  Aligned_cols=211  Identities=19%  Similarity=0.238  Sum_probs=161.3

Q ss_pred             eEEEEECCCC---------eEEEEEc-ccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCC-cE-EEEE-----eCCCCC
Q psy7057          60 TAKLWCLESQ---------QCKLTIR-QHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEG-EF-LKTL-----TGHTDC  121 (557)
Q Consensus        60 ~i~iwd~~~~---------~~~~~l~-~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~-~~-~~~l-----~~h~~~  121 (557)
                      .+.||.+...         +++..|. .+-+.|.|+.|.|++ .+++- .|..|.+|++.. .. +..+     .+|...
T Consensus        94 ~aaiw~ipe~~~~S~~~tlE~v~~Ldteavg~i~cvew~Pns~klasm-~dn~i~l~~l~ess~~vaev~ss~s~e~~~~  172 (370)
T KOG1007|consen   94 GAAIWQIPEPLGQSNSSTLECVASLDTEAVGKINCVEWEPNSDKLASM-DDNNIVLWSLDESSKIVAEVLSSESAEMRHS  172 (370)
T ss_pred             eEEEEecccccCccccchhhHhhcCCHHHhCceeeEEEcCCCCeeEEe-ccCceEEEEcccCcchheeecccccccccce
Confidence            4679987543         2334443 355689999999988 56554 499999999432 22 2222     135667


Q ss_pred             EEEEEEeCC--CeEEEEECCCeEEEEECCCCeEEEEEe-CCCCcEEEEEEcCC---EEEEEeCCCeEEEEECCCC----c
Q psy7057         122 VRGLAVLND--TDFVSCSNDASIRVWDSTTGKCVHTMY-GHPNFIYSVAAHGD---LITSGGEDQCVCVYQNKAQ----N  191 (557)
Q Consensus       122 V~~l~~~~~--~~lvs~s~Dg~I~vwd~~~~~~~~~~~-~h~~~V~~l~~~~~---~l~s~s~Dg~I~iwd~~~~----~  191 (557)
                      .++-+|+|.  +..+....|+++..||+++.++...+. .|...|+.+.|+++   +|++|+.||.|++||.+..    +
T Consensus       173 ftsg~WspHHdgnqv~tt~d~tl~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~  252 (370)
T KOG1007|consen  173 FTSGAWSPHHDGNQVATTSDSTLQFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQ  252 (370)
T ss_pred             ecccccCCCCccceEEEeCCCcEEEEEccchhhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCcccc
Confidence            888889884  556666778999999999988777765 68889999999654   7999999999999997755    7


Q ss_pred             eEeeCCccEEEEEEcCCCc--EEEEEcCCcEEEEecCCCC---c---------------------c---hhHHHhcccce
Q psy7057         192 SFMIPAMSVWAVAILPNSD--IVTGSSDGIVRVFSANPDR---Q---------------------A---EDAVQAQYAEE  242 (557)
Q Consensus       192 ~~~~~~~~v~~v~~~p~g~--l~sg~~Dg~I~iwd~~~~~---~---------------------~---~~~~~~~~~~~  242 (557)
                      .+..|...||+|.|+|..+  +++||+|..|.+|....-.   +                     +   .......|..+
T Consensus       253 el~~HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tydehEDS  332 (370)
T KOG1007|consen  253 ELPGHSHWVWAVRFNPEHDQLILSGGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDEHEDS  332 (370)
T ss_pred             ccCCCceEEEEEEecCccceEEEecCCCceeEEEeccccccccccccccccccCcchhhHHhcccccccccccccccccc
Confidence            8889999999999999876  8899999999999754311   0                     0   01133457788


Q ss_pred             eEEEeccCCCceeEEEEeCCCcEEEEecC
Q psy7057         243 VKKLKSANEQEIGGVKVSDDGIVRVFSAN  271 (557)
Q Consensus       243 v~~l~~~~~~~~~~vs~s~DG~IrvW~~~  271 (557)
                      |..+.+...++..+++-|.||.+.|=++.
T Consensus       333 VY~~aWSsadPWiFASLSYDGRviIs~V~  361 (370)
T KOG1007|consen  333 VYALAWSSADPWIFASLSYDGRVIISSVP  361 (370)
T ss_pred             eEEEeeccCCCeeEEEeccCceEEeecCC
Confidence            99999999999999999999999887655

>KOG4328|consensus

Probab=99.64  E-value=3.6e-15  Score=147.99  Aligned_cols=206  Identities=15%  Similarity=0.128  Sum_probs=160.2

Q ss_pred             ECCCCeEEEEEcccCCcEEEEEEcCCC---EEEEEECCCeEEEEeCCC-----cEEEEEeCCCCCEEEEEEeCCC--eEE
Q psy7057          65 CLESQQCKLTIRQHEMAVWGVIQLANG---IIVTGCADKTIKLHSEEG-----EFLKTLTGHTDCVRGLAVLNDT--DFV  134 (557)
Q Consensus        65 d~~~~~~~~~l~~h~~~V~~l~~~~~~---~l~sgs~dg~I~vwd~~~-----~~~~~l~~h~~~V~~l~~~~~~--~lv  134 (557)
                      ++.+-......+.+..+|++++|+|..   ++++|...|.|-+||..+     .-+..+..|..+|.+|.|+|.+  +++
T Consensus       172 ~l~~~~~~~v~kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~  251 (498)
T KOG4328|consen  172 DLDDYRILNVAKVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIY  251 (498)
T ss_pred             ccccceecceeEecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhhee
Confidence            333444555667789999999999943   899999999999999632     2366778899999999999974  599


Q ss_pred             EEECCCeEEEEECCCCeE--EEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC----ceEeeCCccEEEEEEc
Q psy7057         135 SCSNDASIRVWDSTTGKC--VHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ----NSFMIPAMSVWAVAIL  206 (557)
Q Consensus       135 s~s~Dg~I~vwd~~~~~~--~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~----~~~~~~~~~v~~v~~~  206 (557)
                      +.|.||+|++-|+..+..  +.++..-...+.++.+  +...++.+..=|...+||++..    ..+..|...|.+++++
T Consensus       252 ssSyDGtiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~N  331 (498)
T KOG4328|consen  252 SSSYDGTIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKITSVALN  331 (498)
T ss_pred             eeccCceeeeeeecchhhHHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCccchhhhhhhcccceeecC
Confidence            999999999999886543  3333323445566666  4445667776679999997765    4566788899999999


Q ss_pred             CCCc--EEEEEcCCcEEEEecCCCCcch--hHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecC
Q psy7057         207 PNSD--IVTGSSDGIVRVFSANPDRQAE--DAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSAN  271 (557)
Q Consensus       207 p~g~--l~sg~~Dg~I~iwd~~~~~~~~--~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~  271 (557)
                      |...  |+++|.|++++|||++......  ......|...|.+..+.|.... ++|.|.|..||||+.+
T Consensus       332 P~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gt-l~TT~~D~~IRv~dss  399 (498)
T KOG4328|consen  332 PVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGT-LLTTCQDNEIRVFDSS  399 (498)
T ss_pred             CCCchheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCc-eEeeccCCceEEeecc
Confidence            9887  9999999999999998654332  2344567788888888888887 9999999999999964

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=99.63  E-value=1.3e-12  Score=134.95  Aligned_cols=266  Identities=28%  Similarity=0.429  Sum_probs=196.9

Q ss_pred             cEEEEEeccCcccEEEEEEcCCCc-EEEEEC-CCcEEEEcCCC----------------CCCCCCCC-EEEEEECCCeEE
Q psy7057           2 YKLSTALYGHSMDVRSLSVTPDGC-ILSASR-DKSAKLWKPND----------------LSPGAKVN-TLLSASWDMTAK   62 (557)
Q Consensus         2 ~kl~~~l~gH~~~V~~l~~spdg~-l~sgs~-Dg~V~iWd~~~----------------~~~~~~~~-~l~sgs~Dg~i~   62 (557)
                      +.....+.+|...|.+++|+|++. +++++. |+.+++|+...                +.+.+++. .+++++.|+.++
T Consensus       145 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~  224 (466)
T COG2319         145 GKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIR  224 (466)
T ss_pred             CeEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeeccCCCceEEEEEcCCcceEEEEecCCCcEE
Confidence            466788999999999999999997 777775 99999999874                44456666 555569999999


Q ss_pred             EEECCCCeEEE-EEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCC-Cc-EEEEEeCCCCCEEEEEEeCCC-eEEEEE
Q psy7057          63 LWCLESQQCKL-TIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEE-GE-FLKTLTGHTDCVRGLAVLNDT-DFVSCS  137 (557)
Q Consensus        63 iwd~~~~~~~~-~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~-~~-~~~~l~~h~~~V~~l~~~~~~-~lvs~s  137 (557)
                      +||...+.... .+.+|...+ ...|++++ .+++++.|+.+++|+.. .. .+..+.+|...|.++.+.|++ .+++++
T Consensus       225 ~wd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~  303 (466)
T COG2319         225 LWDLSTGKLLRSTLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASGS  303 (466)
T ss_pred             EEECCCCcEEeeecCCCCcce-eEeECCCCCEEEEecCCCcEEEeeecCCCcEEEEEecCCccEEEEEECCCCCEEEEee
Confidence            99988777777 688888875 44899988 88899999999999943 22 244446889999999999964 466788


Q ss_pred             CCCeEEEEECCCCeEEEEEe--CCCCcEEEEEEc--CCEEEEE-eCCCeEEEEECCCCc-eEeeCC-ccEEEEEEcCCCc
Q psy7057         138 NDASIRVWDSTTGKCVHTMY--GHPNFIYSVAAH--GDLITSG-GEDQCVCVYQNKAQN-SFMIPA-MSVWAVAILPNSD  210 (557)
Q Consensus       138 ~Dg~I~vwd~~~~~~~~~~~--~h~~~V~~l~~~--~~~l~s~-s~Dg~I~iwd~~~~~-~~~~~~-~~v~~v~~~p~g~  210 (557)
                      .|+.+++|+..+........  .|...+..+.+.  +..++.+ ..|+.+++|+..... ...... ..+..+.+.+ ..
T Consensus       304 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  382 (466)
T COG2319         304 SDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGKPLKTLEGHSNVLSVSFSP-DG  382 (466)
T ss_pred             CCCcEEEEEcCCCceEEEeeecccCCceEEEEECCCCCEEEEeecCCCcEEeeecCCCceeEEecCCceEEEEEECC-CC
Confidence            88889999998887766665  788888888882  1455555 688999999976653 222222 2278888888 45


Q ss_pred             -EEE-EEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCC
Q psy7057         211 -IVT-GSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANP  272 (557)
Q Consensus       211 -l~s-g~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~  272 (557)
                       ++. +..++.+++|+..............  ..+......+. ...+++++.++.+++|+...
T Consensus       383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  443 (466)
T COG2319         383 RVVSSGSTDGTVRLWDLSTGSLLRNLDGHT--SRVTSLDFSPD-GKSLASGSSDNTIRLWDLKT  443 (466)
T ss_pred             CEEEEecCCCceEEEecccCeeeeeccCCC--CcEEEEEECCC-CcEEEEecCCCcEEEEeccC
Confidence             444 6889999999998765443222211  23333333333 33456688999999999775

>KOG1445|consensus

Probab=99.62  E-value=1.3e-14  Score=148.63  Aligned_cols=219  Identities=15%  Similarity=0.104  Sum_probs=155.1

Q ss_pred             EECCCeEEEEECCCCe-----EEEEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEeCC--------CcEEEEEeCCC
Q psy7057          55 ASWDMTAKLWCLESQQ-----CKLTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHSEE--------GEFLKTLTGHT  119 (557)
Q Consensus        55 gs~Dg~i~iwd~~~~~-----~~~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~~--------~~~~~~l~~h~  119 (557)
                      ++.-|.|-||+++..-     .+-.+. ....|+.+.|.|-.  .|+.++.||.|++|.++        ..+...+..|.
T Consensus       599 ~g~gG~iai~el~~PGrLPDgv~p~l~-Ngt~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~  677 (1012)
T KOG1445|consen  599 AGSGGVIAIYELNEPGRLPDGVMPGLF-NGTLVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENEMTPEKILTIHG  677 (1012)
T ss_pred             cCCCceEEEEEcCCCCCCCcccccccc-cCceeeecccCCCChHHeeecccCceEEEEEeccCCCCcccCCcceeeeccc
Confidence            4556889999886532     112222 45689999999933  99999999999999832        24566788999


Q ss_pred             CCEEEEEEeCC--CeEEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC-ceEe
Q psy7057         120 DCVRGLAVLND--TDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ-NSFM  194 (557)
Q Consensus       120 ~~V~~l~~~~~--~~lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~-~~~~  194 (557)
                      ..|+++.|+|-  ..|++++.|.+|++||+++++....+.+|++.|..++|  +|+.+++.+.||+|++|..++. +.+.
T Consensus       678 eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~~~~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy~Prs~e~pv~  757 (1012)
T KOG1445|consen  678 EKITSLRFHPLAADVLAVASYDSTIELWDLANAKLYSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLRVYEPRSREQPVY  757 (1012)
T ss_pred             ceEEEEEecchhhhHhhhhhccceeeeeehhhhhhhheeccCcCceeEEEECCCCcceeeeecCceEEEeCCCCCCCccc
Confidence            99999999986  44789999999999999999999999999999999999  8899999999999999997665 3333


Q ss_pred             eCCc----cEEEEEEcCCCc-EEEEEcC----CcEEEEecCCCCcchhHHHhcccceeEEEec-cCCCceeEEEEeCCCc
Q psy7057         195 IPAM----SVWAVAILPNSD-IVTGSSD----GIVRVFSANPDRQAEDAVQAQYAEEVKKLKS-ANEQEIGGVKVSDDGI  264 (557)
Q Consensus       195 ~~~~----~v~~v~~~p~g~-l~sg~~D----g~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~-~~~~~~~~vs~s~DG~  264 (557)
                      .-..    .--.+.|.-+|+ +++.+.|    +.|.+|+...-.........--.....-+.+ ..+....+++|-.|..
T Consensus       758 Eg~gpvgtRgARi~wacdgr~viv~Gfdk~SeRQv~~Y~Aq~l~~~pl~t~~lDvaps~LvP~YD~Ds~~lfltGKGD~~  837 (1012)
T KOG1445|consen  758 EGKGPVGTRGARILWACDGRIVIVVGFDKSSERQVQMYDAQTLDLRPLYTQVLDVAPSPLVPHYDYDSNVLFLTGKGDRF  837 (1012)
T ss_pred             cCCCCccCcceeEEEEecCcEEEEecccccchhhhhhhhhhhccCCcceeeeecccCccccccccCCCceEEEecCCCce
Confidence            3222    234566777888 4444443    4566776554322211111111111111222 3344556689999999


Q ss_pred             EEEEecCCCh
Q psy7057         265 VRVFSANPDR  274 (557)
Q Consensus       265 IrvW~~~~~~  274 (557)
                      |.+|.+-.+.
T Consensus       838 v~~yEv~~es  847 (1012)
T KOG1445|consen  838 VNMYEVIYES  847 (1012)
T ss_pred             EEEEEecCCC
Confidence            9999876654

>KOG1188|consensus

Probab=99.62  E-value=4e-15  Score=142.90  Aligned_cols=222  Identities=15%  Similarity=0.231  Sum_probs=161.3

Q ss_pred             EEEEeccCcccEEEEEEcCC-C-c-EEEEECCCcEEEEcCCC-------------------CCCCCCCCEEEEEE----C
Q psy7057           4 LSTALYGHSMDVRSLSVTPD-G-C-ILSASRDKSAKLWKPND-------------------LSPGAKVNTLLSAS----W   57 (557)
Q Consensus         4 l~~~l~gH~~~V~~l~~spd-g-~-l~sgs~Dg~V~iWd~~~-------------------~~~~~~~~~l~sgs----~   57 (557)
                      +...+++|...++.+.|..+ + . +.+|+.||+||+||++.                   +..+...+.+++|+    .
T Consensus        62 ~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f~~ld~nck~~ii~~GtE~~~s  141 (376)
T KOG1188|consen   62 LLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPFICLDLNCKKNIIACGTELTRS  141 (376)
T ss_pred             hhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcceEeeccCcCCeEEeccccccC
Confidence            45678999999999999875 2 3 88999999999999987                   22233455666664    3


Q ss_pred             CCeEEEEECCCCeE-EEEE-cccCCcEEEEEEcCCC--EEEEEECCCeEEEEeCCCc----EEEEEeCCCCCEEEEEEeC
Q psy7057          58 DMTAKLWCLESQQC-KLTI-RQHEMAVWGVIQLANG--IIVTGCADKTIKLHSEEGE----FLKTLTGHTDCVRGLAVLN  129 (557)
Q Consensus        58 Dg~i~iwd~~~~~~-~~~l-~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~~~~----~~~~l~~h~~~V~~l~~~~  129 (557)
                      +-.|.+||++..+. +..+ ..|.+.|+++.|+|..  +|+|||.||.|.++|.+..    .+.....|...|.++.|+.
T Consensus       142 ~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d~EeDaL~~viN~~sSI~~igw~~  221 (376)
T KOG1188|consen  142 DASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKDNEEDALLHVINHGSSIHLIGWLS  221 (376)
T ss_pred             ceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecCCCcchhhHHHhhcccceeeeeeeec
Confidence            56799999988765 4443 5699999999999976  9999999999999995433    2333445888899999998


Q ss_pred             CC--eEEEEECCCeEEEEECCCCeEEEEEeCC-------------CCcEEEEEE-cCCEEEEEeC-CCeEEEEECC---C
Q psy7057         130 DT--DFVSCSNDASIRVWDSTTGKCVHTMYGH-------------PNFIYSVAA-HGDLITSGGE-DQCVCVYQNK---A  189 (557)
Q Consensus       130 ~~--~lvs~s~Dg~I~vwd~~~~~~~~~~~~h-------------~~~V~~l~~-~~~~l~s~s~-Dg~I~iwd~~---~  189 (557)
                      .+  ++.+-+...+..+|++..+.+...+...             ...|.+... +...++.++. -+...++-+.   +
T Consensus       222 ~~ykrI~clTH~Etf~~~ele~~~~~~~~~~~~~~~~d~r~~~~~dY~I~~~~~~~~~~~~l~g~~~n~~~~~~~~~~~s  301 (376)
T KOG1188|consen  222 KKYKRIMCLTHMETFAIYELEDGSEETWLENPDVSADDLRKEDNCDYVINEHSPGDKDTCALAGTDSNKGTIFPLVDTSS  301 (376)
T ss_pred             CCcceEEEEEccCceeEEEccCCChhhcccCccchhhhHHhhhhhhheeecccCCCcceEEEeccccCceeEEEeeeccc
Confidence            87  7889999999999999988765554322             112333333 3344444443 5555555422   1


Q ss_pred             C------ceEee-CCccEEEEEEcCCCc-EEEEEcCCcEEEEec
Q psy7057         190 Q------NSFMI-PAMSVWAVAILPNSD-IVTGSSDGIVRVFSA  225 (557)
Q Consensus       190 ~------~~~~~-~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~  225 (557)
                      .      ..+.+ |...|+++.|.-.+. +.+||+||.+.+|..
T Consensus       302 ~~~~~~~a~l~g~~~eiVR~i~~~~~~~~l~TGGEDG~l~~Wk~  345 (376)
T KOG1188|consen  302 GSLLTEPAILQGGHEEIVRDILFDVKNDVLYTGGEDGLLQAWKV  345 (376)
T ss_pred             ccccCccccccCCcHHHHHHHhhhcccceeeccCCCceEEEEec
Confidence            1      23333 556788888886666 889999999999986

>KOG1517|consensus

Probab=99.61  E-value=3.7e-14  Score=152.84  Aligned_cols=273  Identities=16%  Similarity=0.244  Sum_probs=189.6

Q ss_pred             CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEccc---CCcEEEEEEcCCC---EEEEEECCCeEEEEe--CC--C--c
Q psy7057          43 LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQH---EMAVWGVIQLANG---IIVTGCADKTIKLHS--EE--G--E  110 (557)
Q Consensus        43 ~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h---~~~V~~l~~~~~~---~l~sgs~dg~I~vwd--~~--~--~  110 (557)
                      +.+++-...++++.....|++||.+.++.+..|..+   ...|+.+.+..+.   ++++|+.||.||||+  ..  +  +
T Consensus      1070 ~~~hpf~p~i~~ad~r~~i~vwd~e~~~~l~~F~n~~~~~t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y~~~~~~~e 1149 (1387)
T KOG1517|consen 1070 LKFHPFEPQIAAADDRERIRVWDWEKGRLLNGFDNGAFPDTRVSDLELINEQDDALLLTASSDGVIRIWKDYADKWKKPE 1149 (1387)
T ss_pred             eeecCCCceeEEcCCcceEEEEecccCceeccccCCCCCCCccceeeeecccchhheeeeccCceEEEecccccccCCce
Confidence            556667788899888889999999999888777654   4578888887633   899999999999998  22  1  1


Q ss_pred             EEEE---EeCC----CCCEEEEEEeCC-CeEEEEECCCeEEEEECCCCeEEEEEe-CCCCcEEEEEE---cCCEEEEEeC
Q psy7057         111 FLKT---LTGH----TDCVRGLAVLND-TDFVSCSNDASIRVWDSTTGKCVHTMY-GHPNFIYSVAA---HGDLITSGGE  178 (557)
Q Consensus       111 ~~~~---l~~h----~~~V~~l~~~~~-~~lvs~s~Dg~I~vwd~~~~~~~~~~~-~h~~~V~~l~~---~~~~l~s~s~  178 (557)
                      .+..   +.++    .+.=.-+.|... |.|++++.-..|||||.....++..+. +....|++++.   .|+.+++|..
T Consensus      1150 LVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~~~~diP~~s~t~vTaLS~~~~~gn~i~AGfa 1229 (1387)
T KOG1517|consen 1150 LVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVRSIRIWDAHKEQVVADIPYGSSTLVTALSADLVHGNIIAAGFA 1229 (1387)
T ss_pred             eEEeeccccccCccCCCCCeeeehhhhCCeEEecCCeeEEEEEecccceeEeecccCCCccceeecccccCCceEEEeec
Confidence            2221   1111    111133455443 668877778999999998877777665 44567888887   6789999999


Q ss_pred             CCeEEEEECCCC------ceEeeCCcc--EEEEEEcCCCc--EEEEEcCCcEEEEecCCCCcchhHHHhc-c--cceeEE
Q psy7057         179 DQCVCVYQNKAQ------NSFMIPAMS--VWAVAILPNSD--IVTGSSDGIVRVFSANPDRQAEDAVQAQ-Y--AEEVKK  245 (557)
Q Consensus       179 Dg~I~iwd~~~~------~~~~~~~~~--v~~v~~~p~g~--l~sg~~Dg~I~iwd~~~~~~~~~~~~~~-~--~~~v~~  245 (557)
                      ||.|++||.+..      ...+.|...  |..+.+-+.|.  +++|+.||.|++||++............ +  ....+.
T Consensus      1230 DGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~yGs~lTa 1309 (1387)
T KOG1517|consen 1230 DGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLTIVAHWEYGSALTA 1309 (1387)
T ss_pred             CCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEecccCcccccceeeeccccCcccee
Confidence            999999996543      345566665  99999988765  9999999999999998742221111111 1  123566


Q ss_pred             EeccCCCceeEEEEeCCCcEEEEecCCChhhHHHHHHHHHHHHHHHhhhhhcccCCeeccCCCCcccccCCCccCccEEE
Q psy7057         246 LKSANEQEIGGVKVSDDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDLPGKEVLYEPGKADGDVKM  325 (557)
Q Consensus       246 l~~~~~~~~~~vs~s~DG~IrvW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~G~~~~~~~~  325 (557)
                      +..+...+ .+++|+. +.|+||++..+...          .++.......+.++......+.+...+...|..|..+.+
T Consensus      1310 l~VH~hap-iiAsGs~-q~ikIy~~~G~~l~----------~~k~n~~F~~q~~gs~scL~FHP~~~llAaG~~Ds~V~i 1377 (1387)
T KOG1517|consen 1310 LTVHEHAP-IIASGSA-QLIKIYSLSGEQLN----------IIKYNPGFMGQRIGSVSCLAFHPHRLLLAAGSADSTVSI 1377 (1387)
T ss_pred             eeeccCCC-eeeecCc-ceEEEEecChhhhc----------ccccCcccccCcCCCcceeeecchhHhhhhccCCceEEE
Confidence            65555444 4677777 99999999876432          222223334456666666677777778888877777766


Q ss_pred             Ee
Q psy7057         326 VR  327 (557)
Q Consensus       326 ~~  327 (557)
                      ..
T Consensus      1378 Ys 1379 (1387)
T KOG1517|consen 1378 YS 1379 (1387)
T ss_pred             ee
Confidence            43

>KOG4378|consensus

Probab=99.61  E-value=1.5e-14  Score=144.50  Aligned_cols=243  Identities=12%  Similarity=0.131  Sum_probs=177.0

Q ss_pred             EEEEECCCcEEEEcCCC------------------CCCCCCCCEEEEE--ECCCeEEEEECCCC--e--EEEEEcccCCc
Q psy7057          26 ILSASRDKSAKLWKPND------------------LSPGAKVNTLLSA--SWDMTAKLWCLESQ--Q--CKLTIRQHEMA   81 (557)
Q Consensus        26 l~sgs~Dg~V~iWd~~~------------------~~~~~~~~~l~sg--s~Dg~i~iwd~~~~--~--~~~~l~~h~~~   81 (557)
                      |..+|...++++||...                  +.|... +.|+++  +.|..+++|.-...  +  .+..+.+.  .
T Consensus         5 l~~aS~gd~~kl~D~s~~~~~~~~~~~t~~pg~~s~~w~~~-n~lvvas~~gdk~~~~~~K~g~~~~Vp~~~k~~gd--~   81 (673)
T KOG4378|consen    5 LHVASTGDKTKLSDFSDLETKSEYVHQTAEPGDFSFNWQRR-NFLVVASMAGDKVMRIKEKDGKTPEVPRVRKLTGD--N   81 (673)
T ss_pred             eeeeccCCceEEeecccccCccccccCCCCCcceeeecccc-ceEEEeecCCceeEEEecccCCCCccceeeccccc--h
Confidence            55666777899999876                  333322 335544  45788999974332  1  12222222  4


Q ss_pred             EEEEEEcCCC-EEEEEECCCeEEEEeCCCc-EEEEEeCCCCCEEEEEEeCCC-eEEEEECCCeEEEEECCCCeEEEEEeC
Q psy7057          82 VWGVIQLANG-IIVTGCADKTIKLHSEEGE-FLKTLTGHTDCVRGLAVLNDT-DFVSCSNDASIRVWDSTTGKCVHTMYG  158 (557)
Q Consensus        82 V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~-~~~~l~~h~~~V~~l~~~~~~-~lvs~s~Dg~I~vwd~~~~~~~~~~~~  158 (557)
                      -.|++..... ++++|+..++|+|||+..+ +.+.+++|.+.|+++.+.... .|++++..|.|.|..+.++....+|..
T Consensus        82 ~~Cv~~~s~S~y~~sgG~~~~Vkiwdl~~kl~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~~  161 (673)
T KOG4378|consen   82 AFCVACASQSLYEISGGQSGCVKIWDLRAKLIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFTI  161 (673)
T ss_pred             HHHHhhhhcceeeeccCcCceeeehhhHHHHHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccccceec
Confidence            4455555545 8999999999999996554 467789999999999998654 478999999999999998877777764


Q ss_pred             C-CCcEEEEEEc--C-CEEEEEeCCCeEEEEECCCC----ceEeeCCccEEEEEEcCCCc--EEEEEcCCcEEEEecCCC
Q psy7057         159 H-PNFIYSVAAH--G-DLITSGGEDQCVCVYQNKAQ----NSFMIPAMSVWAVAILPNSD--IVTGSSDGIVRVFSANPD  228 (557)
Q Consensus       159 h-~~~V~~l~~~--~-~~l~s~s~Dg~I~iwd~~~~----~~~~~~~~~v~~v~~~p~g~--l~sg~~Dg~I~iwd~~~~  228 (557)
                      . ...|+-+.++  . .+|.+++.+|.|.+||....    .-...|..+...+||+|...  |++.|.|..|.+||....
T Consensus       162 ~sgqsvRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~  241 (673)
T KOG4378|consen  162 DSGQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQ  241 (673)
T ss_pred             CCCCeEEEeecccccceeeEeeccCCeEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEecccceEEEeecccc
Confidence            4 3455677773  2 36789999999999997655    34456888999999999887  889999999999999865


Q ss_pred             CcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCChh
Q psy7057         229 RQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQ  275 (557)
Q Consensus       229 ~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~~~  275 (557)
                      +..   ..-.+..+...+.+.++.. .+++|++.|.|..||+..-+.
T Consensus       242 ~s~---~~l~y~~Plstvaf~~~G~-~L~aG~s~G~~i~YD~R~~k~  284 (673)
T KOG4378|consen  242 AST---DRLTYSHPLSTVAFSECGT-YLCAGNSKGELIAYDMRSTKA  284 (673)
T ss_pred             ccc---ceeeecCCcceeeecCCce-EEEeecCCceEEEEecccCCC
Confidence            432   2223455667777766544 689999999999999876543

>KOG0649|consensus

Probab=99.61  E-value=1.6e-13  Score=126.17  Aligned_cols=235  Identities=14%  Similarity=0.139  Sum_probs=157.8

Q ss_pred             ccEEEEEEcCCCc-EEEEECCCcEEEEcCCCCCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC
Q psy7057          13 MDVRSLSVTPDGC-ILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG   91 (557)
Q Consensus        13 ~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~   91 (557)
                      ..|.+-+++|.++ |++|..+|+|.+..++++         .+++..       ......+...++|..+|..++|. +.
T Consensus        11 ~tvf~qa~sp~~~~l~agn~~G~iav~sl~sl---------~s~sa~-------~~gk~~iv~eqahdgpiy~~~f~-d~   73 (325)
T KOG0649|consen   11 NTVFAQAISPSKQYLFAGNLFGDIAVLSLKSL---------DSGSAE-------PPGKLKIVPEQAHDGPIYYLAFH-DD   73 (325)
T ss_pred             HHHHHHhhCCcceEEEEecCCCeEEEEEehhh---------hccccC-------CCCCcceeeccccCCCeeeeeee-hh
Confidence            3455556777776 667777777777766542         222221       12234556678999999999998 44


Q ss_pred             EEEEEECCCeEEEEe----CCC---cEEEEEe--CCC-----CCEEEEEEeCC-CeEEEEECCCeEEEEECCCCeEEEEE
Q psy7057          92 IIVTGCADKTIKLHS----EEG---EFLKTLT--GHT-----DCVRGLAVLND-TDFVSCSNDASIRVWDSTTGKCVHTM  156 (557)
Q Consensus        92 ~l~sgs~dg~I~vwd----~~~---~~~~~l~--~h~-----~~V~~l~~~~~-~~lvs~s~Dg~I~vwd~~~~~~~~~~  156 (557)
                      .|++|+ ||.|+-|.    .+.   +.+..++  -|.     -.|++|.+.|. +.++.++.|+.++-||+.+|+..+++
T Consensus        74 ~Lls~g-dG~V~gw~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~G~i~r~~  152 (325)
T KOG0649|consen   74 FLLSGG-DGLVYGWEWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLEDGRIQREY  152 (325)
T ss_pred             heeecc-CceEEEeeehhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEEEEEecCCEEEEEE
Confidence            566655 49999876    111   1111111  122     35889998876 56888889999999999999999999


Q ss_pred             eCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCCceEeeC-------------CccEEEEEEcCCCcEEEEEcCCcEE
Q psy7057         157 YGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQNSFMIP-------------AMSVWAVAILPNSDIVTGSSDGIVR  221 (557)
Q Consensus       157 ~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~~~~~~~-------------~~~v~~v~~~p~g~l~sg~~Dg~I~  221 (557)
                      ++|++.|.++..  ....+++|++||++|+||.++.+.....             ...|-+++.  +..-+.|+....+.
T Consensus       153 rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala~--~edWlvCGgGp~ls  230 (325)
T KOG0649|consen  153 RGHTDYVHSVVGRNANGQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALAV--NEDWLVCGGGPKLS  230 (325)
T ss_pred             cCCcceeeeeeecccCcceeecCCCccEEEEeccccceeEEeccccChhhcCcccCceeEEEec--cCceEEecCCCcee
Confidence            999999999998  3447999999999999998877332211             112344444  44556666777899


Q ss_pred             EEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCC
Q psy7057         222 VFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPD  273 (557)
Q Consensus       222 iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~  273 (557)
                      +|.++.....+.....++..   .+.+.   ...+++++.-..|.-|.++..
T Consensus       231 lwhLrsse~t~vfpipa~v~---~v~F~---~d~vl~~G~g~~v~~~~l~Gv  276 (325)
T KOG0649|consen  231 LWHLRSSESTCVFPIPARVH---LVDFV---DDCVLIGGEGNHVQSYTLNGV  276 (325)
T ss_pred             EEeccCCCceEEEeccccee---Eeeee---cceEEEeccccceeeeeeccE
Confidence            99999887765554444432   23222   224577777778888887653

>KOG0322|consensus

Probab=99.61  E-value=2.2e-14  Score=133.31  Aligned_cols=258  Identities=17%  Similarity=0.164  Sum_probs=177.7

Q ss_pred             EEeccCcccEEEEEEcCCCcEEEEECCCcEEEEcCCC-----------------CCCCCCCCEEEEEECCCeEEEEECCC
Q psy7057           6 TALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPND-----------------LSPGAKVNTLLSASWDMTAKLWCLES   68 (557)
Q Consensus         6 ~~l~gH~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~-----------------~~~~~~~~~l~sgs~Dg~i~iwd~~~   68 (557)
                      -.|++|.+.|+++.|..+++|++|..-|.|++|.+++                 +..-+ +..+.+-++|+.+.+|++.-
T Consensus         8 fvLRp~~~~v~s~~fqa~~rL~sg~~~G~V~~w~lqt~r~~~~~r~~g~~~it~lq~~p-~d~l~tqgRd~~L~lw~ia~   86 (323)
T KOG0322|consen    8 FVLRPHSSSVTSVLFQANERLMSGLSVGIVKMWVLQTERDLPLIRLFGRLFITNLQSIP-NDSLDTQGRDPLLILWTIAY   86 (323)
T ss_pred             eEeccccchheehhhccchhhhcccccceEEEEEeecCccchhhhhhccceeeceeecC-CcchhhcCCCceEEEEEccC
Confidence            4677999999999999999999999999999999987                 12222 36788899999999999976


Q ss_pred             CeEEEEEcccCCcEEEEEEcCCCE----------EEEEECCCe-EEEEeCCCc-EEEEE----eCCCCCEEEEEEeCC-C
Q psy7057          69 QQCKLTIRQHEMAVWGVIQLANGI----------IVTGCADKT-IKLHSEEGE-FLKTL----TGHTDCVRGLAVLND-T  131 (557)
Q Consensus        69 ~~~~~~l~~h~~~V~~l~~~~~~~----------l~sgs~dg~-I~vwd~~~~-~~~~l----~~h~~~V~~l~~~~~-~  131 (557)
                      +..+.   .|.-.++++.|.+..+          ++.-+.... +.+-|.... .+...    .+..+.+.|..+.-. +
T Consensus        87 s~~i~---i~Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~~~~Klgsvmc~~~~~~c~  163 (323)
T KOG0322|consen   87 SAFIS---IHSIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDSERSKLGSVMCQDKDHACG  163 (323)
T ss_pred             cceEE---EeeeeccccccccceeccCCCcchhheecCCcccchhhhhccCccceeEccCchhccccCceeeeecccccc
Confidence            54332   2334444555443211          111111100 111110000 11111    123456777764322 2


Q ss_pred             -e--EEEEECCCeEEEEECCCCeE----------EEEEeCCCCcEEEEEEcC--CEEEEEeCCCeEEEEECCCC------
Q psy7057         132 -D--FVSCSNDASIRVWDSTTGKC----------VHTMYGHPNFIYSVAAHG--DLITSGGEDQCVCVYQNKAQ------  190 (557)
Q Consensus       132 -~--lvs~s~Dg~I~vwd~~~~~~----------~~~~~~h~~~V~~l~~~~--~~l~s~s~Dg~I~iwd~~~~------  190 (557)
                       +  +++|-.+|.+.+||+.++..          +.....|..+|.++.++.  +.=++|+.+..+..|++...      
T Consensus       164 s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~~~Sl~~s~gslq~  243 (323)
T KOG0322|consen  164 STFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDKLVMYSLNHSTGSLQI  243 (323)
T ss_pred             ceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCccccceeeeeccccCcccc
Confidence             2  45888999999999998733          333456889999999943  34567777778888884322      


Q ss_pred             -ceEeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEE
Q psy7057         191 -NSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVF  268 (557)
Q Consensus       191 -~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW  268 (557)
                       ..+......|..+.+.||++ ++++|.|+.||||+.++.+++  ..+.-|...+..+.+.+..+ .++++|.|+.|.+|
T Consensus       244 ~~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pL--AVLkyHsagvn~vAfspd~~-lmAaaskD~rISLW  320 (323)
T KOG0322|consen  244 RKEITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPL--AVLKYHSAGVNAVAFSPDCE-LMAAASKDARISLW  320 (323)
T ss_pred             cceEEecCCCccceEEccCCcEEeecccCCcEEEEEeccCCch--hhhhhhhcceeEEEeCCCCc-hhhhccCCceEEee
Confidence             34444556789999999999 889999999999999988765  44555778899999988755 47899999999999


Q ss_pred             ec
Q psy7057         269 SA  270 (557)
Q Consensus       269 ~~  270 (557)
                      ++
T Consensus       321 kL  322 (323)
T KOG0322|consen  321 KL  322 (323)
T ss_pred             ec
Confidence            85

>KOG1538|consensus

Probab=99.60  E-value=1.1e-13  Score=142.52  Aligned_cols=226  Identities=17%  Similarity=0.243  Sum_probs=160.3

Q ss_pred             cEEEEEEcCCCcEEEEECCCcEEEEcCCCCCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-E
Q psy7057          14 DVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-I   92 (557)
Q Consensus        14 ~V~~l~~spdg~l~sgs~Dg~V~iWd~~~~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~   92 (557)
                      .|..++|-|||.                         .|+.+. +..+.+||...|..+.++++|++.|.|++|+.+| .
T Consensus        14 ci~d~afkPDGs-------------------------qL~lAA-g~rlliyD~ndG~llqtLKgHKDtVycVAys~dGkr   67 (1081)
T KOG1538|consen   14 CINDIAFKPDGT-------------------------QLILAA-GSRLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKR   67 (1081)
T ss_pred             chheeEECCCCc-------------------------eEEEec-CCEEEEEeCCCcccccccccccceEEEEEEccCCce
Confidence            788889999875                         222221 3467889999999999999999999999999999 9


Q ss_pred             EEEEECCCeEEEEeC--CCcEEEEEeCCCC---------------------------------------CEEEEEEeCCC
Q psy7057          93 IVTGCADKTIKLHSE--EGEFLKTLTGHTD---------------------------------------CVRGLAVLNDT  131 (557)
Q Consensus        93 l~sgs~dg~I~vwd~--~~~~~~~l~~h~~---------------------------------------~V~~l~~~~~~  131 (557)
                      ++||+.|+.+.+|+.  +|...  + .|.+                                       .+.+.+|..+|
T Consensus        68 FASG~aDK~VI~W~~klEG~Lk--Y-SH~D~IQCMsFNP~~h~LasCsLsdFglWS~~qK~V~K~kss~R~~~CsWtnDG  144 (1081)
T KOG1538|consen   68 FASGSADKSVIIWTSKLEGILK--Y-SHNDAIQCMSFNPITHQLASCSLSDFGLWSPEQKSVSKHKSSSRIICCSWTNDG  144 (1081)
T ss_pred             eccCCCceeEEEecccccceee--e-ccCCeeeEeecCchHHHhhhcchhhccccChhhhhHHhhhhheeEEEeeecCCC
Confidence            999999999999983  33211  1 1333                                       35555666666


Q ss_pred             e-EEEEECCCeEEEEECCCCeEEEEEe---CCCCcEEEEEEc-------CCEEEEEeCCCeEEEEECCCC--ceEeeCCc
Q psy7057         132 D-FVSCSNDASIRVWDSTTGKCVHTMY---GHPNFIYSVAAH-------GDLITSGGEDQCVCVYQNKAQ--NSFMIPAM  198 (557)
Q Consensus       132 ~-lvs~s~Dg~I~vwd~~~~~~~~~~~---~h~~~V~~l~~~-------~~~l~s~s~Dg~I~iwd~~~~--~~~~~~~~  198 (557)
                      + |+.|-.+|+|.+-+ .++++...+.   +...+|++++|.       .+.+++.....++.++.+...  ..-+...-
T Consensus       145 qylalG~~nGTIsiRN-k~gEek~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~LsG~~Igk~r~L~F  223 (1081)
T KOG1538|consen  145 QYLALGMFNGTISIRN-KNGEEKVKIERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQLSGKQIGKDRALNF  223 (1081)
T ss_pred             cEEEEeccCceEEeec-CCCCcceEEeCCCCCCCCceEEEecCCCCCCccceEEEEeccceeEEEEecceeecccccCCC
Confidence            6 45777788888876 4555444444   367789999982       236778888888888875543  11122233


Q ss_pred             cEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCC
Q psy7057         199 SVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPD  273 (557)
Q Consensus       199 ~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~  273 (557)
                      ...|+.+.++|. ++.||.|+.+++|..+.-+....   ......++.+...|... ..+.|+.||+|--|++-..
T Consensus       224 dP~CisYf~NGEy~LiGGsdk~L~~fTR~GvrLGTv---g~~D~WIWtV~~~PNsQ-~v~~GCqDGTiACyNl~fS  295 (1081)
T KOG1538|consen  224 DPCCISYFTNGEYILLGGSDKQLSLFTRDGVRLGTV---GEQDSWIWTVQAKPNSQ-YVVVGCQDGTIACYNLIFS  295 (1081)
T ss_pred             CchhheeccCCcEEEEccCCCceEEEeecCeEEeec---cccceeEEEEEEccCCc-eEEEEEccCeeehhhhHHh
Confidence            456889999999 88999999999998775443322   22445566666655554 5788999999999986543

>KOG1240|consensus

Probab=99.59  E-value=8.5e-14  Score=152.32  Aligned_cols=267  Identities=14%  Similarity=0.128  Sum_probs=179.9

Q ss_pred             EEEEEeccCcccEEEEEEcCCC-c-EEEEECCCcEEEEcCCC-----------------------CCCCCCCCEEEEEEC
Q psy7057           3 KLSTALYGHSMDVRSLSVTPDG-C-ILSASRDKSAKLWKPND-----------------------LSPGAKVNTLLSASW   57 (557)
Q Consensus         3 kl~~~l~gH~~~V~~l~~spdg-~-l~sgs~Dg~V~iWd~~~-----------------------~~~~~~~~~l~sgs~   57 (557)
                      .++++|..|+..|..++.+++. . ++|||.||+|++|+...                       +...+.++.++.++.
T Consensus      1039 ~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~Av~t~ 1118 (1431)
T KOG1240|consen 1039 ILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQFAVSTK 1118 (1431)
T ss_pred             eEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeEEEEcC
Confidence            4678899999999999998876 4 88999999999999876                       223345788999999


Q ss_pred             CCeEEEEECCCCe-------EEEEEccc-CCc-EEEEEEcC--CC-EEEEEECCCeEEEEeCCC-cEEEEE--eCCCCCE
Q psy7057          58 DMTAKLWCLESQQ-------CKLTIRQH-EMA-VWGVIQLA--NG-IIVTGCADKTIKLHSEEG-EFLKTL--TGHTDCV  122 (557)
Q Consensus        58 Dg~i~iwd~~~~~-------~~~~l~~h-~~~-V~~l~~~~--~~-~l~sgs~dg~I~vwd~~~-~~~~~l--~~h~~~V  122 (557)
                      ||.|++.+++..+       +.+....+ .+. |.+-+|..  .. .++.+..-+.|..||... ....++  ....+.|
T Consensus      1119 DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~~hG~v 1198 (1431)
T KOG1240|consen 1119 DGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQLRHGLV 1198 (1431)
T ss_pred             CCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcCccccce
Confidence            9999999987621       22222222 223 33334433  22 688888899999999432 222222  3345789


Q ss_pred             EEEEEeCCCe-EEEEECCCeEEEEECCCCeEEEEEe-CCCCcEEEEEE---cC--CEEEEEe--CCCeEEEEECCCC---
Q psy7057         123 RGLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHTMY-GHPNFIYSVAA---HG--DLITSGG--EDQCVCVYQNKAQ---  190 (557)
Q Consensus       123 ~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~-~h~~~V~~l~~---~~--~~l~s~s--~Dg~I~iwd~~~~---  190 (557)
                      ++++.+|.+. +++|+..|.+.+||+|-+.++..+. ++...++.+..   .+  ...++++  ..+.|.+|++.++   
T Consensus      1199 TSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~wn~~~g~~~ 1278 (1431)
T KOG1240|consen 1199 TSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVSTWNMETGLRQ 1278 (1431)
T ss_pred             eEEEecCCceEEEEecCCceEEEEEeecCceeecccCcccCCcceEEeeccCCCCceEEEecccCCCceeeeecccCcce
Confidence            9999999987 6799999999999999998888775 34567776665   33  4444444  5678999996554   


Q ss_pred             ceEeeC-----------C---------ccEEEEEEcCCCcEEEEEcCCcEEEEecCCCCcch------------------
Q psy7057         191 NSFMIP-----------A---------MSVWAVAILPNSDIVTGSSDGIVRVFSANPDRQAE------------------  232 (557)
Q Consensus       191 ~~~~~~-----------~---------~~v~~v~~~p~g~l~sg~~Dg~I~iwd~~~~~~~~------------------  232 (557)
                      ..+...           .         ..+.+....+++-+++|++|..||.||........                  
T Consensus      1279 ~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~~p~~ss~~~~~~s~~~~~~~~s~~ 1358 (1431)
T KOG1240|consen 1279 TVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPTRPEISSYAVPGPSTSYSTNSESYD 1358 (1431)
T ss_pred             EEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecCCccceeeccCCCcccccccccCccccccccchhcc
Confidence            122111           0         11223333334448899999999999975432210                  


Q ss_pred             -----------h----------H---------------HHhcccceeEEEeccCCCceeEEEEeCCCcEEEEe
Q psy7057         233 -----------D----------A---------------VQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFS  269 (557)
Q Consensus       233 -----------~----------~---------------~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~  269 (557)
                                 .          .               ....|...++.+.........+++++.||.|+||.
T Consensus      1359 ~~~i~~~~~i~e~i~~~~tv~~t~~~~~~~~~~~~~~~ps~~H~d~Itdma~~~~~q~llvs~s~dG~IkiWk 1431 (1431)
T KOG1240|consen 1359 LSTIPGSQFIDEFIIYQQTVGLTEALRENQKLRPGPSDPSTYHHDPITDMATLKSEQPLLVSSSRDGVIKIWK 1431 (1431)
T ss_pred             ccccCCCccchhhhhhhhhcCchhhcccccccccCCCCCcccccchhhhhhhhccCccEEEEecCCCeeeecC
Confidence                       0          0               00113444555555555666789999999999994

>KOG2919|consensus

Probab=99.59  E-value=2.4e-13  Score=129.84  Aligned_cols=229  Identities=17%  Similarity=0.218  Sum_probs=164.9

Q ss_pred             CCCCCCCCEEEEEECCCeEEEEECCCCe------------EEEEEc-ccCCcEEEEEEcC-------CC-EEEEEECCCe
Q psy7057          43 LSPGAKVNTLLSASWDMTAKLWCLESQQ------------CKLTIR-QHEMAVWGVIQLA-------NG-IIVTGCADKT  101 (557)
Q Consensus        43 ~~~~~~~~~l~sgs~Dg~i~iwd~~~~~------------~~~~l~-~h~~~V~~l~~~~-------~~-~l~sgs~dg~  101 (557)
                      +.|+|+|..|++-+.|..+++|++...-            ...+++ .....|...+|.+       +. ++++.+.+.-
T Consensus        55 ckWSPDGSciL~~sedn~l~~~nlP~dlys~~~~~~~~~~~~~~~r~~eg~tvydy~wYs~M~s~qP~t~l~a~ssr~~P  134 (406)
T KOG2919|consen   55 CKWSPDGSCILSLSEDNCLNCWNLPFDLYSKKADGPLNFSKHLSYRYQEGETVYDYCWYSRMKSDQPSTNLFAVSSRDQP  134 (406)
T ss_pred             ceeCCCCceEEeecccCeeeEEecChhhcccCCCCccccccceeEEeccCCEEEEEEeeeccccCCCccceeeeccccCc
Confidence            6789999999999999999999975310            111111 1245666666653       33 8999999999


Q ss_pred             EEEEe-CCCcEEEEEeC--CCC---CEEEEEEeCCCeEEEEECCCeEEEEEC-CCCeEE--EE-E----eCCCCcEEEEE
Q psy7057         102 IKLHS-EEGEFLKTLTG--HTD---CVRGLAVLNDTDFVSCSNDASIRVWDS-TTGKCV--HT-M----YGHPNFIYSVA  167 (557)
Q Consensus       102 I~vwd-~~~~~~~~l~~--h~~---~V~~l~~~~~~~lvs~s~Dg~I~vwd~-~~~~~~--~~-~----~~h~~~V~~l~  167 (557)
                      |++|| .+|+....+.+  |.+   .-.+++|+|+|.-+-++...+|+++|+ +.|.-.  .. +    .+..+.+.+++
T Consensus       135 Ih~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaGykrcirvFdt~RpGr~c~vy~t~~~~k~gq~giisc~a  214 (406)
T KOG2919|consen  135 IHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAGYKRCIRVFDTSRPGRDCPVYTTVTKGKFGQKGIISCFA  214 (406)
T ss_pred             eeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeecccceEEEeeccCCCCCCcchhhhhcccccccceeeeee
Confidence            99999 77877666553  443   456899999999887888899999998 555421  11 1    23467888888


Q ss_pred             E---cCCEEEEEeCCCeEEEEEC--C-CCceEeeCCccEEEEEEcCCCc-EEEEEc-CCcEEEEecCCCCcchhHHHhcc
Q psy7057         168 A---HGDLITSGGEDQCVCVYQN--K-AQNSFMIPAMSVWAVAILPNSD-IVTGSS-DGIVRVFSANPDRQAEDAVQAQY  239 (557)
Q Consensus       168 ~---~~~~l~s~s~Dg~I~iwd~--~-~~~~~~~~~~~v~~v~~~p~g~-l~sg~~-Dg~I~iwd~~~~~~~~~~~~~~~  239 (557)
                      +   +...++.++-..++-||..  + .+..+-+|...|+.++|+++|. |++|+. |-.|..||++..+.. ...+..+
T Consensus       215 ~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~~p-v~~L~rh  293 (406)
T KOG2919|consen  215 FSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSRDP-VYALERH  293 (406)
T ss_pred             ccCCCCcceeeecccceeeeEecCCCCceeeecccCCCeeeEEeccCcCeecccccCCCeEEEEeehhccch-hhhhhhh
Confidence            8   4558899998888777653  2 3377788999999999999998 888775 888999999876554 3333344


Q ss_pred             cc-eeEEE-eccCCCceeEEEEeCCCcEEEEecCC
Q psy7057         240 AE-EVKKL-KSANEQEIGGVKVSDDGIVRVFSANP  272 (557)
Q Consensus       240 ~~-~v~~l-~~~~~~~~~~vs~s~DG~IrvW~~~~  272 (557)
                      .. .-..+ .-.......+++|+.||.|++|++..
T Consensus       294 v~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~  328 (406)
T KOG2919|consen  294 VGDTNQRILFDLDPKGEILASGDTDGSVRVWDLKD  328 (406)
T ss_pred             ccCccceEEEecCCCCceeeccCCCccEEEEecCC
Confidence            43 22222 22334445689999999999999875

>KOG0644|consensus

Probab=99.59  E-value=3.5e-15  Score=157.12  Aligned_cols=221  Identities=20%  Similarity=0.302  Sum_probs=168.4

Q ss_pred             EEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEECC
Q psy7057           5 STALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCLE   67 (557)
Q Consensus         5 ~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~~   67 (557)
                      ++.|.||.++|.|+.|...|+ +++|+.|..|+||...+                ++.+...-+++++|.|..|++|.+.
T Consensus       183 ikrLlgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~  262 (1113)
T KOG0644|consen  183 IKRLLGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLP  262 (1113)
T ss_pred             HHHHHhhhhheeeeeeccccceEeecCccceeeeeeccchhhhccCCCCccccchhccchhhhhhhhcccCceEEEEecC
Confidence            356789999999999999998 99999999999999776                5555566789999999999999999


Q ss_pred             CCeEEEEEcccCCcEEEEEEcCCCEEEEEECCCeEEEEeCCCcEEEE---------------E----------eCC----
Q psy7057          68 SQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKT---------------L----------TGH----  118 (557)
Q Consensus        68 ~~~~~~~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~~~~~~~~---------------l----------~~h----  118 (557)
                      .+.++..+.+|++.|++++|+|-.   +.+.||++++||-.-.++..               +          .+.    
T Consensus       263 ~~~pvsvLrghtgavtaiafsP~~---sss~dgt~~~wd~r~~~~~y~prp~~~~~~~~~~s~~~~~~~~~f~Tgs~d~e  339 (1113)
T KOG0644|consen  263 DGAPVSVLRGHTGAVTAIAFSPRA---SSSDDGTCRIWDARLEPRIYVPRPLKFTEKDLVDSILFENNGDRFLTGSRDGE  339 (1113)
T ss_pred             CCchHHHHhccccceeeeccCccc---cCCCCCceEeccccccccccCCCCCCcccccceeeeeccccccccccccCCcc
Confidence            999999999999999999999954   78899999999933111110               0          000    


Q ss_pred             --CCCEEEEEEeCCCe-EE-----------EEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE---cCCEEEEEeCCCe
Q psy7057         119 --TDCVRGLAVLNDTD-FV-----------SCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA---HGDLITSGGEDQC  181 (557)
Q Consensus       119 --~~~V~~l~~~~~~~-lv-----------s~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~---~~~~l~s~s~Dg~  181 (557)
                        ....-++++..... |+           ++-.+-.+++|++.+|..++.+.+|...++.+.+   +.....+++.||.
T Consensus       340 a~n~e~~~l~~~~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g~l~H~l~ghsd~~yvLd~Hpfn~ri~msag~dgs  419 (1113)
T KOG0644|consen  340 ARNHEFEQLAWRSNLLIFVTRSSDLSSIVVTARNDHRLCVWNLYTGQLLHNLMGHSDEVYVLDVHPFNPRIAMSAGYDGS  419 (1113)
T ss_pred             cccchhhHhhhhccceEEEeccccccccceeeeeeeEeeeeecccchhhhhhcccccceeeeeecCCCcHhhhhccCCCc
Confidence              00111222222222 22           3344566888999999999999999999999988   5667889999999


Q ss_pred             EEEEECCCC---ceEeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCC
Q psy7057         182 VCVYQNKAQ---NSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPD  228 (557)
Q Consensus       182 I~iwd~~~~---~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~  228 (557)
                      ..|||.-..   +........+...+|+++|. ++....-|.++|.....+
T Consensus       420 t~iwdi~eg~pik~y~~gh~kl~d~kFSqdgts~~lsd~hgql~i~g~gqs  470 (1113)
T KOG0644|consen  420 TIIWDIWEGIPIKHYFIGHGKLVDGKFSQDGTSIALSDDHGQLYILGTGQS  470 (1113)
T ss_pred             eEeeecccCCcceeeecccceeeccccCCCCceEecCCCCCceEEeccCCC
Confidence            999996554   33333355777889999998 777777889999876543

>KOG1334|consensus

Probab=99.57  E-value=6.1e-14  Score=140.28  Aligned_cols=274  Identities=16%  Similarity=0.176  Sum_probs=199.7

Q ss_pred             cEEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC-------------------CCCCCCCCEEEEEECCCeE
Q psy7057           2 YKLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND-------------------LSPGAKVNTLLSASWDMTA   61 (557)
Q Consensus         2 ~kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~-------------------~~~~~~~~~l~sgs~Dg~i   61 (557)
                      +.+...|..|.+.|+.|.|+..|. |++||.|..|.+||+..                   +-+......|++++.||.+
T Consensus       132 ~~l~~kL~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqv  211 (559)
T KOG1334|consen  132 LRLQKKLNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQV  211 (559)
T ss_pred             hhhhhcccCCCCccceeeecccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCce
Confidence            456778999999999999999998 88999999999999876                   3334456789999999999


Q ss_pred             EEEECCC-CeE--EEEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEeCC-CcE---EEEEeCCCC---CEEEEEEeC
Q psy7057          62 KLWCLES-QQC--KLTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHSEE-GEF---LKTLTGHTD---CVRGLAVLN  129 (557)
Q Consensus        62 ~iwd~~~-~~~--~~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~~-~~~---~~~l~~h~~---~V~~l~~~~  129 (557)
                      ++=.+.. +.+  ...+..|.++|.-++.-|+.  .|.+++.|+.+.-+|+. +.+   ...-..+..   ...+++..|
T Consensus       212 r~s~i~~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia~~P  291 (559)
T KOG1334|consen  212 RVSEILETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLYTIAVDP  291 (559)
T ss_pred             eeeeeccccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccceeeeeEecCC
Confidence            9877543 322  34567799999999999977  89999999999988843 222   222233333   467788887


Q ss_pred             CC--eEEEEECCCeEEEEECCCCe------EEEEEeCC------CCcEEEEEE--cCCEEEEEeCCCeEEEEECCC--C-
Q psy7057         130 DT--DFVSCSNDASIRVWDSTTGK------CVHTMYGH------PNFIYSVAA--HGDLITSGGEDQCVCVYQNKA--Q-  190 (557)
Q Consensus       130 ~~--~lvs~s~Dg~I~vwd~~~~~------~~~~~~~h------~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~--~-  190 (557)
                      .+  .|++++.|..+++||.+.-.      .+.++..|      ...|+++++  ++.-|+++-.|-.|++|....  . 
T Consensus       292 ~nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~~G~  371 (559)
T KOG1334|consen  292 RNTNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASYNDEDIYLFNKSMGDGS  371 (559)
T ss_pred             CCccccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccceeeeecccceEEeccccccCC
Confidence            74  58899999999999976422      22333322      457899999  455677778888999996211  1 


Q ss_pred             -------------ceEeeCCc--cEEEEEEc-CCCc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCc
Q psy7057         191 -------------NSFMIPAM--SVWAVAIL-PNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQE  253 (557)
Q Consensus       191 -------------~~~~~~~~--~v~~v~~~-p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~  253 (557)
                                   +.+++|..  .|..+-|- |... +++|+.-|.|.||+-.+++.+.......+  .|.++...|..+
T Consensus       372 ~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~eii~~MegDr~--VVNCLEpHP~~P  449 (559)
T KOG1334|consen  372 EPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEIIRFMEGDRH--VVNCLEPHPHLP  449 (559)
T ss_pred             CCCCCcchhhccchhhcccccccccceeeeccCccceEEecCccceEEEEecchhHHHHHhhcccc--eEeccCCCCCCc
Confidence                         12445542  47777764 5555 66788889999999998876654444333  678887777777


Q ss_pred             eeEEEEeCCCcEEEEec-CCChhhHH
Q psy7057         254 IGGVKVSDDGIVRVFSA-NPDRQAED  278 (557)
Q Consensus       254 ~~~vs~s~DG~IrvW~~-~~~~~~~~  278 (557)
                      + +++.+-|--|+||+- .+++....
T Consensus       450 v-LAsSGid~DVKIWTP~~~er~~~~  474 (559)
T KOG1334|consen  450 V-LASSGIDHDVKIWTPLTAERATEP  474 (559)
T ss_pred             h-hhccCCccceeeecCCccccccCh
Confidence            4 788899999999998 44444443

>KOG1517|consensus

Probab=99.57  E-value=1.3e-13  Score=148.68  Aligned_cols=216  Identities=22%  Similarity=0.319  Sum_probs=159.3

Q ss_pred             ccEEEEEEcCCC-c--EEEEECCCcEEEEcCCC----------------------------CCCCCCCCEEEEEECCCeE
Q psy7057          13 MDVRSLSVTPDG-C--ILSASRDKSAKLWKPND----------------------------LSPGAKVNTLLSASWDMTA   61 (557)
Q Consensus        13 ~~V~~l~~spdg-~--l~sgs~Dg~V~iWd~~~----------------------------~~~~~~~~~l~sgs~Dg~i   61 (557)
                      ..|+.+++-.+. .  +++|+.||.||||+-..                            +.|.....+|++++.-..|
T Consensus      1110 t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y~~~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~I 1189 (1387)
T KOG1517|consen 1110 TRVSDLELINEQDDALLLTASSDGVIRIWKDYADKWKKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVRSI 1189 (1387)
T ss_pred             CccceeeeecccchhheeeeccCceEEEecccccccCCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCeeEE
Confidence            468888887643 2  88999999999996432                            3344445667777778999


Q ss_pred             EEEECCCCeEEEEEcc-cCCcEEEEEEcC-CC-EEEEEECCCeEEEEeCC----CcEEEEEeCCCCC--EEEEEEeCCC-
Q psy7057          62 KLWCLESQQCKLTIRQ-HEMAVWGVIQLA-NG-IIVTGCADKTIKLHSEE----GEFLKTLTGHTDC--VRGLAVLNDT-  131 (557)
Q Consensus        62 ~iwd~~~~~~~~~l~~-h~~~V~~l~~~~-~~-~l~sgs~dg~I~vwd~~----~~~~~~l~~h~~~--V~~l~~~~~~-  131 (557)
                      ||||.....+...+.. ....|+++.-.. .| .++.|..||.+++||..    ...+...+.|...  |..+.+.+.| 
T Consensus      1190 RIWDa~~E~~~~diP~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~ 1269 (1387)
T KOG1517|consen 1190 RIWDAHKEQVVADIPYGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGL 1269 (1387)
T ss_pred             EEEecccceeEeecccCCCccceeecccccCCceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecCCC
Confidence            9999988777766643 355666665443 33 99999999999999932    2356778889887  9999998764 


Q ss_pred             -eEEEEECCCeEEEEECCCCeEE--EEEeCCC--C-cEEEEEE--cCCEEEEEeCCCeEEEEECCCC--ceEee------
Q psy7057         132 -DFVSCSNDASIRVWDSTTGKCV--HTMYGHP--N-FIYSVAA--HGDLITSGGEDQCVCVYQNKAQ--NSFMI------  195 (557)
Q Consensus       132 -~lvs~s~Dg~I~vwd~~~~~~~--~~~~~h~--~-~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~--~~~~~------  195 (557)
                       .+++||.||.|++||++.....  .++..|.  + ..+++..  +...+++|+. +.|+||++...  ..++.      
T Consensus      1270 ~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~~G~~l~~~k~n~~F~~ 1348 (1387)
T KOG1517|consen 1270 GELVSGSQDGDIQLLDLRMSSKETFLTIVAHWEYGSALTALTVHEHAPIIASGSA-QLIKIYSLSGEQLNIIKYNPGFMG 1348 (1387)
T ss_pred             cceeeeccCCeEEEEecccCcccccceeeeccccCccceeeeeccCCCeeeecCc-ceEEEEecChhhhcccccCccccc
Confidence             5999999999999999974222  2222332  3 4788888  5568888888 99999995433  22221      


Q ss_pred             -CCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCC
Q psy7057         196 -PAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDR  229 (557)
Q Consensus       196 -~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~  229 (557)
                       ....+.|++|+|..- +++|+.|.+|.||.....+
T Consensus      1349 q~~gs~scL~FHP~~~llAaG~~Ds~V~iYs~~k~~ 1384 (1387)
T KOG1517|consen 1349 QRIGSVSCLAFHPHRLLLAAGSADSTVSIYSCEKPR 1384 (1387)
T ss_pred             CcCCCcceeeecchhHhhhhccCCceEEEeecCCcC
Confidence             234679999999877 8889999999999876543

>KOG1587|consensus

Probab=99.56  E-value=7.2e-13  Score=140.98  Aligned_cols=224  Identities=16%  Similarity=0.123  Sum_probs=154.3

Q ss_pred             CCCEEEEEECCCeEEEEECCCCeE--E----EEEcccCCcEEEEEEcCCC---EEEEEECCCeEEEEeCCCc-------E
Q psy7057          48 KVNTLLSASWDMTAKLWCLESQQC--K----LTIRQHEMAVWGVIQLANG---IIVTGCADKTIKLHSEEGE-------F  111 (557)
Q Consensus        48 ~~~~l~sgs~Dg~i~iwd~~~~~~--~----~~l~~h~~~V~~l~~~~~~---~l~sgs~dg~I~vwd~~~~-------~  111 (557)
                      +.++++.|+.+|.|.+||+..+..  .    .....|..+++.+.|..+-   .++++|.||.|+.|+.+.-       +
T Consensus       254 ~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~  333 (555)
T KOG1587|consen  254 DPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQNEHNTEFFSLSSDGSICSWDTDMLSLPVEGLL  333 (555)
T ss_pred             CcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEeccCCCCceEEEecCCcEeeeeccccccchhhcc
Confidence            356778888888888888876643  2    1234588999999998743   5999999999999983221       1


Q ss_pred             EEEEe------CCCCCEEEEEEeCC--CeEEEEECCCeEEEEE---CCCC-----eEEEEEeCCCCcEEEEEE---cCCE
Q psy7057         112 LKTLT------GHTDCVRGLAVLND--TDFVSCSNDASIRVWD---STTG-----KCVHTMYGHPNFIYSVAA---HGDL  172 (557)
Q Consensus       112 ~~~l~------~h~~~V~~l~~~~~--~~lvs~s~Dg~I~vwd---~~~~-----~~~~~~~~h~~~V~~l~~---~~~~  172 (557)
                      .....      .-...++++.|.+.  ..|+.|+.+|.|.-=+   .+..     +....+..|.+.|+++.+   ....
T Consensus       334 ~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~  413 (555)
T KOG1587|consen  334 LESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFITHIGPVYAVSRNPFYPKN  413 (555)
T ss_pred             cccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCCcccccccccccccccccCcceEeeecCCCccce
Confidence            11111      12246888999876  4599999999998733   2221     223355678899999998   3456


Q ss_pred             EEEEeCCCeEEEEECC-CC---ceEeeCCccEEEEEEcCCCc--EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEE
Q psy7057         173 ITSGGEDQCVCVYQNK-AQ---NSFMIPAMSVWAVAILPNSD--IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKL  246 (557)
Q Consensus       173 l~s~s~Dg~I~iwd~~-~~---~~~~~~~~~v~~v~~~p~g~--l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l  246 (557)
                      +++++ |.+++||... ..   ..+..+...+.+++|||-..  |+++..||.|.+||+......+.............+
T Consensus       414 fls~g-DW~vriWs~~~~~~Pl~~~~~~~~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~~~~Pv~s~~~~~~~l~~~  492 (555)
T KOG1587|consen  414 FLSVG-DWTVRIWSEDVIASPLLSLDSSPDYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQDDEEPVLSQKVCSPALTRV  492 (555)
T ss_pred             eeeec-cceeEeccccCCCCcchhhhhccceeeeeEEcCcCceEEEEEcCCCceehhhhhccccCCccccccccccccee
Confidence            66666 9999999965 22   34444556699999999876  888889999999999765544333332222222333


Q ss_pred             eccCCCceeEEEEeCCCcEEEEecCCC
Q psy7057         247 KSANEQEIGGVKVSDDGIVRVFSANPD  273 (557)
Q Consensus       247 ~~~~~~~~~~vs~s~DG~IrvW~~~~~  273 (557)
                       ........+++|...|.+.+|++.+.
T Consensus       493 -~~s~~g~~lavGd~~G~~~~~~l~~~  518 (555)
T KOG1587|consen  493 -RWSPNGKLLAVGDANGTTHILKLSES  518 (555)
T ss_pred             -ecCCCCcEEEEecCCCcEEEEEcCch
Confidence             33333445788999999999999653

>KOG1034|consensus

Probab=99.55  E-value=2.5e-13  Score=129.97  Aligned_cols=215  Identities=17%  Similarity=0.181  Sum_probs=161.1

Q ss_pred             CcccEEEEEEcCC---Cc--EEEEECCCcEEEEcCCC----------------CCCCC-CCCEEEEEECCCeEEEEECCC
Q psy7057          11 HSMDVRSLSVTPD---GC--ILSASRDKSAKLWKPND----------------LSPGA-KVNTLLSASWDMTAKLWCLES   68 (557)
Q Consensus        11 H~~~V~~l~~spd---g~--l~sgs~Dg~V~iWd~~~----------------~~~~~-~~~~l~sgs~Dg~i~iwd~~~   68 (557)
                      |...-..++|+-|   +.  |+.|+.-|.|+|.|+.+                +.+.| ..++++++|.|.+||+|++++
T Consensus        88 ~~Esfytcsw~yd~~~~~p~la~~G~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~  167 (385)
T KOG1034|consen   88 HDESFYTCSWSYDSNTGNPFLAAGGYLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQT  167 (385)
T ss_pred             CCcceEEEEEEecCCCCCeeEEeecceeEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccC
Confidence            6777788888754   33  77888999999999876                44444 357999999999999999999


Q ss_pred             CeEEEEE---cccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcE-------E-------------------E---EE
Q psy7057          69 QQCKLTI---RQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEF-------L-------------------K---TL  115 (557)
Q Consensus        69 ~~~~~~l---~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~-------~-------------------~---~l  115 (557)
                      ..++..+   .+|.+.|.++.|+.++ .|++++.|.+|++|++..+.       .                   .   +-
T Consensus       168 ~~Cv~VfGG~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~  247 (385)
T KOG1034|consen  168 DVCVAVFGGVEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFSTT  247 (385)
T ss_pred             CeEEEEecccccccCcEEEEEEcCCCCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCcccccccccccc
Confidence            9999887   5699999999999999 99999999999999954110       0                   0   11


Q ss_pred             eCCCCCEEEEEEeCCCeEEEEECCCeEEEEEC-CCCe-------------EEEEEeCCCCcEEEEEE----cCCEEEEEe
Q psy7057         116 TGHTDCVRGLAVLNDTDFVSCSNDASIRVWDS-TTGK-------------CVHTMYGHPNFIYSVAA----HGDLITSGG  177 (557)
Q Consensus       116 ~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~-~~~~-------------~~~~~~~h~~~V~~l~~----~~~~l~s~s  177 (557)
                      .-|...|-|+.|.. ..+++=|-++.|..|.. +-++             .+.++.-....|+-+.|    ..+.|+.|.
T Consensus       248 diHrnyVDCvrw~g-d~ilSkscenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~~~~la~gn  326 (385)
T KOG1034|consen  248 DIHRNYVDCVRWFG-DFILSKSCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDPWQKMLALGN  326 (385)
T ss_pred             ccccchHHHHHHHh-hheeecccCceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeecHHHHHHhhcc
Confidence            23666666666653 33668888889999986 2111             22333334456666666    456899999


Q ss_pred             CCCeEEEEECCCC-----ceEee--CCccEEEEEEcCCCc-EEEEEcCCcEEEEecC
Q psy7057         178 EDQCVCVYQNKAQ-----NSFMI--PAMSVWAVAILPNSD-IVTGSSDGIVRVFSAN  226 (557)
Q Consensus       178 ~Dg~I~iwd~~~~-----~~~~~--~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~  226 (557)
                      ..|.|.+||++..     .++..  ....|+..+|+.++. ++..++|++|--||.-
T Consensus       327 q~g~v~vwdL~~~ep~~~ttl~~s~~~~tVRQ~sfS~dgs~lv~vcdd~~Vwrwdrv  383 (385)
T KOG1034|consen  327 QSGKVYVWDLDNNEPPKCTTLTHSKSGSTVRQTSFSRDGSILVLVCDDGTVWRWDRV  383 (385)
T ss_pred             CCCcEEEEECCCCCCccCceEEeccccceeeeeeecccCcEEEEEeCCCcEEEEEee
Confidence            9999999997755     22322  234789999999999 7889999999999864

>KOG0650|consensus

Probab=99.55  E-value=5e-13  Score=136.63  Aligned_cols=223  Identities=17%  Similarity=0.209  Sum_probs=163.7

Q ss_pred             CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC---EEEEEECCC-------------------
Q psy7057          43 LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG---IIVTGCADK-------------------  100 (557)
Q Consensus        43 ~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~---~l~sgs~dg-------------------  100 (557)
                      ++..+.+..|++|+.||+||||.+.++.|+.++. ....|.|++|+|.+   .|+++-...                   
T Consensus       406 iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~-~d~~I~~vaw~P~~~~~vLAvA~~~~~~ivnp~~G~~~e~~~t~e  484 (733)
T KOG0650|consen  406 ISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQ-FDSEIRSVAWNPLSDLCVLAVAVGECVLIVNPIFGDRLEVGPTKE  484 (733)
T ss_pred             EEecCCcceeeecCCCCcEEEEEeecceEEEEEe-ecceeEEEEecCCCCceeEEEEecCceEEeCccccchhhhcchhh
Confidence            4556789999999999999999999999999887 45689999999965   444433333                   


Q ss_pred             -------------eEEEEeCC----C-cEEEEEeCCCCCEEEEEEeCCCeE-EEEEC---CCeEEEEECCCCeEEEEEeC
Q psy7057         101 -------------TIKLHSEE----G-EFLKTLTGHTDCVRGLAVLNDTDF-VSCSN---DASIRVWDSTTGKCVHTMYG  158 (557)
Q Consensus       101 -------------~I~vwd~~----~-~~~~~l~~h~~~V~~l~~~~~~~l-vs~s~---Dg~I~vwd~~~~~~~~~~~~  158 (557)
                                   .+..|...    . .-++....|...|+.|.|+..|.+ ++...   ...|.|.++...+...-|..
T Consensus       485 ll~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~VliHQLSK~~sQ~PF~k  564 (733)
T KOG0650|consen  485 LLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGNKSVLIHQLSKRKSQSPFRK  564 (733)
T ss_pred             hhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCCCcceEEEEecccccccCchhh
Confidence                         12233210    0 002233458889999999999874 44333   35688999887766666666


Q ss_pred             CCCcEEEEEEcCC--EEEEEeCCCeEEEEECCCC---ceEeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcch
Q psy7057         159 HPNFIYSVAAHGD--LITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAE  232 (557)
Q Consensus       159 h~~~V~~l~~~~~--~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~  232 (557)
                      ..+.|.++.|++.  +|++++ ...|++||+..+   +.+......|.+++++|.|. ++.|+.|+.+..||++-.... 
T Consensus       565 skG~vq~v~FHPs~p~lfVaT-q~~vRiYdL~kqelvKkL~tg~kwiS~msihp~GDnli~gs~d~k~~WfDldlsskP-  642 (733)
T KOG0650|consen  565 SKGLVQRVKFHPSKPYLFVAT-QRSVRIYDLSKQELVKKLLTGSKWISSMSIHPNGDNLILGSYDKKMCWFDLDLSSKP-  642 (733)
T ss_pred             cCCceeEEEecCCCceEEEEe-ccceEEEehhHHHHHHHHhcCCeeeeeeeecCCCCeEEEecCCCeeEEEEcccCcch-
Confidence            6788999999654  555555 468999997766   45555566899999999998 999999999999999865432 


Q ss_pred             hHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEe
Q psy7057         233 DAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFS  269 (557)
Q Consensus       233 ~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~  269 (557)
                      ...+..|...++.+.++..-+ .+++||.||++.||.
T Consensus       643 yk~lr~H~~avr~Va~H~ryP-Lfas~sdDgtv~Vfh  678 (733)
T KOG0650|consen  643 YKTLRLHEKAVRSVAFHKRYP-LFASGSDDGTVIVFH  678 (733)
T ss_pred             hHHhhhhhhhhhhhhhccccc-eeeeecCCCcEEEEe
Confidence            234445666777777766555 578999999999996

>KOG0290|consensus

Probab=99.53  E-value=1e-12  Score=123.82  Aligned_cols=244  Identities=15%  Similarity=0.155  Sum_probs=170.0

Q ss_pred             cEEEEEEcC--CC--cEEEEEC----CCcEEEEcCCC-------------------CCCCCC-----CCEEEEEECCCeE
Q psy7057          14 DVRSLSVTP--DG--CILSASR----DKSAKLWKPND-------------------LSPGAK-----VNTLLSASWDMTA   61 (557)
Q Consensus        14 ~V~~l~~sp--dg--~l~sgs~----Dg~V~iWd~~~-------------------~~~~~~-----~~~l~sgs~Dg~i   61 (557)
                      .+.++.|+.  +.  +|+.||.    .+.|.|-.+..                   +.+.|+     .++|+++  +..+
T Consensus        46 ~lya~~Ws~~~~~~~rla~gS~~Ee~~Nkvqiv~ld~~s~e~~~~a~fd~~YP~tK~~wiPd~~g~~pdlLATs--~D~L  123 (364)
T KOG0290|consen   46 PLYAMNWSVRPDKKFRLAVGSFIEEYNNKVQIVQLDEDSGELVEDANFDHPYPVTKLMWIPDSKGVYPDLLATS--SDFL  123 (364)
T ss_pred             ceeeeccccCCCcceeEEEeeeccccCCeeEEEEEccCCCceeccCCCCCCCCccceEecCCccccCcchhhcc--cCeE
Confidence            567788873  32  3777763    45566654433                   222222     2344443  3469


Q ss_pred             EEEECCCC--e--EEEEE-----cccCCcEEEEEEcCCC--EEEEEECCCeEEEEeCCC----cEEEEEeCCCCCEEEEE
Q psy7057          62 KLWCLESQ--Q--CKLTI-----RQHEMAVWGVIQLANG--IIVTGCADKTIKLHSEEG----EFLKTLTGHTDCVRGLA  126 (557)
Q Consensus        62 ~iwd~~~~--~--~~~~l-----~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~~~----~~~~~l~~h~~~V~~l~  126 (557)
                      |+|.+...  +  +...+     ..+..++++..|+.-.  +|.+.|-|.+..|||++.    .....|..|...|..++
T Consensus       124 RlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIa  203 (364)
T KOG0290|consen  124 RLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIA  203 (364)
T ss_pred             EEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeecccCeEEEEEEeeccccceeeEEEecCcceeEEE
Confidence            99998642  1  11222     2356788899998743  899999999999999433    34566788999999999


Q ss_pred             EeCCCe--EEEEECCCeEEEEECCCCeEEEEEe---CCCCcEEEEEE---cCCEEEEEeCC-CeEEEEECCCC----ceE
Q psy7057         127 VLNDTD--FVSCSNDASIRVWDSTTGKCVHTMY---GHPNFIYSVAA---HGDLITSGGED-QCVCVYQNKAQ----NSF  193 (557)
Q Consensus       127 ~~~~~~--lvs~s~Dg~I~vwd~~~~~~~~~~~---~h~~~V~~l~~---~~~~l~s~s~D-g~I~iwd~~~~----~~~  193 (557)
                      |...+.  |++++.||.+|+||+|..+....+.   ....+...+++   +.+++++-..| ..|.|.|++..    ..+
T Consensus       204 f~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P~tpva~L  283 (364)
T KOG0290|consen  204 FLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVPCTPVARL  283 (364)
T ss_pred             eccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEEecCCCcceehh
Confidence            998644  8899999999999999765433332   22567788888   56788877655 46889997755    678


Q ss_pred             eeCCccEEEEEEcCCCc--EEEEEcCCcEEEEecCCCCc-c--hhHHHhcccceeEEEeccCCCceeEEEE
Q psy7057         194 MIPAMSVWAVAILPNSD--IVTGSSDGIVRVFSANPDRQ-A--EDAVQAQYAEEVKKLKSANEQEIGGVKV  259 (557)
Q Consensus       194 ~~~~~~v~~v~~~p~g~--l~sg~~Dg~I~iwd~~~~~~-~--~~~~~~~~~~~v~~l~~~~~~~~~~vs~  259 (557)
                      ..|...|+.++|.|...  |.++|.|..+.|||+...-. .  .....-...++|..+.+.+..+..+..+
T Consensus       284 ~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~~~~~dPilay~a~~EVNqi~Ws~~~~Dwiai~  354 (364)
T KOG0290|consen  284 RNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPRENGEDPILAYTAGGEVNQIQWSSSQPDWIAIC  354 (364)
T ss_pred             hcCcccccceEecCCCCceeeecCCcceEEEEecccccccCCCCchhhhhccceeeeeeecccCCCEEEEE
Confidence            89999999999999876  99999999999999976433 1  1112222456788888877766655443

>KOG1310|consensus

Probab=99.53  E-value=4.9e-14  Score=142.49  Aligned_cols=204  Identities=24%  Similarity=0.315  Sum_probs=143.1

Q ss_pred             EEEEEeccCcccEEEEEEcCCCcEEEEECCCcEEEEcCCCCCCCCCCCEEEEEECCCeEEEEECCCCeEEEEE-cccCCc
Q psy7057           3 KLSTALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCLESQQCKLTI-RQHEMA   81 (557)
Q Consensus         3 kl~~~l~gH~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l-~~h~~~   81 (557)
                      .+.+.|.||++.|+|+.|+.+|.                         +|++||.|-.+.|||.-..++++.+ .+|...
T Consensus        41 ~lE~eL~GH~GCVN~LeWn~dG~-------------------------lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaN   95 (758)
T KOG1310|consen   41 DLEAELTGHTGCVNCLEWNADGE-------------------------LLASGSDDTRLIVWDPFEYKLLHSISTGHTAN   95 (758)
T ss_pred             chhhhhccccceecceeecCCCC-------------------------EEeecCCcceEEeecchhcceeeeeecccccc
Confidence            35678999999999999999865                         4444455555555555555555554 579999


Q ss_pred             EEEEEEcCC---CEEEEEECCCeEEEEeCCC-----------cEEEEEeCCCCCEEEEEEeCCC--eEEEEECCCeEEEE
Q psy7057          82 VWGVIQLAN---GIIVTGCADKTIKLHSEEG-----------EFLKTLTGHTDCVRGLAVLNDT--DFVSCSNDASIRVW  145 (557)
Q Consensus        82 V~~l~~~~~---~~l~sgs~dg~I~vwd~~~-----------~~~~~l~~h~~~V~~l~~~~~~--~lvs~s~Dg~I~vw  145 (557)
                      |.|+.|.|.   .++++|..|..|+++|++.           ..++.+..|...|..|+..|++  .|.+++.||+|+-+
T Consensus        96 IFsvKFvP~tnnriv~sgAgDk~i~lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQy  175 (758)
T KOG1310|consen   96 IFSVKFVPYTNNRIVLSGAGDKLIKLFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQY  175 (758)
T ss_pred             eeEEeeeccCCCeEEEeccCcceEEEEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeee
Confidence            999999993   3999999999999999542           2344566799999999999885  48899999999999


Q ss_pred             ECCCCe-EEEE------Ee-CCC--CcEEEEEE---cCCEEEEEeCCCeEEEEECCCC-------ce-----------E-
Q psy7057         146 DSTTGK-CVHT------MY-GHP--NFIYSVAA---HGDLITSGGEDQCVCVYQNKAQ-------NS-----------F-  193 (557)
Q Consensus       146 d~~~~~-~~~~------~~-~h~--~~V~~l~~---~~~~l~s~s~Dg~I~iwd~~~~-------~~-----------~-  193 (557)
                      |++... |-..      +. -+.  -...|+..   .+.+|++|+.|-..++||.+..       ..           . 
T Consensus       176 DiREph~c~p~~~~~~~l~ny~~~lielk~ltisp~rp~~laVGgsdpfarLYD~Rr~lks~~s~~~~~~~pp~~~~cv~  255 (758)
T KOG1310|consen  176 DIREPHVCNPDEDCPSILVNYNPQLIELKCLTISPSRPYYLAVGGSDPFARLYDRRRVLKSFRSDGTMNTCPPKDCRCVR  255 (758)
T ss_pred             cccCCccCCccccccHHHHHhchhhheeeeeeecCCCCceEEecCCCchhhhhhhhhhccCCCCCccccCCCCcccchhh
Confidence            998632 1111      11 011  23345555   5669999999999999992211       00           0 


Q ss_pred             ---eeCC-----------ccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcc
Q psy7057         194 ---MIPA-----------MSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQA  231 (557)
Q Consensus       194 ---~~~~-----------~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~  231 (557)
                         ..|.           ..++-++|+|+|. ++..-..-.|++|++...+..
T Consensus       256 yf~p~hlkn~~gn~~~~~~~~t~vtfnpNGtElLvs~~gEhVYlfdvn~~~~~  308 (758)
T KOG1310|consen  256 YFSPGHLKNSQGNLDRYITCCTYVTFNPNGTELLVSWGGEHVYLFDVNEDKSP  308 (758)
T ss_pred             eecCccccCcccccccceeeeEEEEECCCCcEEEEeeCCeEEEEEeecCCCCc
Confidence               0011           1256788999998 655555567999999876543

>KOG0290|consensus

Probab=99.53  E-value=1.1e-12  Score=123.64  Aligned_cols=212  Identities=15%  Similarity=0.199  Sum_probs=157.1

Q ss_pred             cCcccEEEEEEcCCCc-----EEEEECCCcEEEEcCCC-------------------------CCCC-CCCCEEEEEECC
Q psy7057          10 GHSMDVRSLSVTPDGC-----ILSASRDKSAKLWKPND-------------------------LSPG-AKVNTLLSASWD   58 (557)
Q Consensus        10 gH~~~V~~l~~spdg~-----l~sgs~Dg~V~iWd~~~-------------------------~~~~-~~~~~l~sgs~D   58 (557)
                      .|.-+++.+.|.|+..     |+ ++.+..+|+|.+..                         +.++ -+.++|.++|-|
T Consensus        94 d~~YP~tK~~wiPd~~g~~pdlL-ATs~D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiD  172 (364)
T KOG0290|consen   94 DHPYPVTKLMWIPDSKGVYPDLL-ATSSDFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSID  172 (364)
T ss_pred             CCCCCccceEecCCccccCcchh-hcccCeEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeeccc
Confidence            5888999999999862     33 33445799998873                         2222 245789999999


Q ss_pred             CeEEEEECCCCe---EEEEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEeCCCcEEEE--Ee-C-CCCCEEEEEEeC
Q psy7057          59 MTAKLWCLESQQ---CKLTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHSEEGEFLKT--LT-G-HTDCVRGLAVLN  129 (557)
Q Consensus        59 g~i~iwd~~~~~---~~~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~~~~~~~~--l~-~-h~~~V~~l~~~~  129 (557)
                      .+..|||++++.   ....|..|...|..++|..++  .+++.+.||.+|+||+....-.+  +. . ...+...++|++
T Consensus       173 TTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnk  252 (364)
T KOG0290|consen  173 TTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNK  252 (364)
T ss_pred             CeEEEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccCc
Confidence            999999999863   456788999999999999966  89999999999999954332211  22 2 246778888887


Q ss_pred             CCe--EEEE-ECCCeEEEEECCC-CeEEEEEeCCCCcEEEEEE---cCCEEEEEeCCCeEEEEECCCC-c-eE------e
Q psy7057         130 DTD--FVSC-SNDASIRVWDSTT-GKCVHTMYGHPNFIYSVAA---HGDLITSGGEDQCVCVYQNKAQ-N-SF------M  194 (557)
Q Consensus       130 ~~~--lvs~-s~Dg~I~vwd~~~-~~~~~~~~~h~~~V~~l~~---~~~~l~s~s~Dg~I~iwd~~~~-~-~~------~  194 (557)
                      ...  +++- -....|.+.|+|. ..++.++++|.+.|..++|   ....|.+|+.|..+.+||+.+. + ..      .
T Consensus       253 qDpnymATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~~~~~dPilay  332 (364)
T KOG0290|consen  253 QDPNYMATFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPRENGEDPILAY  332 (364)
T ss_pred             CCchHHhhhhcCCceEEEEEecCCCcceehhhcCcccccceEecCCCCceeeecCCcceEEEEecccccccCCCCchhhh
Confidence            632  5543 3446799999986 4688999999999999999   5568999999999999997654 2 11      1


Q ss_pred             eCCccEEEEEEcCCCc-EEEEEcCCcEEE
Q psy7057         195 IPAMSVWAVAILPNSD-IVTGSSDGIVRV  222 (557)
Q Consensus       195 ~~~~~v~~v~~~p~g~-l~sg~~Dg~I~i  222 (557)
                      .....|..+.|++... -++.+.++++.+
T Consensus       333 ~a~~EVNqi~Ws~~~~Dwiai~~~kklei  361 (364)
T KOG0290|consen  333 TAGGEVNQIQWSSSQPDWIAICFGKKLEI  361 (364)
T ss_pred             hccceeeeeeecccCCCEEEEEecCeeeE
Confidence            2346799999997644 444445555544

>KOG1523|consensus

Probab=99.51  E-value=2.6e-12  Score=122.74  Aligned_cols=211  Identities=15%  Similarity=0.165  Sum_probs=162.9

Q ss_pred             EeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC-------------------CCCCCCCCEEEEEECCCeEEEEEC
Q psy7057           7 ALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND-------------------LSPGAKVNTLLSASWDMTAKLWCL   66 (557)
Q Consensus         7 ~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~-------------------~~~~~~~~~l~sgs~Dg~i~iwd~   66 (557)
                      .+.--..+|+|.+|++|+. ++.+.....|.||....                   +.+.+..+.|++|+.|....+|..
T Consensus         5 ~~~~~~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~   84 (361)
T KOG1523|consen    5 VFHRLLEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQ   84 (361)
T ss_pred             EeeeccCceeeeeecCCCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCcccccc
Confidence            3444457999999999998 88888888999997655                   678888999999999999999998


Q ss_pred             CC-C--eEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcEE-----EEEeCCCCCEEEEEEeCCCe-EEEE
Q psy7057          67 ES-Q--QCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFL-----KTLTGHTDCVRGLAVLNDTD-FVSC  136 (557)
Q Consensus        67 ~~-~--~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~-----~~l~~h~~~V~~l~~~~~~~-lvs~  136 (557)
                      .. +  ++...|..++...+++.|+|.. .|++||.-..|.||-.+++.-     +.-+.+.+.|.++.|+|++- +++|
T Consensus        85 ~~~~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVLlaaG  164 (361)
T KOG1523|consen   85 PSGGTWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLAAG  164 (361)
T ss_pred             CCCCeeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhCCccccceeeeeccCCcceeccc
Confidence            33 3  4666777799999999999977 999999999999987555432     23456788899999999987 5589


Q ss_pred             ECCCeEEEEECC------------------CCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC----ce
Q psy7057         137 SNDASIRVWDST------------------TGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ----NS  192 (557)
Q Consensus       137 s~Dg~I~vwd~~------------------~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~----~~  192 (557)
                      |.|+..|++..-                  -|..+.++....+.+..+.|  +|..|+-.+.|.++.+-|....    +.
T Consensus       165 s~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~lawv~Hds~v~~~da~~p~~~v~~  244 (361)
T KOG1523|consen  165 STDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNRLAWVGHDSTVSFVDAAGPSERVQS  244 (361)
T ss_pred             ccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCCEeeEecCCCceEEeecCCCchhccc
Confidence            999999998631                  12334444456788999999  6889999999999999984332    33


Q ss_pred             EeeCCccEEEEEEcCCCcEEEEEcC
Q psy7057         193 FMIPAMSVWAVAILPNSDIVTGSSD  217 (557)
Q Consensus       193 ~~~~~~~v~~v~~~p~g~l~sg~~D  217 (557)
                      +.....+..++.|..+..++.++.|
T Consensus       245 ~~~~~lP~ls~~~ise~~vv~ag~~  269 (361)
T KOG1523|consen  245 VATAQLPLLSVSWISENSVVAAGYD  269 (361)
T ss_pred             hhhccCCceeeEeecCCceeecCCC
Confidence            3333456777777666555555555

>KOG4227|consensus

Probab=99.50  E-value=8.3e-13  Score=128.68  Aligned_cols=264  Identities=12%  Similarity=0.103  Sum_probs=183.7

Q ss_pred             EEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC-----------------------CCCCCCCCEEEEEECCCeE
Q psy7057           6 TALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND-----------------------LSPGAKVNTLLSASWDMTA   61 (557)
Q Consensus         6 ~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~-----------------------~~~~~~~~~l~sgs~Dg~i   61 (557)
                      +.+.+|.+.|++|.|+.+++ |++|+.|..+++|++..                       +.++.....+.+|..+++|
T Consensus        50 KD~~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~V  129 (609)
T KOG4227|consen   50 KDVREHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTV  129 (609)
T ss_pred             hhhhhhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCccee
Confidence            34678999999999999999 89999999999999865                       4556667789999999999


Q ss_pred             EEEECCCCeEEEEEcc--cCCcEEEEEEcC-CCEEEEEECCCeEEEEeCCCcE----EEEEeCCCCCEEEEEEeCCC--e
Q psy7057          62 KLWCLESQQCKLTIRQ--HEMAVWGVIQLA-NGIIVTGCADKTIKLHSEEGEF----LKTLTGHTDCVRGLAVLNDT--D  132 (557)
Q Consensus        62 ~iwd~~~~~~~~~l~~--h~~~V~~l~~~~-~~~l~sgs~dg~I~vwd~~~~~----~~~l~~h~~~V~~l~~~~~~--~  132 (557)
                      .+-|+++.+.+..+..  ..+.|..+..+| ++.+++.+.++.|.+||....+    ...+........++.|+|..  .
T Consensus       130 I~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F~P~~P~L  209 (609)
T KOG4227|consen  130 IKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPANSGKNFYTAEFHPETPAL  209 (609)
T ss_pred             EeeecccceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceeeecCCCccceeeeecCCCcee
Confidence            9999999887777652  234899999999 5599999999999999933221    22333455678888999873  3


Q ss_pred             EEEEECCCeEEEEECCCCe-EEEEE---eCCC---CcEEEEEE--cCCEEEEEeCCCeEEEEECCCC--ceEee-C----
Q psy7057         133 FVSCSNDASIRVWDSTTGK-CVHTM---YGHP---NFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ--NSFMI-P----  196 (557)
Q Consensus       133 lvs~s~Dg~I~vwd~~~~~-~~~~~---~~h~---~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~--~~~~~-~----  196 (557)
                      |++.+..+-+-+||++... ++...   .+-.   ..-.++.|  +|..|++--....-.+||..+.  -.++. |    
T Consensus       210 i~~~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~msiRR~~~P~~~D~~S~R~~V~k~D~N~~G  289 (609)
T KOG4227|consen  210 ILVNSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPSGNQFMSIRRGKCPLYFDFISQRCFVLKSDHNPNG  289 (609)
T ss_pred             EEeccccCCCCceeeccccchHHhhhccccCcccchhhhheeeCCCCCeehhhhccCCCEEeeeecccceeEeccCCCCc
Confidence            6688888999999987542 22211   1111   12244555  6677777766666677885543  22221 1    


Q ss_pred             ---CccEEEEEEcCCCcEEEEEcCCcEEEEecCCCCcchh---------------------HHHhcccceeEEEeccCCC
Q psy7057         197 ---AMSVWAVAILPNSDIVTGSSDGIVRVFSANPDRQAED---------------------AVQAQYAEEVKKLKSANEQ  252 (557)
Q Consensus       197 ---~~~v~~v~~~p~g~l~sg~~Dg~I~iwd~~~~~~~~~---------------------~~~~~~~~~v~~l~~~~~~  252 (557)
                         ...+.+++|..+..+++|+.+=.|++|.+.......-                     ..+.+|...+..+.+.+. 
T Consensus       290 Y~N~~T~KS~~F~~D~~v~tGSD~~~i~~WklP~~~ds~G~~~IG~~~~~~~~~~~i~~~~~VLrGHRSv~NQVRF~~H-  368 (609)
T KOG4227|consen  290 YCNIKTIKSMTFIDDYTVATGSDHWGIHIWKLPRANDSYGFTQIGHDEEEMPSEIFIEKELTVLRGHRSVPNQVRFSQH-  368 (609)
T ss_pred             ceeeeeeeeeeeecceeeeccCcccceEEEecCCCccccCccccCcchhhCchhheecceeEEEecccccccceeecCC-
Confidence               1357788998888899999999999999854321111                     111233333334444333 


Q ss_pred             ceeEEEEeCCCcEEEEec
Q psy7057         253 EIGGVKVSDDGIVRVFSA  270 (557)
Q Consensus       253 ~~~~vs~s~DG~IrvW~~  270 (557)
                      ...+++.+-...++||+-
T Consensus       369 ~~~l~SSGVE~~~KlWS~  386 (609)
T KOG4227|consen  369 NNLLVSSGVENSFKLWSD  386 (609)
T ss_pred             cceEeccchhhheecccc
Confidence            334667777889999973

>KOG0644|consensus

Probab=99.47  E-value=5.5e-14  Score=148.23  Aligned_cols=223  Identities=18%  Similarity=0.216  Sum_probs=174.3

Q ss_pred             CCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCC
Q psy7057          44 SPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDC  121 (557)
Q Consensus        44 ~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~  121 (557)
                      .++..+.++++|+.|..++||..+++.++.+.+||...|+.++.+..+ .++++|.|..|++|. ..+.++..+.+|++.
T Consensus       197 ~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~~~pvsvLrghtga  276 (1113)
T KOG0644|consen  197 IFDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLPDGAPVSVLRGHTGA  276 (1113)
T ss_pred             eeccccceEeecCccceeeeeeccchhhhccCCCCccccchhccchhhhhhhhcccCceEEEEecCCCchHHHHhccccc
Confidence            466789999999999999999999999999999999999999999888 899999999999999 678889999999999


Q ss_pred             EEEEEEeCCCeEEEEECCCeEEEEECCCCeEEEEEe-----CCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCCceEe
Q psy7057         122 VRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMY-----GHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQNSFM  194 (557)
Q Consensus       122 V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~~~~~~~-----~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~~~~~  194 (557)
                      |++++|+|-.   +.+.||++++||.+ ..++....     .....+.++.+  .+..++|++.|+.-..|....+.   
T Consensus       277 vtaiafsP~~---sss~dgt~~~wd~r-~~~~~y~prp~~~~~~~~~~s~~~~~~~~~f~Tgs~d~ea~n~e~~~l~---  349 (1113)
T KOG0644|consen  277 VTAIAFSPRA---SSSDDGTCRIWDAR-LEPRIYVPRPLKFTEKDLVDSILFENNGDRFLTGSRDGEARNHEFEQLA---  349 (1113)
T ss_pred             eeeeccCccc---cCCCCCceEecccc-ccccccCCCCCCcccccceeeeeccccccccccccCCcccccchhhHhh---
Confidence            9999999854   88999999999987 22221110     12345556666  56789999999999888754330   


Q ss_pred             eCCccEEEEEEcCCCc--EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCC
Q psy7057         195 IPAMSVWAVAILPNSD--IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANP  272 (557)
Q Consensus       195 ~~~~~v~~v~~~p~g~--l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~  272 (557)
                      .+...+.-+..+.+..  .+++-.+-.+.+|++.++...  .....|...+..+.+++.++....+++.||...|||+-.
T Consensus       350 ~~~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g~l~--H~l~ghsd~~yvLd~Hpfn~ri~msag~dgst~iwdi~e  427 (1113)
T KOG0644|consen  350 WRSNLLIFVTRSSDLSSIVVTARNDHRLCVWNLYTGQLL--HNLMGHSDEVYVLDVHPFNPRIAMSAGYDGSTIIWDIWE  427 (1113)
T ss_pred             hhccceEEEeccccccccceeeeeeeEeeeeecccchhh--hhhcccccceeeeeecCCCcHhhhhccCCCceEeeeccc
Confidence            0111111122222222  567778888999999887654  344567788888999999998889999999999999887


Q ss_pred             Chh
Q psy7057         273 DRQ  275 (557)
Q Consensus       273 ~~~  275 (557)
                      +-.
T Consensus       428 g~p  430 (1113)
T KOG0644|consen  428 GIP  430 (1113)
T ss_pred             CCc
Confidence            644

>KOG1009|consensus

Probab=99.46  E-value=5.3e-12  Score=124.07  Aligned_cols=228  Identities=19%  Similarity=0.219  Sum_probs=160.7

Q ss_pred             EEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC--------------------------------CCCCCCC
Q psy7057           3 KLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND--------------------------------LSPGAKV   49 (557)
Q Consensus         3 kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~--------------------------------~~~~~~~   49 (557)
                      +....|.+|...|+++.|+|+|. |+||+.+|.|.+|....                                ++|.+++
T Consensus        56 ~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~  135 (434)
T KOG1009|consen   56 EYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDS  135 (434)
T ss_pred             EEeecccCCcceeEEEEEcCCcCeeeecCCCceEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCC
Confidence            45678999999999999999998 88999999999997661                                7889999


Q ss_pred             CEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCc----EEE--EE---eC--
Q psy7057          50 NTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGE----FLK--TL---TG--  117 (557)
Q Consensus        50 ~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~----~~~--~l---~~--  117 (557)
                      .++++++.|.++++||+..|.....+..|...|..++|.|.+ .+++-+.|...+.+....+    .+.  .+   ..  
T Consensus       136 ~~l~s~s~dns~~l~Dv~~G~l~~~~~dh~~yvqgvawDpl~qyv~s~s~dr~~~~~~~~~~~~~~~~~~~~m~~~~~~~  215 (434)
T KOG1009|consen  136 NFLVSGSVDNSVRLWDVHAGQLLAILDDHEHYVQGVAWDPLNQYVASKSSDRHPEGFSAKLKQVIKRHGLDIMPAKAFNE  215 (434)
T ss_pred             ceeeeeeccceEEEEEeccceeEeeccccccccceeecchhhhhhhhhccCcccceeeeeeeeeeeeeeeeEeeecccCC
Confidence            999999999999999999999999999999999999999977 7888888876665542111    111  00   00  


Q ss_pred             ---------CC----CCEEEEEEeCCCeEE-EEE----CCC-----eEEEEECCC-CeEEEEEeCCCCcEEEEEE-----
Q psy7057         118 ---------HT----DCVRGLAVLNDTDFV-SCS----NDA-----SIRVWDSTT-GKCVHTMYGHPNFIYSVAA-----  168 (557)
Q Consensus       118 ---------h~----~~V~~l~~~~~~~lv-s~s----~Dg-----~I~vwd~~~-~~~~~~~~~h~~~V~~l~~-----  168 (557)
                               |.    .-.+.++|+|+|.++ +.+    ..+     +.++++-.. .++...+.+...++..+.+     
T Consensus       216 ~e~~s~rLfhDeTlksFFrRlsfTPdG~llvtPag~~~~g~~~~~n~tYvfsrk~l~rP~~~lp~~~k~~lavr~~pVy~  295 (434)
T KOG1009|consen  216 REGKSTRLFHDETLKSFFRRLSFTPDGSLLVTPAGLFKVGGGVFRNTSYVFSRKDLKRPAARLPSPKKPALAVRFSPVYY  295 (434)
T ss_pred             CCcceeeeeecCchhhhhhhcccCCCCcEEEcccceeeeCCceeeceeEeeccccccCceeecCCCCcceEEEEeeeeEE
Confidence                     11    224556778887744 321    112     233443211 2233344333333333222     


Q ss_pred             -----c---------CCEEEEEeCCCeEEEEECCCCc----eEeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCC
Q psy7057         169 -----H---------GDLITSGGEDQCVCVYQNKAQN----SFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDR  229 (557)
Q Consensus       169 -----~---------~~~l~s~s~Dg~I~iwd~~~~~----~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~  229 (557)
                           +         -+.++.......|++||...+.    .-..|-..|+.++|+++|. ++..+.||...+-.++..+
T Consensus       296 elrp~~~~~~~~~lpyrlvfaiAt~~svyvydtq~~~P~~~v~nihy~~iTDiaws~dg~~l~vSS~DGyCS~vtfe~~e  375 (434)
T KOG1009|consen  296 ELRPLSSEKFLFVLPYRLVFAIATKNSVYVYDTQTLEPLAVVDNIHYSAITDIAWSDDGSVLLVSSTDGFCSLVTFEPWE  375 (434)
T ss_pred             EeccccccccccccccceEEEEeecceEEEeccccccceEEEeeeeeeeecceeecCCCcEEEEeccCCceEEEEEcchh
Confidence                 0         1223344445689999988763    3345778999999999999 8899999999888887654


Q ss_pred             c
Q psy7057         230 Q  230 (557)
Q Consensus       230 ~  230 (557)
                      +
T Consensus       376 l  376 (434)
T KOG1009|consen  376 L  376 (434)
T ss_pred             c
Confidence            4

>KOG1009|consensus

Probab=99.45  E-value=8.4e-13  Score=129.62  Aligned_cols=158  Identities=26%  Similarity=0.385  Sum_probs=126.3

Q ss_pred             cccEEEEEEcCCCc--EEEEECCCcEEEEcCCCCCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcC
Q psy7057          12 SMDVRSLSVTPDGC--ILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLA   89 (557)
Q Consensus        12 ~~~V~~l~~spdg~--l~sgs~Dg~V~iWd~~~~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~   89 (557)
                      ..+|..+.|.++..  |+||+.|..|+||.++.-.....         +.+        -+....|..|...|+++.|+|
T Consensus        13 ~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~---------~~~--------V~y~s~Ls~H~~aVN~vRf~p   75 (434)
T KOG1009|consen   13 HEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGG---------DMK--------VEYLSSLSRHTRAVNVVRFSP   75 (434)
T ss_pred             CCceEEEEeccCcccceecccCccceeeeeeeecCCCCC---------cee--------EEEeecccCCcceeEEEEEcC
Confidence            35889999988653  78888888888886654222211         111        134567888999999999999


Q ss_pred             CC-EEEEEECCCeEEEEeCC--------C---------cEEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEEEEECCCC
Q psy7057          90 NG-IIVTGCADKTIKLHSEE--------G---------EFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTG  150 (557)
Q Consensus        90 ~~-~l~sgs~dg~I~vwd~~--------~---------~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~  150 (557)
                      +| +++||+.+|.+.+|-..        .         ...+.+.+|...|..++|+|++. +++++-|.++++||+..|
T Consensus        76 ~gelLASg~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G  155 (434)
T KOG1009|consen   76 DGELLASGGDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAG  155 (434)
T ss_pred             CcCeeeecCCCceEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEeccc
Confidence            99 99999999999999733        1         12456778999999999999988 559999999999999999


Q ss_pred             eEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEE
Q psy7057         151 KCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQ  186 (557)
Q Consensus       151 ~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd  186 (557)
                      ..+..+..|...+..++|  .+.++++-+.|...+.+.
T Consensus       156 ~l~~~~~dh~~yvqgvawDpl~qyv~s~s~dr~~~~~~  193 (434)
T KOG1009|consen  156 QLLAILDDHEHYVQGVAWDPLNQYVASKSSDRHPEGFS  193 (434)
T ss_pred             eeEeeccccccccceeecchhhhhhhhhccCcccceee
Confidence            999999999999999999  456888888888666665

>KOG2110|consensus

Probab=99.45  E-value=4.3e-11  Score=116.56  Aligned_cols=212  Identities=14%  Similarity=0.210  Sum_probs=155.2

Q ss_pred             CcccEEEEEEcCCCcEE-EEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECC--CeEEEEECCCCeE
Q psy7057          11 HSMDVRSLSVTPDGCIL-SASRDKSAKLWKPND----------------LSPGAKVNTLLSASWD--MTAKLWCLESQQC   71 (557)
Q Consensus        11 H~~~V~~l~~spdg~l~-sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~D--g~i~iwd~~~~~~   71 (557)
                      -...+..+.|+.+..++ .|+.|| -++++.+.                +-++  ..+++..+.+  +.+++.+.+.+..
T Consensus         4 ~~~ti~~~~~Nqd~~~lsvGs~~G-yk~~~~~~~~k~~~~~~~~~~IvEmLFS--SSLvaiV~~~qpr~Lkv~~~Kk~~~   80 (391)
T KOG2110|consen    4 KKPTINFIGFNQDSTLLSVGSKDG-YKIFSCSPFEKCFSKDTEGVSIVEMLFS--SSLVAIVSIKQPRKLKVVHFKKKTT   80 (391)
T ss_pred             CCcceeeeeeccceeEEEccCCCc-eeEEecCchHHhhcccCCCeEEEEeecc--cceeEEEecCCCceEEEEEcccCce
Confidence            34567788898888855 455555 57777665                1122  2345554444  4488888887776


Q ss_pred             EEEEcccCCcEEEEEEcCCCEEEEEECCCeEEEEe-CCCcEEEEEe---CCCCCEEEEEEeCCCe-EE--EEECCCeEEE
Q psy7057          72 KLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHS-EEGEFLKTLT---GHTDCVRGLAVLNDTD-FV--SCSNDASIRV  144 (557)
Q Consensus        72 ~~~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd-~~~~~~~~l~---~h~~~V~~l~~~~~~~-lv--s~s~Dg~I~v  144 (557)
                      +..+. ....|.++.++.+.+++.--  ..|.|+| .+.++++++.   .+...++++++++.+. ++  .....|.|.+
T Consensus        81 ICe~~-fpt~IL~VrmNr~RLvV~Le--e~IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l  157 (391)
T KOG2110|consen   81 ICEIF-FPTSILAVRMNRKRLVVCLE--ESIYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGDVVL  157 (391)
T ss_pred             EEEEe-cCCceEEEEEccceEEEEEc--ccEEEEecccceeehhhhccCCCccceEeeccCCCCceEEecCCCCCceEEE
Confidence            66665 46788899988776555433  3399999 4566777665   3556677777776655 33  3445689999


Q ss_pred             EECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCe-EEEEECCCCceEeeC-----CccEEEEEEcCCCc-EEEEE
Q psy7057         145 WDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQC-VCVYQNKAQNSFMIP-----AMSVWAVAILPNSD-IVTGS  215 (557)
Q Consensus       145 wd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~-I~iwd~~~~~~~~~~-----~~~v~~v~~~p~g~-l~sg~  215 (557)
                      ||+.+-+++..+..|.+.+.+++|  +|.+|+++|+.|+ ||||...+.+.+...     ...|++++|+|+++ |.+.+
T Consensus       158 ~d~~nl~~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS  237 (391)
T KOG2110|consen  158 FDTINLQPVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQFLAASS  237 (391)
T ss_pred             EEcccceeeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCceeeEEEEEEECCCCCeEEEec
Confidence            999999999999999999999999  7889999999997 689998777444332     23689999999999 66777


Q ss_pred             cCCcEEEEecCCC
Q psy7057         216 SDGIVRVFSANPD  228 (557)
Q Consensus       216 ~Dg~I~iwd~~~~  228 (557)
                      +.++|+||.++..
T Consensus       238 ~TeTVHiFKL~~~  250 (391)
T KOG2110|consen  238 NTETVHIFKLEKV  250 (391)
T ss_pred             CCCeEEEEEeccc
Confidence            8899999998754

>KOG1272|consensus

Probab=99.44  E-value=5.1e-13  Score=133.05  Aligned_cols=254  Identities=11%  Similarity=0.128  Sum_probs=189.7

Q ss_pred             EEEEEcCCCc-EEEEECCCcEEEEcCCC---------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccC
Q psy7057          16 RSLSVTPDGC-ILSASRDKSAKLWKPND---------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHE   79 (557)
Q Consensus        16 ~~l~~spdg~-l~sgs~Dg~V~iWd~~~---------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~   79 (557)
                      ..+.++.+|+ |+.|++.|.|-.+|+.+               +.+-.+.+ +++.....-+.||| ..|..++.++.|.
T Consensus       133 Y~~~ytrnGrhlllgGrKGHlAa~Dw~t~~L~~Ei~v~Etv~Dv~~LHneq-~~AVAQK~y~yvYD-~~GtElHClk~~~  210 (545)
T KOG1272|consen  133 YHLDYTRNGRHLLLGGRKGHLAAFDWVTKKLHFEINVMETVRDVTFLHNEQ-FFAVAQKKYVYVYD-NNGTELHCLKRHI  210 (545)
T ss_pred             eeeeecCCccEEEecCCccceeeeecccceeeeeeehhhhhhhhhhhcchH-HHHhhhhceEEEec-CCCcEEeehhhcC
Confidence            5678889998 99999999999999887               23332333 44445667899999 5678888888654


Q ss_pred             CcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCeEE-EEECCCeEEEEECCCCeEEEEE
Q psy7057          80 MAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTDFV-SCSNDASIRVWDSTTGKCVHTM  156 (557)
Q Consensus        80 ~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~lv-s~s~Dg~I~vwd~~~~~~~~~~  156 (557)
                       .|..+.|.|.. +|++++..|.++.-| ..|+.+..+..-.+.+..|+-.|-+-++ +|...|+|.+|.....+++..+
T Consensus       211 -~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP~skePLvKi  289 (545)
T KOG1272|consen  211 -RVARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWSPNSKEPLVKI  289 (545)
T ss_pred             -chhhhcccchhheeeecccCCceEEEeechhhhhHHHHccCCccchhhcCCccceEEEcCCCceEEecCCCCcchHHHH
Confidence             68899999988 888999999999999 5788888888788889999999987766 8999999999999999999889


Q ss_pred             eCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCCceEee-C-CccEEEEEEcCCCcEEEEEcCCcEEEEecCCC---C
Q psy7057         157 YGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQNSFMI-P-AMSVWAVAILPNSDIVTGSSDGIVRVFSANPD---R  229 (557)
Q Consensus       157 ~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~~~~~~-~-~~~v~~v~~~p~g~l~sg~~Dg~I~iwd~~~~---~  229 (557)
                      ..|.++|.+|++  .|.+++|.+.|..++|||++....+.. + ..+...+++|..| +++++....|.||.-...   .
T Consensus       290 LcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~tp~~a~~ls~Sqkg-lLA~~~G~~v~iw~d~~~~s~~  368 (545)
T KOG1272|consen  290 LCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRTPHPASNLSLSQKG-LLALSYGDHVQIWKDALKGSGH  368 (545)
T ss_pred             HhcCCCcceEEECCCCcEEeecccccceeEeeeccccccceeecCCCcccccccccc-ceeeecCCeeeeehhhhcCCCC
Confidence            999999999999  688999999999999999887733222 2 2467788888776 666677778999963221   2


Q ss_pred             cchhHHHhcccceeEEEeccCCCce-----------eEEEEeCCCcEEEEecCCC
Q psy7057         230 QAEDAVQAQYAEEVKKLKSANEQEI-----------GGVKVSDDGIVRVFSANPD  273 (557)
Q Consensus       230 ~~~~~~~~~~~~~v~~l~~~~~~~~-----------~~vs~s~DG~IrvW~~~~~  273 (557)
                      .............|..+.+++...+           .+|=||.|-..--|..+|-
T Consensus       369 ~~~pYm~H~~~~~V~~l~FcP~EDvLGIGH~~G~tsilVPGsGePN~Ds~e~nPf  423 (545)
T KOG1272|consen  369 GETPYMNHRCGGPVEDLRFCPYEDVLGIGHAGGITSILVPGSGEPNYDSLEDNPF  423 (545)
T ss_pred             CCcchhhhccCcccccceeccHHHeeeccccCCceeEeccCCCCCCcchhccCcc
Confidence            2222333334446666666665443           2344555555555555553

>KOG1963|consensus

Probab=99.41  E-value=2.2e-11  Score=130.16  Aligned_cols=264  Identities=13%  Similarity=0.171  Sum_probs=168.0

Q ss_pred             cCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC--------------------CCCCCCCCEEEEEECCCeEEEEECCC
Q psy7057          10 GHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND--------------------LSPGAKVNTLLSASWDMTAKLWCLES   68 (557)
Q Consensus        10 gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~--------------------~~~~~~~~~l~sgs~Dg~i~iwd~~~   68 (557)
                      .|.-.++|.+++|.++ +++|..||.|.+|.-..                    ++++.+|.+|++|++.|.+.+|.+++
T Consensus       203 ~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T  282 (792)
T KOG1963|consen  203 HHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLET  282 (792)
T ss_pred             hhcccceeEEeccccceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEecCCceEeecccceEEEEEeecC
Confidence            3777799999999999 88999999999995322                    67888999999999999999999999


Q ss_pred             CeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeC-CCcEEEEEeC-----------CCCCEEEEEEeCC-CeEE
Q psy7057          69 QQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSE-EGEFLKTLTG-----------HTDCVRGLAVLND-TDFV  134 (557)
Q Consensus        69 ~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~-~~~~~~~l~~-----------h~~~V~~l~~~~~-~~lv  134 (557)
                      ++ ..-|..-.++|..+.++|++ ..+....|+.|.+... +.....++.+           ..+-.+.+++.|. +.++
T Consensus       283 ~~-kqfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~~k~tIsgi~~~~~~~k~~~~~l~t~~~idpr~~~~v  361 (792)
T KOG1963|consen  283 GK-KQFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASDLEIKSTISGIKPPTPSTKTRPQSLTTGVSIDPRTNSLV  361 (792)
T ss_pred             CC-cccccccCCeeEEEEEcCCCCeEEEEecCceEEEEeccchhhhhhccCccCCCccccccccccceeEEEcCCCCcee
Confidence            87 44455568899999999999 7777888999998763 2111111111           1222344444442 2344


Q ss_pred             EEECCCeEEEEECCCCeEEEE-----------------------------------------------------------
Q psy7057         135 SCSNDASIRVWDSTTGKCVHT-----------------------------------------------------------  155 (557)
Q Consensus       135 s~s~Dg~I~vwd~~~~~~~~~-----------------------------------------------------------  155 (557)
                      -.+..+.|.+||+.+.+.+..                                                           
T Consensus       362 ln~~~g~vQ~ydl~td~~i~~~~v~~~n~~~~~~n~~v~itav~~~~~gs~maT~E~~~d~~~~~~~e~~LKFW~~n~~~  441 (792)
T KOG1963|consen  362 LNGHPGHVQFYDLYTDSTIYKLQVCDENYSDGDVNIQVGITAVARSRFGSWMATLEARIDKFNFFDGEVSLKFWQYNPNS  441 (792)
T ss_pred             ecCCCceEEEEeccccceeeeEEEEeecccCCcceeEEeeeeehhhccceEEEEeeeeehhhhccCceEEEEEEEEcCCc
Confidence            444444455444432211111                                                           


Q ss_pred             ---------EeCCCCcEEEEEE----cCCEEEEEeCCCeEEEEECC------CC------ceE-eeCCccEEEEEEcCCC
Q psy7057         156 ---------MYGHPNFIYSVAA----HGDLITSGGEDQCVCVYQNK------AQ------NSF-MIPAMSVWAVAILPNS  209 (557)
Q Consensus       156 ---------~~~h~~~V~~l~~----~~~~l~s~s~Dg~I~iwd~~------~~------~~~-~~~~~~v~~v~~~p~g  209 (557)
                               ...|...+.+.++    .....++++.||.+++|-..      ..      ..+ ..|..++.+++|+.||
T Consensus       442 kt~~L~T~I~~PH~~~~vat~~~~~~rs~~~vta~~dg~~KiW~~~~~~n~~k~~s~W~c~~i~sy~k~~i~a~~fs~dG  521 (792)
T KOG1963|consen  442 KTFILNTKINNPHGNAFVATIFLNPTRSVRCVTASVDGDFKIWVFTDDSNIYKKSSNWTCKAIGSYHKTPITALCFSQDG  521 (792)
T ss_pred             ceeEEEEEEecCCCceeEEEEEecCcccceeEEeccCCeEEEEEEecccccCcCccceEEeeeeccccCcccchhhcCCC
Confidence                     1235444444444    22378999999999999741      11      111 1256789999999999


Q ss_pred             cEEEEEcCCcEEEEecCCC-CcchhHHHhcccceeEEEeccC-CCceeEEEEeCCCcEEEEecCCChhh
Q psy7057         210 DIVTGSSDGIVRVFSANPD-RQAEDAVQAQYAEEVKKLKSAN-EQEIGGVKVSDDGIVRVFSANPDRQA  276 (557)
Q Consensus       210 ~l~sg~~Dg~I~iwd~~~~-~~~~~~~~~~~~~~v~~l~~~~-~~~~~~vs~s~DG~IrvW~~~~~~~~  276 (557)
                      .+++.+.|++|.+||..+. ..........  ..+..+.+.. ......+....-+.+.+|++-.....
T Consensus       522 slla~s~~~~Itiwd~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~WNll~~~l~  588 (792)
T KOG1963|consen  522 SLLAVSFDDTITIWDYDTKNELLCTEGSRN--WPIAELLFTAQTQNDGALVHATQQRLSVWNLLSMSLI  588 (792)
T ss_pred             cEEEEecCCEEEEecCCChhhhhccccccc--cchHhHhhhcccccccceeeccCceEehHhhhhhhee
Confidence            9999999999999999873 2211111111  1111111111 11112244456678888887665443

>KOG0642|consensus

Probab=99.41  E-value=3.3e-12  Score=130.24  Aligned_cols=211  Identities=18%  Similarity=0.187  Sum_probs=145.3

Q ss_pred             cEEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCCCCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCC
Q psy7057           2 YKLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEM   80 (557)
Q Consensus         2 ~kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~   80 (557)
                      ++.+.+|++|.++|.|+++.+++. +++|+-||+|+.|++. ...+++..             +|.  .....++.||.+
T Consensus       334 ~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I~~w~~p-~n~dp~ds-------------~dp--~vl~~~l~Ghtd  397 (577)
T KOG0642|consen  334 VEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTIRCWNLP-PNQDPDDS-------------YDP--SVLSGTLLGHTD  397 (577)
T ss_pred             eeeeEEEecccCceEEEEecCCceEEEeeccCceeeeeccC-CCCCcccc-------------cCc--chhccceecccc
Confidence            456788999999999999999988 8899999999999875 22222111             111  123456889999


Q ss_pred             cEEEEEEcCCC-EEEEEECCCeEEEEeCCCcEEEEEeCC--CCCEEEEEEeCCC-e-EEEEECCCeEEEEECCCCeEEEE
Q psy7057          81 AVWGVIQLANG-IIVTGCADKTIKLHSEEGEFLKTLTGH--TDCVRGLAVLNDT-D-FVSCSNDASIRVWDSTTGKCVHT  155 (557)
Q Consensus        81 ~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~~~l~~h--~~~V~~l~~~~~~-~-lvs~s~Dg~I~vwd~~~~~~~~~  155 (557)
                      .|+.+++++.. .|++++.||+++.|+.......++..-  .....++.+-... . .++...-+.-.+.++.....+..
T Consensus       398 avw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~~~f~~~~e~g~Plsvd~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~  477 (577)
T KOG0642|consen  398 AVWLLALSSTKDRLLSCSSDGTVRLWEPTEESPCTFGEPKEHGYPLSVDRTSSRPAHSLASFRFGYTSIDDMEVVSDLLI  477 (577)
T ss_pred             ceeeeeecccccceeeecCCceEEeeccCCcCccccCCccccCCcceEeeccchhHhhhhhcccccccchhhhhhhheee
Confidence            99999999976 899999999999998444333333321  1223444443322 1 22222223333444444444444


Q ss_pred             EeCCC-------CcEEEEEE--cCCEEEEEeCCCeEEEEECCCC---ceEeeCCccEEEEEEcCCCc-EEEEEcCCcEEE
Q psy7057         156 MYGHP-------NFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRV  222 (557)
Q Consensus       156 ~~~h~-------~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~i  222 (557)
                      +....       ..+..+..  ...+.+++.+|+.|+++|..+.   .....|...++++++.|+|. |++++.|+.+++
T Consensus       478 ~~s~~~~~~~~~~~in~vVs~~~~~~~~~~hed~~Ir~~dn~~~~~l~s~~a~~~svtslai~~ng~~l~s~s~d~sv~l  557 (577)
T KOG0642|consen  478 FESSASPGPRRYPQINKVVSHPTADITFTAHEDRSIRFFDNKTGKILHSMVAHKDSVTSLAIDPNGPYLMSGSHDGSVRL  557 (577)
T ss_pred             ccccCCCcccccCccceEEecCCCCeeEecccCCceecccccccccchheeeccceecceeecCCCceEEeecCCceeeh
Confidence            43211       23344444  4568999999999999997665   55567888999999999998 889999999999


Q ss_pred             EecCCC
Q psy7057         223 FSANPD  228 (557)
Q Consensus       223 wd~~~~  228 (557)
                      |.+...
T Consensus       558 ~kld~k  563 (577)
T KOG0642|consen  558 WKLDVK  563 (577)
T ss_pred             hhccch
Confidence            998654

>KOG0322|consensus

Probab=99.41  E-value=2e-12  Score=120.53  Aligned_cols=180  Identities=18%  Similarity=0.225  Sum_probs=140.7

Q ss_pred             ec-cCcccEEEEEEcCCCcEEEEECCCcEEEEcCCC--------------------------------------------
Q psy7057           8 LY-GHSMDVRSLSVTPDGCILSASRDKSAKLWKPND--------------------------------------------   42 (557)
Q Consensus         8 l~-gH~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~--------------------------------------------   42 (557)
                      ++ .|...|+.+...|++.|.+-++|+.+.+|++..                                            
T Consensus        51 ~r~~g~~~it~lq~~p~d~l~tqgRd~~L~lw~ia~s~~i~i~Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~  130 (323)
T KOG0322|consen   51 IRLFGRLFITNLQSIPNDSLDTQGRDPLLILWTIAYSAFISIHSIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHK  130 (323)
T ss_pred             hhhhccceeeceeecCCcchhhcCCCceEEEEEccCcceEEEeeeeccccccccceeccCCCcchhheecCCcccchhhh
Confidence            45 467889999999998899999999999998764                                            


Q ss_pred             -----------------------CCCC-----CCCCEEEEEECCCeEEEEECCCCeE----------EEEEcccCCcEEE
Q psy7057          43 -----------------------LSPG-----AKVNTLLSASWDMTAKLWCLESQQC----------KLTIRQHEMAVWG   84 (557)
Q Consensus        43 -----------------------~~~~-----~~~~~l~sgs~Dg~i~iwd~~~~~~----------~~~l~~h~~~V~~   84 (557)
                                             ++..     ...-++++|-.+|.+.+||+.++..          ......|+.+|.+
T Consensus       131 ~D~g~~tqv~i~dd~~~~Klgsvmc~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvls  210 (323)
T KOG0322|consen  131 QDGGDTTQVQIADDSERSKLGSVMCQDKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLS  210 (323)
T ss_pred             hccCccceeEccCchhccccCceeeeeccccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCccee
Confidence                                   0000     0112467788899999999998733          3334568999999


Q ss_pred             EEEcCCC-EEEEEECCCeEEEEeCC---CcE-E-EEEeCCCCCEEEEEEeCCCe-EEEEECCCeEEEEECCCCeEEEEEe
Q psy7057          85 VIQLANG-IIVTGCADKTIKLHSEE---GEF-L-KTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHTMY  157 (557)
Q Consensus        85 l~~~~~~-~l~sgs~dg~I~vwd~~---~~~-~-~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~  157 (557)
                      +.|.+.- .=++|+.+..+..|+..   +.+ + ..+.-..-.|..+.+-||++ ++|+++|+.||+|+.++..++..++
T Consensus       211 ldyas~~~rGisgga~dkl~~~Sl~~s~gslq~~~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLk  290 (323)
T KOG0322|consen  211 LDYASSCDRGISGGADDKLVMYSLNHSTGSLQIRKEITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLK  290 (323)
T ss_pred             eeechhhcCCcCCCccccceeeeeccccCcccccceEEecCCCccceEEccCCcEEeecccCCcEEEEEeccCCchhhhh
Confidence            9998744 66788888899999832   222 1 12222234588889999988 5699999999999999999999999


Q ss_pred             CCCCcEEEEEEc--CCEEEEEeCCCeEEEEEC
Q psy7057         158 GHPNFIYSVAAH--GDLITSGGEDQCVCVYQN  187 (557)
Q Consensus       158 ~h~~~V~~l~~~--~~~l~s~s~Dg~I~iwd~  187 (557)
                      -|.+.|.+++|+  ...++++|.|++|.+|++
T Consensus       291 yHsagvn~vAfspd~~lmAaaskD~rISLWkL  322 (323)
T KOG0322|consen  291 YHSAGVNAVAFSPDCELMAAASKDARISLWKL  322 (323)
T ss_pred             hhhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence            999999999994  358999999999999985

>KOG2321|consensus

Probab=99.41  E-value=1.8e-11  Score=125.02  Aligned_cols=221  Identities=12%  Similarity=0.112  Sum_probs=166.6

Q ss_pred             cCcccEEEEEEcCCCc--EEEEECCCcEEEEcCCC---------------------------------------------
Q psy7057          10 GHSMDVRSLSVTPDGC--ILSASRDKSAKLWKPND---------------------------------------------   42 (557)
Q Consensus        10 gH~~~V~~l~~spdg~--l~sgs~Dg~V~iWd~~~---------------------------------------------   42 (557)
                      +|....+.|..+|||+  ++||-..-.|++||+..                                             
T Consensus        49 e~p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanLSLKFERhlDae~V~feiLsDD~SK~v~L~~DR~IefHak~G~hy  128 (703)
T KOG2321|consen   49 EMPTASTRIKVSPDGQYLLATGTYKPQIKVYDLANLSLKFERHLDAEVVDFEILSDDYSKSVFLQNDRTIEFHAKYGRHY  128 (703)
T ss_pred             CCccccceeEecCCCcEEEEecccCCceEEEEcccceeeeeecccccceeEEEeccchhhheEeecCceeeehhhcCeee
Confidence            4778889999999998  77999999999999987                                             


Q ss_pred             ----------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCC-c
Q psy7057          43 ----------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEG-E  110 (557)
Q Consensus        43 ----------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~-~  110 (557)
                                ++++.-..-|++++....|.-++++.|+.+..+......++++..++.. +|++|+.+|.+.+||... .
T Consensus       129 ~~RIP~~GRDm~y~~~scDly~~gsg~evYRlNLEqGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ks  208 (703)
T KOG2321|consen  129 RTRIPKFGRDMKYHKPSCDLYLVGSGSEVYRLNLEQGRFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDPRDKS  208 (703)
T ss_pred             eeecCcCCccccccCCCccEEEeecCcceEEEEccccccccccccccccceeeeecCccceEEecccCceEEEecchhhh
Confidence                      2333223346666666778888999999998888888999999999955 999999999999999433 2


Q ss_pred             EEEEE------eCCCC-----CEEEEEEeCCCe-EEEEECCCeEEEEECCCCeEEEEEe-CCCCcEEEEEE---cCCEEE
Q psy7057         111 FLKTL------TGHTD-----CVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHTMY-GHPNFIYSVAA---HGDLIT  174 (557)
Q Consensus       111 ~~~~l------~~h~~-----~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~-~h~~~V~~l~~---~~~~l~  174 (557)
                      .+.++      ..|..     .|+++.|+.+|. +++|+.+|.+.|||+++.+++..-. +..-+|..+.|   +..--+
T Consensus       209 rv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~kdh~~e~pi~~l~~~~~~~q~~v  288 (703)
T KOG2321|consen  209 RVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVKDHGYELPIKKLDWQDTDQQNKV  288 (703)
T ss_pred             hheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeecccCCccceeeecccccCCCceE
Confidence            22222      22333     499999999887 8899999999999999988876533 22457778888   222334


Q ss_pred             EEeCCCeEEEEECCCC--ceEeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCc
Q psy7057         175 SGGEDQCVCVYQNKAQ--NSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQ  230 (557)
Q Consensus       175 s~s~Dg~I~iwd~~~~--~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~  230 (557)
                      .......++|||-.+.  .....+...+..+|+.|++. ++++-+++.+..|=+...-+
T Consensus       289 ~S~Dk~~~kiWd~~~Gk~~asiEpt~~lND~C~~p~sGm~f~Ane~~~m~~yyiP~LGP  347 (703)
T KOG2321|consen  289 VSMDKRILKIWDECTGKPMASIEPTSDLNDFCFVPGSGMFFTANESSKMHTYYIPSLGP  347 (703)
T ss_pred             EecchHHhhhcccccCCceeeccccCCcCceeeecCCceEEEecCCCcceeEEccccCC
Confidence            4445678999996555  33344566799999999987 77888888887776654433

>KOG1587|consensus

Probab=99.37  E-value=5.6e-11  Score=126.67  Aligned_cols=212  Identities=18%  Similarity=0.172  Sum_probs=155.5

Q ss_pred             CeEEEEECCCC-eEEEEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEeCCCcEE-------EEEeCCCCCEEEEEEe
Q psy7057          59 MTAKLWCLESQ-QCKLTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHSEEGEFL-------KTLTGHTDCVRGLAVL  128 (557)
Q Consensus        59 g~i~iwd~~~~-~~~~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~~~~~~-------~~l~~h~~~V~~l~~~  128 (557)
                      +.+.+|+++.. .+...+. -...|.|+.|+|..  +++.|+.+|.|.+||.+....       .....|..++..+.|.
T Consensus       222 ~~~~vW~~~~p~~Pe~~~~-~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~  300 (555)
T KOG1587|consen  222 GVLLVWSLKNPNTPELVLE-SPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWL  300 (555)
T ss_pred             ceEEEEecCCCCCceEEEe-cCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEe
Confidence            37899999876 4445554 57789999999965  899999999999999433221       1223688999999997


Q ss_pred             CC---CeEEEEECCCeEEEEECCCCeE-EE-----EEe------CCCCcEEEEEE---cCCEEEEEeCCCeEEEEE---C
Q psy7057         129 ND---TDFVSCSNDASIRVWDSTTGKC-VH-----TMY------GHPNFIYSVAA---HGDLITSGGEDQCVCVYQ---N  187 (557)
Q Consensus       129 ~~---~~lvs~s~Dg~I~vwd~~~~~~-~~-----~~~------~h~~~V~~l~~---~~~~l~s~s~Dg~I~iwd---~  187 (557)
                      .+   ..|+++|.||.|..|+++.-.. ..     ...      .-...+++++|   +...++.|+++|.|.--+   .
T Consensus       301 ~~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~  380 (555)
T KOG1587|consen  301 QNEHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGY  380 (555)
T ss_pred             ccCCCCceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCC
Confidence            54   3499999999999999875332 11     111      12346778888   677899999999998733   1


Q ss_pred             CCC--------ceEeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecC-CCCcchhHHHhcccceeEEEeccCCCceeEE
Q psy7057         188 KAQ--------NSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSAN-PDRQAEDAVQAQYAEEVKKLKSANEQEIGGV  257 (557)
Q Consensus       188 ~~~--------~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~-~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~v  257 (557)
                      +..        .....|.++|+++.++|-+. ++..+.|-++|||+.. ...+.  .........+..+.|.+..+..++
T Consensus       381 ~~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl--~~~~~~~~~v~~vaWSptrpavF~  458 (555)
T KOG1587|consen  381 TPAPEVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVIASPL--LSLDSSPDYVTDVAWSPTRPAVFA  458 (555)
T ss_pred             cccccccccccccccccCcceEeeecCCCccceeeeeccceeEeccccCCCCcc--hhhhhccceeeeeEEcCcCceEEE
Confidence            111        24456778999999999987 4444449999999877 33332  333344555889999999999899


Q ss_pred             EEeCCCcEEEEecCCC
Q psy7057         258 KVSDDGIVRVFSANPD  273 (557)
Q Consensus       258 s~s~DG~IrvW~~~~~  273 (557)
                      ++..||.|-+||+...
T Consensus       459 ~~d~~G~l~iWDLl~~  474 (555)
T KOG1587|consen  459 TVDGDGNLDIWDLLQD  474 (555)
T ss_pred             EEcCCCceehhhhhcc
Confidence            9999999999997643

>KOG0771|consensus

Probab=99.37  E-value=5.9e-12  Score=124.55  Aligned_cols=184  Identities=19%  Similarity=0.177  Sum_probs=140.2

Q ss_pred             CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeC--C
Q psy7057          43 LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTG--H  118 (557)
Q Consensus        43 ~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~--h  118 (557)
                      ++++.++..+++|+.||++|+|+..+...+.....|...|.++.|+|++ .|++-+.| ..+||+ .++.++..+..  -
T Consensus       150 vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t~~~k  228 (398)
T KOG0771|consen  150 VAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKTPFSK  228 (398)
T ss_pred             EEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcCCccc
Confidence            6778889999999999999999988888888888999999999999999 89999999 999999 56656555542  2


Q ss_pred             CCCEEEEEEeCCC-----eEE-EEECCCeEEEEECCCCeE-----EEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEE
Q psy7057         119 TDCVRGLAVLNDT-----DFV-SCSNDASIRVWDSTTGKC-----VHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVY  185 (557)
Q Consensus       119 ~~~V~~l~~~~~~-----~lv-s~s~Dg~I~vwd~~~~~~-----~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iw  185 (557)
                      ......+.|+.++     +++ ....-+.|+.|++..++-     .++...-...|.+++.  +|++++.|+.||.|-|+
T Consensus       229 ~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsVai~  308 (398)
T KOG0771|consen  229 DEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGSVAIY  308 (398)
T ss_pred             chhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCcEEEE
Confidence            2334555666554     233 333445677766543321     1111122346778777  89999999999999999


Q ss_pred             ECCCCceEe----eCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCC
Q psy7057         186 QNKAQNSFM----IPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANP  227 (557)
Q Consensus       186 d~~~~~~~~----~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~  227 (557)
                      +..+++.+.    .|...|+.+.|+|+.+ +++-+.|..++|..+.-
T Consensus       309 ~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v~~l~v  355 (398)
T KOG0771|consen  309 DAKSLQRLQYVKEAHLGFVTGLTFSPDSRYLASVSSDNEAAVTKLAV  355 (398)
T ss_pred             EeceeeeeEeehhhheeeeeeEEEcCCcCcccccccCCceeEEEEee
Confidence            988875543    4778999999999988 88888899999988764

>KOG1310|consensus

Probab=99.37  E-value=1.6e-12  Score=131.69  Aligned_cols=156  Identities=18%  Similarity=0.270  Sum_probs=126.5

Q ss_pred             EEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEE-eCCCCCEEEEEEeCC--Ce-EEEEECCCeEEE
Q psy7057          71 CKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTL-TGHTDCVRGLAVLND--TD-FVSCSNDASIRV  144 (557)
Q Consensus        71 ~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l-~~h~~~V~~l~~~~~--~~-lvs~s~Dg~I~v  144 (557)
                      ....|.||.+.|.|+.|+.+| +|++||.|-.+.||| ...++++.+ .+|...|.++.|.|.  ++ +++|+.|..|++
T Consensus        42 lE~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~l  121 (758)
T KOG1310|consen   42 LEAELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKL  121 (758)
T ss_pred             hhhhhccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEE
Confidence            346789999999999999999 999999999999999 566666666 489999999999986  33 669999999999


Q ss_pred             EECCC----------CeEEEEEeCCCCcEEEEEE---cCCEEEEEeCCCeEEEEECCCCceEe----e---------CCc
Q psy7057         145 WDSTT----------GKCVHTMYGHPNFIYSVAA---HGDLITSGGEDQCVCVYQNKAQNSFM----I---------PAM  198 (557)
Q Consensus       145 wd~~~----------~~~~~~~~~h~~~V~~l~~---~~~~l~s~s~Dg~I~iwd~~~~~~~~----~---------~~~  198 (557)
                      +|+..          .+..+.+..|...|-.|+.   .+..+.++++||+|+-+|+++.....    .         .--
T Consensus       122 fdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~l~ny~~~li  201 (758)
T KOG1310|consen  122 FDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSILVNYNPQLI  201 (758)
T ss_pred             EecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccccccHHHHHhchhhh
Confidence            99874          2344556678888888887   34689999999999999987641111    1         112


Q ss_pred             cEEEEEEcCCCc--EEEEEcCCcEEEEecC
Q psy7057         199 SVWAVAILPNSD--IVTGSSDGIVRVFSAN  226 (557)
Q Consensus       199 ~v~~v~~~p~g~--l~sg~~Dg~I~iwd~~  226 (557)
                      ...++.++|...  |++|++|-..|+||.+
T Consensus       202 elk~ltisp~rp~~laVGgsdpfarLYD~R  231 (758)
T KOG1310|consen  202 ELKCLTISPSRPYYLAVGGSDPFARLYDRR  231 (758)
T ss_pred             eeeeeeecCCCCceEEecCCCchhhhhhhh
Confidence            467899999876  8999999999999953

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=99.37  E-value=1.5e-10  Score=118.61  Aligned_cols=228  Identities=9%  Similarity=0.084  Sum_probs=139.9

Q ss_pred             CCCCCCCCEEEEEE-CCCeEEEEECC-CCeE--EEEEcccCCcEEEEEEcCCC-EEEEEE-CCCeEEEEeCC--C---cE
Q psy7057          43 LSPGAKVNTLLSAS-WDMTAKLWCLE-SQQC--KLTIRQHEMAVWGVIQLANG-IIVTGC-ADKTIKLHSEE--G---EF  111 (557)
Q Consensus        43 ~~~~~~~~~l~sgs-~Dg~i~iwd~~-~~~~--~~~l~~h~~~V~~l~~~~~~-~l~sgs-~dg~I~vwd~~--~---~~  111 (557)
                      +.+++++++|++++ .++.|.+|++. +++.  +.... .......++++|++ .+++++ .++.|.+|+.+  +   ..
T Consensus        40 l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~-~~~~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~  118 (330)
T PRK11028         40 MVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAESP-LPGSPTHISTDHQGRFLFSASYNANCVSVSPLDKDGIPVAP  118 (330)
T ss_pred             EEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeeec-CCCCceEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCCCc
Confidence            55677888887665 47889999986 3332  22222 33456789999988 555554 58899999843  2   22


Q ss_pred             EEEEeCCCCCEEEEEEeCCCe-E-EEEECCCeEEEEECCCCeEEEE-----Ee-CCCCcEEEEEE--cCCEEEEEeC-CC
Q psy7057         112 LKTLTGHTDCVRGLAVLNDTD-F-VSCSNDASIRVWDSTTGKCVHT-----MY-GHPNFIYSVAA--HGDLITSGGE-DQ  180 (557)
Q Consensus       112 ~~~l~~h~~~V~~l~~~~~~~-l-vs~s~Dg~I~vwd~~~~~~~~~-----~~-~h~~~V~~l~~--~~~~l~s~s~-Dg  180 (557)
                      +..+. +.....+++++|+++ + ++...++.|.+||+.+...+..     .. ......+.+.+  ++++++++.. ++
T Consensus       119 ~~~~~-~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~~g~~p~~~~~~pdg~~lyv~~~~~~  197 (330)
T PRK11028        119 IQIIE-GLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTVEGAGPRHMVFHPNQQYAYCVNELNS  197 (330)
T ss_pred             eeecc-CCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCcccccCCCceecCCCCCCceEEECCCCCEEEEEecCCC
Confidence            33332 334467788999976 3 3566779999999976332211     11 11234566777  6678877765 89


Q ss_pred             eEEEEECCC--C-----ceEeeCC------ccEEEEEEcCCCc-EEEEE-cCCcEEEEecCCCCcc-hhHHHhcccceeE
Q psy7057         181 CVCVYQNKA--Q-----NSFMIPA------MSVWAVAILPNSD-IVTGS-SDGIVRVFSANPDRQA-EDAVQAQYAEEVK  244 (557)
Q Consensus       181 ~I~iwd~~~--~-----~~~~~~~------~~v~~v~~~p~g~-l~sg~-~Dg~I~iwd~~~~~~~-~~~~~~~~~~~v~  244 (557)
                      +|.+|++..  .     +.+....      .....+.++|+++ ++++. .+++|.+|+++..... .............
T Consensus       198 ~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~~~~~p~  277 (330)
T PRK11028        198 SVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYACDRTASLISVFSVSEDGSVLSFEGHQPTETQPR  277 (330)
T ss_pred             EEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEecCCCCeEEEEEEeCCCCeEEEeEEEeccccCC
Confidence            999999752  1     1121111      1223588999998 55554 4789999998654321 0000000011223


Q ss_pred             EEeccCCCceeEEEEeCCCcEEEEecCC
Q psy7057         245 KLKSANEQEIGGVKVSDDGIVRVFSANP  272 (557)
Q Consensus       245 ~l~~~~~~~~~~vs~s~DG~IrvW~~~~  272 (557)
                      .+.+.++.....++...+++|.+|+++.
T Consensus       278 ~~~~~~dg~~l~va~~~~~~v~v~~~~~  305 (330)
T PRK11028        278 GFNIDHSGKYLIAAGQKSHHISVYEIDG  305 (330)
T ss_pred             ceEECCCCCEEEEEEccCCcEEEEEEcC
Confidence            4556666666566666799999998864

>KOG1524|consensus

Probab=99.36  E-value=3.2e-11  Score=122.12  Aligned_cols=185  Identities=18%  Similarity=0.164  Sum_probs=142.0

Q ss_pred             EEEEECCCcEEEEcCCC---------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCC
Q psy7057          26 ILSASRDKSAKLWKPND---------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLAN   90 (557)
Q Consensus        26 l~sgs~Dg~V~iWd~~~---------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~   90 (557)
                      |+.++.||.+.|-+-..               -.++++|.-|++++.||.|++|. ++|-...++.....+|.|++|.|+
T Consensus        78 ~~i~s~DGkf~il~k~~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWS-rsGMLRStl~Q~~~~v~c~~W~p~  156 (737)
T KOG1524|consen   78 LLICSNDGRFVILNKSARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWS-RSGMLRSTVVQNEESIRCARWAPN  156 (737)
T ss_pred             EEEEcCCceEEEecccchhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEe-ccchHHHHHhhcCceeEEEEECCC
Confidence            88899999999887554               46788999999999999999998 556555566667889999999998


Q ss_pred             C--EEEEEECCCeEEEEeC-CCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEE
Q psy7057          91 G--IIVTGCADKTIKLHSE-EGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSV  166 (557)
Q Consensus        91 ~--~l~sgs~dg~I~vwd~-~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l  166 (557)
                      .  .+.+  ..+.+.|=.+ ....+...+.|.+-|.++.|++.+. +++|+.|-..++|| ..|..+.+-..|..+|+++
T Consensus       157 S~~vl~c--~g~h~~IKpL~~n~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD-~~G~~Lf~S~~~ey~ITSv  233 (737)
T KOG1524|consen  157 SNSIVFC--QGGHISIKPLAANSKIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWD-AQGANLFTSAAEEYAITSV  233 (737)
T ss_pred             CCceEEe--cCCeEEEeecccccceeEEeccCcEEEEeecCccccceeecCCceeEEeec-ccCcccccCChhccceeee
Confidence            7  3333  3455555442 2334556788999999999999865 67999999999999 4588888888899999999


Q ss_pred             EEcCCEEEEEeCCCeEEEEECCCCceEeeCCccEEEEEEcCCCc-EEEEEcCCcEEE
Q psy7057         167 AAHGDLITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRV  222 (557)
Q Consensus       167 ~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~i  222 (557)
                      +|+++.++..+.-.++|+=        ....+.|..++|++||. +++|+..|.+.+
T Consensus       234 a~npd~~~~v~S~nt~R~~--------~p~~GSifnlsWS~DGTQ~a~gt~~G~v~~  282 (737)
T KOG1524|consen  234 AFNPEKDYLLWSYNTARFS--------SPRVGSIFNLSWSADGTQATCGTSTGQLIV  282 (737)
T ss_pred             eeccccceeeeeeeeeeec--------CCCccceEEEEEcCCCceeeccccCceEEE
Confidence            9966544444444455521        22345899999999998 888888887654

>KOG2111|consensus

Probab=99.36  E-value=2.3e-09  Score=102.81  Aligned_cols=213  Identities=15%  Similarity=0.263  Sum_probs=152.3

Q ss_pred             cEEEEEEcCCCcEEEEECCCcEEEEcCCCCCCC------C----------CCCEE-EEEECC------CeEEEEECCCCe
Q psy7057          14 DVRSLSVTPDGCILSASRDKSAKLWKPNDLSPG------A----------KVNTL-LSASWD------MTAKLWCLESQQ   70 (557)
Q Consensus        14 ~V~~l~~spdg~l~sgs~Dg~V~iWd~~~~~~~------~----------~~~~l-~sgs~D------g~i~iwd~~~~~   70 (557)
                      ...+++|+.|..-++++.|.-.|||+.+.+.-.      .          ..++| +.|+.+      ..+.|||=...+
T Consensus         7 ~~lsvs~NQD~ScFava~~~Gfriyn~~P~ke~~~r~~~~~G~~~veMLfR~N~laLVGGg~~pky~pNkviIWDD~k~~   86 (346)
T KOG2111|consen    7 KTLSVSFNQDHSCFAVATDTGFRIYNCDPFKESASRQFIDGGFKIVEMLFRSNYLALVGGGSRPKYPPNKVIIWDDLKER   86 (346)
T ss_pred             ceeEEEEccCCceEEEEecCceEEEecCchhhhhhhccccCchhhhhHhhhhceEEEecCCCCCCCCCceEEEEecccCc
Confidence            455699999988777777778999998762111      1          11333 344433      579999966667


Q ss_pred             EEEEEcccCCcEEEEEEcCCCEEEEEECCCeEEEEeCC--CcEEEEEeC--CCCCEEEEEEeCCCeEE--EEECCCeEEE
Q psy7057          71 CKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEE--GEFLKTLTG--HTDCVRGLAVLNDTDFV--SCSNDASIRV  144 (557)
Q Consensus        71 ~~~~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~~--~~~~~~l~~--h~~~V~~l~~~~~~~lv--s~s~Dg~I~v  144 (557)
                      ++.++. ...+|.++.+.++..++.  ..+.|.||...  -+.++.+..  ....+++++-+.+..++  -|-.-|.|+|
T Consensus        87 ~i~el~-f~~~I~~V~l~r~riVvv--l~~~I~VytF~~n~k~l~~~et~~NPkGlC~~~~~~~k~~LafPg~k~GqvQi  163 (346)
T KOG2111|consen   87 CIIELS-FNSEIKAVKLRRDRIVVV--LENKIYVYTFPDNPKLLHVIETRSNPKGLCSLCPTSNKSLLAFPGFKTGQVQI  163 (346)
T ss_pred             EEEEEE-eccceeeEEEcCCeEEEE--ecCeEEEEEcCCChhheeeeecccCCCceEeecCCCCceEEEcCCCccceEEE
Confidence            777775 678999999988774443  46889999843  344555442  23446666555444444  3556689999


Q ss_pred             EECCCCeE--EEEEeCCCCcEEEEEE--cCCEEEEEeCCCe-EEEEECCCCceEee-----CCccEEEEEEcCCCc-EEE
Q psy7057         145 WDSTTGKC--VHTMYGHPNFIYSVAA--HGDLITSGGEDQC-VCVYQNKAQNSFMI-----PAMSVWAVAILPNSD-IVT  213 (557)
Q Consensus       145 wd~~~~~~--~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~-I~iwd~~~~~~~~~-----~~~~v~~v~~~p~g~-l~s  213 (557)
                      -|+..-+.  -..+..|.+.|.|++.  +|..++|+|..|+ |||||..+...+..     ....|++++|+|+.. +++
T Consensus       164 ~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp~~s~Lav  243 (346)
T KOG2111|consen  164 VDLASTKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFSPNSSWLAV  243 (346)
T ss_pred             EEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeCCCccEEEE
Confidence            99876554  4677899999999999  8899999999997 69999776633322     234799999999999 788


Q ss_pred             EEcCCcEEEEecCCCC
Q psy7057         214 GSSDGIVRVFSANPDR  229 (557)
Q Consensus       214 g~~Dg~I~iwd~~~~~  229 (557)
                      +|..|+|+||.+....
T Consensus       244 sSdKgTlHiF~l~~~~  259 (346)
T KOG2111|consen  244 SSDKGTLHIFSLRDTE  259 (346)
T ss_pred             EcCCCeEEEEEeecCC
Confidence            8889999999987643

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=99.33  E-value=4.9e-10  Score=114.90  Aligned_cols=222  Identities=14%  Similarity=0.193  Sum_probs=144.5

Q ss_pred             EEEEeccCcccEEEEEEcCCCc-EEEE-ECCCcEEEEcCCC------------------CCCCCCCCEEEEEEC-CCeEE
Q psy7057           4 LSTALYGHSMDVRSLSVTPDGC-ILSA-SRDKSAKLWKPND------------------LSPGAKVNTLLSASW-DMTAK   62 (557)
Q Consensus         4 l~~~l~gH~~~V~~l~~spdg~-l~sg-s~Dg~V~iWd~~~------------------~~~~~~~~~l~sgs~-Dg~i~   62 (557)
                      +.+++. +.+....++++|+++ |+++ ..++.|.+|++..                  +.+++++++|++++. ++.|.
T Consensus        27 ~~~~~~-~~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~~~~~p~~i~~~~~g~~l~v~~~~~~~v~  105 (330)
T PRK11028         27 LLQVVD-VPGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAESPLPGSPTHISTDHQGRFLFSASYNANCVS  105 (330)
T ss_pred             eeeEEe-cCCCCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeeecCCCCceEEEECCCCCEEEEEEcCCCeEE
Confidence            445554 345677899999998 5544 4688999998752                  456678888888775 78999


Q ss_pred             EEECCC-C---eEEEEEcccCCcEEEEEEcCCC-EE-EEEECCCeEEEEeCCC-cEEE-----EEe-CCCCCEEEEEEeC
Q psy7057          63 LWCLES-Q---QCKLTIRQHEMAVWGVIQLANG-II-VTGCADKTIKLHSEEG-EFLK-----TLT-GHTDCVRGLAVLN  129 (557)
Q Consensus        63 iwd~~~-~---~~~~~l~~h~~~V~~l~~~~~~-~l-~sgs~dg~I~vwd~~~-~~~~-----~l~-~h~~~V~~l~~~~  129 (557)
                      +|++++ +   +.+..+. +.....+++++|++ .+ ++...++.|.+||... ..+.     ... ......+.+.|+|
T Consensus       106 v~~~~~~g~~~~~~~~~~-~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~~g~~p~~~~~~p  184 (330)
T PRK11028        106 VSPLDKDGIPVAPIQIIE-GLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTVEGAGPRHMVFHP  184 (330)
T ss_pred             EEEECCCCCCCCceeecc-CCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCcccccCCCceecCCCCCCceEEECC
Confidence            999864 2   2233333 33445678899988 44 5566679999999532 2111     011 1234567899999


Q ss_pred             CCeEE-EEE-CCCeEEEEECCC--C--eEEEEEeCCC------CcEEEEEE--cCCEEEEEe-CCCeEEEEECCCC---c
Q psy7057         130 DTDFV-SCS-NDASIRVWDSTT--G--KCVHTMYGHP------NFIYSVAA--HGDLITSGG-EDQCVCVYQNKAQ---N  191 (557)
Q Consensus       130 ~~~lv-s~s-~Dg~I~vwd~~~--~--~~~~~~~~h~------~~V~~l~~--~~~~l~s~s-~Dg~I~iwd~~~~---~  191 (557)
                      +++++ ++. .+++|.+|++..  +  +.+.++..++      .....+.+  ++++++++. .+++|.+|++...   .
T Consensus       185 dg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~~~~~  264 (330)
T PRK11028        185 NQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYACDRTASLISVFSVSEDGSVL  264 (330)
T ss_pred             CCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEecCCCCeEEEEEEeCCCCeE
Confidence            98744 544 489999999873  3  3344443221      12234555  677877775 4789999996432   1


Q ss_pred             eEeeC---CccEEEEEEcCCCc-EEEEE-cCCcEEEEecCC
Q psy7057         192 SFMIP---AMSVWAVAILPNSD-IVTGS-SDGIVRVFSANP  227 (557)
Q Consensus       192 ~~~~~---~~~v~~v~~~p~g~-l~sg~-~Dg~I~iwd~~~  227 (557)
                      .+..+   ....+.+.++|+|+ ++++. .+++|.+|+++.
T Consensus       265 ~~~~~~~~~~~p~~~~~~~dg~~l~va~~~~~~v~v~~~~~  305 (330)
T PRK11028        265 SFEGHQPTETQPRGFNIDHSGKYLIAAGQKSHHISVYEIDG  305 (330)
T ss_pred             EEeEEEeccccCCceEECCCCCEEEEEEccCCcEEEEEEcC
Confidence            22221   12456889999998 55544 489999998863

>KOG1963|consensus

Probab=99.33  E-value=5.9e-10  Score=119.50  Aligned_cols=192  Identities=14%  Similarity=0.141  Sum_probs=128.8

Q ss_pred             EEEEcCCCEEEEEECCCeEEEEeCCCcEEEE-----EeCCCCCEEEEEEeCCCe-EEEEECCCeEEEEECCC----CeEE
Q psy7057          84 GVIQLANGIIVTGCADKTIKLHSEEGEFLKT-----LTGHTDCVRGLAVLNDTD-FVSCSNDASIRVWDSTT----GKCV  153 (557)
Q Consensus        84 ~l~~~~~~~l~sgs~dg~I~vwd~~~~~~~~-----l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~----~~~~  153 (557)
                      ++.+++.+.+.....+..+.+|....+....     -..|.-.+++.+++|.++ ++++..||.|.+|.--.    ....
T Consensus       165 ~I~~~~~ge~~~i~~~~~~~~~~v~~~~~~~~~~~~~~~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~  244 (792)
T KOG1963|consen  165 SIVDNNSGEFKGIVHMCKIHIYFVPKHTKHTSSRDITVHHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETC  244 (792)
T ss_pred             cEEEcCCceEEEEEEeeeEEEEEecccceeeccchhhhhhcccceeEEeccccceEEEeccCCcEEEEeccccccccccc
Confidence            4555556655566666777777732211111     124667789999999988 56888999999996321    1234


Q ss_pred             EEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC--ceEeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCC
Q psy7057         154 HTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ--NSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPD  228 (557)
Q Consensus       154 ~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~--~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~  228 (557)
                      ..+.-|.+.|.+++|  +|.+|++|+..+.+.+|.+.+.  +-++...++|..+.++|++. .+...+|+.|.+....+.
T Consensus       245 t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~kqfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl  324 (792)
T KOG1963|consen  245 TLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLETGKKQFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASDL  324 (792)
T ss_pred             eEEEecccccceeEEecCCceEeecccceEEEEEeecCCCcccccccCCeeEEEEEcCCCCeEEEEecCceEEEEeccch
Confidence            556779999999999  8899999999999999997766  56667788999999999999 778888999999987543


Q ss_pred             CcchhHHH-hcc-------cceeEEEeccCCCceeEEEEeCCCcEEEEecCCChh
Q psy7057         229 RQAEDAVQ-AQY-------AEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQ  275 (557)
Q Consensus       229 ~~~~~~~~-~~~-------~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~~~  275 (557)
                      ........ ...       ...........+....++-.+.-|.|-+|++-+.+.
T Consensus       325 ~~k~tIsgi~~~~~~~k~~~~~l~t~~~idpr~~~~vln~~~g~vQ~ydl~td~~  379 (792)
T KOG1963|consen  325 EIKSTISGIKPPTPSTKTRPQSLTTGVSIDPRTNSLVLNGHPGHVQFYDLYTDST  379 (792)
T ss_pred             hhhhhccCccCCCccccccccccceeEEEcCCCCceeecCCCceEEEEeccccce
Confidence            22111000 000       011111112222333455667777888887766654

>PRK01742 tolB translocation protein TolB; Provisional

Probab=99.32  E-value=4.9e-11  Score=126.65  Aligned_cols=196  Identities=14%  Similarity=0.003  Sum_probs=135.8

Q ss_pred             EEeccCcccEEEEEEcCCCc-EEEEECC---CcEEEEcCCC---------------CCCCCCCCEEEEEE-CCCeEEEE-
Q psy7057           6 TALYGHSMDVRSLSVTPDGC-ILSASRD---KSAKLWKPND---------------LSPGAKVNTLLSAS-WDMTAKLW-   64 (557)
Q Consensus         6 ~~l~gH~~~V~~l~~spdg~-l~sgs~D---g~V~iWd~~~---------------~~~~~~~~~l~sgs-~Dg~i~iw-   64 (557)
                      +.+..|...|.+.+|+|||+ |+.++.+   ..|++||+.+               ..++|+++.|+.++ .++.+.|| 
T Consensus       197 ~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~  276 (429)
T PRK01742        197 FIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASFRGHNGAPAFSPDGSRLAFASSKDGVLNIYV  276 (429)
T ss_pred             eEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEecCCCccCceeECCCCCEEEEEEecCCcEEEEE
Confidence            45677888999999999998 7766543   4699999865               56788999888765 68876655 


Q ss_pred             -ECCCCeEEEEEcccCCcEEEEEEcCCC-EEEE-EECCCeEEEEe--CCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEEC
Q psy7057          65 -CLESQQCKLTIRQHEMAVWGVIQLANG-IIVT-GCADKTIKLHS--EEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSN  138 (557)
Q Consensus        65 -d~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~s-gs~dg~I~vwd--~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~  138 (557)
                       |+.+++ ...+..+...+.+..|+|+| .|+. +..++...||+  ..+.....+ .+..  .+..|+|++. ++.++.
T Consensus       277 ~d~~~~~-~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~~~l-~~~~--~~~~~SpDG~~ia~~~~  352 (429)
T PRK01742        277 MGANGGT-PSQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGASLV-GGRG--YSAQISADGKTLVMING  352 (429)
T ss_pred             EECCCCC-eEeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCeEEe-cCCC--CCccCCCCCCEEEEEcC
Confidence             665554 45566677778899999999 4554 44678888887  333333333 3443  4578999987 555555


Q ss_pred             CCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEEC----CCC-ceEeeCCccEEEEEEcCC
Q psy7057         139 DASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQN----KAQ-NSFMIPAMSVWAVAILPN  208 (557)
Q Consensus       139 Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~----~~~-~~~~~~~~~v~~v~~~p~  208 (557)
                      ++ +.+||+.+++.......+.  ..+++|  +++.|+.++.++.+.+|.+    +.. +.+..+...+..++|+|-
T Consensus       353 ~~-i~~~Dl~~g~~~~lt~~~~--~~~~~~sPdG~~i~~~s~~g~~~~l~~~~~~G~~~~~l~~~~g~~~~p~wsp~  426 (429)
T PRK01742        353 DN-VVKQDLTSGSTEVLSSTFL--DESPSISPNGIMIIYSSTQGLGKVLQLVSADGRFKARLPGSDGQVKFPAWSPY  426 (429)
T ss_pred             CC-EEEEECCCCCeEEecCCCC--CCCceECCCCCEEEEEEcCCCceEEEEEECCCCceEEccCCCCCCCCcccCCC
Confidence            54 5569998887653322222  234455  7889999998988887763    222 556667777888889874

>KOG1272|consensus

Probab=99.31  E-value=3.3e-12  Score=127.30  Aligned_cols=219  Identities=16%  Similarity=0.131  Sum_probs=175.5

Q ss_pred             CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCCEEEEEECCCeEEEEeCCCcEEEEEeCCCCCE
Q psy7057          43 LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKTLTGHTDCV  122 (557)
Q Consensus        43 ~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~~~~~~~~l~~h~~~V  122 (557)
                      +.+..+|..|+.|+..|.+-.+|..+++....+. -...|..+.|.....++.....+-+.|||..|..++.++.| ..|
T Consensus       135 ~~ytrnGrhlllgGrKGHlAa~Dw~t~~L~~Ei~-v~Etv~Dv~~LHneq~~AVAQK~y~yvYD~~GtElHClk~~-~~v  212 (545)
T KOG1272|consen  135 LDYTRNGRHLLLGGRKGHLAAFDWVTKKLHFEIN-VMETVRDVTFLHNEQFFAVAQKKYVYVYDNNGTELHCLKRH-IRV  212 (545)
T ss_pred             eeecCCccEEEecCCccceeeeecccceeeeeee-hhhhhhhhhhhcchHHHHhhhhceEEEecCCCcEEeehhhc-Cch
Confidence            5566789999999999999999999998887775 35578889998877666677889999999999999999876 458


Q ss_pred             EEEEEeCCCe-EEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEEcC--CEEEEEeCCCeEEEEECCCC---ceEeeC
Q psy7057         123 RGLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHG--DLITSGGEDQCVCVYQNKAQ---NSFMIP  196 (557)
Q Consensus       123 ~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~~~--~~l~s~s~Dg~I~iwd~~~~---~~~~~~  196 (557)
                      ..+.|.|... |++++..|.++--|+.+|+.+..+..-.+.+..|+-++  ..+-+|...|+|.+|.....   ..+..|
T Consensus       213 ~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP~skePLvKiLcH  292 (545)
T KOG1272|consen  213 ARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWSPNSKEPLVKILCH  292 (545)
T ss_pred             hhhcccchhheeeecccCCceEEEeechhhhhHHHHccCCccchhhcCCccceEEEcCCCceEEecCCCCcchHHHHHhc
Confidence            9999999876 55888999999999999999998887777777777744  46778889999999996544   667789


Q ss_pred             CccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEe
Q psy7057         197 AMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFS  269 (557)
Q Consensus       197 ~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~  269 (557)
                      .++|.++++.++|. ++|+|.|..++|||++...+...... .+.  ...+.   .+..+++++|.-..|.||.
T Consensus       293 ~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~t-p~~--a~~ls---~SqkglLA~~~G~~v~iw~  360 (545)
T KOG1272|consen  293 RGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRT-PHP--ASNLS---LSQKGLLALSYGDHVQIWK  360 (545)
T ss_pred             CCCcceEEECCCCcEEeecccccceeEeeeccccccceeec-CCC--ccccc---cccccceeeecCCeeeeeh
Confidence            99999999999999 99999999999999997664322221 111  11121   2234567778878899995

>KOG2110|consensus

Probab=99.31  E-value=4.1e-10  Score=109.84  Aligned_cols=223  Identities=13%  Similarity=0.184  Sum_probs=157.0

Q ss_pred             CCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCCEEEEEECC--CeEEEEeCCC-cEEEEEeCCCCC
Q psy7057          45 PGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCAD--KTIKLHSEEG-EFLKTLTGHTDC  121 (557)
Q Consensus        45 ~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~~l~sgs~d--g~I~vwd~~~-~~~~~l~~h~~~  121 (557)
                      ++.+...|..|+.|| .++|..+..............|.-+.|+.. +++..+.+  +.+++.+... ..+..+. ...+
T Consensus        13 ~Nqd~~~lsvGs~~G-yk~~~~~~~~k~~~~~~~~~~IvEmLFSSS-LvaiV~~~qpr~Lkv~~~Kk~~~ICe~~-fpt~   89 (391)
T KOG2110|consen   13 FNQDSTLLSVGSKDG-YKIFSCSPFEKCFSKDTEGVSIVEMLFSSS-LVAIVSIKQPRKLKVVHFKKKTTICEIF-FPTS   89 (391)
T ss_pred             eccceeEEEccCCCc-eeEEecCchHHhhcccCCCeEEEEeecccc-eeEEEecCCCceEEEEEcccCceEEEEe-cCCc
Confidence            445566777788777 467776654332222223445666666644 44433333  3478887433 3333333 4567


Q ss_pred             EEEEEEeCCCeEEEEECCCeEEEEECCCCeEEEEEeC---CCCcEEEEEEcC--CEEEE--EeCCCeEEEEECCCC---c
Q psy7057         122 VRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYG---HPNFIYSVAAHG--DLITS--GGEDQCVCVYQNKAQ---N  191 (557)
Q Consensus       122 V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~~~~~~~~---h~~~V~~l~~~~--~~l~s--~s~Dg~I~iwd~~~~---~  191 (557)
                      |.++.+.. .+|+.+=.+. |.|||+++.+.++++..   +...+.+++++.  .+++-  ....|.|.+||..+.   .
T Consensus        90 IL~VrmNr-~RLvV~Lee~-IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~nl~~v~  167 (391)
T KOG2110|consen   90 ILAVRMNR-KRLVVCLEES-IYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGDVVLFDTINLQPVN  167 (391)
T ss_pred             eEEEEEcc-ceEEEEEccc-EEEEecccceeehhhhccCCCccceEeeccCCCCceEEecCCCCCceEEEEEcccceeee
Confidence            88888864 4466555544 99999999999988763   556677887733  36653  335689999996655   6


Q ss_pred             eEeeCCccEEEEEEcCCCc-EEEEEcCCc-EEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEe
Q psy7057         192 SFMIPAMSVWAVAILPNSD-IVTGSSDGI-VRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFS  269 (557)
Q Consensus       192 ~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~-I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~  269 (557)
                      .+..|.+.+-+++|+++|. |+++++.|+ ||||.+.+++...........-.+.++.+.+... .+.+.|+.++|.||.
T Consensus       168 ~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~-~L~~sS~TeTVHiFK  246 (391)
T KOG2110|consen  168 TINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQ-FLAASSNTETVHIFK  246 (391)
T ss_pred             EEEecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCceeeEEEEEEECCCCC-eEEEecCCCeEEEEE
Confidence            7789999999999999999 889999887 7999999888776666655666788888887776 577778889999999


Q ss_pred             cCCC
Q psy7057         270 ANPD  273 (557)
Q Consensus       270 ~~~~  273 (557)
                      ++..
T Consensus       247 L~~~  250 (391)
T KOG2110|consen  247 LEKV  250 (391)
T ss_pred             eccc
Confidence            8754

>KOG0771|consensus

Probab=99.31  E-value=2.3e-11  Score=120.44  Aligned_cols=188  Identities=19%  Similarity=0.166  Sum_probs=141.0

Q ss_pred             EEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEEEEECCCCeEEEEEeC-
Q psy7057          83 WGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHTMYG-  158 (557)
Q Consensus        83 ~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~-  158 (557)
                      .+++|+.+| .+++|+.||++|+|+ .+...+.....|...|.+|.|+|+++ +++.+.| ..+||+.+++.++..... 
T Consensus       148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t~~  226 (398)
T KOG0771|consen  148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKTPF  226 (398)
T ss_pred             eEEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcCCc
Confidence            578999987 999999999999999 77777777888999999999999997 5688888 999999999977766552 


Q ss_pred             -CCCcEEEEEE--cC---C-EEE-EEeCCCeEEEEECCCC--------ceEeeCCccEEEEEEcCCCc-EEEEEcCCcEE
Q psy7057         159 -HPNFIYSVAA--HG---D-LIT-SGGEDQCVCVYQNKAQ--------NSFMIPAMSVWAVAILPNSD-IVTGSSDGIVR  221 (557)
Q Consensus       159 -h~~~V~~l~~--~~---~-~l~-s~s~Dg~I~iwd~~~~--------~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~  221 (557)
                       .......+.|  ++   . +++ .....+.|+.|++...        .+.......|.+++++++|+ ++.|+.||.|-
T Consensus       227 ~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsVa  306 (398)
T KOG0771|consen  227 SKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGSVA  306 (398)
T ss_pred             ccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCcEE
Confidence             1223334444  33   1 222 3334456666653211        12222234799999999999 77899999999


Q ss_pred             EEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCC
Q psy7057         222 VFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPD  273 (557)
Q Consensus       222 iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~  273 (557)
                      |++..+.+... ...+.|...|+.+.+.|+.. ..++.|.|..++|..+.-+
T Consensus       307 i~~~~~lq~~~-~vk~aH~~~VT~ltF~Pdsr-~~~svSs~~~~~v~~l~vd  356 (398)
T KOG0771|consen  307 IYDAKSLQRLQ-YVKEAHLGFVTGLTFSPDSR-YLASVSSDNEAAVTKLAVD  356 (398)
T ss_pred             EEEeceeeeeE-eehhhheeeeeeEEEcCCcC-cccccccCCceeEEEEeec
Confidence            99998776553 44556778999999998765 4677899999999987753

>KOG2394|consensus

Probab=99.29  E-value=5.2e-11  Score=120.80  Aligned_cols=153  Identities=14%  Similarity=0.127  Sum_probs=118.3

Q ss_pred             cccEEEEEEcCCCc--EEEEECCCcEEEEcCCC--------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCc
Q psy7057          12 SMDVRSLSVTPDGC--ILSASRDKSAKLWKPND--------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMA   81 (557)
Q Consensus        12 ~~~V~~l~~spdg~--l~sgs~Dg~V~iWd~~~--------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~   81 (557)
                      ...|+|+.|.|.+.  ++.+-.+|.+.+||...        ....+++..+.....-..      .+..++..+.--...
T Consensus       219 ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~~k~~~~f~i~t~ksk------~~rNPv~~w~~~~g~  292 (636)
T KOG2394|consen  219 KSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQALKDGDQFAILTSKSK------KTRNPVARWHIGEGS  292 (636)
T ss_pred             ccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCcccccCCCCeeEEeeeecc------ccCCccceeEecccc
Confidence            47899999999665  77888999999998754        222233444433221111      122455555555679


Q ss_pred             EEEEEEcCCC-EEEEEECCCeEEEEeC-CCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEEEEECCCCeEEEEEeC
Q psy7057          82 VWGVIQLANG-IIVTGCADKTIKLHSE-EGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHTMYG  158 (557)
Q Consensus        82 V~~l~~~~~~-~l~sgs~dg~I~vwd~-~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~  158 (557)
                      |...+|+||| .|++.|.||.+||||. +.+.+..++.--+...|++|+|||+ +++|+.|..|.||.+...+.+..-++
T Consensus       293 in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~erRVVARGqG  372 (636)
T KOG2394|consen  293 INEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFEERRVVARGQG  372 (636)
T ss_pred             ccceeEcCCCceEEEEecCceEEEeeccHHHHHHHHHhhccceEEEEEcCCccEEEecCCcceEEEEEeccceEEEeccc
Confidence            9999999999 9999999999999994 4444555566667899999999999 56999999999999999999999999


Q ss_pred             CCCcEEEEEEcC
Q psy7057         159 HPNFIYSVAAHG  170 (557)
Q Consensus       159 h~~~V~~l~~~~  170 (557)
                      |...|..|+||+
T Consensus       373 HkSWVs~VaFDp  384 (636)
T KOG2394|consen  373 HKSWVSVVAFDP  384 (636)
T ss_pred             cccceeeEeecc
Confidence            999999999986

>KOG0974|consensus

Probab=99.28  E-value=1.4e-10  Score=126.07  Aligned_cols=181  Identities=18%  Similarity=0.231  Sum_probs=142.4

Q ss_pred             CCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcE----EEEEEcCCC-EEEEEECCCeEEEEeCCCcE-EEEEeCCCC
Q psy7057          47 AKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAV----WGVIQLANG-IIVTGCADKTIKLHSEEGEF-LKTLTGHTD  120 (557)
Q Consensus        47 ~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V----~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~-~~~l~~h~~  120 (557)
                      .....++.++.+..+.+||...+.....+.......    .-+-.+++. .+++|+.-+.|.+|+..... -..+.+|.+
T Consensus        97 ~e~k~i~l~~~~ns~~i~d~~~~~~~~~i~~~er~~l~~~~~~g~s~~~~~i~~gsv~~~iivW~~~~dn~p~~l~GHeG  176 (967)
T KOG0974|consen   97 EENKKIALVTSRNSLLIRDSKNSSVLSKIQSDERCTLYSSLIIGDSAEELYIASGSVFGEIIVWKPHEDNKPIRLKGHEG  176 (967)
T ss_pred             hhcceEEEEEcCceEEEEecccCceehhcCCCceEEEEeEEEEeccCcEEEEEeccccccEEEEeccccCCcceecccCC
Confidence            345678888899999999988776665555332211    112233444 89999999999999933222 226889999


Q ss_pred             CEEEEEEeCCCe-EEEEECCCeEEEEECCCCeEEE-EEeCCCCcEEEEEEcCCEEEEEeCCCeEEEEECCC--CceEeeC
Q psy7057         121 CVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCVH-TMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKA--QNSFMIP  196 (557)
Q Consensus       121 ~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~~~-~~~~h~~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~--~~~~~~~  196 (557)
                      .|.++.++.+|. ++++|.|.++|+|++.+.+... +.-+|++.|+.+++.++.++++++|.+.++|+...  ...+..|
T Consensus       177 ~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n~i~t~gedctcrvW~~~~~~l~~y~~h  256 (967)
T KOG0974|consen  177 SIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPNRIITVGEDCTCRVWGVNGTQLEVYDEH  256 (967)
T ss_pred             ceEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccceeEEEEeccceeEEeccceEEEEEecccceehhhhhh
Confidence            999999999877 7799999999999999988766 77789999999999777999999999999997332  2455555


Q ss_pred             C-ccEEEEEEcCCCc-EEEEEcCCcEEEEecCC
Q psy7057         197 A-MSVWAVAILPNSD-IVTGSSDGIVRVFSANP  227 (557)
Q Consensus       197 ~-~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~  227 (557)
                      . ..++.++..++.. .+|++.|+.+++|++..
T Consensus       257 ~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~~  289 (967)
T KOG0974|consen  257 SGKGIWKIAVPIGVIIKVTGGNDSTLKLWDLNG  289 (967)
T ss_pred             hhcceeEEEEcCCceEEEeeccCcchhhhhhhc
Confidence            4 4799999998887 88999999999999764

>KOG1334|consensus

Probab=99.27  E-value=1.1e-10  Score=117.19  Aligned_cols=271  Identities=20%  Similarity=0.215  Sum_probs=190.0

Q ss_pred             CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEE-cccCCcEEEEEEcCCC---EEEEEECCCeEEEEe--CCCcE--EEE
Q psy7057          43 LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTI-RQHEMAVWGVIQLANG---IIVTGCADKTIKLHS--EEGEF--LKT  114 (557)
Q Consensus        43 ~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l-~~h~~~V~~l~~~~~~---~l~sgs~dg~I~vwd--~~~~~--~~~  114 (557)
                      +.++..+..|++||.|..|.+||..+++....+ .+|...|.-..|.|..   .+++.+.||.+++=.  .++.+  ...
T Consensus       148 V~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~s~i~~t~~~e~t~r  227 (559)
T KOG1334|consen  148 VHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRVSEILETGYVENTKR  227 (559)
T ss_pred             eeecccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCceeeeeeccccceeccee
Confidence            667778999999999999999999998877776 5688888888888843   899999999999865  34443  345


Q ss_pred             EeCCCCCEEEEEEeCCC--eEEEEECCCeEEEEECCCCeEEEEEe---CCCC---cEEEEEEc---CCEEEEEeCCCeEE
Q psy7057         115 LTGHTDCVRGLAVLNDT--DFVSCSNDASIRVWDSTTGKCVHTMY---GHPN---FIYSVAAH---GDLITSGGEDQCVC  183 (557)
Q Consensus       115 l~~h~~~V~~l~~~~~~--~lvs~s~Dg~I~vwd~~~~~~~~~~~---~h~~---~V~~l~~~---~~~l~s~s~Dg~I~  183 (557)
                      +..|.++|.-++..|..  .|++++.|+.+.-+|++.+.+...+.   .+..   ..++++.+   ...+++++.|-.++
T Consensus       228 l~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia~~P~nt~~faVgG~dqf~R  307 (559)
T KOG1334|consen  228 LAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLYTIAVDPRNTNEFAVGGSDQFAR  307 (559)
T ss_pred             cccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccceeeeeEecCCCCccccccCChhhhhh
Confidence            66799999999999884  38999999999999998876544332   2333   45666663   44799999999999


Q ss_pred             EEECCCCc---------eEe------eCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCc-----------chhHHH
Q psy7057         184 VYQNKAQN---------SFM------IPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQ-----------AEDAVQ  236 (557)
Q Consensus       184 iwd~~~~~---------~~~------~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~-----------~~~~~~  236 (557)
                      +||.+...         .+.      .....|++++++.++. ++++-+|-.|++|.-+.+..           ......
T Consensus       308 vYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~~G~~p~~~s~~~~~~k~vY  387 (559)
T KOG1334|consen  308 VYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASYNDEDIYLFNKSMGDGSEPDPSSPREQYVKRVY  387 (559)
T ss_pred             hhcccchhhccccchhhhcCCccccccCcccceeEEecCCccceeeeecccceEEeccccccCCCCCCCcchhhccchhh
Confidence            99965431         111      1123689999997766 88888999999996443221           001112


Q ss_pred             hccc--ceeEEEeccCCCceeEEEEeCCCcEEEEecCCChhhHHHHHHHHHHHHHHHhhhhhcccCCeeccCCCCccccc
Q psy7057         237 AQYA--EEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDLPGKEVLY  314 (557)
Q Consensus       237 ~~~~--~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  314 (557)
                      .+|.  ..|..+.+..+...++++||.=|.|.||+-..+..+            ..++.    ....+++.+-.+....+
T Consensus       388 KGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~eii------------~~Meg----Dr~VVNCLEpHP~~PvL  451 (559)
T KOG1334|consen  388 KGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEII------------RFMEG----DRHVVNCLEPHPHLPVL  451 (559)
T ss_pred             cccccccccceeeeccCccceEEecCccceEEEEecchhHHH------------HHhhc----ccceEeccCCCCCCchh
Confidence            2332  346777777777778999999999999998876433            22211    11245554444443334


Q ss_pred             CCCccCccEEEEeeC
Q psy7057         315 EPGKADGDVKMVREG  329 (557)
Q Consensus       315 ~~G~~~~~~~~~~~g  329 (557)
                      ..-.-+-.+|+|-+.
T Consensus       452 AsSGid~DVKIWTP~  466 (559)
T KOG1334|consen  452 ASSGIDHDVKIWTPL  466 (559)
T ss_pred             hccCCccceeeecCC
Confidence            433345567887663

>PRK01742 tolB translocation protein TolB; Provisional

Probab=99.27  E-value=1.8e-10  Score=122.37  Aligned_cols=186  Identities=15%  Similarity=0.124  Sum_probs=126.5

Q ss_pred             CCcEEEEcCCC---------------CCCCCCCCEEEEEECC---CeEEEEECCCCeE--EEEEcccCCcEEEEEEcCCC
Q psy7057          32 DKSAKLWKPND---------------LSPGAKVNTLLSASWD---MTAKLWCLESQQC--KLTIRQHEMAVWGVIQLANG   91 (557)
Q Consensus        32 Dg~V~iWd~~~---------------~~~~~~~~~l~sgs~D---g~i~iwd~~~~~~--~~~l~~h~~~V~~l~~~~~~   91 (557)
                      +..|.+||...               ..++|+++.|+.++.+   ..|++||+.+++.  +..+.+|   ..+++|+|+|
T Consensus       183 ~~~i~i~d~dg~~~~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g~---~~~~~wSPDG  259 (429)
T PRK01742        183 PYEVRVADYDGFNQFIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASFRGH---NGAPAFSPDG  259 (429)
T ss_pred             eEEEEEECCCCCCceEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEecCCCc---cCceeECCCC
Confidence            35788887644               6788899999988764   3699999988753  3334433   3468999999


Q ss_pred             -EEEEE-ECCCeEEEE--eCCCcEEEEEeCCCCCEEEEEEeCCCe-EE-EEECCCeEEEEECCCC-eEEEEEeCCCCcEE
Q psy7057          92 -IIVTG-CADKTIKLH--SEEGEFLKTLTGHTDCVRGLAVLNDTD-FV-SCSNDASIRVWDSTTG-KCVHTMYGHPNFIY  164 (557)
Q Consensus        92 -~l~sg-s~dg~I~vw--d~~~~~~~~l~~h~~~V~~l~~~~~~~-lv-s~s~Dg~I~vwd~~~~-~~~~~~~~h~~~V~  164 (557)
                       .|+.+ +.++.+.||  |..+.....+..+...+.+..|+|++. |+ ++..++...||++... .....+ .+..  .
T Consensus       260 ~~La~~~~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~~~l-~~~~--~  336 (429)
T PRK01742        260 SRLAFASSKDGVLNIYVMGANGGTPSQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGASLV-GGRG--Y  336 (429)
T ss_pred             CEEEEEEecCCcEEEEEEECCCCCeEeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCeEEe-cCCC--C
Confidence             56655 468876665  555555667777777888999999987 55 4445788888876432 222222 3433  3


Q ss_pred             EEEE--cCCEEEEEeCCCeEEEEECCCC--ceEeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEec
Q psy7057         165 SVAA--HGDLITSGGEDQCVCVYQNKAQ--NSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSA  225 (557)
Q Consensus       165 ~l~~--~~~~l~s~s~Dg~I~iwd~~~~--~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~  225 (557)
                      +..+  +++.|+..+.++ +.+||+.+.  ..+... ....+++|+|+|+ |+.++.++.+++|.+
T Consensus       337 ~~~~SpDG~~ia~~~~~~-i~~~Dl~~g~~~~lt~~-~~~~~~~~sPdG~~i~~~s~~g~~~~l~~  400 (429)
T PRK01742        337 SAQISADGKTLVMINGDN-VVKQDLTSGSTEVLSST-FLDESPSISPNGIMIIYSSTQGLGKVLQL  400 (429)
T ss_pred             CccCCCCCCEEEEEcCCC-EEEEECCCCCeEEecCC-CCCCCceECCCCCEEEEEEcCCCceEEEE
Confidence            3445  788888777765 555897655  222222 2346788999999 778888888888875

>KOG1523|consensus

Probab=99.27  E-value=3.1e-10  Score=108.80  Aligned_cols=188  Identities=15%  Similarity=0.114  Sum_probs=149.5

Q ss_pred             CCCCCCCCEEEEEECCCeEEEEECCCC---eEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeC-CC---cEEEE
Q psy7057          43 LSPGAKVNTLLSASWDMTAKLWCLESQ---QCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSE-EG---EFLKT  114 (557)
Q Consensus        43 ~~~~~~~~~l~sgs~Dg~i~iwd~~~~---~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~-~~---~~~~~  114 (557)
                      .+++++...++.+.....|.||.....   +..+++..|...|+++.|.|.. .|++++.|...++|.. ++   ++...
T Consensus        16 hAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~~~~Wkptlv   95 (361)
T KOG1523|consen   16 HAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSGGTWKPTLV   95 (361)
T ss_pred             eeecCCCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCccccccCCCCeecccee
Confidence            356678889999999999999987654   5788999999999999999987 9999999999999984 33   34556


Q ss_pred             EeCCCCCEEEEEEeCC-CeEEEEECCCeEEEEECCCCe----EEEEEeCCCCcEEEEEEc--CCEEEEEeCCCeEEEEE-
Q psy7057         115 LTGHTDCVRGLAVLND-TDFVSCSNDASIRVWDSTTGK----CVHTMYGHPNFIYSVAAH--GDLITSGGEDQCVCVYQ-  186 (557)
Q Consensus       115 l~~h~~~V~~l~~~~~-~~lvs~s~Dg~I~vwd~~~~~----~~~~~~~h~~~V~~l~~~--~~~l~s~s~Dg~I~iwd-  186 (557)
                      +..+....+++.|+|. ++|++||.-..|.||-+....    ..+.-+.+.+.|.+++|+  +-+|++||.|+..|+|. 
T Consensus        96 LlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVLlaaGs~D~k~rVfSa  175 (361)
T KOG1523|consen   96 LLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLAAGSTDGKCRVFSA  175 (361)
T ss_pred             EEEeccceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhCCccccceeeeeccCCcceecccccCcceeEEEE
Confidence            6779999999999998 569999999999999865432    112224567889999994  44788999999999997 


Q ss_pred             -CCCC-------------------ceEeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCc
Q psy7057         187 -NKAQ-------------------NSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQ  230 (557)
Q Consensus       187 -~~~~-------------------~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~  230 (557)
                       ++..                   .++....+.+..+.|+|+|. |+=.+.|.++.+=|.....+
T Consensus       176 yIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~lawv~Hds~v~~~da~~p~~  240 (361)
T KOG1523|consen  176 YIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNRLAWVGHDSTVSFVDAAGPSE  240 (361)
T ss_pred             eeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCCEeeEecCCCceEEeecCCCch
Confidence             1110                   11123345799999999998 88899999999999876653

>KOG3881|consensus

Probab=99.26  E-value=8.2e-10  Score=108.49  Aligned_cols=228  Identities=15%  Similarity=0.167  Sum_probs=163.5

Q ss_pred             CcccEEEEEEcCCCc--EEEE-ECCCcEEEEcCCC------------CC--------CCCCCCEEEEEECCCeEEEEECC
Q psy7057          11 HSMDVRSLSVTPDGC--ILSA-SRDKSAKLWKPND------------LS--------PGAKVNTLLSASWDMTAKLWCLE   67 (557)
Q Consensus        11 H~~~V~~l~~spdg~--l~sg-s~Dg~V~iWd~~~------------~~--------~~~~~~~l~sgs~Dg~i~iwd~~   67 (557)
                      -...|++++|--++.  ++.+ +.+..+....+..            +.        .......|++|-.+|.+.+|..+
T Consensus        54 ~~~ris~l~~~~d~~tevl~~r~~~~~~~~~~~~E~~~~s~~~~~~~~~l~~~~I~gl~~~dg~Litc~~sG~l~~~~~k  133 (412)
T KOG3881|consen   54 ELDRISSLLFGVDGETEVLNARSADDDLPKFVIEEFEISSSLDDAKTVSLGTKSIKGLKLADGTLITCVSSGNLQVRHDK  133 (412)
T ss_pred             hhhhhhhheeecCCceeEeeccccCcccccccccCCccccccccccccccccccccchhhcCCEEEEEecCCcEEEEecc
Confidence            345678888887765  4444 3666666655544            11        11124679999999999999987


Q ss_pred             CCe----EEEEEcccCCcEEEEEEcCCC--EEEEEECC--CeEEEEeCCCc-EEEEEeCC---------CCCEEEEEEeC
Q psy7057          68 SQQ----CKLTIRQHEMAVWGVIQLANG--IIVTGCAD--KTIKLHSEEGE-FLKTLTGH---------TDCVRGLAVLN  129 (557)
Q Consensus        68 ~~~----~~~~l~~h~~~V~~l~~~~~~--~l~sgs~d--g~I~vwd~~~~-~~~~l~~h---------~~~V~~l~~~~  129 (557)
                      .+.    .+..+..+ ..+..+.-.+..  .+++|+..  ..+.+||.... .+..-+.-         .-.++++.|.+
T Consensus       134 ~~d~hss~l~~la~g-~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw~aKNvpnD~L~LrVPvW~tdi~Fl~  212 (412)
T KOG3881|consen  134 SGDLHSSKLIKLATG-PGLYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQIWSAKNVPNDRLGLRVPVWITDIRFLE  212 (412)
T ss_pred             CCccccccceeeecC-CceeeeccCCCCCceEecCchhcccceeeeecccceeeeeccCCCCccccceeeeeeccceecC
Confidence            432    33334333 445556655543  77779998  88999995443 33322211         12355677765


Q ss_pred             C---CeEEEEECCCeEEEEECCCC-eEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC----ceEeeCCcc
Q psy7057         130 D---TDFVSCSNDASIRVWDSTTG-KCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ----NSFMIPAMS  199 (557)
Q Consensus       130 ~---~~lvs~s~Dg~I~vwd~~~~-~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~----~~~~~~~~~  199 (557)
                      .   ..|++++.-+.+|+||.+.+ +++..+.--..++.++..  .++++++|..-+.+..||++..    ..+.+..+.
T Consensus       213 g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~tGs  292 (412)
T KOG3881|consen  213 GSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLLGCGLKGITGS  292 (412)
T ss_pred             CCCCceEEEEecceeEEEecCcccCcceeEeccccCcceeeeecCCCcEEEEecccchhheecccCceeeccccCCccCC
Confidence            4   45999999999999999865 578888777888888887  7889999999999999998876    346677889


Q ss_pred             EEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHhcc
Q psy7057         200 VWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQY  239 (557)
Q Consensus       200 v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~  239 (557)
                      |+++..+|... ++++|-|+.|||+|+.+..++........
T Consensus       293 irsih~hp~~~~las~GLDRyvRIhD~ktrkll~kvYvKs~  333 (412)
T KOG3881|consen  293 IRSIHCHPTHPVLASCGLDRYVRIHDIKTRKLLHKVYVKSR  333 (412)
T ss_pred             cceEEEcCCCceEEeeccceeEEEeecccchhhhhhhhhcc
Confidence            99999999988 88999999999999998666554444433

>KOG2394|consensus

Probab=99.24  E-value=3e-10  Score=115.38  Aligned_cols=161  Identities=19%  Similarity=0.142  Sum_probs=123.6

Q ss_pred             CCCCEEEEEECCCeEEEEECCCCeEEEEE----cccCCcEEEEEEcCCC--EEEEEECCCeEEEEeCC------------
Q psy7057          47 AKVNTLLSASWDMTAKLWCLESQQCKLTI----RQHEMAVWGVIQLANG--IIVTGCADKTIKLHSEE------------  108 (557)
Q Consensus        47 ~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l----~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~~------------  108 (557)
                      +.+--++.|-.-|.+.+.|....+..+.+    .-.+..|+|+.|.|.+  +++.+-++|.+.++|..            
T Consensus       183 ~~g~dllIGf~tGqvq~idp~~~~~sklfne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~  262 (636)
T KOG2394|consen  183 PKGLDLLIGFTTGQVQLIDPINFEVSKLFNEERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQA  262 (636)
T ss_pred             CCCcceEEeeccCceEEecchhhHHHHhhhhcccccccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCcccc
Confidence            44566888888899988887652211111    1135789999999955  88889999999999721            


Q ss_pred             ---CcE--EE------------EEeCCCCCEEEEEEeCCCe-EEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--
Q psy7057         109 ---GEF--LK------------TLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--  168 (557)
Q Consensus       109 ---~~~--~~------------~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--  168 (557)
                         +..  +.            .+.--.+.|..++|+|+|+ |++.|.||.+||+|..+.+.+..++.--+...|++|  
T Consensus       263 ~k~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWSP  342 (636)
T KOG2394|consen  263 LKDGDQFAILTSKSKKTRNPVARWHIGEGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCWSP  342 (636)
T ss_pred             cCCCCeeEEeeeeccccCCccceeEeccccccceeEcCCCceEEEEecCceEEEeeccHHHHHHHHHhhccceEEEEEcC
Confidence               111  11            1111235788999999988 779999999999999988887777777788999999  


Q ss_pred             cCCEEEEEeCCCeEEEEECCCCc---eEeeCCccEEEEEEcC
Q psy7057         169 HGDLITSGGEDQCVCVYQNKAQN---SFMIPAMSVWAVAILP  207 (557)
Q Consensus       169 ~~~~l~s~s~Dg~I~iwd~~~~~---~~~~~~~~v~~v~~~p  207 (557)
                      ||++|++|++|-.|.||.....+   .-++|.+.|..|+|.|
T Consensus       343 DGKyIvtGGEDDLVtVwSf~erRVVARGqGHkSWVs~VaFDp  384 (636)
T KOG2394|consen  343 DGKYIVTGGEDDLVTVWSFEERRVVARGQGHKSWVSVVAFDP  384 (636)
T ss_pred             CccEEEecCCcceEEEEEeccceEEEeccccccceeeEeecc
Confidence            89999999999999999987763   4467899999999997

>KOG3881|consensus

Probab=99.22  E-value=7.3e-10  Score=108.84  Aligned_cols=180  Identities=12%  Similarity=0.179  Sum_probs=141.4

Q ss_pred             cCcccEEEEEEcCCCcEEEEECCCcEEEEcCCC-------------------CCCC-CCCCEEEEEECC--CeEEEEECC
Q psy7057          10 GHSMDVRSLSVTPDGCILSASRDKSAKLWKPND-------------------LSPG-AKVNTLLSASWD--MTAKLWCLE   67 (557)
Q Consensus        10 gH~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~-------------------~~~~-~~~~~l~sgs~D--g~i~iwd~~   67 (557)
                      +-+++|..++.. ||.|++|-.+|.+.+|....                   +.-. .....+++|+..  ..+.+||++
T Consensus       103 l~~~~I~gl~~~-dg~Litc~~sG~l~~~~~k~~d~hss~l~~la~g~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle  181 (412)
T KOG3881|consen  103 LGTKSIKGLKLA-DGTLITCVSSGNLQVRHDKSGDLHSSKLIKLATGPGLYDVRQTDTDPYIVATGGKENINELKIWDLE  181 (412)
T ss_pred             cccccccchhhc-CCEEEEEecCCcEEEEeccCCccccccceeeecCCceeeeccCCCCCceEecCchhcccceeeeecc
Confidence            344555555533 67799999999999998873                   1112 234566779988  889999999


Q ss_pred             CCeEEEEEccc---------CCcEEEEEEcCC--C-EEEEEECCCeEEEEe--CCCcEEEEEeCCCCCEEEEEEeCCCe-
Q psy7057          68 SQQCKLTIRQH---------EMAVWGVIQLAN--G-IIVTGCADKTIKLHS--EEGEFLKTLTGHTDCVRGLAVLNDTD-  132 (557)
Q Consensus        68 ~~~~~~~l~~h---------~~~V~~l~~~~~--~-~l~sgs~dg~I~vwd--~~~~~~~~l~~h~~~V~~l~~~~~~~-  132 (557)
                      ..+.+.+-+.-         .--++++.|.+.  . .|++++.-+.+|+||  ...+++..+.--+.+++++...|++. 
T Consensus       182 ~~~qiw~aKNvpnD~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E~~is~~~l~p~gn~  261 (412)
T KOG3881|consen  182 QSKQIWSAKNVPNDRLGLRVPVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFLENPISSTGLTPSGNF  261 (412)
T ss_pred             cceeeeeccCCCCccccceeeeeeccceecCCCCCceEEEEecceeEEEecCcccCcceeEeccccCcceeeeecCCCcE
Confidence            88666543321         123456788876  4 999999999999999  34467777777788999999999977 


Q ss_pred             EEEEECCCeEEEEECCCCeEEEE-EeCCCCcEEEEEEcCC--EEEEEeCCCeEEEEECCCC
Q psy7057         133 FVSCSNDASIRVWDSTTGKCVHT-MYGHPNFIYSVAAHGD--LITSGGEDQCVCVYQNKAQ  190 (557)
Q Consensus       133 lvs~s~Dg~I~vwd~~~~~~~~~-~~~h~~~V~~l~~~~~--~l~s~s~Dg~I~iwd~~~~  190 (557)
                      +++|..-+.+..+|++.++.... +.+..+.|++|..++.  ++++|+-|+.+||+|..+.
T Consensus       262 Iy~gn~~g~l~~FD~r~~kl~g~~~kg~tGsirsih~hp~~~~las~GLDRyvRIhD~ktr  322 (412)
T KOG3881|consen  262 IYTGNTKGQLAKFDLRGGKLLGCGLKGITGSIRSIHCHPTHPVLASCGLDRYVRIHDIKTR  322 (412)
T ss_pred             EEEecccchhheecccCceeeccccCCccCCcceEEEcCCCceEEeeccceeEEEeecccc
Confidence            55888999999999999998777 8889999999999665  9999999999999998774

>KOG1409|consensus

Probab=99.21  E-value=4.7e-10  Score=108.46  Aligned_cols=186  Identities=20%  Similarity=0.297  Sum_probs=141.2

Q ss_pred             EEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC------------------CCCCCCCCEEEEEECCCeEEE
Q psy7057           3 KLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND------------------LSPGAKVNTLLSASWDMTAKL   63 (557)
Q Consensus         3 kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~------------------~~~~~~~~~l~sgs~Dg~i~i   63 (557)
                      .+.+.++||.+.|++...-|... +++.+.|.++|||--.+                  +++..+...|+.|-..|++.-
T Consensus        15 ~ll~~~eG~~d~vn~~~l~~~e~gv~~~s~drtvrv~lkrds~q~wpsI~~~mP~~~~~~~y~~e~~~L~vg~~ngtvte   94 (404)
T KOG1409|consen   15 ELLSKIEGSQDDVNAAILIPKEEGVISVSEDRTVRVWLKRDSGQYWPSIYHYMPSPCSAMEYVSESRRLYVGQDNGTVTE   94 (404)
T ss_pred             hhhhhhcCchhhhhhheeccCCCCeEEccccceeeeEEeccccccCchhhhhCCCCceEeeeeccceEEEEEEecceEEE
Confidence            35677899999999988888665 99999999999995443                  455556678888988999888


Q ss_pred             EECCC----CeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe--------------------------------
Q psy7057          64 WCLES----QQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS--------------------------------  106 (557)
Q Consensus        64 wd~~~----~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd--------------------------------  106 (557)
                      +.+..    ....+....|...|..+.|+... .+++.+.|..+.---                                
T Consensus        95 fs~sedfnkm~~~r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~~~~~~t~~~~d~~~~fvGd~~  174 (404)
T KOG1409|consen   95 FALSEDFNKMTFLKDYLAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGGYNFETPASALQFDALYAFVGDHS  174 (404)
T ss_pred             EEhhhhhhhcchhhhhhhhhcceeeEEecCCceeEEEeccccceEEEeeccCCcccceEeeccCCCCceeeEEEEecccc
Confidence            76532    33445556688888888877644 666666664432110                                


Q ss_pred             ----------CCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEEEEECCCCe-EEEEEeCCCCcEEEEEE--cCCE
Q psy7057         107 ----------EEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGK-CVHTMYGHPNFIYSVAA--HGDL  172 (557)
Q Consensus       107 ----------~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~-~~~~~~~h~~~V~~l~~--~~~~  172 (557)
                                ..-.++.++.+|.+.+.+++|.+... +++|..|..+.+||+...+ ....+.+|...|..++.  .-..
T Consensus       175 gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~~~~t~~  254 (404)
T KOG1409|consen  175 GQITMLKLEQNGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQALSYAQHTRQ  254 (404)
T ss_pred             cceEEEEEeecCCceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeeccchhhhhhhhhhhhhee
Confidence                      11123556789999999999998755 6799999999999986544 45677899999999988  5578


Q ss_pred             EEEEeCCCeEEEEECC
Q psy7057         173 ITSGGEDQCVCVYQNK  188 (557)
Q Consensus       173 l~s~s~Dg~I~iwd~~  188 (557)
                      +++++.||.|.+|+..
T Consensus       255 l~S~~edg~i~~w~mn  270 (404)
T KOG1409|consen  255 LISCGEDGGIVVWNMN  270 (404)
T ss_pred             eeeccCCCeEEEEecc
Confidence            9999999999999954

>KOG4227|consensus

Probab=99.18  E-value=1.1e-09  Score=107.13  Aligned_cols=214  Identities=11%  Similarity=0.092  Sum_probs=157.4

Q ss_pred             CcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC------------------CCCCCCCCEEEEEECCCeEEEEECCCCe-
Q psy7057          11 HSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND------------------LSPGAKVNTLLSASWDMTAKLWCLESQQ-   70 (557)
Q Consensus        11 H~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~------------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~-   70 (557)
                      |...|.|++|...++ |++|..+++|.+-|+.+                  +..+|..+.+++.+.++.|.+||.+... 
T Consensus       104 H~SNIF~L~F~~~N~~~~SG~~~~~VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~  183 (609)
T KOG4227|consen  104 HRSNIFSLEFDLENRFLYSGERWGTVIKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQN  183 (609)
T ss_pred             cccceEEEEEccCCeeEecCCCcceeEeeecccceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCCC
Confidence            568999999998877 88999999999999887                  6777888999999999999999987643 


Q ss_pred             --EEEEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEeCCCc--EEEE------EeCCCCCEEEEEEeCCCe-EEEEE
Q psy7057          71 --CKLTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHSEEGE--FLKT------LTGHTDCVRGLAVLNDTD-FVSCS  137 (557)
Q Consensus        71 --~~~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~~~~--~~~~------l~~h~~~V~~l~~~~~~~-lvs~s  137 (557)
                        ....+........++.|.|..  +|++.+..+-+.+||....  ++..      |......-.++.|+|+|. |++--
T Consensus       184 ~~~~~~~AN~~~~F~t~~F~P~~P~Li~~~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~msiR  263 (609)
T KOG4227|consen  184 PISLVLPANSGKNFYTAEFHPETPALILVNSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPSGNQFMSIR  263 (609)
T ss_pred             CCceeeecCCCccceeeeecCCCceeEEeccccCCCCceeeccccchHHhhhccccCcccchhhhheeeCCCCCeehhhh
Confidence              122233345667788999966  8999999999999994332  2221      111122235678888865 77766


Q ss_pred             CCCeEEEEECCCCeEE-EEEeCCC-------CcEEEEEE-cCCEEEEEeCCCeEEEEECCCC------------------
Q psy7057         138 NDASIRVWDSTTGKCV-HTMYGHP-------NFIYSVAA-HGDLITSGGEDQCVCVYQNKAQ------------------  190 (557)
Q Consensus       138 ~Dg~I~vwd~~~~~~~-~~~~~h~-------~~V~~l~~-~~~~l~s~s~Dg~I~iwd~~~~------------------  190 (557)
                      ....-.+||+.+.+|. ..+ .|.       ..+.+++| +...+++|+.+-.|++|.+...                  
T Consensus       264 R~~~P~~~D~~S~R~~V~k~-D~N~~GY~N~~T~KS~~F~~D~~v~tGSD~~~i~~WklP~~~ds~G~~~IG~~~~~~~~  342 (609)
T KOG4227|consen  264 RGKCPLYFDFISQRCFVLKS-DHNPNGYCNIKTIKSMTFIDDYTVATGSDHWGIHIWKLPRANDSYGFTQIGHDEEEMPS  342 (609)
T ss_pred             ccCCCEEeeeecccceeEec-cCCCCcceeeeeeeeeeeecceeeeccCcccceEEEecCCCccccCccccCcchhhCch
Confidence            6666677888765543 333 232       24567777 4446999999999999983210                  


Q ss_pred             --------ceEeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEec
Q psy7057         191 --------NSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSA  225 (557)
Q Consensus       191 --------~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~  225 (557)
                              ..+++|.+-+..|.|+|... |++++-.+.++||.-
T Consensus       343 ~~~i~~~~~VLrGHRSv~NQVRF~~H~~~l~SSGVE~~~KlWS~  386 (609)
T KOG4227|consen  343 EIFIEKELTVLRGHRSVPNQVRFSQHNNLLVSSGVENSFKLWSD  386 (609)
T ss_pred             hheecceeEEEecccccccceeecCCcceEeccchhhheecccc
Confidence                    24567888889999999988 778888999999964

>KOG1240|consensus

Probab=99.17  E-value=2.4e-09  Score=118.22  Aligned_cols=208  Identities=15%  Similarity=0.160  Sum_probs=146.2

Q ss_pred             EECCCCeEEEEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEeC---CCc-----EEEEEeCCCCCEEEEEEeCCCe-
Q psy7057          64 WCLESQQCKLTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHSE---EGE-----FLKTLTGHTDCVRGLAVLNDTD-  132 (557)
Q Consensus        64 wd~~~~~~~~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~---~~~-----~~~~l~~h~~~V~~l~~~~~~~-  132 (557)
                      |++ .|..+..+..|+..|..++.+++.  +++|||.||+|++|+.   .+.     ...++......+.++...+.+. 
T Consensus      1034 W~p-~G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~ 1112 (1431)
T KOG1240|consen 1034 WNP-RGILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQ 1112 (1431)
T ss_pred             CCc-cceEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCe
Confidence            554 467888899999999999888754  9999999999999992   222     2334444567788888887754 


Q ss_pred             EEEEECCCeEEEEECCCC-------eEEEEEeCC-CCcEEEE-EE---cCC-EEEEEeCCCeEEEEECCCC-----ceEe
Q psy7057         133 FVSCSNDASIRVWDSTTG-------KCVHTMYGH-PNFIYSV-AA---HGD-LITSGGEDQCVCVYQNKAQ-----NSFM  194 (557)
Q Consensus       133 lvs~s~Dg~I~vwd~~~~-------~~~~~~~~h-~~~V~~l-~~---~~~-~l~s~s~Dg~I~iwd~~~~-----~~~~  194 (557)
                      ++.++.||.|++.++...       .+.+....+ .+.+.+| ++   ... .++.+..-+.|..||++..     ....
T Consensus      1113 ~Av~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~ 1192 (1431)
T KOG1240|consen 1113 FAVSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQ 1192 (1431)
T ss_pred             EEEEcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcC
Confidence            889999999999988651       122222222 2333333 33   334 6888888899999998766     2333


Q ss_pred             eCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCC---ceeEEEEe-CCCcEEEEe
Q psy7057         195 IPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQ---EIGGVKVS-DDGIVRVFS  269 (557)
Q Consensus       195 ~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~---~~~~vs~s-~DG~IrvW~  269 (557)
                      ...+.|++++.+|.+. +++|.+.|.+-+||++-..+......... ..+..+...+..   .....+++ ..+.|.+|+
T Consensus      1193 ~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~-~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~wn 1271 (1431)
T KOG1240|consen 1193 LRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPAR-APIRHVWLCPTYPQESVSVSAGSSSNNEVSTWN 1271 (1431)
T ss_pred             ccccceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCccc-CCcceEEeeccCCCCceEEEecccCCCceeeee
Confidence            4456899999999998 99999999999999997766655544433 344444433332   23334444 688999999


Q ss_pred             cCCC
Q psy7057         270 ANPD  273 (557)
Q Consensus       270 ~~~~  273 (557)
                      +..+
T Consensus      1272 ~~~g 1275 (1431)
T KOG1240|consen 1272 METG 1275 (1431)
T ss_pred             cccC
Confidence            8876

>PRK03629 tolB translocation protein TolB; Provisional

Probab=99.14  E-value=7.7e-09  Score=109.78  Aligned_cols=199  Identities=12%  Similarity=0.034  Sum_probs=131.7

Q ss_pred             EEeccCcccEEEEEEcCCCc-EEEEE---CCCcEEEEcCCC---------------CCCCCCCCEEEEE-ECCC--eEEE
Q psy7057           6 TALYGHSMDVRSLSVTPDGC-ILSAS---RDKSAKLWKPND---------------LSPGAKVNTLLSA-SWDM--TAKL   63 (557)
Q Consensus         6 ~~l~gH~~~V~~l~~spdg~-l~sgs---~Dg~V~iWd~~~---------------~~~~~~~~~l~sg-s~Dg--~i~i   63 (557)
                      +.+..+...+.+.+|+|||+ |+..+   .+..|.+|++.+               ..++|++..|+.. +.++  .|.+
T Consensus       192 ~~lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l~~~~~~~~~~~~SPDG~~La~~~~~~g~~~I~~  271 (429)
T PRK03629        192 FVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYV  271 (429)
T ss_pred             EEeecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEEccCCCCCcCCeEECCCCCEEEEEEcCCCCcEEEE
Confidence            34555667899999999998 66443   345788898765               4678889888765 4454  5888


Q ss_pred             EECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEEC-CCeEEEE--eCCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEEC
Q psy7057          64 WCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCA-DKTIKLH--SEEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSN  138 (557)
Q Consensus        64 wd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~-dg~I~vw--d~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~  138 (557)
                      ||+.+++... +..+...+....|+|+| .|+..+. ++...+|  +..+.....+..+.....+..|+|++. ++..+.
T Consensus       272 ~d~~tg~~~~-lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~~~lt~~~~~~~~~~~SpDG~~Ia~~~~  350 (429)
T PRK03629        272 MDLASGQIRQ-VTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSS  350 (429)
T ss_pred             EECCCCCEEE-ccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCeEEeecCCCCccCEEECCCCCEEEEEEc
Confidence            9998876544 44445567889999999 5665554 3444555  555544555554555567789999987 444333


Q ss_pred             -C--CeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCe---EEEEECCCC--ceEeeCCccEEEEEEcC
Q psy7057         139 -D--ASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQC---VCVYQNKAQ--NSFMIPAMSVWAVAILP  207 (557)
Q Consensus       139 -D--g~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~---I~iwd~~~~--~~~~~~~~~v~~v~~~p  207 (557)
                       +  ..|.+||+.+++.. .+... .......|  +|+.|+.++.++.   +.++++...  +.+..+...+...+|+|
T Consensus       351 ~~g~~~I~~~dl~~g~~~-~Lt~~-~~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~~~G~~~~~l~~~~~~~~~p~Wsp  427 (429)
T PRK03629        351 NGGQQHIAKQDLATGGVQ-VLTDT-FLDETPSIAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWSP  427 (429)
T ss_pred             cCCCceEEEEECCCCCeE-EeCCC-CCCCCceECCCCCEEEEEEcCCCceEEEEEECCCCCeEECccCCCCcCCcccCC
Confidence             2  35888998877643 33321 11223444  8888888887764   667775433  55666677788888887

>KOG4547|consensus

Probab=99.13  E-value=7.8e-09  Score=106.72  Aligned_cols=160  Identities=16%  Similarity=0.220  Sum_probs=131.5

Q ss_pred             EEEEECCCcEEEEcCCC---------------------------------------CCCCCCCCEEEEEECCCeEEEEEC
Q psy7057          26 ILSASRDKSAKLWKPND---------------------------------------LSPGAKVNTLLSASWDMTAKLWCL   66 (557)
Q Consensus        26 l~sgs~Dg~V~iWd~~~---------------------------------------~~~~~~~~~l~sgs~Dg~i~iwd~   66 (557)
                      +|....||.+|+|+...                                       -..+.+...++-|...|.|.+++.
T Consensus         8 ~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~v~~ys~   87 (541)
T KOG4547|consen    8 FALSTGDGRLRIWDTAKNQLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGSVLLYSV   87 (541)
T ss_pred             EeecCCCCeEEEEEccCceeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCccEEEEEe
Confidence            77888999999999876                                       011123456888999999999999


Q ss_pred             CCCeEEEEEc--ccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCCe
Q psy7057          67 ESQQCKLTIR--QHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDAS  141 (557)
Q Consensus        67 ~~~~~~~~l~--~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~  141 (557)
                      ..++....+.  .|.+.|.++.+..+- .|.|++.|+.+..|+ .....++........+.+++++|++. ++++|  +.
T Consensus        88 ~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~~sl~is~D~~~l~~as--~~  165 (541)
T KOG4547|consen   88 AGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPLVSSLCISPDGKILLTAS--RQ  165 (541)
T ss_pred             cCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCccceEEEcCCCCEEEecc--ce
Confidence            9999888775  589999999987754 999999999999999 56667788888889999999999976 55666  68


Q ss_pred             EEEEECCCCeEEEEEeCCCCcEEEEEE--c-----CCEEEE-EeCCCeEEEEEC
Q psy7057         142 IRVWDSTTGKCVHTMYGHPNFIYSVAA--H-----GDLITS-GGEDQCVCVYQN  187 (557)
Q Consensus       142 I~vwd~~~~~~~~~~~~h~~~V~~l~~--~-----~~~l~s-~s~Dg~I~iwd~  187 (557)
                      |++||+.+++.+.+|.+|.++|++++|  .     |.++++ ...+.-+.+|-.
T Consensus       166 ik~~~~~~kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v  219 (541)
T KOG4547|consen  166 IKVLDIETKEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVV  219 (541)
T ss_pred             EEEEEccCceEEEEecCCCcceEEEEEEEeccccccceeeeccccccceeEEEE
Confidence            999999999999999999999999999  3     455554 445666777763

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=99.13  E-value=5.2e-08  Score=100.83  Aligned_cols=271  Identities=16%  Similarity=0.111  Sum_probs=160.3

Q ss_pred             cEEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC---------------CCCCCCCCEEEEEE-CCCeEEEE
Q psy7057           2 YKLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND---------------LSPGAKVNTLLSAS-WDMTAKLW   64 (557)
Q Consensus         2 ~kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~---------------~~~~~~~~~l~sgs-~Dg~i~iw   64 (557)
                      .++..++......-..++|+|||+ ++++++||.|.++|+.+               ++.+++++++++++ ..+++.++
T Consensus        26 ~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G~~~~~i~~s~DG~~~~v~n~~~~~v~v~  105 (369)
T PF02239_consen   26 NKVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKVGGNPRGIAVSPDGKYVYVANYEPGTVSVI  105 (369)
T ss_dssp             -SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-SSEEEEEEE--TTTEEEEEEEETTEEEEE
T ss_pred             CeEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEecCCCcceEEEcCCCCEEEEEecCCCceeEe
Confidence            356677765544445578999998 77889999999999987               67778899988776 68999999


Q ss_pred             ECCCCeEEEEEccc-------CCcEEEEEEcCCC-EEEEEEC-CCeEEEEeCC-C-cEEEEEeCCCCCEEEEEEeCCCe-
Q psy7057          65 CLESQQCKLTIRQH-------EMAVWGVIQLANG-IIVTGCA-DKTIKLHSEE-G-EFLKTLTGHTDCVRGLAVLNDTD-  132 (557)
Q Consensus        65 d~~~~~~~~~l~~h-------~~~V~~l~~~~~~-~l~sgs~-dg~I~vwd~~-~-~~~~~l~~h~~~V~~l~~~~~~~-  132 (557)
                      |.++.+.+..+...       ...+.++..++.+ .++..-. .+.|-+-|.. . .................|.|+++ 
T Consensus       106 D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~~~~~~i~~g~~~~D~~~dpdgry  185 (369)
T PF02239_consen  106 DAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKNLKVTTIKVGRFPHDGGFDPDGRY  185 (369)
T ss_dssp             ETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSCEEEEEEE--TTEEEEEE-TTSSE
T ss_pred             ccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEeccccccceeeecccccccccccCcccce
Confidence            99999988887543       3467888888876 4554444 4778777732 2 22223333456678899999987 


Q ss_pred             EE-EEECCCeEEEEECCCCeEEEEEe----CCCCcEEEE-----------EEcCCEEEEEeCCCeEEEEECCCC---ceE
Q psy7057         133 FV-SCSNDASIRVWDSTTGKCVHTMY----GHPNFIYSV-----------AAHGDLITSGGEDQCVCVYQNKAQ---NSF  193 (557)
Q Consensus       133 lv-s~s~Dg~I~vwd~~~~~~~~~~~----~h~~~V~~l-----------~~~~~~l~s~s~Dg~I~iwd~~~~---~~~  193 (557)
                      |+ +...+..|-++|..+++.+..+.    .|...+..+           .-.+...++.-....+.+|+....   +++
T Consensus       186 ~~va~~~sn~i~viD~~~~k~v~~i~~g~~p~~~~~~~~php~~g~vw~~~~~~~~~~~~ig~~~v~v~d~~~wkvv~~I  265 (369)
T PF02239_consen  186 FLVAANGSNKIAVIDTKTGKLVALIDTGKKPHPGPGANFPHPGFGPVWATSGLGYFAIPLIGTDPVSVHDDYAWKVVKTI  265 (369)
T ss_dssp             EEEEEGGGTEEEEEETTTTEEEEEEE-SSSBEETTEEEEEETTTEEEEEEEBSSSSEEEEEE--TTT-STTTBTSEEEEE
T ss_pred             eeecccccceeEEEeeccceEEEEeeccccccccccccccCCCcceEEeeccccceecccccCCccccchhhcCeEEEEE
Confidence            33 45567789999999988776653    233333333           222222222222234455665544   566


Q ss_pred             eeCCccEEEEEEcCCCc-EEEE----EcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEe-CCCcEEE
Q psy7057         194 MIPAMSVWAVAILPNSD-IVTG----SSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVS-DDGIVRV  267 (557)
Q Consensus       194 ~~~~~~v~~v~~~p~g~-l~sg----~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s-~DG~Irv  267 (557)
                      .....+ .-+..+|+++ +.+.    ...++|.++|..+.+......... ...+..+.+.++.....+|.- .+|.|.|
T Consensus       266 ~~~G~g-lFi~thP~s~~vwvd~~~~~~~~~v~viD~~tl~~~~~i~~~~-~~~~~h~ef~~dG~~v~vS~~~~~~~i~v  343 (369)
T PF02239_consen  266 PTQGGG-LFIKTHPDSRYVWVDTFLNPDADTVQVIDKKTLKVVKTITPGP-GKRVVHMEFNPDGKEVWVSVWDGNGAIVV  343 (369)
T ss_dssp             E-SSSS---EE--TT-SEEEEE-TT-SSHT-EEEEECCGTEEEE-HHHHH-T--EEEEEE-TTSSEEEEEEE--TTEEEE
T ss_pred             ECCCCc-ceeecCCCCccEEeeccCCCCCceEEEEECcCcceeEEEeccC-CCcEeccEECCCCCEEEEEEecCCCEEEE
Confidence            666656 7788899998 5555    456899999999875543332211 123556667777766666655 4459999


Q ss_pred             EecCCCh
Q psy7057         268 FSANPDR  274 (557)
Q Consensus       268 W~~~~~~  274 (557)
                      ||..+-+
T Consensus       344 ~D~~Tl~  350 (369)
T PF02239_consen  344 YDAKTLK  350 (369)
T ss_dssp             EETTTTE
T ss_pred             EECCCcE
Confidence            9977643

...

>KOG0974|consensus

Probab=99.12  E-value=8.4e-10  Score=120.22  Aligned_cols=162  Identities=19%  Similarity=0.303  Sum_probs=133.4

Q ss_pred             cEEEEECCCcEEEEcCCC--------------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEE
Q psy7057          25 CILSASRDKSAKLWKPND--------------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWG   84 (557)
Q Consensus        25 ~l~sgs~Dg~V~iWd~~~--------------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~   84 (557)
                      +++.++.++.+-+||...                    +-.++..-++++|+--+.|.+|++...+.-..+.+|++.|.+
T Consensus       101 ~i~l~~~~ns~~i~d~~~~~~~~~i~~~er~~l~~~~~~g~s~~~~~i~~gsv~~~iivW~~~~dn~p~~l~GHeG~iF~  180 (967)
T KOG0974|consen  101 KIALVTSRNSLLIRDSKNSSVLSKIQSDERCTLYSSLIIGDSAEELYIASGSVFGEIIVWKPHEDNKPIRLKGHEGSIFS  180 (967)
T ss_pred             eEEEEEcCceEEEEecccCceehhcCCCceEEEEeEEEEeccCcEEEEEeccccccEEEEeccccCCcceecccCCceEE
Confidence            388899999999999876                    223445567899999999999998744433468999999999


Q ss_pred             EEEcCCC-EEEEEECCCeEEEEeCC-CcEE-EEEeCCCCCEEEEEEeCCCeEEEEECCCeEEEEECCCCeEEEEEeCCC-
Q psy7057          85 VIQLANG-IIVTGCADKTIKLHSEE-GEFL-KTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHP-  160 (557)
Q Consensus        85 l~~~~~~-~l~sgs~dg~I~vwd~~-~~~~-~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~~~~~~~~h~-  160 (557)
                      +.++.+| ++++.|.|.++|+|+.. .+.. .+..+|+..|+.++++|. .+++++.|.+.++|+. .++.+.++..|. 
T Consensus       181 i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n-~i~t~gedctcrvW~~-~~~~l~~y~~h~g  258 (967)
T KOG0974|consen  181 IVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPN-RIITVGEDCTCRVWGV-NGTQLEVYDEHSG  258 (967)
T ss_pred             EEEccCCcEEEEEecCcceeeeecccccccCcccccccceeEEEEeccc-eeEEeccceEEEEEec-ccceehhhhhhhh
Confidence            9999998 99999999999999943 3333 367789999999999998 8999999999999974 466677888885 


Q ss_pred             CcEEEEEE--cCCEEEEEeCCCeEEEEECC
Q psy7057         161 NFIYSVAA--HGDLITSGGEDQCVCVYQNK  188 (557)
Q Consensus       161 ~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~  188 (557)
                      ..++.++.  ....++|++.|+.+++|++.
T Consensus       259 ~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~  288 (967)
T KOG0974|consen  259 KGIWKIAVPIGVIIKVTGGNDSTLKLWDLN  288 (967)
T ss_pred             cceeEEEEcCCceEEEeeccCcchhhhhhh
Confidence            57888888  33478899999999999943

>PRK05137 tolB translocation protein TolB; Provisional

Probab=99.08  E-value=3.7e-08  Score=104.93  Aligned_cols=184  Identities=12%  Similarity=0.025  Sum_probs=117.0

Q ss_pred             CCCCCCCEEEEEEC---CCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EE-EEEECCCe--EEEEeCCCcEEEEEe
Q psy7057          44 SPGAKVNTLLSASW---DMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-II-VTGCADKT--IKLHSEEGEFLKTLT  116 (557)
Q Consensus        44 ~~~~~~~~l~sgs~---Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l-~sgs~dg~--I~vwd~~~~~~~~l~  116 (557)
                      .++|+++.|+..+.   +..|.+||+.+++.. .+..+...+.+.+|+|+| .| ++.+.++.  |.+||..+.....+.
T Consensus       208 ~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~-~l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~~~Lt  286 (435)
T PRK05137        208 RFSPNRQEITYMSYANGRPRVYLLDLETGQRE-LVGNFPGMTFAPRFSPDGRKVVMSLSQGGNTDIYTMDLRSGTTTRLT  286 (435)
T ss_pred             EECCCCCEEEEEEecCCCCEEEEEECCCCcEE-EeecCCCcccCcEECCCCCEEEEEEecCCCceEEEEECCCCceEEcc
Confidence            34445555555442   357888998877643 344566677889999999 44 56666665  666787666667777


Q ss_pred             CCCCCEEEEEEeCCCe-EEEEE-CCC--eEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCC---CeEEEEEC
Q psy7057         117 GHTDCVRGLAVLNDTD-FVSCS-NDA--SIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGED---QCVCVYQN  187 (557)
Q Consensus       117 ~h~~~V~~l~~~~~~~-lvs~s-~Dg--~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~D---g~I~iwd~  187 (557)
                      .+........|+|++. ++..+ .++  .|.++|+.+++.. .+..+...+....|  +|+.|+..+.+   ..|.+|++
T Consensus       287 ~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~~-~lt~~~~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~  365 (435)
T PRK05137        287 DSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNPR-RISFGGGRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKP  365 (435)
T ss_pred             CCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCeE-EeecCCCcccCeEECCCCCEEEEEEcCCCceEEEEEEC
Confidence            7777778899999987 55444 333  5888897765543 34334444555566  77877766543   36888886


Q ss_pred             CCC-ceEeeCCccEEEEEEcCCCc-EEEEEc-C-----CcEEEEecCCCC
Q psy7057         188 KAQ-NSFMIPAMSVWAVAILPNSD-IVTGSS-D-----GIVRVFSANPDR  229 (557)
Q Consensus       188 ~~~-~~~~~~~~~v~~v~~~p~g~-l~sg~~-D-----g~I~iwd~~~~~  229 (557)
                      ... .........+....|+|+|+ |+..+. .     ..++++++....
T Consensus       366 ~~~~~~~lt~~~~~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~dl~g~~  415 (435)
T PRK05137        366 DGSGERILTSGFLVEGPTWAPNGRVIMFFRQTPGSGGAPKLYTVDLTGRN  415 (435)
T ss_pred             CCCceEeccCCCCCCCCeECCCCCEEEEEEccCCCCCcceEEEEECCCCc
Confidence            443 22222233567889999998 444333 2     257777776543

>KOG0309|consensus

Probab=99.07  E-value=1e-09  Score=115.02  Aligned_cols=261  Identities=15%  Similarity=0.209  Sum_probs=179.2

Q ss_pred             cccEEEEEEcCCCc-EEEEECCCcEEEEcCCC--------------------CCCCCCCCEEEEEECCCeEEEEECCC--
Q psy7057          12 SMDVRSLSVTPDGC-ILSASRDKSAKLWKPND--------------------LSPGAKVNTLLSASWDMTAKLWCLES--   68 (557)
Q Consensus        12 ~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~--------------------~~~~~~~~~l~sgs~Dg~i~iwd~~~--   68 (557)
                      .+.+.++.++|.|+ ++.+++-|...+ |+..                    +++++...+-++........+|++..  
T Consensus        24 ~~~~~a~si~p~grdi~lAsr~gl~i~-dld~p~~ppr~l~h~tpw~vad~qws~h~a~~~wiVsts~qkaiiwnlA~ss  102 (1081)
T KOG0309|consen   24 DGGFNAVSINPSGRDIVLASRQGLYII-DLDDPFTPPRWLHHITPWQVADVQWSPHPAKPYWIVSTSNQKAIIWNLAKSS  102 (1081)
T ss_pred             cCcccceeeccccchhhhhhhcCeEEE-eccCCCCCceeeeccCcchhcceecccCCCCceeEEecCcchhhhhhhhcCC
Confidence            35778899999998 888887775544 3322                    44445555555555566677898754  


Q ss_pred             -CeEEEEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEeCCC--cEEEEEeCCCCCEEEEEEeCC-CeEEEEECCCeE
Q psy7057          69 -QQCKLTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHSEEG--EFLKTLTGHTDCVRGLAVLND-TDFVSCSNDASI  142 (557)
Q Consensus        69 -~~~~~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~~~--~~~~~l~~h~~~V~~l~~~~~-~~lvs~s~Dg~I  142 (557)
                       ......+.+|...|+.+-|.|+.  .+++++.|..+..||...  .++.....-...-..+.|+-. +.+++.+....|
T Consensus       103 ~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vlasshg~~i  182 (1081)
T KOG0309|consen  103 SNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLASSHGNDI  182 (1081)
T ss_pred             ccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeecccccCceeeecccCcchhhhccCCce
Confidence             34567788999999999999987  899999999999999443  455555554555677888743 557777788889


Q ss_pred             EEEECCCC-eEEEEEeCCCCcEEEEEEc---CCEEEEEeCCCeEEEEECCCC----ceEeeCCccEEEEEEcCCCc-EEE
Q psy7057         143 RVWDSTTG-KCVHTMYGHPNFIYSVAAH---GDLITSGGEDQCVCVYQNKAQ----NSFMIPAMSVWAVAILPNSD-IVT  213 (557)
Q Consensus       143 ~vwd~~~~-~~~~~~~~h~~~V~~l~~~---~~~l~s~s~Dg~I~iwd~~~~----~~~~~~~~~v~~v~~~p~g~-l~s  213 (557)
                      ++||.+.| .++..+++|...|..+.|+   -..+++++.|++|+.||....    ........+|+.-++.|-|+ ..+
T Consensus       183 ~vwd~r~gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~e~~~~vtt~~piw~~r~~Pfg~g~~~  262 (1081)
T KOG0309|consen  183 FVWDLRKGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTTESKRTVTTNFPIWRGRYLPFGEGYCI  262 (1081)
T ss_pred             EEEeccCCCcceEEecccceeeehHHHhhhhhhhhcccCCCCceeeecccccccccceeccccCcceeccccccCceeEe
Confidence            99999875 5788999999999999983   346999999999999995433    44444566889889998776 221


Q ss_pred             --EEcCCcEEEEecCCCCc--------chhHHHhcccceeEEEec---------cCCCceeEEEEeCCCcEEEEecCCC
Q psy7057         214 --GSSDGIVRVFSANPDRQ--------AEDAVQAQYAEEVKKLKS---------ANEQEIGGVKVSDDGIVRVFSANPD  273 (557)
Q Consensus       214 --g~~Dg~I~iwd~~~~~~--------~~~~~~~~~~~~v~~l~~---------~~~~~~~~vs~s~DG~IrvW~~~~~  273 (557)
                        --.+..+.+.+.+....        .......+|...|....+         .......+||.|.|-.+|+|-++..
T Consensus       263 mp~~G~n~v~~~~c~n~d~e~n~~~~~~pVh~F~GH~D~V~eFlWR~r~e~~~d~d~rdfQLVTWSkD~~lrlWpI~~~  341 (1081)
T KOG0309|consen  263 MPMVGGNMVPQLRCENSDLEWNVFDLNTPVHTFVGHDDVVLEFLWRKRKECDGDYDSRDFQLVTWSKDQTLRLWPIDSQ  341 (1081)
T ss_pred             ccccCCeeeeeccccchhhhhccccCCcceeeecCcchHHHHHhhhhcccccCCCCccceeEEEeecCCceEeeeccHH
Confidence              11122555554433211        112223334333332222         1223456799999999999998764

>PRK04922 tolB translocation protein TolB; Provisional

Probab=99.06  E-value=1.3e-08  Score=108.33  Aligned_cols=199  Identities=16%  Similarity=0.075  Sum_probs=128.0

Q ss_pred             EEeccCcccEEEEEEcCCCc-EEEEEC---CCcEEEEcCCC---------------CCCCCCCCEEE-EEECCC--eEEE
Q psy7057           6 TALYGHSMDVRSLSVTPDGC-ILSASR---DKSAKLWKPND---------------LSPGAKVNTLL-SASWDM--TAKL   63 (557)
Q Consensus         6 ~~l~gH~~~V~~l~~spdg~-l~sgs~---Dg~V~iWd~~~---------------~~~~~~~~~l~-sgs~Dg--~i~i   63 (557)
                      +.+..|...+.+.+|+|||+ |+.++.   ...|.+|++.+               ..++++++.|+ +.+.++  .|.+
T Consensus       197 ~~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~l~~~~g~~~~~~~SpDG~~l~~~~s~~g~~~Iy~  276 (433)
T PRK04922        197 QTILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQRELVASFRGINGAPSFSPDGRRLALTLSRDGNPEIYV  276 (433)
T ss_pred             eEeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEEeccCCCCccCceECCCCCEEEEEEeCCCCceEEE
Confidence            44666777899999999998 776663   34699999865               46778888775 556665  5999


Q ss_pred             EECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEE-CCCe--EEEEeCCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEEC
Q psy7057          64 WCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGC-ADKT--IKLHSEEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSN  138 (557)
Q Consensus        64 wd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs-~dg~--I~vwd~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~  138 (557)
                      ||+.+++. ..+..+.......+|+|++ .|+..+ .++.  |.+++..+.....+..+.......+|+|++. ++..+.
T Consensus       277 ~d~~~g~~-~~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~~lt~~g~~~~~~~~SpDG~~Ia~~~~  355 (433)
T PRK04922        277 MDLGSRQL-TRLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAERLTFQGNYNARASVSPDGKKIAMVHG  355 (433)
T ss_pred             EECCCCCe-EECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeEEeecCCCCccCEEECCCCCEEEEEEC
Confidence            99988764 4455565556778999998 566555 4455  5556654443444433344455789999987 443333


Q ss_pred             C---CeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCC---CeEEEEECCCC--ceEeeCCccEEEEEEcC
Q psy7057         139 D---ASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGED---QCVCVYQNKAQ--NSFMIPAMSVWAVAILP  207 (557)
Q Consensus       139 D---g~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~D---g~I~iwd~~~~--~~~~~~~~~v~~v~~~p  207 (557)
                      +   ..|.+||+.+++.. .+. +........|  +|+.++..+.+   ..|.++++...  +.+..+...+...+|+|
T Consensus       356 ~~~~~~I~v~d~~~g~~~-~Lt-~~~~~~~p~~spdG~~i~~~s~~~g~~~L~~~~~~g~~~~~l~~~~g~~~~p~wsp  432 (433)
T PRK04922        356 SGGQYRIAVMDLSTGSVR-TLT-PGSLDESPSFAPNGSMVLYATREGGRGVLAAVSTDGRVRQRLVSADGEVREPAWSP  432 (433)
T ss_pred             CCCceeEEEEECCCCCeE-ECC-CCCCCCCceECCCCCEEEEEEecCCceEEEEEECCCCceEEcccCCCCCCCCccCC
Confidence            2   26999999877654 333 2223344455  77776655543   35777776443  34444445566666765

>KOG2111|consensus

Probab=99.06  E-value=2.9e-08  Score=95.36  Aligned_cols=225  Identities=12%  Similarity=0.156  Sum_probs=152.8

Q ss_pred             CCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccC--CcEEEEEEcCCCEEEEEECC------CeEEEEe-CCCcEEEE
Q psy7057          44 SPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHE--MAVWGVIQLANGIIVTGCAD------KTIKLHS-EEGEFLKT  114 (557)
Q Consensus        44 ~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~--~~V~~l~~~~~~~l~sgs~d------g~I~vwd-~~~~~~~~  114 (557)
                      +++.+...+++|..+| .+||+.+--+.....+.+.  -.+.-+.|-.+-+.+.|+.+      ..+.||| ....++..
T Consensus        12 s~NQD~ScFava~~~G-friyn~~P~ke~~~r~~~~~G~~~veMLfR~N~laLVGGg~~pky~pNkviIWDD~k~~~i~e   90 (346)
T KOG2111|consen   12 SFNQDHSCFAVATDTG-FRIYNCDPFKESASRQFIDGGFKIVEMLFRSNYLALVGGGSRPKYPPNKVIIWDDLKERCIIE   90 (346)
T ss_pred             EEccCCceEEEEecCc-eEEEecCchhhhhhhccccCchhhhhHhhhhceEEEecCCCCCCCCCceEEEEecccCcEEEE
Confidence            4455566666666554 7999886533322222122  22222333222244445444      5699999 66677777


Q ss_pred             EeCCCCCEEEEEEeCCCeEEEEECCCeEEEEECC-CCeEEEEEeC--CCCcEEEEEE-cCC-EEEE-EeCCCeEEEEECC
Q psy7057         115 LTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDST-TGKCVHTMYG--HPNFIYSVAA-HGD-LITS-GGEDQCVCVYQNK  188 (557)
Q Consensus       115 l~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~-~~~~~~~~~~--h~~~V~~l~~-~~~-~l~s-~s~Dg~I~iwd~~  188 (557)
                      +. ...+|.++.+.++. +++. ....|.||... +.+.++.+..  .+..+.+++. .+. .|+. |-.-|.|+|-|+.
T Consensus        91 l~-f~~~I~~V~l~r~r-iVvv-l~~~I~VytF~~n~k~l~~~et~~NPkGlC~~~~~~~k~~LafPg~k~GqvQi~dL~  167 (346)
T KOG2111|consen   91 LS-FNSEIKAVKLRRDR-IVVV-LENKIYVYTFPDNPKLLHVIETRSNPKGLCSLCPTSNKSLLAFPGFKTGQVQIVDLA  167 (346)
T ss_pred             EE-eccceeeEEEcCCe-EEEE-ecCeEEEEEcCCChhheeeeecccCCCceEeecCCCCceEEEcCCCccceEEEEEhh
Confidence            76 67789999998754 3333 35789999987 5566666543  2445666666 233 4443 4466899999954


Q ss_pred             CC-----ceEeeCCccEEEEEEcCCCc-EEEEEcCCc-EEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeC
Q psy7057         189 AQ-----NSFMIPAMSVWAVAILPNSD-IVTGSSDGI-VRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSD  261 (557)
Q Consensus       189 ~~-----~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~-I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~  261 (557)
                      ..     ..+..|.+.|.|++.+-+|. ++++|..|+ |||||..++..+.......-...+..+.+.++.. .+++.|.
T Consensus       168 ~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp~~s-~LavsSd  246 (346)
T KOG2111|consen  168 STKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFSPNSS-WLAVSSD  246 (346)
T ss_pred             hcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeCCCcc-EEEEEcC
Confidence            33     67888999999999999998 889999998 8999999988876665555667788888877765 4677788


Q ss_pred             CCcEEEEecCCC
Q psy7057         262 DGIVRVFSANPD  273 (557)
Q Consensus       262 DG~IrvW~~~~~  273 (557)
                      -|++.||.+...
T Consensus       247 KgTlHiF~l~~~  258 (346)
T KOG2111|consen  247 KGTLHIFSLRDT  258 (346)
T ss_pred             CCeEEEEEeecC
Confidence            899999998764

>KOG1064|consensus

Probab=99.05  E-value=9.5e-10  Score=124.91  Aligned_cols=202  Identities=13%  Similarity=0.133  Sum_probs=152.2

Q ss_pred             eccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC-----------------CCCCCCCCEEEEEECCCeEEEEECCCC
Q psy7057           8 LYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND-----------------LSPGAKVNTLLSASWDMTAKLWCLESQ   69 (557)
Q Consensus         8 l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~-----------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~   69 (557)
                      ++.|-..|.++.-+|... .+||+.||.|++|....                 +.++..|+.+..+..||.+.+|... .
T Consensus      2204 ~k~~v~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~-p 2282 (2439)
T KOG1064|consen 2204 IKHPVENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCFRTAGNSRVTRSRFNHQGNKFGIVDGDGDLSLWQAS-P 2282 (2439)
T ss_pred             eecccCceeeecCCCCCceEEecCCCceEEEEeccCCCeEEEeeccCcchhhhhhhcccCCceeeeccCCceeecccC-C
Confidence            455567788888778766 88999999999997654                 5677789999999999999999976 5


Q ss_pred             eEEEEEcccCCcEEEEEEcCCCEEEEEE---CCCeEEEEe--CCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEE
Q psy7057          70 QCKLTIRQHEMAVWGVIQLANGIIVTGC---ADKTIKLHS--EEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIR  143 (557)
Q Consensus        70 ~~~~~l~~h~~~V~~l~~~~~~~l~sgs---~dg~I~vwd--~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~  143 (557)
                      ++....+.|........|.. ..+++++   .++.+.+||  ..+..-..-..|.+.++++++.|..+ |++|+.+|.|+
T Consensus      2283 k~~~s~qchnk~~~Df~Fi~-s~~~tag~s~d~~n~~lwDtl~~~~~s~v~~~H~~gaT~l~~~P~~qllisggr~G~v~ 2361 (2439)
T KOG1064|consen 2283 KPYTSWQCHNKALSDFRFIG-SLLATAGRSSDNRNVCLWDTLLPPMNSLVHTCHDGGATVLAYAPKHQLLISGGRKGEVC 2361 (2439)
T ss_pred             cceeccccCCccccceeeee-hhhhccccCCCCCcccchhcccCcccceeeeecCCCceEEEEcCcceEEEecCCcCcEE
Confidence            77888889999999998887 4455544   467899999  33332222278999999999999976 77999999999


Q ss_pred             EEECCCCeEEEEEeCCCCcEEEEEEcCCEEEEEeCCCeEEEEECCCCceEeeC------Ccc----EEEEEEcCCCcEEE
Q psy7057         144 VWDSTTGKCVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQNSFMIP------AMS----VWAVAILPNSDIVT  213 (557)
Q Consensus       144 vwd~~~~~~~~~~~~h~~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~------~~~----v~~v~~~p~g~l~s  213 (557)
                      +||++..+.+++++.       +. ...++++++..|.|+||++.....+...      .+.    -..+-+-+.++|.+
T Consensus      2362 l~D~rqrql~h~~~~-------~~-~~~~f~~~ss~g~ikIw~~s~~~ll~~~p~e~ak~gfFr~~g~Q~~v~~~nrifs 2433 (2439)
T KOG1064|consen 2362 LFDIRQRQLRHTFQA-------LD-TREYFVTGSSEGNIKIWRLSEFGLLHTFPSEHAKQGFFRNIGMQINVGQCNRIFS 2433 (2439)
T ss_pred             EeehHHHHHHHHhhh-------hh-hhheeeccCcccceEEEEccccchhhcCchhhcccchhhhcCceeeeccCceEEE
Confidence            999998888777764       22 4568999999999999997655222211      110    02334445566778


Q ss_pred             EEcCCc
Q psy7057         214 GSSDGI  219 (557)
Q Consensus       214 g~~Dg~  219 (557)
                      |+.||+
T Consensus      2434 Cgad~~ 2439 (2439)
T KOG1064|consen 2434 CGADGT 2439 (2439)
T ss_pred             ecCCCC
Confidence            877763

>KOG4497|consensus

Probab=99.04  E-value=3.7e-09  Score=101.67  Aligned_cols=199  Identities=18%  Similarity=0.186  Sum_probs=138.7

Q ss_pred             EEEcCCCc-EEEEECCCcEEEEcCCC---------------CCCCCCCCEE-EEEECCCeEEEEECCCCeEEEEEcccCC
Q psy7057          18 LSVTPDGC-ILSASRDKSAKLWKPND---------------LSPGAKVNTL-LSASWDMTAKLWCLESQQCKLTIRQHEM   80 (557)
Q Consensus        18 l~~spdg~-l~sgs~Dg~V~iWd~~~---------------~~~~~~~~~l-~sgs~Dg~i~iwd~~~~~~~~~l~~h~~   80 (557)
                      ++|||+|+ ++++++- .+.|-|.++               +.+..+..++ .....++.|.+|++...+--..+.....
T Consensus        14 c~fSp~g~yiAs~~~y-rlviRd~~tlq~~qlf~cldki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ckIdeg~a   92 (447)
T KOG4497|consen   14 CSFSPCGNYIASLSRY-RLVIRDSETLQLHQLFLCLDKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCKIDEGQA   92 (447)
T ss_pred             eeECCCCCeeeeeeee-EEEEeccchhhHHHHHHHHHHhhheeeeccceeeeeeeeccceEEEEEeecceeEEEeccCCC
Confidence            57999999 6666655 888888877               4455555554 4567788999999999888888888899


Q ss_pred             cEEEEEEcCCC--EEEEEECCCeEEEEeCCCcEEEEEeCCCCCEEEEEEeCCCeEEEEECCC----eEEEEECCCCeEEE
Q psy7057          81 AVWGVIQLANG--IIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDA----SIRVWDSTTGKCVH  154 (557)
Q Consensus        81 ~V~~l~~~~~~--~l~sgs~dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg----~I~vwd~~~~~~~~  154 (557)
                      .+.+++|+|+|  .+.+..-+-.|.+|.+..+....+.-.+..+..++|+|+|+|.+-....    .+.+..-.....++
T Consensus        93 gls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~~~~pK~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~~c~~W~ll~  172 (447)
T KOG4497|consen   93 GLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYLLPHPKTNVKGYAFHPDGQFCAILSRRDCKDYVQISSCKAWILLK  172 (447)
T ss_pred             cceeeeECCCcceEeeeecceeEEEEEEeccceeEEecccccCceeEEECCCCceeeeeecccHHHHHHHHhhHHHHHHH
Confidence            99999999999  6777888999999997666555555455678999999999977433221    12222222334445


Q ss_pred             EEeCCCCcEEEEEEcCCEEEEEeCCCeEEEEECCCC-ceEeeC-CccEEEEEEcCCCc-EEEEEcCCcEEEEe
Q psy7057         155 TMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQ-NSFMIP-AMSVWAVAILPNSD-IVTGSSDGIVRVFS  224 (557)
Q Consensus       155 ~~~~h~~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~~-~~~~~~-~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd  224 (557)
                      .+.-.+-..+.+.|.++       +..+.+||.--. +.+..+ ...+..+.|+|.++ ++.|+.|+.+||.+
T Consensus       173 ~f~~dT~DltgieWsPd-------g~~laVwd~~Leykv~aYe~~lG~k~v~wsP~~qflavGsyD~~lrvln  238 (447)
T KOG4497|consen  173 EFKLDTIDLTGIEWSPD-------GNWLAVWDNVLEYKVYAYERGLGLKFVEWSPCNQFLAVGSYDQMLRVLN  238 (447)
T ss_pred             hcCCCcccccCceECCC-------CcEEEEecchhhheeeeeeeccceeEEEeccccceEEeeccchhhhhhc
Confidence            55544555566666222       234556773322 222222 34788999999999 88999999999865

>KOG2321|consensus

Probab=99.02  E-value=2.6e-08  Score=102.24  Aligned_cols=229  Identities=16%  Similarity=0.196  Sum_probs=155.1

Q ss_pred             CCCCCCCCEE-EEEECCCeEEEEECCCCeEEEEEccc--CCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcEEEEEeCC
Q psy7057          43 LSPGAKVNTL-LSASWDMTAKLWCLESQQCKLTIRQH--EMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFLKTLTGH  118 (557)
Q Consensus        43 ~~~~~~~~~l-~sgs~Dg~i~iwd~~~~~~~~~l~~h--~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~~~l~~h  118 (557)
                      +..+++|.++ ++|..--.|++||+.+..  ..+..|  ...|.-.-.+.+- .++.-..|.+|.+...-|.- ..++ -
T Consensus        57 ik~s~DGqY~lAtG~YKP~ikvydlanLS--LKFERhlDae~V~feiLsDD~SK~v~L~~DR~IefHak~G~h-y~~R-I  132 (703)
T KOG2321|consen   57 IKVSPDGQYLLATGTYKPQIKVYDLANLS--LKFERHLDAEVVDFEILSDDYSKSVFLQNDRTIEFHAKYGRH-YRTR-I  132 (703)
T ss_pred             eEecCCCcEEEEecccCCceEEEEcccce--eeeeecccccceeEEEeccchhhheEeecCceeeehhhcCee-eeee-c
Confidence            5667788875 567778899999997644  334444  3344333333333 56666778888776543332 2222 1


Q ss_pred             CCCEEEEEEeC-CCeEEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCeEEEEECCCC---ce
Q psy7057         119 TDCVRGLAVLN-DTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAH--GDLITSGGEDQCVCVYQNKAQ---NS  192 (557)
Q Consensus       119 ~~~V~~l~~~~-~~~lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~~--~~~l~s~s~Dg~I~iwd~~~~---~~  192 (557)
                      ...-+.|+++. ...|++++....|.-+++..|..+..|....+.++++..+  ..+|++|+.+|.|.+||.+..   ..
T Consensus       133 P~~GRDm~y~~~scDly~~gsg~evYRlNLEqGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksrv~~  212 (703)
T KOG2321|consen  133 PKFGRDMKYHKPSCDLYLVGSGSEVYRLNLEQGRFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDPRDKSRVGT  212 (703)
T ss_pred             CcCCccccccCCCccEEEeecCcceEEEEccccccccccccccccceeeeecCccceEEecccCceEEEecchhhhhhee
Confidence            22335566653 3447766666789889999999999888888999999984  347888888999999996543   22


Q ss_pred             Eee------CC-----ccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEe
Q psy7057         193 FMI------PA-----MSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVS  260 (557)
Q Consensus       193 ~~~------~~-----~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s  260 (557)
                      +..      +.     ..|+++.|+.+|- +++|.++|.+.|||++..++.... -....-++..+.+.+.+....+...
T Consensus       213 l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~k-dh~~e~pi~~l~~~~~~~q~~v~S~  291 (703)
T KOG2321|consen  213 LDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVK-DHGYELPIKKLDWQDTDQQNKVVSM  291 (703)
T ss_pred             eecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeec-ccCCccceeeecccccCCCceEEec
Confidence            211      22     2499999999887 999999999999999987765333 2344556677777665443345555


Q ss_pred             CCCcEEEEecCCChhh
Q psy7057         261 DDGIVRVFSANPDRQA  276 (557)
Q Consensus       261 ~DG~IrvW~~~~~~~~  276 (557)
                      .-..++||+-..++..
T Consensus       292 Dk~~~kiWd~~~Gk~~  307 (703)
T KOG2321|consen  292 DKRILKIWDECTGKPM  307 (703)
T ss_pred             chHHhhhcccccCCce
Confidence            6678999998877554

>KOG2139|consensus

Probab=99.01  E-value=1.3e-08  Score=99.18  Aligned_cols=179  Identities=17%  Similarity=0.254  Sum_probs=127.9

Q ss_pred             CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcc-cCCcEEEEEEcCCC--EEEEEECCCeEEEEeCC-----CcEEE-
Q psy7057          43 LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQ-HEMAVWGVIQLANG--IIVTGCADKTIKLHSEE-----GEFLK-  113 (557)
Q Consensus        43 ~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~-h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~~-----~~~~~-  113 (557)
                      +++++.-..++++..|-.|++|+-.. ++...++. ....|+|++|-|.+  .|+.|+.. -|++|..+     +..++ 
T Consensus       104 ~aWhqH~~~fava~nddvVriy~kss-t~pt~Lks~sQrnvtclawRPlsaselavgCr~-gIciW~~s~tln~~r~~~~  181 (445)
T KOG2139|consen  104 VAWHQHIIAFAVATNDDVVRIYDKSS-TCPTKLKSVSQRNVTCLAWRPLSASELAVGCRA-GICIWSDSRTLNANRNIRM  181 (445)
T ss_pred             EeechhhhhhhhhccCcEEEEeccCC-CCCceecchhhcceeEEEeccCCcceeeeeecc-eeEEEEcCccccccccccc
Confidence            67777777789999999999999666 55555543 35789999999966  67777764 57889722     11111 


Q ss_pred             ---------EEeCCCCCEEEEEEeCCCe-EEEEE-CCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCC
Q psy7057         114 ---------TLTGHTDCVRGLAVLNDTD-FVSCS-NDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQ  180 (557)
Q Consensus       114 ---------~l~~h~~~V~~l~~~~~~~-lvs~s-~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg  180 (557)
                               .-.+| ..|++|.|.+++. ++++| .|..|+|||..++..+.-...-.+.+.-+.|  ++++|++++-|+
T Consensus       182 ~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~lfaAt~da  260 (445)
T KOG2139|consen  182 MSTHHLQVLQDPGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVLFAATCDA  260 (445)
T ss_pred             ccccchhheeCCCC-ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccCCCceeeEEEcCCCCEEEEecccc
Confidence                     12244 6799999999976 66665 4678999999988766554344566777777  888999999999


Q ss_pred             eEEEEECCCC---ceEeeCCccEEEEEEcCCCc--EEEEEcCCcEEEEecC
Q psy7057         181 CVCVYQNKAQ---NSFMIPAMSVWAVAILPNSD--IVTGSSDGIVRVFSAN  226 (557)
Q Consensus       181 ~I~iwd~~~~---~~~~~~~~~v~~v~~~p~g~--l~sg~~Dg~I~iwd~~  226 (557)
                      ..++|.....   .......+.|...+|+|+|+  +++++..  -++|.+.
T Consensus       261 vfrlw~e~q~wt~erw~lgsgrvqtacWspcGsfLLf~~sgs--p~lysl~  309 (445)
T KOG2139|consen  261 VFRLWQENQSWTKERWILGSGRVQTACWSPCGSFLLFACSGS--PRLYSLT  309 (445)
T ss_pred             eeeeehhcccceecceeccCCceeeeeecCCCCEEEEEEcCC--ceEEEEe
Confidence            9999964332   33344455899999999999  3444444  4455543

>PRK02889 tolB translocation protein TolB; Provisional

Probab=99.00  E-value=2.7e-08  Score=105.61  Aligned_cols=200  Identities=13%  Similarity=0.062  Sum_probs=124.7

Q ss_pred             EEeccCcccEEEEEEcCCCc-EEEEECC---CcEEEEcCCC---------------CCCCCCCCEEE-EEECCCeEEEEE
Q psy7057           6 TALYGHSMDVRSLSVTPDGC-ILSASRD---KSAKLWKPND---------------LSPGAKVNTLL-SASWDMTAKLWC   65 (557)
Q Consensus         6 ~~l~gH~~~V~~l~~spdg~-l~sgs~D---g~V~iWd~~~---------------~~~~~~~~~l~-sgs~Dg~i~iwd   65 (557)
                      +.+..|...+.+.+|+|||+ |+..+.+   ..|.+||+.+               ..++|+++.|+ +.+.++...||.
T Consensus       189 ~~l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~  268 (427)
T PRK02889        189 QSALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRVVANFKGSNSAPAWSPDGRTLAVALSRDGNSQIYT  268 (427)
T ss_pred             eEeccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEEeecCCCCccceEECCCCCEEEEEEccCCCceEEE
Confidence            34566788899999999998 7665542   4599999865               46788898876 567788777765


Q ss_pred             C--CCCeEEEEEcccCCcEEEEEEcCCC-EEEEEE-CCCeEEEEe--CCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEEC
Q psy7057          66 L--ESQQCKLTIRQHEMAVWGVIQLANG-IIVTGC-ADKTIKLHS--EEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSN  138 (557)
Q Consensus        66 ~--~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs-~dg~I~vwd--~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~  138 (557)
                      +  .++. ...+..+........|+|+| .|+..+ .++...+|.  ..+.....+..+........|+|+|+ ++..+.
T Consensus       269 ~d~~~~~-~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~~lt~~g~~~~~~~~SpDG~~Ia~~s~  347 (427)
T PRK02889        269 VNADGSG-LRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQRVTFTGSYNTSPRISPDGKLLAYISR  347 (427)
T ss_pred             EECCCCC-cEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceEEEecCCCCcCceEECCCCCEEEEEEc
Confidence            4  4433 45555565566778899999 555444 456666665  34433333332333345678999987 444444


Q ss_pred             CC---eEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCC---eEEEEECCCC--ceEeeCCccEEEEEEcCC
Q psy7057         139 DA---SIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQ---CVCVYQNKAQ--NSFMIPAMSVWAVAILPN  208 (557)
Q Consensus       139 Dg---~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg---~I~iwd~~~~--~~~~~~~~~v~~v~~~p~  208 (557)
                      ++   .|.+||+.+++... +... .......|  +++.|+.++.++   .+.+.+....  ..+..+...+...+|+|-
T Consensus       348 ~~g~~~I~v~d~~~g~~~~-lt~~-~~~~~p~~spdg~~l~~~~~~~g~~~l~~~~~~g~~~~~l~~~~g~~~~p~wsp~  425 (427)
T PRK02889        348 VGGAFKLYVQDLATGQVTA-LTDT-TRDESPSFAPNGRYILYATQQGGRSVLAAVSSDGRIKQRLSVQGGDVREPSWGPF  425 (427)
T ss_pred             cCCcEEEEEEECCCCCeEE-ccCC-CCccCceECCCCCEEEEEEecCCCEEEEEEECCCCceEEeecCCCCCCCCccCCC
Confidence            43   69999998876543 3222 22345566  777766665443   2444444322  344445556666677663

>PRK05137 tolB translocation protein TolB; Provisional

Probab=98.99  E-value=2.3e-07  Score=98.94  Aligned_cols=168  Identities=13%  Similarity=0.017  Sum_probs=116.6

Q ss_pred             eEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEEC---CCeEEEEeCCCcEEEEEeCCCCCEEEEEEeCCCe-EE
Q psy7057          60 TAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCA---DKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTD-FV  134 (557)
Q Consensus        60 ~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~---dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~~~-lv  134 (557)
                      .|.++|... .....+..|...+.+..|+|+| .|+..+.   +..|.+||..+.....+..+...+.+..|+|+|. ++
T Consensus       183 ~l~~~d~dg-~~~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~~l~~~~g~~~~~~~SPDG~~la  261 (435)
T PRK05137        183 RLAIMDQDG-ANVRYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRELVGNFPGMTFAPRFSPDGRKVV  261 (435)
T ss_pred             EEEEECCCC-CCcEEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEEEeecCCCcccCcEECCCCCEEE
Confidence            788888754 4445666788899999999999 6666553   4679999976555556666777788899999986 44


Q ss_pred             -EEECCCe--EEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeC-CC--eEEEEECCCC--ceEeeCCccEEEEE
Q psy7057         135 -SCSNDAS--IRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGE-DQ--CVCVYQNKAQ--NSFMIPAMSVWAVA  204 (557)
Q Consensus       135 -s~s~Dg~--I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~-Dg--~I~iwd~~~~--~~~~~~~~~v~~v~  204 (557)
                       +.+.++.  |.+||+.+++. ..+..+........|  +++.|+..+. ++  .|+++|....  +.+......+....
T Consensus       262 ~~~~~~g~~~Iy~~d~~~~~~-~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~~~lt~~~~~~~~~~  340 (435)
T PRK05137        262 MSLSQGGNTDIYTMDLRSGTT-TRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNPRRISFGGGRYSTPV  340 (435)
T ss_pred             EEEecCCCceEEEEECCCCce-EEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCeEEeecCCCcccCeE
Confidence             6666655  77779877765 445556665666677  7777776653 33  6788886544  44544445567789


Q ss_pred             EcCCCc-EEEEEcC---CcEEEEecCCCC
Q psy7057         205 ILPNSD-IVTGSSD---GIVRVFSANPDR  229 (557)
Q Consensus       205 ~~p~g~-l~sg~~D---g~I~iwd~~~~~  229 (557)
                      |+|+|+ ++..+.+   ..|.+|+.....
T Consensus       341 ~SpdG~~ia~~~~~~~~~~i~~~d~~~~~  369 (435)
T PRK05137        341 WSPRGDLIAFTKQGGGQFSIGVMKPDGSG  369 (435)
T ss_pred             ECCCCCEEEEEEcCCCceEEEEEECCCCc
Confidence            999998 5554432   357788875543

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=98.98  E-value=4.4e-08  Score=92.17  Aligned_cols=121  Identities=12%  Similarity=0.175  Sum_probs=87.6

Q ss_pred             EeCCCcEEEEEeC-CCCCEEEEEEeCCCe-EE--EEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeC
Q psy7057         105 HSEEGEFLKTLTG-HTDCVRGLAVLNDTD-FV--SCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGE  178 (557)
Q Consensus       105 wd~~~~~~~~l~~-h~~~V~~l~~~~~~~-lv--s~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~  178 (557)
                      .+..+.....+.- ..++|.+++|+|++. |+  .|..++.|.+||++ ++.+..+.  ...+..+.|  +|++|++++.
T Consensus        44 ~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~lyd~~-~~~i~~~~--~~~~n~i~wsP~G~~l~~~g~  120 (194)
T PF08662_consen   44 LNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTLYDVK-GKKIFSFG--TQPRNTISWSPDGRFLVLAGF  120 (194)
T ss_pred             EecCCCccceeeccCCCceEEEEECcCCCEEEEEEccCCcccEEEcCc-ccEeEeec--CCCceEEEECCCCCEEEEEEc
Confidence            3344444554443 345799999999976 54  45567899999986 67777764  456678888  7788888874


Q ss_pred             ---CCeEEEEECCCCceEee-CCccEEEEEEcCCCc-EEEEEc------CCcEEEEecCCC
Q psy7057         179 ---DQCVCVYQNKAQNSFMI-PAMSVWAVAILPNSD-IVTGSS------DGIVRVFSANPD  228 (557)
Q Consensus       179 ---Dg~I~iwd~~~~~~~~~-~~~~v~~v~~~p~g~-l~sg~~------Dg~I~iwd~~~~  228 (557)
                         .|.|.+||.++...+.. ....+..++|+|+|+ ++++..      |+.++||+....
T Consensus       121 ~n~~G~l~~wd~~~~~~i~~~~~~~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~G~  181 (194)
T PF08662_consen  121 GNLNGDLEFWDVRKKKKISTFEHSDATDVEWSPDGRYLATATTSPRLRVDNGFKIWSFQGR  181 (194)
T ss_pred             cCCCcEEEEEECCCCEEeeccccCcEEEEEEcCCCCEEEEEEeccceeccccEEEEEecCe
Confidence               36799999987744433 334678999999999 666553      788999998754

>KOG0280|consensus

Probab=98.97  E-value=7.2e-08  Score=91.79  Aligned_cols=219  Identities=13%  Similarity=0.117  Sum_probs=140.4

Q ss_pred             EEEEEECCCeEEEEECCCCeEEEEEcccC------CcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCc--EEEEEeCCCC
Q psy7057          51 TLLSASWDMTAKLWCLESQQCKLTIRQHE------MAVWGVIQLANG-IIVTGCADKTIKLHS-EEGE--FLKTLTGHTD  120 (557)
Q Consensus        51 ~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~------~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~--~~~~l~~h~~  120 (557)
                      .++-+-.+|.|.++..........|++-.      ..-.++.|++.+ .++++-.+|.+.+-+ ....  .++..+.|.-
T Consensus        87 ~l~~a~a~G~i~~~r~~~~~ss~~L~~ls~~ki~~~~~lslD~~~~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He~  166 (339)
T KOG0280|consen   87 NLLDAHARGQIQLYRNDEDESSVHLRGLSSKKISVVEALSLDISTSGTKIFVSDSRGSISGVYETEMVLEKVQTWKVHEF  166 (339)
T ss_pred             eeeeccccceEEEEeeccceeeeeecccchhhhhheeeeEEEeeccCceEEEEcCCCcEEEEecceeeeeecccccccce
Confidence            34445556777777655444444444321      123466777777 788888899988555 3333  3447889999


Q ss_pred             CEEEEEEeCC--CeEEEEECCCeEEEEECC-CCeEEEE-EeCCCCcEEEEEE---cCCEEEEEeCCCeEEEEECCCC-ce
Q psy7057         121 CVRGLAVLND--TDFVSCSNDASIRVWDST-TGKCVHT-MYGHPNFIYSVAA---HGDLITSGGEDQCVCVYQNKAQ-NS  192 (557)
Q Consensus       121 ~V~~l~~~~~--~~lvs~s~Dg~I~vwd~~-~~~~~~~-~~~h~~~V~~l~~---~~~~l~s~s~Dg~I~iwd~~~~-~~  192 (557)
                      ..+...|+..  +.+.+|+.|+.+..||+| .++.+.. .+-|...|.+|..   .+.++++|+.|.+|++||++.. +.
T Consensus       167 E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kP  246 (339)
T KOG0280|consen  167 EAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKP  246 (339)
T ss_pred             eeeeeecccCCCceEEecCCCceEEEEEecCCcceeeecceeeecceEEEecCCCCCceEEEeccccceeeeehhcccCc
Confidence            9999999754  335699999999999999 3444444 5568999999988   3459999999999999998855 33


Q ss_pred             Ee--eCCccEEEEEEcCCCc--EEEEEcCCcEEEEecCCCCcc---hhHHHhcccceeEEEeccCCCceeEEEEe-CCCc
Q psy7057         193 FM--IPAMSVWAVAILPNSD--IVTGSSDGIVRVFSANPDRQA---EDAVQAQYAEEVKKLKSANEQEIGGVKVS-DDGI  264 (557)
Q Consensus       193 ~~--~~~~~v~~v~~~p~g~--l~sg~~Dg~I~iwd~~~~~~~---~~~~~~~~~~~v~~l~~~~~~~~~~vs~s-~DG~  264 (557)
                      +.  ...+.||.+..+|.-.  ++.++.-+-.+|-+.+.....   .......|..-...-.+... ...++||| .|..
T Consensus       247 l~~~~v~GGVWRi~~~p~~~~~lL~~CMh~G~ki~~~~~~~~e~~~~~~s~~~hdSl~YG~DWd~~-~~~lATCsFYDk~  325 (339)
T KOG0280|consen  247 LFKAKVGGGVWRIKHHPEIFHRLLAACMHNGAKILDSSDKVLEFQIVLPSDKIHDSLCYGGDWDSK-DSFLATCSFYDKK  325 (339)
T ss_pred             cccCccccceEEEEecchhhhHHHHHHHhcCceEEEecccccchheeeeccccccceeeccccccc-cceeeeeeccccc
Confidence            32  2346899999999754  556666655777776654332   11222222211211222111 22356655 6777


Q ss_pred             EE-EEec
Q psy7057         265 VR-VFSA  270 (557)
Q Consensus       265 Ir-vW~~  270 (557)
                      +| +|-.
T Consensus       326 ~~~~Wl~  332 (339)
T KOG0280|consen  326 IRQLWLH  332 (339)
T ss_pred             eeeeeee
Confidence            66 7743

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=98.96  E-value=5.1e-08  Score=91.74  Aligned_cols=114  Identities=17%  Similarity=0.211  Sum_probs=85.8

Q ss_pred             EEEEEcc-cCCcEEEEEEcCCC-E--EEEEECCCeEEEEeCCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEEC---CCeE
Q psy7057          71 CKLTIRQ-HEMAVWGVIQLANG-I--IVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSN---DASI  142 (557)
Q Consensus        71 ~~~~l~~-h~~~V~~l~~~~~~-~--l~sgs~dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~---Dg~I  142 (557)
                      ....+.- ...+|.+++|+|++ .  ++.|..++.|.+||.+++.+..+.  ...+..+.|+|+|+ +++++.   .|.|
T Consensus        50 ~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~lyd~~~~~i~~~~--~~~~n~i~wsP~G~~l~~~g~~n~~G~l  127 (194)
T PF08662_consen   50 PVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTLYDVKGKKIFSFG--TQPRNTISWSPDGRFLVLAGFGNLNGDL  127 (194)
T ss_pred             ccceeeccCCCceEEEEECcCCCEEEEEEccCCcccEEEcCcccEeEeec--CCCceEEEECCCCCEEEEEEccCCCcEE
Confidence            3444433 34579999999988 4  344556789999998888877774  46778999999988 445553   4679


Q ss_pred             EEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeC------CCeEEEEECC
Q psy7057         143 RVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGE------DQCVCVYQNK  188 (557)
Q Consensus       143 ~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~------Dg~I~iwd~~  188 (557)
                      .+||+++.+.+.++. |. .+..++|  +|++|++++.      |..++||+..
T Consensus       128 ~~wd~~~~~~i~~~~-~~-~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~  179 (194)
T PF08662_consen  128 EFWDVRKKKKISTFE-HS-DATDVEWSPDGRYLATATTSPRLRVDNGFKIWSFQ  179 (194)
T ss_pred             EEEECCCCEEeeccc-cC-cEEEEEEcCCCCEEEEEEeccceeccccEEEEEec
Confidence            999999888887765 33 4678888  7888888764      6788999854

>KOG1064|consensus

Probab=98.95  E-value=9.7e-09  Score=117.00  Aligned_cols=184  Identities=14%  Similarity=0.227  Sum_probs=143.2

Q ss_pred             cccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEe-CCCCCEEEEEEeCCC-eEEEEECCCeEEEEECCCCe
Q psy7057          76 RQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLT-GHTDCVRGLAVLNDT-DFVSCSNDASIRVWDSTTGK  151 (557)
Q Consensus        76 ~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~-~h~~~V~~l~~~~~~-~lvs~s~Dg~I~vwd~~~~~  151 (557)
                      +.+-..|.++.-+|.. ..+||+.||.+++|. ..+..+..++ .-...|+.+.|+.+| .+..+..||.+.+|.+. .+
T Consensus      2205 k~~v~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~-pk 2283 (2439)
T KOG1064|consen 2205 KHPVENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCFRTAGNSRVTRSRFNHQGNKFGIVDGDGDLSLWQAS-PK 2283 (2439)
T ss_pred             ecccCceeeecCCCCCceEEecCCCceEEEEeccCCCeEEEeeccCcchhhhhhhcccCCceeeeccCCceeecccC-Cc
Confidence            3455678888878866 899999999999997 4555555544 223778888888775 48889999999999975 77


Q ss_pred             EEEEEeCCCCcEEEEEEcCCEEEEEe---CCCeEEEEECCCC----ceEeeCCccEEEEEEcCCCc-EEEEEcCCcEEEE
Q psy7057         152 CVHTMYGHPNFIYSVAAHGDLITSGG---EDQCVCVYQNKAQ----NSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVF  223 (557)
Q Consensus       152 ~~~~~~~h~~~V~~l~~~~~~l~s~s---~Dg~I~iwd~~~~----~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iw  223 (557)
                      +....+.|......+.|-+..+++++   .++.+.+||.-..    ..-..|...++++++.|..+ |++||.+|.|++|
T Consensus      2284 ~~~s~qchnk~~~Df~Fi~s~~~tag~s~d~~n~~lwDtl~~~~~s~v~~~H~~gaT~l~~~P~~qllisggr~G~v~l~ 2363 (2439)
T KOG1064|consen 2284 PYTSWQCHNKALSDFRFIGSLLATAGRSSDNRNVCLWDTLLPPMNSLVHTCHDGGATVLAYAPKHQLLISGGRKGEVCLF 2363 (2439)
T ss_pred             ceeccccCCccccceeeeehhhhccccCCCCCcccchhcccCcccceeeeecCCCceEEEEcCcceEEEecCCcCcEEEe
Confidence            88888889999999999777777765   5689999993222    23367889999999999998 8899999999999


Q ss_pred             ecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCC
Q psy7057         224 SANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPD  273 (557)
Q Consensus       224 d~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~  273 (557)
                      |++..++......            .. .+..+++++..|.|+||++++-
T Consensus      2364 D~rqrql~h~~~~------------~~-~~~~f~~~ss~g~ikIw~~s~~ 2400 (2439)
T KOG1064|consen 2364 DIRQRQLRHTFQA------------LD-TREYFVTGSSEGNIKIWRLSEF 2400 (2439)
T ss_pred             ehHHHHHHHHhhh------------hh-hhheeeccCcccceEEEEcccc
Confidence            9986554433222            11 3446899999999999998865

>PRK04922 tolB translocation protein TolB; Provisional

Probab=98.95  E-value=1.1e-07  Score=101.24  Aligned_cols=171  Identities=10%  Similarity=0.035  Sum_probs=114.5

Q ss_pred             CeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEEC---CCeEEEEeCCCcEEEEEeCCCCCEEEEEEeCCCe-E
Q psy7057          59 MTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCA---DKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTD-F  133 (557)
Q Consensus        59 g~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~---dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~~~-l  133 (557)
                      .+|.+||... .....+..+...+.+.+|+|++ .|+..+.   +..|.+||..+.....+..+.....+..|+|++. +
T Consensus       184 ~~l~i~D~~g-~~~~~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~l~~~~g~~~~~~~SpDG~~l  262 (433)
T PRK04922        184 YALQVADSDG-YNPQTILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQRELVASFRGINGAPSFSPDGRRL  262 (433)
T ss_pred             EEEEEECCCC-CCceEeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEEeccCCCCccCceECCCCCEE
Confidence            3688999854 4445566677889999999999 6776663   3469999965544445555555566889999986 4


Q ss_pred             E-EEECCC--eEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeC-CCe--EEEEECCCC--ceEeeCCccEEEE
Q psy7057         134 V-SCSNDA--SIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGE-DQC--VCVYQNKAQ--NSFMIPAMSVWAV  203 (557)
Q Consensus       134 v-s~s~Dg--~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~-Dg~--I~iwd~~~~--~~~~~~~~~v~~v  203 (557)
                      + +.+.++  .|.+||+.+++.. .+..+.......+|  +++.|+.++. ++.  |+++++...  +.+.........+
T Consensus       263 ~~~~s~~g~~~Iy~~d~~~g~~~-~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~~lt~~g~~~~~~  341 (433)
T PRK04922        263 ALTLSRDGNPEIYVMDLGSRQLT-RLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAERLTFQGNYNARA  341 (433)
T ss_pred             EEEEeCCCCceEEEEECCCCCeE-ECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeEEeecCCCCccCE
Confidence            4 556555  5999999887653 45555555556677  7777776653 444  666676544  3444333445578


Q ss_pred             EEcCCCc-EEEEEcC-C--cEEEEecCCCCcc
Q psy7057         204 AILPNSD-IVTGSSD-G--IVRVFSANPDRQA  231 (557)
Q Consensus       204 ~~~p~g~-l~sg~~D-g--~I~iwd~~~~~~~  231 (557)
                      +|+|+|+ ++..+.+ +  .|.+|++.++...
T Consensus       342 ~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~  373 (433)
T PRK04922        342 SVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVR  373 (433)
T ss_pred             EECCCCCEEEEEECCCCceeEEEEECCCCCeE
Confidence            9999998 5544433 2  5899998776543

>PRK03629 tolB translocation protein TolB; Provisional

Probab=98.93  E-value=1.4e-07  Score=100.18  Aligned_cols=184  Identities=9%  Similarity=0.049  Sum_probs=117.4

Q ss_pred             CCCCCCCCEEEEEEC---CCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEE-EEECCC--eEEEEeCCCcEEEEE
Q psy7057          43 LSPGAKVNTLLSASW---DMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIV-TGCADK--TIKLHSEEGEFLKTL  115 (557)
Q Consensus        43 ~~~~~~~~~l~sgs~---Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~-sgs~dg--~I~vwd~~~~~~~~l  115 (557)
                      ..++|+++.|+..+.   +..+.+|++.+++... +......+....|+|+| .|+ +.+.++  .|.+||..+.....+
T Consensus       204 p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~-l~~~~~~~~~~~~SPDG~~La~~~~~~g~~~I~~~d~~tg~~~~l  282 (429)
T PRK03629        204 PAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQ-VASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQV  282 (429)
T ss_pred             eEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEE-ccCCCCCcCCeEECCCCCEEEEEEcCCCCcEEEEEECCCCCEEEc
Confidence            677889998887653   3579999998875432 22233334568999999 454 344455  488889765555666


Q ss_pred             eCCCCCEEEEEEeCCCe-EEEEEC-CCe--EEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCC---CeEEEEE
Q psy7057         116 TGHTDCVRGLAVLNDTD-FVSCSN-DAS--IRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGED---QCVCVYQ  186 (557)
Q Consensus       116 ~~h~~~V~~l~~~~~~~-lvs~s~-Dg~--I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~D---g~I~iwd  186 (557)
                      ..+...+....|+|+++ |+.++. ++.  |.++|+.+++. ..+..+.....+..+  +|+.|+..+.+   ..|.+||
T Consensus       283 t~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~-~~lt~~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~d  361 (429)
T PRK03629        283 TDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQD  361 (429)
T ss_pred             cCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCe-EEeecCCCCccCEEECCCCCEEEEEEccCCCceEEEEE
Confidence            65666788899999987 555554 344  44556666544 333333344445555  77877765543   3588889


Q ss_pred             CCCC--ceEeeCCccEEEEEEcCCCc-EEEEEcCCc---EEEEecCCCC
Q psy7057         187 NKAQ--NSFMIPAMSVWAVAILPNSD-IVTGSSDGI---VRVFSANPDR  229 (557)
Q Consensus       187 ~~~~--~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~---I~iwd~~~~~  229 (557)
                      +.+.  ..+.. ........|+|||+ ++.++.++.   +++++++...
T Consensus       362 l~~g~~~~Lt~-~~~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~~~G~~  409 (429)
T PRK03629        362 LATGGVQVLTD-TFLDETPSIAPNGTMVIYSSSQGMGSVLNLVSTDGRF  409 (429)
T ss_pred             CCCCCeEEeCC-CCCCCCceECCCCCEEEEEEcCCCceEEEEEECCCCC
Confidence            7655  33332 22345678999999 777776654   6777776543

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=98.87  E-value=1.2e-06  Score=91.49  Aligned_cols=246  Identities=13%  Similarity=0.045  Sum_probs=153.7

Q ss_pred             CCcEEEEECCCcEEEEcCCC--------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEc
Q psy7057          23 DGCILSASRDKSAKLWKPND--------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQL   88 (557)
Q Consensus        23 dg~l~sgs~Dg~V~iWd~~~--------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~   88 (557)
                      +++++.++.++.|.-+|..+              -.+...+..++.++.++.+..+|..+|+.+....... .+.+....
T Consensus        65 ~~~v~v~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~p~v~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~-~~~~~p~v  143 (377)
T TIGR03300        65 GGKVYAADADGTVVALDAETGKRLWRVDLDERLSGGVGADGGLVFVGTEKGEVIALDAEDGKELWRAKLSS-EVLSPPLV  143 (377)
T ss_pred             CCEEEEECCCCeEEEEEccCCcEeeeecCCCCcccceEEcCCEEEEEcCCCEEEEEECCCCcEeeeeccCc-eeecCCEE
Confidence            45688888899998888765              1112246788899999999999999999887665332 22221112


Q ss_pred             CCCEEEEEECCCeEEEEe-CCCcEEEEEeCCCCCE-----EEEEEeCCCeEEEEECCCeEEEEECCCCeEEEEEeCCCC-
Q psy7057          89 ANGIIVTGCADKTIKLHS-EEGEFLKTLTGHTDCV-----RGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPN-  161 (557)
Q Consensus        89 ~~~~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V-----~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~-  161 (557)
                      .++.++.++.++.+..+| .+|+.+..+......+     .+..+. ++.++.++.++.+..+|.++|+.+.+...... 
T Consensus       144 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~~~~~sp~~~-~~~v~~~~~~g~v~ald~~tG~~~W~~~~~~~~  222 (377)
T TIGR03300       144 ANGLVVVRTNDGRLTALDAATGERLWTYSRVTPALTLRGSASPVIA-DGGVLVGFAGGKLVALDLQTGQPLWEQRVALPK  222 (377)
T ss_pred             ECCEEEEECCCCeEEEEEcCCCceeeEEccCCCceeecCCCCCEEE-CCEEEEECCCCEEEEEEccCCCEeeeeccccCC
Confidence            255777888899999999 5777776655332211     111222 35677888899999999999987655431100 


Q ss_pred             ----------cEEEEEEcCCEEEEEeCCCeEEEEECCCCceEeeCC-ccEEEEEEcCCCcEEEEEcCCcEEEEecCCCCc
Q psy7057         162 ----------FIYSVAAHGDLITSGGEDQCVCVYQNKAQNSFMIPA-MSVWAVAILPNSDIVTGSSDGIVRVFSANPDRQ  230 (557)
Q Consensus       162 ----------~V~~l~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~-~~v~~v~~~p~g~l~sg~~Dg~I~iwd~~~~~~  230 (557)
                                ...+....+..+++++.++.++.||..+...+-... ........ .++.+++++.||.|+.+|..+++.
T Consensus       223 g~~~~~~~~~~~~~p~~~~~~vy~~~~~g~l~a~d~~tG~~~W~~~~~~~~~p~~-~~~~vyv~~~~G~l~~~d~~tG~~  301 (377)
T TIGR03300       223 GRTELERLVDVDGDPVVDGGQVYAVSYQGRVAALDLRSGRVLWKRDASSYQGPAV-DDNRLYVTDADGVVVALDRRSGSE  301 (377)
T ss_pred             CCCchhhhhccCCccEEECCEEEEEEcCCEEEEEECCCCcEEEeeccCCccCceE-eCCEEEEECCCCeEEEEECCCCcE
Confidence                      011222356788888999999999987663332211 11112222 245588888999999999987765


Q ss_pred             chhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCChh
Q psy7057         231 AEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQ  275 (557)
Q Consensus       231 ~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~~~  275 (557)
                      .-...  ............  ....+++++.||.|++++..+++.
T Consensus       302 ~W~~~--~~~~~~~ssp~i--~g~~l~~~~~~G~l~~~d~~tG~~  342 (377)
T TIGR03300       302 LWKND--ELKYRQLTAPAV--VGGYLVVGDFEGYLHWLSREDGSF  342 (377)
T ss_pred             EEccc--cccCCccccCEE--ECCEEEEEeCCCEEEEEECCCCCE
Confidence            42111  011111000000  122567889999999999776543

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>PRK02889 tolB translocation protein TolB; Provisional

Probab=98.86  E-value=3.7e-07  Score=96.98  Aligned_cols=170  Identities=9%  Similarity=0.036  Sum_probs=109.8

Q ss_pred             CeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECC---CeEEEEeCCCcEEEEEeCCCCCEEEEEEeCCCe-E
Q psy7057          59 MTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCAD---KTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTD-F  133 (557)
Q Consensus        59 g~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~d---g~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~~~-l  133 (557)
                      ..|.++|.. +.....+..+...+.+.+|+|+| .|+..+.+   ..|.+||..+.....+......+.+..|+|++. +
T Consensus       176 ~~L~~~D~d-G~~~~~l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~l~~~~g~~~~~~~SPDG~~l  254 (427)
T PRK02889        176 YQLQISDAD-GQNAQSALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRVVANFKGSNSAPAWSPDGRTL  254 (427)
T ss_pred             cEEEEECCC-CCCceEeccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEEeecCCCCccceEECCCCCEE
Confidence            357777764 44445566678889999999999 66665532   359999965544444554555677899999986 5


Q ss_pred             E-EEECCCeEEEEE--CCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeC-CCeEEEEE--CCCC--ceEeeCCccEEEE
Q psy7057         134 V-SCSNDASIRVWD--STTGKCVHTMYGHPNFIYSVAA--HGDLITSGGE-DQCVCVYQ--NKAQ--NSFMIPAMSVWAV  203 (557)
Q Consensus       134 v-s~s~Dg~I~vwd--~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~-Dg~I~iwd--~~~~--~~~~~~~~~v~~v  203 (557)
                      + +.+.++...||.  +.++. ...+..+........|  +|+.|+..+. ++...+|.  ....  +.+..........
T Consensus       255 a~~~~~~g~~~Iy~~d~~~~~-~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~~lt~~g~~~~~~  333 (427)
T PRK02889        255 AVALSRDGNSQIYTVNADGSG-LRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQRVTFTGSYNTSP  333 (427)
T ss_pred             EEEEccCCCceEEEEECCCCC-cEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceEEEecCCCCcCce
Confidence            4 567788766665  44443 4555555555556667  7777765554 45666665  3332  3333333344568


Q ss_pred             EEcCCCc-EEEEEcCC---cEEEEecCCCCc
Q psy7057         204 AILPNSD-IVTGSSDG---IVRVFSANPDRQ  230 (557)
Q Consensus       204 ~~~p~g~-l~sg~~Dg---~I~iwd~~~~~~  230 (557)
                      +|+|+|+ ++..+.++   .|++|++.++..
T Consensus       334 ~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~  364 (427)
T PRK02889        334 RISPDGKLLAYISRVGGAFKLYVQDLATGQV  364 (427)
T ss_pred             EECCCCCEEEEEEccCCcEEEEEEECCCCCe
Confidence            8999999 66555443   699999887654

>KOG4497|consensus

Probab=98.86  E-value=2.2e-07  Score=89.71  Aligned_cols=212  Identities=13%  Similarity=0.120  Sum_probs=141.3

Q ss_pred             EeccCcccEEEEEEcCCCc--EEEEECCCcEEEEcCCC---------------CCCCCCCCEEEEEEC------------
Q psy7057           7 ALYGHSMDVRSLSVTPDGC--ILSASRDKSAKLWKPND---------------LSPGAKVNTLLSASW------------   57 (557)
Q Consensus         7 ~l~gH~~~V~~l~~spdg~--l~sgs~Dg~V~iWd~~~---------------~~~~~~~~~l~sgs~------------   57 (557)
                      .+..-.+.+.+++|||||+  |.+..-+-.|.+|.+.+               +++++++++.+.+++            
T Consensus        86 kIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~~~~pK~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~~c  165 (447)
T KOG4497|consen   86 KIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYLLPHPKTNVKGYAFHPDGQFCAILSRRDCKDYVQISSC  165 (447)
T ss_pred             EeccCCCcceeeeECCCcceEeeeecceeEEEEEEeccceeEEecccccCceeEEECCCCceeeeeecccHHHHHHHHhh
Confidence            3445567899999999997  56888999999999887               455666666555443            


Q ss_pred             ------------------------CCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcE
Q psy7057          58 ------------------------DMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEF  111 (557)
Q Consensus        58 ------------------------Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~  111 (557)
                                              +..+.+||---.-.+. .....-.+..+.|+|.+ .|+.|+.|+.+|+.+ .+-++
T Consensus       166 ~~W~ll~~f~~dT~DltgieWsPdg~~laVwd~~Leykv~-aYe~~lG~k~v~wsP~~qflavGsyD~~lrvlnh~tWk~  244 (447)
T KOG4497|consen  166 KAWILLKEFKLDTIDLTGIEWSPDGNWLAVWDNVLEYKVY-AYERGLGLKFVEWSPCNQFLAVGSYDQMLRVLNHFTWKP  244 (447)
T ss_pred             HHHHHHHhcCCCcccccCceECCCCcEEEEecchhhheee-eeeeccceeEEEeccccceEEeeccchhhhhhceeeeee
Confidence                                    1223334311111111 11123567889999966 999999999998854 11000


Q ss_pred             ------------------------------------------------------------EEEEeC------CCCCEEEE
Q psy7057         112 ------------------------------------------------------------LKTLTG------HTDCVRGL  125 (557)
Q Consensus       112 ------------------------------------------------------------~~~l~~------h~~~V~~l  125 (557)
                                                                                  ++.++.      ....+.-+
T Consensus       245 f~eflhl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p~~~~a~~~~~se~~YE~~~~pv~~~~lkp~tD~pnPk~g~g~l  324 (447)
T KOG4497|consen  245 FGEFLHLCSYHDPTLHLLEKETFSIVQLLHHCLSFTPTDLEAHIWEESETIYEQQMTPVKVHKLKPPTDFPNPKCGAGKL  324 (447)
T ss_pred             hhhhccchhccCchhhhhhhhhcchhhhcccccccCCCccccCccccchhhhhhhhcceeeecccCCCCCCCccccccee
Confidence                                                                        001111      12346678


Q ss_pred             EEeCCCeEEEEECCC---eEEEEECCCCeEEEEEeCCCCcEEEEEEcCC--EEEEEeCCCeEEEEECCCCceE--eeCCc
Q psy7057         126 AVLNDTDFVSCSNDA---SIRVWDSTTGKCVHTMYGHPNFIYSVAAHGD--LITSGGEDQCVCVYQNKAQNSF--MIPAM  198 (557)
Q Consensus       126 ~~~~~~~lvs~s~Dg---~I~vwd~~~~~~~~~~~~h~~~V~~l~~~~~--~l~s~s~Dg~I~iwd~~~~~~~--~~~~~  198 (557)
                      +|+++..+++.-+|+   .+-+||++..+....+. ...+|++..|++.  .|+.+.....+++|........  ....-
T Consensus       325 afs~Ds~y~aTrnd~~PnalW~Wdlq~l~l~avLi-Qk~piraf~WdP~~prL~vctg~srLY~W~psg~~~V~vP~~GF  403 (447)
T KOG4497|consen  325 AFSCDSTYAATRNDKYPNALWLWDLQNLKLHAVLI-QKHPIRAFEWDPGRPRLVVCTGKSRLYFWAPSGPRVVGVPKKGF  403 (447)
T ss_pred             eecCCceEEeeecCCCCceEEEEechhhhhhhhhh-hccceeEEEeCCCCceEEEEcCCceEEEEcCCCceEEecCCCCc
Confidence            899998888777774   48899998766544443 5678999999653  6777777778999997666443  33445


Q ss_pred             cEEEEEEcCCCc-EEEEEcCCcE
Q psy7057         199 SVWAVAILPNSD-IVTGSSDGIV  220 (557)
Q Consensus       199 ~v~~v~~~p~g~-l~sg~~Dg~I  220 (557)
                      .|..+.|+-.|. ++..+.|...
T Consensus       404 ~i~~l~W~~~g~~i~l~~kDafc  426 (447)
T KOG4497|consen  404 NIQKLQWLQPGEFIVLCGKDAFC  426 (447)
T ss_pred             eeeeEEecCCCcEEEEEcCCceE
Confidence            789999999998 7778777643

>KOG4547|consensus

Probab=98.84  E-value=9.2e-07  Score=91.70  Aligned_cols=179  Identities=11%  Similarity=0.130  Sum_probs=140.1

Q ss_pred             CCCCEEEEEECCCeEEEEECCCCeEEEEEccc---CCcEEEEEE------cC--------------CC-EEEEEECCCeE
Q psy7057          47 AKVNTLLSASWDMTAKLWCLESQQCKLTIRQH---EMAVWGVIQ------LA--------------NG-IIVTGCADKTI  102 (557)
Q Consensus        47 ~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h---~~~V~~l~~------~~--------------~~-~l~sgs~dg~I  102 (557)
                      +...+++....||.+|+|+...++....+...   ++...+..|      +|              +. .++-|...|.|
T Consensus         3 ~~~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~v   82 (541)
T KOG4547|consen    3 PALDYFALSTGDGRLRIWDTAKNQLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGSV   82 (541)
T ss_pred             chhheEeecCCCCeEEEEEccCceeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCccE
Confidence            34678999999999999999988766655431   223333333      22              22 68889999999


Q ss_pred             EEEe-CCCcEEEEEe--CCCCCEEEEEEeCC-CeEEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEE
Q psy7057         103 KLHS-EEGEFLKTLT--GHTDCVRGLAVLND-TDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSG  176 (557)
Q Consensus       103 ~vwd-~~~~~~~~l~--~h~~~V~~l~~~~~-~~lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~  176 (557)
                      .+++ ..++....+.  .|.+.|.++.++.+ +.|.|++.|+.+..|+......++.+...+..+.++++  ++..++++
T Consensus        83 ~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~~sl~is~D~~~l~~a  162 (541)
T KOG4547|consen   83 LLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPLVSSLCISPDGKILLTA  162 (541)
T ss_pred             EEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCccceEEEcCCCCEEEec
Confidence            9999 5666666665  68999999998877 55889999999999999999999999988888888888  66678777


Q ss_pred             eCCCeEEEEECCCC---ceEeeCCccEEEEEEcCC-----Cc-EE-EEEcCCcEEEEecCC
Q psy7057         177 GEDQCVCVYQNKAQ---NSFMIPAMSVWAVAILPN-----SD-IV-TGSSDGIVRVFSANP  227 (557)
Q Consensus       177 s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p~-----g~-l~-sg~~Dg~I~iwd~~~  227 (557)
                      +  +.|++||+++.   ..+.+|.++|++++|.-+     |. ++ +...+.-+.+|-+..
T Consensus       163 s--~~ik~~~~~~kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v~~  221 (541)
T KOG4547|consen  163 S--RQIKVLDIETKEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVVEK  221 (541)
T ss_pred             c--ceEEEEEccCceEEEEecCCCcceEEEEEEEeccccccceeeeccccccceeEEEEEc
Confidence            6  58999998776   788899999999999876     55 33 455567788887765

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=98.83  E-value=1.4e-06  Score=92.19  Aligned_cols=181  Identities=15%  Similarity=0.100  Sum_probs=118.2

Q ss_pred             CCCCCCCCEEEEEECC---CeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EE-EEEECCC--eEEEEeCCCcEEEEE
Q psy7057          43 LSPGAKVNTLLSASWD---MTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-II-VTGCADK--TIKLHSEEGEFLKTL  115 (557)
Q Consensus        43 ~~~~~~~~~l~sgs~D---g~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l-~sgs~dg--~I~vwd~~~~~~~~l  115 (557)
                      ..++++++.|+.++.+   ..|++|++.+++... +..+...+.+++|+|++ .| ++.+.++  .|.+|+..+.....+
T Consensus       195 p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~-~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~i~~~d~~~~~~~~l  273 (417)
T TIGR02800       195 PAWSPDGQKLAYVSFESGKPEIYVQDLATGQREK-VASFPGMNGAPAFSPDGSKLAVSLSKDGNPDIYVMDLDGKQLTRL  273 (417)
T ss_pred             ccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEE-eecCCCCccceEECCCCCEEEEEECCCCCccEEEEECCCCCEEEC
Confidence            5678889999887754   479999998875543 33455667778999998 44 4555554  488888766656666


Q ss_pred             eCCCCCEEEEEEeCCCe-EEEEEC-CC--eEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCC---eEEEEE
Q psy7057         116 TGHTDCVRGLAVLNDTD-FVSCSN-DA--SIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQ---CVCVYQ  186 (557)
Q Consensus       116 ~~h~~~V~~l~~~~~~~-lvs~s~-Dg--~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg---~I~iwd  186 (557)
                      ..+........|+|++. |+.++. ++  .|.++|+.+++.. .+..+...+..+.+  ++++++.++.++   .|.+||
T Consensus       274 ~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~~-~l~~~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d  352 (417)
T TIGR02800       274 TNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEVR-RLTFRGGYNASPSWSPDGDLIAFVHREGGGFNIAVMD  352 (417)
T ss_pred             CCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCEE-EeecCCCCccCeEECCCCCEEEEEEccCCceEEEEEe
Confidence            66665566778999976 554443 33  5888888776643 34434555556666  677888777765   788888


Q ss_pred             CCCC--ceEeeCCccEEEEEEcCCCc-EEEEEcCC---cEEEEecC
Q psy7057         187 NKAQ--NSFMIPAMSVWAVAILPNSD-IVTGSSDG---IVRVFSAN  226 (557)
Q Consensus       187 ~~~~--~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg---~I~iwd~~  226 (557)
                      +...  +.+.. .......+|+|+++ |+..+.++   .+++.+..
T Consensus       353 ~~~~~~~~l~~-~~~~~~p~~spdg~~l~~~~~~~~~~~l~~~~~~  397 (417)
T TIGR02800       353 LDGGGERVLTD-TGLDESPSFAPNGRMILYATTRGGRGVLGLVSTD  397 (417)
T ss_pred             CCCCCeEEccC-CCCCCCceECCCCCEEEEEEeCCCcEEEEEEECC
Confidence            7654  22222 22344568999998 55555443   34555543

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=98.79  E-value=2.1e-06  Score=89.66  Aligned_cols=238  Identities=13%  Similarity=0.108  Sum_probs=147.8

Q ss_pred             CCcEEEEECCCcEEEEcCCC--------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEE-----
Q psy7057          23 DGCILSASRDKSAKLWKPND--------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVW-----   83 (557)
Q Consensus        23 dg~l~sgs~Dg~V~iWd~~~--------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~-----   83 (557)
                      ++.++.++.++.+..+|..+              ..+.-.++.++.++.++.+..||.++++.+..+......+.     
T Consensus       105 ~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~p~v~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~~~~~  184 (377)
T TIGR03300       105 GGLVFVGTEKGEVIALDAEDGKELWRAKLSSEVLSPPLVANGLVVVRTNDGRLTALDAATGERLWTYSRVTPALTLRGSA  184 (377)
T ss_pred             CCEEEEEcCCCEEEEEECCCCcEeeeeccCceeecCCEEECCEEEEECCCCeEEEEEcCCCceeeEEccCCCceeecCCC
Confidence            34577888899999998765              01111246788888999999999999998877654332211     


Q ss_pred             EEEEcCCCEEEEEECCCeEEEEe-CCCcEEEEEeCC-CC---------CEEEEEEeCCCeEEEEECCCeEEEEECCCCeE
Q psy7057          84 GVIQLANGIIVTGCADKTIKLHS-EEGEFLKTLTGH-TD---------CVRGLAVLNDTDFVSCSNDASIRVWDSTTGKC  152 (557)
Q Consensus        84 ~l~~~~~~~l~sgs~dg~I~vwd-~~~~~~~~l~~h-~~---------~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~~  152 (557)
                      +... .++.++.++.++.+..+| .+|+.+...... ..         .+.+-....++.++.++.++.+..+|..+++.
T Consensus       185 sp~~-~~~~v~~~~~~g~v~ald~~tG~~~W~~~~~~~~g~~~~~~~~~~~~~p~~~~~~vy~~~~~g~l~a~d~~tG~~  263 (377)
T TIGR03300       185 SPVI-ADGGVLVGFAGGKLVALDLQTGQPLWEQRVALPKGRTELERLVDVDGDPVVDGGQVYAVSYQGRVAALDLRSGRV  263 (377)
T ss_pred             CCEE-ECCEEEEECCCCEEEEEEccCCCEeeeeccccCCCCCchhhhhccCCccEEECCEEEEEEcCCEEEEEECCCCcE
Confidence            1111 145778888899999999 467665443211 00         01111111246677888999999999999988


Q ss_pred             EEEEeCCCCcEEEEEEcCCEEEEEeCCCeEEEEECCCCceEeeC---Cc-cEEEEEEcCCCcEEEEEcCCcEEEEecCCC
Q psy7057         153 VHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQNSFMIP---AM-SVWAVAILPNSDIVTGSSDGIVRVFSANPD  228 (557)
Q Consensus       153 ~~~~~~h~~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~---~~-~v~~v~~~p~g~l~sg~~Dg~I~iwd~~~~  228 (557)
                      +.....  .........+..++.++.+|.++.+|..+...+-..   .. ...+... -++.+++++.+|.|++++..++
T Consensus       264 ~W~~~~--~~~~~p~~~~~~vyv~~~~G~l~~~d~~tG~~~W~~~~~~~~~~ssp~i-~g~~l~~~~~~G~l~~~d~~tG  340 (377)
T TIGR03300       264 LWKRDA--SSYQGPAVDDNRLYVTDADGVVVALDRRSGSELWKNDELKYRQLTAPAV-VGGYLVVGDFEGYLHWLSREDG  340 (377)
T ss_pred             EEeecc--CCccCceEeCCEEEEECCCCeEEEEECCCCcEEEccccccCCccccCEE-ECCEEEEEeCCCEEEEEECCCC
Confidence            776552  122334456778888899999999998766333221   11 1122222 2345889999999999999887


Q ss_pred             CcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEE
Q psy7057         229 RQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVF  268 (557)
Q Consensus       229 ~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW  268 (557)
                      +.........  ..+........  ..++.++.||.|..|
T Consensus       341 ~~~~~~~~~~--~~~~~sp~~~~--~~l~v~~~dG~l~~~  376 (377)
T TIGR03300       341 SFVARLKTDG--SGIASPPVVVG--DGLLVQTRDGDLYAF  376 (377)
T ss_pred             CEEEEEEcCC--CccccCCEEEC--CEEEEEeCCceEEEe
Confidence            6653222111  01111111111  246788999998776

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>KOG4190|consensus

Probab=98.79  E-value=1.6e-08  Score=102.97  Aligned_cols=256  Identities=19%  Similarity=0.269  Sum_probs=160.6

Q ss_pred             EEeccCcccEEEEEEcCCC-cEEEEECCCcEEEEcCCC-----------------------CCCCCCCCEEEEEECCCeE
Q psy7057           6 TALYGHSMDVRSLSVTPDG-CILSASRDKSAKLWKPND-----------------------LSPGAKVNTLLSASWDMTA   61 (557)
Q Consensus         6 ~~l~gH~~~V~~l~~spdg-~l~sgs~Dg~V~iWd~~~-----------------------~~~~~~~~~l~sgs~Dg~i   61 (557)
                      +.+.||+..|+.++--.+. .++++|.|.+|++|.+..                       +.+-.+..  ..++.|+.|
T Consensus       729 ~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr--~i~ScD~gi  806 (1034)
T KOG4190|consen  729 CNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLR--SIASCDGGI  806 (1034)
T ss_pred             ecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccc--eeeeccCcc
Confidence            5678999999998765544 499999999999999875                       11111222  345678999


Q ss_pred             EEEECCCCeEEEEEc--ccCCcEEEEEEcC--CC-EEEE-EECCCeEEEEe-CCCcEEEEEe-----CCCCCEEEEEEeC
Q psy7057          62 KLWCLESQQCKLTIR--QHEMAVWGVIQLA--NG-IIVT-GCADKTIKLHS-EEGEFLKTLT-----GHTDCVRGLAVLN  129 (557)
Q Consensus        62 ~iwd~~~~~~~~~l~--~h~~~V~~l~~~~--~~-~l~s-gs~dg~I~vwd-~~~~~~~~l~-----~h~~~V~~l~~~~  129 (557)
                      ++||.--++++....  ...+.+..+...+  +. .++. ++...+++++| ...+-...++     +...-++++++.+
T Consensus       807 HlWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R~iaVa~  886 (1034)
T KOG4190|consen  807 HLWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTRAIAVAD  886 (1034)
T ss_pred             eeecccccchhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEeccCCCCchheeEEEecc
Confidence            999987776655332  1223333333334  23 4444 47889999999 4444433332     3446689999998


Q ss_pred             CCe-EEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE-cCCEEEEEeCCCeEEE-EECCCC-c--eEeeCCccEEEE
Q psy7057         130 DTD-FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA-HGDLITSGGEDQCVCV-YQNKAQ-N--SFMIPAMSVWAV  203 (557)
Q Consensus       130 ~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~-~~~~l~s~s~Dg~I~i-wd~~~~-~--~~~~~~~~v~~v  203 (557)
                      .|. ++.+-..|+|.+.|.++|+.+..+..-......++. ....|+....|.++.+ |-.-.. .  +...+..+.   
T Consensus       887 ~GN~lAa~LSnGci~~LDaR~G~vINswrpmecdllqlaapsdq~L~~saldHslaVnWhaldgimh~q~kpppepa---  963 (1034)
T KOG4190|consen  887 KGNKLAAALSNGCIAILDARNGKVINSWRPMECDLLQLAAPSDQALAQSALDHSLAVNWHALDGIMHLQDKPPPEPA---  963 (1034)
T ss_pred             CcchhhHHhcCCcEEEEecCCCceeccCCcccchhhhhcCchhHHHHhhcccceeEeeehhcCCeeeeccCCCCcch---
Confidence            876 778888899999999999998887765554555554 5557788888888888 863322 1  111111111   


Q ss_pred             EEc-CCCc-EEEEEcCCcEEEEecCCCCcc----hhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEE
Q psy7057         204 AIL-PNSD-IVTGSSDGIVRVFSANPDRQA----EDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRV  267 (557)
Q Consensus       204 ~~~-p~g~-l~sg~~Dg~I~iwd~~~~~~~----~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~Irv  267 (557)
                      -|. .-|. ++++.....+++|.-......    .......+.+..+.+...+-+. ..+.|...|.|++
T Consensus       964 hflqsvgpSLV~a~~Gn~lgVYad~a~~ha~stitKiR~d~f~G~lTala~LPLN~-afLaGne~G~IaL 1032 (1034)
T KOG4190|consen  964 HFLQSVGPSLVTAQNGNILGVYADSAELHAESTITKIRPDEFPGTLTALAPLPLNC-AFLAGNEHGAIAL 1032 (1034)
T ss_pred             hhhhccCceeEEeccCcEEEEEecchhhhhhhhhccccccccCCccceeeeccccc-hhhccCCCCceee
Confidence            111 1133 777777777888864332211    1122234555666666555443 2467788888765

>KOG1354|consensus

Probab=98.78  E-value=3.2e-07  Score=89.11  Aligned_cols=217  Identities=14%  Similarity=0.186  Sum_probs=148.1

Q ss_pred             cccEEEEEEcCCCc-EEEEECCCcEEEEcCCC---------------------------------CCCC--CCCCEEEEE
Q psy7057          12 SMDVRSLSVTPDGC-ILSASRDKSAKLWKPND---------------------------------LSPG--AKVNTLLSA   55 (557)
Q Consensus        12 ~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~---------------------------------~~~~--~~~~~l~sg   55 (557)
                      .+-|.++.|...|. |+||+.+|.|.++.-..                                 +.+.  .....++..
T Consensus        25 adiis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLls  104 (433)
T KOG1354|consen   25 ADIISAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLLS  104 (433)
T ss_pred             hcceeeEEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEEe
Confidence            45688999999998 99999999999985433                                 2222  234567888


Q ss_pred             ECCCeEEEEECCCCe-----------------------------------EEEEE-cccCCcEEEEEEcCCCEEEEEECC
Q psy7057          56 SWDMTAKLWCLESQQ-----------------------------------CKLTI-RQHEMAVWGVIQLANGIIVTGCAD   99 (557)
Q Consensus        56 s~Dg~i~iwd~~~~~-----------------------------------~~~~l-~~h~~~V~~l~~~~~~~l~sgs~d   99 (557)
                      +.|++|++|.+....                                   +.+.+ ..|.--|.++.++.++.......|
T Consensus       105 tNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~Et~lSADd  184 (433)
T KOG1354|consen  105 TNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKETFLSADD  184 (433)
T ss_pred             cCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccceEeeccc
Confidence            899999999874321                                   01111 347788999999999855555678


Q ss_pred             CeEEEEeC--CCc--EEEEEeCCC-----CCEEEEEEeCC--CeEEEEECCCeEEEEECCCCeE-E---EEEe-------
Q psy7057         100 KTIKLHSE--EGE--FLKTLTGHT-----DCVRGLAVLND--TDFVSCSNDASIRVWDSTTGKC-V---HTMY-------  157 (557)
Q Consensus       100 g~I~vwd~--~~~--~~~~l~~h~-----~~V~~l~~~~~--~~lvs~s~Dg~I~vwd~~~~~~-~---~~~~-------  157 (557)
                      =.|.+|++  ..+  .+..++.+.     .-|++..|+|.  +.|+-.|..|+|++-|++.... .   ..+.       
T Consensus       185 LRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEepedp~~  264 (433)
T KOG1354|consen  185 LRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLFEEPEDPSS  264 (433)
T ss_pred             eeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhhccccCCcc
Confidence            89999983  222  234444443     45888899987  4577788889999999984321 0   0111       


Q ss_pred             -----CCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC----ceEeeCCc------------cE---EEEEEcCCCc-
Q psy7057         158 -----GHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ----NSFMIPAM------------SV---WAVAILPNSD-  210 (557)
Q Consensus       158 -----~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~----~~~~~~~~------------~v---~~v~~~p~g~-  210 (557)
                           .--..|..+.|  +|+++++-.. -+|++||+...    .+++.|..            .|   ..++|+.++. 
T Consensus       265 rsffseiIsSISDvKFs~sGryilsRDy-ltvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~~sg~~~~  343 (433)
T KOG1354|consen  265 RSFFSEIISSISDVKFSHSGRYILSRDY-LTVKLWDLNMEAKPVETYPVHEYLRSKLCSLYENDAIFDKFECSWSGNDSY  343 (433)
T ss_pred             hhhHHHHhhhhhceEEccCCcEEEEecc-ceeEEEeccccCCcceEEeehHhHHHHHHHHhhccchhheeEEEEcCCcce
Confidence                 11235677778  6677776542 68999996322    55555542            22   4578888777 


Q ss_pred             EEEEEcCCcEEEEecCCCC
Q psy7057         211 IVTGSSDGIVRVFSANPDR  229 (557)
Q Consensus       211 l~sg~~Dg~I~iwd~~~~~  229 (557)
                      +++|+-....|+|+...+.
T Consensus       344 v~TGsy~n~frvf~~~~gs  362 (433)
T KOG1354|consen  344 VMTGSYNNVFRVFNLARGS  362 (433)
T ss_pred             EecccccceEEEecCCCCc
Confidence            8899999999999965543

>KOG1354|consensus

Probab=98.77  E-value=4.6e-07  Score=88.03  Aligned_cols=230  Identities=15%  Similarity=0.169  Sum_probs=149.5

Q ss_pred             CCCCCCCCEEEEEECCCeEEEEECCCCe-----EEEEEcccC------------CcEEEEEEcCCC---EEEEEECCCeE
Q psy7057          43 LSPGAKVNTLLSASWDMTAKLWCLESQQ-----CKLTIRQHE------------MAVWGVIQLANG---IIVTGCADKTI  102 (557)
Q Consensus        43 ~~~~~~~~~l~sgs~Dg~i~iwd~~~~~-----~~~~l~~h~------------~~V~~l~~~~~~---~l~sgs~dg~I  102 (557)
                      +.+...|++|++|..+|.|.++.-+...     ....++.|.            ..|..+.|.+++   .++..+.|++|
T Consensus        31 vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLlstNdkti  110 (433)
T KOG1354|consen   31 VEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLLSTNDKTI  110 (433)
T ss_pred             EEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEEecCCcce
Confidence            4566679999999999999999743322     233444453            467888998865   78888899999


Q ss_pred             EEEeCCCc---E---------------------------------EEEE-eCCCCCEEEEEEeCCCeEEEEECCCeEEEE
Q psy7057         103 KLHSEEGE---F---------------------------------LKTL-TGHTDCVRGLAVLNDTDFVSCSNDASIRVW  145 (557)
Q Consensus       103 ~vwd~~~~---~---------------------------------~~~l-~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vw  145 (557)
                      ++|....+   .                                 .+.+ .+|...|.++++..+...+..+.|-.|.+|
T Consensus       111 KlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~Et~lSADdLRINLW  190 (433)
T KOG1354|consen  111 KLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKETFLSADDLRINLW  190 (433)
T ss_pred             eeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccceEeeccceeeeec
Confidence            99972110   0                                 0111 257788999999999886666678899999


Q ss_pred             ECCCCeE---EEEEeCC-----CCcEEEEEEc---CCEEEEEeCCCeEEEEECCCC-------ceEeeCC----------
Q psy7057         146 DSTTGKC---VHTMYGH-----PNFIYSVAAH---GDLITSGGEDQCVCVYQNKAQ-------NSFMIPA----------  197 (557)
Q Consensus       146 d~~~~~~---~~~~~~h-----~~~V~~l~~~---~~~l~s~s~Dg~I~iwd~~~~-------~~~~~~~----------  197 (557)
                      ++.--..   +-.++.+     +..|++-.|+   -+.++-.+..|+|++-|++..       +.+..+.          
T Consensus       191 nlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEepedp~~rsffse  270 (433)
T KOG1354|consen  191 NLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLFEEPEDPSSRSFFSE  270 (433)
T ss_pred             cccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhhccccCCcchhhHHH
Confidence            9763322   2223333     2456677773   457888899999999998743       1222211          


Q ss_pred             --ccEEEEEEcCCCcEEEEEcCCcEEEEecCCCCcc-h---------hHHHhcccc-ee---EEEeccCCCceeEEEEeC
Q psy7057         198 --MSVWAVAILPNSDIVTGSSDGIVRVFSANPDRQA-E---------DAVQAQYAE-EV---KKLKSANEQEIGGVKVSD  261 (557)
Q Consensus       198 --~~v~~v~~~p~g~l~sg~~Dg~I~iwd~~~~~~~-~---------~~~~~~~~~-~v---~~l~~~~~~~~~~vs~s~  261 (557)
                        ..|..+.|+++|+++.+-.=-+|++||++..... .         ......+.. .+   -.+.+ ..+....+|||-
T Consensus       271 iIsSISDvKFs~sGryilsRDyltvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~~-sg~~~~v~TGsy  349 (433)
T KOG1354|consen  271 IISSISDVKFSHSGRYILSRDYLTVKLWDLNMEAKPVETYPVHEYLRSKLCSLYENDAIFDKFECSW-SGNDSYVMTGSY  349 (433)
T ss_pred             HhhhhhceEEccCCcEEEEeccceeEEEeccccCCcceEEeehHhHHHHHHHHhhccchhheeEEEE-cCCcceEecccc
Confidence              3588999999999666666688999999643221 1         001111110 01   11122 223335789999


Q ss_pred             CCcEEEEecCCC
Q psy7057         262 DGIVRVFSANPD  273 (557)
Q Consensus       262 DG~IrvW~~~~~  273 (557)
                      ...+|||+...+
T Consensus       350 ~n~frvf~~~~g  361 (433)
T KOG1354|consen  350 NNVFRVFNLARG  361 (433)
T ss_pred             cceEEEecCCCC
Confidence            999999996655

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=98.77  E-value=2.3e-06  Score=90.60  Aligned_cols=168  Identities=12%  Similarity=0.077  Sum_probs=112.3

Q ss_pred             eEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECC---CeEEEEeCCCcEEEEEeCCCCCEEEEEEeCCCe-EE
Q psy7057          60 TAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCAD---KTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTD-FV  134 (557)
Q Consensus        60 ~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~d---g~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~~~-lv  134 (557)
                      .|.++|.... ....+..+...+.+..|+|++ .|+.++.+   ..|++||........+..+...+.+++|+|++. |+
T Consensus       171 ~l~~~d~~g~-~~~~l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~spDg~~l~  249 (417)
T TIGR02800       171 ELQVADYDGA-NPQTITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREKVASFPGMNGAPAFSPDGSKLA  249 (417)
T ss_pred             eEEEEcCCCC-CCEEeecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEEeecCCCCccceEECCCCCEEE
Confidence            5778887543 344555577788899999999 66665543   479999965544444555666677899999976 54


Q ss_pred             -EEECCC--eEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeC-CC--eEEEEECCCC--ceEeeCCccEEEEE
Q psy7057         135 -SCSNDA--SIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGE-DQ--CVCVYQNKAQ--NSFMIPAMSVWAVA  204 (557)
Q Consensus       135 -s~s~Dg--~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~-Dg--~I~iwd~~~~--~~~~~~~~~v~~v~  204 (557)
                       +.+.++  .|.+||+.+++.. .+..+........|  +++.|+.++. ++  .|+++++...  ..+......+..+.
T Consensus       250 ~~~~~~~~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~~~l~~~~~~~~~~~  328 (417)
T TIGR02800       250 VSLSKDGNPDIYVMDLDGKQLT-RLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEVRRLTFRGGYNASPS  328 (417)
T ss_pred             EEECCCCCccEEEEECCCCCEE-ECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeecCCCCccCeE
Confidence             444444  5888998876543 34444444445566  7777766554 33  5777786554  44444555677889


Q ss_pred             EcCCCc-EEEEEcCC---cEEEEecCCCC
Q psy7057         205 ILPNSD-IVTGSSDG---IVRVFSANPDR  229 (557)
Q Consensus       205 ~~p~g~-l~sg~~Dg---~I~iwd~~~~~  229 (557)
                      |+|+++ ++.++.++   .|.+|++.++.
T Consensus       329 ~spdg~~i~~~~~~~~~~~i~~~d~~~~~  357 (417)
T TIGR02800       329 WSPDGDLIAFVHREGGGFNIAVMDLDGGG  357 (417)
T ss_pred             ECCCCCEEEEEEccCCceEEEEEeCCCCC
Confidence            999998 66666654   68888887643

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>KOG2139|consensus

Probab=98.76  E-value=4.3e-07  Score=88.76  Aligned_cols=183  Identities=14%  Similarity=0.173  Sum_probs=126.4

Q ss_pred             CCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcEEEEEeC-CCCCEEEEEEeCCC--eEEEEECCCeEEEEECCC----C
Q psy7057          79 EMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFLKTLTG-HTDCVRGLAVLNDT--DFVSCSNDASIRVWDSTT----G  150 (557)
Q Consensus        79 ~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~~~l~~-h~~~V~~l~~~~~~--~lvs~s~Dg~I~vwd~~~----~  150 (557)
                      +..+..++|++.- .++++..|-.|++++.+..+...++. ....|+|++|-|.+  .|+.|+. +-|.+|....    +
T Consensus        98 ~~dlr~~aWhqH~~~fava~nddvVriy~ksst~pt~Lks~sQrnvtclawRPlsaselavgCr-~gIciW~~s~tln~~  176 (445)
T KOG2139|consen   98 EIDLRGVAWHQHIIAFAVATNDDVVRIYDKSSTCPTKLKSVSQRNVTCLAWRPLSASELAVGCR-AGICIWSDSRTLNAN  176 (445)
T ss_pred             hcceeeEeechhhhhhhhhccCcEEEEeccCCCCCceecchhhcceeEEEeccCCcceeeeeec-ceeEEEEcCcccccc
Confidence            3456778888855 78999999999999966666555553 34679999999874  3667666 4588997531    1


Q ss_pred             eE----------EEEEeCCCCcEEEEEE--cCCEEEEEe-CCCeEEEEECCCC--ceEe-eCCccEEEEEEcCCCc-EEE
Q psy7057         151 KC----------VHTMYGHPNFIYSVAA--HGDLITSGG-EDQCVCVYQNKAQ--NSFM-IPAMSVWAVAILPNSD-IVT  213 (557)
Q Consensus       151 ~~----------~~~~~~h~~~V~~l~~--~~~~l~s~s-~Dg~I~iwd~~~~--~~~~-~~~~~v~~v~~~p~g~-l~s  213 (557)
                      ..          +....+| ..|++|.|  +|..+++++ .|..|.|||..+.  ..+. .....+.-+.|+|+++ |++
T Consensus       177 r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~lfa  255 (445)
T KOG2139|consen  177 RNIRMMSTHHLQVLQDPGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVLFA  255 (445)
T ss_pred             cccccccccchhheeCCCC-ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccCCCceeeEEEcCCCCEEEE
Confidence            11          1112234 68999999  777888777 5678999997666  3333 3345788999999999 889


Q ss_pred             EEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcE
Q psy7057         214 GSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIV  265 (557)
Q Consensus       214 g~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~I  265 (557)
                      +.-|+..++|+....-.......  ..+.+..-.+.++....+++++..-.+
T Consensus       256 At~davfrlw~e~q~wt~erw~l--gsgrvqtacWspcGsfLLf~~sgsp~l  305 (445)
T KOG2139|consen  256 ATCDAVFRLWQENQSWTKERWIL--GSGRVQTACWSPCGSFLLFACSGSPRL  305 (445)
T ss_pred             ecccceeeeehhcccceecceec--cCCceeeeeecCCCCEEEEEEcCCceE
Confidence            99999999996543322111111  233677777778877777776654443

>KOG2315|consensus

Probab=98.76  E-value=2.3e-06  Score=88.21  Aligned_cols=265  Identities=11%  Similarity=0.085  Sum_probs=159.8

Q ss_pred             cccEEEEEEcCCCcEEEEECCCcEEEEcCCC--------------CCCCCCCCEEEEE-----ECC-----CeEEEEECC
Q psy7057          12 SMDVRSLSVTPDGCILSASRDKSAKLWKPND--------------LSPGAKVNTLLSA-----SWD-----MTAKLWCLE   67 (557)
Q Consensus        12 ~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~--------------~~~~~~~~~l~sg-----s~D-----g~i~iwd~~   67 (557)
                      ..+++..+++++|+++..+.+..++|++...              +.++|.+.+|.+-     ..+     -.+.+|+++
T Consensus        34 ~~~~~v~~~S~~G~lfA~~~~~~v~i~~~~~~~~~lt~~~~~~~~L~fSP~g~yL~T~e~~~i~~~~~~~~pn~~v~~ve  113 (566)
T KOG2315|consen   34 SRPCNVFAYSNNGRLFAYSDNQVVKVFEIATLKVVLCVELKKTYDLLFSPKGNYLLTWEPWAIYGPKNASNPNVLVYNVE  113 (566)
T ss_pred             CCcceeEEEcCCCcEEEEEcCCeEEEEEccCCcEEEEeccceeeeeeecccccccccccccccccCCCCCCCceeeeeec
Confidence            4457888999999999999999999998765              5566667766542     112     346799988


Q ss_pred             CCeEEEEEcccCCcEEEEEEcCCCEEEEEECCCeEEEEeCCCcEEEEEeCCCCCEEEEEEeCCCe---EE-----EEECC
Q psy7057          68 SQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTD---FV-----SCSND  139 (557)
Q Consensus        68 ~~~~~~~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~~~---lv-----s~s~D  139 (557)
                      ++.....+......-|+..|+.+..++.--..+.+.+|+........-+-|...|..+.++|.+.   ++     ..+.-
T Consensus       114 t~~~~s~~q~k~Q~~W~~qfs~dEsl~arlv~nev~f~~~~~f~~~~~kl~~~~i~~f~lSpgp~~~~vAvyvPe~kGaP  193 (566)
T KOG2315|consen  114 TGVQRSQIQKKMQNGWVPQFSIDESLAARLVSNEVQFYDLGSFKTIQHKLSVSGITMLSLSPGPEPPFVAVYVPEKKGAP  193 (566)
T ss_pred             cceehhheehhhhcCcccccccchhhhhhhhcceEEEEecCCccceeeeeeccceeeEEecCCCCCceEEEEccCCCCCC
Confidence            85544444333223356666666544444444556666633221111122344455555544311   11     11222


Q ss_pred             CeEEEE---------------------------------------------------------ECCCCeEEEEEeCCCCc
Q psy7057         140 ASIRVW---------------------------------------------------------DSTTGKCVHTMYGHPNF  162 (557)
Q Consensus       140 g~I~vw---------------------------------------------------------d~~~~~~~~~~~~h~~~  162 (557)
                      ..++||                                                         ++...++.-.+ ...++
T Consensus       194 a~vri~~~~~~~~~~~~a~ksFFkadkvqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~s~~V~L-~k~GP  272 (566)
T KOG2315|consen  194 ASVRIYKYPEEGQHQPVANKSFFKADKVQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGESVSVPL-LKEGP  272 (566)
T ss_pred             cEEEEeccccccccchhhhccccccceeEEEeccCCceEEEEEEEeecCCCccccccceEEEEEecCceEEEec-CCCCC
Confidence            334443                                                         33311222211 13578


Q ss_pred             EEEEEE--cCCEE--EEEeCCCeEEEEECCCCceEeeCCccEEEEEEcCCCc-EEEEEc---CCcEEEEecCCCCcchhH
Q psy7057         163 IYSVAA--HGDLI--TSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILPNSD-IVTGSS---DGIVRVFSANPDRQAEDA  234 (557)
Q Consensus       163 V~~l~~--~~~~l--~s~s~Dg~I~iwd~~~~~~~~~~~~~v~~v~~~p~g~-l~sg~~---Dg~I~iwd~~~~~~~~~~  234 (557)
                      |.++.|  +++-+  +-|-.-.++.|||++..-.+....++-+++-|+|.|+ ++.+|-   -|.|-|||+.+.+++...
T Consensus       273 Vhdv~W~~s~~EF~VvyGfMPAkvtifnlr~~~v~df~egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~  352 (566)
T KOG2315|consen  273 VHDVTWSPSGREFAVVYGFMPAKVTIFNLRGKPVFDFPEGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRKLIAKF  352 (566)
T ss_pred             ceEEEECCCCCEEEEEEecccceEEEEcCCCCEeEeCCCCCccceEECCCCCEEEEeecCCCCCceEEEeccchhhcccc
Confidence            899999  44433  3445667899999887777777888899999999999 555554   588999999885544322


Q ss_pred             HHhcccceeEEEeccCCCceeEEEEeC-----CCcEEEEecCCChhhHHHHH
Q psy7057         235 VQAQYAEEVKKLKSANEQEIGGVKVSD-----DGIVRVFSANPDRQAEDAVQ  281 (557)
Q Consensus       235 ~~~~~~~~v~~l~~~~~~~~~~vs~s~-----DG~IrvW~~~~~~~~~~~~~  281 (557)
                      ..    ...+...|.++.+..+.+.++     |..++||+............
T Consensus       353 ~a----~~tt~~eW~PdGe~flTATTaPRlrvdNg~KiwhytG~~l~~~~f~  400 (566)
T KOG2315|consen  353 KA----ANTTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHYTGSLLHEKMFK  400 (566)
T ss_pred             cc----CCceEEEEcCCCcEEEEEeccccEEecCCeEEEEecCceeehhhhh
Confidence            21    223345567777765533333     89999999998776655433

>PRK00178 tolB translocation protein TolB; Provisional

Probab=98.74  E-value=1.7e-06  Score=92.12  Aligned_cols=201  Identities=14%  Similarity=0.036  Sum_probs=118.3

Q ss_pred             EEeccCcccEEEEEEcCCCc-EEEEECC---CcEEEEcCCC---------------CCCCCCCCEEE-EEECCC--eEEE
Q psy7057           6 TALYGHSMDVRSLSVTPDGC-ILSASRD---KSAKLWKPND---------------LSPGAKVNTLL-SASWDM--TAKL   63 (557)
Q Consensus         6 ~~l~gH~~~V~~l~~spdg~-l~sgs~D---g~V~iWd~~~---------------~~~~~~~~~l~-sgs~Dg--~i~i   63 (557)
                      +.+..|...+...+|+|||+ |+..+.+   ..|.+|++.+               ..++|+++.|+ +.+.++  .|.+
T Consensus       192 ~~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~l~~~~g~~~~~~~SpDG~~la~~~~~~g~~~Iy~  271 (430)
T PRK00178        192 VTLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQITNFEGLNGAPAWSPDGSKLAFVLSKDGNPEIYV  271 (430)
T ss_pred             eEEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEEccCCCCCcCCeEECCCCCEEEEEEccCCCceEEE
Confidence            34556777889999999998 7655533   3588888864               46778888876 455555  5788


Q ss_pred             EECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEE-CCC--eEEEEeCCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEE-
Q psy7057          64 WCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGC-ADK--TIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCS-  137 (557)
Q Consensus        64 wd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs-~dg--~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s-  137 (557)
                      ||+.+++.. .+..+........|+|++ .|+..+ .++  .|.+++..+.....+...........|+|++. ++..+ 
T Consensus       272 ~d~~~~~~~-~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~lt~~~~~~~~~~~Spdg~~i~~~~~  350 (430)
T PRK00178        272 MDLASRQLS-RVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAERVTFVGNYNARPRLSADGKTLVMVHR  350 (430)
T ss_pred             EECCCCCeE-EcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeecCCCCccceEECCCCCEEEEEEc
Confidence            899887643 455555566678899998 554444 344  46666754333333332223334568899977 44333 


Q ss_pred             CCC--eEEEEECCCCeEEEEEeCCCCcEEEEEEcCCEEEEEeC-CC--eEEEEECCCC--ceEeeCCccEEEEEEcC
Q psy7057         138 NDA--SIRVWDSTTGKCVHTMYGHPNFIYSVAAHGDLITSGGE-DQ--CVCVYQNKAQ--NSFMIPAMSVWAVAILP  207 (557)
Q Consensus       138 ~Dg--~I~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~l~s~s~-Dg--~I~iwd~~~~--~~~~~~~~~v~~v~~~p  207 (557)
                      .++  .|.+||+.+++...........-.+++.+|+.++..+. ++  .|.+++....  +.+..+...+...+|+|
T Consensus       351 ~~~~~~l~~~dl~tg~~~~lt~~~~~~~p~~spdg~~i~~~~~~~g~~~l~~~~~~g~~~~~l~~~~g~~~~p~ws~  427 (430)
T PRK00178        351 QDGNFHVAAQDLQRGSVRILTDTSLDESPSVAPNGTMLIYATRQQGRGVLMLVSINGRVRLPLPTAQGEVREPSWSP  427 (430)
T ss_pred             cCCceEEEEEECCCCCEEEccCCCCCCCceECCCCCEEEEEEecCCceEEEEEECCCCceEECcCCCCCcCCCccCC
Confidence            333  58889988776432211111111123337776665543 33  4556665433  23433444555566655

>KOG0280|consensus

Probab=98.74  E-value=3.9e-07  Score=86.89  Aligned_cols=213  Identities=15%  Similarity=0.125  Sum_probs=140.6

Q ss_pred             ccEEEEEEcC---CCc--EEEEECCCcEEEEcCCC----------------------CCCCCCCCEEEEEECCCeEEEEE
Q psy7057          13 MDVRSLSVTP---DGC--ILSASRDKSAKLWKPND----------------------LSPGAKVNTLLSASWDMTAKLWC   65 (557)
Q Consensus        13 ~~V~~l~~sp---dg~--l~sgs~Dg~V~iWd~~~----------------------~~~~~~~~~l~sgs~Dg~i~iwd   65 (557)
                      +.+..+.|+.   +|.  |+-+-.+|.|.++....                      +.++..+..++++-.+|.+.+-+
T Consensus        70 s~~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~~ss~~L~~ls~~ki~~~~~lslD~~~~~~~i~vs~s~G~~~~v~  149 (339)
T KOG0280|consen   70 STEFDMLWRIRETDGDFNLLDAHARGQIQLYRNDEDESSVHLRGLSSKKISVVEALSLDISTSGTKIFVSDSRGSISGVY  149 (339)
T ss_pred             cccceeeeeeccCCccceeeeccccceEEEEeeccceeeeeecccchhhhhheeeeEEEeeccCceEEEEcCCCcEEEEe
Confidence            4455666653   333  56677788888886654                      34455567788888889988666


Q ss_pred             CCCCeEE--EEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEeCC--CcEEEE-EeCCCCCEEEEEEeCC-C-eEEEE
Q psy7057          66 LESQQCK--LTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHSEE--GEFLKT-LTGHTDCVRGLAVLND-T-DFVSC  136 (557)
Q Consensus        66 ~~~~~~~--~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~~--~~~~~~-l~~h~~~V~~l~~~~~-~-~lvs~  136 (557)
                      .......  .+++.|.-..+.+.|+...  ++.+|+.|+.+..||..  ++.+.. .+-|...|.+|.-+|. + .+++|
T Consensus       150 ~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~n~kvH~~GV~SI~ss~~~~~~I~TG  229 (339)
T KOG0280|consen  150 ETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWHNSKVHTSGVVSIYSSPPKPTYIATG  229 (339)
T ss_pred             cceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcceeeecceeeecceEEEecCCCCCceEEEe
Confidence            5555443  4789999999999998754  89999999999999943  444444 5679999999998876 3 37899


Q ss_pred             ECCCeEEEEECC-CCeEEEEEeCCCCcEEEEEEcCC---EEEEEeCCCeEEEEECCCC--------ceEeeCCccEEEEE
Q psy7057         137 SNDASIRVWDST-TGKCVHTMYGHPNFIYSVAAHGD---LITSGGEDQCVCVYQNKAQ--------NSFMIPAMSVWAVA  204 (557)
Q Consensus       137 s~Dg~I~vwd~~-~~~~~~~~~~h~~~V~~l~~~~~---~l~s~s~Dg~I~iwd~~~~--------~~~~~~~~~v~~v~  204 (557)
                      +.|..|++||.| .++++..-. -.+.|+.+...+.   .++.++.-.-.+|-+....        .....|.+-++.-.
T Consensus       230 sYDe~i~~~DtRnm~kPl~~~~-v~GGVWRi~~~p~~~~~lL~~CMh~G~ki~~~~~~~~e~~~~~~s~~~hdSl~YG~D  308 (339)
T KOG0280|consen  230 SYDECIRVLDTRNMGKPLFKAK-VGGGVWRIKHHPEIFHRLLAACMHNGAKILDSSDKVLEFQIVLPSDKIHDSLCYGGD  308 (339)
T ss_pred             ccccceeeeehhcccCccccCc-cccceEEEEecchhhhHHHHHHHhcCceEEEecccccchheeeeccccccceeeccc
Confidence            999999999998 466655432 3578888887332   2333333333444442211        22234555555555


Q ss_pred             EcCC-CcEEEEE-cCCcEE-EEecC
Q psy7057         205 ILPN-SDIVTGS-SDGIVR-VFSAN  226 (557)
Q Consensus       205 ~~p~-g~l~sg~-~Dg~I~-iwd~~  226 (557)
                      |... +-+++|+ .|+.++ +|-.-
T Consensus       309 Wd~~~~~lATCsFYDk~~~~~Wl~~  333 (339)
T KOG0280|consen  309 WDSKDSFLATCSFYDKKIRQLWLHI  333 (339)
T ss_pred             cccccceeeeeeccccceeeeeeec
Confidence            5322 2266655 377655 67543

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=98.71  E-value=8.6e-06  Score=95.17  Aligned_cols=214  Identities=15%  Similarity=0.165  Sum_probs=138.9

Q ss_pred             EEEEEcCC-Cc-EEEEECCCcEEEEcCCC-----------------------------CCCCCCCCEEEEEE-CCCeEEE
Q psy7057          16 RSLSVTPD-GC-ILSASRDKSAKLWKPND-----------------------------LSPGAKVNTLLSAS-WDMTAKL   63 (557)
Q Consensus        16 ~~l~~spd-g~-l~sgs~Dg~V~iWd~~~-----------------------------~~~~~~~~~l~sgs-~Dg~i~i   63 (557)
                      ..++++++ +. +++-+.++.|++||...                             ++++++++.|+.+. ..+.|++
T Consensus       571 ~gvavd~~~g~lyVaDs~n~rI~v~d~~G~~i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaDt~n~~Ir~  650 (1057)
T PLN02919        571 GKLAIDLLNNRLFISDSNHNRIVVTDLDGNFIVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVADTENHALRE  650 (1057)
T ss_pred             ceEEEECCCCeEEEEECCCCeEEEEeCCCCEEEEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEeCCCceEEE
Confidence            35777764 55 45666778899888655                             22333455555544 4567888


Q ss_pred             EECCCCeEEEEEccc-----------------CCcEEEEEEcC-CC-EEEEEECCCeEEEEeCCCcEEEEEeCC------
Q psy7057          64 WCLESQQCKLTIRQH-----------------EMAVWGVIQLA-NG-IIVTGCADKTIKLHSEEGEFLKTLTGH------  118 (557)
Q Consensus        64 wd~~~~~~~~~l~~h-----------------~~~V~~l~~~~-~~-~l~sgs~dg~I~vwd~~~~~~~~l~~h------  118 (557)
                      +|+.++. +.++.+-                 -...+.++++| ++ ++++.+.++.|++||.....+..+.+.      
T Consensus       651 id~~~~~-V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~~~~G~G~~~~~  729 (1057)
T PLN02919        651 IDFVNET-VRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTRVFSGDGYERNL  729 (1057)
T ss_pred             EecCCCE-EEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECCCCeEEEEecCCccccC
Confidence            9887754 3333210                 12346789998 45 667777889999999655444443221      


Q ss_pred             ---------CCCEEEEEEeCCCe--EEEEECCCeEEEEECCCCeEEEEEeC-------------C--------CCcEEEE
Q psy7057         119 ---------TDCVRGLAVLNDTD--FVSCSNDASIRVWDSTTGKCVHTMYG-------------H--------PNFIYSV  166 (557)
Q Consensus       119 ---------~~~V~~l~~~~~~~--lvs~s~Dg~I~vwd~~~~~~~~~~~~-------------h--------~~~V~~l  166 (557)
                               -.....|+++|++.  +++-+.++.|++||+.++.......+             +        -.....+
T Consensus       730 ~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gv  809 (1057)
T PLN02919        730 NGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGV  809 (1057)
T ss_pred             CCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCcee
Confidence                     12456799999865  45777789999999887653211100             0        0122466


Q ss_pred             EE--cCCEEEEEeCCCeEEEEECCCC--ceEeeC--------------CccEEEEEEcCCCc-EEEEEcCCcEEEEecCC
Q psy7057         167 AA--HGDLITSGGEDQCVCVYQNKAQ--NSFMIP--------------AMSVWAVAILPNSD-IVTGSSDGIVRVFSANP  227 (557)
Q Consensus       167 ~~--~~~~l~s~s~Dg~I~iwd~~~~--~~~~~~--------------~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~  227 (557)
                      ++  +|+.+++-+.+++|++||..+.  ..+.+.              -.....++++++|+ +++-+.+++|++|++.+
T Consensus       810 avd~dG~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid~~~  889 (1057)
T PLN02919        810 LCAKDGQIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLIRYLDLNK  889 (1057)
T ss_pred             eEeCCCcEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEEEEEECCC
Confidence            66  5678888889999999997654  222211              12467899999999 66777899999999987


Q ss_pred             CCc
Q psy7057         228 DRQ  230 (557)
Q Consensus       228 ~~~  230 (557)
                      ...
T Consensus       890 ~~~  892 (1057)
T PLN02919        890 GEA  892 (1057)
T ss_pred             Ccc
Confidence            653

>KOG3914|consensus

Probab=98.69  E-value=8.9e-08  Score=94.84  Aligned_cols=149  Identities=21%  Similarity=0.252  Sum_probs=98.3

Q ss_pred             eccCcccEEEEEEcCCCc--EEEEECCCcEEEEcCCCC-------CCCCCCCEEEE---EECCCeEEEEECCCCeEEEEE
Q psy7057           8 LYGHSMDVRSLSVTPDGC--ILSASRDKSAKLWKPNDL-------SPGAKVNTLLS---ASWDMTAKLWCLESQQCKLTI   75 (557)
Q Consensus         8 l~gH~~~V~~l~~spdg~--l~sgs~Dg~V~iWd~~~~-------~~~~~~~~l~s---gs~Dg~i~iwd~~~~~~~~~l   75 (557)
                      +..|.+...+++.++...  +..-..+...++|+...+       .+.........   ++....+.+|....+.+ ..+
T Consensus        69 ~~s~~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~~~~-~~~  147 (390)
T KOG3914|consen   69 LTSDSGRLVAVATSSKQRAVFDYRENPKGAKLLDVSCVPKRPTAISFIREDTSVLVADKAGDVYSFDILSADSGRC-EPI  147 (390)
T ss_pred             ccCCCceEEEEEeCCCceEEEEEecCCCcceeeeEeecccCcceeeeeeccceEEEEeecCCceeeeeecccccCc-chh
Confidence            344555555555555544  223333334555554432       22222222222   23334455555544333 345


Q ss_pred             cccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCC-cEEEE-EeCCCCCEEEEEEeCCCeEEEEECCCeEEEEECCCCeE
Q psy7057          76 RQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEG-EFLKT-LTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKC  152 (557)
Q Consensus        76 ~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~-~~~~~-l~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~~  152 (557)
                      -+|-..++.++++||+ .|+++..|..|++-.... ..+.. ..||+.-|..++..++..|+|+|.|++|++||+++|++
T Consensus       148 lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~~~~LlS~sGD~tlr~Wd~~sgk~  227 (390)
T KOG3914|consen  148 LGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTDNYLLLSGSGDKTLRLWDITSGKL  227 (390)
T ss_pred             hhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeeeccCceeeecCCCCcEEEEecccCCc
Confidence            5799999999999998 999999999999966332 23333 35899999999999888899999999999999999999


Q ss_pred             EEEEe
Q psy7057         153 VHTMY  157 (557)
Q Consensus       153 ~~~~~  157 (557)
                      +.++.
T Consensus       228 L~t~d  232 (390)
T KOG3914|consen  228 LDTCD  232 (390)
T ss_pred             ccccc
Confidence            87764

>KOG0309|consensus

Probab=98.68  E-value=5.5e-08  Score=102.44  Aligned_cols=185  Identities=18%  Similarity=0.189  Sum_probs=133.5

Q ss_pred             EEEEeccCcccEEEEEEcCCCc--EEEEECCCcEEEEcCCC-----------------CCCCCCCCEEEEEECCCeEEEE
Q psy7057           4 LSTALYGHSMDVRSLSVTPDGC--ILSASRDKSAKLWKPND-----------------LSPGAKVNTLLSASWDMTAKLW   64 (557)
Q Consensus         4 l~~~l~gH~~~V~~l~~spdg~--l~sgs~Dg~V~iWd~~~-----------------~~~~~~~~~l~sgs~Dg~i~iw   64 (557)
                      +.-.|.||+..|+.+-|.|+..  |++++-|-.|..||+.+                 +.++-....+++.+....|++|
T Consensus       106 Ief~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vlasshg~~i~vw  185 (1081)
T KOG0309|consen  106 IEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLASSHGNDIFVW  185 (1081)
T ss_pred             eEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeecccccCceeeecccCcchhhhccCCceEEE
Confidence            3456889999999999999876  88999999999999987                 3444444556667778889999


Q ss_pred             ECCCC-eEEEEEcccCCcEEEEEEcCC--CEEEEEECCCeEEEEeCC--CcEEEEEeCCCCCEEEEEEeCCC--eEE---
Q psy7057          65 CLESQ-QCKLTIRQHEMAVWGVIQLAN--GIIVTGCADKTIKLHSEE--GEFLKTLTGHTDCVRGLAVLNDT--DFV---  134 (557)
Q Consensus        65 d~~~~-~~~~~l~~h~~~V~~l~~~~~--~~l~sgs~dg~I~vwd~~--~~~~~~l~~h~~~V~~l~~~~~~--~lv---  134 (557)
                      |++.| .++..+++|...|..+.|..-  +.+.+.+.|+++++||.+  .+.-........+|+--++.|-+  .++   
T Consensus       186 d~r~gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~e~~~~vtt~~piw~~r~~Pfg~g~~~mp~  265 (1081)
T KOG0309|consen  186 DLRKGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTTESKRTVTTNFPIWRGRYLPFGEGYCIMPM  265 (1081)
T ss_pred             eccCCCcceEEecccceeeehHHHhhhhhhhhcccCCCCceeeecccccccccceeccccCcceeccccccCceeEeccc
Confidence            99876 578899999999999999873  489999999999999932  22222222334556655555543  222   


Q ss_pred             EEEC-------CCeEEEEECCC-CeEEEEEeCCCCcEEEEEE------cCC------EEEEEeCCCeEEEEECC
Q psy7057         135 SCSN-------DASIRVWDSTT-GKCVHTMYGHPNFIYSVAA------HGD------LITSGGEDQCVCVYQNK  188 (557)
Q Consensus       135 s~s~-------Dg~I~vwd~~~-~~~~~~~~~h~~~V~~l~~------~~~------~l~s~s~Dg~I~iwd~~  188 (557)
                      .|+.       +.....|+..+ .+++++|.||++.|....|      +++      .|++=|.|.++|+|-+.
T Consensus       266 ~G~n~v~~~~c~n~d~e~n~~~~~~pVh~F~GH~D~V~eFlWR~r~e~~~d~d~rdfQLVTWSkD~~lrlWpI~  339 (1081)
T KOG0309|consen  266 VGGNMVPQLRCENSDLEWNVFDLNTPVHTFVGHDDVVLEFLWRKRKECDGDYDSRDFQLVTWSKDQTLRLWPID  339 (1081)
T ss_pred             cCCeeeeeccccchhhhhccccCCcceeeecCcchHHHHHhhhhcccccCCCCccceeEEEeecCCceEeeecc
Confidence            1211       12223344433 4689999999998877665      111      69999999999999754

>PRK00178 tolB translocation protein TolB; Provisional

Probab=98.66  E-value=1.5e-05  Score=84.88  Aligned_cols=169  Identities=12%  Similarity=0.039  Sum_probs=107.5

Q ss_pred             eEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECC---CeEEEEeCCCcEEEEEeCCCCCEEEEEEeCCCe-EE
Q psy7057          60 TAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCAD---KTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTD-FV  134 (557)
Q Consensus        60 ~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~d---g~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~~~-lv  134 (557)
                      .|.++|.+.+. ...+..+...+....|+|+| .|+..+.+   ..|.+|+..+.....+......+....|+|++. ++
T Consensus       180 ~l~~~d~~g~~-~~~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~l~~~~g~~~~~~~SpDG~~la  258 (430)
T PRK00178        180 TLQRSDYDGAR-AVTLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQITNFEGLNGAPAWSPDGSKLA  258 (430)
T ss_pred             EEEEECCCCCC-ceEEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEEccCCCCCcCCeEECCCCCEEE
Confidence            47777876544 34555677788999999999 66655533   358888865544444544445566789999986 44


Q ss_pred             -EEECCC--eEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeC-CC--eEEEEECCCC--ceEeeCCccEEEEE
Q psy7057         135 -SCSNDA--SIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGE-DQ--CVCVYQNKAQ--NSFMIPAMSVWAVA  204 (557)
Q Consensus       135 -s~s~Dg--~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~-Dg--~I~iwd~~~~--~~~~~~~~~v~~v~  204 (557)
                       +.+.++  .|.+||+.+++.. .+..+........|  +++.|+..+. ++  .|+++++...  ..+...........
T Consensus       259 ~~~~~~g~~~Iy~~d~~~~~~~-~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~lt~~~~~~~~~~  337 (430)
T PRK00178        259 FVLSKDGNPEIYVMDLASRQLS-RVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAERVTFVGNYNARPR  337 (430)
T ss_pred             EEEccCCCceEEEEECCCCCeE-EcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeecCCCCccceE
Confidence             455555  5888898877653 35545555555666  6776665543 33  5777776544  33332233345678


Q ss_pred             EcCCCc-EEEEEc-CC--cEEEEecCCCCc
Q psy7057         205 ILPNSD-IVTGSS-DG--IVRVFSANPDRQ  230 (557)
Q Consensus       205 ~~p~g~-l~sg~~-Dg--~I~iwd~~~~~~  230 (557)
                      |+|+|+ ++..+. ++  .|.+||+.++..
T Consensus       338 ~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~  367 (430)
T PRK00178        338 LSADGKTLVMVHRQDGNFHVAAQDLQRGSV  367 (430)
T ss_pred             ECCCCCEEEEEEccCCceEEEEEECCCCCE
Confidence            999998 544443 33  478888876643

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=98.65  E-value=2.1e-05  Score=81.54  Aligned_cols=181  Identities=13%  Similarity=0.125  Sum_probs=121.5

Q ss_pred             CEE-EEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEE
Q psy7057          50 NTL-LSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLA  126 (557)
Q Consensus        50 ~~l-~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~  126 (557)
                      +++ ++-..++.|.+.|..+.+.+.++.........+.++|++ .+.+++.|+.|.++| .+.+.+.++.. .....+++
T Consensus         6 ~l~~V~~~~~~~v~viD~~t~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~-G~~~~~i~   84 (369)
T PF02239_consen    6 NLFYVVERGSGSVAVIDGATNKVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKV-GGNPRGIA   84 (369)
T ss_dssp             GEEEEEEGGGTEEEEEETTT-SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE--SSEEEEEE
T ss_pred             cEEEEEecCCCEEEEEECCCCeEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEec-CCCcceEE
Confidence            445 445568999999999999999998665555567899988 777788999999999 56777778774 34578899


Q ss_pred             EeCCCeEE--EEECCCeEEEEECCCCeEEEEEeCC-------CCcEEEEEE--cCC-EEEEEeCCCeEEEEECCCCc---
Q psy7057         127 VLNDTDFV--SCSNDASIRVWDSTTGKCVHTMYGH-------PNFIYSVAA--HGD-LITSGGEDQCVCVYQNKAQN---  191 (557)
Q Consensus       127 ~~~~~~lv--s~s~Dg~I~vwd~~~~~~~~~~~~h-------~~~V~~l~~--~~~-~l~s~s~Dg~I~iwd~~~~~---  191 (557)
                      ++++|+++  ++...+.+.++|.++.++++++...       ...+.++..  ... ++++--+.+.|.+.|.....   
T Consensus        85 ~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~~~  164 (369)
T PF02239_consen   85 VSPDGKYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKNLK  164 (369)
T ss_dssp             E--TTTEEEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSCEE
T ss_pred             EcCCCCEEEEEecCCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEeccccccc
Confidence            99998843  5567899999999999999887643       345666655  334 44455555888888855431   


Q ss_pred             -eEeeCCccEEEEEEcCCCc-EE-EEEcCCcEEEEecCCCCcc
Q psy7057         192 -SFMIPAMSVWAVAILPNSD-IV-TGSSDGIVRVFSANPDRQA  231 (557)
Q Consensus       192 -~~~~~~~~v~~v~~~p~g~-l~-sg~~Dg~I~iwd~~~~~~~  231 (557)
                       .............|.|+++ ++ +.-.++.|-++|..+....
T Consensus       165 ~~~i~~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~~~k~v  207 (369)
T PF02239_consen  165 VTTIKVGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTKTGKLV  207 (369)
T ss_dssp             EEEEE--TTEEEEEE-TTSSEEEEEEGGGTEEEEEETTTTEEE
T ss_pred             eeeecccccccccccCcccceeeecccccceeEEEeeccceEE
Confidence             2223445678899999998 44 4456778999998876554

...

>PRK04792 tolB translocation protein TolB; Provisional

Probab=98.63  E-value=3.1e-06  Score=90.36  Aligned_cols=198  Identities=14%  Similarity=0.033  Sum_probs=114.1

Q ss_pred             eccCcccEEEEEEcCCCc-EEEEEC-CC--cEEEEcCCC---------------CCCCCCCCEEEE-EECCCe--EEEEE
Q psy7057           8 LYGHSMDVRSLSVTPDGC-ILSASR-DK--SAKLWKPND---------------LSPGAKVNTLLS-ASWDMT--AKLWC   65 (557)
Q Consensus         8 l~gH~~~V~~l~~spdg~-l~sgs~-Dg--~V~iWd~~~---------------~~~~~~~~~l~s-gs~Dg~--i~iwd   65 (557)
                      +..+...+.+..|+|||+ |+..+. ++  .|.+||+.+               ..++|+++.|+. .+.++.  |.++|
T Consensus       213 l~~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~lt~~~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~d  292 (448)
T PRK04792        213 LLRSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREKVTSFPGINGAPRFSPDGKKLALVLSKDGQPEIYVVD  292 (448)
T ss_pred             eecCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEEecCCCCCcCCeeECCCCCEEEEEEeCCCCeEEEEEE
Confidence            344556778899999998 665443 33  477778654               467788987764 566665  77778


Q ss_pred             CCCCeEEEEEcccCCcEEEEEEcCCC-EEEE-EECCCe--EEEEeCCCcEEEEEeCCCCCEEEEEEeCCCe-EE-EEECC
Q psy7057          66 LESQQCKLTIRQHEMAVWGVIQLANG-IIVT-GCADKT--IKLHSEEGEFLKTLTGHTDCVRGLAVLNDTD-FV-SCSND  139 (557)
Q Consensus        66 ~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~s-gs~dg~--I~vwd~~~~~~~~l~~h~~~V~~l~~~~~~~-lv-s~s~D  139 (557)
                      +.+++. ..+..+........|+|++ .|+. ...++.  |.++|..+.....+..+.......+|+|++. ++ +...+
T Consensus       293 l~tg~~-~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~Lt~~g~~~~~~~~SpDG~~l~~~~~~~  371 (448)
T PRK04792        293 IATKAL-TRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSRLTFEGEQNLGGSITPDGRSMIMVNRTN  371 (448)
T ss_pred             CCCCCe-EECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEEecCCCCCcCeeECCCCCEEEEEEecC
Confidence            887654 3444455566778999998 4444 434444  5555654433444432223334568999987 43 33334


Q ss_pred             C--eEEEEECCCCeEEEEEeCC-CCcEEEEEEcCCEEEEEe-CCCe--EEEEECCCC--ceEeeCCccEEEEEEcC
Q psy7057         140 A--SIRVWDSTTGKCVHTMYGH-PNFIYSVAAHGDLITSGG-EDQC--VCVYQNKAQ--NSFMIPAMSVWAVAILP  207 (557)
Q Consensus       140 g--~I~vwd~~~~~~~~~~~~h-~~~V~~l~~~~~~l~s~s-~Dg~--I~iwd~~~~--~~~~~~~~~v~~v~~~p  207 (557)
                      +  .|.++|+.+++.. .+... ...-.+.+.+++.|+..+ .++.  +++++....  ..+..+...+...+|+|
T Consensus       372 g~~~I~~~dl~~g~~~-~lt~~~~d~~ps~spdG~~I~~~~~~~g~~~l~~~~~~G~~~~~l~~~~g~~~~p~Wsp  446 (448)
T PRK04792        372 GKFNIARQDLETGAMQ-VLTSTRLDESPSVAPNGTMVIYSTTYQGKQVLAAVSIDGRFKARLPAGQGEVKSPAWSP  446 (448)
T ss_pred             CceEEEEEECCCCCeE-EccCCCCCCCceECCCCCEEEEEEecCCceEEEEEECCCCceEECcCCCCCcCCCccCC
Confidence            4  4556787777643 23221 111112333777655443 4443  566665433  34444444566666766

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=98.62  E-value=6.5e-05  Score=77.48  Aligned_cols=231  Identities=12%  Similarity=0.120  Sum_probs=143.2

Q ss_pred             CCCCCCCCEEEEEEC----CCeEEEEECCCC--e--EEEEEcccCCcEEEEEEcCCC-EEEEEE-CCCeEEEEeCC--Cc
Q psy7057          43 LSPGAKVNTLLSASW----DMTAKLWCLESQ--Q--CKLTIRQHEMAVWGVIQLANG-IIVTGC-ADKTIKLHSEE--GE  110 (557)
Q Consensus        43 ~~~~~~~~~l~sgs~----Dg~i~iwd~~~~--~--~~~~l~~h~~~V~~l~~~~~~-~l~sgs-~dg~I~vwd~~--~~  110 (557)
                      +.+++++++|.+...    ++.|..|++...  +  .+.+........+.++++|++ .|+++. .+|.+.++++.  +.
T Consensus        42 l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~~g~  121 (345)
T PF10282_consen   42 LAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCHIAVDPDGRFLYVANYGGGSVSVFPLDDDGS  121 (345)
T ss_dssp             EEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSE
T ss_pred             EEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcEEEEEecCCCEEEEEEccCCeEEEEEccCCcc
Confidence            566778899998887    468888887653  3  333344345667789999988 555554 68999999843  44


Q ss_pred             EEEE---Ee----------CCCCCEEEEEEeCCCeEE--EEECCCeEEEEECCCCe--E--EEEEe-CCCCcEEEEEE--
Q psy7057         111 FLKT---LT----------GHTDCVRGLAVLNDTDFV--SCSNDASIRVWDSTTGK--C--VHTMY-GHPNFIYSVAA--  168 (557)
Q Consensus       111 ~~~~---l~----------~h~~~V~~l~~~~~~~lv--s~s~Dg~I~vwd~~~~~--~--~~~~~-~h~~~V~~l~~--  168 (557)
                      ....   +.          .......++.++|+++++  +.-....|.+|++....  .  ...+. ......+.+.|  
T Consensus       122 l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~p  201 (345)
T PF10282_consen  122 LGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSP  201 (345)
T ss_dssp             EEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-T
T ss_pred             cceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcC
Confidence            3222   21          123457889999998743  33345679999987644  3  22333 34566788888  


Q ss_pred             cCCEEE-EEeCCCeEEEEECC--CC-----ceEeeC------CccEEEEEEcCCCc--EEEEEcCCcEEEEecCCC--Cc
Q psy7057         169 HGDLIT-SGGEDQCVCVYQNK--AQ-----NSFMIP------AMSVWAVAILPNSD--IVTGSSDGIVRVFSANPD--RQ  230 (557)
Q Consensus       169 ~~~~l~-s~s~Dg~I~iwd~~--~~-----~~~~~~------~~~v~~v~~~p~g~--l~sg~~Dg~I~iwd~~~~--~~  230 (557)
                      ++++++ +.-.+++|.+++..  ..     +.+...      ......++++|+|+  +++....++|.+|+++..  ..
T Consensus       202 dg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l  281 (345)
T PF10282_consen  202 DGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNRGSNSISVFDLDPATGTL  281 (345)
T ss_dssp             TSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTE
T ss_pred             CcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEEeccCCEEEEEEEecCCCce
Confidence            566655 45567889999865  22     122111      12578899999999  445556888999999532  22


Q ss_pred             chhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCC
Q psy7057         231 AEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPD  273 (557)
Q Consensus       231 ~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~  273 (557)
                      ...............+...+.....+++.-.++.|.+|++++.
T Consensus       282 ~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~d~~  324 (345)
T PF10282_consen  282 TLVQTVPTGGKFPRHFAFSPDGRYLYVANQDSNTVSVFDIDPD  324 (345)
T ss_dssp             EEEEEEEESSSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETT
T ss_pred             EEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCeEEEEEEeCC
Confidence            2111111112224566666777766677778899999988643

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>KOG1409|consensus

Probab=98.60  E-value=1.2e-06  Score=85.36  Aligned_cols=227  Identities=15%  Similarity=0.144  Sum_probs=149.5

Q ss_pred             CCCCEEEEEECCCeEEEEEC-CCCeEEEEEcc-cCCcEEEEEEcCCC-EEEEEECCCeEEEEeC-----CCcEEEEEeCC
Q psy7057          47 AKVNTLLSASWDMTAKLWCL-ESQQCKLTIRQ-HEMAVWGVIQLANG-IIVTGCADKTIKLHSE-----EGEFLKTLTGH  118 (557)
Q Consensus        47 ~~~~~l~sgs~Dg~i~iwd~-~~~~~~~~l~~-h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~-----~~~~~~~l~~h  118 (557)
                      +..+-+++.+.|.++|||-- +.++.-..+.. -..+++++.+.++. .|+.|-..|++.-+..     .....+....|
T Consensus        34 ~~e~gv~~~s~drtvrv~lkrds~q~wpsI~~~mP~~~~~~~y~~e~~~L~vg~~ngtvtefs~sedfnkm~~~r~~~~h  113 (404)
T KOG1409|consen   34 PKEEGVISVSEDRTVRVWLKRDSGQYWPSIYHYMPSPCSAMEYVSESRRLYVGQDNGTVTEFALSEDFNKMTFLKDYLAH  113 (404)
T ss_pred             cCCCCeEEccccceeeeEEeccccccCchhhhhCCCCceEeeeeccceEEEEEEecceEEEEEhhhhhhhcchhhhhhhh
Confidence            34667999999999999964 33443333321 25678889988877 8888999999988862     23345566789


Q ss_pred             CCCEEEEEEeCCCe-EEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEEcCCEEEEEeCCCeEEEEEC--CCC---ce
Q psy7057         119 TDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQN--KAQ---NS  192 (557)
Q Consensus       119 ~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~l~s~s~Dg~I~iwd~--~~~---~~  192 (557)
                      ...|..+.|+-... +++++.|..+.---.+.+..+..+.- ...-.++.++-.+...|...|.|.+-.+  ..+   .+
T Consensus       114 ~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~~-~~~~t~~~~d~~~~fvGd~~gqvt~lr~~~~~~~~i~~  192 (404)
T KOG1409|consen  114 QARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGGYNF-ETPASALQFDALYAFVGDHSGQITMLKLEQNGCQLITT  192 (404)
T ss_pred             hcceeeEEecCCceeEEEeccccceEEEeeccCCcccceEe-eccCCCCceeeEEEEecccccceEEEEEeecCCceEEE
Confidence            99999999986654 77888888776555455443322210 0111111121114445555555544442  112   67


Q ss_pred             EeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecC
Q psy7057         193 FMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSAN  271 (557)
Q Consensus       193 ~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~  271 (557)
                      +.+|...+++++|.|... +++|.+|..+.+||+...+.. ......+...+..+...+.. ..+++++.||.|.+|+.+
T Consensus       193 ~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~-~~el~gh~~kV~~l~~~~~t-~~l~S~~edg~i~~w~mn  270 (404)
T KOG1409|consen  193 FNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGT-AYELQGHNDKVQALSYAQHT-RQLISCGEDGGIVVWNMN  270 (404)
T ss_pred             EcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcce-eeeeccchhhhhhhhhhhhh-eeeeeccCCCeEEEEecc
Confidence            778999999999999877 889999999999999765433 22333444445544443332 247899999999999998


Q ss_pred             CChhh
Q psy7057         272 PDRQA  276 (557)
Q Consensus       272 ~~~~~  276 (557)
                      -.|..
T Consensus       271 ~~r~e  275 (404)
T KOG1409|consen  271 VKRVE  275 (404)
T ss_pred             ceeec
Confidence            77653

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=98.58  E-value=2.5e-05  Score=75.65  Aligned_cols=181  Identities=13%  Similarity=0.101  Sum_probs=119.4

Q ss_pred             CCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCCEEEEEECCCeEEEEe-CCCcEEEEE-eCCC---C--
Q psy7057          48 KVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHS-EEGEFLKTL-TGHT---D--  120 (557)
Q Consensus        48 ~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd-~~~~~~~~l-~~h~---~--  120 (557)
                      .+..+++++.++.+..||..+|+.+..+.... .+.......++.++.++.++.++.+| .+|+.+... ....   .  
T Consensus        35 ~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~~~-~~~~~~~~~~~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~  113 (238)
T PF13360_consen   35 DGGRVYVASGDGNLYALDAKTGKVLWRFDLPG-PISGAPVVDGGRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVR  113 (238)
T ss_dssp             ETTEEEEEETTSEEEEEETTTSEEEEEEECSS-CGGSGEEEETTEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB
T ss_pred             eCCEEEEEcCCCEEEEEECCCCCEEEEeeccc-cccceeeecccccccccceeeeEecccCCcceeeeeccccccccccc
Confidence            46788888999999999999999888776422 21111233466777788999999999 888888774 3221   1  


Q ss_pred             CEEEEEEeCCCeEEEEECCCeEEEEECCCCeEEEEEeCCCCc-----------EEEEEEcCCEEEEEeCCCeEEEEECCC
Q psy7057         121 CVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNF-----------IYSVAAHGDLITSGGEDQCVCVYQNKA  189 (557)
Q Consensus       121 ~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~-----------V~~l~~~~~~l~s~s~Dg~I~iwd~~~  189 (557)
                      ......+. .+.++.+..++.|..+|+++|+.+.........           ...+.+.+..++.++.++.+..+|..+
T Consensus       114 ~~~~~~~~-~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~d~~t  192 (238)
T PF13360_consen  114 SSSSPAVD-GDRLYVGTSSGKLVALDPKTGKLLWKYPVGEPRGSSPISSFSDINGSPVISDGRVYVSSGDGRVVAVDLAT  192 (238)
T ss_dssp             --SEEEEE-TTEEEEEETCSEEEEEETTTTEEEEEEESSTT-SS--EEEETTEEEEEECCTTEEEEECCTSSEEEEETTT
T ss_pred             cccCceEe-cCEEEEEeccCcEEEEecCCCcEEEEeecCCCCCCcceeeecccccceEEECCEEEEEcCCCeEEEEECCC
Confidence            11222222 456778888999999999999998888764322           123333444777788787543339887


Q ss_pred             Cce-EeeCCccEEEEEEcCCCcEEEEEcCCcEEEEecCCCCc
Q psy7057         190 QNS-FMIPAMSVWAVAILPNSDIVTGSSDGIVRVFSANPDRQ  230 (557)
Q Consensus       190 ~~~-~~~~~~~v~~v~~~p~g~l~sg~~Dg~I~iwd~~~~~~  230 (557)
                      .+. .......+..+....++.+++++.++.|..||+.+++.
T Consensus       193 g~~~w~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~d~~tG~~  234 (238)
T PF13360_consen  193 GEKLWSKPISGIYSLPSVDGGTLYVTSSDGRLYALDLKTGKV  234 (238)
T ss_dssp             TEEEEEECSS-ECECEECCCTEEEEEETTTEEEEEETTTTEE
T ss_pred             CCEEEEecCCCccCCceeeCCEEEEEeCCCEEEEEECCCCCE
Confidence            743 32332333332333344477777999999999998764

...

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=98.56  E-value=2e-07  Score=62.97  Aligned_cols=38  Identities=32%  Similarity=0.584  Sum_probs=35.3

Q ss_pred             cEEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEc
Q psy7057           2 YKLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWK   39 (557)
Q Consensus         2 ~kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd   39 (557)
                      +++.+++++|.+.|++|+|+|++. |++++.|++|++||
T Consensus         1 g~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    1 GKCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             EEEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred             CeEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence            478999999999999999999987 88999999999996

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=98.53  E-value=8.2e-05  Score=76.77  Aligned_cols=213  Identities=14%  Similarity=0.214  Sum_probs=137.7

Q ss_pred             cEEEEEEcCCCc-EEEEEC----CCcEEEEcCCC--------------------CCCCCCCCEEEEEEC-CCeEEEEECC
Q psy7057          14 DVRSLSVTPDGC-ILSASR----DKSAKLWKPND--------------------LSPGAKVNTLLSASW-DMTAKLWCLE   67 (557)
Q Consensus        14 ~V~~l~~spdg~-l~sgs~----Dg~V~iWd~~~--------------------~~~~~~~~~l~sgs~-Dg~i~iwd~~   67 (557)
                      .-..|+++|+++ |.++..    ++.|..|++..                    ++.++++.+|+++.. +|+|.++++.
T Consensus        38 ~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~  117 (345)
T PF10282_consen   38 NPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCHIAVDPDGRFLYVANYGGGSVSVFPLD  117 (345)
T ss_dssp             SECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred             CCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcEEEEEecCCCEEEEEEccCCeEEEEEcc
Confidence            445678889888 555554    56888877653                    566788999998875 8999999998


Q ss_pred             C-CeEEEE---Ec----------ccCCcEEEEEEcCCC-EEEEE-ECCCeEEEEeCCC---cE--EEEEe-CCCCCEEEE
Q psy7057          68 S-QQCKLT---IR----------QHEMAVWGVIQLANG-IIVTG-CADKTIKLHSEEG---EF--LKTLT-GHTDCVRGL  125 (557)
Q Consensus        68 ~-~~~~~~---l~----------~h~~~V~~l~~~~~~-~l~sg-s~dg~I~vwd~~~---~~--~~~l~-~h~~~V~~l  125 (557)
                      . +.....   +.          .......++.++|++ .+++. -....|.+|+.+.   ..  ...+. ......+.+
T Consensus       118 ~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~  197 (345)
T PF10282_consen  118 DDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHL  197 (345)
T ss_dssp             TTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEE
T ss_pred             CCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCEEEEEEEeCCCceEEEeeccccccCCCCcEE
Confidence            7 443322   21          123457789999998 44443 3455788888322   22  22222 455678999


Q ss_pred             EEeCCCe--EEEEECCCeEEEEECC--CCe--EEEEEeCC------CCcEEEEEE--cCCEEEEEe-CCCeEEEEECCC-
Q psy7057         126 AVLNDTD--FVSCSNDASIRVWDST--TGK--CVHTMYGH------PNFIYSVAA--HGDLITSGG-EDQCVCVYQNKA-  189 (557)
Q Consensus       126 ~~~~~~~--lvs~s~Dg~I~vwd~~--~~~--~~~~~~~h------~~~V~~l~~--~~~~l~s~s-~Dg~I~iwd~~~-  189 (557)
                      .|+|++.  +++.-.+++|.++++.  +++  .+..+...      ......|.+  ++++|+++. ...+|.+|++.. 
T Consensus       198 ~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~  277 (345)
T PF10282_consen  198 AFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNRGSNSISVFDLDPA  277 (345)
T ss_dssp             EE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEECTT
T ss_pred             EEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEEeccCCEEEEEEEecC
Confidence            9999977  3466778999999987  443  33333321      124566666  688766554 677899999732 


Q ss_pred             ---C---ceEeeCCccEEEEEEcCCCc-EEEEE-cCCcEEEEecC
Q psy7057         190 ---Q---NSFMIPAMSVWAVAILPNSD-IVTGS-SDGIVRVFSAN  226 (557)
Q Consensus       190 ---~---~~~~~~~~~v~~v~~~p~g~-l~sg~-~Dg~I~iwd~~  226 (557)
                         .   ..+.......+.++++|+|+ ++++. .++.|.+|+++
T Consensus       278 ~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~d  322 (345)
T PF10282_consen  278 TGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQDSNTVSVFDID  322 (345)
T ss_dssp             TTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEETTTTEEEEEEEE
T ss_pred             CCceEEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCeEEEEEEe
Confidence               1   23333344589999999999 55555 57889999875

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>KOG3914|consensus

Probab=98.52  E-value=1e-06  Score=87.54  Aligned_cols=149  Identities=12%  Similarity=0.156  Sum_probs=101.1

Q ss_pred             CCCCCCCEEEEEECCCeEEEEECCCCeE----EEEEcccCCcEEEEEEcCCC-EEEE---EECCCeEEEEeCCCcEEEEE
Q psy7057          44 SPGAKVNTLLSASWDMTAKLWCLESQQC----KLTIRQHEMAVWGVIQLANG-IIVT---GCADKTIKLHSEEGEFLKTL  115 (557)
Q Consensus        44 ~~~~~~~~l~sgs~Dg~i~iwd~~~~~~----~~~l~~h~~~V~~l~~~~~~-~l~s---gs~dg~I~vwd~~~~~~~~l  115 (557)
                      ..++.+.+++.+..+....+++......    ..... -...-+++.+..+. .+..   .+....+.+|.....+...+
T Consensus        69 ~~s~~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~-v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~~~~~~~  147 (390)
T KOG3914|consen   69 LTSDSGRLVAVATSSKQRAVFDYRENPKGAKLLDVSC-VPKRPTAISFIREDTSVLVADKAGDVYSFDILSADSGRCEPI  147 (390)
T ss_pred             ccCCCceEEEEEeCCCceEEEEEecCCCcceeeeEee-cccCcceeeeeeccceEEEEeecCCceeeeeecccccCcchh
Confidence            3556788888888888877777654332    22221 12222333333322 2222   23334455555332344556


Q ss_pred             eCCCCCEEEEEEeCCCe-EEEEECCCeEEEEECCCCeEEEEE-eCCCCcEEEEEE-cCCEEEEEeCCCeEEEEECCCCce
Q psy7057         116 TGHTDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHTM-YGHPNFIYSVAA-HGDLITSGGEDQCVCVYQNKAQNS  192 (557)
Q Consensus       116 ~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~~~~~-~~h~~~V~~l~~-~~~~l~s~s~Dg~I~iwd~~~~~~  192 (557)
                      .||-+.+..++++||++ ++++..|..||+-....-..+..| .||+..|..++. ++..|+++|.|++|++||..+++.
T Consensus       148 lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~~~~LlS~sGD~tlr~Wd~~sgk~  227 (390)
T KOG3914|consen  148 LGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTDNYLLLSGSGDKTLRLWDITSGKL  227 (390)
T ss_pred             hhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeeeccCceeeecCCCCcEEEEecccCCc
Confidence            68999999999999987 669999999999887665555555 479999999999 677789999999999999887754


Q ss_pred             E
Q psy7057         193 F  193 (557)
Q Consensus       193 ~  193 (557)
                      +
T Consensus       228 L  228 (390)
T KOG3914|consen  228 L  228 (390)
T ss_pred             c
Confidence            4

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=98.52  E-value=6.3e-05  Score=72.88  Aligned_cols=210  Identities=14%  Similarity=0.123  Sum_probs=133.2

Q ss_pred             CCeEEEEECCCCeEEEEEccc--CCcEEEEEEcCCCEEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCeEE
Q psy7057          58 DMTAKLWCLESQQCKLTIRQH--EMAVWGVIQLANGIIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTDFV  134 (557)
Q Consensus        58 Dg~i~iwd~~~~~~~~~l~~h--~~~V~~l~~~~~~~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~lv  134 (557)
                      +++|..||+.+|+.+.....-  .....+.....++.+++++.++.+..|| .+|+.+..... ...+.......++.++
T Consensus         2 ~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~-~~~~~~~~~~~~~~v~   80 (238)
T PF13360_consen    2 DGTLSALDPRTGKELWSYDLGPGIGGPVATAVPDGGRVYVASGDGNLYALDAKTGKVLWRFDL-PGPISGAPVVDGGRVY   80 (238)
T ss_dssp             TSEEEEEETTTTEEEEEEECSSSCSSEEETEEEETTEEEEEETTSEEEEEETTTSEEEEEEEC-SSCGGSGEEEETTEEE
T ss_pred             CCEEEEEECCCCCEEEEEECCCCCCCccceEEEeCCEEEEEcCCCEEEEEECCCCCEEEEeec-cccccceeeecccccc
Confidence            688999999999988887531  2222222343566888889999999999 58888877764 2222221234467777


Q ss_pred             EEECCCeEEEEECCCCeEEEEE-eCCC-----CcEEEEEEcCCEEEEEeCCCeEEEEECCCCce---EeeCCcc------
Q psy7057         135 SCSNDASIRVWDSTTGKCVHTM-YGHP-----NFIYSVAAHGDLITSGGEDQCVCVYQNKAQNS---FMIPAMS------  199 (557)
Q Consensus       135 s~s~Dg~I~vwd~~~~~~~~~~-~~h~-----~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~~~~---~~~~~~~------  199 (557)
                      .++.++.|+.+|..+|+.+.+. ....     .......+.++.++.+..++.|..+|.++.+.   .......      
T Consensus        81 v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~  160 (238)
T PF13360_consen   81 VGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPVGEPRGSSPIS  160 (238)
T ss_dssp             EEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEESSTT-SS--EE
T ss_pred             cccceeeeEecccCCcceeeeeccccccccccccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeecCCCCCCccee
Confidence            7888899999999999998884 3221     12233444788899999999999999887733   2222211      


Q ss_pred             ----EEEEEEcCCCcEEEEEcCCc-EEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCCh
Q psy7057         200 ----VWAVAILPNSDIVTGSSDGI-VRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDR  274 (557)
Q Consensus       200 ----v~~v~~~p~g~l~sg~~Dg~-I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~~  274 (557)
                          +..-.+..++.++.++.++. +.+ |+.+++..  ....  ......+.. . ....++.++.||.|..||+.+++
T Consensus       161 ~~~~~~~~~~~~~~~v~~~~~~g~~~~~-d~~tg~~~--w~~~--~~~~~~~~~-~-~~~~l~~~~~~~~l~~~d~~tG~  233 (238)
T PF13360_consen  161 SFSDINGSPVISDGRVYVSSGDGRVVAV-DLATGEKL--WSKP--ISGIYSLPS-V-DGGTLYVTSSDGRLYALDLKTGK  233 (238)
T ss_dssp             EETTEEEEEECCTTEEEEECCTSSEEEE-ETTTTEEE--EEEC--SS-ECECEE-C-CCTEEEEEETTTEEEEEETTTTE
T ss_pred             eecccccceEEECCEEEEEcCCCeEEEE-ECCCCCEE--EEec--CCCccCCce-e-eCCEEEEEeCCCEEEEEECCCCC
Confidence                12333333456777777775 555 88887633  1111  111222111 2 22245556689999999998876


Q ss_pred             h
Q psy7057         275 Q  275 (557)
Q Consensus       275 ~  275 (557)
                      .
T Consensus       234 ~  234 (238)
T PF13360_consen  234 V  234 (238)
T ss_dssp             E
T ss_pred             E
Confidence            4

...

>KOG2315|consensus

Probab=98.52  E-value=1.4e-05  Score=82.67  Aligned_cols=211  Identities=12%  Similarity=0.137  Sum_probs=136.5

Q ss_pred             EEEEEcCCCcEEEEECCCcEEEEcCCC-----------------CCCCCCCCEEEE-----EECCCeEEEEECCCCeEEE
Q psy7057          16 RSLSVTPDGCILSASRDKSAKLWKPND-----------------LSPGAKVNTLLS-----ASWDMTAKLWCLESQQCKL   73 (557)
Q Consensus        16 ~~l~~spdg~l~sgs~Dg~V~iWd~~~-----------------~~~~~~~~~l~s-----gs~Dg~i~iwd~~~~~~~~   73 (557)
                      ++..|+.|..|++=-..+.+.+|+..+                 +++.+....+++     .+.-..||||.......-.
T Consensus       129 W~~qfs~dEsl~arlv~nev~f~~~~~f~~~~~kl~~~~i~~f~lSpgp~~~~vAvyvPe~kGaPa~vri~~~~~~~~~~  208 (566)
T KOG2315|consen  129 WVPQFSIDESLAARLVSNEVQFYDLGSFKTIQHKLSVSGITMLSLSPGPEPPFVAVYVPEKKGAPASVRIYKYPEEGQHQ  208 (566)
T ss_pred             cccccccchhhhhhhhcceEEEEecCCccceeeeeeccceeeEEecCCCCCceEEEEccCCCCCCcEEEEeccccccccc
Confidence            578888887765555567788888776                 455555555554     3455678888875221111


Q ss_pred             EE--cc-cCCcEEEEEEcCCC--EEEEEE--CC---------CeEEEEeCCCcEEEEEeCCCCCEEEEEEeCCCe-EE--
Q psy7057          74 TI--RQ-HEMAVWGVIQLANG--IIVTGC--AD---------KTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTD-FV--  134 (557)
Q Consensus        74 ~l--~~-h~~~V~~l~~~~~~--~l~sgs--~d---------g~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~~~-lv--  134 (557)
                      .+  +. ....-..+.|++.|  +|+.++  -|         .++++.+.+|.....--.-.++|.++.|+++++ |+  
T Consensus       209 ~~a~ksFFkadkvqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~s~~V~L~k~GPVhdv~W~~s~~EF~Vv  288 (566)
T KOG2315|consen  209 PVANKSFFKADKVQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGESVSVPLLKEGPVHDVTWSPSGREFAVV  288 (566)
T ss_pred             hhhhccccccceeEEEeccCCceEEEEEEEeecCCCccccccceEEEEEecCceEEEecCCCCCceEEEECCCCCEEEEE
Confidence            10  00 12222357788765  444333  33         357777766655444444578999999999975 54  


Q ss_pred             EEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeC---CCeEEEEECCCCceEeeCC-ccEEEEEEcCC
Q psy7057         135 SCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGE---DQCVCVYQNKAQNSFMIPA-MSVWAVAILPN  208 (557)
Q Consensus       135 s~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~---Dg~I~iwd~~~~~~~~~~~-~~v~~v~~~p~  208 (557)
                      -|-.=.++.|+|++ ++++..+.  .++-.++-|  +|++++.++-   -|.|-+||....+.+.... ...+-+.|+|+
T Consensus       289 yGfMPAkvtifnlr-~~~v~df~--egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~~a~~tt~~eW~Pd  365 (566)
T KOG2315|consen  289 YGFMPAKVTIFNLR-GKPVFDFP--EGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRKLIAKFKAANTTVFEWSPD  365 (566)
T ss_pred             EecccceEEEEcCC-CCEeEeCC--CCCccceEECCCCCEEEEeecCCCCCceEEEeccchhhccccccCCceEEEEcCC
Confidence            45566789999965 67766654  455566667  7787776664   4789999977664443332 23456789999


Q ss_pred             Cc-EEEEEc------CCcEEEEecCCCC
Q psy7057         209 SD-IVTGSS------DGIVRVFSANPDR  229 (557)
Q Consensus       209 g~-l~sg~~------Dg~I~iwd~~~~~  229 (557)
                      |+ |+++..      |+.++||+.....
T Consensus       366 Ge~flTATTaPRlrvdNg~KiwhytG~~  393 (566)
T KOG2315|consen  366 GEYFLTATTAPRLRVDNGIKIWHYTGSL  393 (566)
T ss_pred             CcEEEEEeccccEEecCCeEEEEecCce
Confidence            99 666654      7889999987543

>PRK01029 tolB translocation protein TolB; Provisional

Probab=98.52  E-value=1.5e-05  Score=84.54  Aligned_cols=200  Identities=14%  Similarity=-0.001  Sum_probs=118.8

Q ss_pred             eccCcccEEEEEEcCCCc---EE-EEECCCc--EEEEcCCC---------------CCCCCCCCEEEEEEC-----CCeE
Q psy7057           8 LYGHSMDVRSLSVTPDGC---IL-SASRDKS--AKLWKPND---------------LSPGAKVNTLLSASW-----DMTA   61 (557)
Q Consensus         8 l~gH~~~V~~l~~spdg~---l~-sgs~Dg~--V~iWd~~~---------------~~~~~~~~~l~sgs~-----Dg~i   61 (557)
                      |..+...+.+-+|+|||+   ++ +...+|.  |.+.++..               ..++|+++.|+..+.     +..+
T Consensus       180 lt~~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~lt~~~g~~~~p~wSPDG~~Laf~s~~~g~~di~~  259 (428)
T PRK01029        180 LTQEHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGKKILALQGNQLMPTFSPRKKLLAFISDRYGNPDLFI  259 (428)
T ss_pred             cccCCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCCceEeecCCCCccceEECCCCCEEEEEECCCCCcceeE
Confidence            444445566779999986   32 3444444  55556654               467889988887653     2234


Q ss_pred             EEEECCCC---eEEEEEcccCCcEEEEEEcCCC-EEEEEE-CCCeEEEEe--CC--CcEEEEEeCCCCCEEEEEEeCCCe
Q psy7057          62 KLWCLESQ---QCKLTIRQHEMAVWGVIQLANG-IIVTGC-ADKTIKLHS--EE--GEFLKTLTGHTDCVRGLAVLNDTD  132 (557)
Q Consensus        62 ~iwd~~~~---~~~~~l~~h~~~V~~l~~~~~~-~l~sgs-~dg~I~vwd--~~--~~~~~~l~~h~~~V~~l~~~~~~~  132 (557)
                      .+|++..+   +.......+.......+|+|+| .|+..+ .++...+|.  ..  +.....+..+...+....|+|+|+
T Consensus       260 ~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~~lt~~~~~~~~p~wSPDG~  339 (428)
T PRK01029        260 QSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPRLLTKKYRNSSCPAWSPDGK  339 (428)
T ss_pred             EEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcccccceEEeccCCCCccceeECCCCC
Confidence            45776652   3333333333345678999999 555554 567656654  32  333455555556778889999987


Q ss_pred             -EEEEECC---CeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEe-C--CCeEEEEECCCC--ceEeeCCccEE
Q psy7057         133 -FVSCSND---ASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGG-E--DQCVCVYQNKAQ--NSFMIPAMSVW  201 (557)
Q Consensus       133 -lvs~s~D---g~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s-~--Dg~I~iwd~~~~--~~~~~~~~~v~  201 (557)
                       |+..+.+   ..|.+||+.+++... +......+....|  +|+.|+..+ .  ...|+++++...  ..+......+.
T Consensus       340 ~Laf~~~~~g~~~I~v~dl~~g~~~~-Lt~~~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl~~g~~~~Lt~~~g~~~  418 (428)
T PRK01029        340 KIAFCSVIKGVRQICVYDLATGRDYQ-LTTSPENKESPSWAIDSLHLVYSAGNSNESELYLISLITKKTRKIVIGSGEKR  418 (428)
T ss_pred             EEEEEEcCCCCcEEEEEECCCCCeEE-ccCCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeecCCCccc
Confidence             5444332   469999998887643 3323344566667  677665433 2  346778886554  33433344456


Q ss_pred             EEEEcCC
Q psy7057         202 AVAILPN  208 (557)
Q Consensus       202 ~v~~~p~  208 (557)
                      ..+|+|-
T Consensus       419 ~p~Ws~~  425 (428)
T PRK01029        419 FPSWGAF  425 (428)
T ss_pred             CceecCC
Confidence            6667664

>PRK04792 tolB translocation protein TolB; Provisional

Probab=98.47  E-value=5.8e-05  Score=80.68  Aligned_cols=168  Identities=9%  Similarity=0.028  Sum_probs=101.6

Q ss_pred             eEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEEC-CC--eEEEEeCCCcEEEEEeCCCCCEEEEEEeCCCe-EE
Q psy7057          60 TAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCA-DK--TIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTD-FV  134 (557)
Q Consensus        60 ~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~-dg--~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~~~-lv  134 (557)
                      .+.++|...... ..+..+...+.+..|+|+| .|+..+. ++  .|.+||..+.....+...........|+|++. |+
T Consensus       199 ~l~i~d~dG~~~-~~l~~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~lt~~~g~~~~~~wSPDG~~La  277 (448)
T PRK04792        199 QLMIADYDGYNE-QMLLRSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREKVTSFPGINGAPRFSPDGKKLA  277 (448)
T ss_pred             EEEEEeCCCCCc-eEeecCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEEecCCCCCcCCeeECCCCCEEE
Confidence            566777655433 4455567788899999999 5555443 33  47788855443333433333445789999987 54


Q ss_pred             -EEECCCe--EEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEe-CCC--eEEEEECCCC--ceEeeCCccEEEEE
Q psy7057         135 -SCSNDAS--IRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGG-EDQ--CVCVYQNKAQ--NSFMIPAMSVWAVA  204 (557)
Q Consensus       135 -s~s~Dg~--I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s-~Dg--~I~iwd~~~~--~~~~~~~~~v~~v~  204 (557)
                       +.+.++.  |.++|+.+++. ..+..+.......+|  +++.|+..+ .++  .|+++++.+.  ..+..........+
T Consensus       278 ~~~~~~g~~~Iy~~dl~tg~~-~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~Lt~~g~~~~~~~  356 (448)
T PRK04792        278 LVLSKDGQPEIYVVDIATKAL-TRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSRLTFEGEQNLGGS  356 (448)
T ss_pred             EEEeCCCCeEEEEEECCCCCe-EECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEEecCCCCCcCee
Confidence             5566665  77788877764 344445555566667  677666544 344  4666676544  33332333344678


Q ss_pred             EcCCCc-EEEE-EcCCc--EEEEecCCCC
Q psy7057         205 ILPNSD-IVTG-SSDGI--VRVFSANPDR  229 (557)
Q Consensus       205 ~~p~g~-l~sg-~~Dg~--I~iwd~~~~~  229 (557)
                      |+|+|+ ++.. ..++.  |.++++.++.
T Consensus       357 ~SpDG~~l~~~~~~~g~~~I~~~dl~~g~  385 (448)
T PRK04792        357 ITPDGRSMIMVNRTNGKFNIARQDLETGA  385 (448)
T ss_pred             ECCCCCEEEEEEecCCceEEEEEECCCCC
Confidence            999998 4443 34454  4445666554

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=98.46  E-value=0.00011  Score=84.73  Aligned_cols=248  Identities=11%  Similarity=0.084  Sum_probs=154.9

Q ss_pred             cccEEEEEEcCCCc-EEEEECCCcEEEEcCCC------------------------------------------------
Q psy7057          12 SMDVRSLSVTPDGC-ILSASRDKSAKLWKPND------------------------------------------------   42 (557)
Q Consensus        12 ~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~------------------------------------------------   42 (557)
                      ...|.|++||||+. |+.+..++++.+-...-                                                
T Consensus       120 d~GI~a~~WSPD~Ella~vT~~~~l~~mt~~fd~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~  199 (928)
T PF04762_consen  120 DSGILAASWSPDEELLALVTGEGNLLLMTRDFDPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVP  199 (928)
T ss_pred             cCcEEEEEECCCcCEEEEEeCCCEEEEEeccceEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCC
Confidence            46899999999998 67777788887753221                                                


Q ss_pred             ---------------CCCCCCCCEEEEEEC---C---CeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEEC--
Q psy7057          43 ---------------LSPGAKVNTLLSASW---D---MTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCA--   98 (557)
Q Consensus        43 ---------------~~~~~~~~~l~sgs~---D---g~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~--   98 (557)
                                     ++|-.+|.++++.+.   .   +.+|||+-+ |....+-..-.+--.+++|.|.| +|++...  
T Consensus       200 ~~d~~~~s~dd~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~Re-G~L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~  278 (928)
T PF04762_consen  200 KVDEGKLSWDDGRVRISWRGDGEYFAVSSVEPETGSRRVIRVYSRE-GELQSTSEPVDGLEGALSWRPSGNLIASSQRLP  278 (928)
T ss_pred             ccccCccccCCCceEEEECCCCcEEEEEEEEcCCCceeEEEEECCC-ceEEeccccCCCccCCccCCCCCCEEEEEEEcC
Confidence                           235567788888774   2   578999854 66555444334444578999999 5555443  


Q ss_pred             -CCeEEEEeCCCcEEEEEe----CCCCCEEEEEEeCCCeEEEEECCCeEEEEECCCCe--EEEEEeC-CCCcEEEEEEc-
Q psy7057          99 -DKTIKLHSEEGEFLKTLT----GHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGK--CVHTMYG-HPNFIYSVAAH-  169 (557)
Q Consensus        99 -dg~I~vwd~~~~~~~~l~----~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~--~~~~~~~-h~~~V~~l~~~-  169 (557)
                       ...|.+|..+|-.-..+.    .....|..|.|++++.+++......|.+|-..+-.  ..+.+.- ....+..+.|+ 
T Consensus       279 ~~~~VvFfErNGLrhgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~~vqLWt~~NYHWYLKqei~~~~~~~~~~~~Wdp  358 (928)
T PF04762_consen  279 DRHDVVFFERNGLRHGEFTLRFDPEEEKVIELAWNSDSEILAVWLEDRVQLWTRSNYHWYLKQEIRFSSSESVNFVKWDP  358 (928)
T ss_pred             CCcEEEEEecCCcEeeeEecCCCCCCceeeEEEECCCCCEEEEEecCCceEEEeeCCEEEEEEEEEccCCCCCCceEECC
Confidence             356788876665544332    34568999999999886654445559999876643  3333332 23344458884 


Q ss_pred             --CCEEEEEeCCCeEEEEECCCCceEeeCCccEEEEEEcC----CCc-EEEEEcCCcEEEEecCCCCcchhHHH--hccc
Q psy7057         170 --GDLITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILP----NSD-IVTGSSDGIVRVFSANPDRQAEDAVQ--AQYA  240 (557)
Q Consensus       170 --~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~v~~v~~~p----~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~--~~~~  240 (557)
                        +..|...+.++.+..++.            .+.++.++    +.. ++..-...++++-.++.....+....  -...
T Consensus       359 e~p~~L~v~t~~g~~~~~~~------------~~~v~~s~~~~~~D~g~vaVIDG~~lllTpf~~a~VPPPMs~~~l~~~  426 (928)
T PF04762_consen  359 EKPLRLHVLTSNGQYEIYDF------------AWDVSRSPGSSPNDNGTVAVIDGNKLLLTPFRRAVVPPPMSSYELELP  426 (928)
T ss_pred             CCCCEEEEEecCCcEEEEEE------------EEEEEecCCCCccCceEEEEEeCCeEEEecccccCCCchHhceEEcCC
Confidence              446777777677766552            22233322    222 33333444577766665443322221  2234


Q ss_pred             ceeEEEeccCCCceeEEEEeCCCcEEEEecCCC
Q psy7057         241 EEVKKLKSANEQEIGGVKVSDDGIVRVFSANPD  273 (557)
Q Consensus       241 ~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~  273 (557)
                      ..+..+.+.+.... +++...||.|.+|.....
T Consensus       427 ~~v~~vaf~~~~~~-~avl~~d~~l~~~~~~~~  458 (928)
T PF04762_consen  427 SPVNDVAFSPSNSR-FAVLTSDGSLSIYEWDLK  458 (928)
T ss_pred             CCcEEEEEeCCCCe-EEEEECCCCEEEEEecCC
Confidence            56777777666554 788899999999986543

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=98.46  E-value=9.2e-05  Score=86.73  Aligned_cols=224  Identities=12%  Similarity=0.111  Sum_probs=140.6

Q ss_pred             CCEEEEEECCCeEEEEECCCCeEEEEEcc-c-------------CCcEEEEEEcCCC-EE-EEEECCCeEEEEeCCCcEE
Q psy7057          49 VNTLLSASWDMTAKLWCLESQQCKLTIRQ-H-------------EMAVWGVIQLANG-II-VTGCADKTIKLHSEEGEFL  112 (557)
Q Consensus        49 ~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~-h-------------~~~V~~l~~~~~~-~l-~sgs~dg~I~vwd~~~~~~  112 (557)
                      +..+++-+..+.|+++|... ..+..+.+ .             -.....+++.+++ .| ++-...+.|+++|..+..+
T Consensus       580 g~lyVaDs~n~rI~v~d~~G-~~i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaDt~n~~Ir~id~~~~~V  658 (1057)
T PLN02919        580 NRLFISDSNHNRIVVTDLDG-NFIVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNETV  658 (1057)
T ss_pred             CeEEEEECCCCeEEEEeCCC-CEEEEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEeCCCceEEEEecCCCEE
Confidence            44666667788899999754 44444332 1             1235778888865 44 4444567899999766666


Q ss_pred             EEEeCC-----------------CCCEEEEEEeC-CCe-EEEEECCCeEEEEECCCCeEEEEEeCC---------C----
Q psy7057         113 KTLTGH-----------------TDCVRGLAVLN-DTD-FVSCSNDASIRVWDSTTGKCVHTMYGH---------P----  160 (557)
Q Consensus       113 ~~l~~h-----------------~~~V~~l~~~~-~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h---------~----  160 (557)
                      .++.+-                 -...+.++++| ++. +++.+.++.|++||..++... .+.+.         .    
T Consensus       659 ~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~-~~~G~G~~~~~~g~~~~~~  737 (1057)
T PLN02919        659 RTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTR-VFSGDGYERNLNGSSGTST  737 (1057)
T ss_pred             EEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECCCCeEE-EEecCCccccCCCCccccc
Confidence            665321                 12346789998 455 557778899999998776542 22211         1    


Q ss_pred             --CcEEEEEE--cCC-EEEEEeCCCeEEEEECCCCc-eEeeC-----------------------CccEEEEEEcCCCc-
Q psy7057         161 --NFIYSVAA--HGD-LITSGGEDQCVCVYQNKAQN-SFMIP-----------------------AMSVWAVAILPNSD-  210 (557)
Q Consensus       161 --~~V~~l~~--~~~-~l~s~s~Dg~I~iwd~~~~~-~~~~~-----------------------~~~v~~v~~~p~g~-  210 (557)
                        .....|++  +++ ++++-+.++.|++||+.+.. .+...                       -.....+++.++|. 
T Consensus       738 ~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~L  817 (1057)
T PLN02919        738 SFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQI  817 (1057)
T ss_pred             cccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCcE
Confidence              12345666  555 55666778999999976542 11100                       01245889999998 


Q ss_pred             EEEEEcCCcEEEEecCCCCcchhHHH-----------hcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCChh
Q psy7057         211 IVTGSSDGIVRVFSANPDRQAEDAVQ-----------AQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQ  275 (557)
Q Consensus       211 l~sg~~Dg~I~iwd~~~~~~~~~~~~-----------~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~~~  275 (557)
                      +++-..+++|++||..+.........           .........+...+... .+|+-+.++.||+|++.+.+.
T Consensus       818 YVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~-lyVaDt~Nn~Irvid~~~~~~  892 (1057)
T PLN02919        818 YVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGR-LFVADTNNSLIRYLDLNKGEA  892 (1057)
T ss_pred             EEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCC-EEEEECCCCEEEEEECCCCcc
Confidence            66777789999999876654321111           01112344555555443 578888999999999987653

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=98.43  E-value=7.6e-05  Score=71.66  Aligned_cols=206  Identities=11%  Similarity=0.060  Sum_probs=122.9

Q ss_pred             EEEEcCCCcEEEEECCCcEEEEcCCC---------------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEE
Q psy7057          17 SLSVTPDGCILSASRDKSAKLWKPND---------------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTI   75 (557)
Q Consensus        17 ~l~~spdg~l~sgs~Dg~V~iWd~~~---------------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l   75 (557)
                      .++.+++|++++.-.|..|.|=..++                     +++++++..|+.+...|+|+++|+.. ..+..+
T Consensus         2 ~~~~~~~Gk~lAi~qd~~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g-~~lf~I   80 (282)
T PF15492_consen    2 HLALSSDGKLLAILQDQCIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLMG-SELFVI   80 (282)
T ss_pred             ceeecCCCcEEEEEeccEEEEEeccCCchheeEEEecCCCCCchheEEEECCCCcEEEEEcCCCeEEEEeccc-ceeEEc
Confidence            35677888888888888887775554                     78889999999999999999999865 334444


Q ss_pred             cc-------cCCcEEEEEEcCCC-------EEEEEECCCeEEEEeC------CCcEEEEE--eC-CCCCEEEEEEeCCCe
Q psy7057          76 RQ-------HEMAVWGVIQLANG-------IIVTGCADKTIKLHSE------EGEFLKTL--TG-HTDCVRGLAVLNDTD  132 (557)
Q Consensus        76 ~~-------h~~~V~~l~~~~~~-------~l~sgs~dg~I~vwd~------~~~~~~~l--~~-h~~~V~~l~~~~~~~  132 (557)
                      ..       -...|..+.|.+-.       .|+.-.-+|.++-+-.      .....+++  .. +...|.++.++|..+
T Consensus        81 ~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h~  160 (282)
T PF15492_consen   81 PPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGYQENHSFSFSSHYPHGINSAVYHPKHR  160 (282)
T ss_pred             CcccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCcceeeEEEEecccCCCceeEEEEcCCCC
Confidence            32       13567777776522       4666667777665542      11223333  22 467899999999866


Q ss_pred             -EEEEE-CCCeEEEEECCCCeEEEEEeCCCCcEEEEEE-c--CCE-EEEEeCCCe------EEEEECCCCceE---eeCC
Q psy7057         133 -FVSCS-NDASIRVWDSTTGKCVHTMYGHPNFIYSVAA-H--GDL-ITSGGEDQC------VCVYQNKAQNSF---MIPA  197 (557)
Q Consensus       133 -lvs~s-~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~-~--~~~-l~s~s~Dg~------I~iwd~~~~~~~---~~~~  197 (557)
                       |+.|+ ....-..+           +.....+++-.. +  +-+ .++..+|..      ..+|.+-..+.+   ....
T Consensus       161 LLlVgG~~~~~~~~s-----------~a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~~~~~~~~~~~~~~~~fs~~~~~~  229 (282)
T PF15492_consen  161 LLLVGGCEQNQDGMS-----------KASSCGLTAWRILSDSPYYKQVTSSEDDITASSKRRGLLRIPSFKFFSRQGQEQ  229 (282)
T ss_pred             EEEEeccCCCCCccc-----------cccccCceEEEEcCCCCcEEEccccCccccccccccceeeccceeeeeccccCC
Confidence             44444 32210000           011112222221 1  111 112222221      123332222111   2235


Q ss_pred             ccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhH
Q psy7057         198 MSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDA  234 (557)
Q Consensus       198 ~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~  234 (557)
                      ..|..++.+|+|. |++...+|.|.+|++.+-++....
T Consensus       230 d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~~~~~W  267 (282)
T PF15492_consen  230 DGIFKMSLSPDGSLLACIHFSGSLSLWEIPSLRLQRSW  267 (282)
T ss_pred             CceEEEEECCCCCEEEEEEcCCeEEEEecCcchhhccc
Confidence            6899999999999 889999999999999876655433

>KOG4190|consensus

Probab=98.43  E-value=2.5e-07  Score=94.47  Aligned_cols=160  Identities=17%  Similarity=0.284  Sum_probs=119.5

Q ss_pred             EEEEEcccCCcEEEEEEcCC-CEEEEEECCCeEEEEeC--------CCcEEEEEeCCCCCEEEEEEeCCCeEEEEECCCe
Q psy7057          71 CKLTIRQHEMAVWGVIQLAN-GIIVTGCADKTIKLHSE--------EGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDAS  141 (557)
Q Consensus        71 ~~~~l~~h~~~V~~l~~~~~-~~l~sgs~dg~I~vwd~--------~~~~~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~  141 (557)
                      .+..+.+|...|..++-..+ +.+++++.|+++++|..        +..+..++..|+.+|.++.|..+.+.+ +|.|+-
T Consensus       727 rL~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i-~ScD~g  805 (1034)
T KOG4190|consen  727 RLCNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSI-ASCDGG  805 (1034)
T ss_pred             eeecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeecccee-eeccCc
Confidence            45667899999988866554 48999999999999982        223667888999999999998876533 345789


Q ss_pred             EEEEECCCCeEEEEEeC---C--CCcEEEEEE-cCCEEE-EEeCCCeEEEEECCCC---ceE-----eeCCccEEEEEEc
Q psy7057         142 IRVWDSTTGKCVHTMYG---H--PNFIYSVAA-HGDLIT-SGGEDQCVCVYQNKAQ---NSF-----MIPAMSVWAVAIL  206 (557)
Q Consensus       142 I~vwd~~~~~~~~~~~~---h--~~~V~~l~~-~~~~l~-s~s~Dg~I~iwd~~~~---~~~-----~~~~~~v~~v~~~  206 (557)
                      |.+||.--++++..+..   |  .+.|.|+.- +...++ .|+...+|+++|.+.+   ..+     .++...++++++.
T Consensus       806 iHlWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R~iaVa  885 (1034)
T KOG4190|consen  806 IHLWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTRAIAVA  885 (1034)
T ss_pred             ceeecccccchhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEeccCCCCchheeEEEec
Confidence            99999877776654321   2  234445443 444444 4478899999998876   222     3455678999999


Q ss_pred             CCCc-EEEEEcCCcEEEEecCCCCcc
Q psy7057         207 PNSD-IVTGSSDGIVRVFSANPDRQA  231 (557)
Q Consensus       207 p~g~-l~sg~~Dg~I~iwd~~~~~~~  231 (557)
                      +.|. ++++-+.|+|.+.|.+++...
T Consensus       886 ~~GN~lAa~LSnGci~~LDaR~G~vI  911 (1034)
T KOG4190|consen  886 DKGNKLAAALSNGCIAILDARNGKVI  911 (1034)
T ss_pred             cCcchhhHHhcCCcEEEEecCCCcee
Confidence            9998 889999999999999888654

>KOG4714|consensus

Probab=98.42  E-value=1.4e-06  Score=81.79  Aligned_cols=179  Identities=12%  Similarity=0.113  Sum_probs=108.5

Q ss_pred             ccCcc-cEEEEEEcCCCcEEEEECCCcEEEEcCCC------------------C----------CCCCCCCEEEEEECCC
Q psy7057           9 YGHSM-DVRSLSVTPDGCILSASRDKSAKLWKPND------------------L----------SPGAKVNTLLSASWDM   59 (557)
Q Consensus         9 ~gH~~-~V~~l~~spdg~l~sgs~Dg~V~iWd~~~------------------~----------~~~~~~~~l~sgs~Dg   59 (557)
                      .+|.+ .|+.+.++-+..|+++..++.+.......                  +          ..+-.++.++++..||
T Consensus        32 ~~~~d~~~~~~~~v~~~~lf~~e~~~~~ss~g~~r~~~~~~~~rt~~i~~~~~~a~~sep~p~~~~s~~~t~V~~~~~dg  111 (319)
T KOG4714|consen   32 MQHADVKLSKVSLSAEYILFTGETSSQIISLGKGRGRCISLWERDDGIDPFKVLAKNSEIDPNDACTMTDNRVCIGYADG  111 (319)
T ss_pred             ccccceEEEEeechhhheeecccchhheeeeccceEEEechhhcccCcCceeeeeccCCCCCcccccccCCceEecCCCc
Confidence            34433 36666777666677777666555443322                  1          1112356799999999


Q ss_pred             eEEEEECCCCe-EEEEEcccCCcEEEEEEcCCCEEEEEECCCeEE------EEeCCCcEEEEEe---CCCCCEEEEEEeC
Q psy7057          60 TAKLWCLESQQ-CKLTIRQHEMAVWGVIQLANGIIVTGCADKTIK------LHSEEGEFLKTLT---GHTDCVRGLAVLN  129 (557)
Q Consensus        60 ~i~iwd~~~~~-~~~~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~------vwd~~~~~~~~l~---~h~~~V~~l~~~~  129 (557)
                      .+.+++.+.-. ....+......-.+.++...+.++....=|.++      .|+.  .++.++.   .--..|.+++-+|
T Consensus       112 ~~~v~s~~~~~~~~~~i~~~~~~~as~~~~~~~~~i~s~~~g~~n~~d~~~a~~~--~p~~t~~~~~~~~~~v~~l~~hp  189 (319)
T KOG4714|consen  112 SLAVFSTDKDLALMSRIPSIHSGSASRKICRHGNSILSGGCGNWNAQDNFYANTL--DPIKTLIPSKKALDAVTALCSHP  189 (319)
T ss_pred             eEEEEechHHHhhhhhcccccccccccceeecccEEecCCcceEeeccceeeecc--cccccccccccccccchhhhCCc
Confidence            99999876411 111111111111122223334344333334433      3332  2222221   1223499999988


Q ss_pred             CCe--EEEEECCCeEEEEECCCCe-EEEEEeCCCCcEEEEEE---cCCEEEEEeCCCeEEEEECCC
Q psy7057         130 DTD--FVSCSNDASIRVWDSTTGK-CVHTMYGHPNFIYSVAA---HGDLITSGGEDQCVCVYQNKA  189 (557)
Q Consensus       130 ~~~--lvs~s~Dg~I~vwd~~~~~-~~~~~~~h~~~V~~l~~---~~~~l~s~s~Dg~I~iwd~~~  189 (557)
                      ..+  +++|+.||.+-+||++... +...++.|+..++.+-|   +++.|+++++||.+..||..+
T Consensus       190 ~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wdas~  255 (319)
T KOG4714|consen  190 AQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDAST  255 (319)
T ss_pred             ccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEcCCC
Confidence            743  5689999999999998764 44556789999999999   567899999999999999654

>KOG4532|consensus

Probab=98.41  E-value=2.8e-05  Score=73.53  Aligned_cols=201  Identities=12%  Similarity=0.000  Sum_probs=131.9

Q ss_pred             EECCCcEEEEcCCC-----------C-----CCCCCCCEEEEEECCCeEEEEECCCCeEEE-EEcccCCcEEEEEEcCCC
Q psy7057          29 ASRDKSAKLWKPND-----------L-----SPGAKVNTLLSASWDMTAKLWCLESQQCKL-TIRQHEMAVWGVIQLANG   91 (557)
Q Consensus        29 gs~Dg~V~iWd~~~-----------~-----~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~-~l~~h~~~V~~l~~~~~~   91 (557)
                      .+....|.+|+...           +     ++...-.+|+.|+..|...+|.+.+.+... ....|...|.-+.-.-+.
T Consensus        48 i~~t~sv~i~~~y~N~~~iv~~y~g~~F~p~s~~~kc~~la~gG~~g~fd~~~~~tn~~h~~~cd~snn~v~~~~r~cd~  127 (344)
T KOG4532|consen   48 ISKTISVPINSHYSNPKGIVEFYTGMTFTPGSFINKCVTLADGGASGQFDLFACNTNDGHLYQCDVSNNDVTLVKRYCDL  127 (344)
T ss_pred             ccceeeeEeccccCCchhhEEeeecccccchHhhccccEEEeccccceeeeecccCcccceeeecccccchhhhhhhccc
Confidence            44555666776654           2     223345789999999999999998765332 233344433322211122


Q ss_pred             --EEEEEECCCeEEEEeCCCcEEEEEeCCCC--CEEEEEEeCCCeEE-EEECCCeEEEEECCCC-e-EEE-EEeCCCCcE
Q psy7057          92 --IIVTGCADKTIKLHSEEGEFLKTLTGHTD--CVRGLAVLNDTDFV-SCSNDASIRVWDSTTG-K-CVH-TMYGHPNFI  163 (557)
Q Consensus        92 --~l~sgs~dg~I~vwd~~~~~~~~l~~h~~--~V~~l~~~~~~~lv-s~s~Dg~I~vwd~~~~-~-~~~-~~~~h~~~V  163 (557)
                        .+..++.|.++++.++++...+... |..  .+.++++++++++. +.+....|..|.+... + .+. .....++.-
T Consensus       128 ~~~~~i~sndht~k~~~~~~~s~~~~~-h~~~~~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~g  206 (344)
T KOG4532|consen  128 KFPLNIASNDHTGKTMVVSGDSNKFAV-HNQNLTQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHG  206 (344)
T ss_pred             ccceeeccCCcceeEEEEecCccccee-eccccceeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCc
Confidence              5777889999999986655433322 333  37889999999865 6666677888887543 2 333 223334455


Q ss_pred             EEEEE--cCCEEEEEeCCCeEEEEECCCC--------ceEeeCCccEEEEEEcCCCc--EE-EEEcCCcEEEEecCCCCc
Q psy7057         164 YSVAA--HGDLITSGGEDQCVCVYQNKAQ--------NSFMIPAMSVWAVAILPNSD--IV-TGSSDGIVRVFSANPDRQ  230 (557)
Q Consensus       164 ~~l~~--~~~~l~s~s~Dg~I~iwd~~~~--------~~~~~~~~~v~~v~~~p~g~--l~-sg~~Dg~I~iwd~~~~~~  230 (557)
                      .+.+|  ....+++++.||++.|||.+..        .+-..|.+.++.+.|++.|.  |+ ..-.-+.+.+-|+++.+.
T Consensus       207 F~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~~  286 (344)
T KOG4532|consen  207 FYNSFSENDLQFAVVFQDGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYVN  286 (344)
T ss_pred             eeeeeccCcceEEEEecCCcEEEEEecccccchhhhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccCce
Confidence            66667  4558999999999999996644        23345888999999999775  44 444457789999887643

>KOG2695|consensus

Probab=98.40  E-value=9.9e-07  Score=85.86  Aligned_cols=138  Identities=19%  Similarity=0.302  Sum_probs=103.6

Q ss_pred             EEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcC-CCEEEEEECCCeEEEEeCC------CcEEEEEeCCCCCEEEE
Q psy7057          53 LSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLA-NGIIVTGCADKTIKLHSEE------GEFLKTLTGHTDCVRGL  125 (557)
Q Consensus        53 ~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~-~~~l~sgs~dg~I~vwd~~------~~~~~~l~~h~~~V~~l  125 (557)
                      ++.+.+-.|-+-+++++-. ..|. .+..|.++.|.. +.+++.|+.+|.|...|+.      +.+...+. |.+.|+++
T Consensus       228 fs~G~sqqv~L~nvetg~~-qsf~-sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rly-h~Ssvtsl  304 (425)
T KOG2695|consen  228 FSVGLSQQVLLTNVETGHQ-QSFQ-SKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRLY-HDSSVTSL  304 (425)
T ss_pred             ecccccceeEEEEeecccc-cccc-cchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEEE-cCcchhhh
Confidence            5556666777777777532 2233 566788888887 4499999999999999932      34555555 89999999


Q ss_pred             EEeC-CCe-EEEEECCCeEEEEECCCCeE---EEEEeCCCCcEEEEEE----cCCEEEEEeCCCeEEEEECCCCceE
Q psy7057         126 AVLN-DTD-FVSCSNDASIRVWDSTTGKC---VHTMYGHPNFIYSVAA----HGDLITSGGEDQCVCVYQNKAQNSF  193 (557)
Q Consensus       126 ~~~~-~~~-lvs~s~Dg~I~vwd~~~~~~---~~~~~~h~~~V~~l~~----~~~~l~s~s~Dg~I~iwd~~~~~~~  193 (557)
                      .... +++ |++.+.+|+|++||.+.-++   +.++.+|...-.-+-+    ....+++++.|...|||.++..+.+
T Consensus       305 q~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~~ghLl  381 (425)
T KOG2695|consen  305 QILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLDSGHLL  381 (425)
T ss_pred             hhhccccceEeeccCcCceeEeeehhhhcccceeeeecccccccccccccccccceEEEccCeeEEEEEecccCcee
Confidence            8876 444 77889999999999998777   8999999654433333    3457889999999999998876443

>KOG4714|consensus

Probab=98.38  E-value=2.4e-06  Score=80.31  Aligned_cols=127  Identities=17%  Similarity=0.210  Sum_probs=85.0

Q ss_pred             CCcEEEEECCCcEEEEcCCC-----------------CCCCCCCCEEEEEE-----CCCeEEEEECCCCeEEEEEcccCC
Q psy7057          23 DGCILSASRDKSAKLWKPND-----------------LSPGAKVNTLLSAS-----WDMTAKLWCLESQQCKLTIRQHEM   80 (557)
Q Consensus        23 dg~l~sgs~Dg~V~iWd~~~-----------------~~~~~~~~~l~sgs-----~Dg~i~iwd~~~~~~~~~l~~h~~   80 (557)
                      +..++++..||.+.+.+.+.                 .+....++.+.++.     .-+..+.|+++..+.+..-..-..
T Consensus       101 ~t~V~~~~~dg~~~v~s~~~~~~~~~~i~~~~~~~as~~~~~~~~~i~s~~~g~~n~~d~~~a~~~~p~~t~~~~~~~~~  180 (319)
T KOG4714|consen  101 DNRVCIGYADGSLAVFSTDKDLALMSRIPSIHSGSASRKICRHGNSILSGGCGNWNAQDNFYANTLDPIKTLIPSKKALD  180 (319)
T ss_pred             CCceEecCCCceEEEEechHHHhhhhhcccccccccccceeecccEEecCCcceEeeccceeeecccccccccccccccc
Confidence            34589999999999998766                 11112233333321     112344454433221111111233


Q ss_pred             cEEEEEEcCCC--EEEEEECCCeEEEEeCC--CcEEEEEeCCCCCEEEEEEeCCC--eEEEEECCCeEEEEECCC
Q psy7057          81 AVWGVIQLANG--IIVTGCADKTIKLHSEE--GEFLKTLTGHTDCVRGLAVLNDT--DFVSCSNDASIRVWDSTT  149 (557)
Q Consensus        81 ~V~~l~~~~~~--~l~sgs~dg~I~vwd~~--~~~~~~l~~h~~~V~~l~~~~~~--~lvs~s~Dg~I~vwd~~~  149 (557)
                      .|.+++-.|..  ++++|+.||.+.+||..  ..+...++.|+.+++.+.|+|..  .|+++++||.+-.||..+
T Consensus       181 ~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wdas~  255 (319)
T KOG4714|consen  181 AVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDAST  255 (319)
T ss_pred             cchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEcCCC
Confidence            48888888844  89999999999999932  34566778999999999999973  499999999999999653

>KOG4532|consensus

Probab=98.36  E-value=7.1e-05  Score=70.87  Aligned_cols=167  Identities=13%  Similarity=0.045  Sum_probs=114.7

Q ss_pred             CcEEEEECCCcEEEEcCCC-------CCCC-----------CCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEE
Q psy7057          24 GCILSASRDKSAKLWKPND-------LSPG-----------AKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGV   85 (557)
Q Consensus        24 g~l~sgs~Dg~V~iWd~~~-------~~~~-----------~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l   85 (557)
                      +.|+.|+..|...+|...+       +..+           .....+..++.|.++++.+++.+.....+.-..-.+.++
T Consensus        85 ~~la~gG~~g~fd~~~~~tn~~h~~~cd~snn~v~~~~r~cd~~~~~~i~sndht~k~~~~~~~s~~~~~h~~~~~~ns~  164 (344)
T KOG4532|consen   85 VTLADGGASGQFDLFACNTNDGHLYQCDVSNNDVTLVKRYCDLKFPLNIASNDHTGKTMVVSGDSNKFAVHNQNLTQNSL  164 (344)
T ss_pred             cEEEeccccceeeeecccCcccceeeecccccchhhhhhhcccccceeeccCCcceeEEEEecCcccceeeccccceeee
Confidence            3488899999999999875       1111           112357788999999999887654332221112338889


Q ss_pred             EEcCCC-EEEEEECCCeEEEEeC--CCcEE-E-EEeCCCCCEEEEEEeCCC-eEEEEECCCeEEEEECCCCe-EEEE---
Q psy7057          86 IQLANG-IIVTGCADKTIKLHSE--EGEFL-K-TLTGHTDCVRGLAVLNDT-DFVSCSNDASIRVWDSTTGK-CVHT---  155 (557)
Q Consensus        86 ~~~~~~-~l~sgs~dg~I~vwd~--~~~~~-~-~l~~h~~~V~~l~~~~~~-~lvs~s~Dg~I~vwd~~~~~-~~~~---  155 (557)
                      ++++++ .+++.+....|..|.+  +++.+ . .....++.-.+..|+... .|++++.||++.|||++... +..+   
T Consensus       165 ~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~ss  244 (344)
T KOG4532|consen  165 HYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMATPMAEISS  244 (344)
T ss_pred             EEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCcceEEEEecCCcEEEEEecccccchhhhcc
Confidence            999999 7777788888888873  33332 2 233445556777887664 48999999999999998643 2222   


Q ss_pred             -EeCCCCcEEEEEEc--C--CEEEEEeCCCeEEEEECCCC
Q psy7057         156 -MYGHPNFIYSVAAH--G--DLITSGGEDQCVCVYQNKAQ  190 (557)
Q Consensus       156 -~~~h~~~V~~l~~~--~--~~l~s~s~Dg~I~iwd~~~~  190 (557)
                       -..|.+.++.+.|.  |  ++|+..-.-+.+.+.|++..
T Consensus       245 trp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~  284 (344)
T KOG4532|consen  245 TRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNY  284 (344)
T ss_pred             cCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccC
Confidence             23588999999983  2  35666656678999998776

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=98.34  E-value=0.00016  Score=76.15  Aligned_cols=241  Identities=12%  Similarity=0.065  Sum_probs=145.3

Q ss_pred             CCcEEEEECCCcEEEEcCCC--C------------CCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEE-EEE
Q psy7057          23 DGCILSASRDKSAKLWKPND--L------------SPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWG-VIQ   87 (557)
Q Consensus        23 dg~l~sgs~Dg~V~iWd~~~--~------------~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~-l~~   87 (557)
                      +++++.++.++.+.-+|..+  .            ++.-.+..++.++.++.+..+|.++|+.+..+......... ...
T Consensus       120 ~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~ssP~v~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~  199 (394)
T PRK11138        120 GGKVYIGSEKGQVYALNAEDGEVAWQTKVAGEALSRPVVSDGLVLVHTSNGMLQALNESDGAVKWTVNLDVPSLTLRGES  199 (394)
T ss_pred             CCEEEEEcCCCEEEEEECCCCCCcccccCCCceecCCEEECCEEEEECCCCEEEEEEccCCCEeeeecCCCCcccccCCC
Confidence            34577788889999988866  0            11112456788888999999999999988877543111100 001


Q ss_pred             cC---CCEEEEEECCCeEEEEe-CCCcEEEEEeCCC----C---CEEEEEEe---CCCeEEEEECCCeEEEEECCCCeEE
Q psy7057          88 LA---NGIIVTGCADKTIKLHS-EEGEFLKTLTGHT----D---CVRGLAVL---NDTDFVSCSNDASIRVWDSTTGKCV  153 (557)
Q Consensus        88 ~~---~~~l~sgs~dg~I~vwd-~~~~~~~~l~~h~----~---~V~~l~~~---~~~~lvs~s~Dg~I~vwd~~~~~~~  153 (557)
                      +|   ++.++.++.++.+...| .+|+.+.......    .   ....+..+   .++.++.++.++.+..+|..+|+.+
T Consensus       200 sP~v~~~~v~~~~~~g~v~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~ald~~tG~~~  279 (394)
T PRK11138        200 APATAFGGAIVGGDNGRVSAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLVALDLRSGQIV  279 (394)
T ss_pred             CCEEECCEEEEEcCCCEEEEEEccCChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEEEEECCCCCEE
Confidence            11   45677788889888887 5565544432100    0   01111111   2466777888999999999999877


Q ss_pred             EEEeCCCCcEEEEEEcCCEEEEEeCCCeEEEEECCCCceEeeCC---cc-EEEEEEcCCCcEEEEEcCCcEEEEecCCCC
Q psy7057         154 HTMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQNSFMIPA---MS-VWAVAILPNSDIVTGSSDGIVRVFSANPDR  229 (557)
Q Consensus       154 ~~~~~h~~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~---~~-v~~v~~~p~g~l~sg~~Dg~I~iwd~~~~~  229 (557)
                      -+..-  .....+...+..++.++.++.+..+|..+...+-...   .. ..+..+ -++.++.++.||.|++.|..+++
T Consensus       280 W~~~~--~~~~~~~~~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~sp~v-~~g~l~v~~~~G~l~~ld~~tG~  356 (394)
T PRK11138        280 WKREY--GSVNDFAVDGGRIYLVDQNDRVYALDTRGGVELWSQSDLLHRLLTAPVL-YNGYLVVGDSEGYLHWINREDGR  356 (394)
T ss_pred             EeecC--CCccCcEEECCEEEEEcCCCeEEEEECCCCcEEEcccccCCCcccCCEE-ECCEEEEEeCCCEEEEEECCCCC
Confidence            65432  1222344567788888899999999977663322111   11 112222 25668899999999999998876


Q ss_pred             cchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEec
Q psy7057         230 QAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSA  270 (557)
Q Consensus       230 ~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~  270 (557)
                      ..-.....  ...+..-....  ...++.++.||.|..+++
T Consensus       357 ~~~~~~~~--~~~~~s~P~~~--~~~l~v~t~~G~l~~~~~  393 (394)
T PRK11138        357 FVAQQKVD--SSGFLSEPVVA--DDKLLIQARDGTVYAITR  393 (394)
T ss_pred             EEEEEEcC--CCcceeCCEEE--CCEEEEEeCCceEEEEeC
Confidence            54322111  01111111111  224677899999888764

>KOG2041|consensus

Probab=98.34  E-value=9.6e-06  Score=85.63  Aligned_cols=216  Identities=12%  Similarity=0.130  Sum_probs=141.2

Q ss_pred             EEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC------------------CCCCCCCCEEEEEECCCeEEE
Q psy7057           3 KLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND------------------LSPGAKVNTLLSASWDMTAKL   63 (557)
Q Consensus         3 kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~------------------~~~~~~~~~l~sgs~Dg~i~i   63 (557)
                      .+-++|.||.+.|.-+.|+.+.+ |-|...+|.|.+|-+..                  ++|+.+|..|+..-.||.|.+
T Consensus        62 smNQtLeGH~~sV~vvTWNe~~QKLTtSDt~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIV  141 (1189)
T KOG2041|consen   62 SMNQTLEGHNASVMVVTWNENNQKLTTSDTSGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIV  141 (1189)
T ss_pred             chhhhhccCcceEEEEEeccccccccccCCCceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEE
Confidence            34578999999999999998876 88889999999997755                  788889999999999998888


Q ss_pred             EECCCCeEE-EEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcEEEEE------------eCCCCCEEEEEEe-
Q psy7057          64 WCLESQQCK-LTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFLKTL------------TGHTDCVRGLAVL-  128 (557)
Q Consensus        64 wd~~~~~~~-~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~~~l------------~~h~~~V~~l~~~-  128 (557)
                      =.++..+.- ..+++  .-...+.|+++. .++.+-..|.+.++|..|.....+            ......|-.+.|. 
T Consensus       142 GsvdGNRIwgKeLkg--~~l~hv~ws~D~~~~Lf~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~  219 (1189)
T KOG2041|consen  142 GSVDGNRIWGKELKG--QLLAHVLWSEDLEQALFKKANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNT  219 (1189)
T ss_pred             Eeeccceecchhcch--heccceeecccHHHHHhhhcCCcEEEecccccHHHhhhhceEEeeeeeecCCCccccceeecc
Confidence            776543321 11222  223467899988 777788889999999655432211            1122335566663 


Q ss_pred             -------CC-CeEEEEECCCeEEEEECCC-CeEEEEEeCCCCcEEEEEE--cCCEEEEEeCC---------CeEEEEEC-
Q psy7057         129 -------ND-TDFVSCSNDASIRVWDSTT-GKCVHTMYGHPNFIYSVAA--HGDLITSGGED---------QCVCVYQN-  187 (557)
Q Consensus       129 -------~~-~~lvs~s~Dg~I~vwd~~~-~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~D---------g~I~iwd~-  187 (557)
                             |+ ..|+.|-..|.+.+-.-.+ ..++..-  ..-.+....|  +|..|+.|+.+         ..|.+|.. 
T Consensus       220 g~~~~v~pdrP~lavcy~nGr~QiMR~eND~~Pvv~d--tgm~~vgakWnh~G~vLAvcG~~~da~~~~d~n~v~Fysp~  297 (1189)
T KOG2041|consen  220 GPYQPVPPDRPRLAVCYANGRMQIMRSENDPEPVVVD--TGMKIVGAKWNHNGAVLAVCGNDSDADEPTDSNKVHFYSPY  297 (1189)
T ss_pred             CccccCCCCCCEEEEEEcCceehhhhhcCCCCCeEEe--cccEeecceecCCCcEEEEccCcccccCccccceEEEeccc
Confidence                   23 3478888888887764322 2222211  2244555666  56677777654         35677762 


Q ss_pred             CCC-ceEeeCCccEEEEEEcCCCcEEEEEcCCcEEE
Q psy7057         188 KAQ-NSFMIPAMSVWAVAILPNSDIVTGSSDGIVRV  222 (557)
Q Consensus       188 ~~~-~~~~~~~~~v~~v~~~p~g~l~sg~~Dg~I~i  222 (557)
                      +.. .+++.+...|++++|-..|--++-.-|+.|++
T Consensus       298 G~i~gtlkvpg~~It~lsWEg~gLriA~Avdsfiyf  333 (1189)
T KOG2041|consen  298 GHIVGTLKVPGSCITGLSWEGTGLRIAIAVDSFIYF  333 (1189)
T ss_pred             hhheEEEecCCceeeeeEEcCCceEEEEEecceEEE
Confidence            322 77778888888888876664222233444443

>KOG1912|consensus

Probab=98.31  E-value=3.2e-05  Score=82.64  Aligned_cols=212  Identities=13%  Similarity=0.090  Sum_probs=145.4

Q ss_pred             CeEEEEECCCCeEEEEEcccCCcEEEEEEcCC-----------C--EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEE
Q psy7057          59 MTAKLWCLESQQCKLTIRQHEMAVWGVIQLAN-----------G--IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRG  124 (557)
Q Consensus        59 g~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~-----------~--~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~  124 (557)
                      ..|.+.|..+.+.+.++..|...|+.+.|.|.           .  +|+++...|.|.+|| ..+..+..+..|.+++..
T Consensus        35 slV~VVDs~s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~~~s~~~~l~~~~~~~qd  114 (1062)
T KOG1912|consen   35 SLVSVVDSRSLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFVLASVINWLSHSNDSVQD  114 (1062)
T ss_pred             ceEEEEehhhhhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEehhhhhhhhhcCCCcchhh
Confidence            35677788888889999999999999999871           1  577888889999999 556667788889999999


Q ss_pred             EEEeCC---Ce--EEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE---cCCEEEEEeCCCeEEEEEC-C--CC---
Q psy7057         125 LAVLND---TD--FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA---HGDLITSGGEDQCVCVYQN-K--AQ---  190 (557)
Q Consensus       125 l~~~~~---~~--lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~---~~~~l~s~s~Dg~I~iwd~-~--~~---  190 (557)
                      ++|.+.   .+  +++-....+|.+|+..+|+.............|+.+   +.+.+..-+..|.+.+-+. .  +.   
T Consensus       115 l~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ys~~iLs~f~~DPfd~rh~~~l~s~g~vl~~~~l~~sep~~p  194 (1062)
T KOG1912|consen  115 LCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDYSHEILSCFRVDPFDSRHFCVLGSKGFVLSCKDLGLSEPDVP  194 (1062)
T ss_pred             eeeeeccCcchheeEEecCCcEEEEEEccCCceeeccccCCcceeeeeeCCCCcceEEEEccCceEEEEeccCCCCCCCC
Confidence            999754   32  567777789999999999988877655666667776   5566666666777766651 1  11   


Q ss_pred             -ceEee---CCc-------------------------cEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHhccc
Q psy7057         191 -NSFMI---PAM-------------------------SVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYA  240 (557)
Q Consensus       191 -~~~~~---~~~-------------------------~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~  240 (557)
                       +.++.   |..                         ..-.++|+|.-+ ++-..-.+.+.|+|++-+..........  
T Consensus       195 gk~~qI~sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~faf~p~~rn~lfi~~prellv~dle~~~~l~vvpier--  272 (1062)
T KOG1912|consen  195 GKEFQITSDHSDLAHLERETATGNSTTSTPASAYFITYCAQFAFSPHWRNILFITFPRELLVFDLEYECCLAVVPIER--  272 (1062)
T ss_pred             ceeEEEecCccchhhhhhhhhccccccCCCcchhHHHHHHhhhcChhhhceEEEEeccceEEEcchhhceeEEEEecc--
Confidence             22211   111                         012356788766 6666677789999987665443222221  


Q ss_pred             ceeEEEeccCC-CceeEEEEeCCCcEEEEecCC
Q psy7057         241 EEVKKLKSANE-QEIGGVKVSDDGIVRVFSANP  272 (557)
Q Consensus       241 ~~v~~l~~~~~-~~~~~vs~s~DG~IrvW~~~~  272 (557)
                      +.+..+...|+ ....+.+.-.||.+.+|-...
T Consensus       273 ~~akfv~vlP~~~rd~LfclH~nG~ltirvrk~  305 (1062)
T KOG1912|consen  273 GGAKFVDVLPDPRRDALFCLHSNGRLTIRVRKE  305 (1062)
T ss_pred             CCcceeEeccCCCcceEEEEecCCeEEEEEeec
Confidence            22223333333 334678889999999998665

>KOG2314|consensus

Probab=98.31  E-value=0.00032  Score=72.60  Aligned_cols=257  Identities=12%  Similarity=0.146  Sum_probs=155.9

Q ss_pred             EEEEEcCCCcEEEEECCCcEEEEcCCC--------------CCCCCCCCEEEEEECC-----------CeEEEEECCCCe
Q psy7057          16 RSLSVTPDGCILSASRDKSAKLWKPND--------------LSPGAKVNTLLSASWD-----------MTAKLWCLESQQ   70 (557)
Q Consensus        16 ~~l~~spdg~l~sgs~Dg~V~iWd~~~--------------~~~~~~~~~l~sgs~D-----------g~i~iwd~~~~~   70 (557)
                      +-+.|||-|..++.-.-.-|.+|--.+              +.++|...+|+|-+..           ..++|||+.+|.
T Consensus       214 tyv~wSP~GTYL~t~Hk~GI~lWGG~~f~r~~RF~Hp~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~tG~  293 (698)
T KOG2314|consen  214 TYVRWSPKGTYLVTFHKQGIALWGGESFDRIQRFYHPGVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIATGL  293 (698)
T ss_pred             eeEEecCCceEEEEEeccceeeecCccHHHHHhccCCCceeeecCCccceEEEecCCccccCcccCCCceEEEEEccccc
Confidence            457899999955555556688885444              6788889999997642           578999999999


Q ss_pred             EEEEEcc--cCCcEEE-EEEcCCCEEEEEECCCeEEEEeCCC-cEEEEEeCCCCCEEEEEEeCCCeEEE---EECC---C
Q psy7057          71 CKLTIRQ--HEMAVWG-VIQLANGIIVTGCADKTIKLHSEEG-EFLKTLTGHTDCVRGLAVLNDTDFVS---CSND---A  140 (557)
Q Consensus        71 ~~~~l~~--h~~~V~~-l~~~~~~~l~sgs~dg~I~vwd~~~-~~~~~l~~h~~~V~~l~~~~~~~lvs---~s~D---g  140 (557)
                      ..+.+..  ....++. ..|+.++..++.-.-..|.|++... .++..-.-.-..|....|+|.+.+++   -..+   .
T Consensus       294 lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~~sisIyEtpsf~lld~Kslki~gIr~FswsP~~~llAYwtpe~~~~pa  373 (698)
T KOG2314|consen  294 LKRSFPVIKSPYLKWPIFRWSHDDKYFARMTGNSISIYETPSFMLLDKKSLKISGIRDFSWSPTSNLLAYWTPETNNIPA  373 (698)
T ss_pred             hhcceeccCCCccccceEEeccCCceeEEeccceEEEEecCceeeecccccCCccccCcccCCCcceEEEEcccccCCcc
Confidence            8888765  3334444 4788888544444457889997332 22111112346788899999876442   1111   3


Q ss_pred             eEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEe----------CCCeEEEEECCCC---ceEeeCCccEEEEEE
Q psy7057         141 SIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGG----------EDQCVCVYQNKAQ---NSFMIPAMSVWAVAI  205 (557)
Q Consensus       141 ~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s----------~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~  205 (557)
                      .+.+-.+.+++.+++-.-|.-.=..|-|  +|++|..--          .-..+.|+.++..   .........|...+|
T Consensus       374 rvtL~evPs~~~iRt~nlfnVsDckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfrireKdIpve~velke~vi~FaW  453 (698)
T KOG2314|consen  374 RVTLMEVPSKREIRTKNLFNVSDCKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIREKDIPVEVVELKESVIAFAW  453 (698)
T ss_pred             eEEEEecCccceeeeccceeeeccEEEeccCCcEEEEEEEeeccccccceEeeEEEEEeeccCCCceeeecchheeeeee
Confidence            4566666666666654433333233444  555544321          1123455555443   222234557889999


Q ss_pred             cCCCc-EE--EEEc-CCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEE--EeCCCcEEEEecCC
Q psy7057         206 LPNSD-IV--TGSS-DGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVK--VSDDGIVRVFSANP  272 (557)
Q Consensus       206 ~p~g~-l~--sg~~-Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs--~s~DG~IrvW~~~~  272 (557)
                      -|.|. ++  +|-. ..++++|.+++..........--......+.+.|..+...+.  +|.-|.+.++|.+-
T Consensus       454 EP~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~lVk~~dk~~~N~vfwsPkG~fvvva~l~s~~g~l~F~D~~~  526 (698)
T KOG2314|consen  454 EPHGDKFAVISGNTVKNTVSFYAVETNIKKPSLVKELDKKFANTVFWSPKGRFVVVAALVSRRGDLEFYDTDY  526 (698)
T ss_pred             ccCCCeEEEEEccccccceeEEEeecCCCchhhhhhhcccccceEEEcCCCcEEEEEEecccccceEEEecch
Confidence            99998 43  3322 467899988743222222222222445667777877765543  36789999999773

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=98.29  E-value=0.00081  Score=68.64  Aligned_cols=225  Identities=14%  Similarity=0.139  Sum_probs=128.3

Q ss_pred             EEEEEeccCcccEEEEEEcCCCc-EE-EEE---------CCCcEEEEcCCC-----------------------CCCCCC
Q psy7057           3 KLSTALYGHSMDVRSLSVTPDGC-IL-SAS---------RDKSAKLWKPND-----------------------LSPGAK   48 (557)
Q Consensus         3 kl~~~l~gH~~~V~~l~~spdg~-l~-sgs---------~Dg~V~iWd~~~-----------------------~~~~~~   48 (557)
                      ++..++..-..+- .+ ++|||+ |+ +.+         .+..|.+||..+                       +..+++
T Consensus        38 ~v~g~i~~G~~P~-~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~~~~~~~~ls~d  115 (352)
T TIGR02658        38 RVLGMTDGGFLPN-PV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVGTYPWMTSLTPD  115 (352)
T ss_pred             EEEEEEEccCCCc-ee-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhccCccceEEECCC
Confidence            4444454322222 24 899998 54 455         689999999987                       345667


Q ss_pred             CCEEEEEE-C-CCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCCEEEEEECCCeEEEEe--CCCcEE-EE---EeCCCC
Q psy7057          49 VNTLLSAS-W-DMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHS--EEGEFL-KT---LTGHTD  120 (557)
Q Consensus        49 ~~~l~sgs-~-Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd--~~~~~~-~~---l~~h~~  120 (557)
                      +++|+... . +..|.+.|+.+++.+..+.--. ...-...++.. ...-+.||......  .+++.. ..   +.+-..
T Consensus       116 gk~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp~-~~~vy~t~e~~-~~~~~~Dg~~~~v~~d~~g~~~~~~~~vf~~~~~  193 (352)
T TIGR02658       116 NKTLLFYQFSPSPAVGVVDLEGKAFVRMMDVPD-CYHIFPTANDT-FFMHCRDGSLAKVGYGTKGNPKIKPTEVFHPEDE  193 (352)
T ss_pred             CCEEEEecCCCCCEEEEEECCCCcEEEEEeCCC-CcEEEEecCCc-cEEEeecCceEEEEecCCCceEEeeeeeecCCcc
Confidence            78887766 3 6888999999988887776422 22222222222 22334455544322  233311 11   111001


Q ss_pred             CEEEE-EEeC-CCeEEEEECCCeEEEEECCCC-----eEEEEEeC-------CCCcEEEEEE--cCCEEEEEe-------
Q psy7057         121 CVRGL-AVLN-DTDFVSCSNDASIRVWDSTTG-----KCVHTMYG-------HPNFIYSVAA--HGDLITSGG-------  177 (557)
Q Consensus       121 ~V~~l-~~~~-~~~lvs~s~Dg~I~vwd~~~~-----~~~~~~~~-------h~~~V~~l~~--~~~~l~s~s-------  177 (557)
                      ++..= .+.+ ++..+-.+..|+|.+.|+...     +....+..       ..+.+.-+++  +++.++...       
T Consensus       194 ~v~~rP~~~~~dg~~~~vs~eG~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~t  273 (352)
T TIGR02658       194 YLINHPAYSNKSGRLVWPTYTGKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWT  273 (352)
T ss_pred             ccccCCceEcCCCcEEEEecCCeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCCCCEEEEEecCCcccc
Confidence            10000 2344 666554444599999996432     23332211       2233334666  566666532       


Q ss_pred             ---CCCeEEEEECCCCceEe--eCCccEEEEEEcCCCc-E-E-EEEcCCcEEEEecCCCCcc
Q psy7057         178 ---EDQCVCVYQNKAQNSFM--IPAMSVWAVAILPNSD-I-V-TGSSDGIVRVFSANPDRQA  231 (557)
Q Consensus       178 ---~Dg~I~iwd~~~~~~~~--~~~~~v~~v~~~p~g~-l-~-sg~~Dg~I~iwd~~~~~~~  231 (557)
                         ..+.|.++|..+.+.+.  .....++.++++|+++ + + +...++.|.++|..+.+..
T Consensus       274 hk~~~~~V~ViD~~t~kvi~~i~vG~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~t~k~i  335 (352)
T TIGR02658       274 HKTASRFLFVVDAKTGKRLRKIELGHEIDSINVSQDAKPLLYALSTGDKTLYIFDAETGKEL  335 (352)
T ss_pred             ccCCCCEEEEEECCCCeEEEEEeCCCceeeEEECCCCCeEEEEeCCCCCcEEEEECcCCeEE
Confidence               22579999988774333  2356899999999998 3 3 4446889999999887654

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=98.29  E-value=8.6e-05  Score=76.06  Aligned_cols=216  Identities=13%  Similarity=0.126  Sum_probs=141.3

Q ss_pred             CcccEEEEEEcCCCcEEEEECCCcEEEEcCCC--------------CCCCCCCCEEEEEECCCe---------------E
Q psy7057          11 HSMDVRSLSVTPDGCILSASRDKSAKLWKPND--------------LSPGAKVNTLLSASWDMT---------------A   61 (557)
Q Consensus        11 H~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~--------------~~~~~~~~~l~sgs~Dg~---------------i   61 (557)
                      -.-++..+++||.|+++....-.-|.+|.-..              +.++|.+.+|.+-+....               +
T Consensus        31 ~~~p~~~~~~SP~G~~l~~~~~~~V~~~~g~~~~~l~~~~~~~V~~~~fSP~~kYL~tw~~~pi~~pe~e~sp~~~~n~~  110 (561)
T COG5354          31 ENWPVAYVSESPLGTYLFSEHAAGVECWGGPSKAKLVRFRHPDVKYLDFSPNEKYLVTWSREPIIEPEIEISPFTSKNNV  110 (561)
T ss_pred             cCcchhheeecCcchheehhhccceEEccccchhheeeeecCCceecccCcccceeeeeccCCccChhhccCCccccCce
Confidence            45578899999999955555555677775443              788899999998776544               9


Q ss_pred             EEEECCCCeEEEEEcccCCc--EE-EEEEcCCCEEEEEECCCeEEEEeCCCcE----EEEEeCCCCCEEEEEEeCCCe--
Q psy7057          62 KLWCLESQQCKLTIRQHEMA--VW-GVIQLANGIIVTGCADKTIKLHSEEGEF----LKTLTGHTDCVRGLAVLNDTD--  132 (557)
Q Consensus        62 ~iwd~~~~~~~~~l~~h~~~--V~-~l~~~~~~~l~sgs~dg~I~vwd~~~~~----~~~l~~h~~~V~~l~~~~~~~--  132 (557)
                      .+||+.++..+..+.....+  .+ -+.|+-+..++.--....+.|++.++..    .+.++  ...|....++|.+.  
T Consensus       111 ~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~ARvv~~sl~i~e~t~n~~~~p~~~lr--~~gi~dFsisP~~n~~  188 (561)
T COG5354         111 FVWDIASGMIVFSFNGISQPYLGWPVLKFSIDDKYVARVVGSSLYIHEITDNIEEHPFKNLR--PVGILDFSISPEGNHD  188 (561)
T ss_pred             eEEeccCceeEeeccccCCcccccceeeeeecchhhhhhccCeEEEEecCCccccCchhhcc--ccceeeEEecCCCCCc
Confidence            99999999999998877666  55 5677765532222244568888753332    22222  35688888888732  


Q ss_pred             -EE-----EEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEE------e-----CCCeEEEEECCCC--c
Q psy7057         133 -FV-----SCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSG------G-----EDQCVCVYQNKAQ--N  191 (557)
Q Consensus       133 -lv-----s~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~------s-----~Dg~I~iwd~~~~--~  191 (557)
                       |+     ....++++++|.+..++.+.+-.--...-..+.|  .|++|++-      +     ....++++++...  .
T Consensus       189 ~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lfk~~~~qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~~i~  268 (561)
T COG5354         189 ELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLFKVSGVQLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRITERSIP  268 (561)
T ss_pred             eEEEEccccCCCCcEEEEEEccCCCeeeeeeeEeecccEEEEecCCceEEEEEEEeeecccceeccceEEEEeecccccc
Confidence             33     3567889999999876655442211112223334  34432211      0     1245778886543  2


Q ss_pred             eEeeCCccEEEEEEcCCCc---EEEEEcCCcEEEEecCCC
Q psy7057         192 SFMIPAMSVWAVAILPNSD---IVTGSSDGIVRVFSANPD  228 (557)
Q Consensus       192 ~~~~~~~~v~~v~~~p~g~---l~sg~~Dg~I~iwd~~~~  228 (557)
                      ......++|...+|.|.++   +++|-.+.++.+++++..
T Consensus       269 V~~~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N  308 (561)
T COG5354         269 VEKDLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGN  308 (561)
T ss_pred             eeccccccceeeeecccCCceeEEecccccceeecccccc
Confidence            2225578999999999987   455668999999998865

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=98.27  E-value=0.0013  Score=64.26  Aligned_cols=192  Identities=15%  Similarity=0.146  Sum_probs=122.9

Q ss_pred             EEEEcC-CCcEE-EEECCCcEEEEcCCC-------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcc----
Q psy7057          17 SLSVTP-DGCIL-SASRDKSAKLWKPND-------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQ----   77 (557)
Q Consensus        17 ~l~~sp-dg~l~-sgs~Dg~V~iWd~~~-------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~----   77 (557)
                      +++|.+ ++.|+ +--..+.|..|+..+             +........|+.+...+. .++|+.+++.......    
T Consensus         4 gp~~d~~~g~l~~~D~~~~~i~~~~~~~~~~~~~~~~~~~G~~~~~~~g~l~v~~~~~~-~~~d~~~g~~~~~~~~~~~~   82 (246)
T PF08450_consen    4 GPVWDPRDGRLYWVDIPGGRIYRVDPDTGEVEVIDLPGPNGMAFDRPDGRLYVADSGGI-AVVDPDTGKVTVLADLPDGG   82 (246)
T ss_dssp             EEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEESSSEEEEEEECTTSEEEEEETTCE-EEEETTTTEEEEEEEEETTC
T ss_pred             ceEEECCCCEEEEEEcCCCEEEEEECCCCeEEEEecCCCceEEEEccCCEEEEEEcCce-EEEecCCCcEEEEeeccCCC
Confidence            567887 66654 555688898898876             333323466666666554 5559988864433332    


Q ss_pred             -cCCcEEEEEEcCCC-EEEEEECC--------CeEEEEeCCCcEEEEEeCCCCCEEEEEEeCCCe-E-EEEECCCeEEEE
Q psy7057          78 -HEMAVWGVIQLANG-IIVTGCAD--------KTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTD-F-VSCSNDASIRVW  145 (557)
Q Consensus        78 -h~~~V~~l~~~~~~-~l~sgs~d--------g~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~~~-l-vs~s~Dg~I~vw  145 (557)
                       .....+.+++.++| +.++....        +.+..++..++... +...-.....|+|+|+++ | ++-+..+.|..+
T Consensus        83 ~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~~~~~~-~~~~~~~pNGi~~s~dg~~lyv~ds~~~~i~~~  161 (246)
T PF08450_consen   83 VPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPDGKVTV-VADGLGFPNGIAFSPDGKTLYVADSFNGRIWRF  161 (246)
T ss_dssp             SCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETTSEEEE-EEEEESSEEEEEEETTSSEEEEEETTTTEEEEE
T ss_pred             cccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCCCeEEE-EecCcccccceEECCcchheeecccccceeEEE
Confidence             35678899999999 44544433        45777776644433 333345678999999986 4 467788889999


Q ss_pred             ECCC--CeE--EEEE---eCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC--ceEeeCCccEEEEEEc-CCCc
Q psy7057         146 DSTT--GKC--VHTM---YGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ--NSFMIPAMSVWAVAIL-PNSD  210 (557)
Q Consensus       146 d~~~--~~~--~~~~---~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~--~~~~~~~~~v~~v~~~-p~g~  210 (557)
                      ++..  .+.  ...+   ....+..-.+++  +|+++++....+.|.+++....  ..+..+...+++++|- ++.+
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~G~~~~~i~~p~~~~t~~~fgg~~~~  238 (246)
T PF08450_consen  162 DLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDPDGKLLREIELPVPRPTNCAFGGPDGK  238 (246)
T ss_dssp             EEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEETTSCEEEEEE-SSSSEEEEEEESTTSS
T ss_pred             eccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECCCccEEEEEcCCCCCEEEEEEECCCCC
Confidence            8753  211  1222   222234677888  6777777778899999996633  5566665689999994 4544

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=98.23  E-value=0.00039  Score=73.17  Aligned_cols=246  Identities=9%  Similarity=-0.014  Sum_probs=146.8

Q ss_pred             CCcEEEEECCCcEEEEcCCC--------CCC-----------------CCCCCEEEEEECCCeEEEEECCCCeEEEEEcc
Q psy7057          23 DGCILSASRDKSAKLWKPND--------LSP-----------------GAKVNTLLSASWDMTAKLWCLESQQCKLTIRQ   77 (557)
Q Consensus        23 dg~l~sgs~Dg~V~iWd~~~--------~~~-----------------~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~   77 (557)
                      ++++++++.++.+.-+|..+        +..                 .-.+..++.++.++.+..+|.++|+.+.+...
T Consensus        69 ~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~v~~~~v~v~~~~g~l~ald~~tG~~~W~~~~  148 (394)
T PRK11138         69 YNKVYAADRAGLVKALDADTGKEIWSVDLSEKDGWFSKNKSALLSGGVTVAGGKVYIGSEKGQVYALNAEDGEVAWQTKV  148 (394)
T ss_pred             CCEEEEECCCCeEEEEECCCCcEeeEEcCCCcccccccccccccccccEEECCEEEEEcCCCEEEEEECCCCCCcccccC
Confidence            45567777777777777654        110                 01245778888999999999999998877654


Q ss_pred             cCCcEEEEEEcCCCEEEEEECCCeEEEEe-CCCcEEEEEeCCCCCE-----EEEEEeCCCeEEEEECCCeEEEEECCCCe
Q psy7057          78 HEMAVWGVIQLANGIIVTGCADKTIKLHS-EEGEFLKTLTGHTDCV-----RGLAVLNDTDFVSCSNDASIRVWDSTTGK  151 (557)
Q Consensus        78 h~~~V~~l~~~~~~~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V-----~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~  151 (557)
                      ... +.+--...++.++.++.++.+..+| .+|+.+.........+     .+-... ++.++.++.++.+..+|..+|+
T Consensus       149 ~~~-~~ssP~v~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~sP~v~-~~~v~~~~~~g~v~a~d~~~G~  226 (394)
T PRK11138        149 AGE-ALSRPVVSDGLVLVHTSNGMLQALNESDGAVKWTVNLDVPSLTLRGESAPATA-FGGAIVGGDNGRVSAVLMEQGQ  226 (394)
T ss_pred             CCc-eecCCEEECCEEEEECCCCEEEEEEccCCCEeeeecCCCCcccccCCCCCEEE-CCEEEEEcCCCEEEEEEccCCh
Confidence            332 2221111256777888899999999 5788777665321111     111111 3567778889999999999988


Q ss_pred             EEEEEeCCCC-----------cEEEEEEcCCEEEEEeCCCeEEEEECCCCceEee-CCccEEEEEEcCCCcEEEEEcCCc
Q psy7057         152 CVHTMYGHPN-----------FIYSVAAHGDLITSGGEDQCVCVYQNKAQNSFMI-PAMSVWAVAILPNSDIVTGSSDGI  219 (557)
Q Consensus       152 ~~~~~~~h~~-----------~V~~l~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~-~~~~v~~v~~~p~g~l~sg~~Dg~  219 (557)
                      .+........           ...+....+..++.++.++.+..+|..+.+.+-. .......+.. .++.++.++.+|.
T Consensus       227 ~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~-~~~~vy~~~~~g~  305 (394)
T PRK11138        227 LIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLVALDLRSGQIVWKREYGSVNDFAV-DGGRIYLVDQNDR  305 (394)
T ss_pred             hhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEEEEECCCCCEEEeecCCCccCcEE-ECCEEEEEcCCCe
Confidence            7655431100           0112223466777888899999999877633322 1111112222 2445788889999


Q ss_pred             EEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCChh
Q psy7057         220 VRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQ  275 (557)
Q Consensus       220 I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~~~  275 (557)
                      +..++..+++..-........ .......   ....++.++.||.|.+.+..+++.
T Consensus       306 l~ald~~tG~~~W~~~~~~~~-~~~sp~v---~~g~l~v~~~~G~l~~ld~~tG~~  357 (394)
T PRK11138        306 VYALDTRGGVELWSQSDLLHR-LLTAPVL---YNGYLVVGDSEGYLHWINREDGRF  357 (394)
T ss_pred             EEEEECCCCcEEEcccccCCC-cccCCEE---ECCEEEEEeCCCEEEEEECCCCCE
Confidence            999998877543111100000 0000000   122457789999999999776643

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=98.21  E-value=4.8e-06  Score=56.08  Aligned_cols=37  Identities=24%  Similarity=0.507  Sum_probs=25.7

Q ss_pred             eEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe
Q psy7057          70 QCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS  106 (557)
Q Consensus        70 ~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd  106 (557)
                      +++.++.+|...|++++|+|++ .|++++.|++|++||
T Consensus         2 ~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    2 KCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             EEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred             eEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence            4566677777777777777765 677777777777775

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>KOG2695|consensus

Probab=98.18  E-value=1e-05  Score=78.96  Aligned_cols=142  Identities=18%  Similarity=0.169  Sum_probs=105.0

Q ss_pred             EEEECCCcEEEEcCCC--------------CCCCCCCCEEEEEECCCeEEEEECCCC-----eEEEEEcccCCcEEEEEE
Q psy7057          27 LSASRDKSAKLWKPND--------------LSPGAKVNTLLSASWDMTAKLWCLESQ-----QCKLTIRQHEMAVWGVIQ   87 (557)
Q Consensus        27 ~sgs~Dg~V~iWd~~~--------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~-----~~~~~l~~h~~~V~~l~~   87 (557)
                      ++.+.+..|-+-++.+              +.+...++.+..|++.|.|...|++..     .+...+. |...|+|+..
T Consensus       228 fs~G~sqqv~L~nvetg~~qsf~sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rly-h~Ssvtslq~  306 (425)
T KOG2695|consen  228 FSVGLSQQVLLTNVETGHQQSFQSKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRLY-HDSSVTSLQI  306 (425)
T ss_pred             ecccccceeEEEEeecccccccccchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEEE-cCcchhhhhh
Confidence            4566666777777665              455556889999999999999999764     3555555 8999999987


Q ss_pred             cC-CC-EEEEEECCCeEEEEeC-C---CcEEEEEeCCCCCEEEEEE--eCC-CeEEEEECCCeEEEEECCCCeEEEEEeC
Q psy7057          88 LA-NG-IIVTGCADKTIKLHSE-E---GEFLKTLTGHTDCVRGLAV--LND-TDFVSCSNDASIRVWDSTTGKCVHTMYG  158 (557)
Q Consensus        88 ~~-~~-~l~sgs~dg~I~vwd~-~---~~~~~~l~~h~~~V~~l~~--~~~-~~lvs~s~Dg~I~vwd~~~~~~~~~~~~  158 (557)
                      .. ++ .|++.+.+|+|++||. -   +.-+.++.||-..-.-+-+  .++ +.+++++.|...|||.++.+..+.++.-
T Consensus       307 Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~~ghLl~tipf  386 (425)
T KOG2695|consen  307 LQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLDSGHLLCTIPF  386 (425)
T ss_pred             hccccceEeeccCcCceeEeeehhhhcccceeeeecccccccccccccccccceEEEccCeeEEEEEecccCceeeccCC
Confidence            76 44 8888899999999993 2   3348888998654443333  333 5577999999999999999999888763


Q ss_pred             C----CCcEEEEEEc
Q psy7057         159 H----PNFIYSVAAH  169 (557)
Q Consensus       159 h----~~~V~~l~~~  169 (557)
                      .    ...+.+++++
T Consensus       387 ~~s~~e~d~~sv~~~  401 (425)
T KOG2695|consen  387 PYSASEVDIPSVAFD  401 (425)
T ss_pred             CCccccccccceehh
Confidence            3    2245566663

>KOG1275|consensus

Probab=98.18  E-value=4.1e-05  Score=83.28  Aligned_cols=176  Identities=14%  Similarity=0.111  Sum_probs=128.5

Q ss_pred             CCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCCEEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEE
Q psy7057          48 KVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLA  126 (557)
Q Consensus        48 ~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~  126 (557)
                      .+..++.|+....+..+|+.+.+..+...-....|.-++.+ +..+.+|...|+|.+-| .+-+.++++..|++.|..+.
T Consensus       146 ~~~~~i~Gg~Q~~li~~Dl~~~~e~r~~~v~a~~v~imR~N-nr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~siSDfD  224 (1118)
T KOG1275|consen  146 GPSTLIMGGLQEKLIHIDLNTEKETRTTNVSASGVTIMRYN-NRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSISDFD  224 (1118)
T ss_pred             CCcceeecchhhheeeeecccceeeeeeeccCCceEEEEec-CcEEEeecccceEEeecCCcCceeeeeeccccceeeee
Confidence            45678888888888899998887766665444455555432 34899999999999999 56788999999999999988


Q ss_pred             EeCCCeEEEEEC---------CCeEEEEECCCCeEEEEEeCCCCcEEEEEE---cCCEEEEEeCCCeEEEEE---CCCC-
Q psy7057         127 VLNDTDFVSCSN---------DASIRVWDSTTGKCVHTMYGHPNFIYSVAA---HGDLITSGGEDQCVCVYQ---NKAQ-  190 (557)
Q Consensus       127 ~~~~~~lvs~s~---------Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~---~~~~l~s~s~Dg~I~iwd---~~~~-  190 (557)
                      +.. +.|++|+.         |..|+|||+|..+.+.-+.-+-++ .-+.|   -...+++++..|...+-|   +... 
T Consensus       225 v~G-NlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~~P-~flrf~Psl~t~~~V~S~sGq~q~vd~~~lsNP~  302 (1118)
T KOG1275|consen  225 VQG-NLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPYGP-QFLRFHPSLTTRLAVTSQSGQFQFVDTATLSNPP  302 (1118)
T ss_pred             ccC-CeEEEeecccccccccccchhhhhhhhhhhccCCcccccCc-hhhhhcccccceEEEEecccceeeccccccCCCc
Confidence            753 45777764         567899999987766554433332 12223   345788889999999988   3333 


Q ss_pred             ---ceEeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecC
Q psy7057         191 ---NSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSAN  226 (557)
Q Consensus       191 ---~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~  226 (557)
                         ..+......+..++++++++ ++.|..+|.|.+|.-.
T Consensus       303 ~~~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa~~  342 (1118)
T KOG1275|consen  303 AGVKMVNPNGSGISAFDISSNGDALAFGDHEGHVNLWADR  342 (1118)
T ss_pred             cceeEEccCCCcceeEEecCCCceEEEecccCcEeeecCC
Confidence               22222334599999999999 8899999999999843

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=98.15  E-value=0.00033  Score=80.70  Aligned_cols=220  Identities=14%  Similarity=0.115  Sum_probs=125.1

Q ss_pred             CCCCCCEEEEEECCCeEEEE----ECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcEEE------
Q psy7057          45 PGAKVNTLLSASWDMTAKLW----CLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFLK------  113 (557)
Q Consensus        45 ~~~~~~~l~sgs~Dg~i~iw----d~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~~------  113 (557)
                      +-++...++.+..+|.|.+.    +..+.. +.....-...|.|++|+||+ +|+..+.++++.+.+.+..++.      
T Consensus        83 yl~d~~~l~~~~~~Gdi~~~~~~~~~~~~~-~E~VG~vd~GI~a~~WSPD~Ella~vT~~~~l~~mt~~fd~i~E~~l~~  161 (928)
T PF04762_consen   83 YLADSESLCIALASGDIILVREDPDPDEDE-IEIVGSVDSGILAASWSPDEELLALVTGEGNLLLMTRDFDPISEVPLDS  161 (928)
T ss_pred             eccCCCcEEEEECCceEEEEEccCCCCCce-eEEEEEEcCcEEEEEECCCcCEEEEEeCCCEEEEEeccceEEEEeecCc
Confidence            33455666666667777666    433322 11122235677777777777 6666666666665432211110      


Q ss_pred             -------------------------------------------EEeCCCCCEEEEEEeCCCeEE-EEEC------CCeEE
Q psy7057         114 -------------------------------------------TLTGHTDCVRGLAVLNDTDFV-SCSN------DASIR  143 (557)
Q Consensus       114 -------------------------------------------~l~~h~~~V~~l~~~~~~~lv-s~s~------Dg~I~  143 (557)
                                                                 .+. +.+.-..|+|-.||.++ +.+-      -..||
T Consensus       162 ~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s-~dd~~~~ISWRGDG~yFAVss~~~~~~~~R~iR  240 (928)
T PF04762_consen  162 DDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLS-WDDGRVRISWRGDGEYFAVSSVEPETGSRRVIR  240 (928)
T ss_pred             cccCCCceeeeccCcccCccCcchhhhhhhhccCCCCCccccCccc-cCCCceEEEECCCCcEEEEEEEEcCCCceeEEE
Confidence                                                       011 23345678899999854 3332      25799


Q ss_pred             EEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeC---CCeEEEEECCCC--ceEe----eCCccEEEEEEcCCCcEE
Q psy7057         144 VWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGE---DQCVCVYQNKAQ--NSFM----IPAMSVWAVAILPNSDIV  212 (557)
Q Consensus       144 vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~---Dg~I~iwd~~~~--~~~~----~~~~~v~~v~~~p~g~l~  212 (557)
                      ||+ +.|....+...-.+.-.+++|  .|++|++.-.   ...|.+|.-...  ..+.    .....|..+.|++++.++
T Consensus       241 Vy~-ReG~L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfErNGLrhgeF~l~~~~~~~~v~~l~Wn~ds~iL  319 (928)
T PF04762_consen  241 VYS-REGELQSTSEPVDGLEGALSWRPSGNLIASSQRLPDRHDVVFFERNGLRHGEFTLRFDPEEEKVIELAWNSDSEIL  319 (928)
T ss_pred             EEC-CCceEEeccccCCCccCCccCCCCCCEEEEEEEcCCCcEEEEEecCCcEeeeEecCCCCCCceeeEEEECCCCCEE
Confidence            999 667766555544555567788  7787877654   356777874333  2222    234579999999999944


Q ss_pred             EEEcCCcEEEEecCCCCcc-hhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEE
Q psy7057         213 TGSSDGIVRVFSANPDRQA-EDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRV  267 (557)
Q Consensus       213 sg~~Dg~I~iwd~~~~~~~-~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~Irv  267 (557)
                      +......|.+|...+-.-- .....-.....+..+.|.+..+..+...+.+|.+..
T Consensus       320 Av~~~~~vqLWt~~NYHWYLKqei~~~~~~~~~~~~Wdpe~p~~L~v~t~~g~~~~  375 (928)
T PF04762_consen  320 AVWLEDRVQLWTRSNYHWYLKQEIRFSSSESVNFVKWDPEKPLRLHVLTSNGQYEI  375 (928)
T ss_pred             EEEecCCceEEEeeCCEEEEEEEEEccCCCCCCceEECCCCCCEEEEEecCCcEEE
Confidence            3343444999998764310 000000111122336677777766666666555533

>PRK01029 tolB translocation protein TolB; Provisional

Probab=98.13  E-value=0.00035  Score=74.18  Aligned_cols=209  Identities=13%  Similarity=-0.039  Sum_probs=114.1

Q ss_pred             CeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-E--E-EEEECCCe--EEEEeCCCcEEEEEeCCCCCEEEEEEeCCCe
Q psy7057          59 MTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-I--I-VTGCADKT--IKLHSEEGEFLKTLTGHTDCVRGLAVLNDTD  132 (557)
Q Consensus        59 g~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~--l-~sgs~dg~--I~vwd~~~~~~~~l~~h~~~V~~l~~~~~~~  132 (557)
                      ..|.+.|...+.. ..+......+.+-.|+|+| .  + .+...++.  |.+.+..+.....+...........|+|+|+
T Consensus       165 ~~l~~~d~dG~~~-~~lt~~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~lt~~~g~~~~p~wSPDG~  243 (428)
T PRK01029        165 GELWSVDYDGQNL-RPLTQEHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGKKILALQGNQLMPTFSPRKK  243 (428)
T ss_pred             ceEEEEcCCCCCc-eEcccCCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCCceEeecCCCCccceEECCCCC
Confidence            3566777655443 3344455566778999997 2  3 24444444  6666665555455554555566789999986


Q ss_pred             -EEEEE-C----CCeEEEEECCCC---eEEEEEeCCCCcEEEEEE--cCCEEEEEe-CCCeEEEE--ECCC----CceEe
Q psy7057         133 -FVSCS-N----DASIRVWDSTTG---KCVHTMYGHPNFIYSVAA--HGDLITSGG-EDQCVCVY--QNKA----QNSFM  194 (557)
Q Consensus       133 -lvs~s-~----Dg~I~vwd~~~~---~~~~~~~~h~~~V~~l~~--~~~~l~s~s-~Dg~I~iw--d~~~----~~~~~  194 (557)
                       |+..+ .    +..+.+|++..+   +.......+.......+|  +|+.|+..+ .++...+|  ++..    ...+.
T Consensus       244 ~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~~lt  323 (428)
T PRK01029        244 LLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPRLLT  323 (428)
T ss_pred             EEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcccccceEEec
Confidence             55333 2    233455776642   333333232233345566  787766554 46655555  4321    13444


Q ss_pred             eCCccEEEEEEcCCCc-EEEEEc-C--CcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCC--CcEEEE
Q psy7057         195 IPAMSVWAVAILPNSD-IVTGSS-D--GIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDD--GIVRVF  268 (557)
Q Consensus       195 ~~~~~v~~v~~~p~g~-l~sg~~-D--g~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~D--G~IrvW  268 (557)
                      .....+....|+|+|+ |+..+. +  ..|.+|++.++........   ........+.++....+++...+  ..|.++
T Consensus       324 ~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~~Lt~~---~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~v  400 (428)
T PRK01029        324 KKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDYQLTTS---PENKESPSWAIDSLHLVYSAGNSNESELYLI  400 (428)
T ss_pred             cCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeEEccCC---CCCccceEECCCCCEEEEEECCCCCceEEEE
Confidence            4445677889999998 554443 2  3689999987755432211   11223344444444333343333  345555


Q ss_pred             ecC
Q psy7057         269 SAN  271 (557)
Q Consensus       269 ~~~  271 (557)
                      ++.
T Consensus       401 dl~  403 (428)
T PRK01029        401 SLI  403 (428)
T ss_pred             ECC
Confidence            544

>KOG1912|consensus

Probab=98.11  E-value=4.5e-05  Score=81.57  Aligned_cols=211  Identities=14%  Similarity=0.082  Sum_probs=142.2

Q ss_pred             CcEEEEEeccCcccEEEEEEcCCCc---EEEEECCCcEEEEcCCCCCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcc
Q psy7057           1 MYKLSTALYGHSMDVRSLSVTPDGC---ILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQ   77 (557)
Q Consensus         1 ~~kl~~~l~gH~~~V~~l~~spdg~---l~sgs~Dg~V~iWd~~~~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~   77 (557)
                      ++++++++.-|...|+.+.|.|-..   +++-                ....-.|+++...|.|.+||...+..+..+..
T Consensus        44 s~q~iqsie~h~s~V~~VrWap~~~p~~llS~----------------~~~~lliAsaD~~GrIil~d~~~~s~~~~l~~  107 (1062)
T KOG1912|consen   44 SLQLIQSIELHQSAVTSVRWAPAPSPRDLLSP----------------SSSQLLIASADISGRIILVDFVLASVINWLSH  107 (1062)
T ss_pred             hhhhhhccccCccceeEEEeccCCCchhccCc----------------cccceeEEeccccCcEEEEEehhhhhhhhhcC
Confidence            4678889999999999999998642   3321                11234677888889999999999888888999


Q ss_pred             cCCcEEEEEEcCC---C--EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCC--CeEEEEECCCeEEEEECC-
Q psy7057          78 HEMAVWGVIQLAN---G--IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLND--TDFVSCSNDASIRVWDST-  148 (557)
Q Consensus        78 h~~~V~~l~~~~~---~--~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~--~~lvs~s~Dg~I~vwd~~-  148 (557)
                      |..++..++|.+.   .  .|+.-....++.+|+ .+|+.............|+.+.|-  ..|..-+..|.+.+-+.- 
T Consensus       108 ~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ys~~iLs~f~~DPfd~rh~~~l~s~g~vl~~~~l~  187 (1062)
T KOG1912|consen  108 SNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDYSHEILSCFRVDPFDSRHFCVLGSKGFVLSCKDLG  187 (1062)
T ss_pred             CCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCceeeccccCCcceeeeeeCCCCcceEEEEccCceEEEEeccC
Confidence            9999999999872   2  677777888999998 778887777655566677777764  224444444555554432 


Q ss_pred             ------CCeEEEEEeCCCC----------------c-------EEE--EEEcC--CEEEEEeCCCeEEEEECCCC---ce
Q psy7057         149 ------TGKCVHTMYGHPN----------------F-------IYS--VAAHG--DLITSGGEDQCVCVYQNKAQ---NS  192 (557)
Q Consensus       149 ------~~~~~~~~~~h~~----------------~-------V~~--l~~~~--~~l~s~s~Dg~I~iwd~~~~---~~  192 (557)
                            .++..+.-..|++                .       .+|  ++|.+  +.++-..--..+.++|++-.   ..
T Consensus       188 ~sep~~pgk~~qI~sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~faf~p~~rn~lfi~~prellv~dle~~~~l~v  267 (1062)
T KOG1912|consen  188 LSEPDVPGKEFQITSDHSDLAHLERETATGNSTTSTPASAYFITYCAQFAFSPHWRNILFITFPRELLVFDLEYECCLAV  267 (1062)
T ss_pred             CCCCCCCceeEEEecCccchhhhhhhhhccccccCCCcchhHHHHHHhhhcChhhhceEEEEeccceEEEcchhhceeEE
Confidence                  1222222222222                0       011  12222  22333344567889996644   45


Q ss_pred             EeeCCccEEEEEEcCCCc---EEEEEcCCcEEEEecCC
Q psy7057         193 FMIPAMSVWAVAILPNSD---IVTGSSDGIVRVFSANP  227 (557)
Q Consensus       193 ~~~~~~~v~~v~~~p~g~---l~sg~~Dg~I~iwd~~~  227 (557)
                      +......+.-+.+.|+++   +++...||.+.+|-.+.
T Consensus       268 vpier~~akfv~vlP~~~rd~LfclH~nG~ltirvrk~  305 (1062)
T KOG1912|consen  268 VPIERGGAKFVDVLPDPRRDALFCLHSNGRLTIRVRKE  305 (1062)
T ss_pred             EEeccCCcceeEeccCCCcceEEEEecCCeEEEEEeec
Confidence            555666777888889876   88999999999998765

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=98.10  E-value=0.00074  Score=69.43  Aligned_cols=170  Identities=12%  Similarity=0.080  Sum_probs=103.4

Q ss_pred             CCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-E-EEEE---E-------CCCeEEEEeCCCcEEEEEeCCCCCEEE
Q psy7057          57 WDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-I-IVTG---C-------ADKTIKLHSEEGEFLKTLTGHTDCVRG  124 (557)
Q Consensus        57 ~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~-l~sg---s-------~dg~I~vwd~~~~~~~~l~~h~~~V~~  124 (557)
                      .++++++|.+..+..+.+-.-....=+.+.|.+.| . ++-.   .       ....+.+++.+..-+.....-.++|..
T Consensus       200 kpa~~~i~sIp~~s~l~tk~lfk~~~~qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~~i~V~~~~~~pVhd  279 (561)
T COG5354         200 KPAMVRILSIPKNSVLVTKNLFKVSGVQLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRITERSIPVEKDLKDPVHD  279 (561)
T ss_pred             CCcEEEEEEccCCCeeeeeeeEeecccEEEEecCCceEEEEEEEeeecccceeccceEEEEeecccccceecccccccee
Confidence            45566677666554443322222333456777766 2 2111   1       124566777666655555566899999


Q ss_pred             EEEeCCCe-EE--EEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCC---CeEEEEECCCC-ceE-e
Q psy7057         125 LAVLNDTD-FV--SCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGED---QCVCVYQNKAQ-NSF-M  194 (557)
Q Consensus       125 l~~~~~~~-lv--s~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~D---g~I~iwd~~~~-~~~-~  194 (557)
                      .+|.|.+. |+  +|-.+.++.++|++.. ....+.  ...=..+.|  ++++++.++-|   |.+-+||.... ... .
T Consensus       280 f~W~p~S~~F~vi~g~~pa~~s~~~lr~N-l~~~~P--e~~rNT~~fsp~~r~il~agF~nl~gni~i~~~~~rf~~~~~  356 (561)
T COG5354         280 FTWEPLSSRFAVISGYMPASVSVFDLRGN-LRFYFP--EQKRNTIFFSPHERYILFAGFDNLQGNIEIFDPAGRFKVAGA  356 (561)
T ss_pred             eeecccCCceeEEecccccceeecccccc-eEEecC--CcccccccccCcccEEEEecCCccccceEEeccCCceEEEEE
Confidence            99998854 54  5668889999998755 433333  333334444  67777776654   68999996555 333 2


Q ss_pred             eCCccEEEEEEcCCCcE-EEE--E----cCCcEEEEecCCCC
Q psy7057         195 IPAMSVWAVAILPNSDI-VTG--S----SDGIVRVFSANPDR  229 (557)
Q Consensus       195 ~~~~~v~~v~~~p~g~l-~sg--~----~Dg~I~iwd~~~~~  229 (557)
                      .......-+.|+|++++ .+.  +    .|..|.||++....
T Consensus       357 ~~~~n~s~~~wspd~qF~~~~~ts~k~~~Dn~i~l~~v~g~~  398 (561)
T COG5354         357 FNGLNTSYCDWSPDGQFYDTDTTSEKLRVDNSIKLWDVYGAK  398 (561)
T ss_pred             eecCCceEeeccCCceEEEecCCCcccccCcceEEEEecCch
Confidence            22334455679999993 332  2    27899999997643

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=98.10  E-value=0.0018  Score=66.04  Aligned_cols=186  Identities=13%  Similarity=0.072  Sum_probs=134.3

Q ss_pred             cCCCcEEEEECCCcEEEEcCCC------------------------------CCCCCCCCEEEEEECCCeEEEEECCCCe
Q psy7057          21 TPDGCILSASRDKSAKLWKPND------------------------------LSPGAKVNTLLSASWDMTAKLWCLESQQ   70 (557)
Q Consensus        21 spdg~l~sgs~Dg~V~iWd~~~------------------------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~   70 (557)
                      +.||+-+.-+.-|.|.++|..+                              ++.. +|++++..|. |.+.|.+...+-
T Consensus       275 nsDGkrIvFq~~GdIylydP~td~lekldI~lpl~rk~k~~k~~~pskyledfa~~-~Gd~ia~VSR-GkaFi~~~~~~~  352 (668)
T COG4946         275 NSDGKRIVFQNAGDIYLYDPETDSLEKLDIGLPLDRKKKQPKFVNPSKYLEDFAVV-NGDYIALVSR-GKAFIMRPWDGY  352 (668)
T ss_pred             CCCCcEEEEecCCcEEEeCCCcCcceeeecCCccccccccccccCHHHhhhhhccC-CCcEEEEEec-CcEEEECCCCCe
Confidence            4567755556778899998876                              1222 4677777775 455565544433


Q ss_pred             EEEEEcccCCcEEEEEEcCCC-EEEEEECCC-eEEEEeCCCcEEEEEeCCCCCEEEEEEeCCCeEEE-EECCCeEEEEEC
Q psy7057          71 CKLTIRQHEMAVWGVIQLANG-IIVTGCADK-TIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTDFVS-CSNDASIRVWDS  147 (557)
Q Consensus        71 ~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg-~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~~~lvs-~s~Dg~I~vwd~  147 (557)
                      .+.  .+|...|.-..+..++ .++.|..|| .+-|+|..+..+..+...-+.|.++..+++|+++. +.....|-+.|+
T Consensus       353 ~iq--v~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e~kr~e~~lg~I~av~vs~dGK~~vvaNdr~el~vidi  430 (668)
T COG4946         353 SIQ--VGKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGEVKRIEKDLGNIEAVKVSPDGKKVVVANDRFELWVIDI  430 (668)
T ss_pred             eEE--cCCCCceEEEEEccCCcceEEeccCCceEEEEecCCceEEEeeCCccceEEEEEcCCCcEEEEEcCceEEEEEEe
Confidence            222  2466667777766655 788899999 89999988888888888889999999999999654 444567888999


Q ss_pred             CCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCC----eEEEEECCCCc--eEeeCCccEEEEEEcCCCc
Q psy7057         148 TTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQ----CVCVYQNKAQN--SFMIPAMSVWAVAILPNSD  210 (557)
Q Consensus       148 ~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg----~I~iwd~~~~~--~~~~~~~~v~~v~~~p~g~  210 (557)
                      .++.....-+...+.|..+.|  ++++++-+--+|    .|+++|+...+  ....+...=.+-+|.|+++
T Consensus       431 dngnv~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy~vTT~ta~DfsPaFD~d~r  501 (668)
T COG4946         431 DNGNVRLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIYDVTTPTAYDFSPAFDPDGR  501 (668)
T ss_pred             cCCCeeEecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCeEEEecCCcccccCcccCCCCc
Confidence            999876666667788999999  566788776665    68999977653  3344444455677888887

>KOG2066|consensus

Probab=98.09  E-value=0.00012  Score=78.84  Aligned_cols=170  Identities=12%  Similarity=0.052  Sum_probs=120.5

Q ss_pred             ccEEEEEEcCCCcEEEEECCCcEEEEcCCCC--------CCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEE
Q psy7057          13 MDVRSLSVTPDGCILSASRDKSAKLWKPNDL--------SPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWG   84 (557)
Q Consensus        13 ~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~~--------~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~   84 (557)
                      +.++|++++ +..|+-|..+|.|++.+.+..        +.+..|.+++|||.||+|.|-.+-+.+...++. ...++.+
T Consensus        40 D~is~~av~-~~~~~~GtH~g~v~~~~~~~~~~~~~~~s~~~~~Gey~asCS~DGkv~I~sl~~~~~~~~~d-f~rpiks  117 (846)
T KOG2066|consen   40 DAISCCAVH-DKFFALGTHRGAVYLTTCQGNPKTNFDHSSSILEGEYVASCSDDGKVVIGSLFTDDEITQYD-FKRPIKS  117 (846)
T ss_pred             hHHHHHHhh-cceeeeccccceEEEEecCCcccccccccccccCCceEEEecCCCcEEEeeccCCccceeEe-cCCccee
Confidence            445555554 223788899999999987651        224468999999999999999998887766665 4678999


Q ss_pred             EEEcCC------CEEEEEECCCeEEEEe---CCCcEEEEEeCCCCCEEEEEEeCCCeEEEEECCCeEEEEECCCCeEEEE
Q psy7057          85 VIQLAN------GIIVTGCADKTIKLHS---EEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHT  155 (557)
Q Consensus        85 l~~~~~------~~l~sgs~dg~I~vwd---~~~~~~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~~~~~  155 (557)
                      ++++|+      +.+++|+.-| +.++.   ...+....+..-.++|.+++|.  |.+++-.+|--|+++|+.+++.+..
T Consensus       118 ial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l~~~eG~I~~i~W~--g~lIAWand~Gv~vyd~~~~~~l~~  194 (846)
T KOG2066|consen  118 IALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVLSEGEGPIHSIKWR--GNLIAWANDDGVKVYDTPTRQRLTN  194 (846)
T ss_pred             EEeccchhhhhhhheeecCcce-EEEehhhhhcCccceeeecCccceEEEEec--CcEEEEecCCCcEEEeccccceeec
Confidence            999996      3899999998 77765   2222222466677899999996  5566555666699999988887777


Q ss_pred             EeCCCCc------EEEEEE-cCCEEEEEeCCCeEEEEECC
Q psy7057         156 MYGHPNF------IYSVAA-HGDLITSGGEDQCVCVYQNK  188 (557)
Q Consensus       156 ~~~h~~~------V~~l~~-~~~~l~s~s~Dg~I~iwd~~  188 (557)
                      +......      -..+.| +...|+.| ...+|++...+
T Consensus       195 i~~p~~~~R~e~fpphl~W~~~~~LVIG-W~d~v~i~~I~  233 (846)
T KOG2066|consen  195 IPPPSQSVRPELFPPHLHWQDEDRLVIG-WGDSVKICSIK  233 (846)
T ss_pred             cCCCCCCCCcccCCCceEecCCCeEEEe-cCCeEEEEEEe
Confidence            6543332      345667 44555555 44567777755

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=98.08  E-value=4.3e-05  Score=73.63  Aligned_cols=210  Identities=12%  Similarity=0.182  Sum_probs=130.5

Q ss_pred             cccEEEEEEcCCCc-EEEEECCCcEEEEcCCC---------------------------------CCCC--CCCCEEEEE
Q psy7057          12 SMDVRSLSVTPDGC-ILSASRDKSAKLWKPND---------------------------------LSPG--AKVNTLLSA   55 (557)
Q Consensus        12 ~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~---------------------------------~~~~--~~~~~l~sg   55 (557)
                      .+.|+++.|...|. |++|...|.|.++.-..                                 +.+-  .....++..
T Consensus        26 ad~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLls  105 (460)
T COG5170          26 ADKITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLLS  105 (460)
T ss_pred             cceeeEEEeccccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEEe
Confidence            45789999999887 88998899999997654                                 1111  123457777


Q ss_pred             ECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcC-CCEEEEE--------E-CCCeEEEEeCCCcEEEEE-eCCCCCEEE
Q psy7057          56 SWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLA-NGIIVTG--------C-ADKTIKLHSEEGEFLKTL-TGHTDCVRG  124 (557)
Q Consensus        56 s~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~-~~~l~sg--------s-~dg~I~vwd~~~~~~~~l-~~h~~~V~~  124 (557)
                      +.|++|++|.+........-.  . ..+.-.-+| .|-+.+.        + .|..|...     +.+.. ..|...|.+
T Consensus       106 tNdktiKlWKiyeknlk~va~--n-nls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~-----p~rvyaNaH~yhiNS  177 (460)
T COG5170         106 TNDKTIKLWKIYEKNLKVVAE--N-NLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAK-----PCRVYANAHPYHINS  177 (460)
T ss_pred             cCCceeeeeeeecccchhhhc--c-ccccccccccCCCcCCHHHhhcccccccceEEEec-----cceeccccceeEeee
Confidence            889999999986542211110  0 000000111 1111110        0 11111111     11222 468888999


Q ss_pred             EEEeCCCeEEEEECCCeEEEEECCCCe---EEEEEeCCC-----CcEEEEEEcC---CEEEEEeCCCeEEEEECCCC---
Q psy7057         125 LAVLNDTDFVSCSNDASIRVWDSTTGK---CVHTMYGHP-----NFIYSVAAHG---DLITSGGEDQCVCVYQNKAQ---  190 (557)
Q Consensus       125 l~~~~~~~lvs~s~Dg~I~vwd~~~~~---~~~~~~~h~-----~~V~~l~~~~---~~l~s~s~Dg~I~iwd~~~~---  190 (557)
                      +.+..+...+..+.|-.|.+|++.-..   .+..++.|.     ..|++..|++   ..+.-.+..|.|++-|++..   
T Consensus       178 iS~NsD~et~lSaDdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~alc  257 (460)
T COG5170         178 ISFNSDKETLLSADDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQSALC  257 (460)
T ss_pred             eeecCchheeeeccceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhhhhhhc
Confidence            999988876666778999999976432   233344443     3566666733   46777888999999997732   


Q ss_pred             ----ce----E--------eeCCccEEEEEEcCCCcEEEEEcCCcEEEEecCCCC
Q psy7057         191 ----NS----F--------MIPAMSVWAVAILPNSDIVTGSSDGIVRVFSANPDR  229 (557)
Q Consensus       191 ----~~----~--------~~~~~~v~~v~~~p~g~l~sg~~Dg~I~iwd~~~~~  229 (557)
                          ..    +        ......|..+.|+++|+++.+-.=-+|+|||++..+
T Consensus       258 dn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdyltvkiwDvnm~k  312 (460)
T COG5170         258 DNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDYLTVKIWDVNMAK  312 (460)
T ss_pred             cCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEeccceEEEEeccccc
Confidence                11    1        111246888999999997777777899999998654

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=98.06  E-value=0.0032  Score=62.51  Aligned_cols=218  Identities=11%  Similarity=0.174  Sum_probs=139.2

Q ss_pred             cCcccEEEEEEcCCCc-EEEEEC---CCcEEEEcCCC--------------------CCCCCCCCEEEEEECC-CeEEEE
Q psy7057          10 GHSMDVRSLSVTPDGC-ILSASR---DKSAKLWKPND--------------------LSPGAKVNTLLSASWD-MTAKLW   64 (557)
Q Consensus        10 gH~~~V~~l~~spdg~-l~sgs~---Dg~V~iWd~~~--------------------~~~~~~~~~l~sgs~D-g~i~iw   64 (557)
                      .+.+..+-|+|+|+++ |.++-.   +|.|-.|.++.                    ++.+++++++++++.. |.|.++
T Consensus        37 ~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yvsvd~~g~~vf~AnY~~g~v~v~  116 (346)
T COG2706          37 AELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYVSVDEDGRFVFVANYHSGSVSVY  116 (346)
T ss_pred             cccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEEEECCCCCEEEEEEccCceEEEE
Confidence            4567778899999987 666543   56676665543                    5677888899988764 789999


Q ss_pred             ECCC-CeEEE--EEcccCCc----------EEEEEEcCCC-EEEEEEC-CCeEEEEeCC-CcEE----EEEeCCCCCEEE
Q psy7057          65 CLES-QQCKL--TIRQHEMA----------VWGVIQLANG-IIVTGCA-DKTIKLHSEE-GEFL----KTLTGHTDCVRG  124 (557)
Q Consensus        65 d~~~-~~~~~--~l~~h~~~----------V~~l~~~~~~-~l~sgs~-dg~I~vwd~~-~~~~----~~l~~h~~~V~~  124 (557)
                      .+.. |....  .+..|...          +.+..+.|++ +|++... --.|.+|+.+ |...    ..+ .-....+.
T Consensus       117 p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~~dg~L~~~~~~~v-~~G~GPRH  195 (346)
T COG2706         117 PLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYDLDDGKLTPADPAEV-KPGAGPRH  195 (346)
T ss_pred             EcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEEEcccCcccccccccc-CCCCCcce
Confidence            8855 43221  12234444          7788899999 5555443 2357888843 3321    112 34566899


Q ss_pred             EEEeCCCeEE--EEECCCeEEEEECCCC-eEEEEEeCC---------CCcEEEEEE--cCCEEEEEeC-CCeEEEEECCC
Q psy7057         125 LAVLNDTDFV--SCSNDASIRVWDSTTG-KCVHTMYGH---------PNFIYSVAA--HGDLITSGGE-DQCVCVYQNKA  189 (557)
Q Consensus       125 l~~~~~~~lv--s~s~Dg~I~vwd~~~~-~~~~~~~~h---------~~~V~~l~~--~~~~l~s~s~-Dg~I~iwd~~~  189 (557)
                      |.|+|+++++  .+--+++|.+|..... ..+..++.+         .....+|..  +|++|.++.. ...|-+|.+..
T Consensus       196 i~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLYasNRg~dsI~~f~V~~  275 (346)
T COG2706         196 IVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHISPDGRFLYASNRGHDSIAVFSVDP  275 (346)
T ss_pred             EEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeEEEECCCCCEEEEecCCCCeEEEEEEcC
Confidence            9999999965  6777899999998763 222222221         123334444  7887777653 34677777433


Q ss_pred             C-------ceEeeCCccEEEEEEcCCCc-EEEEEc-CCcEEEEecCCC
Q psy7057         190 Q-------NSFMIPAMSVWAVAILPNSD-IVTGSS-DGIVRVFSANPD  228 (557)
Q Consensus       190 ~-------~~~~~~~~~v~~v~~~p~g~-l~sg~~-Dg~I~iwd~~~~  228 (557)
                      .       .....+....+...+.|.++ |+++.+ +..|.+|.++..
T Consensus       276 ~~g~L~~~~~~~teg~~PR~F~i~~~g~~Liaa~q~sd~i~vf~~d~~  323 (346)
T COG2706         276 DGGKLELVGITPTEGQFPRDFNINPSGRFLIAANQKSDNITVFERDKE  323 (346)
T ss_pred             CCCEEEEEEEeccCCcCCccceeCCCCCEEEEEccCCCcEEEEEEcCC
Confidence            2       12223344578899999999 555554 456999987643

>KOG2041|consensus

Probab=98.04  E-value=8.5e-05  Score=78.72  Aligned_cols=206  Identities=10%  Similarity=0.072  Sum_probs=139.0

Q ss_pred             cccEEEEEEcCCCc-EEEEECCCcEEEEcCCC-------------------------------CCCCCCCCEEEEEECCC
Q psy7057          12 SMDVRSLSVTPDGC-ILSASRDKSAKLWKPND-------------------------------LSPGAKVNTLLSASWDM   59 (557)
Q Consensus        12 ~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~-------------------------------~~~~~~~~~l~sgs~Dg   59 (557)
                      .....|++|+...- ++.|+.||.+++-.+.+                               ..|+...+.|-+...+|
T Consensus        14 nvkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt~G   93 (1189)
T KOG2041|consen   14 NVKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDTSG   93 (1189)
T ss_pred             CceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCCCc
Confidence            35678999998654 89999999999998765                               44555566777888889


Q ss_pred             eEEEEECCCCeEEEE--EcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcEEEEEeCCCCCEEEEEEeCCCe-EEE
Q psy7057          60 TAKLWCLESQQCKLT--IRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTD-FVS  135 (557)
Q Consensus        60 ~i~iwd~~~~~~~~~--l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs  135 (557)
                      .|.+|-+-.+.-...  -...++.|.+++|..+| .|+..-.||.|.+=..+|..+.-..-.......+.|+++.+ ++.
T Consensus        94 lIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdGNRIwgKeLkg~~l~hv~ws~D~~~~Lf  173 (1189)
T KOG2041|consen   94 LIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDGNRIWGKELKGQLLAHVLWSEDLEQALF  173 (1189)
T ss_pred             eEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeeccceecchhcchheccceeecccHHHHHh
Confidence            999998766542211  12246778899999988 88888888888887766665543222222345788999976 456


Q ss_pred             EECCCeEEEEECCCC-------eEEEEE----eCCCCcEEEEEE----------cCCEEEEEeCCCeEEEEECCCC--ce
Q psy7057         136 CSNDASIRVWDSTTG-------KCVHTM----YGHPNFIYSVAA----------HGDLITSGGEDQCVCVYQNKAQ--NS  192 (557)
Q Consensus       136 ~s~Dg~I~vwd~~~~-------~~~~~~----~~h~~~V~~l~~----------~~~~l~s~s~Dg~I~iwd~~~~--~~  192 (557)
                      +-..|.+.++|.+..       .+.-..    ...+..|..+.|          +-..|+.|-..|.+.+-.....  -.
T Consensus       174 ~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~g~~~~v~pdrP~lavcy~nGr~QiMR~eND~~Pv  253 (1189)
T KOG2041|consen  174 KKANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNTGPYQPVPPDRPRLAVCYANGRMQIMRSENDPEPV  253 (1189)
T ss_pred             hhcCCcEEEecccccHHHhhhhceEEeeeeeecCCCccccceeeccCccccCCCCCCEEEEEEcCceehhhhhcCCCCCe
Confidence            777799999996521       121111    122333555655          2237889999998888763322  22


Q ss_pred             EeeCCccEEEEEEcCCCc-EEEEEcC
Q psy7057         193 FMIPAMSVWAVAILPNSD-IVTGSSD  217 (557)
Q Consensus       193 ~~~~~~~v~~v~~~p~g~-l~sg~~D  217 (557)
                      +......+....|+++|. ++.+|.+
T Consensus       254 v~dtgm~~vgakWnh~G~vLAvcG~~  279 (1189)
T KOG2041|consen  254 VVDTGMKIVGAKWNHNGAVLAVCGND  279 (1189)
T ss_pred             EEecccEeecceecCCCcEEEEccCc
Confidence            222335788899999999 6777764

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=98.01  E-value=1.3e-05  Score=77.03  Aligned_cols=157  Identities=22%  Similarity=0.345  Sum_probs=107.3

Q ss_pred             cEEEEEeccCc------------ccEEEEEEcCCC-c--EEEEECCCcEEEEcCCC------------------------
Q psy7057           2 YKLSTALYGHS------------MDVRSLSVTPDG-C--ILSASRDKSAKLWKPND------------------------   42 (557)
Q Consensus         2 ~kl~~~l~gH~------------~~V~~l~~spdg-~--l~sgs~Dg~V~iWd~~~------------------------   42 (557)
                      ||....+++|.            ..|..+.|..++ +  ++..+.|.+|++|.+..                        
T Consensus        63 ykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLlstNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~  142 (460)
T COG5170          63 YKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLLSTNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLT  142 (460)
T ss_pred             hhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEEecCCceeeeeeeecccchhhhccccccccccccCCCcC
Confidence            45556677775            457788887665 3  88889999999998764                        


Q ss_pred             -----------------------------------CCCCCCCCEEEEEECCCeEEEEECCCCe---EEEEEcccC-----
Q psy7057          43 -----------------------------------LSPGAKVNTLLSASWDMTAKLWCLESQQ---CKLTIRQHE-----   79 (557)
Q Consensus        43 -----------------------------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~---~~~~l~~h~-----   79 (557)
                                                         ++++.+...++++ .|-.|.+|+++-..   .+..++.|.     
T Consensus       143 s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~NsD~et~lSa-DdLrINLWnl~i~D~sFnIVDiKP~nmeeLt  221 (460)
T COG5170         143 STKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISFNSDKETLLSA-DDLRINLWNLEIIDGSFNIVDIKPHNMEELT  221 (460)
T ss_pred             CHHHhhcccccccceEEEeccceeccccceeEeeeeeecCchheeeec-cceeeeeccccccCCceEEEeccCccHHHHH
Confidence                                               3344444445543 46778899876432   233344553     


Q ss_pred             CcEEEEEEcCCC--EEEEEECCCeEEEEeCCCcEE-----EE------------EeCCCCCEEEEEEeCCCeEEEEECCC
Q psy7057          80 MAVWGVIQLANG--IIVTGCADKTIKLHSEEGEFL-----KT------------LTGHTDCVRGLAVLNDTDFVSCSNDA  140 (557)
Q Consensus        80 ~~V~~l~~~~~~--~l~sgs~dg~I~vwd~~~~~~-----~~------------l~~h~~~V~~l~~~~~~~lvs~s~Dg  140 (557)
                      ..|++..|+|..  .+.-.+..|.|++-|+....+     ..            +.+-...|..+.|+++|+++.+-.--
T Consensus       222 eVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdyl  301 (460)
T COG5170         222 EVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDYL  301 (460)
T ss_pred             HHHhhcccCHhHcceEEEecCCCcEEehhhhhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEeccc
Confidence            468888999955  777788899999998542211     11            12233578899999999987766668


Q ss_pred             eEEEEECCCC-eEEEEEeCC
Q psy7057         141 SIRVWDSTTG-KCVHTMYGH  159 (557)
Q Consensus       141 ~I~vwd~~~~-~~~~~~~~h  159 (557)
                      ++++||++.. .++.++.-|
T Consensus       302 tvkiwDvnm~k~pikTi~~h  321 (460)
T COG5170         302 TVKIWDVNMAKNPIKTIPMH  321 (460)
T ss_pred             eEEEEecccccCCceeechH
Confidence            9999998864 477777555

>KOG1645|consensus

Probab=98.01  E-value=0.00014  Score=72.55  Aligned_cols=235  Identities=15%  Similarity=0.186  Sum_probs=131.1

Q ss_pred             EEEeccCcccEEEEEEcCCCcEEEEECCCcEEEEcCCCCCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEE
Q psy7057           5 STALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWG   84 (557)
Q Consensus         5 ~~~l~gH~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~   84 (557)
                      .+-+.+|...|++++|||..                        ..++..++.+.+|+|.|+++..++..+..| ..+++
T Consensus       186 sq~lp~~g~~IrdlafSp~~------------------------~GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wS  240 (463)
T KOG1645|consen  186 SQILPGEGSFIRDLAFSPFN------------------------EGLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWS  240 (463)
T ss_pred             hhcccccchhhhhhccCccc------------------------cceeeeeccCceEEEEecccceeeeheecc-CCcee
Confidence            34455566666666666652                        336777888888999999998888888877 78999


Q ss_pred             EEEcCCC--EEEEEECCCeEEEEeCCC--cEEEEEeC--CCCCEEEEEEeC------CCeEEEEECCCeEEEEECCC---
Q psy7057          85 VIQLANG--IIVTGCADKTIKLHSEEG--EFLKTLTG--HTDCVRGLAVLN------DTDFVSCSNDASIRVWDSTT---  149 (557)
Q Consensus        85 l~~~~~~--~l~sgs~dg~I~vwd~~~--~~~~~l~~--h~~~V~~l~~~~------~~~lvs~s~Dg~I~vwd~~~---  149 (557)
                      ++|.-+.  .|..|-..|.|.+||...  .++..+.+  ...+|..++..+      .+.+++++.- -+..|.+..   
T Consensus       241 C~wDlde~h~IYaGl~nG~VlvyD~R~~~~~~~e~~a~~t~~pv~~i~~~~~n~~f~~gglLv~~lt-~l~f~ei~~s~~  319 (463)
T KOG1645|consen  241 CCWDLDERHVIYAGLQNGMVLVYDMRQPEGPLMELVANVTINPVHKIAPVQPNKIFTSGGLLVFALT-VLQFYEIVFSAE  319 (463)
T ss_pred             eeeccCCcceeEEeccCceEEEEEccCCCchHhhhhhhhccCcceeecccCccccccccceEEeeeh-hhhhhhhhcccc
Confidence            9998866  889999999999999432  22333322  234455554432      2334443322 245565432   


Q ss_pred             -CeEEEEEeCCCCcEEEEEEcC--C-EEEEEeCCC------eE----------EEEECCCC----ceEeeCCccEEEEEE
Q psy7057         150 -GKCVHTMYGHPNFIYSVAAHG--D-LITSGGEDQ------CV----------CVYQNKAQ----NSFMIPAMSVWAVAI  205 (557)
Q Consensus       150 -~~~~~~~~~h~~~V~~l~~~~--~-~l~s~s~Dg------~I----------~iwd~~~~----~~~~~~~~~v~~v~~  205 (557)
                       ..++..+ +..+...++++++  + .|++.-.+.      .|          .||..+..    ..-+.+  .-..+.-
T Consensus       320 ~~p~vlel-e~pG~cismqy~~~snh~l~tyRs~pn~p~~r~il~~~d~~dG~pVc~~r~~~~Gs~~~kl~--t~~ai~~  396 (463)
T KOG1645|consen  320 CLPCVLEL-EPPGICISMQYHGVSNHLLLTYRSNPNFPQSRFILGRIDFRDGFPVCGKRRTYFGSKQTKLS--TTQAIRA  396 (463)
T ss_pred             CCCccccc-CCCcceeeeeecCccceEEEEecCCCCCccceeeeeeeccccCceeeeecccccCCcccccc--cccceec
Confidence             1222222 2344555555533  2 344433311      01          11211100    000000  0111222


Q ss_pred             cCCCc--EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecC
Q psy7057         206 LPNSD--IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSAN  271 (557)
Q Consensus       206 ~p~g~--l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~  271 (557)
                      .++..  +..+.+.+.+.+||..+.........   ..++..++....+...++..=.|..++|+..+
T Consensus       397 ~~~nn~iv~~gd~tn~lil~D~~s~evvQ~l~~---~epv~Dicp~~~n~~syLa~LTd~~v~Iyk~e  461 (463)
T KOG1645|consen  397 VEDNNYIVVVGDSTNELILQDPHSFEVVQTLAL---SEPVLDICPNDTNGSSYLALLTDDRVHIYKNE  461 (463)
T ss_pred             cccccEEEEecCCcceeEEeccchhheeeeccc---CcceeecceeecCCcchhhheecceEEEEecC
Confidence            33334  44677788899999988766544333   25566666655555555666678888888754

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=98.00  E-value=0.0088  Score=59.42  Aligned_cols=231  Identities=12%  Similarity=0.098  Sum_probs=136.8

Q ss_pred             CCCCCCCCEEEEEECC---CeEEEEECCC--CeEEE--EEcccCCcEEEEEEcCCC-EEEEEE-CCCeEEEEeC--CCcE
Q psy7057          43 LSPGAKVNTLLSASWD---MTAKLWCLES--QQCKL--TIRQHEMAVWGVIQLANG-IIVTGC-ADKTIKLHSE--EGEF  111 (557)
Q Consensus        43 ~~~~~~~~~l~sgs~D---g~i~iwd~~~--~~~~~--~l~~h~~~V~~l~~~~~~-~l~sgs-~dg~I~vwd~--~~~~  111 (557)
                      +.++++.++|.++..+   |.|..|.++.  |+...  .......+.+.+++++++ .++++. ..|.|.++..  .|.+
T Consensus        45 l~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yvsvd~~g~~vf~AnY~~g~v~v~p~~~dG~l  124 (346)
T COG2706          45 LAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYVSVDEDGRFVFVANYHSGSVSVYPLQADGSL  124 (346)
T ss_pred             EEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEEEECCCCCEEEEEEccCceEEEEEcccCCcc
Confidence            6777888888887665   6677776654  54322  112223344889999999 555554 5678888873  2333


Q ss_pred             EE--EEeCCCCC----------EEEEEEeCCCeEE-EEE-CCCeEEEEECCCCeEEEEEe---CCCCcEEEEEE--cCCE
Q psy7057         112 LK--TLTGHTDC----------VRGLAVLNDTDFV-SCS-NDASIRVWDSTTGKCVHTMY---GHPNFIYSVAA--HGDL  172 (557)
Q Consensus       112 ~~--~l~~h~~~----------V~~l~~~~~~~lv-s~s-~Dg~I~vwd~~~~~~~~~~~---~h~~~V~~l~~--~~~~  172 (557)
                      ..  .+..|...          +.+..+.|+++++ ++. .--.|.+|++..|+....-.   .....-+.|.|  ++++
T Consensus       125 ~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~  204 (346)
T COG2706         125 QPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYDLDDGKLTPADPAEVKPGAGPRHIVFHPNGKY  204 (346)
T ss_pred             ccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEEEcccCccccccccccCCCCCcceEEEcCCCcE
Confidence            21  22234444          7888899999755 332 22459999998776432211   24566788999  5565


Q ss_pred             EE-EEeCCCeEEEEECCCC----ceEeeC---------CccEEEEEEcCCCcEEEEEc--CCcEEEEecCCCCc-chhHH
Q psy7057         173 IT-SGGEDQCVCVYQNKAQ----NSFMIP---------AMSVWAVAILPNSDIVTGSS--DGIVRVFSANPDRQ-AEDAV  235 (557)
Q Consensus       173 l~-s~s~Dg~I~iwd~~~~----~~~~~~---------~~~v~~v~~~p~g~l~sg~~--Dg~I~iwd~~~~~~-~~~~~  235 (557)
                      .. .+--+++|.+|.....    ..++.+         ......+.++|+|+++-+|+  ...|-+|.++.... +....
T Consensus       205 aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLYasNRg~dsI~~f~V~~~~g~L~~~~  284 (346)
T COG2706         205 AYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHISPDGRFLYASNRGHDSIAVFSVDPDGGKLELVG  284 (346)
T ss_pred             EEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeEEEECCCCCEEEEecCCCCeEEEEEEcCCCCEEEEEE
Confidence            44 4456889999985442    333221         12467788999999666665  44688888775422 11111


Q ss_pred             -HhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCC
Q psy7057         236 -QAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPD  273 (557)
Q Consensus       236 -~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~  273 (557)
                       .......-+...+.+.....+++.=.+..|.||.+++.
T Consensus       285 ~~~teg~~PR~F~i~~~g~~Liaa~q~sd~i~vf~~d~~  323 (346)
T COG2706         285 ITPTEGQFPRDFNINPSGRFLIAANQKSDNITVFERDKE  323 (346)
T ss_pred             EeccCCcCCccceeCCCCCEEEEEccCCCcEEEEEEcCC
Confidence             11111112334444554544444445567999988764

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=97.99  E-value=0.00081  Score=68.51  Aligned_cols=124  Identities=14%  Similarity=0.073  Sum_probs=97.8

Q ss_pred             ccCcccEEEEEEcCCCc-EEEEECCC-cEEEEcCCC---------------CCCCCCCCEEEEEECCCeEEEEECCCCeE
Q psy7057           9 YGHSMDVRSLSVTPDGC-ILSASRDK-SAKLWKPND---------------LSPGAKVNTLLSASWDMTAKLWCLESQQC   71 (557)
Q Consensus         9 ~gH~~~V~~l~~spdg~-l~sgs~Dg-~V~iWd~~~---------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~   71 (557)
                      -+|.+.|+-..+..++. ++.|..|| .+-|+|..+               +..++++..++.+.....+.+.|+++++.
T Consensus       356 v~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e~kr~e~~lg~I~av~vs~dGK~~vvaNdr~el~vididngnv  435 (668)
T COG4946         356 VGKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGEVKRIEKDLGNIEAVKVSPDGKKVVVANDRFELWVIDIDNGNV  435 (668)
T ss_pred             cCCCCceEEEEEccCCcceEEeccCCceEEEEecCCceEEEeeCCccceEEEEEcCCCcEEEEEcCceEEEEEEecCCCe
Confidence            36888899988888887 99999999 899999877               66778899999999999999999999987


Q ss_pred             EEEEcccCCcEEEEEEcCCC-EEEEEECC----CeEEEEeCCCcEEEEEeCCCCCEEEEEEeCCCe
Q psy7057          72 KLTIRQHEMAVWGVIQLANG-IIVTGCAD----KTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTD  132 (557)
Q Consensus        72 ~~~l~~h~~~V~~l~~~~~~-~l~sgs~d----g~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~~~  132 (557)
                      ...-+...+-|+...|+|++ .++-+--+    ..|+++|..+..+.........=.+-+|.|+++
T Consensus       436 ~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy~vTT~ta~DfsPaFD~d~r  501 (668)
T COG4946         436 RLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIYDVTTPTAYDFSPAFDPDGR  501 (668)
T ss_pred             eEecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCeEEEecCCcccccCcccCCCCc
Confidence            76666678889999999998 66655544    468999987766655544444444556677766

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=97.96  E-value=0.0085  Score=61.25  Aligned_cols=238  Identities=10%  Similarity=0.077  Sum_probs=138.9

Q ss_pred             CcEEEEcCCC--------------CCCCCCCCEEEEEEC----------CCeEEEEECCCCeEEEEEcccC-------Cc
Q psy7057          33 KSAKLWKPND--------------LSPGAKVNTLLSASW----------DMTAKLWCLESQQCKLTIRQHE-------MA   81 (557)
Q Consensus        33 g~V~iWd~~~--------------~~~~~~~~~l~sgs~----------Dg~i~iwd~~~~~~~~~l~~h~-------~~   81 (557)
                      ++|.+.|..+              ...+++++.|+.+..          +..|.+||+.+.+.+..+..-.       ..
T Consensus        27 ~~v~ViD~~~~~v~g~i~~G~~P~~~~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~~~  106 (352)
T TIGR02658        27 TQVYTIDGEAGRVLGMTDGGFLPNPVVASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVGTY  106 (352)
T ss_pred             ceEEEEECCCCEEEEEEEccCCCceeECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhccCc
Confidence            6777777665              236677888777665          7899999999999998886422       23


Q ss_pred             EEEEEEcCCC-EEEEEE-C-CCeEEEEeC-CCcEEEEEeCCCCCEEEEEEeCCCeEEEEECCCeEEEEECC-CCeEE-EE
Q psy7057          82 VWGVIQLANG-IIVTGC-A-DKTIKLHSE-EGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDST-TGKCV-HT  155 (557)
Q Consensus        82 V~~l~~~~~~-~l~sgs-~-dg~I~vwd~-~~~~~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~-~~~~~-~~  155 (557)
                      ...++++|+| .++... . +..+.+.|. +++.+..+.- .++..-... ++..+.+-+.||......+. +++.. .+
T Consensus       107 ~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~v-p~~~~vy~t-~e~~~~~~~~Dg~~~~v~~d~~g~~~~~~  184 (352)
T TIGR02658       107 PWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDV-PDCYHIFPT-ANDTFFMHCRDGSLAKVGYGTKGNPKIKP  184 (352)
T ss_pred             cceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeC-CCCcEEEEe-cCCccEEEeecCceEEEEecCCCceEEee
Confidence            3467889998 555444 3 788999994 4555555543 222222222 22333344455554443322 22211 11


Q ss_pred             ---EeCCCCcEE---EEEE-cCCEEEEEeCCCeEEEEECCCC-----ceEee----------CCccEEEEEEcCCCc-EE
Q psy7057         156 ---MYGHPNFIY---SVAA-HGDLITSGGEDQCVCVYQNKAQ-----NSFMI----------PAMSVWAVAILPNSD-IV  212 (557)
Q Consensus       156 ---~~~h~~~V~---~l~~-~~~~l~s~s~Dg~I~iwd~~~~-----~~~~~----------~~~~v~~v~~~p~g~-l~  212 (557)
                         +.+-..++.   .... ++.+++...+ |+|.+.|+...     ..+..          ......-++++|+++ ++
T Consensus       185 ~~vf~~~~~~v~~rP~~~~~dg~~~~vs~e-G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~ly  263 (352)
T TIGR02658       185 TEVFHPEDEYLINHPAYSNKSGRLVWPTYT-GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIY  263 (352)
T ss_pred             eeeecCCccccccCCceEcCCCcEEEEecC-CeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCCCCEEE
Confidence               111001100   1223 6777777766 99999995332     22211          112233499999987 44


Q ss_pred             EEE----------cCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCc-eeEEEEeCCCcEEEEecCCChhh
Q psy7057         213 TGS----------SDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQE-IGGVKVSDDGIVRVFSANPDRQA  276 (557)
Q Consensus       213 sg~----------~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~~~vs~s~DG~IrvW~~~~~~~~  276 (557)
                      +..          ..+.|.++|..+.+.......   ......+...++.. ...++...++.|.|.|....+..
T Consensus       264 V~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~v---G~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~t~k~i  335 (352)
T TIGR02658       264 LLADQRAKWTHKTASRFLFVVDAKTGKRLRKIEL---GHEIDSINVSQDAKPLLYALSTGDKTLYIFDAETGKEL  335 (352)
T ss_pred             EEecCCccccccCCCCEEEEEECCCCeEEEEEeC---CCceeeEEECCCCCeEEEEeCCCCCcEEEEECcCCeEE
Confidence            422          125799999888766543332   23456677777776 44445557888999998776443

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>PRK04043 tolB translocation protein TolB; Provisional

Probab=97.92  E-value=0.004  Score=65.82  Aligned_cols=199  Identities=12%  Similarity=0.033  Sum_probs=115.2

Q ss_pred             EEEEECCCc-EEEEcCCC----CCCCCCCCE-EEEEECC---CeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC--EEE
Q psy7057          26 ILSASRDKS-AKLWKPND----LSPGAKVNT-LLSASWD---MTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG--IIV   94 (557)
Q Consensus        26 l~sgs~Dg~-V~iWd~~~----~~~~~~~~~-l~sgs~D---g~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~--~l~   94 (557)
                      |..+..||. .+.+-...    ..++|+++. ++..+.+   ..|.++|+.+++...... ......+..|+|+|  +++
T Consensus       171 l~~~d~dg~~~~~~~~~~~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~-~~g~~~~~~~SPDG~~la~  249 (419)
T PRK04043        171 IVLADYTLTYQKVIVKGGLNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIAS-SQGMLVVSDVSKDGSKLLL  249 (419)
T ss_pred             EEEECCCCCceeEEccCCCeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEec-CCCcEEeeEECCCCCEEEE
Confidence            666666665 44343222    456777874 5544443   568889998876544333 45556678899998  444


Q ss_pred             EEECC--CeEEEEeCCCcEEEEEeCCCCCEEEEEEeCCCe-EE-EEECCC--eEEEEECCCCeEEEEEeCCCCcEEEEEE
Q psy7057          95 TGCAD--KTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTD-FV-SCSNDA--SIRVWDSTTGKCVHTMYGHPNFIYSVAA  168 (557)
Q Consensus        95 sgs~d--g~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~~~-lv-s~s~Dg--~I~vwd~~~~~~~~~~~~h~~~V~~l~~  168 (557)
                      +.+.+  ..|.+++..+.....+..+........|+|+|+ ++ +....+  .|.+.|+.+++..+.... ......++.
T Consensus       250 ~~~~~g~~~Iy~~dl~~g~~~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt~~-g~~~~~~SP  328 (419)
T PRK04043        250 TMAPKGQPDIYLYDTNTKTLTQITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQVVFH-GKNNSSVST  328 (419)
T ss_pred             EEccCCCcEEEEEECCCCcEEEcccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEeCccC-CCcCceECC
Confidence            45444  457777766655666655554344568999986 54 333333  577888887766433321 112224444


Q ss_pred             cCCEEEEEeCC---------CeEEEEECCCC--ceEeeCCccEEEEEEcCCCc-EEEEE-cCCc--EEEEecCC
Q psy7057         169 HGDLITSGGED---------QCVCVYQNKAQ--NSFMIPAMSVWAVAILPNSD-IVTGS-SDGI--VRVFSANP  227 (557)
Q Consensus       169 ~~~~l~s~s~D---------g~I~iwd~~~~--~~~~~~~~~v~~v~~~p~g~-l~sg~-~Dg~--I~iwd~~~  227 (557)
                      +|+.|+-.+..         ..|.+.|+...  +.+... .......|+|||+ ++..+ ..+.  +.+.+++.
T Consensus       329 DG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~~~LT~~-~~~~~p~~SPDG~~I~f~~~~~~~~~L~~~~l~g  401 (419)
T PRK04043        329 YKNYIVYSSRETNNEFGKNTFNLYLISTNSDYIRRLTAN-GVNQFPRFSSDGGSIMFIKYLGNQSALGIIRLNY  401 (419)
T ss_pred             CCCEEEEEEcCCCcccCCCCcEEEEEECCCCCeEECCCC-CCcCCeEECCCCCEEEEEEccCCcEEEEEEecCC
Confidence            88876655433         36777786554  333322 2333588999998 44333 2233  55555554

>KOG2066|consensus

Probab=97.87  E-value=0.00063  Score=73.55  Aligned_cols=165  Identities=16%  Similarity=0.173  Sum_probs=116.5

Q ss_pred             CCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEE
Q psy7057          49 VNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLA  126 (557)
Q Consensus        49 ~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~  126 (557)
                      ...++-|+.+|.|++.+... .+ .+...|...      .-+| .++|+|.||++.|.. .+.+...++. ...++.+++
T Consensus        49 ~~~~~~GtH~g~v~~~~~~~-~~-~~~~~~s~~------~~~Gey~asCS~DGkv~I~sl~~~~~~~~~d-f~rpiksia  119 (846)
T KOG2066|consen   49 DKFFALGTHRGAVYLTTCQG-NP-KTNFDHSSS------ILEGEYVASCSDDGKVVIGSLFTDDEITQYD-FKRPIKSIA  119 (846)
T ss_pred             cceeeeccccceEEEEecCC-cc-ccccccccc------ccCCceEEEecCCCcEEEeeccCCccceeEe-cCCcceeEE
Confidence            67899999999999998654 33 444445443      3456 999999999999987 3444444333 456899999


Q ss_pred             EeCC------CeEEEEECCCeEEEEECC---CCeEEEEEeCCCCcEEEEEEcCCEEEEEeCCCeEEEEECCCCceEee--
Q psy7057         127 VLND------TDFVSCSNDASIRVWDST---TGKCVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQNSFMI--  195 (557)
Q Consensus       127 ~~~~------~~lvs~s~Dg~I~vwd~~---~~~~~~~~~~h~~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~--  195 (557)
                      ++|+      .+|++|+.-| +.++.-+   ....+ .+..-.++|.+++|.|++++=++.+| |++||+...+.+..  
T Consensus       120 l~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v-~l~~~eG~I~~i~W~g~lIAWand~G-v~vyd~~~~~~l~~i~  196 (846)
T KOG2066|consen  120 LHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSV-VLSEGEGPIHSIKWRGNLIAWANDDG-VKVYDTPTRQRLTNIP  196 (846)
T ss_pred             eccchhhhhhhheeecCcce-EEEehhhhhcCccce-eeecCccceEEEEecCcEEEEecCCC-cEEEeccccceeeccC
Confidence            9998      4599999888 7776522   11222 34556789999999999888887776 89999776644322  


Q ss_pred             -------CCccEEEEEEcCCCcEEEEEcCCcEEEEecC
Q psy7057         196 -------PAMSVWAVAILPNSDIVTGSSDGIVRVFSAN  226 (557)
Q Consensus       196 -------~~~~v~~v~~~p~g~l~sg~~Dg~I~iwd~~  226 (557)
                             +......+.|.++.+++.|=. .+|+|..++
T Consensus       197 ~p~~~~R~e~fpphl~W~~~~~LVIGW~-d~v~i~~I~  233 (846)
T KOG2066|consen  197 PPSQSVRPELFPPHLHWQDEDRLVIGWG-DSVKICSIK  233 (846)
T ss_pred             CCCCCCCcccCCCceEecCCCeEEEecC-CeEEEEEEe
Confidence                   122345788888877766544 468888887

>KOG0882|consensus

Probab=97.85  E-value=0.00012  Score=73.86  Aligned_cols=197  Identities=16%  Similarity=0.113  Sum_probs=126.1

Q ss_pred             CcccEEEEEEcCCCcEEEEECCCcEEEEcCCCCCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCC
Q psy7057          11 HSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLAN   90 (557)
Q Consensus        11 H~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~   90 (557)
                      |.+.|+.+..+...-+++++.||.++.|....+                       ..-+.+..+..|...|.+++.+.+
T Consensus         8 hrd~i~hv~~tka~fiiqASlDGh~KFWkKs~i-----------------------sGvEfVKhFraHL~~I~sl~~S~d   64 (558)
T KOG0882|consen    8 HRDVITHVFPTKAKFIIQASLDGHKKFWKKSRI-----------------------SGVEFVKHFRAHLGVILSLAVSYD   64 (558)
T ss_pred             ccceeeeEeeehhheEEeeecchhhhhcCCCCc-----------------------cceeehhhhHHHHHHHHhhhcccc
Confidence            667777665544322455555555555532110                       011455667788999999999999


Q ss_pred             C-EEEEEEC-CCeEEEEeCCC-cEE--EEEeCCCCCEEEEEEeCCC---eEE-EEECCCeEEEEECCCCe--EEEEEeCC
Q psy7057          91 G-IIVTGCA-DKTIKLHSEEG-EFL--KTLTGHTDCVRGLAVLNDT---DFV-SCSNDASIRVWDSTTGK--CVHTMYGH  159 (557)
Q Consensus        91 ~-~l~sgs~-dg~I~vwd~~~-~~~--~~l~~h~~~V~~l~~~~~~---~lv-s~s~Dg~I~vwd~~~~~--~~~~~~~h  159 (557)
                      + ++.|.+. |..++++|... ..+  ..+.--.+.+..+ .++..   .++ +.-.++.|.++|-....  ....-.-|
T Consensus        65 g~L~~Sv~d~Dhs~KvfDvEn~DminmiKL~~lPg~a~wv-~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkklH  143 (558)
T KOG0882|consen   65 GWLFRSVEDPDHSVKVFDVENFDMINMIKLVDLPGFAEWV-TSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKKLH  143 (558)
T ss_pred             ceeEeeccCcccceeEEEeeccchhhhcccccCCCceEEe-cCCCCeeeeEEeecccCCCcEEECCcCCcCccceecccc
Confidence            9 7788777 99999999432 222  1222122222222 12221   233 44467889999966443  22333458


Q ss_pred             CCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC-c--------eE---------eeCCccEEEEEEcCCCc-EEEEEcCC
Q psy7057         160 PNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ-N--------SF---------MIPAMSVWAVAILPNSD-IVTGSSDG  218 (557)
Q Consensus       160 ~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~-~--------~~---------~~~~~~v~~v~~~p~g~-l~sg~~Dg  218 (557)
                      ..+|.++.+  .++.+++....|.|..|..... +        .+         ........++.|+|++. +.+-+.|.
T Consensus       144 ~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~Dr  223 (558)
T KOG0882|consen  144 FSPVKKIRYNQAGDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLNPDR  223 (558)
T ss_pred             cCceEEEEeeccccceeeccccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEccccCcccccCccc
Confidence            999999988  5678889999999999986521 1        01         11223568999999998 88888999


Q ss_pred             cEEEEecCCCCcc
Q psy7057         219 IVRVFSANPDRQA  231 (557)
Q Consensus       219 ~I~iwd~~~~~~~  231 (557)
                      .||++...+++..
T Consensus       224 kVR~F~~KtGklv  236 (558)
T KOG0882|consen  224 KVRGFVFKTGKLV  236 (558)
T ss_pred             EEEEEEeccchhh
Confidence            9999999987654

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=97.81  E-value=0.0042  Score=59.92  Aligned_cols=166  Identities=11%  Similarity=0.121  Sum_probs=93.8

Q ss_pred             EEEEEEcCCCc-EEEEECCCcEEEEcCCC-------------------------CCCCCC---CCEEEEEECCCeEEEEE
Q psy7057          15 VRSLSVTPDGC-ILSASRDKSAKLWKPND-------------------------LSPGAK---VNTLLSASWDMTAKLWC   65 (557)
Q Consensus        15 V~~l~~spdg~-l~sgs~Dg~V~iWd~~~-------------------------~~~~~~---~~~l~sgs~Dg~i~iwd   65 (557)
                      =+.++||||+. ||.+...|+|+++|+..                         +.....   ...|+.-..+|.++-|-
T Consensus        46 WRkl~WSpD~tlLa~a~S~G~i~vfdl~g~~lf~I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~  125 (282)
T PF15492_consen   46 WRKLAWSPDCTLLAYAESTGTIRVFDLMGSELFVIPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYL  125 (282)
T ss_pred             heEEEECCCCcEEEEEcCCCeEEEEecccceeEEcCcccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEE
Confidence            46789999999 77899999999999875                         111101   22466666777777666


Q ss_pred             CCC-----CeEEEEE--cc-cCCcEEEEEEcCCC-EEEEEE-CCCeEEEEeCCCcEEEEEeCCCCCEEEEEEeCC---Ce
Q psy7057          66 LES-----QQCKLTI--RQ-HEMAVWGVIQLANG-IIVTGC-ADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLND---TD  132 (557)
Q Consensus        66 ~~~-----~~~~~~l--~~-h~~~V~~l~~~~~~-~l~sgs-~dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~---~~  132 (557)
                      +..     .+..+++  .. +...|.++.++|.. +|+.|+ ....-..+          +.....+++-.+..+   -+
T Consensus       126 vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h~LLlVgG~~~~~~~~s----------~a~~~GLtaWRiL~~~Pyyk  195 (282)
T PF15492_consen  126 VSVGTNQGYQENHSFSFSSHYPHGINSAVYHPKHRLLLVGGCEQNQDGMS----------KASSCGLTAWRILSDSPYYK  195 (282)
T ss_pred             EEcccCCcceeeEEEEecccCCCceeEEEEcCCCCEEEEeccCCCCCccc----------cccccCceEEEEcCCCCcEE
Confidence            422     2233333  33 37789999999986 444444 33321111          011122222222211   22


Q ss_pred             EEEEECCCe------EEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC
Q psy7057         133 FVSCSNDAS------IRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ  190 (557)
Q Consensus       133 lvs~s~Dg~------I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~  190 (557)
                      .++...|..      -.+|.+-+.+...........|..|+.  +|..|++...+|.|.+|++..+
T Consensus       196 ~v~~~~~~~~~~~~~~~~~~~~~~~~fs~~~~~~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL  261 (282)
T PF15492_consen  196 QVTSSEDDITASSKRRGLLRIPSFKFFSRQGQEQDGIFKMSLSPDGSLLACIHFSGSLSLWEIPSL  261 (282)
T ss_pred             EccccCccccccccccceeeccceeeeeccccCCCceEEEEECCCCCEEEEEEcCCeEEEEecCcc
Confidence            222222221      123333322222211224567777766  8899999999999999997665

>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=97.81  E-value=0.0015  Score=69.12  Aligned_cols=209  Identities=14%  Similarity=0.136  Sum_probs=117.1

Q ss_pred             CcccEEEEEEcCCCcEEEEECCCcEEEEcCCC-----------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccC
Q psy7057          11 HSMDVRSLSVTPDGCILSASRDKSAKLWKPND-----------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHE   79 (557)
Q Consensus        11 H~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~-----------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~   79 (557)
                      ..-....+.++|+|++++.+.||.-.|+....           +.|.. .+.+++-....+|.|+.--+.+....+.. .
T Consensus        31 ~~~~p~~ls~npngr~v~V~g~geY~iyt~~~~r~k~~G~g~~~vw~~-~n~yAv~~~~~~I~I~kn~~~~~~k~i~~-~  108 (443)
T PF04053_consen   31 CEIYPQSLSHNPNGRFVLVCGDGEYEIYTALAWRNKAFGSGLSFVWSS-RNRYAVLESSSTIKIYKNFKNEVVKSIKL-P  108 (443)
T ss_dssp             -SS--SEEEE-TTSSEEEEEETTEEEEEETTTTEEEEEEE-SEEEE-T-SSEEEEE-TTS-EEEEETTEE-TT------S
T ss_pred             CCcCCeeEEECCCCCEEEEEcCCEEEEEEccCCcccccCceeEEEEec-CccEEEEECCCeEEEEEcCccccceEEcC-C
Confidence            44457889999999977779999999998544           44554 45577777788888864222222123322 1


Q ss_pred             CcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCeEEEEECCCeEEEEECCCC-------
Q psy7057          80 MAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTG-------  150 (557)
Q Consensus        80 ~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~-------  150 (557)
                      ..+..+..   | +|+..+ ++.|.+|| .+++.++.+...  +|..+.|++++.+++-..+.++.+++....       
T Consensus       109 ~~~~~If~---G~LL~~~~-~~~i~~yDw~~~~~i~~i~v~--~vk~V~Ws~~g~~val~t~~~i~il~~~~~~~~~~~~  182 (443)
T PF04053_consen  109 FSVEKIFG---GNLLGVKS-SDFICFYDWETGKLIRRIDVS--AVKYVIWSDDGELVALVTKDSIYILKYNLEAVAAIPE  182 (443)
T ss_dssp             S-EEEEE----SSSEEEEE-TTEEEEE-TTT--EEEEESS---E-EEEEE-TTSSEEEEE-S-SEEEEEE-HHHHHHBTT
T ss_pred             cccceEEc---CcEEEEEC-CCCEEEEEhhHcceeeEEecC--CCcEEEEECCCCEEEEEeCCeEEEEEecchhcccccc
Confidence            23444443   6 444444 44899999 557777777633  489999999988765555667888774322       


Q ss_pred             ----eEEEEEeCCCCcEEEEEEcCCEEEEEeCCCeEEEEECCCCceEeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEec
Q psy7057         151 ----KCVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSA  225 (557)
Q Consensus       151 ----~~~~~~~~h~~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~  225 (557)
                          .....+......|.+.+|.++.++-.+.. .|+.+-.+....+.....+++-+.+.|... +.....|+.|..+.+
T Consensus       183 ~g~e~~f~~~~E~~~~IkSg~W~~d~fiYtT~~-~lkYl~~Ge~~~i~~ld~~~yllgy~~~~~~ly~~Dr~~~v~~~~l  261 (443)
T PF04053_consen  183 EGVEDAFELIHEISERIKSGCWVEDCFIYTTSN-HLKYLVNGETGIIAHLDKPLYLLGYLPKENRLYLIDRDGNVISYEL  261 (443)
T ss_dssp             TB-GGGEEEEEEE-S--SEEEEETTEEEEE-TT-EEEEEETTEEEEEEE-SS--EEEEEETTTTEEEEE-TT--EEEEE-
T ss_pred             cCchhceEEEEEecceeEEEEEEcCEEEEEcCC-eEEEEEcCCcceEEEcCCceEEEEEEccCCEEEEEECCCCEEEEEE
Confidence                03333332367888999977765555554 787766555567777777888888888554 778889999999988


Q ss_pred             CCC
Q psy7057         226 NPD  228 (557)
Q Consensus       226 ~~~  228 (557)
                      +..
T Consensus       262 d~~  264 (443)
T PF04053_consen  262 DLS  264 (443)
T ss_dssp             -HH
T ss_pred             CHH
Confidence            754

This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.

>KOG0882|consensus

Probab=97.74  E-value=0.00036  Score=70.63  Aligned_cols=200  Identities=20%  Similarity=0.214  Sum_probs=134.2

Q ss_pred             cCCcEEEEEEcCCCEEEEEECCCeEEEEeCCC----cEEEEEeCCCCCEEEEEEeCCCeEE-EEEC-CCeEEEEECCCCe
Q psy7057          78 HEMAVWGVIQLANGIIVTGCADKTIKLHSEEG----EFLKTLTGHTDCVRGLAVLNDTDFV-SCSN-DASIRVWDSTTGK  151 (557)
Q Consensus        78 h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~~~----~~~~~l~~h~~~V~~l~~~~~~~lv-s~s~-Dg~I~vwd~~~~~  151 (557)
                      |.+.|+.+.......+++++.||.++.|-...    +.+..+..|-..|.+++.+-++.+. |.+. |..++++|+.+-.
T Consensus         8 hrd~i~hv~~tka~fiiqASlDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn~D   87 (558)
T KOG0882|consen    8 HRDVITHVFPTKAKFIIQASLDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVENFD   87 (558)
T ss_pred             ccceeeeEeeehhheEEeeecchhhhhcCCCCccceeehhhhHHHHHHHHhhhccccceeEeeccCcccceeEEEeeccc
Confidence            78888888877777999999999999998443    2345566788889999999888744 7676 9999999987655


Q ss_pred             EEEEE--eCCCCcEEEEEEcCC---EEE-EEeCCCeEEEEECCCC-----ceEeeCCccEEEEEEcCCCc-EEEEEcCCc
Q psy7057         152 CVHTM--YGHPNFIYSVAAHGD---LIT-SGGEDQCVCVYQNKAQ-----NSFMIPAMSVWAVAILPNSD-IVTGSSDGI  219 (557)
Q Consensus       152 ~~~~~--~~h~~~V~~l~~~~~---~l~-s~s~Dg~I~iwd~~~~-----~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~  219 (557)
                      .+.-+  .--++.+..+...|.   .++ +.-.++.+.++|....     ..-..|..+|..+.+++-++ +++....|.
T Consensus        88 minmiKL~~lPg~a~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vSiD~~gm  167 (558)
T KOG0882|consen   88 MINMIKLVDLPGFAEWVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVSIDISGM  167 (558)
T ss_pred             hhhhcccccCCCceEEecCCCCeeeeEEeecccCCCcEEECCcCCcCccceecccccCceEEEEeeccccceeeccccce
Confidence            44222  223444444443342   233 3447789999994322     33456888999999999999 778888999


Q ss_pred             EEEEecCCCCc-ch-----hHHH-------hcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCChhhHH
Q psy7057         220 VRVFSANPDRQ-AE-----DAVQ-------AQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQAED  278 (557)
Q Consensus       220 I~iwd~~~~~~-~~-----~~~~-------~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~~~~~~  278 (557)
                      |.-|.....-+ ..     ....       ........++.+.+... .+.+-+.|..||++...+++.+.+
T Consensus       168 VEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~-qistl~~DrkVR~F~~KtGklvqe  238 (558)
T KOG0882|consen  168 VEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGA-QISTLNPDRKVRGFVFKTGKLVQE  238 (558)
T ss_pred             eEeecCCCcccCccccccccccccchhhcccccccCccceEEccccC-cccccCcccEEEEEEeccchhhhh
Confidence            99999874111 00     0000       11112223333333322 245556999999999999877643

>KOG2314|consensus

Probab=97.70  E-value=0.014  Score=60.93  Aligned_cols=213  Identities=10%  Similarity=0.081  Sum_probs=120.9

Q ss_pred             ccEEEEEEcCCCc-EEEEEC-----------CCcEEEEcCCC-------------------CCCCCCCCEEEEEECCCeE
Q psy7057          13 MDVRSLSVTPDGC-ILSASR-----------DKSAKLWKPND-------------------LSPGAKVNTLLSASWDMTA   61 (557)
Q Consensus        13 ~~V~~l~~spdg~-l~sgs~-----------Dg~V~iWd~~~-------------------~~~~~~~~~l~sgs~Dg~i   61 (557)
                      -.|.-+.|||..+ |+|=|.           ...++|||+.+                   +.++.+..+++.-.. .+|
T Consensus       250 p~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~-~si  328 (698)
T KOG2314|consen  250 PGVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTG-NSI  328 (698)
T ss_pred             CCceeeecCCccceEEEecCCccccCcccCCCceEEEEEccccchhcceeccCCCccccceEEeccCCceeEEecc-ceE
Confidence            3678899999988 776542           25799999987                   556667777776665 578


Q ss_pred             EEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEEC--C---CeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCeEE
Q psy7057          62 KLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCA--D---KTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTDFV  134 (557)
Q Consensus        62 ~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~--d---g~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~lv  134 (557)
                      .|++..+..++-.-.-.-..|....|+|.+ +|+--+.  +   ..+.+-. .+++.+++..-|.-.=+.|.|-.+|.++
T Consensus       329 sIyEtpsf~lld~Kslki~gIr~FswsP~~~llAYwtpe~~~~parvtL~evPs~~~iRt~nlfnVsDckLhWQk~gdyL  408 (698)
T KOG2314|consen  329 SIYETPSFMLLDKKSLKISGIRDFSWSPTSNLLAYWTPETNNIPARVTLMEVPSKREIRTKNLFNVSDCKLHWQKSGDYL  408 (698)
T ss_pred             EEEecCceeeecccccCCccccCcccCCCcceEEEEcccccCCcceEEEEecCccceeeeccceeeeccEEEeccCCcEE
Confidence            899876533322111123567777888876 3332111  1   1122333 2333444433343333445555556555


Q ss_pred             EEECC-----------CeEEEEECCCCe-EEEEEeCCCCcEEEEEE--cCCEEEEEe---CCCeEEEEECCCC----c-e
Q psy7057         135 SCSND-----------ASIRVWDSTTGK-CVHTMYGHPNFIYSVAA--HGDLITSGG---EDQCVCVYQNKAQ----N-S  192 (557)
Q Consensus       135 s~s~D-----------g~I~vwd~~~~~-~~~~~~~h~~~V~~l~~--~~~~l~s~s---~Dg~I~iwd~~~~----~-~  192 (557)
                      +.--|           ..+-|+.++... ++... .-...|...+|  .|+.+++-+   ...++.+|...+.    . .
T Consensus       409 cvkvdR~tK~~~~g~f~n~eIfrireKdIpve~v-elke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~lV  487 (698)
T KOG2314|consen  409 CVKVDRHTKSKVKGQFSNLEIFRIREKDIPVEVV-ELKESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKKPSLV  487 (698)
T ss_pred             EEEEEeeccccccceEeeEEEEEeeccCCCceee-ecchheeeeeeccCCCeEEEEEccccccceeEEEeecCCCchhhh
Confidence            43222           123344444332 22222 24567778888  666554433   2357888875522    1 1


Q ss_pred             EeeCCccEEEEEEcCCCc-EEE---EEcCCcEEEEecCC
Q psy7057         193 FMIPAMSVWAVAILPNSD-IVT---GSSDGIVRVFSANP  227 (557)
Q Consensus       193 ~~~~~~~v~~v~~~p~g~-l~s---g~~Dg~I~iwd~~~  227 (557)
                      ........+.+.|+|.|+ ++.   +|..|.+..+|..-
T Consensus       488 k~~dk~~~N~vfwsPkG~fvvva~l~s~~g~l~F~D~~~  526 (698)
T KOG2314|consen  488 KELDKKFANTVFWSPKGRFVVVAALVSRRGDLEFYDTDY  526 (698)
T ss_pred             hhhcccccceEEEcCCCcEEEEEEecccccceEEEecch
Confidence            122335678999999999 332   34578899999874

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=97.63  E-value=0.013  Score=61.20  Aligned_cols=210  Identities=16%  Similarity=0.213  Sum_probs=119.4

Q ss_pred             cEEEEEEcCCCc-EEEEECCCcEEEEcCCC--------------------------------------------------
Q psy7057          14 DVRSLSVTPDGC-ILSASRDKSAKLWKPND--------------------------------------------------   42 (557)
Q Consensus        14 ~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~--------------------------------------------------   42 (557)
                      .|+++.|.++.. |+.|-..|.|.||.+..                                                  
T Consensus         3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~   82 (395)
T PF08596_consen    3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLL   82 (395)
T ss_dssp             -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE
T ss_pred             eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhhe
Confidence            588999999855 99999999999986432                                                  


Q ss_pred             ---------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEE--cc------cCCcEEEEEEcC-----CC----EEEEE
Q psy7057          43 ---------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTI--RQ------HEMAVWGVIQLA-----NG----IIVTG   96 (557)
Q Consensus        43 ---------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l--~~------h~~~V~~l~~~~-----~~----~l~sg   96 (557)
                               ++. .+-.+++.|..+|++.|.|++....+..-  ..      ....|+++.|.-     ++    .+++|
T Consensus        83 ~~~~g~vtal~~-S~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vG  161 (395)
T PF08596_consen   83 DAKQGPVTALKN-SDIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVG  161 (395)
T ss_dssp             ---S-SEEEEEE--BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEEE
T ss_pred             eccCCcEeEEec-CCCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEEE
Confidence                     111 13467899999999999999887777652  22      234678887763     33    78999


Q ss_pred             ECCCeEEEEeC----CCcE----EEEEeCCCCCEEEEEEe-CC---------------------CeEEEEECCCeEEEEE
Q psy7057          97 CADKTIKLHSE----EGEF----LKTLTGHTDCVRGLAVL-ND---------------------TDFVSCSNDASIRVWD  146 (557)
Q Consensus        97 s~dg~I~vwd~----~~~~----~~~l~~h~~~V~~l~~~-~~---------------------~~lvs~s~Dg~I~vwd  146 (557)
                      ...|.+.+|.+    .+..    ......+.++|..|... .+                     ..++....+..+|++.
T Consensus       162 Tn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~vVvvSe~~irv~~  241 (395)
T PF08596_consen  162 TNSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPGYVVVVSESDIRVFK  241 (395)
T ss_dssp             ETTSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----EEEEEE-SSEEEEE-
T ss_pred             eCCCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCcEEEEEcccceEEEe
Confidence            99999999972    1221    12223466777666532 11                     1255556678899999


Q ss_pred             CCCCeEEEEEeCCCCcEEEEEE-------cCCEEEEEeCCCeEEEEECCCCceEee---CC----ccEEEEEEcCCCcEE
Q psy7057         147 STTGKCVHTMYGHPNFIYSVAA-------HGDLITSGGEDQCVCVYQNKAQNSFMI---PA----MSVWAVAILPNSDIV  212 (557)
Q Consensus       147 ~~~~~~~~~~~~h~~~V~~l~~-------~~~~l~s~s~Dg~I~iwd~~~~~~~~~---~~----~~v~~v~~~p~g~l~  212 (557)
                      ..+.+..+......-....+++       .+..|++-..+|.|++|.+...+.+..   +.    ..+...+++++|+++
T Consensus       242 ~~~~k~~~K~~~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lkei~~~~l~~~~d~~~~~~ssis~~Gdi~  321 (395)
T PF08596_consen  242 PPKSKGAHKSFDDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLKEIKSVSLPPPLDSRRLSSSSISRNGDIF  321 (395)
T ss_dssp             TT---EEEEE-SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--EEEEEE-SS---HHHHTT-EE-TTS-EE
T ss_pred             CCCCcccceeeccccccceEEEEeecccCCceEEEEEECCCcEEEEECCCchHhhcccCCCccccccccccEECCCCCEE
Confidence            8887776665533222223333       344788889999999999877744422   21    123445567777744


Q ss_pred             EEEcCCcEEEEe
Q psy7057         213 TGSSDGIVRVFS  224 (557)
Q Consensus       213 sg~~Dg~I~iwd  224 (557)
                      .-.....+.++.
T Consensus       322 ~~~gpsE~~l~s  333 (395)
T PF08596_consen  322 YWTGPSEIQLFS  333 (395)
T ss_dssp             EE-SSSEEEEEE
T ss_pred             EEeCcccEEEEE
Confidence            444444444444

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>KOG4649|consensus

Probab=97.63  E-value=0.027  Score=53.73  Aligned_cols=79  Identities=5%  Similarity=-0.047  Sum_probs=54.4

Q ss_pred             EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcC
Q psy7057          26 ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLA   89 (557)
Q Consensus        26 l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~   89 (557)
                      ++.|+..|.+.+-+.++                -..++++..+..|+.|++....|..+..++...+-......+-+..+
T Consensus        66 VV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk~~a~~d~~~glIycgshd~~~yalD~~~~~cVykskcgG~~f~sP~i~~  145 (354)
T KOG4649|consen   66 VVLGCYSGGLYFLCVKTGSQIWNFVILETVKVRAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSKCGGGTFVSPVIAP  145 (354)
T ss_pred             EEEEEccCcEEEEEecchhheeeeeehhhhccceEEcCCCceEEEecCCCcEEEecccccceEEecccCCceeccceecC
Confidence            56788899888877665                23455689999999999999999999988888764443333333444


Q ss_pred             -CCEEEEEECCCeEEE
Q psy7057          90 -NGIIVTGCADKTIKL  104 (557)
Q Consensus        90 -~~~l~sgs~dg~I~v  104 (557)
                       ++.|..+...|.+.-
T Consensus       146 g~~sly~a~t~G~vla  161 (354)
T KOG4649|consen  146 GDGSLYAAITAGAVLA  161 (354)
T ss_pred             CCceEEEEeccceEEE
Confidence             445555555555433

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=97.61  E-value=0.035  Score=54.14  Aligned_cols=184  Identities=16%  Similarity=0.080  Sum_probs=111.2

Q ss_pred             EEEEcC-CC-EEEEEECCCeEEEEeCCCcEEEEEeCCCCCEEEEEEe-CCCeEEEEECCCeEEEEECCCCeEEEEEeC--
Q psy7057          84 GVIQLA-NG-IIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVL-NDTDFVSCSNDASIRVWDSTTGKCVHTMYG--  158 (557)
Q Consensus        84 ~l~~~~-~~-~l~sgs~dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~-~~~~lvs~s~Dg~I~vwd~~~~~~~~~~~~--  158 (557)
                      +++|.+ ++ ++++-...+.|..|+..+.....+....  ...+++. +++.++.+...+. .++|+.+++.......  
T Consensus         4 gp~~d~~~g~l~~~D~~~~~i~~~~~~~~~~~~~~~~~--~~G~~~~~~~g~l~v~~~~~~-~~~d~~~g~~~~~~~~~~   80 (246)
T PF08450_consen    4 GPVWDPRDGRLYWVDIPGGRIYRVDPDTGEVEVIDLPG--PNGMAFDRPDGRLYVADSGGI-AVVDPDTGKVTVLADLPD   80 (246)
T ss_dssp             EEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEESSS--EEEEEEECTTSEEEEEETTCE-EEEETTTTEEEEEEEEET
T ss_pred             ceEEECCCCEEEEEEcCCCEEEEEECCCCeEEEEecCC--CceEEEEccCCEEEEEEcCce-EEEecCCCcEEEEeeccC
Confidence            567777 56 6666667889999997777666555333  6777777 7788888877554 5559888865433332  


Q ss_pred             ---CCCcEEEEEE--cCCEEEEEeCC--------CeEEEEECCCC-ceEeeCCccEEEEEEcCCCc-E-EEEEcCCcEEE
Q psy7057         159 ---HPNFIYSVAA--HGDLITSGGED--------QCVCVYQNKAQ-NSFMIPAMSVWAVAILPNSD-I-VTGSSDGIVRV  222 (557)
Q Consensus       159 ---h~~~V~~l~~--~~~~l~s~s~D--------g~I~iwd~~~~-~~~~~~~~~v~~v~~~p~g~-l-~sg~~Dg~I~i  222 (557)
                         .......+++  +|++.++....        +.|..++.... ..+...-...+.++|+|+++ | ++-+..+.|..
T Consensus        81 ~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~~~~~~~~~~~~~pNGi~~s~dg~~lyv~ds~~~~i~~  160 (246)
T PF08450_consen   81 GGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPDGKVTVVADGLGFPNGIAFSPDGKTLYVADSFNGRIWR  160 (246)
T ss_dssp             TCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETTSEEEEEEEEESSEEEEEEETTSSEEEEEETTTTEEEE
T ss_pred             CCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCCCeEEEEecCcccccceEECCcchheeecccccceeEE
Confidence               3456677888  66766665544        55777776622 33333344678999999998 4 46667888999


Q ss_pred             EecCCCCc-ch-hH---HHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecC
Q psy7057         223 FSANPDRQ-AE-DA---VQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSAN  271 (557)
Q Consensus       223 wd~~~~~~-~~-~~---~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~  271 (557)
                      ++++.... .. ..   ......+....+...... ...++.-..+.|.+++.+
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G-~l~va~~~~~~I~~~~p~  213 (246)
T PF08450_consen  161 FDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDG-NLWVADWGGGRIVVFDPD  213 (246)
T ss_dssp             EEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS--EEEEEETTTEEEEEETT
T ss_pred             EeccccccceeeeeeEEEcCCCCcCCCcceEcCCC-CEEEEEcCCCEEEEECCC
Confidence            98864332 10 00   011111123344443333 334455566777777644

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases

Probab=97.60  E-value=0.028  Score=60.83  Aligned_cols=249  Identities=12%  Similarity=0.101  Sum_probs=140.1

Q ss_pred             CCcEEEEECCCcEEEEcCCC------CCCC----------------CCC-CEEEEEECCCeEEEEECCCCeEEEEEcccC
Q psy7057          23 DGCILSASRDKSAKLWKPND------LSPG----------------AKV-NTLLSASWDMTAKLWCLESQQCKLTIRQHE   79 (557)
Q Consensus        23 dg~l~sgs~Dg~V~iWd~~~------~~~~----------------~~~-~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~   79 (557)
                      +++++.++.++.|.-.|..+      ....                -.+ ..++.++.++.|.-+|.++|+.+..+....
T Consensus        61 ~g~vy~~~~~g~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~~~~~V~v~~~~g~v~AlD~~TG~~~W~~~~~~  140 (488)
T cd00216          61 DGDMYFTTSHSALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVAYWDPRKVFFGTFDGRLVALDAETGKQVWKFGNND  140 (488)
T ss_pred             CCEEEEeCCCCcEEEEECCCChhhceeCCCCCccccccccccCCcEEccCCeEEEecCCCeEEEEECCCCCEeeeecCCC
Confidence            55677788888888888765      0000                013 788888999999999999999888776433


Q ss_pred             Cc-----EEE-EEEcCCCEEEEEE---------CCCeEEEEe-CCCcEEEEEeCCCC--------------------CEE
Q psy7057          80 MA-----VWG-VIQLANGIIVTGC---------ADKTIKLHS-EEGEFLKTLTGHTD--------------------CVR  123 (557)
Q Consensus        80 ~~-----V~~-l~~~~~~~l~sgs---------~dg~I~vwd-~~~~~~~~l~~h~~--------------------~V~  123 (557)
                      ..     +.+ ..+. ++.++.++         .++.+..+| .+|+.+..+.....                    .|+
T Consensus       141 ~~~~~~~i~ssP~v~-~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~~vw  219 (488)
T cd00216         141 QVPPGYTMTGAPTIV-KKLVIIGSSGAEFFACGVRGALRAYDVETGKLLWRFYTTEPDPNAFPTWGPDRQMWGPGGGTSW  219 (488)
T ss_pred             CcCcceEecCCCEEE-CCEEEEeccccccccCCCCcEEEEEECCCCceeeEeeccCCCcCCCCCCCCCcceecCCCCCcc
Confidence            21     111 1111 35555554         357788888 57777766543211                    111


Q ss_pred             -EEEEeC-CCeEEEEECCC------------------eEEEEECCCCeEEEEEeC--CCC---------cEEEEE-EcCC
Q psy7057         124 -GLAVLN-DTDFVSCSNDA------------------SIRVWDSTTGKCVHTMYG--HPN---------FIYSVA-AHGD  171 (557)
Q Consensus       124 -~l~~~~-~~~lvs~s~Dg------------------~I~vwd~~~~~~~~~~~~--h~~---------~V~~l~-~~~~  171 (557)
                       +.++.+ .+.++.++.++                  .|.-+|..+|+.+-.++.  |..         .+..+. .++.
T Consensus       220 ~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~~W~~~~~~~~~~~~~~~s~p~~~~~~~~~g~  299 (488)
T cd00216         220 ASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKVKWFYQTTPHDLWDYDGPNQPSLADIKPKDGK  299 (488)
T ss_pred             CCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCEEEEeeCCCCCCcccccCCCCeEEeccccCCC
Confidence             233333 35566666554                  799999999998877652  211         111111 2343


Q ss_pred             ---EEEEEeCCCeEEEEECCCCceEeeCCccEEEEEEcCCCcEEEE------------------EcCCcEEEEecCCCCc
Q psy7057         172 ---LITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILPNSDIVTG------------------SSDGIVRVFSANPDRQ  230 (557)
Q Consensus       172 ---~l~s~s~Dg~I~iwd~~~~~~~~~~~~~v~~v~~~p~g~l~sg------------------~~Dg~I~iwd~~~~~~  230 (557)
                         .++.++.+|.+...|..+.+.+-........++..| +.++.+                  ..+|.|.-.|..+++.
T Consensus       300 ~~~~V~~g~~~G~l~ald~~tG~~~W~~~~~~~~~~~~~-~~vyv~~~~~~~~~~~~~~~~~~~~~~G~l~AlD~~tG~~  378 (488)
T cd00216         300 PVPAIVHAPKNGFFYVLDRTTGKLISARPEVEQPMAYDP-GLVYLGAFHIPLGLPPQKKKRCKKPGKGGLAALDPKTGKV  378 (488)
T ss_pred             eeEEEEEECCCceEEEEECCCCcEeeEeEeeccccccCC-ceEEEccccccccCcccccCCCCCCCceEEEEEeCCCCcE
Confidence               577888999999999877744332211112233333 222221                  1345666666666554


Q ss_pred             chhHHHhccc------cee--EEEeccCCCceeEEEEeCCCcEEEEecCCChhh
Q psy7057         231 AEDAVQAQYA------EEV--KKLKSANEQEIGGVKVSDDGIVRVFSANPDRQA  276 (557)
Q Consensus       231 ~~~~~~~~~~------~~v--~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~~~~  276 (557)
                      .=........      ...  ..+.   .....++.++.||.|+.++..+++.+
T Consensus       379 ~W~~~~~~~~~~~~~g~~~~~~~~~---~~g~~v~~g~~dG~l~ald~~tG~~l  429 (488)
T cd00216         379 VWEKREGTIRDSWNIGFPHWGGSLA---TAGNLVFAGAADGYFRAFDATTGKEL  429 (488)
T ss_pred             eeEeeCCccccccccCCcccCcceE---ecCCeEEEECCCCeEEEEECCCCcee
Confidence            3111111000      000  0000   11234677889999999998887544

The alignment model contains an 8-bladed beta-propeller.

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=97.57  E-value=0.006  Score=50.90  Aligned_cols=97  Identities=23%  Similarity=0.320  Sum_probs=68.1

Q ss_pred             EEEEEEeC---C--CeEEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE-cCCEEEEEeCCCeEEEEECCCC-ceEe
Q psy7057         122 VRGLAVLN---D--TDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA-HGDLITSGGEDQCVCVYQNKAQ-NSFM  194 (557)
Q Consensus       122 V~~l~~~~---~--~~lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~-~~~~l~s~s~Dg~I~iwd~~~~-~~~~  194 (557)
                      |++|++.+   +  ..|+.||.|..||+|+  ..+.+.++. -.+.|.+++. .+..++.+..+|+|-+|+.... -.++
T Consensus         2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~--~~e~~~Ei~-e~~~v~~L~~~~~~~F~Y~l~NGTVGvY~~~~RlWRiK   78 (111)
T PF14783_consen    2 VTALCLFDFDGDGENELLVGSDDFEIRVFK--GDEIVAEIT-ETDKVTSLCSLGGGRFAYALANGTVGVYDRSQRLWRIK   78 (111)
T ss_pred             eeEEEEEecCCCCcceEEEecCCcEEEEEe--CCcEEEEEe-cccceEEEEEcCCCEEEEEecCCEEEEEeCcceeeeec
Confidence            66777653   3  4499999999999998  567777776 4566777776 6678999999999999985433 2333


Q ss_pred             eCCccEEEEEEc-CCC--c--EEEEEcCCcEEE
Q psy7057         195 IPAMSVWAVAIL-PNS--D--IVTGSSDGIVRV  222 (557)
Q Consensus       195 ~~~~~v~~v~~~-p~g--~--l~sg~~Dg~I~i  222 (557)
                      ... .+.++++. .++  .  |++|-++|.|-+
T Consensus        79 SK~-~~~~~~~~D~~gdG~~eLI~GwsnGkve~  110 (111)
T PF14783_consen   79 SKN-QVTSMAFYDINGDGVPELIVGWSNGKVEV  110 (111)
T ss_pred             cCC-CeEEEEEEcCCCCCceEEEEEecCCeEEe
Confidence            222 35555543 333  2  999999998753

>PRK04043 tolB translocation protein TolB; Provisional

Probab=97.56  E-value=0.031  Score=59.15  Aligned_cols=165  Identities=10%  Similarity=-0.038  Sum_probs=95.2

Q ss_pred             eEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-E-EEEEECC---CeEEEEeCCCcEEEEEeCCCCCEEEEEEeCCCe-E
Q psy7057          60 TAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-I-IVTGCAD---KTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTD-F  133 (557)
Q Consensus        60 ~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~-l~sgs~d---g~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~~~-l  133 (557)
                      .|.+-|...... ..+.... ......|+|++ . ++..+.+   ..|.++|..+.....+....+......|+|++. +
T Consensus       170 ~l~~~d~dg~~~-~~~~~~~-~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~~~g~~~~~~~SPDG~~l  247 (419)
T PRK04043        170 NIVLADYTLTYQ-KVIVKGG-LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIASSQGMLVVSDVSKDGSKL  247 (419)
T ss_pred             eEEEECCCCCce-eEEccCC-CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEecCCCcEEeeEECCCCCEE
Confidence            455555544333 3333233 77789999998 3 5544443   458888865555555554556677788999986 4


Q ss_pred             E-EEECC--CeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEe-CCC--eEEEEECCCC--ceEeeCCccEEEE
Q psy7057         134 V-SCSND--ASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGG-EDQ--CVCVYQNKAQ--NSFMIPAMSVWAV  203 (557)
Q Consensus       134 v-s~s~D--g~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s-~Dg--~I~iwd~~~~--~~~~~~~~~v~~v  203 (557)
                      + +.+.+  ..|.++|+.+++. ..+..+........|  +|+.|+-.+ ..+  .|.+.++...  +.+....  ....
T Consensus       248 a~~~~~~g~~~Iy~~dl~~g~~-~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt~~g--~~~~  324 (419)
T PRK04043        248 LLTMAPKGQPDIYLYDTNTKTL-TQITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQVVFHG--KNNS  324 (419)
T ss_pred             EEEEccCCCcEEEEEECCCCcE-EEcccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEeCccCC--CcCc
Confidence            4 44434  4688888877764 334434432233345  777655444 334  5667776554  2332221  1235


Q ss_pred             EEcCCCc-EEEEEcC---------CcEEEEecCCCC
Q psy7057         204 AILPNSD-IVTGSSD---------GIVRVFSANPDR  229 (557)
Q Consensus       204 ~~~p~g~-l~sg~~D---------g~I~iwd~~~~~  229 (557)
                      .|+|+|+ ++..+..         ..|.+.++.++.
T Consensus       325 ~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~  360 (419)
T PRK04043        325 SVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDY  360 (419)
T ss_pred             eECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCC
Confidence            8999999 5444332         257777776654

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=97.50  E-value=0.0097  Score=49.66  Aligned_cols=97  Identities=22%  Similarity=0.301  Sum_probs=69.8

Q ss_pred             EEEEEEcC---CC--EEEEEECCCeEEEEeCCCcEEEEEeCCCCCEEEEEEeCCCeEEEEECCCeEEEEECCCCeEEEEE
Q psy7057          82 VWGVIQLA---NG--IIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTM  156 (557)
Q Consensus        82 V~~l~~~~---~~--~l~sgs~dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~~~~~~  156 (557)
                      |+++++.+   +|  .|+.||.|..||+|+ ....+..+. ..+.|.+++-...++|+.+..+|+|-+|+-  ...+...
T Consensus         2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~-~~e~~~Ei~-e~~~v~~L~~~~~~~F~Y~l~NGTVGvY~~--~~RlWRi   77 (111)
T PF14783_consen    2 VTALCLFDFDGDGENELLVGSDDFEIRVFK-GDEIVAEIT-ETDKVTSLCSLGGGRFAYALANGTVGVYDR--SQRLWRI   77 (111)
T ss_pred             eeEEEEEecCCCCcceEEEecCCcEEEEEe-CCcEEEEEe-cccceEEEEEcCCCEEEEEecCCEEEEEeC--cceeeee
Confidence            55666554   44  899999999999995 346666665 456788898888899999999999999983  3444444


Q ss_pred             eCCCCcEEEEEE---c--CC-EEEEEeCCCeEE
Q psy7057         157 YGHPNFIYSVAA---H--GD-LITSGGEDQCVC  183 (557)
Q Consensus       157 ~~h~~~V~~l~~---~--~~-~l~s~s~Dg~I~  183 (557)
                      +. ...+.++.+   +  |. -|++|-.+|.|-
T Consensus        78 KS-K~~~~~~~~~D~~gdG~~eLI~GwsnGkve  109 (111)
T PF14783_consen   78 KS-KNQVTSMAFYDINGDGVPELIVGWSNGKVE  109 (111)
T ss_pred             cc-CCCeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence            43 333666665   2  22 588888888774

>KOG2114|consensus

Probab=97.47  E-value=0.049  Score=59.88  Aligned_cols=173  Identities=14%  Similarity=0.165  Sum_probs=112.6

Q ss_pred             cEEEEEEcCCC-cEEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCC-----eEEEEECCCC--
Q psy7057          14 DVRSLSVTPDG-CILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDM-----TAKLWCLESQ--   69 (557)
Q Consensus        14 ~V~~l~~spdg-~l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg-----~i~iwd~~~~--   69 (557)
                      .|+|  |++.+ .++.|+.+|.|.+.+-.-                +......++|++-+.|+     .+++|+++.-  
T Consensus        27 ~isc--~~s~~~~vvigt~~G~V~~Ln~s~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~  104 (933)
T KOG2114|consen   27 AISC--CSSSTGSVVIGTADGRVVILNSSFQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDK  104 (933)
T ss_pred             ceeE--EcCCCceEEEeeccccEEEecccceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCC
Confidence            4554  34554 499999999999887543                11222336788877765     4899998642  


Q ss_pred             ----eEE--EEEcc-----cCCcEEEEEEcCCC-EEEEEECCCeEEEEe-----CCCcEEEEEeCCCCCEEEEEEeCCCe
Q psy7057          70 ----QCK--LTIRQ-----HEMAVWGVIQLANG-IIVTGCADKTIKLHS-----EEGEFLKTLTGHTDCVRGLAVLNDTD  132 (557)
Q Consensus        70 ----~~~--~~l~~-----h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-----~~~~~~~~l~~h~~~V~~l~~~~~~~  132 (557)
                          .++  +.+.+     ...++++++.+.+- .+++|-.+|.|..+.     ..+....-...-..+|+.+.+..++.
T Consensus       105 n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d~~  184 (933)
T KOG2114|consen  105 NNSPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSDGK  184 (933)
T ss_pred             CCCcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEecCCc
Confidence                233  12222     24567888888765 899999999999885     12222222233467899999987765


Q ss_pred             E-EEEECCCeEEEEECCCCeE-EEEEeCCCCcEEEEEE-cCCE-EEEEeCCCeEEEEECCC
Q psy7057         133 F-VSCSNDASIRVWDSTTGKC-VHTMYGHPNFIYSVAA-HGDL-ITSGGEDQCVCVYQNKA  189 (557)
Q Consensus       133 l-vs~s~Dg~I~vwd~~~~~~-~~~~~~h~~~V~~l~~-~~~~-l~s~s~Dg~I~iwd~~~  189 (557)
                      . +-+..-..|.+|.+....+ ...+..|...+.|.++ ++.. ++++ .+..+.+|+...
T Consensus       185 s~lFv~Tt~~V~~y~l~gr~p~~~~ld~~G~~lnCss~~~~t~qfIca-~~e~l~fY~sd~  244 (933)
T KOG2114|consen  185 SVLFVATTEQVMLYSLSGRTPSLKVLDNNGISLNCSSFSDGTYQFICA-GSEFLYFYDSDG  244 (933)
T ss_pred             eeEEEEecceeEEEEecCCCcceeeeccCCccceeeecCCCCccEEEe-cCceEEEEcCCC
Confidence            2 3333446799999874332 4457778888999988 4444 4444 455789998543

>KOG1275|consensus

Probab=97.44  E-value=0.0022  Score=70.33  Aligned_cols=177  Identities=12%  Similarity=0.164  Sum_probs=116.9

Q ss_pred             EEEEEECCCeEEEEeCCCcEEEEEeC-CCCCEEEEEEeCCCe-EEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEEc
Q psy7057          92 IIVTGCADKTIKLHSEEGEFLKTLTG-HTDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAH  169 (557)
Q Consensus        92 ~l~sgs~dg~I~vwd~~~~~~~~l~~-h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~~  169 (557)
                      .++-|+....+..+|..+.+...... ....|.-|+.  +++ +.+|...|+|.+-|.++.+.++++..|++.|.++...
T Consensus       149 ~~i~Gg~Q~~li~~Dl~~~~e~r~~~v~a~~v~imR~--Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~siSDfDv~  226 (1118)
T KOG1275|consen  149 TLIMGGLQEKLIHIDLNTEKETRTTNVSASGVTIMRY--NNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSISDFDVQ  226 (1118)
T ss_pred             ceeecchhhheeeeecccceeeeeeeccCCceEEEEe--cCcEEEeecccceEEeecCCcCceeeeeeccccceeeeecc
Confidence            56667766777777865555444332 2334555543  445 6688899999999999999999999999999999999


Q ss_pred             CCEEEEEeCC---------CeEEEEECCCCceEe---eCCccEEEEEEcCCCc--EEEEEcCCcEEEEe---cCCCCcch
Q psy7057         170 GDLITSGGED---------QCVCVYQNKAQNSFM---IPAMSVWAVAILPNSD--IVTGSSDGIVRVFS---ANPDRQAE  232 (557)
Q Consensus       170 ~~~l~s~s~D---------g~I~iwd~~~~~~~~---~~~~~v~~v~~~p~g~--l~sg~~Dg~I~iwd---~~~~~~~~  232 (557)
                      |+.|++||..         .-|+|||++..+.+.   .+..+ .-+.|+|.-.  +++++..|...+-|   +.......
T Consensus       227 GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~~P-~flrf~Psl~t~~~V~S~sGq~q~vd~~~lsNP~~~~  305 (1118)
T KOG1275|consen  227 GNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPYGP-QFLRFHPSLTTRLAVTSQSGQFQFVDTATLSNPPAGV  305 (1118)
T ss_pred             CCeEEEeecccccccccccchhhhhhhhhhhccCCcccccCc-hhhhhcccccceEEEEecccceeeccccccCCCccce
Confidence            9999999854         457999988774443   22222 4466777643  88888889888887   33221110


Q ss_pred             hHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCC
Q psy7057         233 DAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPD  273 (557)
Q Consensus       233 ~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~  273 (557)
                      .. ......-+..+...+. ...++.|..+|.|.+|.-.+.
T Consensus       306 ~~-v~p~~s~i~~fDiSsn-~~alafgd~~g~v~~wa~~~~  344 (1118)
T KOG1275|consen  306 KM-VNPNGSGISAFDISSN-GDALAFGDHEGHVNLWADRPQ  344 (1118)
T ss_pred             eE-EccCCCcceeEEecCC-CceEEEecccCcEeeecCCCC
Confidence            00 0001111333433333 335677889999999985444

>KOG1920|consensus

Probab=97.44  E-value=0.0098  Score=67.44  Aligned_cols=184  Identities=14%  Similarity=0.142  Sum_probs=108.6

Q ss_pred             CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCC-----cEE----
Q psy7057          43 LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEG-----EFL----  112 (557)
Q Consensus        43 ~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~-----~~~----  112 (557)
                      +.+..+.+.++.+...|.|.+-|.++.... ....-...|.+++|+|++ .++..+.+.++.+-+.+-     +++    
T Consensus        74 ~~fl~d~~~i~v~~~~G~iilvd~et~~~e-ivg~vd~GI~aaswS~Dee~l~liT~~~tll~mT~~f~~i~E~~L~~d~  152 (1265)
T KOG1920|consen   74 VQFLADTNSICVITALGDIILVDPETLELE-IVGNVDNGISAASWSPDEELLALITGRQTLLFMTKDFEPIAEKPLDADD  152 (1265)
T ss_pred             EEEecccceEEEEecCCcEEEEccccccee-eeeeccCceEEEeecCCCcEEEEEeCCcEEEEEeccccchhcccccccc
Confidence            445556777888888888888877664322 222246678888888888 666666666766643110     000    


Q ss_pred             ---------------EEEeCC---------------------CCCEEEEEEeCCCeEEEE-----ECC-CeEEEEECCCC
Q psy7057         113 ---------------KTLTGH---------------------TDCVRGLAVLNDTDFVSC-----SND-ASIRVWDSTTG  150 (557)
Q Consensus       113 ---------------~~l~~h---------------------~~~V~~l~~~~~~~lvs~-----s~D-g~I~vwd~~~~  150 (557)
                                     ..+.|.                     .+.=++|+|-.+|.+++.     -.+ +.|++||-. |
T Consensus       153 ~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~~RkirV~drE-g  231 (1265)
T KOG1920|consen  153 ERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVSFVESETGTRKIRVYDRE-G  231 (1265)
T ss_pred             ccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEEEEEEEeccCCceeEEEeccc-c
Confidence                           011110                     112235889889875533     234 789999954 4


Q ss_pred             eEEEEEeCCCCcEEEEEE--cCCEEEEE---eCCCeEEEEECCCC----ceE--eeCCccEEEEEEcCCCc-EEE---EE
Q psy7057         151 KCVHTMYGHPNFIYSVAA--HGDLITSG---GEDQCVCVYQNKAQ----NSF--MIPAMSVWAVAILPNSD-IVT---GS  215 (557)
Q Consensus       151 ~~~~~~~~h~~~V~~l~~--~~~~l~s~---s~Dg~I~iwd~~~~----~~~--~~~~~~v~~v~~~p~g~-l~s---g~  215 (557)
                      ..-.+-......-.+++|  .|..+++-   ++|..|.+|.-...    ..+  ......+..++|+.++. +++   ..
T Consensus       232 ~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErNGL~hg~f~l~~p~de~~ve~L~Wns~sdiLAv~~~~~  311 (1265)
T KOG1920|consen  232 ALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERNGLRHGEFVLPFPLDEKEVEELAWNSNSDILAVVTSNL  311 (1265)
T ss_pred             hhhcccCcccccccceeecCCCCeEeeeeecCCCCcEEEEecCCccccccccCCcccccchheeeecCCCCceeeeeccc
Confidence            332222223334456777  56666654   35667999984332    122  22233489999999998 333   33


Q ss_pred             cCCcEEEEecCCC
Q psy7057         216 SDGIVRVFSANPD  228 (557)
Q Consensus       216 ~Dg~I~iwd~~~~  228 (557)
                      ....|++|.+.+-
T Consensus       312 e~~~v~lwt~~Ny  324 (1265)
T KOG1920|consen  312 ENSLVQLWTTGNY  324 (1265)
T ss_pred             ccceEEEEEecCe
Confidence            4444999998764

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=97.41  E-value=0.16  Score=50.43  Aligned_cols=203  Identities=15%  Similarity=0.157  Sum_probs=126.0

Q ss_pred             EEEEcCCC-c-EEEEECCCc-EEEEcCCC------------------CCCCCCCCEEEEEEC-----CCeEEEEECC-CC
Q psy7057          17 SLSVTPDG-C-ILSASRDKS-AKLWKPND------------------LSPGAKVNTLLSASW-----DMTAKLWCLE-SQ   69 (557)
Q Consensus        17 ~l~~spdg-~-l~sgs~Dg~-V~iWd~~~------------------~~~~~~~~~l~sgs~-----Dg~i~iwd~~-~~   69 (557)
                      .++.+|.. . ++.+-+-|+ ..+||..+                  -.+++++.+|++.-.     .|.|-|||.. +.
T Consensus         9 ~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~~~   88 (305)
T PF07433_consen    9 GVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAARGY   88 (305)
T ss_pred             ceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECcCCc
Confidence            45666633 3 445555444 44555554                  456778999988655     4789999998 66


Q ss_pred             eEEEEEcccCCcEEEEEEcCCC-EEEEEEC------------------CCeEEEEe-CCCcEEEE--E--eCCCCCEEEE
Q psy7057          70 QCKLTIRQHEMAVWGVIQLANG-IIVTGCA------------------DKTIKLHS-EEGEFLKT--L--TGHTDCVRGL  125 (557)
Q Consensus        70 ~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~------------------dg~I~vwd-~~~~~~~~--l--~~h~~~V~~l  125 (557)
                      +.+..+..|.-....+.+.|++ .|+.+-.                  +-.+...| .+|+.+..  +  .-|.-+|+.|
T Consensus        89 ~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~~lSiRHL  168 (305)
T PF07433_consen   89 RRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPDLHQLSIRHL  168 (305)
T ss_pred             EEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeeecCccccccceeeE
Confidence            7788888877666778889998 5555421                  12233343 55666555  4  3377889999


Q ss_pred             EEeCCCeEEEEECC-C-------eEEEEECCCCeEEEEEe-------CCCCcEEEEEE--cCCEEE-EEeCCCeEEEEEC
Q psy7057         126 AVLNDTDFVSCSND-A-------SIRVWDSTTGKCVHTMY-------GHPNFIYSVAA--HGDLIT-SGGEDQCVCVYQN  187 (557)
Q Consensus       126 ~~~~~~~lvs~s~D-g-------~I~vwd~~~~~~~~~~~-------~h~~~V~~l~~--~~~~l~-s~s~Dg~I~iwd~  187 (557)
                      ++.++|.++.+... +       .|-+++  .++.+..+.       .-...+-+|++  ++..++ |+=..+++.+||.
T Consensus       169 a~~~~G~V~~a~Q~qg~~~~~~PLva~~~--~g~~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~tsPrGg~~~~~d~  246 (305)
T PF07433_consen  169 AVDGDGTVAFAMQYQGDPGDAPPLVALHR--RGGALRLLPAPEEQWRRLNGYIGSIAADRDGRLIAVTSPRGGRVAVWDA  246 (305)
T ss_pred             EecCCCcEEEEEecCCCCCccCCeEEEEc--CCCcceeccCChHHHHhhCCceEEEEEeCCCCEEEEECCCCCEEEEEEC
Confidence            99999887655432 1       234444  333333332       22467889999  455554 5556789999998


Q ss_pred             CCCceEeeCC-ccEEEEEEcCCCcEEEEEcCCcEEE
Q psy7057         188 KAQNSFMIPA-MSVWAVAILPNSDIVTGSSDGIVRV  222 (557)
Q Consensus       188 ~~~~~~~~~~-~~v~~v~~~p~g~l~sg~~Dg~I~i  222 (557)
                      .+...+.... ..+..++..+++ |+.++..|.+..
T Consensus       247 ~tg~~~~~~~l~D~cGva~~~~~-f~~ssG~G~~~~  281 (305)
T PF07433_consen  247 ATGRLLGSVPLPDACGVAPTDDG-FLVSSGQGQLIR  281 (305)
T ss_pred             CCCCEeeccccCceeeeeecCCc-eEEeCCCccEEE
Confidence            8775544332 245566666666 555555565433

>KOG1832|consensus

Probab=97.39  E-value=7.3e-05  Score=80.96  Aligned_cols=190  Identities=12%  Similarity=0.124  Sum_probs=120.3

Q ss_pred             cEEEEEeccCcccEEEEEEcCCCcEEEEECCCcEEEEcCCCCCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCc
Q psy7057           2 YKLSTALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMA   81 (557)
Q Consensus         2 ~kl~~~l~gH~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~   81 (557)
                      |+-.++++.|+..-+|++|+-+                         .+.|+.|+..|.|+++++.+|.......+|..+
T Consensus      1091 Fr~w~~frd~~~~fTc~afs~~-------------------------~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~Sa 1145 (1516)
T KOG1832|consen 1091 FRSWRSFRDETALFTCIAFSGG-------------------------TNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSA 1145 (1516)
T ss_pred             cccchhhhccccceeeEEeecC-------------------------CceEEeeeccceEEEEEccCccccccccccccc
Confidence            4555667777778888888765                         567777888888888888888888888999999


Q ss_pred             EEEEEEcCCC--EEEEEECCC-eEEEEeC--CCcEEEEEeCCCCCEEEEEEeCCCeE-EEEECCCeEEEEECCCCeEEEE
Q psy7057          82 VWGVIQLANG--IIVTGCADK-TIKLHSE--EGEFLKTLTGHTDCVRGLAVLNDTDF-VSCSNDASIRVWDSTTGKCVHT  155 (557)
Q Consensus        82 V~~l~~~~~~--~l~sgs~dg-~I~vwd~--~~~~~~~l~~h~~~V~~l~~~~~~~l-vs~s~Dg~I~vwd~~~~~~~~~  155 (557)
                      |+.+.-+.+|  .|.++++.. ...+|+.  .+.+.+++.+    -.++.|+...++ +.|.......+||++++.++.+
T Consensus      1146 vT~vePs~dgs~~Ltsss~S~PlsaLW~~~s~~~~~Hsf~e----d~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~t 1221 (1516)
T KOG1832|consen 1146 VTLVEPSVDGSTQLTSSSSSSPLSALWDASSTGGPRHSFDE----DKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQT 1221 (1516)
T ss_pred             cccccccCCcceeeeeccccCchHHHhccccccCccccccc----cceeehhhhHHHHHhcccccceEEEecccCcHHHH
Confidence            9999888888  444455444 4678983  4455555543    356778766442 2444446789999999987777


Q ss_pred             EeCC----CCcEEEEEEc--CCEEEEEeCCCeEEEEECCCCceEeeCCc--cEEEEEEcCCCc-EEEEEcCCcEEEEecC
Q psy7057         156 MYGH----PNFIYSVAAH--GDLITSGGEDQCVCVYQNKAQNSFMIPAM--SVWAVAILPNSD-IVTGSSDGIVRVFSAN  226 (557)
Q Consensus       156 ~~~h----~~~V~~l~~~--~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~--~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~  226 (557)
                      +...    ...-.+..|+  ..+++   +||  .+||.+..+.+.....  ---.-.|+|+|. ++.-++     |||++
T Consensus      1222 ylt~~~~~~y~~n~a~FsP~D~LIl---ndG--vLWDvR~~~aIh~FD~ft~~~~G~FHP~g~eVIINSE-----IwD~R 1291 (1516)
T KOG1832|consen 1222 YLTDTVTSSYSNNLAHFSPCDTLIL---NDG--VLWDVRIPEAIHRFDQFTDYGGGGFHPSGNEVIINSE-----IWDMR 1291 (1516)
T ss_pred             hcCcchhhhhhccccccCCCcceEe---eCc--eeeeeccHHHHhhhhhheecccccccCCCceEEeech-----hhhhH
Confidence            4311    1111233332  22222   233  3688766533322221  112345899987 666554     88887


Q ss_pred             CCCc
Q psy7057         227 PDRQ  230 (557)
Q Consensus       227 ~~~~  230 (557)
                      +.+.
T Consensus      1292 TF~l 1295 (1516)
T KOG1832|consen 1292 TFKL 1295 (1516)
T ss_pred             HHHH
Confidence            7554

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=97.37  E-value=0.17  Score=50.25  Aligned_cols=189  Identities=15%  Similarity=0.081  Sum_probs=122.1

Q ss_pred             CCC-CCCEEEEEECCCe-EEEEECCCCeEEEEEcccCCcE--EEEEEcCCC-EEEEEE-----CCCeEEEEeCC--CcEE
Q psy7057          45 PGA-KVNTLLSASWDMT-AKLWCLESQQCKLTIRQHEMAV--WGVIQLANG-IIVTGC-----ADKTIKLHSEE--GEFL  112 (557)
Q Consensus        45 ~~~-~~~~l~sgs~Dg~-i~iwd~~~~~~~~~l~~h~~~V--~~l~~~~~~-~l~sgs-----~dg~I~vwd~~--~~~~  112 (557)
                      .+| ....++.+-.-|+ ..+||..+++....+....+.-  =.-+|+++| +|++.-     ..|.|-|||..  ...+
T Consensus        12 ~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~~~~ri   91 (305)
T PF07433_consen   12 AHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAARGYRRI   91 (305)
T ss_pred             eCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECcCCcEEE
Confidence            444 4556667777765 6789999998887765433322  135789999 555432     35789999954  4567


Q ss_pred             EEEeCCCCCEEEEEEeCCCe-EEEEE------------------CCCeEEEEECCCCeEEEEEe----CCCCcEEEEEEc
Q psy7057         113 KTLTGHTDCVRGLAVLNDTD-FVSCS------------------NDASIRVWDSTTGKCVHTMY----GHPNFIYSVAAH  169 (557)
Q Consensus       113 ~~l~~h~~~V~~l~~~~~~~-lvs~s------------------~Dg~I~vwd~~~~~~~~~~~----~h~~~V~~l~~~  169 (557)
                      ..+..|.-....+.+.|++. |+.+-                  .+-++...|..+|+.+....    .|.-.|+.++++
T Consensus        92 ~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~~lSiRHLa~~  171 (305)
T PF07433_consen   92 GEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPDLHQLSIRHLAVD  171 (305)
T ss_pred             eEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeeecCccccccceeeEEec
Confidence            77777777777788888884 54431                  23445567778888777633    377789999984


Q ss_pred             C--CEEEEEeCCC-------eEEEEECCCC-ceE-------eeCCccEEEEEEcCCCc-E-EEEEcCCcEEEEecCCCCc
Q psy7057         170 G--DLITSGGEDQ-------CVCVYQNKAQ-NSF-------MIPAMSVWAVAILPNSD-I-VTGSSDGIVRVFSANPDRQ  230 (557)
Q Consensus       170 ~--~~l~s~s~Dg-------~I~iwd~~~~-~~~-------~~~~~~v~~v~~~p~g~-l-~sg~~Dg~I~iwd~~~~~~  230 (557)
                      +  ..++.+-..+       .|-+++.... ..+       ......+-+|++++++. + +|+-.-+.+.+||..+++.
T Consensus       172 ~~G~V~~a~Q~qg~~~~~~PLva~~~~g~~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~tsPrGg~~~~~d~~tg~~  251 (305)
T PF07433_consen  172 GDGTVAFAMQYQGDPGDAPPLVALHRRGGALRLLPAPEEQWRRLNGYIGSIAADRDGRLIAVTSPRGGRVAVWDAATGRL  251 (305)
T ss_pred             CCCcEEEEEecCCCCCccCCeEEEEcCCCcceeccCChHHHHhhCCceEEEEEeCCCCEEEEECCCCCEEEEEECCCCCE
Confidence            3  3333332222       2445554332 222       22345789999999998 4 3444688999999998876


Q ss_pred             chh
Q psy7057         231 AED  233 (557)
Q Consensus       231 ~~~  233 (557)
                      ...
T Consensus       252 ~~~  254 (305)
T PF07433_consen  252 LGS  254 (305)
T ss_pred             eec
Confidence            543

>KOG1920|consensus

Probab=97.31  E-value=0.012  Score=66.84  Aligned_cols=209  Identities=11%  Similarity=0.129  Sum_probs=114.9

Q ss_pred             cccEEEEEEcCCCc-EEEEECCCcEEEEcC--CCCCC------CCCCCEEEEEECCCeEEEEECCCCe-----EEEE---
Q psy7057          12 SMDVRSLSVTPDGC-ILSASRDKSAKLWKP--NDLSP------GAKVNTLLSASWDMTAKLWCLESQQ-----CKLT---   74 (557)
Q Consensus        12 ~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~--~~~~~------~~~~~~l~sgs~Dg~i~iwd~~~~~-----~~~~---   74 (557)
                      .+.|.+++||||+. ++-.+..+++.+-.-  .-++-      ....+..++.+|.+.-.-+.-..|+     .+..   
T Consensus       109 d~GI~aaswS~Dee~l~liT~~~tll~mT~~f~~i~E~~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~  188 (1265)
T KOG1920|consen  109 DNGISAASWSPDEELLALITGRQTLLFMTKDFEPIAEKPLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKA  188 (1265)
T ss_pred             cCceEEEeecCCCcEEEEEeCCcEEEEEeccccchhccccccccccccccceecccccceeeecchhhhccccccccccc
Confidence            46788999999988 666666666665432  11100      0112334666665432222222221     0000   


Q ss_pred             ---EcccCCcEEEEEEcCCC-EEEEE----ECC-CeEEEEeCCCcEEEEEeCCCCCEEEEEEeCCCeEEE----EECCCe
Q psy7057          75 ---IRQHEMAVWGVIQLANG-IIVTG----CAD-KTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTDFVS----CSNDAS  141 (557)
Q Consensus        75 ---l~~h~~~V~~l~~~~~~-~l~sg----s~d-g~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~~~lvs----~s~Dg~  141 (557)
                         ..-+.. =++|.|-.+| ++++.    -.+ ..|++||.+|..-.+-.....-=.+++|-|.|.+++    -+.|+.
T Consensus       189 ~~~~~~~~~-~~~IsWRgDg~~fAVs~~~~~~~~RkirV~drEg~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~  267 (1265)
T KOG1920|consen  189 LEQIEQDDH-KTSISWRGDGEYFAVSFVESETGTRKIRVYDREGALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSD  267 (1265)
T ss_pred             ccchhhccC-CceEEEccCCcEEEEEEEeccCCceeEEEecccchhhcccCcccccccceeecCCCCeEeeeeecCCCCc
Confidence               011222 2358898899 55552    234 789999977554333333344456789999887542    235667


Q ss_pred             EEEEECCCCeEEEEE----eCCCCcEEEEEE--cCCEEEE---EeCCCeEEEEECCCC-----ceEeeCCccEEEEEEcC
Q psy7057         142 IRVWDSTTGKCVHTM----YGHPNFIYSVAA--HGDLITS---GGEDQCVCVYQNKAQ-----NSFMIPAMSVWAVAILP  207 (557)
Q Consensus       142 I~vwd~~~~~~~~~~----~~h~~~V~~l~~--~~~~l~s---~s~Dg~I~iwd~~~~-----~~~~~~~~~v~~v~~~p  207 (557)
                      |.++. ++|-....|    ......|..++|  +++.|++   +.....|++|.++.-     +.+..+....  +.|+|
T Consensus       268 IvffE-rNGL~hg~f~l~~p~de~~ve~L~Wns~sdiLAv~~~~~e~~~v~lwt~~NyhWYLKq~l~~~~~~~--~~W~p  344 (1265)
T KOG1920|consen  268 IVFFE-RNGLRHGEFVLPFPLDEKEVEELAWNSNSDILAVVTSNLENSLVQLWTTGNYHWYLKQELQFSQKAL--LMWDP  344 (1265)
T ss_pred             EEEEe-cCCccccccccCCcccccchheeeecCCCCceeeeecccccceEEEEEecCeEEEEEEEEecccccc--ccccC
Confidence            99998 455433322    222334889999  5666665   445556999997765     3333333333  66777


Q ss_pred             CCc--EEEEEcCCcEEEEe
Q psy7057         208 NSD--IVTGSSDGIVRVFS  224 (557)
Q Consensus       208 ~g~--l~sg~~Dg~I~iwd  224 (557)
                      ...  +..-+.+|...+++
T Consensus       345 ~~~~~L~v~~~sG~~~v~~  363 (1265)
T KOG1920|consen  345 VTEKTLHVLRESGQRLVRD  363 (1265)
T ss_pred             CCceeEEEEecCCcEEEEE
Confidence            543  44444555544444

>smart00320 WD40 WD40 repeats

Probab=97.29  E-value=0.00077  Score=43.36  Aligned_cols=38  Identities=42%  Similarity=0.631  Sum_probs=33.6

Q ss_pred             cEEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEc
Q psy7057           2 YKLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWK   39 (557)
Q Consensus         2 ~kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd   39 (557)
                      .+....+.+|...|++++|.+++. +++++.|+.+++|+
T Consensus         2 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~   40 (40)
T smart00320        2 GELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD   40 (40)
T ss_pred             cEEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence            467788899999999999999877 78999999999996

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>KOG1645|consensus

Probab=97.27  E-value=0.0051  Score=61.74  Aligned_cols=78  Identities=23%  Similarity=0.257  Sum_probs=66.1

Q ss_pred             EEEEeCCCCCEEEEEEeCCCe--EEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE---cCCEEEEEeCCCeEEEEE
Q psy7057         112 LKTLTGHTDCVRGLAVLNDTD--FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA---HGDLITSGGEDQCVCVYQ  186 (557)
Q Consensus       112 ~~~l~~h~~~V~~l~~~~~~~--lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~---~~~~l~s~s~Dg~I~iwd  186 (557)
                      ...+.+|...|+.++++|...  +..++.+.+|+|.|+++..++..+..+ ..+++++|   +..++.+|-..|.|.+||
T Consensus       186 sq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wSC~wDlde~h~IYaGl~nG~VlvyD  264 (463)
T KOG1645|consen  186 SQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDERHVIYAGLQNGMVLVYD  264 (463)
T ss_pred             hhcccccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheecc-CCceeeeeccCCcceeEEeccCceEEEEE
Confidence            344556778899999999855  669999999999999999999888877 89999999   345788999999999999


Q ss_pred             CCCC
Q psy7057         187 NKAQ  190 (557)
Q Consensus       187 ~~~~  190 (557)
                      ++..
T Consensus       265 ~R~~  268 (463)
T KOG1645|consen  265 MRQP  268 (463)
T ss_pred             ccCC
Confidence            7755

>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit

Probab=97.22  E-value=0.12  Score=52.72  Aligned_cols=209  Identities=18%  Similarity=0.179  Sum_probs=121.3

Q ss_pred             CeEEEEECCCCeEEEEEccc-CCcEEEEE---EcC-----CCEEEEEEC----------CCeEEEEeCCC-----cEEEE
Q psy7057          59 MTAKLWCLESQQCKLTIRQH-EMAVWGVI---QLA-----NGIIVTGCA----------DKTIKLHSEEG-----EFLKT  114 (557)
Q Consensus        59 g~i~iwd~~~~~~~~~l~~h-~~~V~~l~---~~~-----~~~l~sgs~----------dg~I~vwd~~~-----~~~~~  114 (557)
                      ..|++.|..+.+.+.++.-. ...+.+++   +..     ..+|+.|+.          .|.|.+++...     ..+..
T Consensus         2 s~i~l~d~~~~~~~~~~~l~~~E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~   81 (321)
T PF03178_consen    2 SSIRLVDPTTFEVLDSFELEPNEHVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKL   81 (321)
T ss_dssp             -EEEEEETTTSSEEEEEEEETTEEEEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEE
T ss_pred             cEEEEEeCCCCeEEEEEECCCCceEEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEcccccceEEEE
Confidence            35788888887766655332 33444443   332     236776654          28899998433     12222


Q ss_pred             E--eCCCCCEEEEEEeCCCeEEEEECCCeEEEEECCCCe-EEEEE-eCCCCcEEEEEEcCCEEEEEeCCCeEEEEECCC-
Q psy7057         115 L--TGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGK-CVHTM-YGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKA-  189 (557)
Q Consensus       115 l--~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~-~~~~~-~~h~~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~-  189 (557)
                      +  ....++|++++.. ++.++.+. .+.|.+|++...+ ....- ......+.++...+++++.|..-..+.++.... 
T Consensus        82 i~~~~~~g~V~ai~~~-~~~lv~~~-g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~~~~~I~vgD~~~sv~~~~~~~~  159 (321)
T PF03178_consen   82 IHSTEVKGPVTAICSF-NGRLVVAV-GNKLYVYDLDNSKTLLKKAFYDSPFYITSLSVFKNYILVGDAMKSVSLLRYDEE  159 (321)
T ss_dssp             EEEEEESS-EEEEEEE-TTEEEEEE-TTEEEEEEEETTSSEEEEEEE-BSSSEEEEEEETTEEEEEESSSSEEEEEEETT
T ss_pred             EEEEeecCcceEhhhh-CCEEEEee-cCEEEEEEccCcccchhhheecceEEEEEEeccccEEEEEEcccCEEEEEEEcc
Confidence            2  2457889999887 45555444 4889999988777 44332 224458888888888999999888888774322 


Q ss_pred             -C--ceEee--CCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcc--------hhHHHhcccceeEEE---eccC--
Q psy7057         190 -Q--NSFMI--PAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQA--------EDAVQAQYAEEVKKL---KSAN--  250 (557)
Q Consensus       190 -~--~~~~~--~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~--------~~~~~~~~~~~v~~l---~~~~--  250 (557)
                       .  ..+..  ....+.++.+.++++ ++++..+|.+.++........        .....-.....+..+   ...+  
T Consensus       160 ~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~~~~~~~~~~~~~L~~~~~f~lg~~v~~~~~~~l~~~~  239 (321)
T PF03178_consen  160 NNKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYNPEIPNSRDGDPKLERISSFHLGDIVNSFRRGSLIPRS  239 (321)
T ss_dssp             TE-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-SS-SSTTTTTTBEEEEEEEE-SS-EEEEEE--SS--S
T ss_pred             CCEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEECCCCcccccccccceeEEEEECCCccceEEEEEeeecC
Confidence             1  22221  234588888886665 889999999999998742111        111111122334444   2222  


Q ss_pred             CCc-----eeEEEEeCCCcEEEEe
Q psy7057         251 EQE-----IGGVKVSDDGIVRVFS  269 (557)
Q Consensus       251 ~~~-----~~~vs~s~DG~IrvW~  269 (557)
                      ...     ..++.++.+|.|-+.-
T Consensus       240 ~~~~~~~~~~i~~~T~~G~Ig~l~  263 (321)
T PF03178_consen  240 GSSESPNRPQILYGTVDGSIGVLI  263 (321)
T ss_dssp             SSS-TTEEEEEEEEETTS-EEEEE
T ss_pred             CCCcccccceEEEEecCCEEEEEE
Confidence            111     2468888999998544

CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....

>KOG2114|consensus

Probab=97.19  E-value=0.025  Score=62.05  Aligned_cols=187  Identities=14%  Similarity=0.225  Sum_probs=114.8

Q ss_pred             cEEEEEEcCCCEEEEEECCCeEEEEeCCCcEEEEEeCCCCC-EEEEEEeCCC-eEEEEECCC-----eEEEEECCC----
Q psy7057          81 AVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKTLTGHTDC-VRGLAVLNDT-DFVSCSNDA-----SIRVWDSTT----  149 (557)
Q Consensus        81 ~V~~l~~~~~~~l~sgs~dg~I~vwd~~~~~~~~l~~h~~~-V~~l~~~~~~-~lvs~s~Dg-----~I~vwd~~~----  149 (557)
                      .|.|+. +..+.++.|+.+|.|.+.+.+-..++.++.+... |..+...... .+++.+.|+     .+++|++..    
T Consensus        27 ~isc~~-s~~~~vvigt~~G~V~~Ln~s~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n  105 (933)
T KOG2114|consen   27 AISCCS-SSTGSVVIGTADGRVVILNSSFQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKN  105 (933)
T ss_pred             ceeEEc-CCCceEEEeeccccEEEecccceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCC
Confidence            454432 3344999999999999998777777888888777 5555444442 355666554     599999853    


Q ss_pred             --CeEEE--EEeC-----CCCcEEEEEE--cCCEEEEEeCCCeEEEEEC---CCC---ceE-eeCCccEEEEEEcCCCc-
Q psy7057         150 --GKCVH--TMYG-----HPNFIYSVAA--HGDLITSGGEDQCVCVYQN---KAQ---NSF-MIPAMSVWAVAILPNSD-  210 (557)
Q Consensus       150 --~~~~~--~~~~-----h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~---~~~---~~~-~~~~~~v~~v~~~p~g~-  210 (557)
                        ..++.  .+..     .+.++.+++.  +-..+++|-.+|.|..+..   +..   ..+ .....+|+.+++..++. 
T Consensus       106 ~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d~~s  185 (933)
T KOG2114|consen  106 NSPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSDGKS  185 (933)
T ss_pred             CCcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEecCCce
Confidence              23441  2222     2456677777  4457999999999999972   222   222 22346899999999988 


Q ss_pred             EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecC
Q psy7057         211 IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSAN  271 (557)
Q Consensus       211 l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~  271 (557)
                      ++-...-..|.+|.+.... ........+...+.+..+.+..+-  +.++.+..+.+|+.+
T Consensus       186 ~lFv~Tt~~V~~y~l~gr~-p~~~~ld~~G~~lnCss~~~~t~q--fIca~~e~l~fY~sd  243 (933)
T KOG2114|consen  186 VLFVATTEQVMLYSLSGRT-PSLKVLDNNGISLNCSSFSDGTYQ--FICAGSEFLYFYDSD  243 (933)
T ss_pred             eEEEEecceeEEEEecCCC-cceeeeccCCccceeeecCCCCcc--EEEecCceEEEEcCC
Confidence            3444455668899888433 323334444444544444444332  233334456666554

>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex

Probab=97.10  E-value=0.098  Score=55.22  Aligned_cols=167  Identities=14%  Similarity=0.134  Sum_probs=94.1

Q ss_pred             eEEEEECCCCeEEEEEcccCCcEEEEEEcCCCEEEEEECCCeEEEEeCCCcEEEEE-------eCCCCCEEEEEEeCCCe
Q psy7057          60 TAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKTL-------TGHTDCVRGLAVLNDTD  132 (557)
Q Consensus        60 ~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~~~~~~~~l-------~~h~~~V~~l~~~~~~~  132 (557)
                      .|+||+. .|+.+.++.-..+.|.++.|..+..|+.-..||.++++|..|+....+       .-....+.+..+...|.
T Consensus        62 ~I~iys~-sG~ll~~i~w~~~~iv~~~wt~~e~LvvV~~dG~v~vy~~~G~~~fsl~~~i~~~~v~e~~i~~~~~~~~Gi  140 (410)
T PF04841_consen   62 SIQIYSS-SGKLLSSIPWDSGRIVGMGWTDDEELVVVQSDGTVRVYDLFGEFQFSLGEEIEEEKVLECRIFAIWFYKNGI  140 (410)
T ss_pred             EEEEECC-CCCEeEEEEECCCCEEEEEECCCCeEEEEEcCCEEEEEeCCCceeechhhhccccCcccccccccccCCCCE
Confidence            5889985 566666665445899999999988888889999999999777661111       11111222223333454


Q ss_pred             EEEEECCCeEEEEECCCCe-EEEEE---eC-----C--CC--cEEEEEEcCCEEEEEeCCCeEEEEECCCCceEeeCCcc
Q psy7057         133 FVSCSNDASIRVWDSTTGK-CVHTM---YG-----H--PN--FIYSVAAHGDLITSGGEDQCVCVYQNKAQNSFMIPAMS  199 (557)
Q Consensus       133 lvs~s~Dg~I~vwd~~~~~-~~~~~---~~-----h--~~--~V~~l~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~  199 (557)
                      ++ -..++.+.+..-.... ..+.+   ..     |  ..  .+..+..+....+....++.+.+.+......+. ...+
T Consensus       141 vv-Lt~~~~~~~v~n~~~~~~~~~~~~~p~~~~~~~~~~~~~~i~~l~~~~~~~i~~~~g~~i~~i~~~~~~~i~-~~~~  218 (410)
T PF04841_consen  141 VV-LTGNNRFYVVNNIDEPVKLRRLPEIPGLWTKFHWWPSWTVIPLLSSDRVVEILLANGETIYIIDENSFKQID-SDGP  218 (410)
T ss_pred             EE-ECCCCeEEEEeCccccchhhccccCCCcccccccccccccceEeecCcceEEEEecCCEEEEEEcccccccc-CCCC
Confidence            33 2334444444311111 11111   11     1  11  111111134455555566667655533322222 2458


Q ss_pred             EEEEEEcCCCc-EEEEEcCCcEEEEecCCCC
Q psy7057         200 VWAVAILPNSD-IVTGSSDGIVRVFSANPDR  229 (557)
Q Consensus       200 v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~  229 (557)
                      +..+++||+++ ++.-..+|.+.|.+.+-.+
T Consensus       219 i~~iavSpng~~iAl~t~~g~l~v~ssDf~~  249 (410)
T PF04841_consen  219 IIKIAVSPNGKFIALFTDSGNLWVVSSDFSE  249 (410)
T ss_pred             eEEEEECCCCCEEEEEECCCCEEEEECcccc
Confidence            99999999999 6667778999888765443

Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm

>KOG1008|consensus

Probab=97.10  E-value=0.00038  Score=73.37  Aligned_cols=194  Identities=15%  Similarity=0.156  Sum_probs=122.2

Q ss_pred             CCcEEEEEEcCCC---EEEEEECCCeEEEEeCCC---cEEEEEeCCCCCEEEEEEeCC--CeEEEEE----CCCeEEEEE
Q psy7057          79 EMAVWGVIQLANG---IIVTGCADKTIKLHSEEG---EFLKTLTGHTDCVRGLAVLND--TDFVSCS----NDASIRVWD  146 (557)
Q Consensus        79 ~~~V~~l~~~~~~---~l~sgs~dg~I~vwd~~~---~~~~~l~~h~~~V~~l~~~~~--~~lvs~s----~Dg~I~vwd  146 (557)
                      ...+.|+++.-+.   .++.|..+|.|-+-....   .......+|....++++|.+-  +.|++|-    .|..+.|||
T Consensus        56 tqy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwd  135 (783)
T KOG1008|consen   56 TQYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWD  135 (783)
T ss_pred             CCCceeehhhcCCchhhhhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCcccee
Confidence            3456666655432   788899999998876221   112344567888999999875  2244432    456799999


Q ss_pred             CCCC--eEE--EEEeC-CCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC--ceEeeCCccEEEEEEcC-CCcEEEEEc
Q psy7057         147 STTG--KCV--HTMYG-HPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ--NSFMIPAMSVWAVAILP-NSDIVTGSS  216 (557)
Q Consensus       147 ~~~~--~~~--~~~~~-h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~--~~~~~~~~~v~~v~~~p-~g~l~sg~~  216 (557)
                      +.++  .+.  ..|.+ ......+++|  +.+++++|...+.+.++|++..  +.....+..+..+.+.| .+..++...
T Consensus       136 i~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~~~~~svnTk~vqG~tVdp~~~nY~cs~~  215 (783)
T KOG1008|consen  136 INSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLDSVSSVNTKYVQGITVDPFSPNYFCSNS  215 (783)
T ss_pred             cccccCCCccccccccccccCccccccccCcchhhcccccchhhhhhhhhhhhhhhhhhhhhcccceecCCCCCceeccc
Confidence            9876  222  12222 2334457787  5668889999999999998843  22333344678888888 455777778


Q ss_pred             CCcEEEEecC-C-CCcchhHHHhc--ccceeEEEeccCCCceeEEEEeCC-CcEEEEecCC
Q psy7057         217 DGIVRVFSAN-P-DRQAEDAVQAQ--YAEEVKKLKSANEQEIGGVKVSDD-GIVRVFSANP  272 (557)
Q Consensus       217 Dg~I~iwd~~-~-~~~~~~~~~~~--~~~~v~~l~~~~~~~~~~vs~s~D-G~IrvW~~~~  272 (557)
                      ||.|-+||.. . ..+........  ....+..+.+.+...-.+++.+.| ++||.+++..
T Consensus       216 dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~~  276 (783)
T KOG1008|consen  216 DGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDICV  276 (783)
T ss_pred             cCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEecccc
Confidence            9999999942 1 11111111111  112366777887776556666654 6888888653

>KOG4649|consensus

Probab=97.03  E-value=0.26  Score=47.26  Aligned_cols=128  Identities=9%  Similarity=0.015  Sum_probs=81.1

Q ss_pred             cCCCc--EEEEECCCcEEEEcCCC--------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEE
Q psy7057          21 TPDGC--ILSASRDKSAKLWKPND--------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWG   84 (557)
Q Consensus        21 spdg~--l~sgs~Dg~V~iWd~~~--------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~   84 (557)
                      .+|.+  ++.||..+.+.--|..+              .+.---+++++.|+..|.+.+.+.++|.....+..-...=..
T Consensus        19 ~~dskT~v~igSHs~~~~avd~~sG~~~We~ilg~RiE~sa~vvgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk~~   98 (354)
T KOG4649|consen   19 CNDSKTLVVIGSHSGIVIAVDPQSGNLIWEAILGVRIECSAIVVGDFVVLGCYSGGLYFLCVKTGSQIWNFVILETVKVR   98 (354)
T ss_pred             ecCCceEEEEecCCceEEEecCCCCcEEeehhhCceeeeeeEEECCEEEEEEccCcEEEEEecchhheeeeeehhhhccc
Confidence            34444  56777777777666665              111113678999999999999999999877766543221112


Q ss_pred             EEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeC-CCeEEEEECCCeEEEEECC
Q psy7057          85 VIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLN-DTDFVSCSNDASIRVWDST  148 (557)
Q Consensus        85 l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~-~~~lvs~s~Dg~I~vwd~~  148 (557)
                      ....+++ ++..|+.|++.+..| .+..++.+.+.-.....+-++.+ ++.+..+...|.+.--...
T Consensus        99 a~~d~~~glIycgshd~~~yalD~~~~~cVykskcgG~~f~sP~i~~g~~sly~a~t~G~vlavt~~  165 (354)
T KOG4649|consen   99 AQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSKCGGGTFVSPVIAPGDGSLYAAITAGAVLAVTKN  165 (354)
T ss_pred             eEEcCCCceEEEecCCCcEEEecccccceEEecccCCceeccceecCCCceEEEEeccceEEEEccC
Confidence            2233444 999999999999999 56667777654333333334444 4556655555655544433

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=97.00  E-value=0.25  Score=51.72  Aligned_cols=191  Identities=14%  Similarity=0.102  Sum_probs=109.1

Q ss_pred             cEEEEEEcCCC-EEEEEECCCeEEEEe--C---CC---------------------------------------cEEEEE
Q psy7057          81 AVWGVIQLANG-IIVTGCADKTIKLHS--E---EG---------------------------------------EFLKTL  115 (557)
Q Consensus        81 ~V~~l~~~~~~-~l~sgs~dg~I~vwd--~---~~---------------------------------------~~~~~l  115 (557)
                      .|+++.|.++. .|+.|...|.+.+|.  .   .+                                       .+...+
T Consensus         3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~   82 (395)
T PF08596_consen    3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLL   82 (395)
T ss_dssp             -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE
T ss_pred             eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhhe
Confidence            46777777765 788888888887765  0   11                                       001112


Q ss_pred             eCCCCCEEEEEEeCCCeEEEEECCCeEEEEECCCCeEEEEEe--C------CCCcEEEEEE-------cC---CEEEEEe
Q psy7057         116 TGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMY--G------HPNFIYSVAA-------HG---DLITSGG  177 (557)
Q Consensus       116 ~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~~~~~~~--~------h~~~V~~l~~-------~~---~~l~s~s  177 (557)
                      ....++|++++.+.-|.++.|..+|.+.|.|+|....+..-.  .      ....++++.|       ++   -.+++|+
T Consensus        83 ~~~~g~vtal~~S~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vGT  162 (395)
T PF08596_consen   83 DAKQGPVTALKNSDIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVGT  162 (395)
T ss_dssp             ---S-SEEEEEE-BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEEEE
T ss_pred             eccCCcEeEEecCCCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEEEe
Confidence            334688999999877888899999999999999888776632  1      2346777776       22   2688999


Q ss_pred             CCCeEEEEECC--CCc--------eEeeCCccEEEEEEc-C-----------------CC----cEEEEEcCCcEEEEec
Q psy7057         178 EDQCVCVYQNK--AQN--------SFMIPAMSVWAVAIL-P-----------------NS----DIVTGSSDGIVRVFSA  225 (557)
Q Consensus       178 ~Dg~I~iwd~~--~~~--------~~~~~~~~v~~v~~~-p-----------------~g----~l~sg~~Dg~I~iwd~  225 (557)
                      +.|.+.+|.+-  ...        ....+..+|..+... .                 .+    .++..+.+..+|++..
T Consensus       163 n~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~vVvvSe~~irv~~~  242 (395)
T PF08596_consen  163 NSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPGYVVVVSESDIRVFKP  242 (395)
T ss_dssp             TTSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----EEEEEE-SSEEEEE-T
T ss_pred             CCCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCcEEEEEcccceEEEeC
Confidence            99999999842  111        111344555555432 1                 11    1666777888999998


Q ss_pred             CCCCcchhHHHhcccceeEEEecc----CCCceeEEEEeCCCcEEEEecCCC
Q psy7057         226 NPDRQAEDAVQAQYAEEVKKLKSA----NEQEIGGVKVSDDGIVRVFSANPD  273 (557)
Q Consensus       226 ~~~~~~~~~~~~~~~~~v~~l~~~----~~~~~~~vs~s~DG~IrvW~~~~~  273 (557)
                      ...+...... .. ......+...    ......+++...||.|+++++-.-
T Consensus       243 ~~~k~~~K~~-~~-~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~L  292 (395)
T PF08596_consen  243 PKSKGAHKSF-DD-PFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSL  292 (395)
T ss_dssp             T---EEEEE--SS--EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT-
T ss_pred             CCCcccceee-cc-ccccceEEEEeecccCCceEEEEEECCCcEEEEECCCc
Confidence            7765543222 11 1111112222    234566788899999999998754

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=96.95  E-value=0.017  Score=64.58  Aligned_cols=135  Identities=18%  Similarity=0.152  Sum_probs=95.2

Q ss_pred             CEEEEE-ECCCeEEEEECCCCeEEEEEcccCCc-EEEEEEcC------CCEEEEEECCCeEEEEe--CCCcEEEEEe---
Q psy7057          50 NTLLSA-SWDMTAKLWCLESQQCKLTIRQHEMA-VWGVIQLA------NGIIVTGCADKTIKLHS--EEGEFLKTLT---  116 (557)
Q Consensus        50 ~~l~sg-s~Dg~i~iwd~~~~~~~~~l~~h~~~-V~~l~~~~------~~~l~sgs~dg~I~vwd--~~~~~~~~l~---  116 (557)
                      ++|+.- .....|+-.|++.|+.+..+..|... |..++-..      ....+.|-.++.+..||  +.+..+..-.   
T Consensus       494 ~mil~~~~~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~~k~  573 (794)
T PF08553_consen  494 NMILLDPNNPNKLYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQSKQ  573 (794)
T ss_pred             ceEeecCCCCCceEEEecCCCcEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCCceeeccccc
Confidence            444443 45678999999999999999888654 66654322      12567788899999999  3443322211   


Q ss_pred             -CCCCCEEEEEEeCCCeEEEEECCCeEEEEECCCCeE-EEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEE
Q psy7057         117 -GHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKC-VHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQ  186 (557)
Q Consensus       117 -~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~~-~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd  186 (557)
                       ......+|++...+|.|+.||.+|.||+|| +.|+. ...+.+-..+|..|..  +|+++++.+ +..|.+++
T Consensus       574 Y~~~~~Fs~~aTt~~G~iavgs~~G~IRLyd-~~g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc-~tyLlLi~  645 (794)
T PF08553_consen  574 YSSKNNFSCFATTEDGYIAVGSNKGDIRLYD-RLGKRAKTALPGLGDPIIGIDVTADGKWILATC-KTYLLLID  645 (794)
T ss_pred             cccCCCceEEEecCCceEEEEeCCCcEEeec-ccchhhhhcCCCCCCCeeEEEecCCCcEEEEee-cceEEEEE
Confidence             234568899999999999999999999999 44443 3345566889999988  888766555 44566665

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=96.90  E-value=0.011  Score=62.58  Aligned_cols=74  Identities=18%  Similarity=0.138  Sum_probs=57.5

Q ss_pred             ccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEEEEECCCCe
Q psy7057          77 QHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGK  151 (557)
Q Consensus        77 ~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~  151 (557)
                      .....|.|++++|+. .++.|+.||+|++||........ ....-.++.++|+|+|. |++|+..|.+.+||+.-..
T Consensus       257 pL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~~-~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~ALsp  332 (545)
T PF11768_consen  257 PLPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVTLL-AKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMALSP  332 (545)
T ss_pred             ecCCcceEEecCcccceEEEEecCCeEEEEEcCCCeeee-eeecccceEEEEcCCCcEEEEEcCCceEEEEEeecCc
Confidence            367788899999977 99999999999999955443332 23455678899999987 5588888999999976443

>KOG3621|consensus

Probab=96.88  E-value=0.011  Score=63.53  Aligned_cols=136  Identities=10%  Similarity=0.046  Sum_probs=89.3

Q ss_pred             CCCCEEEEEECCCeEEEEECCCCeEE-EEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCC----cEEEE--E-eC
Q psy7057          47 AKVNTLLSASWDMTAKLWCLESQQCK-LTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEG----EFLKT--L-TG  117 (557)
Q Consensus        47 ~~~~~l~sgs~Dg~i~iwd~~~~~~~-~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~----~~~~~--l-~~  117 (557)
                      ....+++.|+.-|.+.+|+-..++.. ....+-...++.+..++.. +++.|+..|.|.++-...    .....  . +.
T Consensus        43 st~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~~~~~t~~d~~  122 (726)
T KOG3621|consen   43 ATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPRDLDYVTPCDKS  122 (726)
T ss_pred             cCCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCCcceeecccccc
Confidence            35788999999999999986554422 2222334455556667766 888899999999987221    11111  1 24


Q ss_pred             CCCCEEEEEEeCCCe-EEEEECCCeEEEEECCCC----eEEEEEeCCCCcEEEEEEcCCEEEEEeCCCeE
Q psy7057         118 HTDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTG----KCVHTMYGHPNFIYSVAAHGDLITSGGEDQCV  182 (557)
Q Consensus       118 h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~----~~~~~~~~h~~~V~~l~~~~~~l~s~s~Dg~I  182 (557)
                      |...|++++|++++. +.+|...|+|..-.+.+.    -..+.+..-.+.|-.+..-..+|+.++.-.++
T Consensus       123 ~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s~~~~~~~~q~il~~ds~IVQlD~~q~~LLVStl~r~~  192 (726)
T KOG3621|consen  123 HKCRVTALEWSKNGMKLYSGDSQGKVVLTELDSRQAFLSKSQEILSEDSEIVQLDYLQSYLLVSTLTRCI  192 (726)
T ss_pred             CCceEEEEEecccccEEeecCCCceEEEEEechhhhhccccceeeccCcceEEeecccceehHhhhhhhh
Confidence            788999999999976 889999999998877662    12233334567777787744444444443333

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=96.88  E-value=0.0082  Score=63.41  Aligned_cols=71  Identities=20%  Similarity=0.291  Sum_probs=57.4

Q ss_pred             CCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC-ceEeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCC
Q psy7057         158 GHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ-NSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPD  228 (557)
Q Consensus       158 ~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~-~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~  228 (557)
                      ..++.|.++++  +.+.++.|+.||+|.+||.... .......-....++|+|+|. +++|+..|.+.+||+.-.
T Consensus       257 pL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~~~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~ALs  331 (545)
T PF11768_consen  257 PLPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVTLLAKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMALS  331 (545)
T ss_pred             ecCCcceEEecCcccceEEEEecCCeEEEEEcCCCeeeeeeecccceEEEEcCCCcEEEEEcCCceEEEEEeecC
Confidence            46778888888  5678999999999999997666 33334445678999999999 778888899999998643

>KOG3621|consensus

Probab=96.81  E-value=0.16  Score=54.84  Aligned_cols=97  Identities=13%  Similarity=0.102  Sum_probs=71.6

Q ss_pred             CcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC-----------------CCCCCCCCEEEEEECCCeEEEEECCCCeE-
Q psy7057          11 HSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND-----------------LSPGAKVNTLLSASWDMTAKLWCLESQQC-   71 (557)
Q Consensus        11 H~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~-----------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~-   71 (557)
                      |...|.=-+++..++ ++.|+.-|.+.+|+...                 ...++...+++.|+..|.|.++-+....+ 
T Consensus        32 ~~~~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~  111 (726)
T KOG3621|consen   32 FPARVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPR  111 (726)
T ss_pred             CcceEEEEEeecCCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCC
Confidence            334444445555566 88999999999998765                 34455567788889999999998766421 


Q ss_pred             --EE--EE-cccCCcEEEEEEcCCC-EEEEEECCCeEEEEeC
Q psy7057          72 --KL--TI-RQHEMAVWGVIQLANG-IIVTGCADKTIKLHSE  107 (557)
Q Consensus        72 --~~--~l-~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~  107 (557)
                        +.  .. ..|...|+|++|++++ .+.+|...|+|..-.+
T Consensus       112 ~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L  153 (726)
T KOG3621|consen  112 DLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTEL  153 (726)
T ss_pred             cceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEe
Confidence              11  11 2378999999999999 9999999999887653

>KOG1832|consensus

Probab=96.74  E-value=0.0019  Score=70.43  Aligned_cols=124  Identities=10%  Similarity=0.118  Sum_probs=92.1

Q ss_pred             cEEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeC-CC-eEEE
Q psy7057         110 EFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGE-DQ-CVCV  184 (557)
Q Consensus       110 ~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~-Dg-~I~i  184 (557)
                      +..+++..|....+|++|+.+.. ++.|+..|.|+++++.+|........|.+.|+-+..  +|..+++.+. .. ...+
T Consensus      1092 r~w~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaL 1171 (1516)
T KOG1832|consen 1092 RSWRSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSAL 1171 (1516)
T ss_pred             ccchhhhccccceeeEEeecCCceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchHHH
Confidence            34566778889999999997754 889999999999999999999999999999999988  7776555443 33 4678


Q ss_pred             EECCCCceEeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchh
Q psy7057         185 YQNKAQNSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAED  233 (557)
Q Consensus       185 wd~~~~~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~  233 (557)
                      |+.++.......-..-.++.|+.... -+.|+.-....+||+.++.....
T Consensus      1172 W~~~s~~~~~Hsf~ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~t 1221 (1516)
T KOG1832|consen 1172 WDASSTGGPRHSFDEDKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQT 1221 (1516)
T ss_pred             hccccccCccccccccceeehhhhHHHHHhcccccceEEEecccCcHHHH
Confidence            99776422222223456778877655 44555556789999998876543

>smart00320 WD40 WD40 repeats

Probab=96.69  E-value=0.0062  Score=38.82  Aligned_cols=37  Identities=27%  Similarity=0.308  Sum_probs=25.5

Q ss_pred             eEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe
Q psy7057          70 QCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS  106 (557)
Q Consensus        70 ~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd  106 (557)
                      ++...+..|...|.++.|.+.+ .+++++.|+.+++|+
T Consensus         3 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~   40 (40)
T smart00320        3 ELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD   40 (40)
T ss_pred             EEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence            4455566677777777777755 777777777777774

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>KOG3617|consensus

Probab=96.59  E-value=0.045  Score=59.95  Aligned_cols=104  Identities=12%  Similarity=0.166  Sum_probs=76.6

Q ss_pred             CCCCCCCCEEEEEEC----CCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcEEEEE-e
Q psy7057          43 LSPGAKVNTLLSASW----DMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFLKTL-T  116 (557)
Q Consensus        43 ~~~~~~~~~l~sgs~----Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~~~l-~  116 (557)
                      .+|+|...+++.++-    .|.|.||- ++|++..... ..-.+++++|+|.. .|+.|-.-|.+.+|.......++. .
T Consensus        21 ~SWHPsePlfAVA~fS~er~GSVtIfa-dtGEPqr~Vt-~P~hatSLCWHpe~~vLa~gwe~g~~~v~~~~~~e~htv~~   98 (1416)
T KOG3617|consen   21 SSWHPSEPLFAVASFSPERGGSVTIFA-DTGEPQRDVT-YPVHATSLCWHPEEFVLAQGWEMGVSDVQKTNTTETHTVVE   98 (1416)
T ss_pred             cccCCCCceeEEEEecCCCCceEEEEe-cCCCCCcccc-cceehhhhccChHHHHHhhccccceeEEEecCCceeeeecc
Confidence            355666777777663    47788874 5666443322 12235679999988 788888889999998555555544 4


Q ss_pred             CCCCCEEEEEEeCCCe-EEEEECCCeEEEEECC
Q psy7057         117 GHTDCVRGLAVLNDTD-FVSCSNDASIRVWDST  148 (557)
Q Consensus       117 ~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~  148 (557)
                      .|..+|..+.|+++|. ++++..-|.+.+|...
T Consensus        99 th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d  131 (1416)
T KOG3617|consen   99 THPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD  131 (1416)
T ss_pred             CCCCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence            7999999999999976 7799999999999754

>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=96.57  E-value=0.099  Score=55.45  Aligned_cols=147  Identities=13%  Similarity=0.172  Sum_probs=81.2

Q ss_pred             EEcccCCcEEEEEEcCCCEEEEEECCCeEEEEeCCCcEEEEEeCCCCCEEEEEEeCCCeEEEEECCCeEEEEECCCCeEE
Q psy7057          74 TIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCV  153 (557)
Q Consensus        74 ~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~~~  153 (557)
                      .+......+..+.++|.+.+++.+.||.-.++....-.-.. .   +.-...+|.+.+.+++-....+|.++.--+.+..
T Consensus        27 ~lg~~~~~p~~ls~npngr~v~V~g~geY~iyt~~~~r~k~-~---G~g~~~vw~~~n~yAv~~~~~~I~I~kn~~~~~~  102 (443)
T PF04053_consen   27 ELGSCEIYPQSLSHNPNGRFVLVCGDGEYEIYTALAWRNKA-F---GSGLSFVWSSRNRYAVLESSSTIKIYKNFKNEVV  102 (443)
T ss_dssp             EEEE-SS--SEEEE-TTSSEEEEEETTEEEEEETTTTEEEE-E---EE-SEEEE-TSSEEEEE-TTS-EEEEETTEE-TT
T ss_pred             cCCCCCcCCeeEEECCCCCEEEEEcCCEEEEEEccCCcccc-c---CceeEEEEecCccEEEEECCCeEEEEEcCccccc
Confidence            34445556788999999955555888998888732222121 1   2234577888889998888899999742122221


Q ss_pred             EEEeCCCCcEEEEEEcCCEEEEEeCCCeEEEEECCCCceEeeCCc-cEEEEEEcCCCcEEEEEcCCcEEEEecCC
Q psy7057         154 HTMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQNSFMIPAM-SVWAVAILPNSDIVTGSSDGIVRVFSANP  227 (557)
Q Consensus       154 ~~~~~h~~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~-~v~~v~~~p~g~l~sg~~Dg~I~iwd~~~  227 (557)
                      ..+.. +..+..|-. |.+|...+.+ .|.+||..+.+.+..... .|..|.|++++.+++-..+..+.|++.+.
T Consensus       103 k~i~~-~~~~~~If~-G~LL~~~~~~-~i~~yDw~~~~~i~~i~v~~vk~V~Ws~~g~~val~t~~~i~il~~~~  174 (443)
T PF04053_consen  103 KSIKL-PFSVEKIFG-GNLLGVKSSD-FICFYDWETGKLIRRIDVSAVKYVIWSDDGELVALVTKDSIYILKYNL  174 (443)
T ss_dssp             ------SS-EEEEE--SSSEEEEETT-EEEEE-TTT--EEEEESS-E-EEEEE-TTSSEEEEE-S-SEEEEEE-H
T ss_pred             eEEcC-CcccceEEc-CcEEEEECCC-CEEEEEhhHcceeeEEecCCCcEEEEECCCCEEEEEeCCeEEEEEecc
Confidence            23331 223344433 7766666655 899999988855544333 48999999999965555566899988764

This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.

>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase

Probab=96.56  E-value=0.91  Score=44.86  Aligned_cols=216  Identities=13%  Similarity=0.088  Sum_probs=114.6

Q ss_pred             CCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCC---cEEE---------
Q psy7057          47 AKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEG---EFLK---------  113 (557)
Q Consensus        47 ~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~---~~~~---------  113 (557)
                      ..++.|+.|+.+| +.++++........+. +...|..+...++- .+++- .|+.++++++..   ....         
T Consensus         5 ~~~~~L~vGt~~G-l~~~~~~~~~~~~~i~-~~~~I~ql~vl~~~~~llvL-sd~~l~~~~L~~l~~~~~~~~~~~~~~~   81 (275)
T PF00780_consen    5 SWGDRLLVGTEDG-LYVYDLSDPSKPTRIL-KLSSITQLSVLPELNLLLVL-SDGQLYVYDLDSLEPVSTSAPLAFPKSR   81 (275)
T ss_pred             cCCCEEEEEECCC-EEEEEecCCccceeEe-ecceEEEEEEecccCEEEEE-cCCccEEEEchhhccccccccccccccc
Confidence            4578899998888 8888883322222222 23348899888865 33333 459999998321   1100         


Q ss_pred             ---EEeCCCCCEEEEE--EeCC-CeEEEEECCCeEEEEECCCC-----eEEEEEeCCCCcEEEEEEcCCEEEEEeCCCeE
Q psy7057         114 ---TLTGHTDCVRGLA--VLND-TDFVSCSNDASIRVWDSTTG-----KCVHTMYGHPNFIYSVAAHGDLITSGGEDQCV  182 (557)
Q Consensus       114 ---~l~~h~~~V~~l~--~~~~-~~lvs~s~Dg~I~vwd~~~~-----~~~~~~~~h~~~V~~l~~~~~~l~s~s~Dg~I  182 (557)
                         ........+...+  -... ...+.....++|.+|.....     +..+.+. -+..+.+++|.++.++.|..++ .
T Consensus        82 ~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~~-lp~~~~~i~~~~~~i~v~~~~~-f  159 (275)
T PF00780_consen   82 SLPTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLKEIS-LPDPPSSIAFLGNKICVGTSKG-F  159 (275)
T ss_pred             cccccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCcccccceeEEEE-cCCCcEEEEEeCCEEEEEeCCc-e
Confidence               0112233455554  1122 33555555668888876542     3455554 4578889999888788777554 6


Q ss_pred             EEEECCCC--ceEeeCCc------------cEEEEEEcCCCcEEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEec
Q psy7057         183 CVYQNKAQ--NSFMIPAM------------SVWAVAILPNSDIVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKS  248 (557)
Q Consensus       183 ~iwd~~~~--~~~~~~~~------------~v~~v~~~p~g~l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~  248 (557)
                      .+.|+.+.  ..+.....            ....+.-.+++.++.+. |..-...+.. ++... ...-.+......+..
T Consensus       160 ~~idl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Ll~~-~~~g~fv~~~-G~~~r-~~~i~W~~~p~~~~~  236 (275)
T PF00780_consen  160 YLIDLNTGSPSELLDPSDSSSSFKSRNSSSKPLGIFQLSDNEFLLCY-DNIGVFVNKN-GEPSR-KSTIQWSSAPQSVAY  236 (275)
T ss_pred             EEEecCCCCceEEeCccCCcchhhhcccCCCceEEEEeCCceEEEEe-cceEEEEcCC-CCcCc-ccEEEcCCchhEEEE
Confidence            77776644  33322111            12233333444554443 3333333443 33222 112223333333333


Q ss_pred             cCCCceeEEEEeCCCcEEEEecCCCh
Q psy7057         249 ANEQEIGGVKVSDDGIVRVFSANPDR  274 (557)
Q Consensus       249 ~~~~~~~~vs~s~DG~IrvW~~~~~~  274 (557)
                      ..   .++++.++ +.|-||++..++
T Consensus       237 ~~---pyli~~~~-~~iEV~~~~~~~  258 (275)
T PF00780_consen  237 SS---PYLIAFSS-NSIEVRSLETGE  258 (275)
T ss_pred             EC---CEEEEECC-CEEEEEECcCCc
Confidence            22   24555555 449999988764

These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity

>KOG3617|consensus

Probab=96.53  E-value=0.064  Score=58.79  Aligned_cols=89  Identities=15%  Similarity=0.097  Sum_probs=71.4

Q ss_pred             EEEcCCCc-EEEEE----CCCcEEEEcCCC--------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEccc
Q psy7057          18 LSVTPDGC-ILSAS----RDKSAKLWKPND--------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQH   78 (557)
Q Consensus        18 l~~spdg~-l~sgs----~Dg~V~iWd~~~--------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h   78 (557)
                      ..|+|..- ++.++    +.|+|.||--..              ++|+|..-.|+.|-.-|.+.+|...+.+.-.....|
T Consensus        21 ~SWHPsePlfAVA~fS~er~GSVtIfadtGEPqr~Vt~P~hatSLCWHpe~~vLa~gwe~g~~~v~~~~~~e~htv~~th  100 (1416)
T KOG3617|consen   21 SSWHPSEPLFAVASFSPERGGSVTIFADTGEPQRDVTYPVHATSLCWHPEEFVLAQGWEMGVSDVQKTNTTETHTVVETH  100 (1416)
T ss_pred             cccCCCCceeEEEEecCCCCceEEEEecCCCCCcccccceehhhhccChHHHHHhhccccceeEEEecCCceeeeeccCC
Confidence            46888766 44443    568888883221              788888778888888899999998876666666779


Q ss_pred             CCcEEEEEEcCCC-EEEEEECCCeEEEEe
Q psy7057          79 EMAVWGVIQLANG-IIVTGCADKTIKLHS  106 (557)
Q Consensus        79 ~~~V~~l~~~~~~-~l~sgs~dg~I~vwd  106 (557)
                      ..+|..+.|+++| .++++..-|.+.+|.
T Consensus       101 ~a~i~~l~wS~~G~~l~t~d~~g~v~lwr  129 (1416)
T KOG3617|consen  101 PAPIQGLDWSHDGTVLMTLDNPGSVHLWR  129 (1416)
T ss_pred             CCCceeEEecCCCCeEEEcCCCceeEEEE
Confidence            9999999999999 999999999999997

>KOG1008|consensus

Probab=96.34  E-value=0.00099  Score=70.37  Aligned_cols=197  Identities=16%  Similarity=0.206  Sum_probs=114.5

Q ss_pred             eccCcccEEEEEEcCCCc--EEEE----ECCCcEEEEcCCCCCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCc
Q psy7057           8 LYGHSMDVRSLSVTPDGC--ILSA----SRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMA   81 (557)
Q Consensus         8 l~gH~~~V~~l~~spdg~--l~sg----s~Dg~V~iWd~~~~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~   81 (557)
                      ..+|...+++++|++-..  ||+|    -.|..+.|||+.+.-..|.....++++                     ....
T Consensus        98 tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi~s~ltvPke~~~fs~~---------------------~l~g  156 (783)
T KOG1008|consen   98 TPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDINSLLTVPKESPLFSSS---------------------TLDG  156 (783)
T ss_pred             cccccccccccccccccHHHHHhhhhhhcccCCccceecccccCCCccccccccc---------------------cccC
Confidence            345667778888877533  4444    234556666665532233333333321                     1222


Q ss_pred             EEEEEEcCCC-EEEEEECCCeEEEEeCCCcEEEEEeCCCCCEEEEEEeC-CCeEEEEECCCeEEEEE-CCCC-eEEEEEe
Q psy7057          82 VWGVIQLANG-IIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLN-DTDFVSCSNDASIRVWD-STTG-KCVHTMY  157 (557)
Q Consensus        82 V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~-~~~lvs~s~Dg~I~vwd-~~~~-~~~~~~~  157 (557)
                      ..+++|..+. ++++|.....+.++|....+.....-.+..+..+.+.| .+.+++...|+.|.+|| .++- .++..+.
T Consensus       157 qns~cwlrd~klvlaGm~sr~~~ifdlRqs~~~~~svnTk~vqG~tVdp~~~nY~cs~~dg~iAiwD~~rnienpl~~i~  236 (783)
T KOG1008|consen  157 QNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLDSVSSVNTKYVQGITVDPFSPNYFCSNSDGDIAIWDTYRNIENPLQIIL  236 (783)
T ss_pred             ccccccccCcchhhcccccchhhhhhhhhhhhhhhhhhhhhcccceecCCCCCceeccccCceeeccchhhhccHHHHHh
Confidence            3367777666 88899999999999976555544444556678888888 45577777799999999 3322 2222222


Q ss_pred             CC----CCcEEEEEEc---CCEEEEEeC-CCeEEEEECCCC---------ce--------EeeCC--ccEEEEEEcCCC-
Q psy7057         158 GH----PNFIYSVAAH---GDLITSGGE-DQCVCVYQNKAQ---------NS--------FMIPA--MSVWAVAILPNS-  209 (557)
Q Consensus       158 ~h----~~~V~~l~~~---~~~l~s~s~-Dg~I~iwd~~~~---------~~--------~~~~~--~~v~~v~~~p~g-  209 (557)
                      ..    ...+..+++.   ...+++.+. .++|+.+++...         ..        ++...  ..|.+.+|++.. 
T Consensus       237 ~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~~v~t~~s~nn~~~~~~~s~~~~q~~~~~s~I~~f~wH~~s~  316 (783)
T KOG1008|consen  237 RNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDICVVGTEGSANNSVFVNYESKYPVQPNSQCSGIDFFTWHTASP  316 (783)
T ss_pred             hCCCCcccceeeEEeccCCcchhhhhccCcceEEEecccccCCcccccccceeeecccccccccccccceeecCcCcCCc
Confidence            11    2347888883   235666654 478999984321         01        11111  357777777655 


Q ss_pred             --cEEEEEcCCcEEEEec
Q psy7057         210 --DIVTGSSDGIVRVFSA  225 (557)
Q Consensus       210 --~l~sg~~Dg~I~iwd~  225 (557)
                        +.+++...-.+.-|++
T Consensus       317 ~er~il~~~nl~~~Df~V  334 (783)
T KOG1008|consen  317 TERQILGVINLQPKDFSV  334 (783)
T ss_pred             cceeEEeeccCChhhccc
Confidence              2455555555555554

>KOG2395|consensus

Probab=96.32  E-value=0.059  Score=56.31  Aligned_cols=133  Identities=14%  Similarity=0.110  Sum_probs=93.1

Q ss_pred             EEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC--------EEEEEECCCeEEEEe--CCCc-EEEEEeCC-
Q psy7057          51 TLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG--------IIVTGCADKTIKLHS--EEGE-FLKTLTGH-  118 (557)
Q Consensus        51 ~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~--------~l~sgs~dg~I~vwd--~~~~-~~~~l~~h-  118 (557)
                      .+.++.....++-.|++.|+.+....-|.. |.-+.+.|+.        .-+.|-.|..|.-||  ..+. .+..-.+| 
T Consensus       348 il~~~~~~~~l~klDIE~GKIVeEWk~~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~~q~kq  426 (644)
T KOG2395|consen  348 ILMDGGEQDKLYKLDIERGKIVEEWKFEDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAVVQSKQ  426 (644)
T ss_pred             EeeCCCCcCcceeeecccceeeeEeeccCC-cceeeccCCcchhcccccccEEeecCCceEEecccccCcceeeeeeccc
Confidence            344566667788889999999999887776 7777777754        234567788899999  3343 33333333 


Q ss_pred             ---CCCEEEEEEeCCCeEEEEECCCeEEEEECCCCeE-EEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEE
Q psy7057         119 ---TDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKC-VHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQ  186 (557)
Q Consensus       119 ---~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~~-~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd  186 (557)
                         .....|.+-..+|.++.||.+|.||+||- .+.. ...+.+-..+|..|..  +|++|++.+ +..+.+-+
T Consensus       427 y~~k~nFsc~aTT~sG~IvvgS~~GdIRLYdr-i~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc-~tyLlLi~  498 (644)
T KOG2395|consen  427 YSTKNNFSCFATTESGYIVVGSLKGDIRLYDR-IGRRAKTALPGLGDAIKHVDVTADGKWILATC-KTYLLLID  498 (644)
T ss_pred             cccccccceeeecCCceEEEeecCCcEEeehh-hhhhhhhcccccCCceeeEEeeccCcEEEEec-ccEEEEEE
Confidence               34577888888899999999999999994 4443 3345677788887776  788666544 44555555

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=96.21  E-value=0.14  Score=57.67  Aligned_cols=133  Identities=13%  Similarity=0.165  Sum_probs=91.5

Q ss_pred             EEEEECCCeEEEEe-CCCcEEEEEeCCCCC-EEEEEEeC------CCeEEEEECCCeEEEEECCCC--eEEEE-E--eCC
Q psy7057          93 IVTGCADKTIKLHS-EEGEFLKTLTGHTDC-VRGLAVLN------DTDFVSCSNDASIRVWDSTTG--KCVHT-M--YGH  159 (557)
Q Consensus        93 l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~-V~~l~~~~------~~~lvs~s~Dg~I~vwd~~~~--~~~~~-~--~~h  159 (557)
                      |........++-.| ..|+.+.....|... |..++-..      ...-+.|-.+..+..||.|-.  +++.. .  ...
T Consensus       497 l~~~~~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~~k~Y~~  576 (794)
T PF08553_consen  497 LLDPNNPNKLYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQSKQYSS  576 (794)
T ss_pred             eecCCCCCceEEEecCCCcEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCCceeecccccccc
Confidence            33334556777777 567888888877654 66654321      123556777888999999853  23321 1  123


Q ss_pred             CCcEEEEEEc-CCEEEEEeCCCeEEEEEC-CCC--ceEeeCCccEEEEEEcCCCcEEEEEcCCcEEEEec
Q psy7057         160 PNFIYSVAAH-GDLITSGGEDQCVCVYQN-KAQ--NSFMIPAMSVWAVAILPNSDIVTGSSDGIVRVFSA  225 (557)
Q Consensus       160 ~~~V~~l~~~-~~~l~s~s~Dg~I~iwd~-~~~--~~~~~~~~~v~~v~~~p~g~l~sg~~Dg~I~iwd~  225 (557)
                      .....|++-. ..+||+|+.+|.||+||. +..  ..+.+...+|..|.++.||+.+.|..+..|.+++.
T Consensus       577 ~~~Fs~~aTt~~G~iavgs~~G~IRLyd~~g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc~tyLlLi~t  646 (794)
T PF08553_consen  577 KNNFSCFATTEDGYIAVGSNKGDIRLYDRLGKRAKTALPGLGDPIIGIDVTADGKWILATCKTYLLLIDT  646 (794)
T ss_pred             CCCceEEEecCCceEEEEeCCCcEEeecccchhhhhcCCCCCCCeeEEEecCCCcEEEEeecceEEEEEE
Confidence            4456777774 448999999999999992 222  45567788999999999999666777778888875

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex

Probab=96.18  E-value=2.1  Score=45.14  Aligned_cols=53  Identities=13%  Similarity=0.105  Sum_probs=36.0

Q ss_pred             CCCEEEEEEeCCCeEE-EEECCCeEEEEECCCCeEEEEEeCC-CCcEEEEEEcCC
Q psy7057         119 TDCVRGLAVLNDTDFV-SCSNDASIRVWDSTTGKCVHTMYGH-PNFIYSVAAHGD  171 (557)
Q Consensus       119 ~~~V~~l~~~~~~~lv-s~s~Dg~I~vwd~~~~~~~~~~~~h-~~~V~~l~~~~~  171 (557)
                      .+++..|++||+++++ .-..+|.+.+.+..-.+.+..+... ......|.|.|+
T Consensus       216 ~~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~e~~~~~~~~p~~~~WCG~  270 (410)
T PF04841_consen  216 DGPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEKLCEFDTDSKSPPKQMAWCGN  270 (410)
T ss_pred             CCCeEEEEECCCCCEEEEEECCCCEEEEECcccceeEEeecCcCCCCcEEEEECC
Confidence            3579999999998844 5667789989886655666555533 344556666443

Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm

>PRK02888 nitrous-oxide reductase; Validated

Probab=96.14  E-value=0.6  Score=50.90  Aligned_cols=91  Identities=12%  Similarity=0.005  Sum_probs=61.0

Q ss_pred             CCCeEEEEeCCC-----cEEEEEeCCCCCEEEEEEeCCCeE--EEEECCCeEEEEECCCCeE------------EEEEeC
Q psy7057          98 ADKTIKLHSEEG-----EFLKTLTGHTDCVRGLAVLNDTDF--VSCSNDASIRVWDSTTGKC------------VHTMYG  158 (557)
Q Consensus        98 ~dg~I~vwd~~~-----~~~~~l~~h~~~V~~l~~~~~~~l--vs~s~Dg~I~vwd~~~~~~------------~~~~~~  158 (557)
                      .++.|.+.|...     ..+..+-.-......+.++|+|+.  +++..+.++.|.|+.+.+.            +.+..-
T Consensus       294 ~gn~V~VID~~t~~~~~~~v~~yIPVGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvaevev  373 (635)
T PRK02888        294 GGSKVPVVDGRKAANAGSALTRYVPVPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEPEL  373 (635)
T ss_pred             CCCEEEEEECCccccCCcceEEEEECCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCccceEEEeecc
Confidence            367899999433     333333345667889999999883  3666789999999887542            222221


Q ss_pred             CCCcEEEEEE--cCCEEEEEeCCCeEEEEECCC
Q psy7057         159 HPNFIYSVAA--HGDLITSGGEDQCVCVYQNKA  189 (557)
Q Consensus       159 h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~  189 (557)
                       ...-...+|  +|..+.|..-|..|..|++..
T Consensus       374 -GlGPLHTaFDg~G~aytslf~dsqv~kwn~~~  405 (635)
T PRK02888        374 -GLGPLHTAFDGRGNAYTTLFLDSQIVKWNIEA  405 (635)
T ss_pred             -CCCcceEEECCCCCEEEeEeecceeEEEehHH
Confidence             222334556  455778888999999999654

>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases

Probab=96.00  E-value=0.68  Score=50.17  Aligned_cols=182  Identities=12%  Similarity=0.153  Sum_probs=109.7

Q ss_pred             CCEEEEEECCCeEEEEECCCCeEEEEEcccCC------cE-E-EEEEcCCCEEEEEECCCeEEEEe-CCCcEEEEEeCCC
Q psy7057          49 VNTLLSASWDMTAKLWCLESQQCKLTIRQHEM------AV-W-GVIQLANGIIVTGCADKTIKLHS-EEGEFLKTLTGHT  119 (557)
Q Consensus        49 ~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~------~V-~-~l~~~~~~~l~sgs~dg~I~vwd-~~~~~~~~l~~h~  119 (557)
                      +..++.++.++.+.-.|..+++.+..+.....      .+ . .+....++.++.++.++.|..+| .+|+.+.......
T Consensus        61 ~g~vy~~~~~g~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~~~~~V~v~~~~g~v~AlD~~TG~~~W~~~~~~  140 (488)
T cd00216          61 DGDMYFTTSHSALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVAYWDPRKVFFGTFDGRLVALDAETGKQVWKFGNND  140 (488)
T ss_pred             CCEEEEeCCCCcEEEEECCCChhhceeCCCCCccccccccccCCcEEccCCeEEEecCCCeEEEEECCCCCEeeeecCCC
Confidence            56788888899999999999988877654322      01 0 11122226888889999999999 5788877765432


Q ss_pred             CC-----EE-EEEEeCCCeEEEEE---------CCCeEEEEECCCCeEEEEEeCCCC--------------------cEE
Q psy7057         120 DC-----VR-GLAVLNDTDFVSCS---------NDASIRVWDSTTGKCVHTMYGHPN--------------------FIY  164 (557)
Q Consensus       120 ~~-----V~-~l~~~~~~~lvs~s---------~Dg~I~vwd~~~~~~~~~~~~h~~--------------------~V~  164 (557)
                      ..     +. +..+. ++.++.++         .++.+.-+|..+|+.+-.+.....                    .++
T Consensus       141 ~~~~~~~i~ssP~v~-~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~~vw  219 (488)
T cd00216         141 QVPPGYTMTGAPTIV-KKLVIIGSSGAEFFACGVRGALRAYDVETGKLLWRFYTTEPDPNAFPTWGPDRQMWGPGGGTSW  219 (488)
T ss_pred             CcCcceEecCCCEEE-CCEEEEeccccccccCCCCcEEEEEECCCCceeeEeeccCCCcCCCCCCCCCcceecCCCCCcc
Confidence            21     11 11222 25555543         368899999999998877653211                    111


Q ss_pred             -EEEE--cCCEEEEEeCCC------------------eEEEEECCCCceEeeCC---ccEE------EEEEc----CCCc
Q psy7057         165 -SVAA--HGDLITSGGEDQ------------------CVCVYQNKAQNSFMIPA---MSVW------AVAIL----PNSD  210 (557)
Q Consensus       165 -~l~~--~~~~l~s~s~Dg------------------~I~iwd~~~~~~~~~~~---~~v~------~v~~~----p~g~  210 (557)
                       +.++  .+..++.++.++                  .|.-+|..+.+..-.+.   ...+      ...+.    -++.
T Consensus       220 ~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~~W~~~~~~~~~~~~~~~s~p~~~~~~~~~g~  299 (488)
T cd00216         220 ASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKVKWFYQTTPHDLWDYDGPNQPSLADIKPKDGK  299 (488)
T ss_pred             CCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCEEEEeeCCCCCCcccccCCCCeEEeccccCCC
Confidence             1233  345677776665                  68888876663222111   0011      00111    1232


Q ss_pred             ----EEEEEcCCcEEEEecCCCCcc
Q psy7057         211 ----IVTGSSDGIVRVFSANPDRQA  231 (557)
Q Consensus       211 ----l~sg~~Dg~I~iwd~~~~~~~  231 (557)
                          +++++.+|.+...|..+++..
T Consensus       300 ~~~~V~~g~~~G~l~ald~~tG~~~  324 (488)
T cd00216         300 PVPAIVHAPKNGFFYVLDRTTGKLI  324 (488)
T ss_pred             eeEEEEEECCCceEEEEECCCCcEe
Confidence                667888999999999888754

The alignment model contains an 8-bladed beta-propeller.

>KOG2395|consensus

Probab=95.65  E-value=0.23  Score=52.02  Aligned_cols=134  Identities=12%  Similarity=0.141  Sum_probs=93.6

Q ss_pred             EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe--------EEEEECCCeEEEEECCCC-e-EEEEEeCC-
Q psy7057          92 IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD--------FVSCSNDASIRVWDSTTG-K-CVHTMYGH-  159 (557)
Q Consensus        92 ~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~--------lvs~s~Dg~I~vwd~~~~-~-~~~~~~~h-  159 (557)
                      ++.++.....++-.| ..|+.+...+-|.+ |.-+.+.|+..        -+.|-.|..|.-||+|-. + .+..-++| 
T Consensus       348 il~~~~~~~~l~klDIE~GKIVeEWk~~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~~q~kq  426 (644)
T KOG2395|consen  348 ILMDGGEQDKLYKLDIERGKIVEEWKFEDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAVVQSKQ  426 (644)
T ss_pred             EeeCCCCcCcceeeecccceeeeEeeccCC-cceeeccCCcchhcccccccEEeecCCceEEecccccCcceeeeeeccc
Confidence            455566666666667 56777777776666 77777777643        234567788999998732 2 22223333 


Q ss_pred             ---CCcEEEEEE-cCCEEEEEeCCCeEEEEEC-CC--CceEeeCCccEEEEEEcCCCcEEEEEcCCcEEEEecC
Q psy7057         160 ---PNFIYSVAA-HGDLITSGGEDQCVCVYQN-KA--QNSFMIPAMSVWAVAILPNSDIVTGSSDGIVRVFSAN  226 (557)
Q Consensus       160 ---~~~V~~l~~-~~~~l~s~s~Dg~I~iwd~-~~--~~~~~~~~~~v~~v~~~p~g~l~sg~~Dg~I~iwd~~  226 (557)
                         .....|.+- ...++++||.+|.||+||. ..  ...+++...+|..|..+.+|+.+.|..+..+.+.+..
T Consensus       427 y~~k~nFsc~aTT~sG~IvvgS~~GdIRLYdri~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc~tyLlLi~t~  500 (644)
T KOG2395|consen  427 YSTKNNFSCFATTESGYIVVGSLKGDIRLYDRIGRRAKTALPGLGDAIKHVDVTADGKWILATCKTYLLLIDTL  500 (644)
T ss_pred             cccccccceeeecCCceEEEeecCCcEEeehhhhhhhhhcccccCCceeeEEeeccCcEEEEecccEEEEEEEe
Confidence               234455555 4458999999999999993 21  1567788889999999999997777888888887754

>PRK02888 nitrous-oxide reductase; Validated

Probab=95.56  E-value=0.45  Score=51.82  Aligned_cols=130  Identities=10%  Similarity=-0.018  Sum_probs=82.5

Q ss_pred             EEEEEcCCCc-EEEEECC----C-----------cEEEEcCCC-CCCCCCCCEEEEEECCCeEEEEECCC----C-eEEE
Q psy7057          16 RSLSVTPDGC-ILSASRD----K-----------SAKLWKPND-LSPGAKVNTLLSASWDMTAKLWCLES----Q-QCKL   73 (557)
Q Consensus        16 ~~l~~spdg~-l~sgs~D----g-----------~V~iWd~~~-~~~~~~~~~l~sgs~Dg~i~iwd~~~----~-~~~~   73 (557)
                      ..++++|+|+ +++.+.+    .           .+.++++.. -...+++++...  .+++|.+.|..+    + +.+.
T Consensus       238 d~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~vvfni~~iea~vkdGK~~~V--~gn~V~VID~~t~~~~~~~v~~  315 (635)
T PRK02888        238 DNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWVVVFNIARIEEAVKAGKFKTI--GGSKVPVVDGRKAANAGSALTR  315 (635)
T ss_pred             ccceECCCCCEEEEeccCcccCcceeeeccccCceEEEEchHHHHHhhhCCCEEEE--CCCEEEEEECCccccCCcceEE
Confidence            4567888888 4444421    1           233333332 123345665555  367899999988    3 4444


Q ss_pred             EEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEeCCCc-------------EEEEEeCCCCCEEEEEEeCCCe-EEEEE
Q psy7057          74 TIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHSEEGE-------------FLKTLTGHTDCVRGLAVLNDTD-FVSCS  137 (557)
Q Consensus        74 ~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~~~~-------------~~~~l~~h~~~V~~l~~~~~~~-lvs~s  137 (557)
                      .+. -......+.++|+|  .++++..+.++.|.|....             .+....- .......+|.++|. +.|..
T Consensus       316 yIP-VGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvaevev-GlGPLHTaFDg~G~aytslf  393 (635)
T PRK02888        316 YVP-VPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEPEL-GLGPLHTAFDGRGNAYTTLF  393 (635)
T ss_pred             EEE-CCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCccceEEEeecc-CCCcceEEECCCCCEEEeEe
Confidence            443 56677899999999  5667777999999994321             1222221 23345567888866 56888


Q ss_pred             CCCeEEEEECCC
Q psy7057         138 NDASIRVWDSTT  149 (557)
Q Consensus       138 ~Dg~I~vwd~~~  149 (557)
                      -|..|..||+.+
T Consensus       394 ~dsqv~kwn~~~  405 (635)
T PRK02888        394 LDSQIVKWNIEA  405 (635)
T ss_pred             ecceeEEEehHH
Confidence            999999999875

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=95.36  E-value=1.5  Score=42.77  Aligned_cols=154  Identities=9%  Similarity=0.090  Sum_probs=91.4

Q ss_pred             EEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEeCCCcEEEEEeCC-CCCEEEEEEeCCCeEEEEE-CCCeEEEEECC
Q psy7057          73 LTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHSEEGEFLKTLTGH-TDCVRGLAVLNDTDFVSCS-NDASIRVWDST  148 (557)
Q Consensus        73 ~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~~~~~~~~l~~h-~~~V~~l~~~~~~~lvs~s-~Dg~I~vwd~~  148 (557)
                      ..+.+-...+..++|.|+.  ++++....+.|...+.+|+.++.+.-. .+-.-.|++..++.++..+ .++.+.++++.
T Consensus        15 ~~l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~~G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~~   94 (248)
T PF06977_consen   15 KPLPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSLDGKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIFTID   94 (248)
T ss_dssp             EE-TT--S-EEEEEEETTTTEEEEEETTTTEEEEEETT--EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEEEE-
T ss_pred             eECCCccCCccccEEcCCCCeEEEEECCCCEEEEEcCCCCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEEEEe
Confidence            3455666679999999964  677777788888888999988876533 3557889998888888666 48889988873


Q ss_pred             CC------eEEEEEe-----CCCCcEEEEEEc--CCEEEEEeCCCeEEEEECCC---C-c-eE---------eeCCccEE
Q psy7057         149 TG------KCVHTMY-----GHPNFIYSVAAH--GDLITSGGEDQCVCVYQNKA---Q-N-SF---------MIPAMSVW  201 (557)
Q Consensus       149 ~~------~~~~~~~-----~h~~~V~~l~~~--~~~l~s~s~Dg~I~iwd~~~---~-~-~~---------~~~~~~v~  201 (557)
                      ..      .....+.     .+...+-.++++  ++.|+.+-+..-..+|....   . . ..         ......+.
T Consensus        95 ~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~S  174 (248)
T PF06977_consen   95 DDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFVRDLS  174 (248)
T ss_dssp             ---TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH-HT--SS---
T ss_pred             ccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeeccccccccccceecccc
Confidence            21      1112222     244568899994  45666667766666665332   1 1 00         11223578


Q ss_pred             EEEEcCCCc--EEEEEcCCcEEEEecC
Q psy7057         202 AVAILPNSD--IVTGSSDGIVRVFSAN  226 (557)
Q Consensus       202 ~v~~~p~g~--l~sg~~Dg~I~iwd~~  226 (557)
                      +++++|...  ++.+.....|.++|..
T Consensus       175 ~l~~~p~t~~lliLS~es~~l~~~d~~  201 (248)
T PF06977_consen  175 GLSYDPRTGHLLILSDESRLLLELDRQ  201 (248)
T ss_dssp             EEEEETTTTEEEEEETTTTEEEEE-TT
T ss_pred             ceEEcCCCCeEEEEECCCCeEEEECCC
Confidence            899999865  6677788888888854

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=95.28  E-value=3.2  Score=40.49  Aligned_cols=192  Identities=14%  Similarity=0.140  Sum_probs=102.7

Q ss_pred             EEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCCCCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEccc-CCcEE
Q psy7057           6 TALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQH-EMAVW   83 (557)
Q Consensus         6 ~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h-~~~V~   83 (557)
                      +.|.+-...+..|+|.|+.. |++.                         ....+.|...+. +|+.+..+.-. ....-
T Consensus        15 ~~l~g~~~e~SGLTy~pd~~tLfaV-------------------------~d~~~~i~els~-~G~vlr~i~l~g~~D~E   68 (248)
T PF06977_consen   15 KPLPGILDELSGLTYNPDTGTLFAV-------------------------QDEPGEIYELSL-DGKVLRRIPLDGFGDYE   68 (248)
T ss_dssp             EE-TT--S-EEEEEEETTTTEEEEE-------------------------ETTTTEEEEEET-T--EEEEEE-SS-SSEE
T ss_pred             eECCCccCCccccEEcCCCCeEEEE-------------------------ECCCCEEEEEcC-CCCEEEEEeCCCCCCce
Confidence            45677667799999999743 4433                         333444545554 34555554332 35677


Q ss_pred             EEEEcCCCEEEEEE-CCCeEEEEeC--CCc-----EEEEEe-----CCCCCEEEEEEeCC-CeEEEEECCCeEEEEECCC
Q psy7057          84 GVIQLANGIIVTGC-ADKTIKLHSE--EGE-----FLKTLT-----GHTDCVRGLAVLND-TDFVSCSNDASIRVWDSTT  149 (557)
Q Consensus        84 ~l~~~~~~~l~sgs-~dg~I~vwd~--~~~-----~~~~l~-----~h~~~V~~l~~~~~-~~lvs~s~Dg~I~vwd~~~  149 (557)
                      .|++..++.++..+ .++.+.+++.  .+.     ....+.     .+...+-.++|.+. ++|+.+-...-.+++.++.
T Consensus        69 gI~y~g~~~~vl~~Er~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~  148 (248)
T PF06977_consen   69 GITYLGNGRYVLSEERDQRLYIFTIDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNG  148 (248)
T ss_dssp             EEEE-STTEEEEEETTTTEEEEEEE----TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEES
T ss_pred             eEEEECCCEEEEEEcCCCcEEEEEEeccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEcc
Confidence            88998888555555 4888888873  111     112221     24456899999987 5577777776666666543


Q ss_pred             ---CeEEEEE--eC------CCCcEEEEEE---cCCEEEEEeCCCeEEEEECCCC--ceEeeCC---------ccEEEEE
Q psy7057         150 ---GKCVHTM--YG------HPNFIYSVAA---HGDLITSGGEDQCVCVYQNKAQ--NSFMIPA---------MSVWAVA  204 (557)
Q Consensus       150 ---~~~~~~~--~~------h~~~V~~l~~---~~~~l~s~s~Dg~I~iwd~~~~--~~~~~~~---------~~v~~v~  204 (557)
                         ...+...  ..      .-..+.++++   .+.+++.+..+..|..+|....  ..+....         ...-.|+
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~d~S~l~~~p~t~~lliLS~es~~l~~~d~~G~~~~~~~L~~g~~gl~~~~~QpEGIa  228 (248)
T PF06977_consen  149 FPGGFDLFVSDDQDLDDDKLFVRDLSGLSYDPRTGHLLILSDESRLLLELDRQGRVVSSLSLDRGFHGLSKDIPQPEGIA  228 (248)
T ss_dssp             TT-SS--EEEE-HHHH-HT--SS---EEEEETTTTEEEEEETTTTEEEEE-TT--EEEEEE-STTGGG-SS---SEEEEE
T ss_pred             ccCccceeeccccccccccceeccccceEEcCCCCeEEEEECCCCeEEEECCCCCEEEEEEeCCcccCcccccCCccEEE
Confidence               2222211  11      2234677777   3457778888888988884433  2222222         2467899


Q ss_pred             EcCCCcEEEEEcCCcEEEE
Q psy7057         205 ILPNSDIVTGSSDGIVRVF  223 (557)
Q Consensus       205 ~~p~g~l~sg~~Dg~I~iw  223 (557)
                      +.++|.|...++-+..++|
T Consensus       229 ~d~~G~LYIvsEpNlfy~f  247 (248)
T PF06977_consen  229 FDPDGNLYIVSEPNLFYRF  247 (248)
T ss_dssp             E-TT--EEEEETTTEEEEE
T ss_pred             ECCCCCEEEEcCCceEEEe
Confidence            9999998888888777665

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

>KOG4640|consensus

Probab=95.23  E-value=0.058  Score=57.47  Aligned_cols=83  Identities=20%  Similarity=0.129  Sum_probs=62.9

Q ss_pred             CCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEE-EEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEE-EeCCCC
Q psy7057          45 PGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVW-GVIQLANG-IIVTGCADKTIKLHS-EEGEFLKT-LTGHTD  120 (557)
Q Consensus        45 ~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~-~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~-l~~h~~  120 (557)
                      ++|.-+.+|.+..+|.+.+..+. .+.+.++.-|...++ +++|.|+| .|+.|-.||+|++.| ..+..+.. ...-..
T Consensus        28 wnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l~~~~~s~e~  106 (665)
T KOG4640|consen   28 WNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRLVSFLFSVET  106 (665)
T ss_pred             EcCccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCceecccccccc
Confidence            34557788888888888888877 677888886776776 99999999 999999999999999 44444443 223445


Q ss_pred             CEEEEEEe
Q psy7057         121 CVRGLAVL  128 (557)
Q Consensus       121 ~V~~l~~~  128 (557)
                      .|.++-|.
T Consensus       107 ~is~~~w~  114 (665)
T KOG4640|consen  107 DISKGIWD  114 (665)
T ss_pred             chheeecc
Confidence            67777775

>KOG4640|consensus

Probab=95.21  E-value=0.12  Score=55.28  Aligned_cols=91  Identities=15%  Similarity=0.077  Sum_probs=73.2

Q ss_pred             CCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcEEEEEeCCCCCEE-EEEEeCCCe-EEEEECCCeEEEEECCCCeEEEE
Q psy7057          79 EMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFLKTLTGHTDCVR-GLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHT  155 (557)
Q Consensus        79 ~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~~~l~~h~~~V~-~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~~~~  155 (557)
                      ...+.-+.|+|.- +||.+..+|.+.+...+...+.++.-|...++ +++|.|+|+ ++.|-.||+|++.|+.++..+..
T Consensus        20 ~~~i~~~ewnP~~dLiA~~t~~gelli~R~n~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l~~   99 (665)
T KOG4640|consen   20 PINIKRIEWNPKMDLIATRTEKGELLIHRLNWQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRLVS   99 (665)
T ss_pred             ccceEEEEEcCccchhheeccCCcEEEEEeccceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCceec
Confidence            3456778999977 99999999999998877888888887777777 999999998 55888999999999999887766


Q ss_pred             Ee-CCCCcEEEEEEc
Q psy7057         156 MY-GHPNFIYSVAAH  169 (557)
Q Consensus       156 ~~-~h~~~V~~l~~~  169 (557)
                      +. .....|.++-|+
T Consensus       100 ~~~s~e~~is~~~w~  114 (665)
T KOG4640|consen  100 FLFSVETDISKGIWD  114 (665)
T ss_pred             cccccccchheeecc
Confidence            32 234556666664

>KOG2444|consensus

Probab=95.21  E-value=0.05  Score=51.10  Aligned_cols=123  Identities=14%  Similarity=0.144  Sum_probs=71.9

Q ss_pred             EEEEECCCcEEEEcCCC--------------CCCCCCCCEEEEEECCCeEEEEECCCCeEE-EEEcccCCcEEEEEEc-C
Q psy7057          26 ILSASRDKSAKLWKPND--------------LSPGAKVNTLLSASWDMTAKLWCLESQQCK-LTIRQHEMAVWGVIQL-A   89 (557)
Q Consensus        26 l~sgs~Dg~V~iWd~~~--------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~-~~l~~h~~~V~~l~~~-~   89 (557)
                      |..-|.||.|+-+++..              +..-.-...+++|+.+|.|.+|.+.-.... .....-...|.++.-. .
T Consensus        33 l~~~sa~~~v~~~~~~k~k~s~rse~~~~e~~~v~~~~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~~~  112 (238)
T KOG2444|consen   33 LRATSADGLVRERKVRKHKESCRSERFIDEGQRVVTASAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPNGR  112 (238)
T ss_pred             hccccCCcccccchhhhhhhhhhhhhhhhcceeecccCceEEeecccceEEEecCCccchHHHhhhcccccceecccccc
Confidence            44667788888877665              222233567899999999999987622111 1111122333333322 2


Q ss_pred             CC-EEEEEECCCeEEEEeC-CCcEEEEEeCCC-CCEEEEEEeCCCe-EEEE--ECCCeEEEEECC
Q psy7057          90 NG-IIVTGCADKTIKLHSE-EGEFLKTLTGHT-DCVRGLAVLNDTD-FVSC--SNDASIRVWDST  148 (557)
Q Consensus        90 ~~-~l~sgs~dg~I~vwd~-~~~~~~~l~~h~-~~V~~l~~~~~~~-lvs~--s~Dg~I~vwd~~  148 (557)
                      ++ +.+++++|+.|+.|+. ..+.+.....|. .++..+..+..++ +.++  |.|..++.|++.
T Consensus       113 ~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve  177 (238)
T KOG2444|consen  113 DSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESGEELIVVGSDEFLKIADTSHDRVLKKWNVE  177 (238)
T ss_pred             ccceeEEeccCCceeeeccccCceeeeeccccCCCcceeEEecCCceEEeeccccchhhhhcchh
Confidence            33 8899999999999994 444444444565 3444444443333 3344  566666666654

>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit

Probab=95.18  E-value=1.1  Score=45.57  Aligned_cols=131  Identities=11%  Similarity=0.123  Sum_probs=78.4

Q ss_pred             CeEEEEECCCC----eEEEEE--eCCCCcEEEEEEcCCEEEEEeCCCeEEEEECCCCc---eEee--CCccEEEEEEcCC
Q psy7057         140 ASIRVWDSTTG----KCVHTM--YGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQN---SFMI--PAMSVWAVAILPN  208 (557)
Q Consensus       140 g~I~vwd~~~~----~~~~~~--~~h~~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~~~---~~~~--~~~~v~~v~~~p~  208 (557)
                      |.|.++++...    ..+..+  ....++|++++.-+..|+++. .+.|++|++....   ....  ....+.++....+
T Consensus        62 Gri~v~~i~~~~~~~~~l~~i~~~~~~g~V~ai~~~~~~lv~~~-g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~~~~  140 (321)
T PF03178_consen   62 GRILVFEISESPENNFKLKLIHSTEVKGPVTAICSFNGRLVVAV-GNKLYVYDLDNSKTLLKKAFYDSPFYITSLSVFKN  140 (321)
T ss_dssp             EEEEEEEECSS-----EEEEEEEEEESS-EEEEEEETTEEEEEE-TTEEEEEEEETTSSEEEEEEE-BSSSEEEEEEETT
T ss_pred             cEEEEEEEEcccccceEEEEEEEEeecCcceEhhhhCCEEEEee-cCEEEEEEccCcccchhhheecceEEEEEEecccc
Confidence            88999999874    122222  235789999998555444444 4789999854442   1111  2235666666533


Q ss_pred             CcEEEEEcCCcEEEEecCCCCc-chhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCC
Q psy7057         209 SDIVTGSSDGIVRVFSANPDRQ-AEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPD  273 (557)
Q Consensus       209 g~l~sg~~Dg~I~iwd~~~~~~-~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~  273 (557)
                       .+++|.....+.++..+.... ............+..+.+..... .++.+..+|.+.++...+.
T Consensus       141 -~I~vgD~~~sv~~~~~~~~~~~l~~va~d~~~~~v~~~~~l~d~~-~~i~~D~~gnl~~l~~~~~  204 (321)
T PF03178_consen  141 -YILVGDAMKSVSLLRYDEENNKLILVARDYQPRWVTAAEFLVDED-TIIVGDKDGNLFVLRYNPE  204 (321)
T ss_dssp             -EEEEEESSSSEEEEEEETTTE-EEEEEEESS-BEEEEEEEE-SSS-EEEEEETTSEEEEEEE-SS
T ss_pred             -EEEEEEcccCEEEEEEEccCCEEEEEEecCCCccEEEEEEecCCc-EEEEEcCCCeEEEEEECCC
Confidence             488888888888886654221 22222222234456666663333 7899999999999998754

CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....

>KOG2444|consensus

Probab=94.96  E-value=0.094  Score=49.31  Aligned_cols=82  Identities=11%  Similarity=0.112  Sum_probs=61.7

Q ss_pred             cEEEEECCCcEEEEcCCC------------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccC-CcEEEE
Q psy7057          25 CILSASRDKSAKLWKPND------------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHE-MAVWGV   85 (557)
Q Consensus        25 ~l~sgs~Dg~V~iWd~~~------------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~-~~V~~l   85 (557)
                      +++.|+.+|.|.+|.++.                  +.....+.+.+++++|+.||.|++.-++.+.....|+ .++...
T Consensus        72 ~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~e~~  151 (238)
T KOG2444|consen   72 KLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESGEEL  151 (238)
T ss_pred             eEEeecccceEEEecCCccchHHHhhhcccccceeccccccccceeEEeccCCceeeeccccCceeeeeccccCCCccee
Confidence            388999999999998874                  3444456688999999999999999888877777776 444444


Q ss_pred             EEcC-CCEEEEE--ECCCeEEEEe
Q psy7057          86 IQLA-NGIIVTG--CADKTIKLHS  106 (557)
Q Consensus        86 ~~~~-~~~l~sg--s~dg~I~vwd  106 (557)
                      ..+. +..+.++  |.|..++.|+
T Consensus       152 ivv~sd~~i~~a~~S~d~~~k~W~  175 (238)
T KOG2444|consen  152 IVVGSDEFLKIADTSHDRVLKKWN  175 (238)
T ss_pred             EEecCCceEEeeccccchhhhhcc
Confidence            4443 3366666  7777788887

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=94.74  E-value=4  Score=41.21  Aligned_cols=115  Identities=12%  Similarity=0.108  Sum_probs=75.2

Q ss_pred             EEEECC-CCeEEEEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEeCC---C----cE-EEEEeCCCCCEEEEEEeCC
Q psy7057          62 KLWCLE-SQQCKLTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHSEE---G----EF-LKTLTGHTDCVRGLAVLND  130 (557)
Q Consensus        62 ~iwd~~-~~~~~~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~~---~----~~-~~~l~~h~~~V~~l~~~~~  130 (557)
                      .||.+. .+..+..+..+-..-+.|+|+|++  ++++=+..+.|.-++..   +    .. ...+..+.+..-.++...+
T Consensus       144 ~lyr~~p~g~~~~l~~~~~~~~NGla~SpDg~tly~aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDad  223 (307)
T COG3386         144 SLYRVDPDGGVVRLLDDDLTIPNGLAFSPDGKTLYVADTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDAD  223 (307)
T ss_pred             eEEEEcCCCCEEEeecCcEEecCceEECCCCCEEEEEeCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCC
Confidence            344444 456666666666667789999999  44555555778877633   2    11 1222234456667778788


Q ss_pred             CeEE-EEECCC-eEEEEECCCCeEEEEEeCCCCcEEEEEEcC---CEEEEEe
Q psy7057         131 TDFV-SCSNDA-SIRVWDSTTGKCVHTMYGHPNFIYSVAAHG---DLITSGG  177 (557)
Q Consensus       131 ~~lv-s~s~Dg-~I~vwd~~~~~~~~~~~~h~~~V~~l~~~~---~~l~s~s  177 (557)
                      |.+. ++-.+| .|..|+.. ++.+..+.-+...+.+++|-|   +.|+..+
T Consensus       224 G~lw~~a~~~g~~v~~~~pd-G~l~~~i~lP~~~~t~~~FgG~~~~~L~iTs  274 (307)
T COG3386         224 GNLWVAAVWGGGRVVRFNPD-GKLLGEIKLPVKRPTNPAFGGPDLNTLYITS  274 (307)
T ss_pred             CCEEEecccCCceEEEECCC-CcEEEEEECCCCCCccceEeCCCcCEEEEEe
Confidence            8866 444444 89999977 999999887778889999933   5444333

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=94.74  E-value=5.3  Score=40.29  Aligned_cols=186  Identities=13%  Similarity=0.083  Sum_probs=104.1

Q ss_pred             EcCCCc--EEEEECCCcEEEEcCCC--------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcc----c-
Q psy7057          20 VTPDGC--ILSASRDKSAKLWKPND--------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQ----H-   78 (557)
Q Consensus        20 ~spdg~--l~sgs~Dg~V~iWd~~~--------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~----h-   78 (557)
                      |.++..  +.+--..+.|.-|+..+              ...-..+..|+++..  .+.+++.+++..+..+..    . 
T Consensus        32 w~~~~~~L~w~DI~~~~i~r~~~~~g~~~~~~~p~~~~~~~~~d~~g~Lv~~~~--g~~~~~~~~~~~~t~~~~~~~~~~  109 (307)
T COG3386          32 WDPDRGALLWVDILGGRIHRLDPETGKKRVFPSPGGFSSGALIDAGGRLIACEH--GVRLLDPDTGGKITLLAEPEDGLP  109 (307)
T ss_pred             CcCCCCEEEEEeCCCCeEEEecCCcCceEEEECCCCcccceeecCCCeEEEEcc--ccEEEeccCCceeEEeccccCCCC
Confidence            445544  33555667777777653              111112334444433  355666665554222211    1 


Q ss_pred             CCcEEEEEEcCCCEEEEEECC------------CeEEEEeCCCcEEEEEeCCCCCEEEEEEeCCCe-EE-EEECCCeEEE
Q psy7057          79 EMAVWGVIQLANGIIVTGCAD------------KTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTD-FV-SCSNDASIRV  144 (557)
Q Consensus        79 ~~~V~~l~~~~~~~l~sgs~d------------g~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~~~-lv-s~s~Dg~I~v  144 (557)
                      ....+.+...|+|.+..+...            |.+...+..+..++.+..+-..-+.|+|+|+++ |. +=+..+.|.-
T Consensus       110 ~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p~g~~~~l~~~~~~~~NGla~SpDg~tly~aDT~~~~i~r  189 (307)
T COG3386         110 LNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDPDGGVVRLLDDDLTIPNGLAFSPDGKTLYVADTPANRIHR  189 (307)
T ss_pred             cCCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcCCCCEEEeecCcEEecCceEECCCCCEEEEEeCCCCeEEE
Confidence            244566777888866655544            334444445666666666667778999999986 33 5555678888


Q ss_pred             EECCC--C----eE-EEEEeCCCCcEEEEEE--cCCEEEEEeCCC-eEEEEECCCC--ceEeeCCccEEEEEEcC
Q psy7057         145 WDSTT--G----KC-VHTMYGHPNFIYSVAA--HGDLITSGGEDQ-CVCVYQNKAQ--NSFMIPAMSVWAVAILP  207 (557)
Q Consensus       145 wd~~~--~----~~-~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg-~I~iwd~~~~--~~~~~~~~~v~~v~~~p  207 (557)
                      +++..  +    +. ...+....+..-.++.  +|.+.+++-.+| .|.+|+....  ..+..+...+.+++|--
T Consensus       190 ~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pdG~l~~~i~lP~~~~t~~~FgG  264 (307)
T COG3386         190 YDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPDGKLLGEIKLPVKRPTNPAFGG  264 (307)
T ss_pred             EecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEECCCCcEEEEEECCCCCCccceEeC
Confidence            87642  1    11 1122223344444455  566554444444 8999996622  56666666777887754

>KOG2079|consensus

Probab=94.68  E-value=0.097  Score=59.07  Aligned_cols=90  Identities=17%  Similarity=0.220  Sum_probs=69.1

Q ss_pred             EEEEEECCCeEEEEeCCCcEE--EEEeCCCCCEEEEEEeCCCeEE-EEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE
Q psy7057          92 IIVTGCADKTIKLHSEEGEFL--KTLTGHTDCVRGLAVLNDTDFV-SCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA  168 (557)
Q Consensus        92 ~l~sgs~dg~I~vwd~~~~~~--~~l~~h~~~V~~l~~~~~~~lv-s~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~  168 (557)
                      .++.|+..|.+-..|.++..-  ..=..-..+|++++|+.+|.++ .|-.+|.|.+||+..++.++.+..|..+...+-+
T Consensus       101 ~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~t~vi~  180 (1206)
T KOG2079|consen  101 PIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPVTGVIF  180 (1206)
T ss_pred             eEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCccceEEE
Confidence            688888889999888776533  2222345789999999999855 7778999999999999999998877776666554


Q ss_pred             -----cCCEEEEEeCCCe
Q psy7057         169 -----HGDLITSGGEDQC  181 (557)
Q Consensus       169 -----~~~~l~s~s~Dg~  181 (557)
                           .+..++++...|.
T Consensus       181 v~~t~~nS~llt~D~~Gs  198 (1206)
T KOG2079|consen  181 VGRTSQNSKLLTSDTGGS  198 (1206)
T ss_pred             EEEeCCCcEEEEccCCCc
Confidence                 3345777777776

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=94.68  E-value=6.5  Score=41.05  Aligned_cols=174  Identities=18%  Similarity=0.216  Sum_probs=111.2

Q ss_pred             EEEEEcCCCc--EEEEECCCcEEEEcCCC---------------CCCCCCCCEEEEEEC---CCeEEEEECCCCeEEEEE
Q psy7057          16 RSLSVTPDGC--ILSASRDKSAKLWKPND---------------LSPGAKVNTLLSASW---DMTAKLWCLESQQCKLTI   75 (557)
Q Consensus        16 ~~l~~spdg~--l~sgs~Dg~V~iWd~~~---------------~~~~~~~~~l~sgs~---Dg~i~iwd~~~~~~~~~l   75 (557)
                      ..+++++.+.  +++...++.|.+.|...               +.+++++..+..+..   ++++.+.|..+.+...+.
T Consensus        77 ~~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~~~~~~vG~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~  156 (381)
T COG3391          77 AGVAVNPAGNKVYVTTGDSNTVSVIDTATNTVLGSIPVGLGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATI  156 (381)
T ss_pred             cceeeCCCCCeEEEecCCCCeEEEEcCcccceeeEeeeccCCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEE
Confidence            3567777776  45566678999998554               566667766666655   689999999888888775


Q ss_pred             cccCCcEEEEEEcCCC--EEEEEECCCeEEEEeCCCcEEEE-----EeCCCCCEEEEEEeCCCe--EEEEEC--CCeEEE
Q psy7057          76 RQHEMAVWGVIQLANG--IIVTGCADKTIKLHSEEGEFLKT-----LTGHTDCVRGLAVLNDTD--FVSCSN--DASIRV  144 (557)
Q Consensus        76 ~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~~~~~~~~-----l~~h~~~V~~l~~~~~~~--lvs~s~--Dg~I~v  144 (557)
                      .....+ ..+++.|++  .+++-..++.|.+.|.++..+..     ...-......+.+.+++.  +++...  ++.+..
T Consensus       157 ~vG~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~  235 (381)
T COG3391         157 PVGNTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVRGSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSGSNNVLK  235 (381)
T ss_pred             ecCCCc-ceEEECCCCCeEEEEecCCCeEEEEeCCCcceeccccccccccCCCCceEEECCCCCEEEEEeccCCCceEEE
Confidence            544444 889999988  44444578999999966655443     122233456788888876  333333  368888


Q ss_pred             EECCCCeEEEEEeCCCC-cEEEEEE--cCCEEEEE-eCCCeEEEEECCCC
Q psy7057         145 WDSTTGKCVHTMYGHPN-FIYSVAA--HGDLITSG-GEDQCVCVYQNKAQ  190 (557)
Q Consensus       145 wd~~~~~~~~~~~~h~~-~V~~l~~--~~~~l~s~-s~Dg~I~iwd~~~~  190 (557)
                      .|..++.....-..-.. ....+..  ++..+.+. +..+.+.+-|..+.
T Consensus       236 id~~~~~v~~~~~~~~~~~~~~v~~~p~g~~~yv~~~~~~~V~vid~~~~  285 (381)
T COG3391         236 IDTATGNVTATDLPVGSGAPRGVAVDPAGKAAYVANSQGGTVSVIDGATD  285 (381)
T ss_pred             EeCCCceEEEeccccccCCCCceeECCCCCEEEEEecCCCeEEEEeCCCC
Confidence            88877766554211111 2223333  66665555 33467777775554

>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family

Probab=94.60  E-value=8.6  Score=42.07  Aligned_cols=169  Identities=11%  Similarity=0.101  Sum_probs=99.1

Q ss_pred             CCcEEEEECCCcEEEEcCCC--------CC----CC-------------CCCCEEEEEECCCeEEEEECCCCeEEEEEcc
Q psy7057          23 DGCILSASRDKSAKLWKPND--------LS----PG-------------AKVNTLLSASWDMTAKLWCLESQQCKLTIRQ   77 (557)
Q Consensus        23 dg~l~sgs~Dg~V~iWd~~~--------~~----~~-------------~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~   77 (557)
                      ++.++.++.++.|.-.|..+        ..    ..             -.+..++.++.|+.+.-.|.++|+.+.....
T Consensus        69 ~g~vyv~s~~g~v~AlDa~TGk~lW~~~~~~~~~~~~~~~~~~~~rg~av~~~~v~v~t~dg~l~ALDa~TGk~~W~~~~  148 (527)
T TIGR03075        69 DGVMYVTTSYSRVYALDAKTGKELWKYDPKLPDDVIPVMCCDVVNRGVALYDGKVFFGTLDARLVALDAKTGKVVWSKKN  148 (527)
T ss_pred             CCEEEEECCCCcEEEEECCCCceeeEecCCCCcccccccccccccccceEECCEEEEEcCCCEEEEEECCCCCEEeeccc
Confidence            45677777777777777665        00    00             0125688889999999999999998876542


Q ss_pred             c--C--CcEEEEEEcCCCEEEEEEC------CCeEEEEe-CCCcEEEEEeCC----------------------------
Q psy7057          78 H--E--MAVWGVIQLANGIIVTGCA------DKTIKLHS-EEGEFLKTLTGH----------------------------  118 (557)
Q Consensus        78 h--~--~~V~~l~~~~~~~l~sgs~------dg~I~vwd-~~~~~~~~l~~h----------------------------  118 (557)
                      .  .  ..+.+--...++.++.++.      +|.|..+| .+|+.+..+..-                            
T Consensus       149 ~~~~~~~~~tssP~v~~g~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~~~p~~~~~~~~~~~~~~~~~~~~tw~~~~~  228 (527)
T TIGR03075       149 GDYKAGYTITAAPLVVKGKVITGISGGEFGVRGYVTAYDAKTGKLVWRRYTVPGDMGYLDKADKPVGGEPGAKTWPGDAW  228 (527)
T ss_pred             ccccccccccCCcEEECCEEEEeecccccCCCcEEEEEECCCCceeEeccCcCCCcccccccccccccccccCCCCCCcc
Confidence            1  1  1121111111556666543      67888888 566665543211                            


Q ss_pred             ---CCCEE-EEEEeCC-CeEEEEE-C----CC-----------eEEEEECCCCeEEEEEeCCCCc-----------EEEE
Q psy7057         119 ---TDCVR-GLAVLND-TDFVSCS-N----DA-----------SIRVWDSTTGKCVHTMYGHPNF-----------IYSV  166 (557)
Q Consensus       119 ---~~~V~-~l~~~~~-~~lvs~s-~----Dg-----------~I~vwd~~~~~~~~~~~~h~~~-----------V~~l  166 (557)
                         ...++ .+++.++ +.+..+. +    ++           +|.-.|+++|+..-.++....-           +..+
T Consensus       229 ~~gg~~~W~~~s~D~~~~lvy~~tGnp~p~~~~~r~gdnl~~~s~vAld~~TG~~~W~~Q~~~~D~wD~d~~~~p~l~d~  308 (527)
T TIGR03075       229 KTGGGATWGTGSYDPETNLIYFGTGNPSPWNSHLRPGDNLYTSSIVARDPDTGKIKWHYQTTPHDEWDYDGVNEMILFDL  308 (527)
T ss_pred             ccCCCCccCceeEcCCCCeEEEeCCCCCCCCCCCCCCCCccceeEEEEccccCCEEEeeeCCCCCCccccCCCCcEEEEe
Confidence               11222 2345554 3333322 1    22           5777889999988777642221           1222


Q ss_pred             EEcCC---EEEEEeCCCeEEEEECCCCc
Q psy7057         167 AAHGD---LITSGGEDQCVCVYQNKAQN  191 (557)
Q Consensus       167 ~~~~~---~l~s~s~Dg~I~iwd~~~~~  191 (557)
                      ..+++   .++.+..+|.+++.|..+.+
T Consensus       309 ~~~G~~~~~v~~~~K~G~~~vlDr~tG~  336 (527)
T TIGR03075       309 KKDGKPRKLLAHADRNGFFYVLDRTNGK  336 (527)
T ss_pred             ccCCcEEEEEEEeCCCceEEEEECCCCc
Confidence            23555   67899999999999966553

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.

>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=94.50  E-value=7.5  Score=40.94  Aligned_cols=217  Identities=16%  Similarity=0.148  Sum_probs=115.7

Q ss_pred             cEEEEEEcCCCc-EE-EEECCCc----EEEEcCCC---------------CCCCCCCCEEEEEECCC-----------eE
Q psy7057          14 DVRSLSVTPDGC-IL-SASRDKS----AKLWKPND---------------LSPGAKVNTLLSASWDM-----------TA   61 (557)
Q Consensus        14 ~V~~l~~spdg~-l~-sgs~Dg~----V~iWd~~~---------------~~~~~~~~~l~sgs~Dg-----------~i   61 (557)
                      .+..+++||+|+ ++ +.+..|.    +++.|+.+               +.|.+++..|+-...+.           .|
T Consensus       125 ~~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v  204 (414)
T PF02897_consen  125 SLGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENPKFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQV  204 (414)
T ss_dssp             EEEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEEESEEEEECTTSSEEEEEECSTTTSS-CCGCCEEE
T ss_pred             EeeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCcccccccceEEEeCCCCEEEEEEeCcccccccCCCCcEE
Confidence            344678999998 44 4455554    99999977               56777777776665443           37


Q ss_pred             EEEECCCCeE--EEEEcccCC-c-EEEEEEcCCC--EEEEEECCCe---EEEEeCCCc-----EEEEEeCCCCCEEEEEE
Q psy7057          62 KLWCLESQQC--KLTIRQHEM-A-VWGVIQLANG--IIVTGCADKT---IKLHSEEGE-----FLKTLTGHTDCVRGLAV  127 (557)
Q Consensus        62 ~iwd~~~~~~--~~~l~~h~~-~-V~~l~~~~~~--~l~sgs~dg~---I~vwd~~~~-----~~~~l~~h~~~V~~l~~  127 (557)
                      +.|.+.+...  ...+..... . ...+..++++  +++.......   +.+.+....     ....+......+....-
T Consensus       205 ~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~~~~~~~~~~v~  284 (414)
T PF02897_consen  205 YRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLSPREDGVEYYVD  284 (414)
T ss_dssp             EEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEEESSSS-EEEEE
T ss_pred             EEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEEeCCCCceEEEEE
Confidence            7778776532  234443322 2 5678888888  4444444333   666664432     33444444444443333


Q ss_pred             eCCCeEEEEE----CCCeEEEEECCCCe---EEEEEeCCCC--cEEEEEEcCCEEE-EEeCCC--eEEEEECC-CC--ce
Q psy7057         128 LNDTDFVSCS----NDASIRVWDSTTGK---CVHTMYGHPN--FIYSVAAHGDLIT-SGGEDQ--CVCVYQNK-AQ--NS  192 (557)
Q Consensus       128 ~~~~~lvs~s----~Dg~I~vwd~~~~~---~~~~~~~h~~--~V~~l~~~~~~l~-s~s~Dg--~I~iwd~~-~~--~~  192 (557)
                      +..+.|..-+    ..+.|...++....   ....+..|..  .+..+...+++|+ .-..++  .|+++++. ..  ..
T Consensus       285 ~~~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~Lvl~~~~~~~~~l~v~~~~~~~~~~~  364 (414)
T PF02897_consen  285 HHGDRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDVSLEDVSLFKDYLVLSYRENGSSRLRVYDLDDGKESRE  364 (414)
T ss_dssp             EETTEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSEEEEEEEEETTEEEEEEEETTEEEEEEEETT-TEEEEE
T ss_pred             ccCCEEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCceeEEEEEEECCEEEEEEEECCccEEEEEECCCCcEEee
Confidence            3355544322    23567777777654   2334555554  5677777665544 445554  57888987 44  33


Q ss_pred             EeeCC-ccEEEEEEcCCCc--EEE-EEc--CCcEEEEecCCCCc
Q psy7057         193 FMIPA-MSVWAVAILPNSD--IVT-GSS--DGIVRVFSANPDRQ  230 (557)
Q Consensus       193 ~~~~~-~~v~~v~~~p~g~--l~s-g~~--Dg~I~iwd~~~~~~  230 (557)
                      +..+. +.|..+...+++.  +++ .|-  -+++..||+.+++.
T Consensus       365 ~~~p~~g~v~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~t~~~  408 (414)
T PF02897_consen  365 IPLPEAGSVSGVSGDFDSDELRFSYSSFTTPPTVYRYDLATGEL  408 (414)
T ss_dssp             EESSSSSEEEEEES-TT-SEEEEEEEETTEEEEEEEEETTTTCE
T ss_pred             ecCCcceEEeccCCCCCCCEEEEEEeCCCCCCEEEEEECCCCCE
Confidence            33332 2345555445554  333 332  35566777766543

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....

>PF14727 PHTB1_N: PTHB1 N-terminus

Probab=94.25  E-value=8.5  Score=40.54  Aligned_cols=121  Identities=12%  Similarity=0.158  Sum_probs=69.6

Q ss_pred             EEEEECCCcEEEEcCCC-------------------------CCCCCCCCEEEEEECCCeEEEEECCC--Ce-------E
Q psy7057          26 ILSASRDKSAKLWKPND-------------------------LSPGAKVNTLLSASWDMTAKLWCLES--QQ-------C   71 (557)
Q Consensus        26 l~sgs~Dg~V~iWd~~~-------------------------~~~~~~~~~l~sgs~Dg~i~iwd~~~--~~-------~   71 (557)
                      ++.||..|.+|||+...                         +.... ....++.-.-..+.+|.+..  +.       .
T Consensus        40 IivGS~~G~LrIy~P~~~~~~~~~lllE~~l~~PILqv~~G~F~s~~-~~~~LaVLhP~kl~vY~v~~~~g~~~~g~~~~  118 (418)
T PF14727_consen   40 IIVGSYSGILRIYDPSGNEFQPEDLLLETQLKDPILQVECGKFVSGS-EDLQLAVLHPRKLSVYSVSLVDGTVEHGNQYQ  118 (418)
T ss_pred             EEEeccccEEEEEccCCCCCCCccEEEEEecCCcEEEEEeccccCCC-CcceEEEecCCEEEEEEEEecCCCcccCcEEE
Confidence            89999999999999865                         11111 22222224455666776521  11       1


Q ss_pred             EEEEccc--CCcEEEEEEcC----C--CEEEEEECCCeEEEEeCCCcEEEEEeCCCCCEEEEEEeCC-CeEEEEECCCeE
Q psy7057          72 KLTIRQH--EMAVWGVIQLA----N--GIIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLND-TDFVSCSNDASI  142 (557)
Q Consensus        72 ~~~l~~h--~~~V~~l~~~~----~--~~l~sgs~dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~-~~lvs~s~Dg~I  142 (557)
                      +..+..|  ......+++-|    .  ..|+.=+-||.+.+++.+.-....+-...--...+++.+. ..|++++.+..+
T Consensus       119 L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~~f~~~lp~~llPgPl~Y~~~tDsfvt~sss~~l  198 (418)
T PF14727_consen  119 LELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESFAFSRFLPDFLLPGPLCYCPRTDSFVTASSSWTL  198 (418)
T ss_pred             EEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcEEEEEEcCCCCCCcCeEEeecCCEEEEecCceeE
Confidence            2222233  22333444433    2  2788999999999998665543333322222334556555 458888888788


Q ss_pred             EEEEC
Q psy7057         143 RVWDS  147 (557)
Q Consensus       143 ~vwd~  147 (557)
                      .-|..
T Consensus       199 ~~Yky  203 (418)
T PF14727_consen  199 ECYKY  203 (418)
T ss_pred             EEecH
Confidence            77754

>PRK13616 lipoprotein LpqB; Provisional

Probab=94.22  E-value=2.7  Score=46.44  Aligned_cols=167  Identities=13%  Similarity=0.163  Sum_probs=89.7

Q ss_pred             ccEEEEEEcCCCc-EEEEE------CCCcEEEE--cCCC-------------CCCCCCCCEEEEEECC-CeEEEE-----
Q psy7057          13 MDVRSLSVTPDGC-ILSAS------RDKSAKLW--KPND-------------LSPGAKVNTLLSASWD-MTAKLW-----   64 (557)
Q Consensus        13 ~~V~~l~~spdg~-l~sgs------~Dg~V~iW--d~~~-------------~~~~~~~~~l~sgs~D-g~i~iw-----   64 (557)
                      ..+.+.+++|+|+ ++...      .|..-.||  +...             .+|++++..|.+.+.. ..+++.     
T Consensus       350 ~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg~~~~lt~g~~~t~PsWspDG~~lw~v~dg~~~~~v~~~~~~  429 (591)
T PRK13616        350 GNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGGVAVQVLEGHSLTRPSWSLDADAVWVVVDGNTVVRVIRDPAT  429 (591)
T ss_pred             cCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCCcceeeecCCCCCCceECCCCCceEEEecCcceEEEeccCCC
Confidence            4678889999998 44322      24444444  4221             5677777777766533 122222     


Q ss_pred             ------ECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEE---Ee-CCCcE-E---EEEe-CCCCCEEEEEEe
Q psy7057          65 ------CLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKL---HS-EEGEF-L---KTLT-GHTDCVRGLAVL  128 (557)
Q Consensus        65 ------d~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~v---wd-~~~~~-~---~~l~-~h~~~V~~l~~~  128 (557)
                            ++..++...   .....|..+.|+|+| .++... ++.|.+   -. ..|.. +   ..+. +-...+.++.|.
T Consensus       430 gql~~~~vd~ge~~~---~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~G~~~l~~~~~l~~~l~~~~~~l~W~  505 (591)
T PRK13616        430 GQLARTPVDASAVAS---RVPGPISELQLSRDGVRAAMII-GGKVYLAVVEQTEDGQYALTNPREVGPGLGDTAVSLDWR  505 (591)
T ss_pred             ceEEEEeccCchhhh---ccCCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCCCceeecccEEeecccCCccccceEe
Confidence                  333322211   235579999999999 444433 467766   32 23331 1   1122 233446889999


Q ss_pred             CCCeEEEEECCCeEEEEECCC-CeEEEEEeC--CCCcEEEEEEcCCEEEEEeCCCeEE
Q psy7057         129 NDTDFVSCSNDASIRVWDSTT-GKCVHTMYG--HPNFIYSVAAHGDLITSGGEDQCVC  183 (557)
Q Consensus       129 ~~~~lvs~s~Dg~I~vwd~~~-~~~~~~~~~--h~~~V~~l~~~~~~l~s~s~Dg~I~  183 (557)
                      +++.|+.+..++...+|.+.- |.....+..  ....+.+|+-....++....++.+.
T Consensus       506 ~~~~L~V~~~~~~~~v~~v~vDG~~~~~~~~~n~~~~v~~vaa~~~~iyv~~~~g~~~  563 (591)
T PRK13616        506 TGDSLVVGRSDPEHPVWYVNLDGSNSDALPSRNLSAPVVAVAASPSTVYVTDARAVLQ  563 (591)
T ss_pred             cCCEEEEEecCCCCceEEEecCCccccccCCCCccCceEEEecCCceEEEEcCCceEE
Confidence            998877666555444554321 222222222  2456666666444455555555443

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=93.95  E-value=8  Score=39.21  Aligned_cols=213  Identities=16%  Similarity=0.163  Sum_probs=109.1

Q ss_pred             EEEEcCCCc-EEEE----------ECCCcEEEEcCCCCC-----------------------CCCCCCEEEEEE--CCCe
Q psy7057          17 SLSVTPDGC-ILSA----------SRDKSAKLWKPNDLS-----------------------PGAKVNTLLSAS--WDMT   60 (557)
Q Consensus        17 ~l~~spdg~-l~sg----------s~Dg~V~iWd~~~~~-----------------------~~~~~~~l~sgs--~Dg~   60 (557)
                      .+..+||++ ++++          -+.-.|.+||..++.                       .+.++++++...  -..+
T Consensus        40 ~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~~~~~~~~~~ls~dgk~~~V~N~TPa~S  119 (342)
T PF06433_consen   40 NVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQVVPYKNMFALSADGKFLYVQNFTPATS  119 (342)
T ss_dssp             EEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--BS--GGGEEE-TTSSEEEEEEESSSEE
T ss_pred             ceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchheecccccceEEccCCcEEEEEccCCCCe
Confidence            356789998 5543          245569999999821                       112233322221  1233


Q ss_pred             EEEEECCCCeEEEEEcccCCcEEEEEEcCCCEEEEEECCCeEEEEe--CCCcEEEEE----eCCCCCEE-EEEEeC-CCe
Q psy7057          61 AKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHS--EEGEFLKTL----TGHTDCVR-GLAVLN-DTD  132 (557)
Q Consensus        61 i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd--~~~~~~~~l----~~h~~~V~-~l~~~~-~~~  132 (557)
                      |.|.|+...+.+..+.. .+ +..+--.++..+.+-|.||.+.-..  ..|+...+.    ..-.+++. .-.+.. .+.
T Consensus       120 VtVVDl~~~kvv~ei~~-PG-C~~iyP~~~~~F~~lC~DGsl~~v~Ld~~Gk~~~~~t~~F~~~~dp~f~~~~~~~~~~~  197 (342)
T PF06433_consen  120 VTVVDLAAKKVVGEIDT-PG-CWLIYPSGNRGFSMLCGDGSLLTVTLDADGKEAQKSTKVFDPDDDPLFEHPAYSRDGGR  197 (342)
T ss_dssp             EEEEETTTTEEEEEEEG-TS-EEEEEEEETTEEEEEETTSCEEEEEETSTSSEEEEEEEESSTTTS-B-S--EEETTTTE
T ss_pred             EEEEECCCCceeeeecC-CC-EEEEEecCCCceEEEecCCceEEEEECCCCCEeEeeccccCCCCcccccccceECCCCe
Confidence            44455555555544431 11 1112112233688889999987765  456654322    11222222 223333 356


Q ss_pred             EEEEECCCeEEEEECCCCeE--EEEEeCC----------CCcEEEEEE--cCCEEEEE---eCCC-------eEEEEECC
Q psy7057         133 FVSCSNDASIRVWDSTTGKC--VHTMYGH----------PNFIYSVAA--HGDLITSG---GEDQ-------CVCVYQNK  188 (557)
Q Consensus       133 lvs~s~Dg~I~vwd~~~~~~--~~~~~~h----------~~~V~~l~~--~~~~l~s~---s~Dg-------~I~iwd~~  188 (557)
                      ++-.+..|.|+--|+.....  ...+.--          ++.-.-+++  ..+.|++-   +.++       .|-++|+.
T Consensus       198 ~~F~Sy~G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~  277 (342)
T PF06433_consen  198 LYFVSYEGNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLIAYHAASGRLYVLMHQGGEGSHKDPGTEVWVYDLK  277 (342)
T ss_dssp             EEEEBTTSEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-EEEETTTTEEEEEEEE--TT-TTS-EEEEEEEETT
T ss_pred             EEEEecCCEEEEEeccCCcccccCcccccCccccccCcCCcceeeeeeccccCeEEEEecCCCCCCccCCceEEEEEECC
Confidence            77788889999888765432  2222211          111122333  22232222   2222       36677877


Q ss_pred             CCceEeeC--CccEEEEEEcCCCc--EEEE-EcCCcEEEEecCCCCcc
Q psy7057         189 AQNSFMIP--AMSVWAVAILPNSD--IVTG-SSDGIVRVFSANPDRQA  231 (557)
Q Consensus       189 ~~~~~~~~--~~~v~~v~~~p~g~--l~sg-~~Dg~I~iwd~~~~~~~  231 (557)
                      +.+.+...  ...+.++.++.+.+  |++. ..++.|.+||..+++..
T Consensus       278 t~krv~Ri~l~~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~  325 (342)
T PF06433_consen  278 THKRVARIPLEHPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKLV  325 (342)
T ss_dssp             TTEEEEEEEEEEEESEEEEESSSS-EEEEEETTTTEEEEEETTT--EE
T ss_pred             CCeEEEEEeCCCccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEE
Confidence            77443221  34678999999887  4443 45899999999988654

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>KOG4499|consensus

Probab=93.30  E-value=7.1  Score=37.23  Aligned_cols=89  Identities=16%  Similarity=0.165  Sum_probs=59.9

Q ss_pred             EEEEEcCCC--EEEEEECCCeEEEEe--C-CC-----cEEEEEeC----CCCCEEEEEEeCCCe-EEEEECCCeEEEEEC
Q psy7057          83 WGVIQLANG--IIVTGCADKTIKLHS--E-EG-----EFLKTLTG----HTDCVRGLAVLNDTD-FVSCSNDASIRVWDS  147 (557)
Q Consensus        83 ~~l~~~~~~--~l~sgs~dg~I~vwd--~-~~-----~~~~~l~~----h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~  147 (557)
                      +.++|..+.  ...+-+.+-+|.-||  . +|     +.+..++.    ..-..-.+++..+|. ++++-+.++|...|.
T Consensus       161 Ngl~Wd~d~K~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~dp  240 (310)
T KOG4499|consen  161 NGLAWDSDAKKFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKVDP  240 (310)
T ss_pred             ccccccccCcEEEEEccCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEECC
Confidence            456777655  566677778888888  2 22     22333332    111223445555666 557777889999999


Q ss_pred             CCCeEEEEEeCCCCcEEEEEEcCC
Q psy7057         148 TTGKCVHTMYGHPNFIYSVAAHGD  171 (557)
Q Consensus       148 ~~~~~~~~~~~h~~~V~~l~~~~~  171 (557)
                      .+|+.+.+++-....|+|++|-|.
T Consensus       241 ~tGK~L~eiklPt~qitsccFgGk  264 (310)
T KOG4499|consen  241 TTGKILLEIKLPTPQITSCCFGGK  264 (310)
T ss_pred             CCCcEEEEEEcCCCceEEEEecCC
Confidence            999999999988999999999443

>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length

Probab=92.91  E-value=2.5  Score=46.58  Aligned_cols=104  Identities=14%  Similarity=0.165  Sum_probs=69.2

Q ss_pred             CEEEEEEeCCCeEEEEE-CCCeEEEEECCCCeEEEEEe-CCCCcEEEEEE----cCCEEEEEeCCCeEEEEECC------
Q psy7057         121 CVRGLAVLNDTDFVSCS-NDASIRVWDSTTGKCVHTMY-GHPNFIYSVAA----HGDLITSGGEDQCVCVYQNK------  188 (557)
Q Consensus       121 ~V~~l~~~~~~~lvs~s-~Dg~I~vwd~~~~~~~~~~~-~h~~~V~~l~~----~~~~l~s~s~Dg~I~iwd~~------  188 (557)
                      ...-+.-+.-++++... ...++.|||.+.+.....-. ...+.|.++.|    +++.+++.|-...|.++...      
T Consensus        31 ~~~li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~  110 (631)
T PF12234_consen   31 NPSLISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTN  110 (631)
T ss_pred             CcceEeecccCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhc
Confidence            34444444456665444 34569999998877544322 45788999999    67788888999999998621      


Q ss_pred             C-C-----ce--EeeCC-ccEEEEEEcCCCcEEEEEcCCcEEEEec
Q psy7057         189 A-Q-----NS--FMIPA-MSVWAVAILPNSDIVTGSSDGIVRVFSA  225 (557)
Q Consensus       189 ~-~-----~~--~~~~~-~~v~~v~~~p~g~l~sg~~Dg~I~iwd~  225 (557)
                      . .     +.  +..++ .+|.+.+|.++|.+++|+ .+.+.|++-
T Consensus       111 ~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~s-GNqlfv~dk  155 (631)
T PF12234_consen  111 KGPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGS-GNQLFVFDK  155 (631)
T ss_pred             CCcccceeEEEEeecCCCCCccceeEecCCeEEEEe-CCEEEEECC
Confidence            1 1     22  22233 578999999999866655 455778764

This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.

>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A

Probab=92.27  E-value=14  Score=37.21  Aligned_cols=146  Identities=9%  Similarity=0.072  Sum_probs=73.4

Q ss_pred             cCCcEEEEEEcCCCEEEEEECCCeE-EEEeCCCc-EEEEEeCCCCCEEEEEEeCCCeEEEEECCCeEEEEEC-CCCeEEE
Q psy7057          78 HEMAVWGVIQLANGIIVTGCADKTI-KLHSEEGE-FLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDS-TTGKCVH  154 (557)
Q Consensus        78 h~~~V~~l~~~~~~~l~sgs~dg~I-~vwd~~~~-~~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~-~~~~~~~  154 (557)
                      -...+..+..+++|.++..+..|.+ .-|+.-.. -...-+.....|.+|.|.|++.+......|.|+.=+. ...+.-.
T Consensus       143 ~~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~~~~Gg~~~~s~~~~~~~~w~  222 (302)
T PF14870_consen  143 TSGSINDITRSSDGRYVAVSSRGNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNLWMLARGGQIQFSDDPDDGETWS  222 (302)
T ss_dssp             ----EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-EEEEETTTEEEEEE-TTEEEEE-
T ss_pred             CcceeEeEEECCCCcEEEEECcccEEEEecCCCccceEEccCccceehhceecCCCCEEEEeCCcEEEEccCCCCccccc
Confidence            4567888888899955555566655 46763222 2333334567899999999988776778899988872 2222111


Q ss_pred             E--Ee--CCCCcEEEEEE-cCCEEEEEeCCCeEEEE-ECCCC-ceEe---eCCccEEEEEEcCCCcEEEEEcCCcEEEE
Q psy7057         155 T--MY--GHPNFIYSVAA-HGDLITSGGEDQCVCVY-QNKAQ-NSFM---IPAMSVWAVAILPNSDIVTGSSDGIVRVF  223 (557)
Q Consensus       155 ~--~~--~h~~~V~~l~~-~~~~l~s~s~Dg~I~iw-d~~~~-~~~~---~~~~~v~~v~~~p~g~l~sg~~Dg~I~iw  223 (557)
                      .  ..  ...-.+..+++ .++.+.+++..|.+.+= |-... +...   ....-++.+.|.+..+-++-+.+|.|.-|
T Consensus       223 ~~~~~~~~~~~~~ld~a~~~~~~~wa~gg~G~l~~S~DgGktW~~~~~~~~~~~n~~~i~f~~~~~gf~lG~~G~ll~~  301 (302)
T PF14870_consen  223 EPIIPIKTNGYGILDLAYRPPNEIWAVGGSGTLLVSTDGGKTWQKDRVGENVPSNLYRIVFVNPDKGFVLGQDGVLLRY  301 (302)
T ss_dssp             --B-TTSS--S-EEEEEESSSS-EEEEESTT-EEEESSTTSS-EE-GGGTTSSS---EEEEEETTEEEEE-STTEEEEE
T ss_pred             cccCCcccCceeeEEEEecCCCCEEEEeCCccEEEeCCCCccceECccccCCCCceEEEEEcCCCceEEECCCcEEEEe
Confidence            1  11  12234788899 44555556666655443 22222 2222   12345788888877775666788877655

>KOG4499|consensus

Probab=92.03  E-value=1.3  Score=41.93  Aligned_cols=76  Identities=9%  Similarity=-0.021  Sum_probs=60.3

Q ss_pred             EEEEEcCCCc--EEEEECCCcEEEEcCC--C-------------------------CCCCCCCCEEEEEECCCeEEEEEC
Q psy7057          16 RSLSVTPDGC--ILSASRDKSAKLWKPN--D-------------------------LSPGAKVNTLLSASWDMTAKLWCL   66 (557)
Q Consensus        16 ~~l~~spdg~--l~sgs~Dg~V~iWd~~--~-------------------------~~~~~~~~~l~sgs~Dg~i~iwd~   66 (557)
                      +.++|+.+.+  .++-+.+-+|.-||.+  +                         ++.+..+++.+++-..++|...|+
T Consensus       161 Ngl~Wd~d~K~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~dp  240 (310)
T KOG4499|consen  161 NGLAWDSDAKKFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKVDP  240 (310)
T ss_pred             ccccccccCcEEEEEccCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEECC
Confidence            3567777766  4577888888888732  2                         444556788888888999999999


Q ss_pred             CCCeEEEEEcccCCcEEEEEEcCCC
Q psy7057          67 ESQQCKLTIRQHEMAVWGVIQLANG   91 (557)
Q Consensus        67 ~~~~~~~~l~~h~~~V~~l~~~~~~   91 (557)
                      .+|+.+..+.-....|+|++|-..+
T Consensus       241 ~tGK~L~eiklPt~qitsccFgGkn  265 (310)
T KOG4499|consen  241 TTGKILLEIKLPTPQITSCCFGGKN  265 (310)
T ss_pred             CCCcEEEEEEcCCCceEEEEecCCC
Confidence            9999999998889999999998764

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=91.98  E-value=16  Score=37.20  Aligned_cols=228  Identities=11%  Similarity=0.090  Sum_probs=107.8

Q ss_pred             CCCCCCCEEEEEE----------CCCeEEEEECCCCeEEEEEcccCC-cEEE------EEEcCCC---EEEEEECCCeEE
Q psy7057          44 SPGAKVNTLLSAS----------WDMTAKLWCLESQQCKLTIRQHEM-AVWG------VIQLANG---IIVTGCADKTIK  103 (557)
Q Consensus        44 ~~~~~~~~l~sgs----------~Dg~i~iwd~~~~~~~~~l~~h~~-~V~~------l~~~~~~---~l~sgs~dg~I~  103 (557)
                      ..+++++.+++++          +.-.|.+||..+-.+...+.-... ...+      +.++.++   ++.-.+--..|.
T Consensus        42 ~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~~~~~~~~~~ls~dgk~~~V~N~TPa~SVt  121 (342)
T PF06433_consen   42 ALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQVVPYKNMFALSADGKFLYVQNFTPATSVT  121 (342)
T ss_dssp             EE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--BS--GGGEEE-TTSSEEEEEEESSSEEEE
T ss_pred             eECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchheecccccceEEccCCcEEEEEccCCCCeEE
Confidence            3456677777644          344589999999887765533221 2211      2333333   111222233344


Q ss_pred             EEeCCCcE-EEEEeCCCCCEEEEEEeCCCeEEEEECCCeEEEEECC-CCeEEEEEe----CCCCcEE-EEEE--cCCEEE
Q psy7057         104 LHSEEGEF-LKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDST-TGKCVHTMY----GHPNFIY-SVAA--HGDLIT  174 (557)
Q Consensus       104 vwd~~~~~-~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~-~~~~~~~~~----~h~~~V~-~l~~--~~~~l~  174 (557)
                      |-|+..+. +..+. -.++ ..+--.++..|.+-|.||++.-..+. .|+...+..    .-..++. .-.+  .+..++
T Consensus       122 VVDl~~~kvv~ei~-~PGC-~~iyP~~~~~F~~lC~DGsl~~v~Ld~~Gk~~~~~t~~F~~~~dp~f~~~~~~~~~~~~~  199 (342)
T PF06433_consen  122 VVDLAAKKVVGEID-TPGC-WLIYPSGNRGFSMLCGDGSLLTVTLDADGKEAQKSTKVFDPDDDPLFEHPAYSRDGGRLY  199 (342)
T ss_dssp             EEETTTTEEEEEEE-GTSE-EEEEEEETTEEEEEETTSCEEEEEETSTSSEEEEEEEESSTTTS-B-S--EEETTTTEEE
T ss_pred             EEECCCCceeeeec-CCCE-EEEEecCCCceEEEecCCceEEEEECCCCCEeEeeccccCCCCcccccccceECCCCeEE
Confidence            44433332 22222 2222 22222333558899999999988876 566543321    1122222 1122  334455


Q ss_pred             EEeCCCeEEEEECCCCc-----eEeeCC----------ccEEEEEEcCCC-cEEE---EEc-----CCc--EEEEecCCC
Q psy7057         175 SGGEDQCVCVYQNKAQN-----SFMIPA----------MSVWAVAILPNS-DIVT---GSS-----DGI--VRVFSANPD  228 (557)
Q Consensus       175 s~s~Dg~I~iwd~~~~~-----~~~~~~----------~~v~~v~~~p~g-~l~s---g~~-----Dg~--I~iwd~~~~  228 (557)
                      --+-+|.|+--|+....     .+....          +.-.-+++++.. +|.+   -+.     |+.  |-++|+.+.
T Consensus       200 F~Sy~G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~t~  279 (342)
T PF06433_consen  200 FVSYEGNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLIAYHAASGRLYVLMHQGGEGSHKDPGTEVWVYDLKTH  279 (342)
T ss_dssp             EEBTTSEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-EEEETTTTEEEEEEEE--TT-TTS-EEEEEEEETTTT
T ss_pred             EEecCCEEEEEeccCCcccccCcccccCccccccCcCCcceeeeeeccccCeEEEEecCCCCCCccCCceEEEEEECCCC
Confidence            56777888777754431     111111          011235565543 3222   111     222  455566665


Q ss_pred             CcchhHHHhcccceeEEEeccCCCceeEEEE-eCCCcEEEEecCCChhh
Q psy7057         229 RQAEDAVQAQYAEEVKKLKSANEQEIGGVKV-SDDGIVRVFSANPDRQA  276 (557)
Q Consensus       229 ~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~-s~DG~IrvW~~~~~~~~  276 (557)
                      +......+.   ..+.++....+....+++. ..++.+.|||..+++..
T Consensus       280 krv~Ri~l~---~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~  325 (342)
T PF06433_consen  280 KRVARIPLE---HPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKLV  325 (342)
T ss_dssp             EEEEEEEEE---EEESEEEEESSSS-EEEEEETTTTEEEEEETTT--EE
T ss_pred             eEEEEEeCC---CccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEE
Confidence            544333322   3354566555655556555 46899999998887544

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs

Probab=91.88  E-value=8.4  Score=43.59  Aligned_cols=148  Identities=9%  Similarity=0.082  Sum_probs=72.0

Q ss_pred             CCCCCEEEEEEeCC----CeEEEEECCCeEEEEECCCCe-EEEEEe--CCCCcEEEEEEcCCEEEEEeCCCeEEEEECCC
Q psy7057         117 GHTDCVRGLAVLND----TDFVSCSNDASIRVWDSTTGK-CVHTMY--GHPNFIYSVAAHGDLITSGGEDQCVCVYQNKA  189 (557)
Q Consensus       117 ~h~~~V~~l~~~~~----~~lvs~s~Dg~I~vwd~~~~~-~~~~~~--~h~~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~  189 (557)
                      .+...|..+.|+|.    ..|+.-..|+++|+||+.... +..++.  ..... ..+.-.+....++-.+ +..=||...
T Consensus       144 ~~~~~i~qv~WhP~s~~~~~l~vLtsdn~lR~y~~~~~~~p~~v~~~~~~~~~-~~~~~~~~~~~~slge-~AV~FDfgP  221 (717)
T PF10168_consen  144 NSSLEIKQVRWHPWSESDSHLVVLTSDNTLRLYDISDPQHPWQVLSLSPGEKS-SSLSSRGRSFLASLGE-TAVDFDFGP  221 (717)
T ss_pred             CCCceEEEEEEcCCCCCCCeEEEEecCCEEEEEecCCCCCCeEEEEcccCccc-ccccCCCccccccchh-eeeeccccc
Confidence            34567999999987    348888999999999986532 223222  11000 0000011111111111 222233222


Q ss_pred             C----ceEeeCC---c-cEEEE-EEcCCCc--EEEEEc-CCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEE
Q psy7057         190 Q----NSFMIPA---M-SVWAV-AILPNSD--IVTGSS-DGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGV  257 (557)
Q Consensus       190 ~----~~~~~~~---~-~v~~v-~~~p~g~--l~sg~~-Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~v  257 (557)
                      .    ..+....   . ..+.+ ....+|.  ++.++- +.....+.+...-.........+....+++.+.+..+..+|
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~p~~vL~~ng~v~~~~~~l~~~~~~~~~~~gpl~~~p~~~dnyg~d~c~i~~l~~~p~~~v  301 (717)
T PF10168_consen  222 LDTSPKTLTGQKSKQEKIEWPIFVLRENGDVYLLYTSLQDENSNLPKLQGPLPMQPPADDNYGLDACSILCLPSLPPVLV  301 (717)
T ss_pred             ccccccccccccCCCCceeccEEEEecCCCEEEEEEecccCccccceecCceecCCCCcccCCCceeeEEEecCCCCEEE
Confidence            1    1111111   0 11212 2344555  333333 34445555443322222333445555667777777778889


Q ss_pred             EEeCCCcEE
Q psy7057         258 KVSDDGIVR  266 (557)
Q Consensus       258 s~s~DG~Ir  266 (557)
                      .+..+|++.
T Consensus       302 ia~~~G~l~  310 (717)
T PF10168_consen  302 IATSNGKLY  310 (717)
T ss_pred             EEecCCeEE
Confidence            999999887

It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].

>PF15390 DUF4613: Domain of unknown function (DUF4613)

Probab=91.80  E-value=5.5  Score=42.88  Aligned_cols=126  Identities=13%  Similarity=0.115  Sum_probs=79.7

Q ss_pred             CcccEEEEEEcCCC-----cEEEEECCCcEEEEcCCC--------------------------CCCCCCCCEEEEEECCC
Q psy7057          11 HSMDVRSLSVTPDG-----CILSASRDKSAKLWKPND--------------------------LSPGAKVNTLLSASWDM   59 (557)
Q Consensus        11 H~~~V~~l~~spdg-----~l~sgs~Dg~V~iWd~~~--------------------------~~~~~~~~~l~sgs~Dg   59 (557)
                      .-..|..++|.|-+     .|++......|.+|.+..                          +-|+|....|+.-....
T Consensus        55 qFEhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~d  134 (671)
T PF15390_consen   55 QFEHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTARD  134 (671)
T ss_pred             ccceeeeeeecCcccCCCCceEEEeccceEEEEEeccCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEecCc
Confidence            33568899999964     288999999999998753                          55677777777666555


Q ss_pred             eEEEEECCC--CeEEEEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEeCCCcEEE-----EEeCCCCCEEEEEEeCC
Q psy7057          60 TAKLWCLES--QQCKLTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHSEEGEFLK-----TLTGHTDCVRGLAVLND  130 (557)
Q Consensus        60 ~i~iwd~~~--~~~~~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~~~~~~~-----~l~~h~~~V~~l~~~~~  130 (557)
                      .-.++++..  .+....+ ...+.|.|.+|.+||  +++..+..=.-++||...+.+.     ....-.+.|++|.-.-+
T Consensus       135 vSV~~sV~~d~srVkaDi-~~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~~qKtL~~CsfcPVFdv~~~Icsi~AT~d  213 (671)
T PF15390_consen  135 VSVLPSVHCDSSRVKADI-KTSGLIHCACWTKDGQRLVVAVGSSLHSYIWDSAQKTLHRCSFCPVFDVGGYICSIEATVD  213 (671)
T ss_pred             eeEeeeeeeCCceEEEec-cCCceEEEEEecCcCCEEEEEeCCeEEEEEecCchhhhhhCCcceeecCCCceEEEEEecc
Confidence            444555432  2333344 356789999999999  4444444445778994332211     12233456777766555


Q ss_pred             CeEEEEE
Q psy7057         131 TDFVSCS  137 (557)
Q Consensus       131 ~~lvs~s  137 (557)
                      .+++.+.
T Consensus       214 sqVAvaT  220 (671)
T PF15390_consen  214 SQVAVAT  220 (671)
T ss_pred             ceEEEEe
Confidence            5555443

>PLN00033 photosystem II stability/assembly factor; Provisional

Probab=91.75  E-value=18  Score=38.04  Aligned_cols=137  Identities=11%  Similarity=0.027  Sum_probs=80.6

Q ss_pred             EEEcCCCEEEEEECCCeEE-EEeCCCcE--EEEEeCCCCCEEEEEEeCCCeEEEEECCCeEEEEECCCCe-----EEEEE
Q psy7057          85 VIQLANGIIVTGCADKTIK-LHSEEGEF--LKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGK-----CVHTM  156 (557)
Q Consensus        85 l~~~~~~~l~sgs~dg~I~-vwd~~~~~--~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~-----~~~~~  156 (557)
                      +..++++.++..+..|.+. -|| .+..  ...-......+.++.+.+++.++.++.+|.+..-+ ..++     .....
T Consensus       244 v~~~~dG~~~~vg~~G~~~~s~d-~G~~~W~~~~~~~~~~l~~v~~~~dg~l~l~g~~G~l~~S~-d~G~~~~~~~f~~~  321 (398)
T PLN00033        244 VNRSPDGDYVAVSSRGNFYLTWE-PGQPYWQPHNRASARRIQNMGWRADGGLWLLTRGGGLYVSK-GTGLTEEDFDFEEA  321 (398)
T ss_pred             EEEcCCCCEEEEECCccEEEecC-CCCcceEEecCCCccceeeeeEcCCCCEEEEeCCceEEEec-CCCCcccccceeec
Confidence            4445666444444444433 343 2221  22222334568899999998888777888765433 3443     22222


Q ss_pred             eC--CCCcEEEEEE-cCCEEEEEeCCCeEEEEECC-CC-ceEe---eCCccEEEEEEcCCCcEEEEEcCCcEEEE
Q psy7057         157 YG--HPNFIYSVAA-HGDLITSGGEDQCVCVYQNK-AQ-NSFM---IPAMSVWAVAILPNSDIVTGSSDGIVRVF  223 (557)
Q Consensus       157 ~~--h~~~V~~l~~-~~~~l~s~s~Dg~I~iwd~~-~~-~~~~---~~~~~v~~v~~~p~g~l~sg~~Dg~I~iw  223 (557)
                      ..  ....+.++.+ +...++.++..|.+...... .. +...   ......+.+.|.++++..+.+.+|.|.-|
T Consensus       322 ~~~~~~~~l~~v~~~~d~~~~a~G~~G~v~~s~D~G~tW~~~~~~~~~~~~ly~v~f~~~~~g~~~G~~G~il~~  396 (398)
T PLN00033        322 DIKSRGFGILDVGYRSKKEAWAAGGSGILLRSTDGGKSWKRDKGADNIAANLYSVKFFDDKKGFVLGNDGVLLRY  396 (398)
T ss_pred             ccCCCCcceEEEEEcCCCcEEEEECCCcEEEeCCCCcceeEccccCCCCcceeEEEEcCCCceEEEeCCcEEEEe
Confidence            21  1235788888 55567888888877776522 22 2222   22346889999888887788888887655

>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family

Probab=91.54  E-value=21  Score=40.86  Aligned_cols=108  Identities=16%  Similarity=0.131  Sum_probs=71.4

Q ss_pred             CCEEEEEECCCeEEEEECCCCeEEEEEcccCCc--------EEEEEEcC-----------------CCEEEEEECCCeEE
Q psy7057          49 VNTLLSASWDMTAKLWCLESQQCKLTIRQHEMA--------VWGVIQLA-----------------NGIIVTGCADKTIK  103 (557)
Q Consensus        49 ~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~--------V~~l~~~~-----------------~~~l~sgs~dg~I~  103 (557)
                      ++.++.++.++.|.-.|..+|+.+.++......        ...+.+..                 ++.++.++.|+.+.
T Consensus       194 gg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~Li  273 (764)
T TIGR03074       194 GDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDARLI  273 (764)
T ss_pred             CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCCeEE
Confidence            577888888999999999999988877543211        11122211                 23788899999999


Q ss_pred             EEe-CCCcEEEEEeCCCCCE----------------EEEEEeCCCeEEEEEC----------CCeEEEEECCCCeEEEEE
Q psy7057         104 LHS-EEGEFLKTLTGHTDCV----------------RGLAVLNDTDFVSCSN----------DASIRVWDSTTGKCVHTM  156 (557)
Q Consensus       104 vwd-~~~~~~~~l~~h~~~V----------------~~l~~~~~~~lvs~s~----------Dg~I~vwd~~~~~~~~~~  156 (557)
                      -.| .+|+.+..+.. .+.|                ++--..-++.++.|+.          +|.|+-+|.++|+.+-.+
T Consensus       274 ALDA~TGk~~W~fg~-~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~A~Da~TGkl~W~~  352 (764)
T TIGR03074       274 ALDADTGKLCEDFGN-NGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIRAFDVNTGALVWAW  352 (764)
T ss_pred             EEECCCCCEEEEecC-CCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEEEEECCCCcEeeEE
Confidence            888 67887766532 1111                1111111356666643          688999999999998877


Q ss_pred             e
Q psy7057         157 Y  157 (557)
Q Consensus       157 ~  157 (557)
                      .
T Consensus       353 ~  353 (764)
T TIGR03074       353 D  353 (764)
T ss_pred             e
Confidence            5

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=91.47  E-value=7.6  Score=41.14  Aligned_cols=139  Identities=17%  Similarity=0.039  Sum_probs=81.8

Q ss_pred             cccEEEEEEcCCCc-EEEE--ECC--CcEEEEcCCC---------------CCCCCCCCEEEE-EECCCe--EEEEECCC
Q psy7057          12 SMDVRSLSVTPDGC-ILSA--SRD--KSAKLWKPND---------------LSPGAKVNTLLS-ASWDMT--AKLWCLES   68 (557)
Q Consensus        12 ~~~V~~l~~spdg~-l~sg--s~D--g~V~iWd~~~---------------~~~~~~~~~l~s-gs~Dg~--i~iwd~~~   68 (557)
                      ...+..-+|+|++. ++..  ...  ..+.+++++.               ..++|++..|+- ...|+.  |.+.|+.+
T Consensus       192 ~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~~~g~~~~P~fspDG~~l~f~~~rdg~~~iy~~dl~~  271 (425)
T COG0823         192 GSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILNFNGNNGAPAFSPDGSKLAFSSSRDGSPDIYLMDLDG  271 (425)
T ss_pred             CcceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeeccCCccCCccCCCCCCEEEEEECCCCCccEEEEcCCC
Confidence            34566678999987 4422  222  4588888876               567777877654 456666  45556666


Q ss_pred             CeEEEEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEE--eCCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEE-CCCe-
Q psy7057          69 QQCKLTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLH--SEEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCS-NDAS-  141 (557)
Q Consensus        69 ~~~~~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vw--d~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s-~Dg~-  141 (557)
                      +. ...+..-.+.-+.=.|+|+|  .+.+.+..|.-.||  +.++.....+......-..-.++|+|. |+..+ .+|. 
T Consensus       272 ~~-~~~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~~riT~~~~~~~~p~~SpdG~~i~~~~~~~g~~  350 (425)
T COG0823         272 KN-LPRLTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQVTRLTFSGGGNSNPVWSPDGDKIVFESSSGGQW  350 (425)
T ss_pred             Cc-ceecccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCceeEeeccCCCCcCccCCCCCCEEEEEeccCCce
Confidence            55 33344333333356788999  55566666665554  466665555544433333667899987 44333 2344 


Q ss_pred             -EEEEECCCCe
Q psy7057         142 -IRVWDSTTGK  151 (557)
Q Consensus       142 -I~vwd~~~~~  151 (557)
                       |.+.|+.++.
T Consensus       351 ~i~~~~~~~~~  361 (425)
T COG0823         351 DIDKNDLASGG  361 (425)
T ss_pred             eeEEeccCCCC
Confidence             5555655444

>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase

Probab=91.35  E-value=16  Score=35.94  Aligned_cols=197  Identities=15%  Similarity=0.081  Sum_probs=104.6

Q ss_pred             cEEEEECCCcEEEEcCCC---------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEE--------------E
Q psy7057          25 CILSASRDKSAKLWKPND---------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLT--------------I   75 (557)
Q Consensus        25 ~l~sgs~Dg~V~iWd~~~---------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~--------------l   75 (557)
                      .|+.|..+| +.+++...               +..-+.-+.+++-+ |+.+.++++..-.....              .
T Consensus         9 ~L~vGt~~G-l~~~~~~~~~~~~~i~~~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~~~~~~~~~~~~   86 (275)
T PF00780_consen    9 RLLVGTEDG-LYVYDLSDPSKPTRILKLSSITQLSVLPELNLLLVLS-DGQLYVYDLDSLEPVSTSAPLAFPKSRSLPTK   86 (275)
T ss_pred             EEEEEECCC-EEEEEecCCccceeEeecceEEEEEEecccCEEEEEc-CCccEEEEchhhcccccccccccccccccccc
Confidence            488888888 88888732               33334445555544 59999999876433321              1


Q ss_pred             cccCCcEEEEE--EcCCC-EEEEEECCCeEEEEeCC-----C-cEEEEEeCCCCCEEEEEEeCCCeEEEEECCCeEEEEE
Q psy7057          76 RQHEMAVWGVI--QLANG-IIVTGCADKTIKLHSEE-----G-EFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWD  146 (557)
Q Consensus        76 ~~h~~~V~~l~--~~~~~-~l~sgs~dg~I~vwd~~-----~-~~~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd  146 (557)
                      ......+...+  -...+ ..+.....++|.+|...     . ...+.+. -.+.+.+++|.+ +.++.|.. ....+.|
T Consensus        87 ~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~~-lp~~~~~i~~~~-~~i~v~~~-~~f~~id  163 (275)
T PF00780_consen   87 LPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLKEIS-LPDPPSSIAFLG-NKICVGTS-KGFYLID  163 (275)
T ss_pred             ccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCcccccceeEEEE-cCCCcEEEEEeC-CEEEEEeC-CceEEEe
Confidence            11223344444  11223 44444455588887621     1 2344444 447889999983 44555554 4578889


Q ss_pred             CCCCeEEEEEeCC------------CCcEEEEEEc-CCEEEEEeCCCeEEEEECCC-C---ceEeeCCccEEEEEEcCCC
Q psy7057         147 STTGKCVHTMYGH------------PNFIYSVAAH-GDLITSGGEDQCVCVYQNKA-Q---NSFMIPAMSVWAVAILPNS  209 (557)
Q Consensus       147 ~~~~~~~~~~~~h------------~~~V~~l~~~-~~~l~s~s~Dg~I~iwd~~~-~---~~~~~~~~~v~~v~~~p~g  209 (557)
                      +.++.....+...            ..++..+... +.+|++ .. ..-.+.+... .   ..+.- ...+.++++..  
T Consensus       164 l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Ll~-~~-~~g~fv~~~G~~~r~~~i~W-~~~p~~~~~~~--  238 (275)
T PF00780_consen  164 LNTGSPSELLDPSDSSSSFKSRNSSSKPLGIFQLSDNEFLLC-YD-NIGVFVNKNGEPSRKSTIQW-SSAPQSVAYSS--  238 (275)
T ss_pred             cCCCCceEEeCccCCcchhhhcccCCCceEEEEeCCceEEEE-ec-ceEEEEcCCCCcCcccEEEc-CCchhEEEEEC--
Confidence            8876654433211            1234444443 445544 32 2333333221 1   22222 22445555532  


Q ss_pred             cEEEEEcCCcEEEEecCCCCcc
Q psy7057         210 DIVTGSSDGIVRVFSANPDRQA  231 (557)
Q Consensus       210 ~l~sg~~Dg~I~iwd~~~~~~~  231 (557)
                      .++.+-.++.|.||++.+++..
T Consensus       239 pyli~~~~~~iEV~~~~~~~lv  260 (275)
T PF00780_consen  239 PYLIAFSSNSIEVRSLETGELV  260 (275)
T ss_pred             CEEEEECCCEEEEEECcCCcEE
Confidence            2555556677999999988653

These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity

>PRK13616 lipoprotein LpqB; Provisional

Probab=91.31  E-value=12  Score=41.45  Aligned_cols=175  Identities=11%  Similarity=0.073  Sum_probs=89.2

Q ss_pred             CCCCCCCCEEEEEE------CCCeEEEEECC-CCeEEEEEcccCCcEEEEEEcCCC-EEEEEECC-CeEEEEeCCC-cEE
Q psy7057          43 LSPGAKVNTLLSAS------WDMTAKLWCLE-SQQCKLTIRQHEMAVWGVIQLANG-IIVTGCAD-KTIKLHSEEG-EFL  112 (557)
Q Consensus        43 ~~~~~~~~~l~sgs------~Dg~i~iwd~~-~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~d-g~I~vwd~~~-~~~  112 (557)
                      ...+++++.++...      .|..-.||-.. .+.....+.+  ...++-.|+|+| .+++.+.. ..+++.+..+ ..+
T Consensus       355 paiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg~~~~lt~g--~~~t~PsWspDG~~lw~v~dg~~~~~v~~~~~~gql  432 (591)
T PRK13616        355 AALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGGVAVQVLEG--HSLTRPSWSLDADAVWVVVDGNTVVRVIRDPATGQL  432 (591)
T ss_pred             ceECCCCCEEEEEEeecCCCCCcceEEEEEeCCCcceeeecC--CCCCCceECCCCCceEEEecCcceEEEeccCCCceE
Confidence            45677788776655      24444444332 2222222232  236778899986 66665433 2233333111 111


Q ss_pred             EEE--e------CCCCCEEEEEEeCCCe-EEEEECCCeEEE---EECCCCeE-E---EEEe-CCCCcEEEEEE-cCCEEE
Q psy7057         113 KTL--T------GHTDCVRGLAVLNDTD-FVSCSNDASIRV---WDSTTGKC-V---HTMY-GHPNFIYSVAA-HGDLIT  174 (557)
Q Consensus       113 ~~l--~------~h~~~V~~l~~~~~~~-lvs~s~Dg~I~v---wd~~~~~~-~---~~~~-~h~~~V~~l~~-~~~~l~  174 (557)
                      ..+  .      .....|..+.|+|+|. ++... ++.|.+   -....|.. +   ..+. +-...+.++.| .+..|+
T Consensus       433 ~~~~vd~ge~~~~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~G~~~l~~~~~l~~~l~~~~~~l~W~~~~~L~  511 (591)
T PRK13616        433 ARTPVDASAVASRVPGPISELQLSRDGVRAAMII-GGKVYLAVVEQTEDGQYALTNPREVGPGLGDTAVSLDWRTGDSLV  511 (591)
T ss_pred             EEEeccCchhhhccCCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCCCceeecccEEeecccCCccccceEecCCEEE
Confidence            111  1      2345799999999987 33322 567776   44334431 1   1122 22344678889 444466


Q ss_pred             EEeCCCeEEEEE--CCCC-ceE-ee--CCccEEEEEEcCCCcEEEEEcCCcEE
Q psy7057         175 SGGEDQCVCVYQ--NKAQ-NSF-MI--PAMSVWAVAILPNSDIVTGSSDGIVR  221 (557)
Q Consensus       175 s~s~Dg~I~iwd--~~~~-~~~-~~--~~~~v~~v~~~p~g~l~sg~~Dg~I~  221 (557)
                      ++..++...+|.  +... ... ..  ....+.+|+-.+. .++....++.+.
T Consensus       512 V~~~~~~~~v~~v~vDG~~~~~~~~~n~~~~v~~vaa~~~-~iyv~~~~g~~~  563 (591)
T PRK13616        512 VGRSDPEHPVWYVNLDGSNSDALPSRNLSAPVVAVAASPS-TVYVTDARAVLQ  563 (591)
T ss_pred             EEecCCCCceEEEecCCccccccCCCCccCceEEEecCCc-eEEEEcCCceEE
Confidence            666655555565  3222 222 22  2346667776653 466666666433

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=90.70  E-value=0.73  Score=32.26  Aligned_cols=29  Identities=17%  Similarity=0.186  Sum_probs=22.6

Q ss_pred             cccEEEEEEcCCCc-EEEEECCCcEEEEcC
Q psy7057          12 SMDVRSLSVTPDGC-ILSASRDKSAKLWKP   40 (557)
Q Consensus        12 ~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~   40 (557)
                      ...|.+++|+|... ||.++.+|.|.++.+
T Consensus        11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl   40 (47)
T PF12894_consen   11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRL   40 (47)
T ss_pred             CCcEEEEEECCCCCEEEEEECCCeEEEEEC
Confidence            45799999999876 667777777777765

>PHA02713 hypothetical protein; Provisional

Probab=90.66  E-value=7.2  Score=42.98  Aligned_cols=88  Identities=7%  Similarity=0.132  Sum_probs=44.2

Q ss_pred             eEEEEECCCCe--EEEEEeCCCCcEEEEEEcCCEEEEEeCC------CeEEEEECCC-C--ceEeeCCcc--EEEEEEcC
Q psy7057         141 SIRVWDSTTGK--CVHTMYGHPNFIYSVAAHGDLITSGGED------QCVCVYQNKA-Q--NSFMIPAMS--VWAVAILP  207 (557)
Q Consensus       141 ~I~vwd~~~~~--~~~~~~~h~~~V~~l~~~~~~l~s~s~D------g~I~iwd~~~-~--~~~~~~~~~--v~~v~~~p  207 (557)
                      ++..||..+.+  .+..+.........+..++.+.+.|+.+      ..+..||..+ .  ..+.....+  ...++.. 
T Consensus       433 ~ve~YDP~td~W~~v~~m~~~r~~~~~~~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~~~~~~~~-  511 (557)
T PHA02713        433 KVIRYDTVNNIWETLPNFWTGTIRPGVVSHKDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLSALHTILH-  511 (557)
T ss_pred             eEEEECCCCCeEeecCCCCcccccCcEEEECCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCcccccceeEEE-
Confidence            46678876543  2222221111222233477777777654      2467888765 3  222111111  1122222 


Q ss_pred             CCc-EEEEEcCC--cEEEEecCCCC
Q psy7057         208 NSD-IVTGSSDG--IVRVFSANPDR  229 (557)
Q Consensus       208 ~g~-l~sg~~Dg--~I~iwd~~~~~  229 (557)
                      +++ +++||.++  ++..||..+.+
T Consensus       512 ~~~iyv~Gg~~~~~~~e~yd~~~~~  536 (557)
T PHA02713        512 DNTIMMLHCYESYMLQDTFNVYTYE  536 (557)
T ss_pred             CCEEEEEeeecceeehhhcCccccc
Confidence            556 77888888  56667666554

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=90.56  E-value=24  Score=36.79  Aligned_cols=191  Identities=18%  Similarity=0.191  Sum_probs=111.6

Q ss_pred             CcEEEEEEcCCC--EEEEEECCCeEEEEeCCC-cEEEEEeCCCCCEEEEEEeCCCe--EEEEE--CCCeEEEEECCCCeE
Q psy7057          80 MAVWGVIQLANG--IIVTGCADKTIKLHSEEG-EFLKTLTGHTDCVRGLAVLNDTD--FVSCS--NDASIRVWDSTTGKC  152 (557)
Q Consensus        80 ~~V~~l~~~~~~--~l~sgs~dg~I~vwd~~~-~~~~~l~~h~~~V~~l~~~~~~~--lvs~s--~Dg~I~vwd~~~~~~  152 (557)
                      .....++.++.+  .+++...++.|.+.|... ....... -......+++.+++.  +++-+  .++++.+.|..+.+.
T Consensus        74 ~~p~~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~~~~~~-vG~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~  152 (381)
T COG3391          74 VYPAGVAVNPAGNKVYVTTGDSNTVSVIDTATNTVLGSIP-VGLGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKV  152 (381)
T ss_pred             ccccceeeCCCCCeEEEecCCCCeEEEEcCcccceeeEee-eccCCceEEECCCCCEEEEEecccCCceEEEEeCCCCeE
Confidence            334566777766  455555678899998433 3333322 222677889998875  33444  478999999888888


Q ss_pred             EEEEeCCCCcEEEEEE--cCCEEE-EEeCCCeEEEEECCCCceEe-------eCCccEEEEEEcCCCc-E-EEEEcC--C
Q psy7057         153 VHTMYGHPNFIYSVAA--HGDLIT-SGGEDQCVCVYQNKAQNSFM-------IPAMSVWAVAILPNSD-I-VTGSSD--G  218 (557)
Q Consensus       153 ~~~~~~h~~~V~~l~~--~~~~l~-s~s~Dg~I~iwd~~~~~~~~-------~~~~~v~~v~~~p~g~-l-~sg~~D--g  218 (557)
                      +.+...-..+ ..+++  ++..++ +-..++.|.+.|........       ........+.+.|++. + ++...+  +
T Consensus       153 ~~~~~vG~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~  231 (381)
T COG3391         153 TATIPVGNTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVRGSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSGSN  231 (381)
T ss_pred             EEEEecCCCc-ceEEECCCCCeEEEEecCCCeEEEEeCCCcceeccccccccccCCCCceEEECCCCCEEEEEeccCCCc
Confidence            8775433233 56666  677544 44588999999966553332       2223457889999998 3 333333  5


Q ss_pred             cEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCC
Q psy7057         219 IVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPD  273 (557)
Q Consensus       219 ~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~  273 (557)
                      .+.+.+..+............. ....+...+......+.-+..+.+.+-+....
T Consensus       232 ~v~~id~~~~~v~~~~~~~~~~-~~~~v~~~p~g~~~yv~~~~~~~V~vid~~~~  285 (381)
T COG3391         232 NVLKIDTATGNVTATDLPVGSG-APRGVAVDPAGKAAYVANSQGGTVSVIDGATD  285 (381)
T ss_pred             eEEEEeCCCceEEEeccccccC-CCCceeECCCCCEEEEEecCCCeEEEEeCCCC
Confidence            7888887766544321111111 12223334444443444444566666665554

>KOG1897|consensus

Probab=90.48  E-value=38  Score=38.92  Aligned_cols=263  Identities=13%  Similarity=0.111  Sum_probs=135.3

Q ss_pred             EEEEeccCcccEEEEEEcCCCcEEEEECCCcEEEEcCCC-------------------------CCCC-CCCCEEEEEE-
Q psy7057           4 LSTALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPND-------------------------LSPG-AKVNTLLSAS-   56 (557)
Q Consensus         4 l~~~l~gH~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~-------------------------~~~~-~~~~~l~sgs-   56 (557)
                      +....-|..+-..|+...++|-|++||.-|.=.+-.+.+                         +... .....+++|+ 
T Consensus       298 lkve~lge~siassi~~L~ng~lFvGS~~gdSqLi~L~~e~d~gsy~~ilet~~NLgPI~Dm~Vvd~d~q~q~qivtCsG  377 (1096)
T KOG1897|consen  298 LKVEYLGETSIASSINYLDNGVLFVGSRFGDSQLIKLNTEPDVGSYVVILETFVNLGPIVDMCVVDLDRQGQGQIVTCSG  377 (1096)
T ss_pred             EEEEecCCcchhhhhhcccCceEEEeccCCceeeEEccccCCCCchhhhhhhcccccceeeEEEEeccccCCceEEEEeC
Confidence            344455666667788888889899999887766666554                         1111 1234566654 


Q ss_pred             --CCCeEEEEECCCC-eE--EEEEcccCCcEEEEE--EcC--CCEEEEEECCCeEEEEeCCCcEEEE-EeCCCCCEEEEE
Q psy7057          57 --WDMTAKLWCLESQ-QC--KLTIRQHEMAVWGVI--QLA--NGIIVTGCADKTIKLHSEEGEFLKT-LTGHTDCVRGLA  126 (557)
Q Consensus        57 --~Dg~i~iwd~~~~-~~--~~~l~~h~~~V~~l~--~~~--~~~l~sgs~dg~I~vwd~~~~~~~~-l~~h~~~V~~l~  126 (557)
                        .||++|+....-+ ..  ...+.| -..++.+.  +.+  +..++.+-.+ .-++...+++...+ ..+.......+.
T Consensus       378 a~kdgSLRiiRngi~I~e~A~i~l~G-ikg~w~lk~~v~~~~d~ylvlsf~~-eTrvl~i~~e~ee~~~~gf~~~~~Tif  455 (1096)
T KOG1897|consen  378 AFKDGSLRIIRNGIGIDELASIDLPG-IKGMWSLKSMVDENYDNYLVLSFIS-ETRVLNISEEVEETEDPGFSTDEQTIF  455 (1096)
T ss_pred             CCCCCcEEEEecccccceeeEeecCC-ccceeEeeccccccCCcEEEEEecc-ceEEEEEccceEEeccccccccCceEE
Confidence              5899999864332 11  122344 44566766  333  3445444333 33444444442221 122233333444


Q ss_pred             EeC--CCeEEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE-cCCEEEEEeCCCeEEEEECCCC--ce--EeeCCcc
Q psy7057         127 VLN--DTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA-HGDLITSGGEDQCVCVYQNKAQ--NS--FMIPAMS  199 (557)
Q Consensus       127 ~~~--~~~lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~-~~~~l~s~s~Dg~I~iwd~~~~--~~--~~~~~~~  199 (557)
                      .+.  ...++-.. ...||+++-.  ..+..+....+.....+. +...++.++.++.+...+....  +.  -......
T Consensus       456 ~S~i~g~~lvQvT-s~~iRl~ss~--~~~~~W~~p~~~ti~~~~~n~sqVvvA~~~~~l~y~~i~~~~l~e~~~~~~e~e  532 (1096)
T KOG1897|consen  456 CSTINGNQLVQVT-SNSIRLVSSA--GLRSEWRPPGKITIGVVSANASQVVVAGGGLALFYLEIEDGGLREVSHKEFEYE  532 (1096)
T ss_pred             EEccCCceEEEEe-cccEEEEcch--hhhhcccCCCceEEEEEeecceEEEEecCccEEEEEEeeccceeeeeeheecce
Confidence            332  12244222 2457777732  233444433333333333 5556777777777766664333  22  2234557


Q ss_pred             EEEEEEcCCCc-------EEEEEcCCcEEEEecCCCCc-chhHHHhc--ccceeEEEeccCCCceeEEEEeCCCcEEEEe
Q psy7057         200 VWAVAILPNSD-------IVTGSSDGIVRVFSANPDRQ-AEDAVQAQ--YAEEVKKLKSANEQEIGGVKVSDDGIVRVFS  269 (557)
Q Consensus       200 v~~v~~~p~g~-------l~sg~~Dg~I~iwd~~~~~~-~~~~~~~~--~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~  269 (557)
                      |.|+.++|-++       ++.|..+..+.+....+... ........  ...++.... ...+..++.++..||.+..|-
T Consensus       533 vaCLDisp~~d~~~~s~~~aVG~Ws~~~~~l~~~pd~~~~~~~~l~~~~iPRSIl~~~-~e~d~~yLlvalgdG~l~~fv  611 (1096)
T KOG1897|consen  533 VACLDISPLGDAPNKSRLLAVGLWSDISMILTFLPDLILITHEQLSGEIIPRSILLTT-FEGDIHYLLVALGDGALLYFV  611 (1096)
T ss_pred             eEEEecccCCCCCCcceEEEEEeecceEEEEEECCCcceeeeeccCCCccchheeeEE-eeccceEEEEEcCCceEEEEE
Confidence            89999987532       66777777766655443322 11111111  111121111 222255678888999887776


Q ss_pred             cCC
Q psy7057         270 ANP  272 (557)
Q Consensus       270 ~~~  272 (557)
                      ++.
T Consensus       612 ~d~  614 (1096)
T KOG1897|consen  612 LDI  614 (1096)
T ss_pred             EEc
Confidence            544

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=90.33  E-value=0.92  Score=31.75  Aligned_cols=31  Identities=32%  Similarity=0.398  Sum_probs=26.0

Q ss_pred             CccEEEEEEcCCCc-EEEEEcCCcEEEEecCC
Q psy7057         197 AMSVWAVAILPNSD-IVTGSSDGIVRVFSANP  227 (557)
Q Consensus       197 ~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~  227 (557)
                      ...|.+++|+|..+ ++.+..+|.|.++.++.
T Consensus        11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl~~   42 (47)
T PF12894_consen   11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRLNW   42 (47)
T ss_pred             CCcEEEEEECCCCCEEEEEECCCeEEEEECCC
Confidence            34688999999998 78899999999998843

>PLN00033 photosystem II stability/assembly factor; Provisional

Probab=90.25  E-value=21  Score=37.49  Aligned_cols=106  Identities=10%  Similarity=-0.030  Sum_probs=69.5

Q ss_pred             CCcEEEEEEcCCCEEEEEECCCeEEEEeCCCc-----EEEEEeC--CCCCEEEEEEeCCCeEEEEECCCeEEEEECCCCe
Q psy7057          79 EMAVWGVIQLANGIIVTGCADKTIKLHSEEGE-----FLKTLTG--HTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGK  151 (557)
Q Consensus        79 ~~~V~~l~~~~~~~l~sgs~dg~I~vwd~~~~-----~~~~l~~--h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~  151 (557)
                      ...+.++.+.+++.++..+.+|.+..-+..+.     ....+..  -...+.++.+.+++.++.++..|.+.... ..|+
T Consensus       280 ~~~l~~v~~~~dg~l~l~g~~G~l~~S~d~G~~~~~~~f~~~~~~~~~~~l~~v~~~~d~~~~a~G~~G~v~~s~-D~G~  358 (398)
T PLN00033        280 ARRIQNMGWRADGGLWLLTRGGGLYVSKGTGLTEEDFDFEEADIKSRGFGILDVGYRSKKEAWAAGGSGILLRST-DGGK  358 (398)
T ss_pred             ccceeeeeEcCCCCEEEEeCCceEEEecCCCCcccccceeecccCCCCcceEEEEEcCCCcEEEEECCCcEEEeC-CCCc
Confidence            45688899998886666667788765544443     1222221  22358899999888888888889887765 3444


Q ss_pred             EEEEE---eCCCCcEEEEEE-cCCEEEEEeCCCeEEEE
Q psy7057         152 CVHTM---YGHPNFIYSVAA-HGDLITSGGEDQCVCVY  185 (557)
Q Consensus       152 ~~~~~---~~h~~~V~~l~~-~~~~l~s~s~Dg~I~iw  185 (557)
                      .=...   ..-....+.+.| +.+..+..+.+|.|.-|
T Consensus       359 tW~~~~~~~~~~~~ly~v~f~~~~~g~~~G~~G~il~~  396 (398)
T PLN00033        359 SWKRDKGADNIAANLYSVKFFDDKKGFVLGNDGVLLRY  396 (398)
T ss_pred             ceeEccccCCCCcceeEEEEcCCCceEEEeCCcEEEEe
Confidence            32222   223467889998 55667777888887655

>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases

Probab=90.23  E-value=23  Score=36.10  Aligned_cols=26  Identities=31%  Similarity=0.442  Sum_probs=23.0

Q ss_pred             cEEEEEEcCCCcEEEEECCCcEEEEc
Q psy7057          14 DVRSLSVTPDGCILSASRDKSAKLWK   39 (557)
Q Consensus        14 ~V~~l~~spdg~l~sgs~Dg~V~iWd   39 (557)
                      .-++|+|.|||+++.+...|.|++++
T Consensus         3 ~P~~~a~~pdG~l~v~e~~G~i~~~~   28 (331)
T PF07995_consen    3 NPRSMAFLPDGRLLVAERSGRIWVVD   28 (331)
T ss_dssp             SEEEEEEETTSCEEEEETTTEEEEEE
T ss_pred             CceEEEEeCCCcEEEEeCCceEEEEe
Confidence            35789999999988888899999998

The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=90.20  E-value=9.4  Score=40.44  Aligned_cols=163  Identities=13%  Similarity=0.045  Sum_probs=83.5

Q ss_pred             EEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEE--EEECC--CeEEEEeCCCcEEEEEeCCCCCEEEEEEeCCCe-EE
Q psy7057          61 AKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIV--TGCAD--KTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTD-FV  134 (557)
Q Consensus        61 i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~--sgs~d--g~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~~~-lv  134 (557)
                      +.+=|.. +.....+..-...+..-+|+|++ .++  +-...  ..+.+++........+......-..-.|+|+|+ ++
T Consensus       175 l~~~D~d-g~~~~~l~~~~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~~~g~~~~P~fspDG~~l~  253 (425)
T COG0823         175 LALGDYD-GYNQQKLTDSGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILNFNGNNGAPAFSPDGSKLA  253 (425)
T ss_pred             EEEEccC-CcceeEecccCcceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeeccCCccCCccCCCCCCEEE
Confidence            3343433 44444555445566667888877 222  22222  357888844333222222333344567899987 33


Q ss_pred             -EEECCCe--EEEEECCCCeEEEEEeCCCCc--EEEEEEcCCEEE-EEeCCCeEEEE--ECCCC--ceEeeCCccEEEEE
Q psy7057         135 -SCSNDAS--IRVWDSTTGKCVHTMYGHPNF--IYSVAAHGDLIT-SGGEDQCVCVY--QNKAQ--NSFMIPAMSVWAVA  204 (557)
Q Consensus       135 -s~s~Dg~--I~vwd~~~~~~~~~~~~h~~~--V~~l~~~~~~l~-s~s~Dg~I~iw--d~~~~--~~~~~~~~~v~~v~  204 (557)
                       +...|+.  |.+.|+.++. +..+..-.+.  -.++..+|+.++ +.+..|.-.||  +....  +.+......-..-.
T Consensus       254 f~~~rdg~~~iy~~dl~~~~-~~~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~~riT~~~~~~~~p~  332 (425)
T COG0823         254 FSSSRDGSPDIYLMDLDGKN-LPRLTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQVTRLTFSGGGNSNPV  332 (425)
T ss_pred             EEECCCCCccEEEEcCCCCc-ceecccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCceeEeeccCCCCcCcc
Confidence             6777776  5555766555 3334322211  123333787655 55566655555  43333  34433333333778


Q ss_pred             EcCCCc-EEEEE-cCCc--EEEEec
Q psy7057         205 ILPNSD-IVTGS-SDGI--VRVFSA  225 (557)
Q Consensus       205 ~~p~g~-l~sg~-~Dg~--I~iwd~  225 (557)
                      ++|+|+ |+..+ .+|.  |.+.++
T Consensus       333 ~SpdG~~i~~~~~~~g~~~i~~~~~  357 (425)
T COG0823         333 WSPDGDKIVFESSSGGQWDIDKNDL  357 (425)
T ss_pred             CCCCCCEEEEEeccCCceeeEEecc
Confidence            999999 44333 2454  444444

>KOG4441|consensus

Probab=90.18  E-value=12  Score=41.42  Aligned_cols=178  Identities=19%  Similarity=0.238  Sum_probs=89.2

Q ss_pred             CCEEEEEECC------CeEEEEECCCCeEE--EEEcccCCcEEEEEEcCCCEEEEEECC-C-----eEEEEeCCCcE---
Q psy7057          49 VNTLLSASWD------MTAKLWCLESQQCK--LTIRQHEMAVWGVIQLANGIIVTGCAD-K-----TIKLHSEEGEF---  111 (557)
Q Consensus        49 ~~~l~sgs~D------g~i~iwd~~~~~~~--~~l~~h~~~V~~l~~~~~~~l~sgs~d-g-----~I~vwd~~~~~---  111 (557)
                      +..++.|+.+      ..+..+|+.++.-.  ..+. +...-.+++...+...++|+.| |     ++..||.....   
T Consensus       285 ~~l~~vGG~~~~~~~~~~ve~yd~~~~~w~~~a~m~-~~r~~~~~~~~~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~~  363 (571)
T KOG4441|consen  285 GKLVAVGGYNRQGQSLRSVECYDPKTNEWSSLAPMP-SPRCRVGVAVLNGKLYVVGGYDSGSDRLSSVERYDPRTNQWTP  363 (571)
T ss_pred             CeEEEECCCCCCCcccceeEEecCCcCcEeecCCCC-cccccccEEEECCEEEEEccccCCCcccceEEEecCCCCceec
Confidence            3445555555      35777887776322  2222 3333445666655688899988 3     35556633222   


Q ss_pred             EEEEeCCCCCEEEEEEeCCCeEEEEECCCe-----EEEEECCCCe--EEEEEeCCCCcEEEEEEcCCEEEEEeCCC----
Q psy7057         112 LKTLTGHTDCVRGLAVLNDTDFVSCSNDAS-----IRVWDSTTGK--CVHTMYGHPNFIYSVAAHGDLITSGGEDQ----  180 (557)
Q Consensus       112 ~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~-----I~vwd~~~~~--~~~~~~~h~~~V~~l~~~~~~l~s~s~Dg----  180 (557)
                      +..+...... .+++....-.++.|+.||.     +-.||..+.+  .+..+.......-...+++.+.++||.++    
T Consensus       364 ~a~M~~~R~~-~~v~~l~g~iYavGG~dg~~~l~svE~YDp~~~~W~~va~m~~~r~~~gv~~~~g~iYi~GG~~~~~~~  442 (571)
T KOG4441|consen  364 VAPMNTKRSD-FGVAVLDGKLYAVGGFDGEKSLNSVECYDPVTNKWTPVAPMLTRRSGHGVAVLGGKLYIIGGGDGSSNC  442 (571)
T ss_pred             cCCccCcccc-ceeEEECCEEEEEeccccccccccEEEecCCCCcccccCCCCcceeeeEEEEECCEEEEEcCcCCCccc
Confidence            1112211111 2223333333678888864     6667766543  22222221222233334888888888664    


Q ss_pred             --eEEEEECCCC--ceEeeCCc--cEEEEEEcCCCc-EEEEEcCCc-----EEEEecCCCC
Q psy7057         181 --CVCVYQNKAQ--NSFMIPAM--SVWAVAILPNSD-IVTGSSDGI-----VRVFSANPDR  229 (557)
Q Consensus       181 --~I~iwd~~~~--~~~~~~~~--~v~~v~~~p~g~-l~sg~~Dg~-----I~iwd~~~~~  229 (557)
                        ++..||..+.  ..+..-..  .-..++.. ++. ++.||.|+.     |..+|..+.+
T Consensus       443 l~sve~YDP~t~~W~~~~~M~~~R~~~g~a~~-~~~iYvvGG~~~~~~~~~VE~ydp~~~~  502 (571)
T KOG4441|consen  443 LNSVECYDPETNTWTLIAPMNTRRSGFGVAVL-NGKIYVVGGFDGTSALSSVERYDPETNQ  502 (571)
T ss_pred             cceEEEEcCCCCceeecCCcccccccceEEEE-CCEEEEECCccCCCccceEEEEcCCCCc
Confidence              4667775544  21111110  11123333 444 677887763     5667766544

>PHA02713 hypothetical protein; Provisional

Probab=90.16  E-value=6.5  Score=43.33  Aligned_cols=60  Identities=10%  Similarity=0.140  Sum_probs=37.0

Q ss_pred             Ce-EEEEECC------CeEEEEECCC---CeEEEEEeCCCCcEEEEEEcCCEEEEEeCCC--eEEEEECCCC
Q psy7057         131 TD-FVSCSND------ASIRVWDSTT---GKCVHTMYGHPNFIYSVAAHGDLITSGGEDQ--CVCVYQNKAQ  190 (557)
Q Consensus       131 ~~-lvs~s~D------g~I~vwd~~~---~~~~~~~~~h~~~V~~l~~~~~~l~s~s~Dg--~I~iwd~~~~  190 (557)
                      ++ ++.|+.+      ..+..||..+   ++.+..+.........+..++.+.++|+.++  ++..||..+.
T Consensus       464 ~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~~~~~~~~~~~iyv~Gg~~~~~~~e~yd~~~~  535 (557)
T PHA02713        464 DDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLSALHTILHDNTIMMLHCYESYMLQDTFNVYTY  535 (557)
T ss_pred             CEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCcccccceeEEECCEEEEEeeecceeehhhcCcccc
Confidence            44 5567654      2467788876   3444444433334444455888889999888  6667775544

>KOG2079|consensus

Probab=90.13  E-value=0.8  Score=52.10  Aligned_cols=96  Identities=16%  Similarity=0.244  Sum_probs=66.5

Q ss_pred             CCEEEEEECCCeEEEEECCCC-eEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEE
Q psy7057          49 VNTLLSASWDMTAKLWCLESQ-QCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGL  125 (557)
Q Consensus        49 ~~~l~sgs~Dg~i~iwd~~~~-~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l  125 (557)
                      +..++.|+..|.+-..|+... .+...=..-..+|++++|+.+| .++.|-.+|.|.+|| .+++.++.+..|..+.+++
T Consensus        99 ~~~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~t~v  178 (1206)
T KOG2079|consen   99 VVPIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPVTGV  178 (1206)
T ss_pred             eeeEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCccceE
Confidence            345777888888888886543 1111112236799999999999 788888999999999 4557788887777766665


Q ss_pred             EEe---CCC-eEEEEECCCeEEEEE
Q psy7057         126 AVL---NDT-DFVSCSNDASIRVWD  146 (557)
Q Consensus       126 ~~~---~~~-~lvs~s~Dg~I~vwd  146 (557)
                      -++   .++ .++++...|.  +|.
T Consensus       179 i~v~~t~~nS~llt~D~~Gs--f~~  201 (1206)
T KOG2079|consen  179 IFVGRTSQNSKLLTSDTGGS--FWK  201 (1206)
T ss_pred             EEEEEeCCCcEEEEccCCCc--eEE
Confidence            543   333 3667777675  454

>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=89.86  E-value=22  Score=35.21  Aligned_cols=148  Identities=12%  Similarity=0.137  Sum_probs=89.1

Q ss_pred             eccCcccEEEEEEcCCCc-EEEEECCCcEEEEc-C----------------CCCCCCCCCCEEEEEECCCeEEEEECCCC
Q psy7057           8 LYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWK-P----------------NDLSPGAKVNTLLSASWDMTAKLWCLESQ   69 (557)
Q Consensus         8 l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd-~----------------~~~~~~~~~~~l~sgs~Dg~i~iwd~~~~   69 (557)
                      +.|-...|.++.|+|+.+ |++......-.+|= .                +.+.+...+.+.++--++.++.++.+...
T Consensus        81 i~g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~~  160 (316)
T COG3204          81 ILGETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLFTVDAD  160 (316)
T ss_pred             cccccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccccCChhHeEEecCCEEEEEehhcceEEEEEEcCC
Confidence            345556699999999987 77777666666652 2                22566666777777778888888877655


Q ss_pred             eEEE-------EEc--cc-CCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcE----EEEEeCCC-------CCEEEEEE
Q psy7057          70 QCKL-------TIR--QH-EMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEF----LKTLTGHT-------DCVRGLAV  127 (557)
Q Consensus        70 ~~~~-------~l~--~h-~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~----~~~l~~h~-------~~V~~l~~  127 (557)
                      ..+.       .+.  .+ +...-.++|.|.. .|+.+-...-+.|+..++.+    .+....+.       ..|.++.+
T Consensus       161 t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~~~~l~~~~~~~~~~~~~~f~~DvSgl~~  240 (316)
T COG3204         161 TTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQSPSSLSVHASLDPTADRDLFVLDVSGLEF  240 (316)
T ss_pred             ccEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEecCCcccccccccCcccccceEeecccccee
Confidence            3221       221  12 4556789999966 77777777777777633211    11111222       23556666


Q ss_pred             eCC-Ce-EEEEECCCeEEEEECCCCeEEEEE
Q psy7057         128 LND-TD-FVSCSNDASIRVWDSTTGKCVHTM  156 (557)
Q Consensus       128 ~~~-~~-lvs~s~Dg~I~vwd~~~~~~~~~~  156 (557)
                      .+. +. ++-+..++.+.-.|. .|.++..+
T Consensus       241 ~~~~~~LLVLS~ESr~l~Evd~-~G~~~~~l  270 (316)
T COG3204         241 NAITNSLLVLSDESRRLLEVDL-SGEVIELL  270 (316)
T ss_pred             cCCCCcEEEEecCCceEEEEec-CCCeeeeE
Confidence            644 33 445556666666663 45544443

>KOG2280|consensus

Probab=89.46  E-value=5.4  Score=44.08  Aligned_cols=171  Identities=12%  Similarity=0.071  Sum_probs=90.1

Q ss_pred             CeEEEEECCCCeEEEEEcccCCcEEEEEEcCCCEEEEEECCCeEEEEeCCCcEEEEE----eCCCCCEEEEEEeCCCeEE
Q psy7057          59 MTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKTL----TGHTDCVRGLAVLNDTDFV  134 (557)
Q Consensus        59 g~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~~~~~~~~l----~~h~~~V~~l~~~~~~~lv  134 (557)
                      -.|+|+++ +|+.+.++.-....+..+.|+.+..|++-..+|++++++.-|..+...    ......|..+.+..+|..+
T Consensus        64 ~~I~If~~-sG~lL~~~~w~~~~lI~mgWs~~eeLI~v~k~g~v~Vy~~~ge~ie~~svg~e~~~~~I~ec~~f~~GVav  142 (829)
T KOG2280|consen   64 PYIRIFNI-SGQLLGRILWKHGELIGMGWSDDEELICVQKDGTVHVYGLLGEFIESNSVGFESQMSDIVECRFFHNGVAV  142 (829)
T ss_pred             eeEEEEec-cccchHHHHhcCCCeeeecccCCceEEEEeccceEEEeecchhhhcccccccccccCceeEEEEecCceEE
Confidence            34778875 456665554444477899999999999999999999999777665542    1222335555554455433


Q ss_pred             EEECCCeEEEEECCCCeEEEEEeCC---CCcEEEEEE-cCC----EEEEEe-CCCeEEEEECCC----CceEeeCCccEE
Q psy7057         135 SCSNDASIRVWDSTTGKCVHTMYGH---PNFIYSVAA-HGD----LITSGG-EDQCVCVYQNKA----QNSFMIPAMSVW  201 (557)
Q Consensus       135 s~s~Dg~I~vwd~~~~~~~~~~~~h---~~~V~~l~~-~~~----~l~s~s-~Dg~I~iwd~~~----~~~~~~~~~~v~  201 (557)
                      - ..+|.+.+-+-.....+.++..-   .-.-.|-+. .+.    .++-.. ..+ ..++-...    ...+....+.+.
T Consensus       143 l-t~~g~v~~i~~~~~~~~~~~~diP~~~~~~~~Wt~~~~~~~~~~ll~v~~~v~-~~~~q~~~~~~q~~~~~~~~~~~~  220 (829)
T KOG2280|consen  143 L-TVSGQVILINGVEEPKLRKMPDIPYNELPKSCWTVFQPHRQSTILLDVDVAVG-LHICQVEESRVQLHALSWPNSSVV  220 (829)
T ss_pred             E-ecCCcEEEEcCCCcchhhhCCCCCCccCCCcceeEecCCCcceeEEeechhhh-hcccceecccccccccCCCCceEE
Confidence            2 23344443331111122222221   111111111 111    111111 000 01111111    122233345678


Q ss_pred             EEEEcCCCc-EEEEEcCCcEEEEecCCCCcch
Q psy7057         202 AVAILPNSD-IVTGSSDGIVRVFSANPDRQAE  232 (557)
Q Consensus       202 ~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~  232 (557)
                      .++++|+.+ |+.=.++|.|.+-+.+..+...
T Consensus       221 ki~VS~n~~~laLyt~~G~i~~vs~D~~~~lc  252 (829)
T KOG2280|consen  221 KISVSPNRRFLALYTETGKIWVVSIDLSQILC  252 (829)
T ss_pred             EEEEcCCcceEEEEecCCcEEEEecchhhhhh
Confidence            899999988 7777889999988877655443

>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length

Probab=89.25  E-value=7.6  Score=42.92  Aligned_cols=94  Identities=15%  Similarity=0.155  Sum_probs=64.3

Q ss_pred             EEEEECCCeEEEEECCCCeEEEEEc-ccCCcEEEEEEcC--CC-EEEEEECCCeEEEEeC----------CCcEEEE--E
Q psy7057          52 LLSASWDMTAKLWCLESQQCKLTIR-QHEMAVWGVIQLA--NG-IIVTGCADKTIKLHSE----------EGEFLKT--L  115 (557)
Q Consensus        52 l~sgs~Dg~i~iwd~~~~~~~~~l~-~h~~~V~~l~~~~--~~-~l~sgs~dg~I~vwd~----------~~~~~~~--l  115 (557)
                      .++-+...++.|||...+.....-. ...+.|.++.|..  ++ .+++.+-...|.++..          ...+++.  +
T Consensus        44 a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~~~p~w~~i~~i~i  123 (631)
T PF12234_consen   44 AVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTNKGPSWAPIRKIDI  123 (631)
T ss_pred             EEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhcCCcccceeEEEEe
Confidence            3333445678999998876443322 3577899999875  55 7888888889988751          1122333  2


Q ss_pred             eCCC-CCEEEEEEeCCCeEEEEECCCeEEEEE
Q psy7057         116 TGHT-DCVRGLAVLNDTDFVSCSNDASIRVWD  146 (557)
Q Consensus       116 ~~h~-~~V~~l~~~~~~~lvs~s~Dg~I~vwd  146 (557)
                      ..|+ .+|.+..|.++|.++.|+. ..+.|+|
T Consensus       124 ~~~T~h~Igds~Wl~~G~LvV~sG-Nqlfv~d  154 (631)
T PF12234_consen  124 SSHTPHPIGDSIWLKDGTLVVGSG-NQLFVFD  154 (631)
T ss_pred             ecCCCCCccceeEecCCeEEEEeC-CEEEEEC
Confidence            3454 6899999999999887664 5677776

This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.

>COG1520 FOG: WD40-like repeat [Function unknown]

Probab=89.14  E-value=30  Score=35.80  Aligned_cols=183  Identities=15%  Similarity=0.115  Sum_probs=103.3

Q ss_pred             CCEEEEEECCCeEEEEECCCCeEEEEEccc--CCcEEEEEEcCCCEEEEEECCCeEEEEeC-CCcEEEEEeCCC-CCEEE
Q psy7057          49 VNTLLSASWDMTAKLWCLESQQCKLTIRQH--EMAVWGVIQLANGIIVTGCADKTIKLHSE-EGEFLKTLTGHT-DCVRG  124 (557)
Q Consensus        49 ~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h--~~~V~~l~~~~~~~l~sgs~dg~I~vwd~-~~~~~~~l~~h~-~~V~~  124 (557)
                      ...+..+..+|.|.-.|.++++.+.....-  ...+.+-....+|.++.++.++.+..+|. +|..+....... -.+..
T Consensus        68 dg~v~~~~~~G~i~A~d~~~g~~~W~~~~~~~~~~~~~~~~~~~G~i~~g~~~g~~y~ld~~~G~~~W~~~~~~~~~~~~  147 (370)
T COG1520          68 DGTVYVGTRDGNIFALNPDTGLVKWSYPLLGAVAQLSGPILGSDGKIYVGSWDGKLYALDASTGTLVWSRNVGGSPYYAS  147 (370)
T ss_pred             CCeEEEecCCCcEEEEeCCCCcEEecccCcCcceeccCceEEeCCeEEEecccceEEEEECCCCcEEEEEecCCCeEEec
Confidence            456777788999999999988866543322  12233323333788999999998888886 888888777555 12222


Q ss_pred             EEEeCCCeEEEEECCCeEEEEECCCCeEEEEEeCCCC---cEE-EEEEcCCEEEEEeC--CCeEEEEECCCCceEee---
Q psy7057         125 LAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPN---FIY-SVAAHGDLITSGGE--DQCVCVYQNKAQNSFMI---  195 (557)
Q Consensus       125 l~~~~~~~lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~---~V~-~l~~~~~~l~s~s~--Dg~I~iwd~~~~~~~~~---  195 (557)
                      -.+..++.+..++.++.+.-.|..+++.+-.......   .+. ........++.++.  ++.+.-.+.......-.   
T Consensus       148 ~~v~~~~~v~~~s~~g~~~al~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~vy~~~~~~~~~~~a~~~~~G~~~w~~~~  227 (370)
T COG1520         148 PPVVGDGTVYVGTDDGHLYALNADTGTLKWTYETPAPLSLSIYGSPAIASGTVYVGSDGYDGILYALNAEDGTLKWSQKV  227 (370)
T ss_pred             CcEEcCcEEEEecCCCeEEEEEccCCcEEEEEecCCccccccccCceeecceEEEecCCCcceEEEEEccCCcEeeeeee
Confidence            2333445566666789999999888887666443221   111 01122334444444  55555555443311111   


Q ss_pred             -CCc---------cEEEEEEcCCCcEEEEEcCCcEEEEecCCCCcc
Q psy7057         196 -PAM---------SVWAVAILPNSDIVTGSSDGIVRVFSANPDRQA  231 (557)
Q Consensus       196 -~~~---------~v~~v~~~p~g~l~sg~~Dg~I~iwd~~~~~~~  231 (557)
                       +..         .+..-.+.-++.+..++.++.+...+..+++..
T Consensus       228 ~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~~~l~~~~G~~~  273 (370)
T COG1520         228 SQTIGRTAISTTPAVDGGPVYVDGGVYAGSYGGKLLCLDADTGELI  273 (370)
T ss_pred             ecccCcccccccccccCceEEECCcEEEEecCCeEEEEEcCCCceE
Confidence             100         011111111233567777787777777766543

>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=89.09  E-value=25  Score=34.72  Aligned_cols=180  Identities=17%  Similarity=0.149  Sum_probs=100.0

Q ss_pred             CCCCCCCCEEEEEECC-----CeEEEEECCCC-eEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEE----------
Q psy7057          43 LSPGAKVNTLLSASWD-----MTAKLWCLESQ-QCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLH----------  105 (557)
Q Consensus        43 ~~~~~~~~~l~sgs~D-----g~i~iwd~~~~-~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vw----------  105 (557)
                      -.+++++.+|...-.|     |.|-|||...+ +.+..+..|.-....+.+.+|| .++.+  +|-|...          
T Consensus       119 Gvfs~dG~~LYATEndfd~~rGViGvYd~r~~fqrvgE~~t~GiGpHev~lm~DGrtlvva--nGGIethpdfgR~~lNl  196 (366)
T COG3490         119 GVFSPDGRLLYATENDFDPNRGVIGVYDAREGFQRVGEFSTHGIGPHEVTLMADGRTLVVA--NGGIETHPDFGRTELNL  196 (366)
T ss_pred             cccCCCCcEEEeecCCCCCCCceEEEEecccccceecccccCCcCcceeEEecCCcEEEEe--CCceecccccCccccch
Confidence            3567778888876554     67889998754 4556677777777788899999 44332  2333332          


Q ss_pred             ----------e-CCCcEEEE--Ee--CCCCCEEEEEEeCCCeEEEEEC------CCeEEEEECCCCeEEEEEeCC-----
Q psy7057         106 ----------S-EEGEFLKT--LT--GHTDCVRGLAVLNDTDFVSCSN------DASIRVWDSTTGKCVHTMYGH-----  159 (557)
Q Consensus       106 ----------d-~~~~~~~~--l~--~h~~~V~~l~~~~~~~lvs~s~------Dg~I~vwd~~~~~~~~~~~~h-----  159 (557)
                                | .+|..+.+  +.  .+.-+|+.++..+++.+..++.      |---.+=-...++++.-+.-.     
T Consensus       197 dsMePSlvlld~atG~liekh~Lp~~l~~lSiRHld~g~dgtvwfgcQy~G~~~d~ppLvg~~~~g~~l~~~~~pee~~~  276 (366)
T COG3490         197 DSMEPSLVLLDAATGNLIEKHTLPASLRQLSIRHLDIGRDGTVWFGCQYRGPRNDLPPLVGHFRKGEPLEFLDLPEEQTA  276 (366)
T ss_pred             hhcCccEEEEeccccchhhhccCchhhhhcceeeeeeCCCCcEEEEEEeeCCCccCCcceeeccCCCcCcccCCCHHHHH
Confidence                      2 22332221  21  2345688888888888765542      111111111234444333211     


Q ss_pred             --CCcEEEEEEc--CCEE-EEEeCCCeEEEEECCCCceEeeCC-ccEEEEEEcCCCcEEEEEcCCcEEEEec
Q psy7057         160 --PNFIYSVAAH--GDLI-TSGGEDQCVCVYQNKAQNSFMIPA-MSVWAVAILPNSDIVTGSSDGIVRVFSA  225 (557)
Q Consensus       160 --~~~V~~l~~~--~~~l-~s~s~Dg~I~iwd~~~~~~~~~~~-~~v~~v~~~p~g~l~sg~~Dg~I~iwd~  225 (557)
                        ...|-+|+.+  ..++ +|+=..++..+||..+........ ..+..|+....| |++.+.+|.+..++.
T Consensus       277 ~~anYigsiA~n~~~glV~lTSP~GN~~vi~da~tG~vv~~a~l~daaGva~~~~g-f~vssg~G~~~~~s~  347 (366)
T COG3490         277 AFANYIGSIAANRRDGLVALTSPRGNRAVIWDAATGAVVSEAALPDAAGVAAAKGG-FAVSSGQGRIIFYSR  347 (366)
T ss_pred             HHHhhhhheeecccCCeEEEecCCCCeEEEEEcCCCcEEecccccccccceeccCc-eEEecCCceEEeccc
Confidence              2356677773  3344 444456678899988773332211 112222222222 888888999988854

>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=89.03  E-value=33  Score=36.07  Aligned_cols=228  Identities=14%  Similarity=0.079  Sum_probs=112.1

Q ss_pred             CCCCCCCCEEEEE-ECCC----eEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCC-----------eEEEE
Q psy7057          43 LSPGAKVNTLLSA-SWDM----TAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADK-----------TIKLH  105 (557)
Q Consensus        43 ~~~~~~~~~l~sg-s~Dg----~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg-----------~I~vw  105 (557)
                      +.++|++++++.+ +..|    +++++|+++++.+....... ....+.|.+++ .|+....+.           .|+.|
T Consensus       129 ~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~-~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v~~~  207 (414)
T PF02897_consen  129 FSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENP-KFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQVYRH  207 (414)
T ss_dssp             EEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEE-ESEEEEECTTSSEEEEEECSTTTSS-CCGCCEEEEEE
T ss_pred             eeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCccccc-ccceEEEeCCCCEEEEEEeCcccccccCCCCcEEEEE
Confidence            3466788887754 4444    49999999997665321111 11238999987 444444332           25666


Q ss_pred             eCCC---cEEEEEeCCCCC--EEEEEEeCCCeEE--EEECC---CeEEEEECCCC-----eEEEEEeCCCCcEEEEEEcC
Q psy7057         106 SEEG---EFLKTLTGHTDC--VRGLAVLNDTDFV--SCSND---ASIRVWDSTTG-----KCVHTMYGHPNFIYSVAAHG  170 (557)
Q Consensus       106 d~~~---~~~~~l~~h~~~--V~~l~~~~~~~lv--s~s~D---g~I~vwd~~~~-----~~~~~~~~h~~~V~~l~~~~  170 (557)
                      .+..   .....+......  ...+..+++++++  .....   ..+.+.++..+     +.........+....+...+
T Consensus       208 ~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~~~~~~~~~~v~~~~  287 (414)
T PF02897_consen  208 KLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLSPREDGVEYYVDHHG  287 (414)
T ss_dssp             ETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEEESSSS-EEEEEEET
T ss_pred             ECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEEeCCCCceEEEEEccC
Confidence            6322   112334333322  5677888888733  33332   34788888764     33333333444445555556


Q ss_pred             CEEEEEeC----CCeEEEEECCCCc------eEeeCCc--cEEEEEEcCCCcEEEEEcCCc--EEEEecC-CCCcchhHH
Q psy7057         171 DLITSGGE----DQCVCVYQNKAQN------SFMIPAM--SVWAVAILPNSDIVTGSSDGI--VRVFSAN-PDRQAEDAV  235 (557)
Q Consensus       171 ~~l~s~s~----Dg~I~iwd~~~~~------~~~~~~~--~v~~v~~~p~g~l~sg~~Dg~--I~iwd~~-~~~~~~~~~  235 (557)
                      ..|+.-+.    .+.|...++....      .+..+..  .+..+....+.-++.--.++.  |+++++. .........
T Consensus       288 ~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~Lvl~~~~~~~~~l~v~~~~~~~~~~~~~~  367 (414)
T PF02897_consen  288 DRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDVSLEDVSLFKDYLVLSYRENGSSRLRVYDLDDGKESREIPL  367 (414)
T ss_dssp             TEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSEEEEEEEEETTEEEEEEEETTEEEEEEEETT-TEEEEEEES
T ss_pred             CEEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCceeEEEEEEECCEEEEEEEECCccEEEEEECCCCcEEeeecC
Confidence            54443332    3466666755441      3334443  355555543333555555554  7788887 332221111


Q ss_pred             HhcccceeEEEeccCCCceeEEEEeC---CCcEEEEecCCC
Q psy7057         236 QAQYAEEVKKLKSANEQEIGGVKVSD---DGIVRVFSANPD  273 (557)
Q Consensus       236 ~~~~~~~v~~l~~~~~~~~~~vs~s~---DG~IrvW~~~~~  273 (557)
                      .  ..+.+..+..........++.++   =+++..|++.++
T Consensus       368 p--~~g~v~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~t~  406 (414)
T PF02897_consen  368 P--EAGSVSGVSGDFDSDELRFSYSSFTTPPTVYRYDLATG  406 (414)
T ss_dssp             S--SSSEEEEEES-TT-SEEEEEEEETTEEEEEEEEETTTT
T ss_pred             C--cceEEeccCCCCCCCEEEEEEeCCCCCCEEEEEECCCC
Confidence            1  12233344333333333444432   245666666554

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....

>KOG1916|consensus

Probab=87.88  E-value=0.053  Score=59.91  Aligned_cols=177  Identities=12%  Similarity=0.120  Sum_probs=101.3

Q ss_pred             eccCcccEEEEEEcCCCc--EEEEECCCcEEEEcCCC--------------------------CCCCCCCCEEEEEECCC
Q psy7057           8 LYGHSMDVRSLSVTPDGC--ILSASRDKSAKLWKPND--------------------------LSPGAKVNTLLSASWDM   59 (557)
Q Consensus         8 l~gH~~~V~~l~~spdg~--l~sgs~Dg~V~iWd~~~--------------------------~~~~~~~~~l~sgs~Dg   59 (557)
                      ++|..+.|-.+.|-....  ++  -.-|.+.+|++.-                          ..+.+..-++..+-.++
T Consensus       128 ~kgf~G~v~dl~fah~~~pk~~--~~vg~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~~V~wcp~~~~~~~ic~~~~~~  205 (1283)
T KOG1916|consen  128 AKGFPGGVGDLQFAHTKCPKGR--RLVGELFVYDVDVLQGEIQPQLEVTPITPYGSDPQLVSWCPIAVNKVYICYGLKGG  205 (1283)
T ss_pred             HhcCCCCcccccccccCChHHH--HHhhhhheeehHhhccccccceEEeecCcCCCCcceeeecccccccceeeeccCCC
Confidence            356667777777754221  22  2235677777653                          12222345666777788


Q ss_pred             eEEEEECCCCeEEEEEcccCCcEEEEE-----------EcCCC-EEEEEECCCeEEEEe--CCC----cEEEEEeCCCC-
Q psy7057          60 TAKLWCLESQQCKLTIRQHEMAVWGVI-----------QLANG-IIVTGCADKTIKLHS--EEG----EFLKTLTGHTD-  120 (557)
Q Consensus        60 ~i~iwd~~~~~~~~~l~~h~~~V~~l~-----------~~~~~-~l~sgs~dg~I~vwd--~~~----~~~~~l~~h~~-  120 (557)
                      ++++..+.+... ..+++|...+..++           .+||| .+++++.||.+++|.  +.|    .|++..+.|.. 
T Consensus       206 ~i~lL~~~ra~~-~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qiyi~g~~~~rclhewkphd~~  284 (1283)
T KOG1916|consen  206 EIRLLNINRALR-SLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFYQIYITGKIVHRCLHEWKPHDKH  284 (1283)
T ss_pred             ceeEeeechHHH-HHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCccceeeeeeeccccHhhhhccCCCCCC
Confidence            888877655322 33456776666554           46788 788888899888887  344    34555666763 


Q ss_pred             C-EEEEEEeCC-------Ce---EEEEE-CCCeEEEEECCCCeEEEEE--------eCCCCcEEEEEE---cCCEEEEEe
Q psy7057         121 C-VRGLAVLND-------TD---FVSCS-NDASIRVWDSTTGKCVHTM--------YGHPNFIYSVAA---HGDLITSGG  177 (557)
Q Consensus       121 ~-V~~l~~~~~-------~~---lvs~s-~Dg~I~vwd~~~~~~~~~~--------~~h~~~V~~l~~---~~~~l~s~s  177 (557)
                      + |+.+ ++..       +.   +++++ ....+++|....++|+..+        ..|...|+.+..   --..+++.+
T Consensus       285 p~vC~l-c~~~~~~~v~i~~w~~~Itttd~nre~k~w~~a~w~Cll~~~~d~v~iV~p~~~~v~~~~~~~~~~~~~v~r~  363 (1283)
T KOG1916|consen  285 PRVCWL-CHKQEILVVSIGKWVLRITTTDVNREEKFWAEAPWQCLLDKLIDGVQIVGPHDGEVTDLSMCQWMTTRLVSRS  363 (1283)
T ss_pred             Cceeee-eccccccCCccceeEEEEecccCCcceeEeeccchhhhhhhcccceEeecCCCccccchhhhHHHHHHHHHhh
Confidence            2 4444 3322       22   23333 4456999998777776211        123334433222   112355667


Q ss_pred             CCCeEEEEECC
Q psy7057         178 EDQCVCVYQNK  188 (557)
Q Consensus       178 ~Dg~I~iwd~~  188 (557)
                      -+++|.+|--+
T Consensus       364 v~~~i~~~qn~  374 (1283)
T KOG1916|consen  364 VDGTIKIWQNR  374 (1283)
T ss_pred             hHHHHHHhhcc
Confidence            78889999744

>KOG3630|consensus

Probab=87.63  E-value=3.4  Score=47.59  Aligned_cols=121  Identities=12%  Similarity=0.057  Sum_probs=78.2

Q ss_pred             cEEEEEEcCCCc---EEEEECCCcEEEEcCCCC---------------------------CCCCCC-CEEEEEECCCeEE
Q psy7057          14 DVRSLSVTPDGC---ILSASRDKSAKLWKPNDL---------------------------SPGAKV-NTLLSASWDMTAK   62 (557)
Q Consensus        14 ~V~~l~~spdg~---l~sgs~Dg~V~iWd~~~~---------------------------~~~~~~-~~l~sgs~Dg~i~   62 (557)
                      +|..+...+|++   ++..+.+-.|..+|+..+                           .|+|.- ...+.+..|+.|+
T Consensus       102 pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl~  181 (1405)
T KOG3630|consen  102 PIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSLR  181 (1405)
T ss_pred             cceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccchh
Confidence            455666677776   334445557888998772                           222211 2345566777777


Q ss_pred             EEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcEEEEEeC----CCCCEEEEEEeCCCeEE
Q psy7057          63 LWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFLKTLTG----HTDCVRGLAVLNDTDFV  134 (557)
Q Consensus        63 iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~~~l~~----h~~~V~~l~~~~~~~lv  134 (557)
                      +..+........--.-...++|++|+|.| .++.|-..|++.-|....+....+.+    ....|.+|+|.....|+
T Consensus       182 V~~~~~~~~~v~s~p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~leik~~ip~Pp~~e~yrvl~v~Wl~t~efl  258 (1405)
T KOG3630|consen  182 VKSTKQLAQNVTSFPVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPSLEIKSEIPEPPVEENYRVLSVTWLSTQEFL  258 (1405)
T ss_pred             hhhhhhhhhhhcccCcccceeeEEeccccceeeEecCCCeEEEeecccceeecccCCCcCCCcceeEEEEecceeEE
Confidence            77654332222222346788999999999 89999999999999766665544432    14679999998766654

>KOG1916|consensus

Probab=87.36  E-value=0.27  Score=54.56  Aligned_cols=168  Identities=15%  Similarity=0.170  Sum_probs=93.4

Q ss_pred             CeEEEEECCC--CeEE-----EEEcccCCcEEEEEEcC---CC-EEEEEECCCeEEEEeCCCcEEEEEeCCCCCEEEEE-
Q psy7057          59 MTAKLWCLES--QQCK-----LTIRQHEMAVWGVIQLA---NG-IIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLA-  126 (557)
Q Consensus        59 g~i~iwd~~~--~~~~-----~~l~~h~~~V~~l~~~~---~~-~l~sgs~dg~I~vwd~~~~~~~~l~~h~~~V~~l~-  126 (557)
                      |.+.+|++.-  |+..     .........+.-+.|.|   +. .+..+-.+++|++...+......+.+|...+..++ 
T Consensus       153 g~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~~V~wcp~~~~~~~ic~~~~~~~i~lL~~~ra~~~l~rsHs~~~~d~a~  232 (1283)
T KOG1916|consen  153 GELFVYDVDVLQGEIQPQLEVTPITPYGSDPQLVSWCPIAVNKVYICYGLKGGEIRLLNINRALRSLFRSHSQRVTDMAF  232 (1283)
T ss_pred             hhhheeehHhhccccccceEEeecCcCCCCcceeeecccccccceeeeccCCCceeEeeechHHHHHHHhcCCCcccHHH
Confidence            5677888642  3322     22222344455556655   33 78888888999886533333344556776665554 


Q ss_pred             ----------EeCCCe-EEEEECCCeEEEEECC-----CCeEEEEEeCCCC--cEEEEEEc--------CC--EEEEEe-
Q psy7057         127 ----------VLNDTD-FVSCSNDASIRVWDST-----TGKCVHTMYGHPN--FIYSVAAH--------GD--LITSGG-  177 (557)
Q Consensus       127 ----------~~~~~~-lvs~s~Dg~I~vwd~~-----~~~~~~~~~~h~~--~V~~l~~~--------~~--~l~s~s-  177 (557)
                                ++|||. |+.++.||.++.|.+.     ...|++..+.|+.  .|+.++.+        +.  ++++++ 
T Consensus       233 ~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qiyi~g~~~~rclhewkphd~~p~vC~lc~~~~~~~v~i~~w~~~Itttd  312 (1283)
T KOG1916|consen  233 FAEGVLKLASLSPDGTVFAWAISDGSVGFYQIYITGKIVHRCLHEWKPHDKHPRVCWLCHKQEILVVSIGKWVLRITTTD  312 (1283)
T ss_pred             HhhchhhheeeCCCCcEEEEeecCCccceeeeeeeccccHhhhhccCCCCCCCceeeeeccccccCCccceeEEEEeccc
Confidence                      467877 6688888888888653     2346666777762  33333221        11  344444 


Q ss_pred             CCCeEEEEECCCCceE-eeCCccEEEEEEcCCCc-------------EEEEEcCCcEEEEecCC
Q psy7057         178 EDQCVCVYQNKAQNSF-MIPAMSVWAVAILPNSD-------------IVTGSSDGIVRVFSANP  227 (557)
Q Consensus       178 ~Dg~I~iwd~~~~~~~-~~~~~~v~~v~~~p~g~-------------l~sg~~Dg~I~iwd~~~  227 (557)
                      ...-+++|.....+.+ ......|..|. -+++.             +++.+-++.|.+|.-..
T Consensus       313 ~nre~k~w~~a~w~Cll~~~~d~v~iV~-p~~~~v~~~~~~~~~~~~~v~r~v~~~i~~~qn~~  375 (1283)
T KOG1916|consen  313 VNREEKFWAEAPWQCLLDKLIDGVQIVG-PHDGEVTDLSMCQWMTTRLVSRSVDGTIKIWQNRK  375 (1283)
T ss_pred             CCcceeEeeccchhhhhhhcccceEeec-CCCccccchhhhHHHHHHHHHhhhHHHHHHhhcch
Confidence            3456888885443222 22223444444 22332             34456688888886543

>KOG1897|consensus

Probab=87.35  E-value=62  Score=37.31  Aligned_cols=222  Identities=14%  Similarity=0.082  Sum_probs=119.3

Q ss_pred             CCCEEEEEECCCeEEEEECCCCeEE-------EEEcccCCcEEEEEEcC-----CCEEEEEE---CCCeEEEEeC----C
Q psy7057          48 KVNTLLSASWDMTAKLWCLESQQCK-------LTIRQHEMAVWGVIQLA-----NGIIVTGC---ADKTIKLHSE----E  108 (557)
Q Consensus        48 ~~~~l~sgs~Dg~i~iwd~~~~~~~-------~~l~~h~~~V~~l~~~~-----~~~l~sgs---~dg~I~vwd~----~  108 (557)
                      +...+.+||.-|.-.+-.+.+....       .++. .-.+|..++...     ++.++|++   .||++|+...    +
T Consensus       316 ~ng~lFvGS~~gdSqLi~L~~e~d~gsy~~ilet~~-NLgPI~Dm~Vvd~d~q~q~qivtCsGa~kdgSLRiiRngi~I~  394 (1096)
T KOG1897|consen  316 DNGVLFVGSRFGDSQLIKLNTEPDVGSYVVILETFV-NLGPIVDMCVVDLDRQGQGQIVTCSGAFKDGSLRIIRNGIGID  394 (1096)
T ss_pred             cCceEEEeccCCceeeEEccccCCCCchhhhhhhcc-cccceeeEEEEeccccCCceEEEEeCCCCCCcEEEEecccccc
Confidence            4567889998877677666543211       2222 234777776654     23677766   4899999851    1


Q ss_pred             CcEEEEEeCCCCCEEEEE--EeCC-CeEEEEECCCeEEEEECCCCeEEEE-EeCCCCcEEEEEE---cCCEEEEEeCCCe
Q psy7057         109 GEFLKTLTGHTDCVRGLA--VLND-TDFVSCSNDASIRVWDSTTGKCVHT-MYGHPNFIYSVAA---HGDLITSGGEDQC  181 (557)
Q Consensus       109 ~~~~~~l~~h~~~V~~l~--~~~~-~~lvs~s~Dg~I~vwd~~~~~~~~~-~~~h~~~V~~l~~---~~~~l~s~s~Dg~  181 (557)
                      -.....+.| -..++.+.  +.++ ..++.-|--+.-++..+. ++...+ ..+-......+..   .++.|+-... ..
T Consensus       395 e~A~i~l~G-ikg~w~lk~~v~~~~d~ylvlsf~~eTrvl~i~-~e~ee~~~~gf~~~~~Tif~S~i~g~~lvQvTs-~~  471 (1096)
T KOG1897|consen  395 ELASIDLPG-IKGMWSLKSMVDENYDNYLVLSFISETRVLNIS-EEVEETEDPGFSTDEQTIFCSTINGNQLVQVTS-NS  471 (1096)
T ss_pred             eeeEeecCC-ccceeEeeccccccCCcEEEEEeccceEEEEEc-cceEEeccccccccCceEEEEccCCceEEEEec-cc
Confidence            122233444 45577776  3332 123333333344455543 222111 1122222222222   4555444433 46


Q ss_pred             EEEEECCCC-ceEeeCCccEEEEEEcCCCcEEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCC--Cce---e
Q psy7057         182 VCVYQNKAQ-NSFMIPAMSVWAVAILPNSDIVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANE--QEI---G  255 (557)
Q Consensus       182 I~iwd~~~~-~~~~~~~~~v~~v~~~p~g~l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~--~~~---~  255 (557)
                      ||+++.... ..+..+......++.....+++.++.++.+....+.... ........+..++.++...|.  .+.   .
T Consensus       472 iRl~ss~~~~~~W~~p~~~ti~~~~~n~sqVvvA~~~~~l~y~~i~~~~-l~e~~~~~~e~evaCLDisp~~d~~~~s~~  550 (1096)
T KOG1897|consen  472 IRLVSSAGLRSEWRPPGKITIGVVSANASQVVVAGGGLALFYLEIEDGG-LREVSHKEFEYEVACLDISPLGDAPNKSRL  550 (1096)
T ss_pred             EEEEcchhhhhcccCCCceEEEEEeecceEEEEecCccEEEEEEeeccc-eeeeeeheecceeEEEecccCCCCCCcceE
Confidence            888886533 444444433333333333448888888888777776655 333444557778888866543  343   5


Q ss_pred             EEEEeCCCcEEEEecCCCh
Q psy7057         256 GVKVSDDGIVRVFSANPDR  274 (557)
Q Consensus       256 ~vs~s~DG~IrvW~~~~~~  274 (557)
                      ++.|..+..+++-...++.
T Consensus       551 ~aVG~Ws~~~~~l~~~pd~  569 (1096)
T KOG1897|consen  551 LAVGLWSDISMILTFLPDL  569 (1096)
T ss_pred             EEEEeecceEEEEEECCCc
Confidence            6777777777777766653

>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family

Probab=87.24  E-value=50  Score=36.14  Aligned_cols=108  Identities=11%  Similarity=0.088  Sum_probs=70.0

Q ss_pred             CCEEEEEECCCeEEEEECCCCeEEEEEcccC-CcEE---E-------EEEcCCCEEEEEECCCeEEEEe-CCCcEEEEEe
Q psy7057          49 VNTLLSASWDMTAKLWCLESQQCKLTIRQHE-MAVW---G-------VIQLANGIIVTGCADKTIKLHS-EEGEFLKTLT  116 (557)
Q Consensus        49 ~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~-~~V~---~-------l~~~~~~~l~sgs~dg~I~vwd-~~~~~~~~l~  116 (557)
                      +..++.++.++.|.-.|..+|+.+.++.... ..+.   +       +++ .++.++.++.|+.+.-.| .+|+.+....
T Consensus        69 ~g~vyv~s~~g~v~AlDa~TGk~lW~~~~~~~~~~~~~~~~~~~~rg~av-~~~~v~v~t~dg~l~ALDa~TGk~~W~~~  147 (527)
T TIGR03075        69 DGVMYVTTSYSRVYALDAKTGKELWKYDPKLPDDVIPVMCCDVVNRGVAL-YDGKVFFGTLDARLVALDAKTGKVVWSKK  147 (527)
T ss_pred             CCEEEEECCCCcEEEEECCCCceeeEecCCCCcccccccccccccccceE-ECCEEEEEcCCCEEEEEECCCCCEEeecc
Confidence            5678888889999999999999887765321 1111   1       111 145778888999999999 5788876654


Q ss_pred             C--CC--CCEEEEEEeCCCeEEEEEC------CCeEEEEECCCCeEEEEEe
Q psy7057         117 G--HT--DCVRGLAVLNDTDFVSCSN------DASIRVWDSTTGKCVHTMY  157 (557)
Q Consensus       117 ~--h~--~~V~~l~~~~~~~lvs~s~------Dg~I~vwd~~~~~~~~~~~  157 (557)
                      .  +.  ..+.+--..-++.++.++.      +|.|.-+|.++|+.+-++.
T Consensus       148 ~~~~~~~~~~tssP~v~~g~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~  198 (527)
T TIGR03075       148 NGDYKAGYTITAAPLVVKGKVITGISGGEFGVRGYVTAYDAKTGKLVWRRY  198 (527)
T ss_pred             cccccccccccCCcEEECCEEEEeecccccCCCcEEEEEECCCCceeEecc
Confidence            2  11  1122211112456555442      6899999999998876653

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.

>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin

Probab=87.05  E-value=4.8  Score=38.49  Aligned_cols=68  Identities=10%  Similarity=0.105  Sum_probs=45.5

Q ss_pred             CcEEEEEEcCCEEEEEeCCCeEEEEECCCCceE----------e-------eCCccEEEEEEcCCCcEEEEEcCCcEEEE
Q psy7057         161 NFIYSVAAHGDLITSGGEDQCVCVYQNKAQNSF----------M-------IPAMSVWAVAILPNSDIVTGSSDGIVRVF  223 (557)
Q Consensus       161 ~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~~~~~----------~-------~~~~~v~~v~~~p~g~l~sg~~Dg~I~iw  223 (557)
                      ..+..+...+.+|++.+.+|.+++||+.+.+.+          .       .....|..+.+..+|..+..-++|..+.|
T Consensus        13 s~~~~l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~lsng~~y~y   92 (219)
T PF07569_consen   13 SPVSFLECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLSNGDSYSY   92 (219)
T ss_pred             CceEEEEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEeCCCEEEe
Confidence            344556667788888888888888886654211          1       23456788888888883333456788888


Q ss_pred             ecCCC
Q psy7057         224 SANPD  228 (557)
Q Consensus       224 d~~~~  228 (557)
                      +.+-.
T Consensus        93 ~~~L~   97 (219)
T PF07569_consen   93 SPDLG   97 (219)
T ss_pred             ccccc
Confidence            87643

These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>KOG4441|consensus

Probab=86.46  E-value=13  Score=41.08  Aligned_cols=191  Identities=17%  Similarity=0.236  Sum_probs=93.4

Q ss_pred             EEEEECC------CcEEEEcCCC-----CCC-----------CCCCCEEEEEECC------CeEEEEECCCCeEE--EEE
Q psy7057          26 ILSASRD------KSAKLWKPND-----LSP-----------GAKVNTLLSASWD------MTAKLWCLESQQCK--LTI   75 (557)
Q Consensus        26 l~sgs~D------g~V~iWd~~~-----~~~-----------~~~~~~l~sgs~D------g~i~iwd~~~~~~~--~~l   75 (557)
                      ++.|+.+      ..+..+|..+     ++.           .-.+...++|+.|      .++..||..+.+-.  ..+
T Consensus       288 ~~vGG~~~~~~~~~~ve~yd~~~~~w~~~a~m~~~r~~~~~~~~~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~~~a~M  367 (571)
T KOG4441|consen  288 VAVGGYNRQGQSLRSVECYDPKTNEWSSLAPMPSPRCRVGVAVLNGKLYVVGGYDSGSDRLSSVERYDPRTNQWTPVAPM  367 (571)
T ss_pred             EEECCCCCCCcccceeEEecCCcCcEeecCCCCcccccccEEEECCEEEEEccccCCCcccceEEEecCCCCceeccCCc
Confidence            4566666      3577787766     110           1134567888888      34667777665411  112


Q ss_pred             cccCCcEEEEEEcCCCEEEEEECCCe-----EEEEeCCCcEEEEEeCCCCCEE--EEEEeCCCe-EEEEECCC------e
Q psy7057          76 RQHEMAVWGVIQLANGIIVTGCADKT-----IKLHSEEGEFLKTLTGHTDCVR--GLAVLNDTD-FVSCSNDA------S  141 (557)
Q Consensus        76 ~~h~~~V~~l~~~~~~~l~sgs~dg~-----I~vwd~~~~~~~~l~~h~~~V~--~l~~~~~~~-lvs~s~Dg------~  141 (557)
                      ...... .+++...+-+.+.|+.||.     +-.||.....-...........  +++.. +++ +++|+.++      +
T Consensus       368 ~~~R~~-~~v~~l~g~iYavGG~dg~~~l~svE~YDp~~~~W~~va~m~~~r~~~gv~~~-~g~iYi~GG~~~~~~~l~s  445 (571)
T KOG4441|consen  368 NTKRSD-FGVAVLDGKLYAVGGFDGEKSLNSVECYDPVTNKWTPVAPMLTRRSGHGVAVL-GGKLYIIGGGDGSSNCLNS  445 (571)
T ss_pred             cCcccc-ceeEEECCEEEEEeccccccccccEEEecCCCCcccccCCCCcceeeeEEEEE-CCEEEEEcCcCCCccccce
Confidence            111111 1222222338888998865     5556643332222211211222  22222 355 55777554      4


Q ss_pred             EEEEECCCCeE--EEEEeCCCCcEEEEEEcCCEEEEEeCCC-----eEEEEECCCC--ceEeeCCccEEE--EEEcCCCc
Q psy7057         142 IRVWDSTTGKC--VHTMYGHPNFIYSVAAHGDLITSGGEDQ-----CVCVYQNKAQ--NSFMIPAMSVWA--VAILPNSD  210 (557)
Q Consensus       142 I~vwd~~~~~~--~~~~~~h~~~V~~l~~~~~~l~s~s~Dg-----~I~iwd~~~~--~~~~~~~~~v~~--v~~~p~g~  210 (557)
                      +..||..+.+-  +..+..-.........++.+.+.||.|+     +|..||..+.  ..+.........  ++.. ++.
T Consensus       446 ve~YDP~t~~W~~~~~M~~~R~~~g~a~~~~~iYvvGG~~~~~~~~~VE~ydp~~~~W~~v~~m~~~rs~~g~~~~-~~~  524 (571)
T KOG4441|consen  446 VECYDPETNTWTLIAPMNTRRSGFGVAVLNGKIYVVGGFDGTSALSSVERYDPETNQWTMVAPMTSPRSAVGVVVL-GGK  524 (571)
T ss_pred             EEEEcCCCCceeecCCcccccccceEEEECCEEEEECCccCCCccceEEEEcCCCCceeEcccCccccccccEEEE-CCE
Confidence            66788766542  2223221222223333777888888776     3677886554  222212222222  2222 334


Q ss_pred             -EEEEEcCCc
Q psy7057         211 -IVTGSSDGI  219 (557)
Q Consensus       211 -l~sg~~Dg~  219 (557)
                       +++|+.||.
T Consensus       525 ly~vGG~~~~  534 (571)
T KOG4441|consen  525 LYAVGGFDGN  534 (571)
T ss_pred             EEEEecccCc
Confidence             778887764

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=86.43  E-value=42  Score=34.48  Aligned_cols=86  Identities=12%  Similarity=0.185  Sum_probs=43.2

Q ss_pred             EEEEe-CC-CeEE-EEECCCe--EEEEECCCCeEEEEEeCCCCcEEEEEE---cCC-EEEEEeCCC----eEEEEECC-C
Q psy7057         124 GLAVL-ND-TDFV-SCSNDAS--IRVWDSTTGKCVHTMYGHPNFIYSVAA---HGD-LITSGGEDQ----CVCVYQNK-A  189 (557)
Q Consensus       124 ~l~~~-~~-~~lv-s~s~Dg~--I~vwd~~~~~~~~~~~~h~~~V~~l~~---~~~-~l~s~s~Dg----~I~iwd~~-~  189 (557)
                      ...+. ++ +.|+ ....||.  |.+.+...+. ...+....-.|..+..   .++ .++++..+.    .|+.-++. .
T Consensus       239 ~~~~~~~~~~~~l~~s~~~G~~hly~~~~~~~~-~~~lT~G~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~v~~~~~  317 (353)
T PF00930_consen  239 PPHFLGPDGNEFLWISERDGYRHLYLYDLDGGK-PRQLTSGDWEVTSILGWDEDNNRIYFTANGDNPGERHLYRVSLDSG  317 (353)
T ss_dssp             EEEE-TTTSSEEEEEEETTSSEEEEEEETTSSE-EEESS-SSS-EEEEEEEECTSSEEEEEESSGGTTSBEEEEEETTET
T ss_pred             ccccccCCCCEEEEEEEcCCCcEEEEEcccccc-eeccccCceeecccceEcCCCCEEEEEecCCCCCceEEEEEEeCCC
Confidence            44444 44 4444 5557776  4455654444 4455544556655443   333 455666533    45555566 3


Q ss_pred             C--ceEeeCCccEEEEEEcCCCc
Q psy7057         190 Q--NSFMIPAMSVWAVAILPNSD  210 (557)
Q Consensus       190 ~--~~~~~~~~~v~~v~~~p~g~  210 (557)
                      .  +.+......-..+.|+|+++
T Consensus       318 ~~~~~LT~~~~~~~~~~~Spdg~  340 (353)
T PF00930_consen  318 GEPKCLTCEDGDHYSASFSPDGK  340 (353)
T ss_dssp             TEEEESSTTSSTTEEEEE-TTSS
T ss_pred             CCeEeccCCCCCceEEEECCCCC
Confidence            3  33333332236999999998

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain

Probab=86.29  E-value=13  Score=38.58  Aligned_cols=124  Identities=14%  Similarity=0.070  Sum_probs=64.5

Q ss_pred             ccEEEEEEcCCCcEEEEEC------------CC-cEEEEcCCC--------------------CCCCCCCCEEEEEECCC
Q psy7057          13 MDVRSLSVTPDGCILSASR------------DK-SAKLWKPND--------------------LSPGAKVNTLLSASWDM   59 (557)
Q Consensus        13 ~~V~~l~~spdg~l~sgs~------------Dg-~V~iWd~~~--------------------~~~~~~~~~l~sgs~Dg   59 (557)
                      .....|+|.++|+|+++..            .+ .|.+++-.+                    +.+.+++  |+.++...
T Consensus        14 ~~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~~G--lyV~~~~~   91 (367)
T TIGR02604        14 RNPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAVGG--VYVATPPD   91 (367)
T ss_pred             CCCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEecCC--EEEeCCCe
Confidence            4567899999999776642            23 666664321                    3444444  44444444


Q ss_pred             eEEEEECCCC-----e--EEE-EEcc----cCCcEEEEEEcCCC-EEEE-EECC------------------CeEEEEeC
Q psy7057          60 TAKLWCLESQ-----Q--CKL-TIRQ----HEMAVWGVIQLANG-IIVT-GCAD------------------KTIKLHSE  107 (557)
Q Consensus        60 ~i~iwd~~~~-----~--~~~-~l~~----h~~~V~~l~~~~~~-~l~s-gs~d------------------g~I~vwd~  107 (557)
                      ..++.+....     +  .+. .+..    +......+++.|+| +.++ |+..                  +.|.-++.
T Consensus        92 i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G~~~~~~~~~~~~~~~~~~~~~g~i~r~~p  171 (367)
T TIGR02604        92 ILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHGNTLASKVTRPGTSDESRQGLGGGLFRYNP  171 (367)
T ss_pred             EEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecccCCCceeccCCCccCcccccCceEEEEec
Confidence            3334444221     1  222 2222    13447789999998 3333 3211                  33444444


Q ss_pred             CCcEEEEEeCCCCCEEEEEEeCCCeEEEEEC
Q psy7057         108 EGEFLKTLTGHTDCVRGLAVLNDTDFVSCSN  138 (557)
Q Consensus       108 ~~~~~~~l~~h~~~V~~l~~~~~~~lvs~s~  138 (557)
                      .+..+..+...-.....++|++++.++++..
T Consensus       172 dg~~~e~~a~G~rnp~Gl~~d~~G~l~~tdn  202 (367)
T TIGR02604       172 DGGKLRVVAHGFQNPYGHSVDSWGDVFFCDN  202 (367)
T ss_pred             CCCeEEEEecCcCCCccceECCCCCEEEEcc
Confidence            4444433332234456788888877654443

All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.

>KOG3630|consensus

Probab=86.09  E-value=5.8  Score=45.78  Aligned_cols=137  Identities=16%  Similarity=0.070  Sum_probs=82.6

Q ss_pred             CEEEEEEeCCCe---EEEEECCCeEEEEECCCCeEE-----EEEeCC------CCcEEEEEEcCC---EEEEEeCCCeEE
Q psy7057         121 CVRGLAVLNDTD---FVSCSNDASIRVWDSTTGKCV-----HTMYGH------PNFIYSVAAHGD---LITSGGEDQCVC  183 (557)
Q Consensus       121 ~V~~l~~~~~~~---lvs~s~Dg~I~vwd~~~~~~~-----~~~~~h------~~~V~~l~~~~~---~l~s~s~Dg~I~  183 (557)
                      .+..+...++..   ++..+++-.|..+|+++....     .-|..|      .....++.|++.   ..+.+..|+.|+
T Consensus       102 pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl~  181 (1405)
T KOG3630|consen  102 PIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSLR  181 (1405)
T ss_pred             cceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccchh
Confidence            344444455544   335566667999998754221     112222      234456666443   577888999999


Q ss_pred             EEECCCC-ceE--eeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHhcc-cceeEEEeccCCCceeEE
Q psy7057         184 VYQNKAQ-NSF--MIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQY-AEEVKKLKSANEQEIGGV  257 (557)
Q Consensus       184 iwd~~~~-~~~--~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~-~~~v~~l~~~~~~~~~~v  257 (557)
                      +..+... ...  .......++++|+|.|+ ++.|-..|++.-|...-............ .+.+.++.|.......++
T Consensus       182 V~~~~~~~~~v~s~p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~leik~~ip~Pp~~e~yrvl~v~Wl~t~eflvv  260 (1405)
T KOG3630|consen  182 VKSTKQLAQNVTSFPVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPSLEIKSEIPEPPVEENYRVLSVTWLSTQEFLVV  260 (1405)
T ss_pred             hhhhhhhhhhhcccCcccceeeEEeccccceeeEecCCCeEEEeecccceeecccCCCcCCCcceeEEEEecceeEEEE
Confidence            9886544 111  12345689999999998 99999999998887554322211111112 356777777776665443

>KOG2247|consensus

Probab=86.09  E-value=0.63  Score=48.56  Aligned_cols=94  Identities=11%  Similarity=0.128  Sum_probs=73.6

Q ss_pred             ccEEEEEEcCCCc--EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEE
Q psy7057          13 MDVRSLSVTPDGC--ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLT   74 (557)
Q Consensus        13 ~~V~~l~~spdg~--l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~   74 (557)
                      +....++|..++.  ++.+-..+.+.+|++++                +.+++....++.+...+.++|++..+.+.+..
T Consensus        75 g~aldm~wDkegdvlavlAek~~piylwd~n~eytqqLE~gg~~s~sll~wsKg~~el~ig~~~gn~viynhgtsR~iiv  154 (615)
T KOG2247|consen   75 GKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYTQQLESGGTSSKSLLAWSKGTPELVIGNNAGNIVIYNHGTSRRIIV  154 (615)
T ss_pred             hhHhhhhhccccchhhhhhhcCCCeeechhhhhhHHHHhccCcchHHHHhhccCCccccccccccceEEEeccchhhhhh
Confidence            3445667777776  55778889999999987                56777788889999999999999887766666


Q ss_pred             EcccCCcEEEEEEcCCCEEEEEECCCeEEEEe
Q psy7057          75 IRQHEMAVWGVIQLANGIIVTGCADKTIKLHS  106 (557)
Q Consensus        75 l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd  106 (557)
                      .-.|..+++++++.+.++.+.++.|.++.+-.
T Consensus       155 ~Gkh~RRgtq~av~lEd~vil~dcd~~L~v~~  186 (615)
T KOG2247|consen  155 MGKHQRRGTQIAVTLEDYVILCDCDNTLSVTT  186 (615)
T ss_pred             hcccccceeEEEecccceeeecCcHHHHHHhh
Confidence            65599999999999999888877776554433

>PRK13684 Ycf48-like protein; Provisional

Probab=86.03  E-value=43  Score=34.21  Aligned_cols=147  Identities=10%  Similarity=0.022  Sum_probs=86.6

Q ss_pred             CCcEEEEEEcCCCEEEEEECCCeEEE-EeCCCcE-EEEEeCCCCCEEEEEEeCCCeEEEEECCCeEEEEECCCCeEEEEE
Q psy7057          79 EMAVWGVIQLANGIIVTGCADKTIKL-HSEEGEF-LKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTM  156 (557)
Q Consensus        79 ~~~V~~l~~~~~~~l~sgs~dg~I~v-wd~~~~~-~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~~~~~~  156 (557)
                      ...+.++.+.+++.++..+..|.+.. ++..++. ......-...++++.+.+++.++..+..|.+++=....+..-...
T Consensus       172 ~g~~~~i~~~~~g~~v~~g~~G~i~~s~~~gg~tW~~~~~~~~~~l~~i~~~~~g~~~~vg~~G~~~~~s~d~G~sW~~~  251 (334)
T PRK13684        172 AGVVRNLRRSPDGKYVAVSSRGNFYSTWEPGQTAWTPHQRNSSRRLQSMGFQPDGNLWMLARGGQIRFNDPDDLESWSKP  251 (334)
T ss_pred             cceEEEEEECCCCeEEEEeCCceEEEEcCCCCCeEEEeeCCCcccceeeeEcCCCCEEEEecCCEEEEccCCCCCccccc
Confidence            45678888999886666666676553 3323332 222233456789999999988776677787765333334322211


Q ss_pred             eC----CCCcEEEEEE-cCCEEEEEeCCCeEEEEE-CCCC-ceEe---eCCccEEEEEEcCCCcEEEEEcCCcEEEEec
Q psy7057         157 YG----HPNFIYSVAA-HGDLITSGGEDQCVCVYQ-NKAQ-NSFM---IPAMSVWAVAILPNSDIVTGSSDGIVRVFSA  225 (557)
Q Consensus       157 ~~----h~~~V~~l~~-~~~~l~s~s~Dg~I~iwd-~~~~-~~~~---~~~~~v~~v~~~p~g~l~sg~~Dg~I~iwd~  225 (557)
                      ..    ....+.++.+ ....++.++.+|.+..=. -... +...   ......+.+.+..++..+..+..|.|..|+-
T Consensus       252 ~~~~~~~~~~l~~v~~~~~~~~~~~G~~G~v~~S~d~G~tW~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~G~il~~~~  330 (334)
T PRK13684        252 IIPEITNGYGYLDLAYRTPGEIWAGGGNGTLLVSKDGGKTWEKDPVGEEVPSNFYKIVFLDPEKGFVLGQRGVLLRYVG  330 (334)
T ss_pred             cCCccccccceeeEEEcCCCCEEEEcCCCeEEEeCCCCCCCeECCcCCCCCcceEEEEEeCCCceEEECCCceEEEecC
Confidence            11    1234677777 333466677777665422 1111 2222   1223577888887777777888898887764

>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family

Probab=85.95  E-value=71  Score=36.63  Aligned_cols=67  Identities=9%  Similarity=0.023  Sum_probs=45.7

Q ss_pred             CCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEE-------------EEEEcC---CCEEEEEEC----------CCeE
Q psy7057          49 VNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVW-------------GVIQLA---NGIIVTGCA----------DKTI  102 (557)
Q Consensus        49 ~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~-------------~l~~~~---~~~l~sgs~----------dg~I  102 (557)
                      ...++.++.|+.+.-.|.++|+....+.. ...|.             .+.-.|   ++.++.|+.          +|.|
T Consensus       260 ~~rV~~~T~Dg~LiALDA~TGk~~W~fg~-~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I  338 (764)
T TIGR03074       260 ARRIILPTSDARLIALDADTGKLCEDFGN-NGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVI  338 (764)
T ss_pred             CCEEEEecCCCeEEEEECCCCCEEEEecC-CCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEE
Confidence            34788999999999999999998876642 11110             111122   566777754          6889


Q ss_pred             EEEe-CCCcEEEEEe
Q psy7057         103 KLHS-EEGEFLKTLT  116 (557)
Q Consensus       103 ~vwd-~~~~~~~~l~  116 (557)
                      +-+| .+|+.+..+.
T Consensus       339 ~A~Da~TGkl~W~~~  353 (764)
T TIGR03074       339 RAFDVNTGALVWAWD  353 (764)
T ss_pred             EEEECCCCcEeeEEe
Confidence            9999 6788776654

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.

>PHA03098 kelch-like protein; Provisional

Probab=85.88  E-value=27  Score=38.17  Aligned_cols=176  Identities=11%  Similarity=0.105  Sum_probs=76.5

Q ss_pred             CEEEEEECCC------eEEEEECCCCeEEEEEcc-c-CCcEEEEEEcCCCEEEEEECC-----CeEEEEeCCCcEEEEEe
Q psy7057          50 NTLLSASWDM------TAKLWCLESQQCKLTIRQ-H-EMAVWGVIQLANGIIVTGCAD-----KTIKLHSEEGEFLKTLT  116 (557)
Q Consensus        50 ~~l~sgs~Dg------~i~iwd~~~~~~~~~l~~-h-~~~V~~l~~~~~~~l~sgs~d-----g~I~vwd~~~~~~~~l~  116 (557)
                      ..++.|+.++      .+..||+.+.+-. .+.. . ...-.+++...+.+++.|+.+     ..+..||.....-....
T Consensus       296 ~lyv~GG~~~~~~~~~~v~~yd~~~~~W~-~~~~~~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~  374 (534)
T PHA03098        296 VIYFIGGMNKNNLSVNSVVSYDTKTKSWN-KVPELIYPRKNPGVTVFNNRIYVIGGIYNSISLNTVESWKPGESKWREEP  374 (534)
T ss_pred             EEEEECCCcCCCCeeccEEEEeCCCCeee-ECCCCCcccccceEEEECCEEEEEeCCCCCEecceEEEEcCCCCceeeCC
Confidence            3455555432      4667777665432 2211 1 111112222333366777765     23556774332211111


Q ss_pred             C--CCCCEEEEEEeCCCe-EEEEECC------CeEEEEECCCCeEE--EEEeCCCCcEEEEEEcCCEEEEEeCC------
Q psy7057         117 G--HTDCVRGLAVLNDTD-FVSCSND------ASIRVWDSTTGKCV--HTMYGHPNFIYSVAAHGDLITSGGED------  179 (557)
Q Consensus       117 ~--h~~~V~~l~~~~~~~-lvs~s~D------g~I~vwd~~~~~~~--~~~~~h~~~V~~l~~~~~~l~s~s~D------  179 (557)
                      .  +...-.+++.. ++. ++.|+.+      ..+..||+.+.+-.  ..+........++..++..++.|+.+      
T Consensus       375 ~lp~~r~~~~~~~~-~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~  453 (534)
T PHA03098        375 PLIFPRYNPCVVNV-NNLIYVIGGISKNDELLKTVECFSLNTNKWSKGSPLPISHYGGCAIYHDGKIYVIGGISYIDNIK  453 (534)
T ss_pred             CcCcCCccceEEEE-CCEEEEECCcCCCCcccceEEEEeCCCCeeeecCCCCccccCceEEEECCEEEEECCccCCCCCc
Confidence            1  11111122333 344 5566632      45788887765422  11111111122333366666666643      


Q ss_pred             --CeEEEEECCCC--ceEeeCCc--cEEEEEEcCCCc-EEEEEcC-----CcEEEEecCCC
Q psy7057         180 --QCVCVYQNKAQ--NSFMIPAM--SVWAVAILPNSD-IVTGSSD-----GIVRVFSANPD  228 (557)
Q Consensus       180 --g~I~iwd~~~~--~~~~~~~~--~v~~v~~~p~g~-l~sg~~D-----g~I~iwd~~~~  228 (557)
                        ..+.+||..+.  ..+.....  .-.+++.. ++. ++.||.+     +.+.+||..+.
T Consensus       454 ~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~  513 (534)
T PHA03098        454 VYNIVESYNPVTNKWTELSSLNFPRINASLCIF-NNKIYVVGGDKYEYYINEIEVYDDKTN  513 (534)
T ss_pred             ccceEEEecCCCCceeeCCCCCcccccceEEEE-CCEEEEEcCCcCCcccceeEEEeCCCC
Confidence              23788886654  22211110  11112222 555 5566553     45677776654

>KOG2280|consensus

Probab=85.60  E-value=34  Score=38.11  Aligned_cols=65  Identities=14%  Similarity=0.268  Sum_probs=48.6

Q ss_pred             EEEEcCCCEEEEEECCCeEEEEeCCCcEEEEEeCCCCCEEEEEEeCCCeEEEEECCCeEEEEECC
Q psy7057          84 GVIQLANGIIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDST  148 (557)
Q Consensus        84 ~l~~~~~~~l~sgs~dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~  148 (557)
                      ++..+|..+.-..+..-.|+|++.+|..+..+.-....+-.+.|+.+..|++...+|+++++++.
T Consensus        48 AV~r~p~~~~~~~~a~~~I~If~~sG~lL~~~~w~~~~lI~mgWs~~eeLI~v~k~g~v~Vy~~~  112 (829)
T KOG2280|consen   48 AVTRSPSKLVPLYSARPYIRIFNISGQLLGRILWKHGELIGMGWSDDEELICVQKDGTVHVYGLL  112 (829)
T ss_pred             EEEecccccccccccceeEEEEeccccchHHHHhcCCCeeeecccCCceEEEEeccceEEEeecc
Confidence            45555543211124556799999999988776644458889999999999999999999999975

>KOG1898|consensus

Probab=85.17  E-value=80  Score=36.76  Aligned_cols=169  Identities=17%  Similarity=0.172  Sum_probs=99.0

Q ss_pred             CCCeEEEEECCCCeEEEEEccc----CCcEEEEEEcCCC---EEEEEEC-----------CCeEEEEe--CCCcEEEEEe
Q psy7057          57 WDMTAKLWCLESQQCKLTIRQH----EMAVWGVIQLANG---IIVTGCA-----------DKTIKLHS--EEGEFLKTLT  116 (557)
Q Consensus        57 ~Dg~i~iwd~~~~~~~~~l~~h----~~~V~~l~~~~~~---~l~sgs~-----------dg~I~vwd--~~~~~~~~l~  116 (557)
                      +-..|++.|..+++.+..+...    .-.++++.|+...   .++.|+.           +|.++.|+  ..++.+.-+.
T Consensus       851 w~s~I~~~d~~s~~~~~~~~l~~ne~a~~v~~~~fs~~~~~~~~~v~~~~~~~l~~~~~~~g~~ytyk~~~~g~~lellh  930 (1205)
T KOG1898|consen  851 WVSSIRVFDPKSGKIICLVELGQNEAAFSVCAVDFSSSEYQPFVAVGVATTEQLDSKSISSGFVYTYKFVRNGDKLELLH  930 (1205)
T ss_pred             ccceEEEEcCCCCceEEEEeecCCcchhheeeeeeccCCCceEEEEEeeccccccccccCCCceEEEEEEecCceeeeee
Confidence            3345899998888766655422    2245666666533   2333321           23355555  3444333322


Q ss_pred             --CCCCCEEEEEEeCCCeEEEEECCCeEEEEECCCCeEEEEEe--CCCCcEEEEEEcCCEEEEEeCCCeEEEEE--CCCC
Q psy7057         117 --GHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMY--GHPNFIYSVAAHGDLITSGGEDQCVCVYQ--NKAQ  190 (557)
Q Consensus       117 --~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~~~~~~~--~h~~~V~~l~~~~~~l~s~s~Dg~I~iwd--~~~~  190 (557)
                        .-...|.+++  |-...+-++....+++||+...++++...  .-+..|..+.+.+..+++|...-.+.++.  ....
T Consensus       931 ~T~~~~~v~Ai~--~f~~~~LagvG~~l~~YdlG~K~lLRk~e~k~~p~~Is~iqt~~~RI~VgD~qeSV~~~~y~~~~n 1008 (1205)
T KOG1898|consen  931 KTEIPGPVGAIC--PFQGRVLAGVGRFLRLYDLGKKKLLRKCELKFIPNRISSIQTYGARIVVGDIQESVHFVRYRREDN 1008 (1205)
T ss_pred             ccCCCccceEEe--ccCCEEEEecccEEEEeeCChHHHHhhhhhccCceEEEEEeecceEEEEeeccceEEEEEEecCCC
Confidence              1224455444  44335555666899999998776655443  23678888888888899888777776655  3333


Q ss_pred             ceEeeCCc----cEEEEEEcCCCcEEEEEcCCcEEEEecCC
Q psy7057         191 NSFMIPAM----SVWAVAILPNSDIVTGSSDGIVRVFSANP  227 (557)
Q Consensus       191 ~~~~~~~~----~v~~v~~~p~g~l~sg~~Dg~I~iwd~~~  227 (557)
                      +.+..-.+    .|+++.+...+.++.+..=|.+.+-.+..
T Consensus      1009 ~l~~fadD~~pR~Vt~~~~lD~~tvagaDrfGNi~~vR~P~ 1049 (1205)
T KOG1898|consen 1009 QLIVFADDPVPRHVTALELLDYDTVAGADRFGNIAVVRIPP 1049 (1205)
T ss_pred             eEEEEeCCCccceeeEEEEecCCceeeccccCcEEEEECCC
Confidence            33332222    46666666666687777777777766543

>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []

Probab=84.41  E-value=24  Score=39.58  Aligned_cols=102  Identities=17%  Similarity=0.176  Sum_probs=63.5

Q ss_pred             cCCEEEEEeCCCeEEEEECCCC----------------------ceEeeCCccEEEEEEc--CCCc-EEEEEcCCcEEEE
Q psy7057         169 HGDLITSGGEDQCVCVYQNKAQ----------------------NSFMIPAMSVWAVAIL--PNSD-IVTGSSDGIVRVF  223 (557)
Q Consensus       169 ~~~~l~s~s~Dg~I~iwd~~~~----------------------~~~~~~~~~v~~v~~~--p~g~-l~sg~~Dg~I~iw  223 (557)
                      ..+.|+.|.+||.|.+|.++..                      .........+|.++++  ...+ ||++++...|.||
T Consensus       113 ~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~v~~SaWGLdIh~~~~~rlIAVSsNs~~VTVF  192 (717)
T PF08728_consen  113 GEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLRVGASAWGLDIHDYKKSRLIAVSSNSQEVTVF  192 (717)
T ss_pred             CeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEeecCCceeEEEEEecCcceEEEEecCCceEEEE
Confidence            4568999999999999963211                      0111123478999998  6666 6677777888888


Q ss_pred             ecCCCCcc-hhHHHhcccceeEEEeccCCC--c---eeEEEEeCCCcEEEEec
Q psy7057         224 SANPDRQA-EDAVQAQYAEEVKKLKSANEQ--E---IGGVKVSDDGIVRVFSA  270 (557)
Q Consensus       224 d~~~~~~~-~~~~~~~~~~~v~~l~~~~~~--~---~~~vs~s~DG~IrvW~~  270 (557)
                      -....... .......+...|-.+.+.+..  +   ..+++++-.|.+.+|++
T Consensus       193 af~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I  245 (717)
T PF08728_consen  193 AFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI  245 (717)
T ss_pred             EEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence            76542111 111111244455555554443  2   36678899999888777

RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].

>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]

Probab=84.37  E-value=15  Score=38.93  Aligned_cols=129  Identities=12%  Similarity=0.076  Sum_probs=69.1

Q ss_pred             EEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC--------EEEEEECCCeEEEEe--CCCcEEEEEe----CCC
Q psy7057          54 SASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG--------IIVTGCADKTIKLHS--EEGEFLKTLT----GHT  119 (557)
Q Consensus        54 sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~--------~l~sgs~dg~I~vwd--~~~~~~~~l~----~h~  119 (557)
                      .|.....+.--|++.|+.+-.+..|...  -+.|.|..        .-+.|-.+..|.-.|  ..|..+....    ...
T Consensus       485 dg~~~~kLykmDIErGkvveeW~~~ddv--vVqy~p~~kf~qmt~eqtlvGlS~~svFrIDPR~~gNKi~v~esKdY~tK  562 (776)
T COG5167         485 DGGERDKLYKMDIERGKVVEEWDLKDDV--VVQYNPYFKFQQMTDEQTLVGLSDYSVFRIDPRARGNKIKVVESKDYKTK  562 (776)
T ss_pred             cCCCcccceeeecccceeeeEeecCCcc--eeecCCchhHHhcCccceEEeecccceEEecccccCCceeeeeehhcccc
Confidence            3445556666778888888888877765  36666632        233444455554445  3443333221    112


Q ss_pred             CCEEEEEEeCCCeEEEEECCCeEEEEECCCCe-EEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEE
Q psy7057         120 DCVRGLAVLNDTDFVSCSNDASIRVWDSTTGK-CVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQ  186 (557)
Q Consensus       120 ~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~-~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd  186 (557)
                      ....|.....+|.++.+|..|-||+|| +-|. ....+.+-...|-.+..  +|+++++.|. ..+.+-|
T Consensus       563 n~Fss~~tTesGyIa~as~kGDirLyD-Rig~rAKtalP~lG~aIk~idvta~Gk~ilaTCk-~yllL~d  630 (776)
T COG5167         563 NKFSSGMTTESGYIAAASRKGDIRLYD-RIGKRAKTALPGLGDAIKHIDVTANGKHILATCK-NYLLLTD  630 (776)
T ss_pred             ccccccccccCceEEEecCCCceeeeh-hhcchhhhcCcccccceeeeEeecCCcEEEEeec-ceEEEEe
Confidence            233444444556677778878888887 3332 22233444555555555  5665544443 3444444

>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []

Probab=84.11  E-value=25  Score=39.39  Aligned_cols=97  Identities=13%  Similarity=0.222  Sum_probs=64.3

Q ss_pred             CEEEEEECCCeEEEEECCC-------C-------------eEEEEEcccCCcEEEEEEc--CCC-EEEEEECCCeEEEEe
Q psy7057          50 NTLLSASWDMTAKLWCLES-------Q-------------QCKLTIRQHEMAVWGVIQL--ANG-IIVTGCADKTIKLHS  106 (557)
Q Consensus        50 ~~l~sgs~Dg~i~iwd~~~-------~-------------~~~~~l~~h~~~V~~l~~~--~~~-~l~sgs~dg~I~vwd  106 (557)
                      ..|+.|..||.|.+|.+++       .             ++...+. -...+|++++.  ... +||.++....|.||-
T Consensus       115 EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~-v~~SaWGLdIh~~~~~rlIAVSsNs~~VTVFa  193 (717)
T PF08728_consen  115 EVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLR-VGASAWGLDIHDYKKSRLIAVSSNSQEVTVFA  193 (717)
T ss_pred             eEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEee-cCCceeEEEEEecCcceEEEEecCCceEEEEE
Confidence            5688899999999996521       0             0122222 34588999998  554 777777778888876


Q ss_pred             --CC-CcE-EEEEeCCCCCEEEEEEeCCC-------eEEEEECCCeEEEEEC
Q psy7057         107 --EE-GEF-LKTLTGHTDCVRGLAVLNDT-------DFVSCSNDASIRVWDS  147 (557)
Q Consensus       107 --~~-~~~-~~~l~~h~~~V~~l~~~~~~-------~lvs~s~Dg~I~vwd~  147 (557)
                        .. .+. ...-..|...|-+|+|.++.       .+++++-.|.+.+|++
T Consensus       194 f~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I  245 (717)
T PF08728_consen  194 FALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI  245 (717)
T ss_pred             EeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence              21 111 11112366789999997652       3568899999998887

RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=83.98  E-value=55  Score=33.65  Aligned_cols=203  Identities=9%  Similarity=-0.006  Sum_probs=95.7

Q ss_pred             CCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCCEEEEEECCCeEEEEeCCCcEEEEEeCCC------------------
Q psy7057          58 DMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKTLTGHT------------------  119 (557)
Q Consensus        58 Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~~~~~~~~l~~h~------------------  119 (557)
                      .+.+.|+|+++++...... ....+....|+|+|..++--.++.|.+++..+.....+....                  
T Consensus        22 ~~~y~i~d~~~~~~~~l~~-~~~~~~~~~~sP~g~~~~~v~~~nly~~~~~~~~~~~lT~dg~~~i~nG~~dwvyeEEv~  100 (353)
T PF00930_consen   22 KGDYYIYDIETGEITPLTP-PPPKLQDAKWSPDGKYIAFVRDNNLYLRDLATGQETQLTTDGEPGIYNGVPDWVYEEEVF  100 (353)
T ss_dssp             EEEEEEEETTTTEEEESS--EETTBSEEEE-SSSTEEEEEETTEEEEESSTTSEEEESES--TTTEEESB--HHHHHHTS
T ss_pred             ceeEEEEecCCCceEECcC-CccccccceeecCCCeeEEEecCceEEEECCCCCeEEeccccceeEEcCccceecccccc
Confidence            3568899999876443332 256778899999994444445789999985444443332111                  


Q ss_pred             CCEEEEEEeCCCe-EEEE-ECCCeEEEEECCCCeEEEEEeCCCC---cEEEEEE--cCCEEEEEeCCCeEEEEECCCCc-
Q psy7057         120 DCVRGLAVLNDTD-FVSC-SNDASIRVWDSTTGKCVHTMYGHPN---FIYSVAA--HGDLITSGGEDQCVCVYQNKAQN-  191 (557)
Q Consensus       120 ~~V~~l~~~~~~~-lvs~-s~Dg~I~vwd~~~~~~~~~~~~h~~---~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~~-  191 (557)
                      +.-.++.|+|+++ |+.. -.+..|+.+.+.      .......   .+..+.+  -|.-..    .-.+.++++.+.+ 
T Consensus       101 ~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~------~~~~~~~~yp~~~~~~YPk~G~~np----~v~l~v~~~~~~~~  170 (353)
T PF00930_consen  101 DRRSAVWWSPDSKYLAFLRFDEREVPEYPLP------DYSPPDSQYPEVESIRYPKAGDPNP----RVSLFVVDLASGKT  170 (353)
T ss_dssp             SSSBSEEE-TTSSEEEEEEEE-TTS-EEEEE------EESSSTESS-EEEEEE--BTTS-------EEEEEEEESSSTCC
T ss_pred             ccccceEECCCCCEEEEEEECCcCCceEEee------ccCCccccCCcccccccCCCCCcCC----ceEEEEEECCCCcE
Confidence            2235677899977 4432 233334333211      1111111   2333333  122111    1135556655442 


Q ss_pred             -eEee------CCccEEEEEEcCCCc-EEEEEc--CC---cEEEEecCCCCcch--hHHHhcccceeEEEecc-CCCcee
Q psy7057         192 -SFMI------PAMSVWAVAILPNSD-IVTGSS--DG---IVRVFSANPDRQAE--DAVQAQYAEEVKKLKSA-NEQEIG  255 (557)
Q Consensus       192 -~~~~------~~~~v~~v~~~p~g~-l~sg~~--Dg---~I~iwd~~~~~~~~--~~~~~~~~~~v~~l~~~-~~~~~~  255 (557)
                       .+..      ....+..+.|.+++. ++..-.  +.   .+.++|..++....  ......+........+. +.....
T Consensus       171 ~~~~~~~~~~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~~e~~~~Wv~~~~~~~~~~~~~~~~  250 (353)
T PF00930_consen  171 TELDPPNSLNPQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGETRVVLEETSDGWVDVYDPPHFLGPDGNEF  250 (353)
T ss_dssp             CEE---HHHHTSSEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTTCEEEEEEESSSSSSSSSEEEE-TTTSSEE
T ss_pred             EEeeeccccCCCccCcccceecCCCcEEEEEEcccCCCEEEEEEEECCCCceeEEEEecCCcceeeecccccccCCCCEE
Confidence             2222      234688999999988 554332  22   35556665543321  11122222222223332 333333


Q ss_pred             EEEEeCCCcEEEEecC
Q psy7057         256 GVKVSDDGIVRVFSAN  271 (557)
Q Consensus       256 ~vs~s~DG~IrvW~~~  271 (557)
                      +.....||--+|+-++
T Consensus       251 l~~s~~~G~~hly~~~  266 (353)
T PF00930_consen  251 LWISERDGYRHLYLYD  266 (353)
T ss_dssp             EEEEETTSSEEEEEEE
T ss_pred             EEEEEcCCCcEEEEEc
Confidence            4334477766666544

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>PF08801 Nucleoporin_N: Nup133 N terminal like; InterPro: IPR014908 Nucleoporins are the main components of the nuclear pore complex (NPC) in eukaryotic cells, and mediate bidirectional nucleocytoplasmic transport, especially of mRNA and proteins

Probab=83.49  E-value=30  Score=36.62  Aligned_cols=29  Identities=31%  Similarity=0.520  Sum_probs=22.6

Q ss_pred             cEEEEEEcCCCc-EEEEEcCCcEEEEecCC
Q psy7057         199 SVWAVAILPNSD-IVTGSSDGIVRVFSANP  227 (557)
Q Consensus       199 ~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~  227 (557)
                      .|.+++..+..+ +++..++|.|.+|++..
T Consensus       191 ~I~~v~~d~~r~~ly~l~~~~~Iq~w~l~~  220 (422)
T PF08801_consen  191 KIVQVAVDPSRRLLYTLTSDGSIQVWDLGP  220 (422)
T ss_dssp             -EEEEEEETTTTEEEEEESSE-EEEEEE-S
T ss_pred             ceeeEEecCCcCEEEEEeCCCcEEEEEEeC
Confidence            488888877766 88999999999999974

RNA undergoing nuclear export first encounters the basket of the nuclear pore and many nucleoporins are accessible on the basket side of the pore [, ]. This entry represents the N-terminal of Nucleoprotein which forms a seven-bladed beta propeller structure []. ; PDB: 1XKS_A.

>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs

Probab=83.16  E-value=22  Score=40.26  Aligned_cols=29  Identities=24%  Similarity=0.331  Sum_probs=17.6

Q ss_pred             cEEEEEEcCCC---c-EEEEEcCCcEEEEecCC
Q psy7057         199 SVWAVAILPNS---D-IVTGSSDGIVRVFSANP  227 (557)
Q Consensus       199 ~v~~v~~~p~g---~-l~sg~~Dg~I~iwd~~~  227 (557)
                      .|..+.|+|.+   . |++-.+|+++|+||+..
T Consensus       148 ~i~qv~WhP~s~~~~~l~vLtsdn~lR~y~~~~  180 (717)
T PF10168_consen  148 EIKQVRWHPWSESDSHLVVLTSDNTLRLYDISD  180 (717)
T ss_pred             eEEEEEEcCCCCCCCeEEEEecCCEEEEEecCC
Confidence            45566666653   1 66666666666666643

It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].

>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]

Probab=83.10  E-value=4  Score=42.40  Aligned_cols=206  Identities=11%  Similarity=0.084  Sum_probs=114.9

Q ss_pred             EEEEECCCcEEEEcCCC-----------------CCCCCCC--------CEEEEEECCCeEEEEECCCC-----------
Q psy7057          26 ILSASRDKSAKLWKPND-----------------LSPGAKV--------NTLLSASWDMTAKLWCLESQ-----------   69 (557)
Q Consensus        26 l~sgs~Dg~V~iWd~~~-----------------~~~~~~~--------~~l~sgs~Dg~i~iwd~~~~-----------   69 (557)
                      ++.|..+|.+.+....-                 +..++.+        ...+..+.+....+++....           
T Consensus       130 ~alglsngqv~v~qp~~s~t~p~pg~~Fp~g~~p~aLd~qgr~leh~~~~lalA~~~~~qf~~~~~t~~~~~L~g~~t~q  209 (733)
T COG4590         130 FALGLSNGQVAVVQPQLSHTMPTPGREFPPGLEPLALDEQGRLLEHPLQQLALALTAEAQFATYDNTQQIQILRGDRTTQ  209 (733)
T ss_pred             EEEeccCCeEEEEeccccccCCCCCccCCCCCCccccCcccCcccchHHHhhhccchhhHHHHhhhhhhhhhhhcccCch
Confidence            77888999998875432                 1111122        23344445544444443221           


Q ss_pred             -eEEEEEcccCCcEEEEEEcCCCEEEEEECCCeEEEEeCCCcEE--EEEe-CCCC----CEE-EEEEeCCCe-EEEEECC
Q psy7057          70 -QCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFL--KTLT-GHTD----CVR-GLAVLNDTD-FVSCSND  139 (557)
Q Consensus        70 -~~~~~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~~~~~~--~~l~-~h~~----~V~-~l~~~~~~~-lvs~s~D  139 (557)
                       +.+..+......|..+...|++..+---...++.+++...+..  +++. ...+    .|+ ++.....+. ++.++.|
T Consensus       210 ~e~i~~L~~~~~~v~qllL~Pdg~~LYv~~g~~~~v~~L~~r~l~~rkl~~dspg~~~~~Vte~l~lL~Gg~SLLv~~~d  289 (733)
T COG4590         210 QEIIRLLSVPFSDVSQLLLTPDGKTLYVRTGSELVVALLDKRSLQIRKLVDDSPGDSRHQVTEQLYLLSGGFSLLVVHED  289 (733)
T ss_pred             hhhhhhcCCCccchHhhEECCCCCEEEEecCCeEEEEeecccccchhhhhhcCCCchHHHHHHHHHHHhCceeEEEEcCC
Confidence             2222344445567777788888222222226777777433322  1221 1111    122 112122333 7889999


Q ss_pred             CeEEEE-ECCCC-e----EEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCCc--eEeeCCccEEEEEEcCCC
Q psy7057         140 ASIRVW-DSTTG-K----CVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQN--SFMIPAMSVWAVAILPNS  209 (557)
Q Consensus       140 g~I~vw-d~~~~-~----~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~~--~~~~~~~~v~~v~~~p~g  209 (557)
                      |.|.-| |++.+ .    .++.++-....+..+..  +.+.+++-+..|++..+.....+  ........+.-++++|++
T Consensus       290 G~vsQWFdvr~~~~p~l~h~R~f~l~pa~~~~l~pe~~rkgF~~l~~~G~L~~f~st~~~~lL~~~~~~~~~~~~~Sp~~  369 (733)
T COG4590         290 GLVSQWFDVRRDGQPHLNHIRNFKLAPAEVQFLLPETNRKGFYSLYRNGTLQSFYSTSEKLLLFERAYQAPQLVAMSPNQ  369 (733)
T ss_pred             CceeeeeeeecCCCCcceeeeccccCcccceeeccccccceEEEEcCCCceeeeecccCcceehhhhhcCcceeeeCccc
Confidence            999877 54432 2    23334434456666666  33468888999999888744332  222223366778999999


Q ss_pred             cEEEEEcCCcEEEEecCCCCcc
Q psy7057         210 DIVTGSSDGIVRVFSANPDRQA  231 (557)
Q Consensus       210 ~l~sg~~Dg~I~iwd~~~~~~~  231 (557)
                      ..+..-..|.|+++.+++..+.
T Consensus       370 ~~Ll~e~~gki~~~~l~Nr~Pe  391 (733)
T COG4590         370 AYLLSEDQGKIRLAQLENRNPE  391 (733)
T ss_pred             chheeecCCceEEEEecCCCCC
Confidence            8555667788999999876543

>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]

Probab=82.75  E-value=19  Score=38.16  Aligned_cols=133  Identities=11%  Similarity=0.088  Sum_probs=81.0

Q ss_pred             EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCC--------eEEEEECCCeEEEEECCC-CeEEEEE--eC-
Q psy7057          92 IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDT--------DFVSCSNDASIRVWDSTT-GKCVHTM--YG-  158 (557)
Q Consensus        92 ~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~--------~lvs~s~Dg~I~vwd~~~-~~~~~~~--~~-  158 (557)
                      ++..|.....++-.| ..|+.+.....|.+.  -+.+.|..        +-+.|-.+..|.-.|.+- |..+..-  +. 
T Consensus       482 i~~dg~~~~kLykmDIErGkvveeW~~~ddv--vVqy~p~~kf~qmt~eqtlvGlS~~svFrIDPR~~gNKi~v~esKdY  559 (776)
T COG5167         482 IYLDGGERDKLYKMDIERGKVVEEWDLKDDV--VVQYNPYFKFQQMTDEQTLVGLSDYSVFRIDPRARGNKIKVVESKDY  559 (776)
T ss_pred             EEecCCCcccceeeecccceeeeEeecCCcc--eeecCCchhHHhcCccceEEeecccceEEecccccCCceeeeeehhc
Confidence            344455555555555 456777777766654  45565542        223444555666666653 3222211  11 


Q ss_pred             -CCCcEEEEE-EcCCEEEEEeCCCeEEEEE-CCC--CceEeeCCccEEEEEEcCCCcEEEEEcCCcEEEEecC
Q psy7057         159 -HPNFIYSVA-AHGDLITSGGEDQCVCVYQ-NKA--QNSFMIPAMSVWAVAILPNSDIVTGSSDGIVRVFSAN  226 (557)
Q Consensus       159 -h~~~V~~l~-~~~~~l~s~s~Dg~I~iwd-~~~--~~~~~~~~~~v~~v~~~p~g~l~sg~~Dg~I~iwd~~  226 (557)
                       ......|.. -...+++++|..|-||+|| ++.  ...++.....|..+..+.+|+.+.+.....+.+-|+.
T Consensus       560 ~tKn~Fss~~tTesGyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~idvta~Gk~ilaTCk~yllL~d~~  632 (776)
T COG5167         560 KTKNKFSSGMTTESGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVTANGKHILATCKNYLLLTDVP  632 (776)
T ss_pred             cccccccccccccCceEEEecCCCceeeehhhcchhhhcCcccccceeeeEeecCCcEEEEeecceEEEEecc
Confidence             111222222 2566899999999999999 332  2666777889999999999996656666778888765

>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation

Probab=81.97  E-value=53  Score=32.05  Aligned_cols=122  Identities=14%  Similarity=0.072  Sum_probs=71.2

Q ss_pred             cEEEEEEcCCCc-EEEEE---CCCcEEEEcCCC-------------CCCCCCCCEEEEEECCCeEEEEE-CCCCeEE-EE
Q psy7057          14 DVRSLSVTPDGC-ILSAS---RDKSAKLWKPND-------------LSPGAKVNTLLSASWDMTAKLWC-LESQQCK-LT   74 (557)
Q Consensus        14 ~V~~l~~spdg~-l~sgs---~Dg~V~iWd~~~-------------~~~~~~~~~l~sgs~Dg~i~iwd-~~~~~~~-~~   74 (557)
                      .+.+.++++++. ++...   ....+.++....             .++++++...+....+...+++. ..++... ..
T Consensus        25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~~~~~~~~g~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~~~~~  104 (253)
T PF10647_consen   25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGGPVRPVLTGGSLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTGEPVE  104 (253)
T ss_pred             cccceEECCCCCeEEEEEEcCCCCEEEEEcCCCcceeeccCCccccccccCCCCEEEEEcCCCceEEEEecCCCcceeEE
Confidence            688899999997 54433   334455554433             56667766666666666666663 2333221 11


Q ss_pred             Eccc--CCcEEEEEEcCCC-EEEEEE---CCCeEEEEe----CCC------cEEEEEeCCCCCEEEEEEeCCCeEEE
Q psy7057          75 IRQH--EMAVWGVIQLANG-IIVTGC---ADKTIKLHS----EEG------EFLKTLTGHTDCVRGLAVLNDTDFVS  135 (557)
Q Consensus        75 l~~h--~~~V~~l~~~~~~-~l~sgs---~dg~I~vwd----~~~------~~~~~l~~h~~~V~~l~~~~~~~lvs  135 (557)
                      +...  ...|..+.++|+| .++.-.   .++.|.+=-    ..+      .++.........+.++.|.+++.|+.
T Consensus       105 v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~~~L~V  181 (253)
T PF10647_consen  105 VDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWSDDSTLVV  181 (253)
T ss_pred             ecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCcceeeeecCCCEEEE
Confidence            2111  1289999999999 433333   356666543    233      11222223456899999999988663

It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.

>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain

Probab=81.89  E-value=47  Score=34.39  Aligned_cols=67  Identities=15%  Similarity=0.111  Sum_probs=38.8

Q ss_pred             CcEEEEEEcCCCEEEEEEC------------CC-eEEEEe-C--CCcE--EEEEeCCCCCEEEEEEeCCCeEEEEECCCe
Q psy7057          80 MAVWGVIQLANGIIVTGCA------------DK-TIKLHS-E--EGEF--LKTLTGHTDCVRGLAVLNDTDFVSCSNDAS  141 (557)
Q Consensus        80 ~~V~~l~~~~~~~l~sgs~------------dg-~I~vwd-~--~~~~--~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~  141 (557)
                      .....|+|.++|.|.++..            .+ .|.+++ .  +|..  ...+...-...+.|++.+++ ++.++....
T Consensus        14 ~~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~~G-lyV~~~~~i   92 (367)
T TIGR02604        14 RNPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAVGG-VYVATPPDI   92 (367)
T ss_pred             CCCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEecCC-EEEeCCCeE
Confidence            3455788888885555532            23 676665 2  3332  23443334456889998888 555555544


Q ss_pred             EEEEEC
Q psy7057         142 IRVWDS  147 (557)
Q Consensus       142 I~vwd~  147 (557)
                      .++.|.
T Consensus        93 ~~~~d~   98 (367)
T TIGR02604        93 LFLRDK   98 (367)
T ss_pred             EEEeCC
Confidence            445454

All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.

>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A

Probab=81.57  E-value=62  Score=32.56  Aligned_cols=183  Identities=13%  Similarity=0.206  Sum_probs=86.8

Q ss_pred             EEEEEcCCCEEEEEECCCeEEEEeCCCcE-EEEEeCCCCCEEEEEEeCCCeEEEEECCCeE-EEEECCCCeEEEEEeCCC
Q psy7057          83 WGVIQLANGIIVTGCADKTIKLHSEEGEF-LKTLTGHTDCVRGLAVLNDTDFVSCSNDASI-RVWDSTTGKCVHTMYGHP  160 (557)
Q Consensus        83 ~~l~~~~~~~l~sgs~dg~I~vwd~~~~~-~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~I-~vwd~~~~~~~~~~~~h~  160 (557)
                      ..+....++.....+..|.|..=.-.|.. ......-...+..+..++++.+++.+..|.+ .-||--...-...-..-.
T Consensus       107 ~~i~~l~~~~~~l~~~~G~iy~T~DgG~tW~~~~~~~~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w~~~~r~~~  186 (302)
T PF14870_consen  107 FGITALGDGSAELAGDRGAIYRTTDGGKTWQAVVSETSGSINDITRSSDGRYVAVSSRGNFYSSWDPGQTTWQPHNRNSS  186 (302)
T ss_dssp             EEEEEEETTEEEEEETT--EEEESSTTSSEEEEE-S----EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-EEEE--SS
T ss_pred             eEEEEcCCCcEEEEcCCCcEEEeCCCCCCeeEcccCCcceeEeEEECCCCcEEEEECcccEEEEecCCCccceEEccCcc
Confidence            34444444544444555655543322222 2223445577888888999998877777765 567743211222222356


Q ss_pred             CcEEEEEEcC-CEEEEEeCCCeEEEEEC-CCCceEee-------CCccEEEEEEcCCCcEEEEEcCCcEEEEecCCCCcc
Q psy7057         161 NFIYSVAAHG-DLITSGGEDQCVCVYQN-KAQNSFMI-------PAMSVWAVAILPNSDIVTGSSDGIVRVFSANPDRQA  231 (557)
Q Consensus       161 ~~V~~l~~~~-~~l~s~s~Dg~I~iwd~-~~~~~~~~-------~~~~v~~v~~~p~g~l~sg~~Dg~I~iwd~~~~~~~  231 (557)
                      ..|.+|.|.+ ..|......|.|++=+. ........       ....+..+++.+++.+.+++..|.+.+ +.+.++.=
T Consensus       187 ~riq~~gf~~~~~lw~~~~Gg~~~~s~~~~~~~~w~~~~~~~~~~~~~~ld~a~~~~~~~wa~gg~G~l~~-S~DgGktW  265 (302)
T PF14870_consen  187 RRIQSMGFSPDGNLWMLARGGQIQFSDDPDDGETWSEPIIPIKTNGYGILDLAYRPPNEIWAVGGSGTLLV-STDGGKTW  265 (302)
T ss_dssp             S-EEEEEE-TTS-EEEEETTTEEEEEE-TTEEEEE---B-TTSS--S-EEEEEESSSS-EEEEESTT-EEE-ESSTTSS-
T ss_pred             ceehhceecCCCCEEEEeCCcEEEEccCCCCccccccccCCcccCceeeEEEEecCCCCEEEEeCCccEEE-eCCCCccc
Confidence            8899999932 23444558888888772 22222222       122478999999988777777776654 33333221


Q ss_pred             -hhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEE
Q psy7057         232 -EDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVF  268 (557)
Q Consensus       232 -~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW  268 (557)
                       ...........+..+.+.+.+  .....+.||.|.-|
T Consensus       266 ~~~~~~~~~~~n~~~i~f~~~~--~gf~lG~~G~ll~~  301 (302)
T PF14870_consen  266 QKDRVGENVPSNLYRIVFVNPD--KGFVLGQDGVLLRY  301 (302)
T ss_dssp             EE-GGGTTSSS---EEEEEETT--EEEEE-STTEEEEE
T ss_pred             eECccccCCCCceEEEEEcCCC--ceEEECCCcEEEEe
Confidence             122222334445556555442  34666788887665

>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal

Probab=81.54  E-value=35  Score=29.71  Aligned_cols=75  Identities=11%  Similarity=0.098  Sum_probs=44.1

Q ss_pred             CCcEEEEEEcC----C-C-EEEEEECCCeEEEEeCCCcEEEEEeCCCCCEEEEEEeC----CCeEEEEECCCeEEEEECC
Q psy7057          79 EMAVWGVIQLA----N-G-IIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLN----DTDFVSCSNDASIRVWDST  148 (557)
Q Consensus        79 ~~~V~~l~~~~----~-~-~l~sgs~dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~----~~~lvs~s~Dg~I~vwd~~  148 (557)
                      ...|++++-.+    + . .|+.|+ ...+..||.....-..++.-.+.|.++.+-.    ...++..+.+..|.-+|..
T Consensus        47 n~~italaaG~l~~~~~~D~LliGt-~t~llaYDV~~N~d~Fyke~~DGvn~i~~g~~~~~~~~l~ivGGncsi~Gfd~~  125 (136)
T PF14781_consen   47 NQEITALAAGRLKPDDGRDCLLIGT-QTSLLAYDVENNSDLFYKEVPDGVNAIVIGKLGDIPSPLVIVGGNCSIQGFDYE  125 (136)
T ss_pred             CCceEEEEEEecCCCCCcCEEEEec-cceEEEEEcccCchhhhhhCccceeEEEEEecCCCCCcEEEECceEEEEEeCCC
Confidence            44566665433    2 2 555554 5678889965554444455567788887732    2336666666778888855


Q ss_pred             CCeEEE
Q psy7057         149 TGKCVH  154 (557)
Q Consensus       149 ~~~~~~  154 (557)
                      ..+...
T Consensus       126 G~e~fW  131 (136)
T PF14781_consen  126 GNEIFW  131 (136)
T ss_pred             CcEEEE
Confidence            444433

>PHA02790 Kelch-like protein; Provisional

Probab=80.35  E-value=76  Score=34.25  Aligned_cols=135  Identities=10%  Similarity=0.085  Sum_probs=60.6

Q ss_pred             CEEEEEECC-----CeEEEEECCCCeEEE--EEcccCCcEEEEEEcCCC-EEEEEECC--CeEEEEeCCCcEEEEEeCC-
Q psy7057          50 NTLLSASWD-----MTAKLWCLESQQCKL--TIRQHEMAVWGVIQLANG-IIVTGCAD--KTIKLHSEEGEFLKTLTGH-  118 (557)
Q Consensus        50 ~~l~sgs~D-----g~i~iwd~~~~~~~~--~l~~h~~~V~~l~~~~~~-~l~sgs~d--g~I~vwd~~~~~~~~l~~h-  118 (557)
                      ..+++|+.+     .++..||+.+.+-..  .+....... +++.. ++ ..+.|+.+  ..+..||.....-..+..- 
T Consensus       273 ~lyviGG~~~~~~~~~v~~Ydp~~~~W~~~~~m~~~r~~~-~~v~~-~~~iYviGG~~~~~sve~ydp~~n~W~~~~~l~  350 (480)
T PHA02790        273 VVYLIGGWMNNEIHNNAIAVNYISNNWIPIPPMNSPRLYA-SGVPA-NNKLYVVGGLPNPTSVERWFHGDAAWVNMPSLL  350 (480)
T ss_pred             EEEEEcCCCCCCcCCeEEEEECCCCEEEECCCCCchhhcc-eEEEE-CCEEEEECCcCCCCceEEEECCCCeEEECCCCC
Confidence            345666644     246678877654222  121111111 22222 45 66677654  3466777432222221111 


Q ss_pred             -CCCEEEEEEeCCCe-EEEEECCC---eEEEEECCCCeEEE--EEeCCCCcEEEEEEcCCEEEEEeCCCeEEEEECCCC
Q psy7057         119 -TDCVRGLAVLNDTD-FVSCSNDA---SIRVWDSTTGKCVH--TMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQ  190 (557)
Q Consensus       119 -~~~V~~l~~~~~~~-lvs~s~Dg---~I~vwd~~~~~~~~--~~~~h~~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~~  190 (557)
                       ...-.+++.. +++ ++.|+.++   ++..||.++.+-..  .+.........++.++...+.|+   .+.+||..+.
T Consensus       351 ~~r~~~~~~~~-~g~IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~~~r~~~~~~~~~~~IYv~GG---~~e~ydp~~~  425 (480)
T PHA02790        351 KPRCNPAVASI-NNVIYVIGGHSETDTTTEYLLPNHDQWQFGPSTYYPHYKSCALVFGRRLFLVGR---NAEFYCESSN  425 (480)
T ss_pred             CCCcccEEEEE-CCEEEEecCcCCCCccEEEEeCCCCEEEeCCCCCCccccceEEEECCEEEEECC---ceEEecCCCC
Confidence             1111122333 455 56776553   46678876543221  11111111222334666666663   4677886554

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	557
3odt_A	313	Crystal Structure Of Wd40 Beta Propeller Domain Of		7e-28
2ymu_A	577	Structure Of A Highly Repetitive Propeller Structur		2e-25
2ymu_A	577	Structure Of A Highly Repetitive Propeller Structur		5e-23
2ymu_A	577	Structure Of A Highly Repetitive Propeller Structur		4e-12
3psp_A	425	Crystal Structure Of Pul And Pfu Domain Length = 42		3e-21
3psp_A	425	Crystal Structure Of Pul And Pfu Domain Length = 42		2e-09
3psp_A	425	Crystal Structure Of Pul And Pfu Domain Length = 42		4e-09
3pst_A	425	Crystal Structure Of Pul And Pfu(Mutate) Domain Len		1e-20
3pst_A	425	Crystal Structure Of Pul And Pfu(Mutate) Domain Len		2e-09
3pst_A	425	Crystal Structure Of Pul And Pfu(Mutate) Domain Len		2e-08
2k89_A	80	Solution Structure Of A Novel Ubiquitin-Binding Dom		8e-20
2k89_A	80	Solution Structure Of A Novel Ubiquitin-Binding Dom		1e-10
2ovp_B	445	Structure Of The Skp1-Fbw7 Complex Length = 445		9e-18
3l3f_X	362	Crystal Structure Of A Pfu-Pul Domain Pair Of Sacch		1e-17
3l3f_X	362	Crystal Structure Of A Pfu-Pul Domain Pair Of Sacch		4e-09
1trj_A	314	Homology Model Of Yeast Rack1 Protein Fitted Into 1		6e-15
3rfg_A	319	Crystal Structure Of The Yeast Rack1 Dimer In Space		7e-15
3rfh_A	319	Crystal Structure Of The Yeast Rack1 Dimer In Space		7e-15
3izb_a	319	Localization Of The Small Subunit Ribosomal Protein		8e-15
3jyv_R	313	Structure Of The 40s Rrna And Proteins And PE TRNA		8e-15
3frx_A	319	Crystal Structure Of The Yeast Orthologue Of Rack1,		1e-14
3n0d_A	315	Crystal Structure Of Wdr5 Mutant (W330f) Length = 3		5e-14
2xl2_A	334	Wdr5 In Complex With An Rbbp5 Peptide Recruited To		6e-14
2gnq_A	336	Structure Of Wdr5 Length = 336		6e-14
3emh_A	318	Structural Basis Of Wdr5-Mll Interaction Length = 3		1e-13
2h9l_A	329	Wdr5delta23 Length = 329		1e-13
4a7j_A	318	Symmetric Dimethylation Of H3 Arginine 2 Is A Novel		1e-13
2h13_A	317	Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length		1e-13
3n0e_A	315	Crystal Structure Of Wdr5 Mutant (W330y) Length = 3		1e-13
3mxx_A	315	Crystal Structure Of Wdr5 Mutant (S62a) Length = 31		1e-13
2h68_A	312	Histone H3 Recognition And Presentation By The Wdr5		1e-13
2h9m_A	313	Wdr5 In Complex With Unmodified H3k4 Peptide Length		1e-13
3smr_A	312	Crystal Structure Of Human Wd Repeat Domain 5 With		1e-13
3psl_A	318	Fine-Tuning The Stimulation Of Mll1 Methyltransfera		1e-13
2g99_A	308	Structural Basis For The Specific Recognition Of Me		1e-13
3zey_7	318	High-resolution Cryo-electron Microscopy Structure		2e-13
2g9a_A	311	Structural Basis For The Specific Recognition Of Me		2e-13
2co0_A	315	Wdr5 And Unmodified Histone H3 Complex At 2.25 Angs		5e-13
2cnx_A	315	Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.		5e-13
1vyh_C	410	Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410		7e-13
1vyh_C	410	Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410		2e-12
3dm0_A	694	Maltose Binding Protein Fusion With Rack1 From A. T		3e-12
1p22_A	435	Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex		4e-09
4aow_A	340	Crystal Structure Of The Human Rack1 Protein At A R		8e-09
4aow_A	340	Crystal Structure Of The Human Rack1 Protein At A R		2e-05
2zkq_a	317	Structure Of A Mammalian Ribosomal 40s Subunit With		9e-09
2zkq_a	317	Structure Of A Mammalian Ribosomal 40s Subunit With		2e-05
3shf_A	1256	Crystal Structure Of The R265s Mutant Of Full-Lengt		2e-08
1nex_B	464	Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Comp		2e-08
3iza_B	1263	Structure Of An Apoptosome-Procaspase-9 Card Comple		2e-08
3sfz_A	1249	Crystal Structure Of Full-Length Murine Apaf-1 Leng		2e-08
3mks_B	464	Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH		2e-08
3mkq_A	814	Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subco		2e-07
2ynp_A	604	Yeast Betaprime Cop 1-604 With Ktktn Motif Length =		3e-07
2yno_A	310	Yeast Betaprime Cop 1-304h6 Length = 310		3e-07
2ynn_A	304	Yeast Betaprime Cop 1-304 With Ktktn Motif Length =		3e-07
3fm0_A	345	Crystal Structure Of Wd40 Protein Ciao1 Length = 34		6e-07
2xzm_R	343	Crystal Structure Of The Eukaryotic 40s Ribosomal S		1e-06
1erj_A	393	Crystal Structure Of The C-Terminal Wd40 Domain Of		8e-06
1erj_A	393	Crystal Structure Of The C-Terminal Wd40 Domain Of		2e-05
2pbi_B	354	The Multifunctional Nature Of Gbeta5RGS9 REVEALED F		3e-05
3ow8_A	321	Crystal Structure Of The Wd Repeat-Containing Prote		3e-05
1pi6_A	615	Yeast Actin Interacting Protein 1 (Aip1), Orthorhom		2e-04
1pgu_A	615	Yeast Actin Interacting Protein 1 (aip1), Se-met Pr		2e-04
2pm6_B	297	Crystal Structure Of Yeast Sec1331 EDGE ELEMENT OF		7e-04

>pdb|3ODT|A Chain A, Crystal Structure Of Wd40 Beta Propeller Domain Of Doa1 Length = 313

Iteration: 1
 Score =  122 bits (305), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 73/196 (37%), Positives = 114/196 (58%), Gaps = 13/196 (6%)
Query: 52  LLSASWDMTAKLWCLESQQCKLTIRQHEMAVWG--VIQLANGIIVTGCADKTIKLHSEEG 109
           ++S SWD TAK+W  +       ++ H  +VW   V+  +    +T  ADKTIKL   + 
Sbjct: 117 VISGSWDKTAKVW--KEGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQND- 173
Query: 110 EFLKTLTG-HTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA 168
           + +KT +G H D VR LAV++D  F+SCSND  I++ D  TG  + T  GH +F+Y +  
Sbjct: 174 KVIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDXHTGDVLRTYEGHESFVYCIKL 233
Query: 169 --HGDLITSGGEDQCVCVYQNK---AQNSFMIPAMSVWAVAILPNSDIVTGSSDGIVRVF 223
             +GD++ S GED+ V ++  +    +    +PA+S+W+V    N DI+ GSSD +VR+F
Sbjct: 234 LPNGDIV-SCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCXSNGDIIVGSSDNLVRIF 292
Query: 224 SANPDRQA-EDAVQAQ 238
           S    R A ED ++ +
Sbjct: 293 SQEKSRWASEDEIKGE 308

>pdb|2YMU|A Chain A, Structure Of A Highly Repetitive Propeller Structure Length = 577

Iteration: 1
 Score =  114 bits (285), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/249 (33%), Positives = 126/249 (50%), Gaps = 29/249 (11%)
Query: 3   KLSTALYGHSMDVRSLSVTPDG-CILSASRDKSAKLWKPND-----------------LS 44
           +L   L GHS  VR ++ +PDG  I SAS DK+ KLW  N                   S
Sbjct: 89  QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFS 148
Query: 45  PGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIK 103
           P  +  T+ SAS D T KLW    Q  + T+  H  +VWGV    +G  I +   DKT+K
Sbjct: 149 PDGQ--TIASASDDKTVKLWNRNGQLLQ-TLTGHSSSVWGVAFSPDGQTIASASDDKTVK 205
Query: 104 LHSEEGEFLKTLTGHTDCVRGLAVLNDTDFV-SCSNDASIRVWDSTTGKCVHTMYGHPNF 162
           L +  G+ L+TLTGH+  VRG+A   D   + S S+D ++++W+   G+ + T+ GH + 
Sbjct: 206 LWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSS 264
Query: 163 IYSVAAH--GDLITSGGEDQCVCVYQNKAQ--NSFMIPAMSVWAVAILPNSD-IVTGSSD 217
           +  VA    G  I S  +D+ V ++    Q   +    + SVW VA  P+   I + S D
Sbjct: 265 VNGVAFRPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDD 324
Query: 218 GIVRVFSAN 226
             V++++ N
Sbjct: 325 KTVKLWNRN 333

>pdb|2YMU|A Chain A, Structure Of A Highly Repetitive Propeller Structure Length = 577

Iteration: 1
 Score =  105 bits (263), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 103/372 (27%), Positives = 167/372 (44%), Gaps = 64/372 (17%)
Query: 3   KLSTALYGHSMDVRSLSVTPDG-CILSASRDKSAKLWKPND------LSPGAKVN----- 50
           +L   L GHS  VR ++ +PDG  I SAS DK+ KLW  N           + VN     
Sbjct: 212 QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVNGVAFR 271
Query: 51  ----TLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLH 105
               T+ SAS D T KLW    Q  + T+  H  +VWGV    +G  I +   DKT+KL 
Sbjct: 272 PDGQTIASASDDKTVKLWNRNGQLLQ-TLTGHSSSVWGVAFSPDGQTIASASDDKTVKLW 330
Query: 106 SEEGEFLKTLTGHTDCVRGLAVLNDTDFV-SCSNDASIRVWDSTTGKCVHTMYGHPNFIY 164
           +  G+ L+TLTGH+  V G+A   D   + S S+D ++++W+   G+ + T+ GH + + 
Sbjct: 331 NRNGQHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVR 389
Query: 165 SVA--AHGDLITSGGEDQCVCVYQNKAQ--NSFMIPAMSVWAVAILPNSD-IVTGSSDGI 219
            VA    G  I S  +D+ V ++    Q   +    + SVW VA  P+   I + S D  
Sbjct: 390 GVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKT 449
Query: 220 VRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQAEDA 279
           V++++ N               ++ +  + +   + GV  S DG   + SA+ D+     
Sbjct: 450 VKLWNRNG--------------QLLQTLTGHSSSVRGVAFSPDGQT-IASASDDKTV--- 491
Query: 280 VQAQYAEEVKKLKSANEQEIGGVKVSDLPGKEVLYEPGKADGDVKMVREGSTVVAYSWSE 339
                     KL + N Q +  +       + V + P           +G T+ + S  +
Sbjct: 492 ----------KLWNRNGQLLQTLTGHSSSVRGVAFSP-----------DGQTIASASDDK 530
Query: 340 ASREWNKLGDVM 351
             + WN+ G ++
Sbjct: 531 TVKLWNRNGQLL 542

>pdb|2YMU|A Chain A, Structure Of A Highly Repetitive Propeller Structure Length = 577

Iteration: 1
 Score = 69.7 bits (169), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 72/300 (24%), Positives = 131/300 (43%), Gaps = 47/300 (15%)
Query: 75  IRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTDF 133
           +  H  +V GV    +G  I +   DKT+KL +  G+ L+TLTGH+  V G+A   D   
Sbjct: 12  LEAHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQT 71
Query: 134 V-SCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVA--AHGDLITSGGEDQCVCVYQNKAQ 190
           + S S+D ++++W+   G+ + T+ GH + +  VA    G  I S  +D+ V ++    Q
Sbjct: 72  IASASDDKTVKLWNRN-GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQ 130
Query: 191 --NSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLK 247
              +    + SVW VA  P+   I + S D  V++++ N               ++ +  
Sbjct: 131 LLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG--------------QLLQTL 176
Query: 248 SANEQEIGGVKVSDDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDL 307
           + +   + GV  S DG   + SA+ D+               KL + N Q +  +     
Sbjct: 177 TGHSSSVWGVAFSPDGQT-IASASDDKTV-------------KLWNRNGQLLQTLTGHSS 222
Query: 308 PGKEVLYEPGKADGDVKMVREGSTVVAYSWSEASREWNKLGDVMGSAGGTQESSGKVLYQ 367
             + V + P           +G T+ + S  +  + WN+ G ++ +  G   S   V ++
Sbjct: 223 SVRGVAFSP-----------DGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVNGVAFR 271

>pdb|3PSP|A Chain A, Crystal Structure Of Pul And Pfu Domain Length = 425

Iteration: 1
 Score =  100 bits (248), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 49/116 (42%), Positives = 77/116 (66%), Gaps = 5/116 (4%)
Query: 311 EVLYEPGKADGDVKMVRE-GSTVVAYSWSEASREWNKLGDVMGSAGGTQESSGKVLYQGK 369
           E+L  PG+ +G + +V+    T+ A+ +S +S  W K+GDV+G+  G   +  K+ ++GK
Sbjct: 38  EILQSPGRKEGQIVVVKSPQGTIEAHQFSNSS--WKKVGDVVGA--GATGNDKKIEFEGK 93
Query: 370 EYDFVFSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHLSQMFLEQVANFIMTNS 425
            YD+VF VDIE+GKPPLKLP NVS++P+ AA  F+  + L   + +QV  FI+ N+
Sbjct: 94  TYDYVFDVDIEDGKPPLKLPINVSDNPYTAADNFLARYELPMSYRDQVVQFILKNT 149

>pdb|3PSP|A Chain A, Crystal Structure Of Pul And Pfu Domain Length = 425

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 48/98 (48%), Gaps = 14/98 (14%)
Query: 389 PYNVSEDPWH---------AAQAFIHTHHLSQMFLEQVANFIMTNSKSKQGPTE-----Y 434
           PY + + P           + Q  I  H  S    ++V + +   +       E     Y
Sbjct: 36  PYEILQSPGRKEGQIVVVKSPQGTIEAHQFSNSSWKKVGDVVGAGATGNDKKIEFEGKTY 95
Query: 435 DFVFSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHL 472
           D+VF VDIE+GKPPLKLP NVS++P+ AA  F+  + L
Sbjct: 96  DYVFDVDIEDGKPPLKLPINVSDNPYTAADNFLARYEL 133

>pdb|3PSP|A Chain A, Crystal Structure Of Pul And Pfu Domain Length = 425

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 25/53 (47%), Positives = 37/53 (69%)
Query: 471 HLTSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHLSQMFLEQVANFIMTNS 523
           ++  VDIE+GKPPLKLP NVS++P+ AA  F+  + L   + +QV  FI+ N+
Sbjct: 97  YVFDVDIEDGKPPLKLPINVSDNPYTAADNFLARYELPMSYRDQVVQFILKNT 149

>pdb|3PST|A Chain A, Crystal Structure Of Pul And Pfu(Mutate) Domain Length = 425

Iteration: 1
 Score = 97.8 bits (242), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 48/116 (41%), Positives = 76/116 (65%), Gaps = 5/116 (4%)
Query: 311 EVLYEPGKADGDVKMVRE-GSTVVAYSWSEASREWNKLGDVMGSAGGTQESSGKVLYQGK 369
           E+L  PG+ +G + +V+    T+ A+ +S +S  W K+GDV+G+  G   +  K+ ++GK
Sbjct: 38  EILQSPGRKEGQIVVVKSPQGTIEAHQFSNSS--WKKVGDVVGA--GATGNDKKIEFEGK 93
Query: 370 EYDFVFSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHLSQMFLEQVANFIMTNS 425
            YD+VF VDIE+GKPPLKLP NVS++P+ AA  F+  + L   + +QV   I+ N+
Sbjct: 94  TYDYVFDVDIEDGKPPLKLPINVSDNPYTAADNFLARYELPMSYRDQVVQLILKNT 149

>pdb|3PST|A Chain A, Crystal Structure Of Pul And Pfu(Mutate) Domain Length = 425

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 48/98 (48%), Gaps = 14/98 (14%)
Query: 389 PYNVSEDPWH---------AAQAFIHTHHLSQMFLEQVANFIMTNSKSKQGPTE-----Y 434
           PY + + P           + Q  I  H  S    ++V + +   +       E     Y
Sbjct: 36  PYEILQSPGRKEGQIVVVKSPQGTIEAHQFSNSSWKKVGDVVGAGATGNDKKIEFEGKTY 95
Query: 435 DFVFSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHL 472
           D+VF VDIE+GKPPLKLP NVS++P+ AA  F+  + L
Sbjct: 96  DYVFDVDIEDGKPPLKLPINVSDNPYTAADNFLARYEL 133

>pdb|3PST|A Chain A, Crystal Structure Of Pul And Pfu(Mutate) Domain Length = 425

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 471 HLTSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHLSQMFLEQVANFIMTNS 523
           ++  VDIE+GKPPLKLP NVS++P+ AA  F+  + L   + +QV   I+ N+
Sbjct: 97  YVFDVDIEDGKPPLKLPINVSDNPYTAADNFLARYELPMSYRDQVVQLILKNT 149

>pdb|2K89|A Chain A, Solution Structure Of A Novel Ubiquitin-Binding Domain From Human Plaa (Pfuc, Gly76-Pro77 Cis Isomer) Length = 80

Iteration: 1
 Score = 95.1 bits (235), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 40/73 (54%), Positives = 55/73 (75%)
Query: 356 GTQESSGKVLYQGKEYDFVFSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHLSQMFLE 415
             Q++SGKVLY+GKE+D+VFS+D+ EG P  KLPYN S+DPW  A  F+  + L+ MFL+
Sbjct: 1   ANQQTSGKVLYEGKEFDYVFSIDVNEGGPSYKLPYNTSDDPWLTAYNFLQKNDLNPMFLD 60
Query: 416 QVANFIMTNSKSK 428
           QVA FI+ N+K +
Sbjct: 61  QVAKFIIDNTKGQ 73

>pdb|2K89|A Chain A, Solution Structure Of A Novel Ubiquitin-Binding Domain From Human Plaa (Pfuc, Gly76-Pro77 Cis Isomer) Length = 80

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 471 HLTSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHLSQMFLEQVANFIMTNSKSK 526
           ++ S+D+ EG P  KLPYN S+DPW  A  F+  + L+ MFL+QVA FI+ N+K +
Sbjct: 18  YVFSIDVNEGGPSYKLPYNTSDDPWLTAYNFLQKNDLNPMFLDQVAKFIIDNTKGQ 73

>pdb|2OVP|B Chain B, Structure Of The Skp1-Fbw7 Complex Length = 445

Iteration: 1
 Score = 88.6 bits (218), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 141/331 (42%), Gaps = 37/331 (11%)
Query: 50  NTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKL-HSEE 108
           N ++S S D T K+W   + +C  T+  H   VW   Q+ + II++G  D+T+K+ ++E 
Sbjct: 130 NRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSS-QMRDNIIISGSTDRTLKVWNAET 188
Query: 109 GEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA 168
           GE + TL GHT  VR +  L++   VS S DA++RVWD  TG+C+H + GH   +  V  
Sbjct: 189 GECIHTLYGHTSTVRCMH-LHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY 247
Query: 169 HGDLITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILPNSDI--VTGSSDGIVRVFSAN 226
            G  + SG  D  V V+  + +            V  L    I  V+GS D  +RV+   
Sbjct: 248 DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVE 307
Query: 227 PDRQAEDAVQAQYAEEVKKLK-----SANEQEIGGVKVSDDGIVRVFSA--NPDRQAEDA 279
                      Q      +LK     S N      VK+ D    +       P++     
Sbjct: 308 TGNCIHTLTGHQSLTSGMELKDNILVSGNADST--VKIWDIKTGQCLQTLQGPNKHQSAV 365
Query: 280 VQAQYAEEVKKLKSANEQEIGGVKVSDLPGKE-----VLYEPGKADGDVKMVREGSTVVA 334
              Q+ +      S +    G VK+ DL   E     V  E G + G V  +R  +T   
Sbjct: 366 TCLQFNKNFVITSSDD----GTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNT--- 418
Query: 335 YSWSEASREWNKLGDVMGSAGGTQESSGKVL 365
                      KL   +GS  GT+E+   VL
Sbjct: 419 -----------KLVCAVGSRNGTEETKLLVL 438

>pdb|3L3F|X Chain X, Crystal Structure Of A Pfu-Pul Domain Pair Of Saccharomyces Cerevisiae Doa1UFD3 Length = 362

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 39/86 (45%), Positives = 59/86 (68%), Gaps = 2/86 (2%)
Query: 340 ASREWNKLGDVMGSAGGTQESSGKVLYQGKEYDFVFSVDIEEGKPPLKLPYNVSEDPWHA 399
           ++  W K+GDV+G+  G   +  K+ ++GK YD+VF VDIE+GKPPLKLP NVS++P+ A
Sbjct: 3   SNSSWKKVGDVVGA--GATGNDKKIEFEGKTYDYVFDVDIEDGKPPLKLPINVSDNPYTA 60
Query: 400 AQAFIHTHHLSQMFLEQVANFIMTNS 425
           A  F+  + L   + +QV  FI+ N+
Sbjct: 61  ADNFLARYELPXSYRDQVVQFILKNT 86

>pdb|3L3F|X Chain X, Crystal Structure Of A Pfu-Pul Domain Pair Of Saccharomyces Cerevisiae Doa1UFD3 Length = 362

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 25/53 (47%), Positives = 37/53 (69%)
Query: 471 HLTSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHLSQMFLEQVANFIMTNS 523
           ++  VDIE+GKPPLKLP NVS++P+ AA  F+  + L   + +QV  FI+ N+
Sbjct: 34  YVFDVDIEDGKPPLKLPINVSDNPYTAADNFLARYELPXSYRDQVVQFILKNT 86

>pdb|1TRJ|A Chain A, Homology Model Of Yeast Rack1 Protein Fitted Into 11.7a Cryo-em Map Of Yeast 80s Ribosome Length = 314

Iteration: 1
 Score = 79.0 bits (193), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 121/265 (45%), Gaps = 35/265 (13%)
Query: 4   LSTALYGHSMDVRSLSVTPD--GCILSASRDKSAKLWK--PNDLSPGAKVNTL------- 52
           L   L GH+  V SL+ +      +LSASRDK+   WK   +D   G  V +        
Sbjct: 9   LRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIV 68
Query: 53  ------------LSASWDMTAKLWCLESQQCKLTIRQHEMAVWGV-IQLANGIIVTGCAD 99
                       LSASWD T +LW + + +       H+  V  V I     +I++G  D
Sbjct: 69  QDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRD 128
Query: 100 KTIKLHSEEGEFLKTLTGHTDCVRGLAVL-------NDTDFVSCSNDASIRVWDSTTGKC 152
           KTIK+ + +G+ L TL GH D V  + V+       +    +S  ND  ++ W+    + 
Sbjct: 129 KTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQI 188
Query: 153 VHTMYGHPNFIYSVAAH--GDLITSGGEDQCVCVYQNKAQNS-FMIPAMS-VWAVAILPN 208
                GH + I ++ A   G LI S G+D  + ++   A+ + + + A   V+++A  PN
Sbjct: 189 EADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPN 248
Query: 209 SDIVTGSSDGIVRVFSANPDRQAED 233
              +  ++   ++VFS +P    +D
Sbjct: 249 RYWLAAATATGIKVFSLDPQYLVDD 273

>pdb|3RFG|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P63 Length = 319

Iteration: 1
 Score = 79.0 bits (193), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 121/265 (45%), Gaps = 35/265 (13%)
Query: 4   LSTALYGHSMDVRSLSVTPD--GCILSASRDKSAKLWK--PNDLSPGAKVNTL------- 52
           L   L GH+  V SL+ +      +LSASRDK+   WK   +D   G  V +        
Sbjct: 9   LRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIV 68
Query: 53  ------------LSASWDMTAKLWCLESQQCKLTIRQHEMAVWGV-IQLANGIIVTGCAD 99
                       LSASWD T +LW + + +       H+  V  V I     +I++G  D
Sbjct: 69  QDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRD 128
Query: 100 KTIKLHSEEGEFLKTLTGHTDCVRGLAVL-------NDTDFVSCSNDASIRVWDSTTGKC 152
           KTIK+ + +G+ L TL GH D V  + V+       +    +S  ND  ++ W+    + 
Sbjct: 129 KTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQI 188
Query: 153 VHTMYGHPNFIYSVAAH--GDLITSGGEDQCVCVYQNKAQNS-FMIPAMS-VWAVAILPN 208
                GH + I ++ A   G LI S G+D  + ++   A+ + + + A   V+++A  PN
Sbjct: 189 EADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPN 248
Query: 209 SDIVTGSSDGIVRVFSANPDRQAED 233
              +  ++   ++VFS +P    +D
Sbjct: 249 RYWLAAATATGIKVFSLDPQYLVDD 273

>pdb|3RFH|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P21 Length = 319

Iteration: 1
 Score = 79.0 bits (193), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 121/265 (45%), Gaps = 35/265 (13%)
Query: 4   LSTALYGHSMDVRSLSVTPD--GCILSASRDKSAKLWK--PNDLSPGAKVNTL------- 52
           L   L GH+  V SL+ +      +LSASRDK+   WK   +D   G  V +        
Sbjct: 9   LRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIV 68
Query: 53  ------------LSASWDMTAKLWCLESQQCKLTIRQHEMAVWGV-IQLANGIIVTGCAD 99
                       LSASWD T +LW + + +       H+  V  V I     +I++G  D
Sbjct: 69  QDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRD 128
Query: 100 KTIKLHSEEGEFLKTLTGHTDCVRGLAVL-------NDTDFVSCSNDASIRVWDSTTGKC 152
           KTIK+ + +G+ L TL GH D V  + V+       +    +S  ND  ++ W+    + 
Sbjct: 129 KTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQI 188
Query: 153 VHTMYGHPNFIYSVAAH--GDLITSGGEDQCVCVYQNKAQNS-FMIPAMS-VWAVAILPN 208
                GH + I ++ A   G LI S G+D  + ++   A+ + + + A   V+++A  PN
Sbjct: 189 EADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPN 248
Query: 209 SDIVTGSSDGIVRVFSANPDRQAED 233
              +  ++   ++VFS +P    +D
Sbjct: 249 RYWLAAATATGIKVFSLDPQYLVDD 273

>pdb|3IZB|AA Chain a, Localization Of The Small Subunit Ribosomal Proteins Into A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome Length = 319

Iteration: 1
 Score = 78.6 bits (192), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 121/265 (45%), Gaps = 35/265 (13%)
Query: 4   LSTALYGHSMDVRSLSVTPD--GCILSASRDKSAKLWK--PNDLSPGAKVNTL------- 52
           L   L GH+  V SL+ +      +LSASRDK+   WK   +D   G  V +        
Sbjct: 9   LRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIV 68
Query: 53  ------------LSASWDMTAKLWCLESQQCKLTIRQHEMAVWGV-IQLANGIIVTGCAD 99
                       LSASWD T +LW + + +       H+  V  V I     +I++G  D
Sbjct: 69  QDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRD 128
Query: 100 KTIKLHSEEGEFLKTLTGHTDCVRGLAVL-------NDTDFVSCSNDASIRVWDSTTGKC 152
           KTIK+ + +G+ L TL GH D V  + V+       +    +S  ND  ++ W+    + 
Sbjct: 129 KTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQI 188
Query: 153 VHTMYGHPNFIYSVAAH--GDLITSGGEDQCVCVYQNKAQNS-FMIPAMS-VWAVAILPN 208
                GH + I ++ A   G LI S G+D  + ++   A+ + + + A   V+++A  PN
Sbjct: 189 EADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPN 248
Query: 209 SDIVTGSSDGIVRVFSANPDRQAED 233
              +  ++   ++VFS +P    +D
Sbjct: 249 RYWLAAATATGIKVFSLDPQYLVDD 273

>pdb|3JYV|R Chain R, Structure Of The 40s Rrna And Proteins And PE TRNA FOR EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome At 8.9a Resolution Length = 313

Iteration: 1
 Score = 78.6 bits (192), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 121/265 (45%), Gaps = 35/265 (13%)
Query: 4   LSTALYGHSMDVRSLSVTPD--GCILSASRDKSAKLWK--PNDLSPGAKVNTL------- 52
           L   L GH+  V SL+ +      +LSASRDK+   WK   +D   G  V +        
Sbjct: 3   LRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIV 62
Query: 53  ------------LSASWDMTAKLWCLESQQCKLTIRQHEMAVWGV-IQLANGIIVTGCAD 99
                       LSASWD T +LW + + +       H+  V  V I     +I++G  D
Sbjct: 63  QDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRD 122
Query: 100 KTIKLHSEEGEFLKTLTGHTDCVRGLAVL-------NDTDFVSCSNDASIRVWDSTTGKC 152
           KTIK+ + +G+ L TL GH D V  + V+       +    +S  ND  ++ W+    + 
Sbjct: 123 KTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQI 182
Query: 153 VHTMYGHPNFIYSVAAH--GDLITSGGEDQCVCVYQNKAQNS-FMIPAMS-VWAVAILPN 208
                GH + I ++ A   G LI S G+D  + ++   A+ + + + A   V+++A  PN
Sbjct: 183 EADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPN 242
Query: 209 SDIVTGSSDGIVRVFSANPDRQAED 233
              +  ++   ++VFS +P    +D
Sbjct: 243 RYWLAAATATGIKVFSLDPQYLVDD 267

>pdb|3FRX|A Chain A, Crystal Structure Of The Yeast Orthologue Of Rack1, Asc1. Length = 319

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 120/265 (45%), Gaps = 35/265 (13%)
Query: 4   LSTALYGHSMDVRSLSVTPD--GCILSASRDKSAKLWK--PNDLSPGAKVNTL------- 52
           L   L GH+  V SL+ +      +LSASRDK+   WK   +D   G  V +        
Sbjct: 9   LRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIV 68
Query: 53  ------------LSASWDMTAKLWCLESQQCKLTIRQHEMAVWGV-IQLANGIIVTGCAD 99
                       LSASWD T +LW + + +       H+  V  V I      I++G  D
Sbjct: 69  QDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVXSVDIDKKASXIISGSRD 128
Query: 100 KTIKLHSEEGEFLKTLTGHTDCVRGLAVL-------NDTDFVSCSNDASIRVWDSTTGKC 152
           KTIK+ + +G+ L TL GH D V  + V+       +    +S  ND  ++ W+    + 
Sbjct: 129 KTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKXVKAWNLNQFQI 188
Query: 153 VHTMYGHPNFIYSVAAH--GDLITSGGEDQCVCVYQNKAQNS-FMIPAMS-VWAVAILPN 208
                GH + I ++ A   G LI S G+D  + ++   A+ + + + A   V+++A  PN
Sbjct: 189 EADFIGHNSNINTLTASPDGTLIASAGKDGEIXLWNLAAKKAXYTLSAQDEVFSLAFSPN 248
Query: 209 SDIVTGSSDGIVRVFSANPDRQAED 233
              +  ++   ++VFS +P    +D
Sbjct: 249 RYWLAAATATGIKVFSLDPQYLVDD 273

>pdb|3N0D|A Chain A, Crystal Structure Of Wdr5 Mutant (W330f) Length = 315

Iteration: 1
 Score = 75.9 bits (185), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 77/307 (25%), Positives = 137/307 (44%), Gaps = 45/307 (14%)
Query: 2   YKLSTALYGHSMDVRSLSVTPDG-CILSASRDKSAKLWKP----------------NDLS 44
           Y L   L GH+  V S+  +P+G  + S+S DK  K+W                  +D++
Sbjct: 16  YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA 75
Query: 45  PGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGV-IQLANGIIVTGCADKTIK 103
             +  N L+SAS D T K+W + S +C  T++ H   V+       + +IV+G  D++++
Sbjct: 76  WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 135
Query: 104 LHS-EEGEFLKTLTGHTDCVRGLAVLNDTDF-VSCSNDASIRVWDSTTGKCVHTMYG--- 158
           +   + G+ LKTL  H+D V  +    D    VS S D   R+WD+ +G+C+ T+     
Sbjct: 136 IWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 195
Query: 159 --------HPNFIYSVAAHGD---LITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILP 207
                    PN  Y +AA  D    +    + +C+  Y       + I A      ++  
Sbjct: 196 PPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFA----NFSVTG 251
Query: 208 NSDIVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSA---NEQEIGGVKVSDDGI 264
              IV+GS D +V ++    + Q ++ VQ         + +A    E  I    + +D  
Sbjct: 252 GKWIVSGSEDNLVYIW----NLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKT 307
Query: 265 VRVFSAN 271
           +++F ++
Sbjct: 308 IKLFKSD 314

>pdb|2XL2|A Chain A, Wdr5 In Complex With An Rbbp5 Peptide Recruited To Novel Site Length = 334

Iteration: 1
 Score = 75.5 bits (184), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 123/269 (45%), Gaps = 42/269 (15%)
Query: 2   YKLSTALYGHSMDVRSLSVTPDG-CILSASRDKSAKLWKP----------------NDLS 44
           Y L   L GH+  V S+  +P+G  + S+S DK  K+W                  +D++
Sbjct: 35  YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA 94
Query: 45  PGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGV-IQLANGIIVTGCADKTIK 103
             +  N L+SAS D T K+W + S +C  T++ H   V+       + +IV+G  D++++
Sbjct: 95  WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 154
Query: 104 LHS-EEGEFLKTLTGHTDCVRGLAVLNDTDF-VSCSNDASIRVWDSTTGKCVHTMYG--- 158
           +   + G+ LKTL  H+D V  +    D    VS S D   R+WD+ +G+C+ T+     
Sbjct: 155 IWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 214
Query: 159 --------HPNFIYSVAAHGD---LITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILP 207
                    PN  Y +AA  D    +    + +C+  Y       + I A      ++  
Sbjct: 215 PPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFA----NFSVTG 270
Query: 208 NSDIVTGSSDGIVRVFSANPDRQAEDAVQ 236
              IV+GS D +V ++    + Q ++ VQ
Sbjct: 271 GKWIVSGSEDNLVYIW----NLQTKEIVQ 295

>pdb|2GNQ|A Chain A, Structure Of Wdr5 Length = 336

Iteration: 1
 Score = 75.5 bits (184), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 123/269 (45%), Gaps = 42/269 (15%)
Query: 2   YKLSTALYGHSMDVRSLSVTPDG-CILSASRDKSAKLWKP----------------NDLS 44
           Y L   L GH+  V S+  +P+G  + S+S DK  K+W                  +D++
Sbjct: 37  YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA 96
Query: 45  PGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGV-IQLANGIIVTGCADKTIK 103
             +  N L+SAS D T K+W + S +C  T++ H   V+       + +IV+G  D++++
Sbjct: 97  WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 156
Query: 104 LHS-EEGEFLKTLTGHTDCVRGLAVLNDTDF-VSCSNDASIRVWDSTTGKCVHTMYG--- 158
           +   + G+ LKTL  H+D V  +    D    VS S D   R+WD+ +G+C+ T+     
Sbjct: 157 IWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 216
Query: 159 --------HPNFIYSVAAHGD---LITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILP 207
                    PN  Y +AA  D    +    + +C+  Y       + I A      ++  
Sbjct: 217 PPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFA----NFSVTG 272
Query: 208 NSDIVTGSSDGIVRVFSANPDRQAEDAVQ 236
              IV+GS D +V ++    + Q ++ VQ
Sbjct: 273 GKWIVSGSEDNLVYIW----NLQTKEIVQ 297

>pdb|3EMH|A Chain A, Structural Basis Of Wdr5-Mll Interaction Length = 318

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 123/269 (45%), Gaps = 42/269 (15%)
Query: 2   YKLSTALYGHSMDVRSLSVTPDG-CILSASRDKSAKLWKP----------------NDLS 44
           Y L   L GH+  V S+  +P+G  + S+S DK  K+W                  +D++
Sbjct: 19  YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA 78
Query: 45  PGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGV-IQLANGIIVTGCADKTIK 103
             +  N L+SAS D T K+W + S +C  T++ H   V+       + +IV+G  D++++
Sbjct: 79  WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 138
Query: 104 LHS-EEGEFLKTLTGHTDCVRGLAVLNDTDF-VSCSNDASIRVWDSTTGKCVHTMYG--- 158
           +   + G+ LKTL  H+D V  +    D    VS S D   R+WD+ +G+C+ T+     
Sbjct: 139 IWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 198
Query: 159 --------HPNFIYSVAAHGD---LITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILP 207
                    PN  Y +AA  D    +    + +C+  Y       + I A      ++  
Sbjct: 199 PPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFA----NFSVTG 254
Query: 208 NSDIVTGSSDGIVRVFSANPDRQAEDAVQ 236
              IV+GS D +V ++    + Q ++ VQ
Sbjct: 255 GKWIVSGSEDNLVYIW----NLQTKEIVQ 279

>pdb|2H9L|A Chain A, Wdr5delta23 Length = 329

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 123/269 (45%), Gaps = 42/269 (15%)
Query: 2   YKLSTALYGHSMDVRSLSVTPDG-CILSASRDKSAKLWKP----------------NDLS 44
           Y L   L GH+  V S+  +P+G  + S+S DK  K+W                  +D++
Sbjct: 30  YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA 89
Query: 45  PGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGV-IQLANGIIVTGCADKTIK 103
             +  N L+SAS D T K+W + S +C  T++ H   V+       + +IV+G  D++++
Sbjct: 90  WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 149
Query: 104 LHS-EEGEFLKTLTGHTDCVRGLAVLNDTDF-VSCSNDASIRVWDSTTGKCVHTMYG--- 158
           +   + G+ LKTL  H+D V  +    D    VS S D   R+WD+ +G+C+ T+     
Sbjct: 150 IWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 209
Query: 159 --------HPNFIYSVAAHGD---LITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILP 207
                    PN  Y +AA  D    +    + +C+  Y       + I A      ++  
Sbjct: 210 PPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFA----NFSVTG 265
Query: 208 NSDIVTGSSDGIVRVFSANPDRQAEDAVQ 236
              IV+GS D +V ++    + Q ++ VQ
Sbjct: 266 GKWIVSGSEDNLVYIW----NLQTKEIVQ 290

>pdb|4A7J|A Chain A, Symmetric Dimethylation Of H3 Arginine 2 Is A Novel Histone Mark That Supports Euchromatin Maintenance Length = 318

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 123/269 (45%), Gaps = 42/269 (15%)
Query: 2   YKLSTALYGHSMDVRSLSVTPDG-CILSASRDKSAKLWKP----------------NDLS 44
           Y L   L GH+  V S+  +P+G  + S+S DK  K+W                  +D++
Sbjct: 19  YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA 78
Query: 45  PGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGV-IQLANGIIVTGCADKTIK 103
             +  N L+SAS D T K+W + S +C  T++ H   V+       + +IV+G  D++++
Sbjct: 79  WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 138
Query: 104 LHS-EEGEFLKTLTGHTDCVRGLAVLNDTDF-VSCSNDASIRVWDSTTGKCVHTMYG--- 158
           +   + G+ LKTL  H+D V  +    D    VS S D   R+WD+ +G+C+ T+     
Sbjct: 139 IWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 198
Query: 159 --------HPNFIYSVAAHGD---LITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILP 207
                    PN  Y +AA  D    +    + +C+  Y       + I A      ++  
Sbjct: 199 PPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFA----NFSVTG 254
Query: 208 NSDIVTGSSDGIVRVFSANPDRQAEDAVQ 236
              IV+GS D +V ++    + Q ++ VQ
Sbjct: 255 GKWIVSGSEDNLVYIW----NLQTKEIVQ 279

>pdb|2H13|A Chain A, Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length = 317

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 123/269 (45%), Gaps = 42/269 (15%)
Query: 2   YKLSTALYGHSMDVRSLSVTPDG-CILSASRDKSAKLWKP----------------NDLS 44
           Y L   L GH+  V S+  +P+G  + S+S DK  K+W                  +D++
Sbjct: 18  YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA 77
Query: 45  PGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGV-IQLANGIIVTGCADKTIK 103
             +  N L+SAS D T K+W + S +C  T++ H   V+       + +IV+G  D++++
Sbjct: 78  WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 137
Query: 104 LHS-EEGEFLKTLTGHTDCVRGLAVLNDTDF-VSCSNDASIRVWDSTTGKCVHTMYG--- 158
           +   + G+ LKTL  H+D V  +    D    VS S D   R+WD+ +G+C+ T+     
Sbjct: 138 IWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 197
Query: 159 --------HPNFIYSVAAHGD---LITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILP 207
                    PN  Y +AA  D    +    + +C+  Y       + I A      ++  
Sbjct: 198 PPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFA----NFSVTG 253
Query: 208 NSDIVTGSSDGIVRVFSANPDRQAEDAVQ 236
              IV+GS D +V ++    + Q ++ VQ
Sbjct: 254 GKWIVSGSEDNLVYIW----NLQTKEIVQ 278

>pdb|3N0E|A Chain A, Crystal Structure Of Wdr5 Mutant (W330y) Length = 315

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 137/307 (44%), Gaps = 45/307 (14%)
Query: 2   YKLSTALYGHSMDVRSLSVTPDG-CILSASRDKSAKLWKP----------------NDLS 44
           Y L   L GH+  V S+  +P+G  + S+S DK  K+W                  +D++
Sbjct: 16  YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA 75
Query: 45  PGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGV-IQLANGIIVTGCADKTIK 103
             +  N L+SAS D T K+W + S +C  T++ H   V+       + +IV+G  D++++
Sbjct: 76  WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 135
Query: 104 LHS-EEGEFLKTLTGHTDCVRGLAVLNDTDF-VSCSNDASIRVWDSTTGKCVHTMYG--- 158
           +   + G+ LKTL  H+D V  +    D    VS S D   R+WD+ +G+C+ T+     
Sbjct: 136 IWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 195
Query: 159 --------HPNFIYSVAAHGD---LITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILP 207
                    PN  Y +AA  D    +    + +C+  Y       + I A      ++  
Sbjct: 196 PPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFA----NFSVTG 251
Query: 208 NSDIVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSA---NEQEIGGVKVSDDGI 264
              IV+GS D +V ++    + Q ++ VQ         + +A    E  I    + +D  
Sbjct: 252 GKWIVSGSEDNLVYIW----NLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKT 307
Query: 265 VRVFSAN 271
           ++++ ++
Sbjct: 308 IKLYKSD 314

>pdb|3MXX|A Chain A, Crystal Structure Of Wdr5 Mutant (S62a) Length = 315

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 123/269 (45%), Gaps = 42/269 (15%)
Query: 2   YKLSTALYGHSMDVRSLSVTPDGCILSASR-DKSAKLWKP----------------NDLS 44
           Y L   L GH+  V S+  +P+G  L+AS  DK  K+W                  +D++
Sbjct: 16  YALKFTLAGHTKAVSSVKFSPNGEWLAASSADKLIKIWGAYDGKFEKTISGHKLGISDVA 75
Query: 45  PGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGV-IQLANGIIVTGCADKTIK 103
             +  N L+SAS D T K+W + S +C  T++ H   V+       + +IV+G  D++++
Sbjct: 76  WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 135
Query: 104 LHS-EEGEFLKTLTGHTDCVRGLAVLNDTDF-VSCSNDASIRVWDSTTGKCVHTMYG--- 158
           +   + G+ LKTL  H+D V  +    D    VS S D   R+WD+ +G+C+ T+     
Sbjct: 136 IWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 195
Query: 159 --------HPNFIYSVAAHGD---LITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILP 207
                    PN  Y +AA  D    +    + +C+  Y       + I A      ++  
Sbjct: 196 PPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFA----NFSVTG 251
Query: 208 NSDIVTGSSDGIVRVFSANPDRQAEDAVQ 236
              IV+GS D +V ++    + Q ++ VQ
Sbjct: 252 GKWIVSGSEDNLVYIW----NLQTKEIVQ 276

>pdb|2H68|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module Of The Mll1 Complex Length = 312

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 123/269 (45%), Gaps = 42/269 (15%)
Query: 2   YKLSTALYGHSMDVRSLSVTPDG-CILSASRDKSAKLWKP----------------NDLS 44
           Y L   L GH+  V S+  +P+G  + S+S DK  K+W                  +D++
Sbjct: 13  YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA 72
Query: 45  PGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGV-IQLANGIIVTGCADKTIK 103
             +  N L+SAS D T K+W + S +C  T++ H   V+       + +IV+G  D++++
Sbjct: 73  WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 132
Query: 104 LHS-EEGEFLKTLTGHTDCVRGLAVLNDTDF-VSCSNDASIRVWDSTTGKCVHTMYG--- 158
           +   + G+ LKTL  H+D V  +    D    VS S D   R+WD+ +G+C+ T+     
Sbjct: 133 IWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 192
Query: 159 --------HPNFIYSVAAHGD---LITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILP 207
                    PN  Y +AA  D    +    + +C+  Y       + I A      ++  
Sbjct: 193 PPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFA----NFSVTG 248
Query: 208 NSDIVTGSSDGIVRVFSANPDRQAEDAVQ 236
              IV+GS D +V ++    + Q ++ VQ
Sbjct: 249 GKWIVSGSEDNLVYIW----NLQTKEIVQ 273

>pdb|2H9M|A Chain A, Wdr5 In Complex With Unmodified H3k4 Peptide Length = 313

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 123/269 (45%), Gaps = 42/269 (15%)
Query: 2   YKLSTALYGHSMDVRSLSVTPDG-CILSASRDKSAKLWKP----------------NDLS 44
           Y L   L GH+  V S+  +P+G  + S+S DK  K+W                  +D++
Sbjct: 14  YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA 73
Query: 45  PGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGV-IQLANGIIVTGCADKTIK 103
             +  N L+SAS D T K+W + S +C  T++ H   V+       + +IV+G  D++++
Sbjct: 74  WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 133
Query: 104 LHS-EEGEFLKTLTGHTDCVRGLAVLNDTDF-VSCSNDASIRVWDSTTGKCVHTMYG--- 158
           +   + G+ LKTL  H+D V  +    D    VS S D   R+WD+ +G+C+ T+     
Sbjct: 134 IWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 193
Query: 159 --------HPNFIYSVAAHGD---LITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILP 207
                    PN  Y +AA  D    +    + +C+  Y       + I A      ++  
Sbjct: 194 PPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFA----NFSVTG 249
Query: 208 NSDIVTGSSDGIVRVFSANPDRQAEDAVQ 236
              IV+GS D +V ++    + Q ++ VQ
Sbjct: 250 GKWIVSGSEDNLVYIW----NLQTKEIVQ 274

>pdb|3SMR|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With Compound Length = 312

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 123/269 (45%), Gaps = 42/269 (15%)
Query: 2   YKLSTALYGHSMDVRSLSVTPDG-CILSASRDKSAKLWKP----------------NDLS 44
           Y L   L GH+  V S+  +P+G  + S+S DK  K+W                  +D++
Sbjct: 13  YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA 72
Query: 45  PGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGV-IQLANGIIVTGCADKTIK 103
             +  N L+SAS D T K+W + S +C  T++ H   V+       + +IV+G  D++++
Sbjct: 73  WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 132
Query: 104 LHS-EEGEFLKTLTGHTDCVRGLAVLNDTDF-VSCSNDASIRVWDSTTGKCVHTMYG--- 158
           +   + G+ LKTL  H+D V  +    D    VS S D   R+WD+ +G+C+ T+     
Sbjct: 133 IWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 192
Query: 159 --------HPNFIYSVAAHGD---LITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILP 207
                    PN  Y +AA  D    +    + +C+  Y       + I A      ++  
Sbjct: 193 PPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFA----NFSVTG 248
Query: 208 NSDIVTGSSDGIVRVFSANPDRQAEDAVQ 236
              IV+GS D +V ++    + Q ++ VQ
Sbjct: 249 GKWIVSGSEDNLVYIW----NLQTKEIVQ 273

>pdb|3PSL|A Chain A, Fine-Tuning The Stimulation Of Mll1 Methyltransferase Activity By A Histone H3 Based Peptide Mimetic Length = 318

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 123/269 (45%), Gaps = 42/269 (15%)
Query: 2   YKLSTALYGHSMDVRSLSVTPDG-CILSASRDKSAKLWKP----------------NDLS 44
           Y L   L GH+  V S+  +P+G  + S+S DK  K+W                  +D++
Sbjct: 19  YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA 78
Query: 45  PGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGV-IQLANGIIVTGCADKTIK 103
             +  N L+SAS D T K+W + S +C  T++ H   V+       + +IV+G  D++++
Sbjct: 79  WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 138
Query: 104 LHS-EEGEFLKTLTGHTDCVRGLAVLNDTDF-VSCSNDASIRVWDSTTGKCVHTMYG--- 158
           +   + G+ LKTL  H+D V  +    D    VS S D   R+WD+ +G+C+ T+     
Sbjct: 139 IWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 198
Query: 159 --------HPNFIYSVAAHGD---LITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILP 207
                    PN  Y +AA  D    +    + +C+  Y       + I A      ++  
Sbjct: 199 PPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFA----NFSVTG 254
Query: 208 NSDIVTGSSDGIVRVFSANPDRQAEDAVQ 236
              IV+GS D +V ++    + Q ++ VQ
Sbjct: 255 GKWIVSGSEDNLVYIW----NLQTKEIVQ 279

>pdb|2G99|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 308

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 123/269 (45%), Gaps = 42/269 (15%)
Query: 2   YKLSTALYGHSMDVRSLSVTPDG-CILSASRDKSAKLWKP----------------NDLS 44
           Y L   L GH+  V S+  +P+G  + S+S DK  K+W                  +D++
Sbjct: 9   YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA 68
Query: 45  PGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGV-IQLANGIIVTGCADKTIK 103
             +  N L+SAS D T K+W + S +C  T++ H   V+       + +IV+G  D++++
Sbjct: 69  WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 128
Query: 104 LHS-EEGEFLKTLTGHTDCVRGLAVLNDTDF-VSCSNDASIRVWDSTTGKCVHTMYG--- 158
           +   + G+ LKTL  H+D V  +    D    VS S D   R+WD+ +G+C+ T+     
Sbjct: 129 IWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 188
Query: 159 --------HPNFIYSVAAHGD---LITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILP 207
                    PN  Y +AA  D    +    + +C+  Y       + I A      ++  
Sbjct: 189 PPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFA----NFSVTG 244
Query: 208 NSDIVTGSSDGIVRVFSANPDRQAEDAVQ 236
              IV+GS D +V ++    + Q ++ VQ
Sbjct: 245 GKWIVSGSEDNLVYIW----NLQTKEIVQ 269

>pdb|3ZEY|7 Chain 7, High-resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome Length = 318

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 75/276 (27%), Positives = 120/276 (43%), Gaps = 40/276 (14%)
Query: 8   LYGHSMDVRSLSV--TPDGC--ILSASRDKSAKLWKPN---------------------- 41
           L GH   V SL+   TP+    ++S SRDK+   W PN                      
Sbjct: 9   LTGHRGWVTSLACPQTPETATKVVSTSRDKTLLSWGPNPDRHSSECSYGLPDRRLEGHSA 68
Query: 42  ---DLSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGV-IQLANGIIVTGC 97
              D++     N  +SASWD + +LW L++ QC+     H   V  V     N  IV+G 
Sbjct: 69  FVSDVALSNNGNFAVSASWDHSLRLWNLQNGQCQYKFLGHTKDVLSVAFSPDNRQIVSGG 128
Query: 98  ADKTIKLHSEEGEFLKTLT--GHTD---CVRGLAVLNDTDFVSCSNDASIRVWDSTTGKC 152
            D  +++ + +GE + TL+   HTD   CVR    L+    VS   D  ++VWD  TG+ 
Sbjct: 129 RDNALRVWNVKGECMHTLSRGAHTDWVSCVRFSPSLDAPVIVSGGWDNLVKVWDLATGRL 188
Query: 153 VHTMYGHPNFIYSVAAH--GDLITSGGEDQCVCVYQNKAQNSF--MIPAMSVWAVAILPN 208
           V  + GH N++ SV     G L  S  +D    ++      +   M     +  +   PN
Sbjct: 189 VTDLKGHTNYVTSVTVSPDGSLCASSDKDGVARLWDLTKGEALSEMAAGAPINQICFSPN 248
Query: 209 SDIVTGSSDGIVRVFSA-NPDRQAEDAVQAQYAEEV 243
              +  +++  +R+F   N D   E A + Q ++++
Sbjct: 249 RYWMCAATEKGIRIFDLENKDIIVELAPEHQGSKKI 284

>pdb|2G9A|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 311

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 123/269 (45%), Gaps = 42/269 (15%)
Query: 2   YKLSTALYGHSMDVRSLSVTPDG-CILSASRDKSAKLWKP----------------NDLS 44
           Y L   L GH+  V S+  +P+G  + S+S DK  K+W                  +D++
Sbjct: 12  YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA 71
Query: 45  PGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGV-IQLANGIIVTGCADKTIK 103
             +  N L+SAS D T K+W + S +C  T++ H   V+       + +IV+G  D++++
Sbjct: 72  WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 131
Query: 104 LHS-EEGEFLKTLTGHTDCVRGLAVLNDTDF-VSCSNDASIRVWDSTTGKCVHTMYG--- 158
           +   + G+ LKTL  H+D V  +    D    VS S D   R+WD+ +G+C+ T+     
Sbjct: 132 IWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 191
Query: 159 --------HPNFIYSVAAHGD---LITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILP 207
                    PN  Y +AA  D    +    + +C+  Y       + I A      ++  
Sbjct: 192 PPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFA----NFSVTG 247
Query: 208 NSDIVTGSSDGIVRVFSANPDRQAEDAVQ 236
              IV+GS D +V ++    + Q ++ VQ
Sbjct: 248 GKWIVSGSEDNLVYIW----NLQTKEIVQ 272

>pdb|2CO0|A Chain A, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom Length = 315

Iteration: 1
 Score = 72.8 bits (177), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 122/269 (45%), Gaps = 42/269 (15%)
Query: 2   YKLSTALYGHSMDVRSLSVTPDG-CILSASRDKSAKLWKP----------------NDLS 44
           Y L   L GH+  V S+  +P+G  + S+S DK  K+W                  +D++
Sbjct: 16  YALMFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA 75
Query: 45  PGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGV-IQLANGIIVTGCADKTIK 103
             +  N L+SAS D T K+W + S +C  T++ H   V+       + +IV+G  D++++
Sbjct: 76  WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 135
Query: 104 LHS-EEGEFLKTLTGHTDCVRGLAVLNDTDF-VSCSNDASIRVWDSTTGKCVHTMYG--- 158
           +   + G  LKTL  H+D V  +    D    VS S D   R+WD+ +G+C+ T+     
Sbjct: 136 IWDVKTGMCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 195
Query: 159 --------HPNFIYSVAAHGD---LITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILP 207
                    PN  Y +AA  D    +    + +C+  Y       + I A      ++  
Sbjct: 196 PPVSFVKFSPNGKYILAATLDNDLKLWDYSKGKCLKTYTGHKNEKYCIFA----NFSVTG 251
Query: 208 NSDIVTGSSDGIVRVFSANPDRQAEDAVQ 236
              IV+GS D +V ++    + Q ++ VQ
Sbjct: 252 GKWIVSGSEDNMVYIW----NLQTKEIVQ 276

>pdb|2CNX|A Chain A, Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.1 Angstrom Length = 315

Iteration: 1
 Score = 72.8 bits (177), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 122/269 (45%), Gaps = 42/269 (15%)
Query: 2   YKLSTALYGHSMDVRSLSVTPDG-CILSASRDKSAKLWKP----------------NDLS 44
           Y L   L GH+  V S+  +P+G  + S+S DK  K+W                  +D++
Sbjct: 16  YALMFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA 75
Query: 45  PGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGV-IQLANGIIVTGCADKTIK 103
             +  N L+SAS D T K+W + S +C  T++ H   V+       + +IV+G  D++++
Sbjct: 76  WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 135
Query: 104 LHS-EEGEFLKTLTGHTDCVRGLAVLNDTDF-VSCSNDASIRVWDSTTGKCVHTMYG--- 158
           +   + G  LKTL  H+D V  +    D    VS S D   R+WD+ +G+C+ T+     
Sbjct: 136 IWDVKTGMCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 195
Query: 159 --------HPNFIYSVAAHGD---LITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILP 207
                    PN  Y +AA  D    +    + +C+  Y       + I A      ++  
Sbjct: 196 PPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFA----NFSVTG 251
Query: 208 NSDIVTGSSDGIVRVFSANPDRQAEDAVQ 236
              IV+GS D +V ++    + Q ++ VQ
Sbjct: 252 GKWIVSGSEDNMVYIW----NLQTKEIVQ 276

>pdb|1VYH|C Chain C, Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410

Iteration: 1
 Score = 72.4 bits (176), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 107/251 (42%), Gaps = 48/251 (19%)
Query: 2   YKLSTALYGHSMDVRSLSVTPDG-CILSASRDKSAKLWKPND----------------LS 44
           ++    ++GH  +V S+S+ P+G  I+SASRDK+ K+W+                   + 
Sbjct: 182 FECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR 241
Query: 45  PGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKT--- 101
           P      + S S D T ++W + +++CK  +R+H   V   I  A     +  ++ T   
Sbjct: 242 PNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVV-ECISWAPESSYSSISEATGSE 300
Query: 102 IKLHSEEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPN 161
            K   + G FL                     +S S D +I++WD +TG C+ T+ GH N
Sbjct: 301 TKKSGKPGPFL---------------------LSGSRDKTIKMWDVSTGMCLMTLVGHDN 339
Query: 162 FIYSVAAH--GDLITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILPNSD----IVTGS 215
           ++  V  H  G  I S  +D+ + V+  K +            V  L        +VTGS
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 216 SDGIVRVFSAN 226
            D  V+V+   
Sbjct: 400 VDQTVKVWECR 410

>pdb|1VYH|C Chain C, Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 78/142 (54%), Gaps = 12/142 (8%)
Query: 92  IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTDFV-SCSNDASIRVWDSTT 149
           ++V+   D TIK+   E G+F +TL GHTD V+ ++  +    + SCS D +I++WD   
Sbjct: 122 VMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG 181
Query: 150 GKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQNSFMIPAMS---VWAVA 204
            +C+ TM+GH + + SV+   +GD I S   D+ + +++   Q  + +   +    W   
Sbjct: 182 FECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWE--VQTGYCVKTFTGHREWVRM 239
Query: 205 ILPNSD---IVTGSSDGIVRVF 223
           + PN D   I + S+D  VRV+
Sbjct: 240 VRPNQDGTLIASCSNDQTVRVW 261

>pdb|3DM0|A Chain A, Maltose Binding Protein Fusion With Rack1 From A. Thaliana Length = 694

Iteration: 1
 Score = 70.1 bits (170), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 74/265 (27%), Positives = 114/265 (43%), Gaps = 35/265 (13%)
Query: 4   LSTALYGHSMDVRSLSVTPDGC--ILSASRDKSAKLWK--PNDLSPGAKVNTL------- 52
           L   +  H+  V +++   D    I+SASRDKS  LWK   +D + G     L       
Sbjct: 374 LKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFV 433
Query: 53  ------------LSASWDMTAKLWCLESQQCKLTIRQHEMAVWGV-IQLANGIIVTGCAD 99
                       LS SWD   +LW L +         H   V  V   L N  IV+   D
Sbjct: 434 EDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRD 493
Query: 100 KTIKLHSEEGEFLKTLT----GHTD---CVRGLAVLNDTDFVSCSNDASIRVWDSTTGKC 152
           +TIKL +  GE   T++    GH D   CVR          VS S D +++VW+ +  K 
Sbjct: 494 RTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKL 553
Query: 153 VHTMYGHPNFIYSVAAH--GDLITSGGEDQCVCVYQ-NKAQNSFMIPAMSVW-AVAILPN 208
             T+ GH  ++ +VA    G L  SGG+D  V ++   + +  + + A SV  A+   PN
Sbjct: 554 RSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCFSPN 613
Query: 209 SDIVTGSSDGIVRVFSANPDRQAED 233
              +  +++  ++++        ED
Sbjct: 614 RYWLCAATEHGIKIWDLESKSIVED 638

>pdb|1P22|A Chain A, Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex: Destruction Motif Binding And Lysine Specificity On The Scfbeta-Trcp1 Ubiquitin Ligase Length = 435

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 64/278 (23%), Positives = 115/278 (41%), Gaps = 28/278 (10%)
Query: 26  ILSASRDKSAKLWKPNDLSPGAKV--------------NTLLSASWDMTAKLWCLESQQC 71
           I+S  RD + K+W  N L     +                +++ S D T ++W + + + 
Sbjct: 146 IVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEM 205
Query: 72  KLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHS----EEGEFLKTLTGHTDCVRGLAV 127
             T+  H  AV   ++  NG++VT   D++I +       +    + L GH   V  +  
Sbjct: 206 LNTLIHHCEAVLH-LRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAV-NVVD 263
Query: 128 LNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQN 187
            +D   VS S D +I+VW+++T + V T+ GH   I  +     L+ SG  D  + ++  
Sbjct: 264 FDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDI 323
Query: 188 KAQNSFMIPAMSVWAVAILP--NSDIVTGSSDGIVRVF----SANPDRQAEDAVQAQYAE 241
           +      +       V  +   N  IV+G+ DG ++V+    + +P   A         E
Sbjct: 324 ECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVE 383
Query: 242 EVKKLKSANEQEIGGVKVSDDGIVRV--FSANPDRQAE 277
              ++      E   V  S D  + +  F  +P  QAE
Sbjct: 384 HSGRVFRLQFDEFQIVSSSHDDTILIWDFLNDPAAQAE 421

>pdb|4AOW|A Chain A, Crystal Structure Of The Human Rack1 Protein At A Resolution Of 2.45 Angstrom Length = 340

Iteration: 1
 Score = 58.9 bits (141), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 85/207 (41%), Gaps = 31/207 (14%)
Query: 4   LSTALYGHSMDVRSLSVTPD--GCILSASRDKSAKLWK---------------------P 40
           L   L GH+  V  ++ TP     ILSASRDK+  +WK                      
Sbjct: 30  LRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFV 89
Query: 41  NDLSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGV-IQLANGIIVTGCAD 99
           +D+   +     LS SWD T +LW L +         H   V  V     N  IV+G  D
Sbjct: 90  SDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 149
Query: 100 KTIKLHSEEGEFLKTLTGHT-----DCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVH 154
           KTIKL +  G    T+   +      CVR     ++   VSC  D  ++VW+    K   
Sbjct: 150 KTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKT 209
Query: 155 TMYGHPNFI--YSVAAHGDLITSGGED 179
              GH  ++   +V+  G L  SGG+D
Sbjct: 210 NHIGHTGYLNTVTVSPDGSLCASGGKD 236

>pdb|4AOW|A Chain A, Crystal Structure Of The Human Rack1 Protein At A Resolution Of 2.45 Angstrom Length = 340

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 71/149 (47%), Gaps = 16/149 (10%)
Query: 92  IIVTGCADKTI---KLHSEEGEF---LKTLTGHTDCVRGLAVLNDTDF-VSCSNDASIRV 144
           +I++   DKTI   KL  +E  +    + L GH+  V  + + +D  F +S S D ++R+
Sbjct: 53  MILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRL 112
Query: 145 WDSTTGKCVHTMYGHPNFIYSVAAHGD--LITSGGEDQCVCVYQNKAQNSFMI--PAMSV 200
           WD TTG       GH   + SVA   D   I SG  D+ + ++       + +   + S 
Sbjct: 113 WDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSE 172
Query: 201 W--AVAILPNSD---IVTGSSDGIVRVFS 224
           W   V   PNS    IV+   D +V+V++
Sbjct: 173 WVSCVRFSPNSSNPIIVSCGWDKLVKVWN 201

>pdb|2ZKQ|AA Chain a, Structure Of A Mammalian Ribosomal 40s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-Em Map Length = 317

Iteration: 1
 Score = 58.5 bits (140), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 85/207 (41%), Gaps = 31/207 (14%)
Query: 4   LSTALYGHSMDVRSLSVTPD--GCILSASRDKSAKLWK---------------------P 40
           L   L GH+  V  ++ TP     ILSASRDK+  +WK                      
Sbjct: 7   LRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFV 66
Query: 41  NDLSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGV-IQLANGIIVTGCAD 99
           +D+   +     LS SWD T +LW L +         H   V  V     N  IV+G  D
Sbjct: 67  SDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 126
Query: 100 KTIKLHSEEGEFLKTLTGHT-----DCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVH 154
           KTIKL +  G    T+   +      CVR     ++   VSC  D  ++VW+    K   
Sbjct: 127 KTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKT 186
Query: 155 TMYGHPNFI--YSVAAHGDLITSGGED 179
              GH  ++   +V+  G L  SGG+D
Sbjct: 187 NHIGHTGYLNTVTVSPDGSLCASGGKD 213

>pdb|2ZKQ|AA Chain a, Structure Of A Mammalian Ribosomal 40s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-Em Map Length = 317

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 71/149 (47%), Gaps = 16/149 (10%)
Query: 92  IIVTGCADKTI---KLHSEEGEF---LKTLTGHTDCVRGLAVLNDTDF-VSCSNDASIRV 144
           +I++   DKTI   KL  +E  +    + L GH+  V  + + +D  F +S S D ++R+
Sbjct: 30  MILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRL 89
Query: 145 WDSTTGKCVHTMYGHPNFIYSVAAHGD--LITSGGEDQCVCVYQNKAQNSFMI--PAMSV 200
           WD TTG       GH   + SVA   D   I SG  D+ + ++       + +   + S 
Sbjct: 90  WDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSE 149
Query: 201 W--AVAILPNSD---IVTGSSDGIVRVFS 224
           W   V   PNS    IV+   D +V+V++
Sbjct: 150 WVSCVRFSPNSSNPIIVSCGWDKLVKVWN 178

>pdb|3SHF|A Chain A, Crystal Structure Of The R265s Mutant Of Full-Length Murine Apaf-1 Length = 1256

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 88/172 (51%), Gaps = 14/172 (8%)
Query: 72  KLTIRQHEMAVWGVIQLANGIIVTGC-ADKTIKLH-SEEGEFLKTLTGHTDCVRGLAVLN 129
           +L +R H  AV+      +G  +  C ADKT+++  +E GE L  +  H D V   A  +
Sbjct: 615 RLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSS 674
Query: 130 DTDFV-SCSNDASIRVWDSTTGKCVHTMYGHPNFI----YSVAAHGDLITSGGEDQCVCV 184
           D  ++ +CS D  +++WDS TGK VHT   H   +    ++  ++  L+ +G  D  + +
Sbjct: 675 DDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKL 734
Query: 185 Y---QNKAQNSFMIPAMSVWAVAILPNSDIV-TGSSDGIVRVF---SANPDR 229
           +   Q + +N+      SV      P+ +++ + S+DG +R++   SAN  +
Sbjct: 735 WDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERK 786

>pdb|1NEX|B Chain B, Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Complex Length = 464

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 46/222 (20%), Positives = 90/222 (40%), Gaps = 46/222 (20%)
Query: 50  NTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHS-EE 108
           N +++ + D   +++   +++  L +  H+  VW +     GI+V+G  D+T+++   ++
Sbjct: 133 NYVITGADDKXIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKK 192
Query: 109 GEFLKTLTGHTDCVRGLAVL---NDTDFVSCSNDASIRVWDSTTGKCV------------ 153
           G       GH   VR L ++   N    V+ S D ++ VW       V            
Sbjct: 193 GCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLV 252
Query: 154 -HT----------MYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQNSFMIPAMSVWA 202
            HT          + GH   + +V+ HG+++ SG  D                  + VW 
Sbjct: 253 FHTPEENPYFVGVLRGHXASVRTVSGHGNIVVSGSYDN----------------TLIVWD 296
Query: 203 VAILPNSDIVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVK 244
           VA      I++G +D   R++S   D + +  + A     ++
Sbjct: 297 VAQXKCLYILSGHTD---RIYSTIYDHERKRCISASXDTTIR 335

>pdb|3SFZ|A Chain A, Crystal Structure Of Full-Length Murine Apaf-1 Length = 1249

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 88/172 (51%), Gaps = 14/172 (8%)
Query: 72  KLTIRQHEMAVWGVIQLANGIIVTGC-ADKTIKLH-SEEGEFLKTLTGHTDCVRGLAVLN 129
           +L +R H  AV+      +G  +  C ADKT+++  +E GE L  +  H D V   A  +
Sbjct: 608 RLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSS 667
Query: 130 DTDFV-SCSNDASIRVWDSTTGKCVHTMYGHPNFI----YSVAAHGDLITSGGEDQCVCV 184
           D  ++ +CS D  +++WDS TGK VHT   H   +    ++  ++  L+ +G  D  + +
Sbjct: 668 DDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKL 727
Query: 185 Y---QNKAQNSFMIPAMSVWAVAILPNSDIV-TGSSDGIVRVF---SANPDR 229
           +   Q + +N+      SV      P+ +++ + S+DG +R++   SAN  +
Sbjct: 728 WDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERK 779

>pdb|3MKS|B Chain B, Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH AN ALLOSTERIC Inhibitor Scf-I2 Length = 464

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/222 (20%), Positives = 91/222 (40%), Gaps = 46/222 (20%)
Query: 50  NTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHS-EE 108
           N +++ + D   +++   +++  L +  H+  VW +     GI+V+G  D+T+++   ++
Sbjct: 133 NYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKK 192
Query: 109 GEFLKTLTGHTDCVRGLAVL---NDTDFVSCSNDASIRVWDSTTGKCV------------ 153
           G       GH   VR L ++   N    V+ S D ++ VW       V            
Sbjct: 193 GCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLV 252
Query: 154 -HT----------MYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQNSFMIPAMSVWA 202
            HT          + GH   + +V+ HG+++ SG  D  +                 VW 
Sbjct: 253 FHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLI----------------VWD 296
Query: 203 VAILPNSDIVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVK 244
           VA +    I++G +D   R++S   D + +  + A     ++
Sbjct: 297 VAQMKCLYILSGHTD---RIYSTIYDHERKRCISASMDTTIR 335

>pdb|3MKQ|A Chain A, Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subcomplex Of The Copi Vesicular Coat Length = 814

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 21/173 (12%)
Query: 52  LLSASWDMTAKLWCLESQ-QCKLTIRQHEMAVWGVIQLAN--GIIVTGCADKTIKLHSEE 108
           +LS S D+T KLW  E+    + T   HE  V  V           +GC D+T+K+ S  
Sbjct: 112 VLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSL- 170
Query: 109 GEFLKTLTGHTDCVRGLAVLNDTDF---------VSCSNDASIRVWDSTTGKCVHTMYGH 159
           G+     T  T   RG+   N  D+         ++ S+D +I++WD  T  CV T+ GH
Sbjct: 171 GQSTPNFTLTTGQERGV---NYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGH 227
Query: 160 PNFIYSVAAHGDL--ITSGGEDQCVCVYQN---KAQNSFMIPAMSVWAVAILP 207
            + +     H  L  I SG ED  + ++ +   K + +  +     W +A  P
Sbjct: 228 MSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHP 280

>pdb|2YNP|A Chain A, Yeast Betaprime Cop 1-604 With Ktktn Motif Length = 604

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 21/173 (12%)
Query: 52  LLSASWDMTAKLWCLESQ-QCKLTIRQHEMAVWGVIQLAN--GIIVTGCADKTIKLHSEE 108
           +LS S D+T KLW  E+    + T   HE  V  V           +GC D+T+K+ S  
Sbjct: 112 VLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSL- 170
Query: 109 GEFLKTLTGHTDCVRGLAVLNDTDF---------VSCSNDASIRVWDSTTGKCVHTMYGH 159
           G+     T  T   RG+   N  D+         ++ S+D +I++WD  T  CV T+ GH
Sbjct: 171 GQSTPNFTLTTGQERGV---NYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGH 227
Query: 160 PNFIYSVAAHGDL--ITSGGEDQCVCVYQN---KAQNSFMIPAMSVWAVAILP 207
            + +     H  L  I SG ED  + ++ +   K + +  +     W +A  P
Sbjct: 228 MSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHP 280

>pdb|2YNO|A Chain A, Yeast Betaprime Cop 1-304h6 Length = 310

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 83/185 (44%), Gaps = 18/185 (9%)
Query: 52  LLSASWDMTAKLWCLESQ-QCKLTIRQHEMAVWGVIQLAN--GIIVTGCADKTIKLHSEE 108
           +LS S D+T KLW  E+    + T   HE  V  V           +GC D+T+K+ S  
Sbjct: 112 VLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSL- 170
Query: 109 GEFLKTLTGHTDCVRGLAVLN-----DTDF-VSCSNDASIRVWDSTTGKCVHTMYGHPNF 162
           G+     T  T   RG+  ++     D  + ++ S+D +I++WD  T  CV T+ GH + 
Sbjct: 171 GQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSN 230
Query: 163 IYSVAAHGDL--ITSGGEDQCVCVYQN---KAQNSFMIPAMSVWAVAILPNSD---IVTG 214
           +     H  L  I SG ED  + ++ +   K + +  +     W +A  P      I +G
Sbjct: 231 VSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASG 290
Query: 215 SSDGI 219
             +G 
Sbjct: 291 FDNGF 295

>pdb|2YNN|A Chain A, Yeast Betaprime Cop 1-304 With Ktktn Motif Length = 304

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 83/185 (44%), Gaps = 18/185 (9%)
Query: 52  LLSASWDMTAKLWCLESQ-QCKLTIRQHEMAVWGVIQLAN--GIIVTGCADKTIKLHSEE 108
           +LS S D+T KLW  E+    + T   HE  V  V           +GC D+T+K+ S  
Sbjct: 112 VLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSL- 170
Query: 109 GEFLKTLTGHTDCVRGLAVLN-----DTDF-VSCSNDASIRVWDSTTGKCVHTMYGHPNF 162
           G+     T  T   RG+  ++     D  + ++ S+D +I++WD  T  CV T+ GH + 
Sbjct: 171 GQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSN 230
Query: 163 IYSVAAHGDL--ITSGGEDQCVCVYQN---KAQNSFMIPAMSVWAVAILPNSD---IVTG 214
           +     H  L  I SG ED  + ++ +   K + +  +     W +A  P      I +G
Sbjct: 231 VSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASG 290
Query: 215 SSDGI 219
             +G 
Sbjct: 291 FDNGF 295

>pdb|3FM0|A Chain A, Crystal Structure Of Wd40 Protein Ciao1 Length = 345

Iteration: 1
 Score = 52.4 bits (124), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 56/223 (25%), Positives = 94/223 (42%), Gaps = 47/223 (21%)
Query: 2   YKLSTALYGHSMDVRSLSVTPDGCIL-SASRDKSAKLWKPNDLSPGAKVNTLLSASWDMT 60
           ++  T L GH  +V+S++  P G +L + SRDKS  +W+ ++      V+ L S + D+ 
Sbjct: 95  FECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVK 154
Query: 61  AKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGE---FLKTLTG 117
             +W                        +  ++ +   D T+KL+ EE +      TL G
Sbjct: 155 HVVW----------------------HPSQELLASASYDDTVKLYREEEDDWVCCATLEG 192
Query: 118 HTDCVRGLAV-LNDTDFVSCSNDASIRVW---------------DSTTGKCVHTMYG-HP 160
           H   V  LA   +     SCS+D ++R+W                  + KC+ T+ G H 
Sbjct: 193 HESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHS 252
Query: 161 NFIYSVA---AHGDLITSGGEDQCVCVYQNKAQNSFMIPAMSV 200
             IY +A     G L T+ G+D  + V+Q    +    P  S+
Sbjct: 253 RTIYDIAWCQLTGALATACGDDA-IRVFQEDPNSDPQQPTFSL 294

>pdb|2XZM|R Chain R, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit In Complex With Initiation Factor 1. This File Contains The 40s Subunit And Initiation Factor For Molecule 1 Length = 343

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/200 (23%), Positives = 86/200 (43%), Gaps = 41/200 (20%)
Query: 26  ILSASRDKSAKLWK-----------------------PNDLSPGAKVNTLLSASWDMTAK 62
           ++S SRDK+  +WK                        +DL+   +    +S+SWD T +
Sbjct: 42  LISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLR 101
Query: 63  LWCLESQQCKLTIRQHEMAVWGV-IQLANGIIVTGCADKTIKLHSEEGEFLKTLT---GH 118
           LW L +         H+  V+ V     N  I++  A++ IKL +  GE   +      H
Sbjct: 102 LWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENH 161
Query: 119 TD---CVRGLAVLNDTD--------FVSCSNDASIRVWDSTTGKCVHTMYGHPNFI--YS 165
           +D   CVR   ++   +        F S   D  ++VW+ T  +  +T   H + +   S
Sbjct: 162 SDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLS 220
Query: 166 VAAHGDLITSGGEDQCVCVY 185
           ++ +G  I +GG+D+ + ++
Sbjct: 221 ISPNGKYIATGGKDKKLLIW 240

>pdb|1ERJ|A Chain A, Crystal Structure Of The C-Terminal Wd40 Domain Of Tup1 Length = 393

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 85/209 (40%), Gaps = 49/209 (23%)
Query: 3   KLSTALYGHSMDVRSLSVTPDG-CILSASRDKSAKLWKPNDLSPGAKVNTL--------- 52
           K+   L GH  D+ SL   P G  ++S S D++ ++W   DL  G    TL         
Sbjct: 156 KIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIW---DLRTGQCSLTLSIEDGVTTV 212
Query: 53  ----------LSASWDMTAKLWCLESQQCKLTIR---------QHEMAVWGVIQLANG-I 92
                      + S D   ++W  +S+   L  R          H+ +V+ V+   +G  
Sbjct: 213 AVSPGDGKYIAAGSLDRAVRVW--DSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQS 270
Query: 93  IVTGCADKTIKLHS-------------EEGEFLKTLTGHTDCVRGLAVL-NDTDFVSCSN 138
           +V+G  D+++KL +               G    T  GH D V  +A   ND   +S S 
Sbjct: 271 VVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSK 330
Query: 139 DASIRVWDSTTGKCVHTMYGHPNFIYSVA 167
           D  +  WD  +G  +  + GH N + SVA
Sbjct: 331 DRGVLFWDKKSGNPLLMLQGHRNSVISVA 359

>pdb|1ERJ|A Chain A, Crystal Structure Of The C-Terminal Wd40 Domain Of Tup1 Length = 393

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/163 (26%), Positives = 81/163 (49%), Gaps = 16/163 (9%)
Query: 43  LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKT 101
            SP  K   L + + D   ++W +E+++  + ++ HE  ++ +    +G  +V+G  D+T
Sbjct: 131 FSPDGKF--LATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRT 188
Query: 102 IKL-HSEEGEFLKTLTGHTDCVRGLAVL-NDTDFVSC-SNDASIRVWDSTTGKCVHTM-- 156
           +++     G+   TL+   D V  +AV   D  +++  S D ++RVWDS TG  V  +  
Sbjct: 189 VRIWDLRTGQCSLTLSIE-DGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDS 247
Query: 157 -----YGHPNFIYSV--AAHGDLITSGGEDQCVCVYQNKAQNS 192
                 GH + +YSV     G  + SG  D+ V ++  +  N+
Sbjct: 248 ENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANN 290

>pdb|2PBI|B Chain B, The Multifunctional Nature Of Gbeta5RGS9 REVEALED FROM ITS CRYSTAL Structure Length = 354

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 81/208 (38%), Gaps = 26/208 (12%)
Query: 3   KLSTALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPN------------------DLS 44
           K S A++ + +   S +   D  IL+AS D +  LW                     DL+
Sbjct: 147 KKSVAMHTNYLSACSFT-NSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLA 205
Query: 45  PGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIK 103
           P    NT +S   D  A +W + S QC      HE  V  V    +G    +G  D T +
Sbjct: 206 PSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCR 265
Query: 104 LHSEEGEFLKTLTGHTDCVRGLA----VLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGH 159
           L+    +    +      + G +     L+     +  ND +I VWD   G  V  ++GH
Sbjct: 266 LYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGH 325
Query: 160 PNFIYS--VAAHGDLITSGGEDQCVCVY 185
            N + +  V+  G    SG  D  + V+
Sbjct: 326 ENRVSTLRVSPDGTAFCSGSWDHTLRVW 353

>pdb|3OW8|A Chain A, Crystal Structure Of The Wd Repeat-Containing Protein 61 Length = 321

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/98 (36%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Query: 92  IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVL-NDTDFVSCSNDASIRVWDSTT 149
           ++VT   D  IK++  +      TL+GH   V  +A   +DT FVS S+D S++VWD  T
Sbjct: 220 LLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGT 279
Query: 150 GKCVHTMYGHPNFIYSVA--AHGDLITSGGEDQCVCVY 185
             CVHT + H + ++ V    +G  I S G+DQ + +Y
Sbjct: 280 RTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIY 317

>pdb|1PI6|A Chain A, Yeast Actin Interacting Protein 1 (Aip1), Orthorhombic Crystal Form Length = 615

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 92  IIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRG----LAVLNDTDFVSCSNDASIRVWDS 147
           +I  G   K      + GEFLK +    + V+G    L+ L+   F +   DA+IRVWD 
Sbjct: 222 VITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDV 281
Query: 148 TTGKCVH 154
           TT KCV 
Sbjct: 282 TTSKCVQ 288

>pdb|1PGU|A Chain A, Yeast Actin Interacting Protein 1 (aip1), Se-met Protein, Monoclinic Crystal Form Length = 615

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 92  IIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRG----LAVLNDTDFVSCSNDASIRVWDS 147
           +I  G   K      + GEFLK +    + V+G    L+ L+   F +   DA+IRVWD 
Sbjct: 222 VITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDV 281
Query: 148 TTGKCVH 154
           TT KCV 
Sbjct: 282 TTSKCVQ 288

>pdb|2PM6|B Chain B, Crystal Structure Of Yeast Sec1331 EDGE ELEMENT OF THE Copii Vesicular Coat, Native Version Length = 297

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 71/169 (42%), Gaps = 31/169 (18%)
Query: 93  IVTGCADKTIKLHSEEGE---FLKTLTGHTDCVRGLAVLN---DTDFVSCSNDASIRVWD 146
           + T  +DKTIK+   EGE    + TLTGH   V  +   +    T   SCS D  + +W 
Sbjct: 24  LATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWK 83
Query: 147 STTGK----CVHTMYGHPNFIYSVAAH--GDLI---TSGGEDQCVCVYQNKAQNSFMIPA 197
              G+     VH ++         A H  G L+   +S G+   V   +N   +  +I A
Sbjct: 84  EENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDA 143
Query: 198 MSV------WAVAILP----------NSDIVTGSSDGIVRVFSANPDRQ 230
            ++      WA A +           +   VTG +D +V+++  N D Q
Sbjct: 144 HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQ 192

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	557
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	100.0
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	100.0
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	100.0
3ow8_A	321	WD repeat-containing protein 61; structural genomi	100.0
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	100.0
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	100.0
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	100.0
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	100.0
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	100.0
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	100.0
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	100.0
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	100.0
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	100.0
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	100.0
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	100.0
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	100.0
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	100.0
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	100.0
3ow8_A	321	WD repeat-containing protein 61; structural genomi	100.0
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	100.0
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	100.0
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	100.0
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	100.0
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	100.0
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	100.0
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	100.0
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	100.0
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	100.0
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	100.0
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	100.0
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	100.0
2pm7_B	297	Protein transport protein SEC13, protein transport	100.0
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	100.0
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	100.0
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	100.0
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	100.0
3pst_A	425	Protein DOA1; protein degradation, CDC48, ubiquiti	100.0
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	100.0
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	100.0
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	100.0
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	100.0
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	100.0
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	100.0
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	100.0
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	99.98
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	99.98
2k89_A	80	PLA2P, PLAP, phospholipase A-2-activating protein;	99.98
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	99.98
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	99.98
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	99.98
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	99.98
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	99.97
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	99.97
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	99.97
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	99.97
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	99.97
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	99.97
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	99.97
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	99.97
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	99.97
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	99.97
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	99.97
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	99.97
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	99.97
3jrp_A	379	Fusion protein of protein transport protein SEC13	99.97
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	99.97
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	99.97
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	99.97
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	99.97
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	99.97
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	99.97
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	99.97
2pm7_B	297	Protein transport protein SEC13, protein transport	99.97
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	99.97
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	99.97
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	99.97
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	99.96
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	99.96
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	99.96
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	99.96
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	99.96
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	99.96
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	99.96
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	99.96
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	99.96
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	99.96
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	99.96
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	99.96
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	99.96
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	99.96
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	99.96
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	99.96
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	99.96
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	99.96
3jro_A	753	Fusion protein of protein transport protein SEC13	99.96
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	99.95
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	99.95
3l3f_X	362	Protein DOA1, DOA1/UFD3; armadillo-like repeat str	99.95
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	99.95
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	99.95
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	99.95
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	99.95
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	99.95
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	99.95
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	99.95
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	99.95
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	99.95
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	99.95
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	99.95
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	99.95
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	99.94
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	99.94
3jrp_A	379	Fusion protein of protein transport protein SEC13	99.94
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	99.94
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	99.93
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	99.93
3jro_A	753	Fusion protein of protein transport protein SEC13	99.93
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	99.93
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	99.93
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	99.93
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	99.93
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	99.92
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	99.92
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	99.92
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	99.92
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	99.91
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	99.89
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	99.89
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	99.89
2k89_A	80	PLA2P, PLAP, phospholipase A-2-activating protein;	99.88
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	99.86
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	99.85
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	99.83
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	99.78
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.77
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.77
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.77
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.74
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.74
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	99.74
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	99.73
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.72
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.72
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.71
1k32_A	1045	Tricorn protease; protein degradation, substrate g	99.71
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.7
1k32_A	1045	Tricorn protease; protein degradation, substrate g	99.69
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	99.69
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.69
3l3f_X	362	Protein DOA1, DOA1/UFD3; armadillo-like repeat str	99.68
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.68
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.68
3pst_A	425	Protein DOA1; protein degradation, CDC48, ubiquiti	99.68
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.67
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.67
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.66
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.66
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	99.66
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.65
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	99.65
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	99.62
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.61
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	99.61
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	99.58
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.57
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	99.57
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	99.56
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	99.56
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	99.55
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.53
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	99.49
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	99.49
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	99.47
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	99.47
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	99.47
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	99.45
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	99.42
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	99.38
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	99.38
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	99.38
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	99.37
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	99.36
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	99.35
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	99.34
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	99.33
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	99.32
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	99.32
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	99.32
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	99.31
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	99.29
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	99.29
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	99.28
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	99.25
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	99.25
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	99.22
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	99.2
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	99.2
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	99.2
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	99.19
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	99.16
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	99.15
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	99.14
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	99.13
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	99.11
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	99.07
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	99.06
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	99.03
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	98.99
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	98.98
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	98.97
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	98.96
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	98.96
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	98.94
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	98.93
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	98.93
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	98.91
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	98.88
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	98.86
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	98.82
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	98.82
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	98.81
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	98.79
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	98.74
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	98.69
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	98.69
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	98.62
2qe8_A	343	Uncharacterized protein; structural genomics, join	98.55
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	98.54
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	98.54
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	98.52
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	98.48
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	98.46
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	98.45
4a2l_A	795	BT_4663, two-component system sensor histidine kin	98.43
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	98.42
4a2l_A	795	BT_4663, two-component system sensor histidine kin	98.4
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	98.38
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	98.24
2qe8_A	343	Uncharacterized protein; structural genomics, join	98.24
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	98.22
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	98.2
3v9f_A	781	Two-component system sensor histidine kinase/RESP	98.19
3v9f_A	781	Two-component system sensor histidine kinase/RESP	98.19
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	98.13
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	98.12
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	98.05
2ece_A	462	462AA long hypothetical selenium-binding protein;	98.05
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	98.04
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	97.97
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	97.97
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	97.95
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	97.95
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	97.94
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	97.93
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	97.9
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	97.87
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	97.86
2ece_A	462	462AA long hypothetical selenium-binding protein;	97.85
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	97.82
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	97.75
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	97.7
2p4o_A	306	Hypothetical protein; putative lactonase, structur	97.7
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	97.65
2xbg_A	327	YCF48-like protein; photosynthesis, photosystem II	97.64
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	97.47
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	97.42
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	97.38
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	97.34
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	97.25
2ism_A	352	Putative oxidoreductase; BL41XU spring-8, bladed b	97.19
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	97.17
3v65_B	386	Low-density lipoprotein receptor-related protein;	97.16
2p4o_A	306	Hypothetical protein; putative lactonase, structur	97.15
3v65_B	386	Low-density lipoprotein receptor-related protein;	97.12
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	97.06
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	97.03
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	97.02
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	97.0
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	96.98
2xbg_A	327	YCF48-like protein; photosynthesis, photosystem II	96.96
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	96.94
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	96.93
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	96.84
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	96.75
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	96.72
3ott_A	758	Two-component system sensor histidine kinase; beta	96.68
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	96.66
3ott_A	758	Two-component system sensor histidine kinase; beta	96.64
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	96.63
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	96.5
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	96.49
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	96.47
3a9g_A	354	Putative uncharacterized protein; PQQ dependent de	96.38
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	96.35
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	96.21
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	96.19
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	96.19
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	96.19
2g8s_A	353	Glucose/sorbosone dehydrogenases; bladed beta-prop	96.14
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	96.13
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	96.04
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	95.88
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	95.69
3ei3_A	1158	DNA damage-binding protein 1; UV-damage, DDB, nucl	95.51
3kya_A	496	Putative phosphatase; structural genomics, joint c	95.26
3kya_A	496	Putative phosphatase; structural genomics, joint c	95.01
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	94.85
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	94.22
3sre_A	355	PON1, serum paraoxonase; directed evolution, 6-bla	94.2
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	94.01
3ei3_A	1158	DNA damage-binding protein 1; UV-damage, DDB, nucl	93.98
2be1_A	339	Serine/threonine-protein kinase/endoribonuclease;	93.71
3das_A	347	Putative oxidoreductase; aldose sugar dehydrogenas	93.58
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	93.53
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	93.31
2xzh_A	365	Clathrin heavy chain 1; endocytosis, endocytosis i	92.99
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	92.88
1tl2_A	236	L10, protein (tachylectin-2); animal lectin, horse	92.6
1bpo_A	494	Protein (clathrin); clathrin endocytosis beta-prop	91.91
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	91.42
3sre_A	355	PON1, serum paraoxonase; directed evolution, 6-bla	91.3
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	91.08
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	91.07
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	90.02
1xi4_A	1630	Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle	90.01
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	89.91
2xzh_A	365	Clathrin heavy chain 1; endocytosis, endocytosis i	89.65
2ism_A	352	Putative oxidoreductase; BL41XU spring-8, bladed b	89.32
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	89.17
1bpo_A	494	Protein (clathrin); clathrin endocytosis beta-prop	89.01
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	88.96
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	87.73
3qhy_B	282	Beta-lactamase inhibitory protein II; enyzme-inhib	87.66
3a9g_A	354	Putative uncharacterized protein; PQQ dependent de	86.82
1cru_A	454	Protein (soluble quinoprotein glucose dehydrogena;	86.73
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	85.81
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	85.54
1xi4_A	1630	Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle	85.47
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	85.41
1tl2_A	236	L10, protein (tachylectin-2); animal lectin, horse	85.11
2be1_A	339	Serine/threonine-protein kinase/endoribonuclease;	84.19

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=100.00  E-value=4.9e-38  Score=330.30  Aligned_cols=262  Identities=28%  Similarity=0.385  Sum_probs=237.2

Q ss_pred             EEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEECCC
Q psy7057           6 TALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCLES   68 (557)
Q Consensus         6 ~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~~~   68 (557)
                      ..|.+|.++|++++|+|++. |++|+.||+|++||+.+                +++++++.+|++|+.|++|++||+.+
T Consensus       102 ~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~  181 (410)
T 1vyh_C          102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG  181 (410)
T ss_dssp             CEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTS
T ss_pred             EeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Confidence            46789999999999999998 89999999999999876                56778899999999999999999999


Q ss_pred             CeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEEEE
Q psy7057          69 QQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVW  145 (557)
Q Consensus        69 ~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vw  145 (557)
                      ++++.++.+|...|.+++|+|++ .|++|+.|++|++|| .++.++..+.+|...|.++.++|++. +++|+.|++|++|
T Consensus       182 ~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vw  261 (410)
T 1vyh_C          182 FECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW  261 (410)
T ss_dssp             SCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred             CceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEE
Confidence            99999999999999999999988 999999999999999 57788999999999999999999977 6799999999999


Q ss_pred             ECCCCeEEEEEeCCCCcEEEEEEc----------------------CCEEEEEeCCCeEEEEECCCC---ceEeeCCccE
Q psy7057         146 DSTTGKCVHTMYGHPNFIYSVAAH----------------------GDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSV  200 (557)
Q Consensus       146 d~~~~~~~~~~~~h~~~V~~l~~~----------------------~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v  200 (557)
                      |++++++...+.+|...|.+++|.                      +.+|++|+.|++|++||+++.   ..+..|...|
T Consensus       262 d~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v  341 (410)
T 1vyh_C          262 VVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWV  341 (410)
T ss_dssp             ETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCE
T ss_pred             ECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcE
Confidence            999999999999999999999993                      458999999999999998766   5667799999


Q ss_pred             EEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEec
Q psy7057         201 WAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSA  270 (557)
Q Consensus       201 ~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~  270 (557)
                      ++++|+|++. |++|+.|++|++||+.+.+...  ....|...+..+.+.+... .+++||.||+|+||++
T Consensus       342 ~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~--~~~~h~~~v~~l~~~~~~~-~l~sgs~D~~i~vW~~  409 (410)
T 1vyh_C          342 RGVLFHSGGKFILSCADDKTLRVWDYKNKRCMK--TLNAHEHFVTSLDFHKTAP-YVVTGSVDQTVKVWEC  409 (410)
T ss_dssp             EEEEECSSSSCEEEEETTTEEEEECCTTSCCCE--EEECCSSCEEEEEECSSSS-CEEEEETTSEEEEEC-
T ss_pred             EEEEEcCCCCEEEEEeCCCeEEEEECCCCceEE--EEcCCCCcEEEEEEcCCCC-EEEEEeCCCcEEEEeC
Confidence            9999999998 9999999999999998766542  2346777899998887665 5899999999999985

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=100.00  E-value=2e-37  Score=316.99  Aligned_cols=265  Identities=24%  Similarity=0.336  Sum_probs=234.0

Q ss_pred             cEEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEE
Q psy7057           2 YKLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLW   64 (557)
Q Consensus         2 ~kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iw   64 (557)
                      .+..++|.+|.+.|++++|+|+++ |++|+.||+|++||+.+                +.+++++.+|++|+.|+.+++|
T Consensus        45 ~~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw  124 (340)
T 1got_B           45 MRTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIY  124 (340)
T ss_dssp             CCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEE
T ss_pred             chhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEE
Confidence            456789999999999999999998 88999999999999865                5678889999999999999999


Q ss_pred             ECCCC----eEEEEEcccCCcEEEEEEcCCCEEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEEC
Q psy7057          65 CLESQ----QCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSN  138 (557)
Q Consensus        65 d~~~~----~~~~~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~  138 (557)
                      ++.+.    .....+.+|...|.++.|++++.+++++.|++|++|| .++.++..+.+|...|.+++|+|++. +++|+.
T Consensus       125 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~  204 (340)
T 1got_B          125 NLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGAC  204 (340)
T ss_dssp             ETTTCSBSCEEEEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred             ECccCCCcceeEEEecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeC
Confidence            99875    4667788999999999999999999999999999999 56788899999999999999999976 779999


Q ss_pred             CCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCCceEe--e---CCccEEEEEEcCCCc-
Q psy7057         139 DASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQNSFM--I---PAMSVWAVAILPNSD-  210 (557)
Q Consensus       139 Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~~~~~--~---~~~~v~~v~~~p~g~-  210 (557)
                      |++|++||+++++++.++.+|...|.+++|  ++++|++|+.|++|++||++....+.  .   +...|.+++|+|++. 
T Consensus       205 d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~  284 (340)
T 1got_B          205 DASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRL  284 (340)
T ss_dssp             TSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSE
T ss_pred             CCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCE
Confidence            999999999999999999999999999999  67899999999999999988763332  1   224799999999999 


Q ss_pred             EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEe
Q psy7057         211 IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFS  269 (557)
Q Consensus       211 l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~  269 (557)
                      +++|+.|+.|++||+.......  ....|...+..+.+.+... .++++|.||+|+||+
T Consensus       285 l~~g~~d~~i~vwd~~~~~~~~--~~~~h~~~v~~~~~s~dg~-~l~s~s~D~~i~iWd  340 (340)
T 1got_B          285 LLAGYDDFNCNVWDALKADRAG--VLAGHDNRVSCLGVTDDGM-AVATGSWDSFLKIWN  340 (340)
T ss_dssp             EEEEETTSEEEEEETTTCCEEE--EEECCSSCEEEEEECTTSS-CEEEEETTSCEEEEC
T ss_pred             EEEECCCCeEEEEEcccCcEee--EeecCCCcEEEEEEcCCCC-EEEEEcCCccEEecC
Confidence            8899999999999998765432  3456778899998877654 589999999999996

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=100.00  E-value=1.8e-37  Score=318.23  Aligned_cols=277  Identities=21%  Similarity=0.329  Sum_probs=233.6

Q ss_pred             CcEEEEEeccCcc-cEEEEEEcCCCc-EEEEECCCcEEEEcCCC-------------------CCCCCCCCEEEEEECCC
Q psy7057           1 MYKLSTALYGHSM-DVRSLSVTPDGC-ILSASRDKSAKLWKPND-------------------LSPGAKVNTLLSASWDM   59 (557)
Q Consensus         1 ~~kl~~~l~gH~~-~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~-------------------~~~~~~~~~l~sgs~Dg   59 (557)
                      ++++.++|.+|.+ .|++++|+|+|+ |++|+.|++|+|||+..                   ++++|++++|++|+.|+
T Consensus         4 ~~~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~   83 (345)
T 3fm0_A            4 SLVLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDA   83 (345)
T ss_dssp             CEEEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTS
T ss_pred             cEEEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCC
Confidence            3678899999998 999999999998 99999999999998754                   56788999999999999


Q ss_pred             eEEEEECCCC--eEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCC-C---cEEEEEeCCCCCEEEEEEeCCCe
Q psy7057          60 TAKLWCLESQ--QCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEE-G---EFLKTLTGHTDCVRGLAVLNDTD  132 (557)
Q Consensus        60 ~i~iwd~~~~--~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~-~---~~~~~l~~h~~~V~~l~~~~~~~  132 (557)
                      ++++|++.++  +++.++.+|...|.+++|+|++ .|++|+.|++|++||.. +   .++..+.+|...|.+++|+|++.
T Consensus        84 ~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~  163 (345)
T 3fm0_A           84 TTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQE  163 (345)
T ss_dssp             CEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSS
T ss_pred             cEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCC
Confidence            9999998876  4678899999999999999988 99999999999999943 2   35677889999999999999976


Q ss_pred             -EEEEECCCeEEEEECCCCe--EEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC-----------------
Q psy7057         133 -FVSCSNDASIRVWDSTTGK--CVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ-----------------  190 (557)
Q Consensus       133 -lvs~s~Dg~I~vwd~~~~~--~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~-----------------  190 (557)
                       |++++.|++|++||+++++  +..++.+|...|++++|  ++++|++++.|++|++|+....                 
T Consensus       164 ~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~  243 (345)
T 3fm0_A          164 LLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKC  243 (345)
T ss_dssp             CEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEE
T ss_pred             EEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccce
Confidence             7799999999999988775  55788999999999999  6789999999999999994211                 


Q ss_pred             -ceEee-CCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcch-------hHHHhcccceeEEEeccCCCceeEEEEe
Q psy7057         191 -NSFMI-PAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAE-------DAVQAQYAEEVKKLKSANEQEIGGVKVS  260 (557)
Q Consensus       191 -~~~~~-~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~-------~~~~~~~~~~v~~l~~~~~~~~~~vs~s  260 (557)
                       ..+.. |...|++++|+|++. +++++.|+.|++|+........       ......|...|..+.+.+..+..++++|
T Consensus       244 ~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s  323 (345)
T 3fm0_A          244 ICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCS  323 (345)
T ss_dssp             EEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEE
T ss_pred             eEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcC
Confidence             11222 677899999999988 9999999999999987643211       1123467788999999988776789999


Q ss_pred             CCCcEEEEecCCChhhH
Q psy7057         261 DDGIVRVFSANPDRQAE  277 (557)
Q Consensus       261 ~DG~IrvW~~~~~~~~~  277 (557)
                      .||+|++|++...+...
T Consensus       324 ~Dg~v~~W~~~~~~~~~  340 (345)
T 3fm0_A          324 DDGEVAFWKYQRPEGLH  340 (345)
T ss_dssp             TTSCEEEEEECC-----
T ss_pred             CCCcEEEEEecCCCCcc
Confidence            99999999998876543

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=100.00  E-value=1.9e-37  Score=315.07  Aligned_cols=264  Identities=22%  Similarity=0.304  Sum_probs=233.5

Q ss_pred             EEEEeccCcccEEEEEEcCC----Cc-EEEEECCCcEEEEcCCC------------------CCCCCCCCEEEEEECCCe
Q psy7057           4 LSTALYGHSMDVRSLSVTPD----GC-ILSASRDKSAKLWKPND------------------LSPGAKVNTLLSASWDMT   60 (557)
Q Consensus         4 l~~~l~gH~~~V~~l~~spd----g~-l~sgs~Dg~V~iWd~~~------------------~~~~~~~~~l~sgs~Dg~   60 (557)
                      +.+.+++|.+.|++++|+|+    +. |+||+.|++|++|++..                  +.+++++..+++++.|++
T Consensus        24 ~~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~  103 (321)
T 3ow8_A           24 LFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAH  103 (321)
T ss_dssp             EEEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSE
T ss_pred             eeeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCc
Confidence            34678899999999999985    34 89999999999999754                  456677889999999999


Q ss_pred             EEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEE
Q psy7057          61 AKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCS  137 (557)
Q Consensus        61 i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s  137 (557)
                      |++||+.+++++..+..|...+.+++|+|++ .|++|+.|+.|++|+ ..+.....+..|...|.+++|+|++. |++++
T Consensus       104 i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~  183 (321)
T 3ow8_A          104 IRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGA  183 (321)
T ss_dssp             EEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEE
T ss_pred             EEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEc
Confidence            9999999999999999999999999999998 999999999999999 56778888899999999999999977 77999


Q ss_pred             CCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC---ceEeeCCccEEEEEEcCCCc-E
Q psy7057         138 NDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVAILPNSD-I  211 (557)
Q Consensus       138 ~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p~g~-l  211 (557)
                      .|++|++||+++++++.++.+|...|.+++|  ++.+|++++.|++|++||++..   ..+..|...|.+++|+|++. |
T Consensus       184 ~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l  263 (321)
T 3ow8_A          184 IDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHF  263 (321)
T ss_dssp             TTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEE
T ss_pred             CCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEE
Confidence            9999999999999999999999999999999  6779999999999999998765   56677899999999999998 8


Q ss_pred             EEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEec
Q psy7057         212 VTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSA  270 (557)
Q Consensus       212 ~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~  270 (557)
                      ++++.|++|++||+.+.+...  ....+...+..+.+.+... .+++++.||+|+||+.
T Consensus       264 ~s~s~D~~v~iwd~~~~~~~~--~~~~h~~~v~~v~~s~~g~-~l~s~~~d~~i~vwd~  319 (321)
T 3ow8_A          264 VSSSSDKSVKVWDVGTRTCVH--TFFDHQDQVWGVKYNGNGS-KIVSVGDDQEIHIYDC  319 (321)
T ss_dssp             EEEETTSCEEEEETTTTEEEE--EECCCSSCEEEEEECTTSS-EEEEEETTCCEEEEEC
T ss_pred             EEEeCCCcEEEEeCCCCEEEE--EEcCCCCcEEEEEECCCCC-EEEEEeCCCeEEEEeC
Confidence            999999999999998776543  2345677888998877654 5899999999999996

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=100.00  E-value=2.5e-37  Score=311.21  Aligned_cols=268  Identities=16%  Similarity=0.209  Sum_probs=228.4

Q ss_pred             cEEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEE
Q psy7057           2 YKLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLW   64 (557)
Q Consensus         2 ~kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iw   64 (557)
                      +++.++|.+|.+.|++++|+|++. |++|+.||+|++||+.+                +.+.+++++|++|+.|++|++|
T Consensus         3 l~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vw   82 (304)
T 2ynn_A            3 LDIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVF   82 (304)
T ss_dssp             CCCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEE
T ss_pred             ceeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEE
Confidence            567899999999999999999998 89999999999999976                4566788999999999999999


Q ss_pred             ECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCC-C-cEEEEEeCCCCCEEEEEEeCC-C-eEEEEECC
Q psy7057          65 CLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEE-G-EFLKTLTGHTDCVRGLAVLND-T-DFVSCSND  139 (557)
Q Consensus        65 d~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~-~-~~~~~l~~h~~~V~~l~~~~~-~-~lvs~s~D  139 (557)
                      |+.+++++..+.+|...|.+++|+|++ .|++|+.|++|++||.. + .....+.+|...|.+++|+|. + .|++|+.|
T Consensus        83 d~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D  162 (304)
T 2ynn_A           83 NYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLD  162 (304)
T ss_dssp             ETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETT
T ss_pred             ECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCC
Confidence            999999999999999999999999998 99999999999999943 3 456778999999999999984 4 48899999


Q ss_pred             CeEEEEECCCCeEEEEEe-CCCCcEEEEEE----cCCEEEEEeCCCeEEEEECCCC---ceEeeCCccEEEEEEcCCCc-
Q psy7057         140 ASIRVWDSTTGKCVHTMY-GHPNFIYSVAA----HGDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVAILPNSD-  210 (557)
Q Consensus       140 g~I~vwd~~~~~~~~~~~-~h~~~V~~l~~----~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p~g~-  210 (557)
                      ++|++||++++.+...+. +|...+..+.+    ++.+|++++.|++|++||+++.   ..+..|...|.+++|+|++. 
T Consensus       163 ~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~  242 (304)
T 2ynn_A          163 RTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPI  242 (304)
T ss_dssp             SEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSE
T ss_pred             CeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCE
Confidence            999999998877666654 56678888888    4569999999999999998766   66778999999999999998 


Q ss_pred             EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCcee-EEEEeCCCcEEEEecCC
Q psy7057         211 IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIG-GVKVSDDGIVRVFSANP  272 (557)
Q Consensus       211 l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~-~vs~s~DG~IrvW~~~~  272 (557)
                      |++|+.||+|++||..+.+....  ...+...+..+.+.+..... +++|+ |..+.+|++..
T Consensus       243 l~s~s~Dg~i~iWd~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~asg~-~~g~~~~~~~~  302 (304)
T 2ynn_A          243 IISGSEDGTLKIWNSSTYKVEKT--LNVGLERSWCIATHPTGRKNYIASGF-DNGFTVLSLGN  302 (304)
T ss_dssp             EEEEETTSCEEEEETTTCCEEEE--ECCSSSSEEEEEECTTCGGGCEEEEE-TTEEEEEECC-
T ss_pred             EEEEcCCCeEEEEECCCCceeee--ccCCCccEEEEEECCCCCceEEEEec-CCceEEEEecc
Confidence            89999999999999988765432  23455677888877766544 45555 55577777664

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=100.00  E-value=5.3e-37  Score=311.19  Aligned_cols=270  Identities=27%  Similarity=0.387  Sum_probs=232.4

Q ss_pred             cEEEEEeccCcccEEEEEEcCCC-c-EEEEECCCcEEEEcCCC---------------------CCCCCCCCEEEEEECC
Q psy7057           2 YKLSTALYGHSMDVRSLSVTPDG-C-ILSASRDKSAKLWKPND---------------------LSPGAKVNTLLSASWD   58 (557)
Q Consensus         2 ~kl~~~l~gH~~~V~~l~~spdg-~-l~sgs~Dg~V~iWd~~~---------------------~~~~~~~~~l~sgs~D   58 (557)
                      +.+..+|.||.+.|++++|+|++ . |+||+.|++|++|++..                     +.+++++.+|++|+.|
T Consensus         7 ~~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D   86 (319)
T 3frx_A            7 LVLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWD   86 (319)
T ss_dssp             EEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred             EEEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCC
Confidence            57888999999999999999975 4 88999999999998642                     5678889999999999


Q ss_pred             CeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcEEEEEeCCCCCEEEEEEeCCC------
Q psy7057          59 MTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDT------  131 (557)
Q Consensus        59 g~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~~------  131 (557)
                      ++|++||+.+++++..+.+|...|.+++|+|++ .|++|+.|++|++||..+.++..+.+|...|.++.++|..      
T Consensus        87 ~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~  166 (319)
T 3frx_A           87 KTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDS  166 (319)
T ss_dssp             SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECCC------C
T ss_pred             CEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeccCCcEEEEEEccCCCCCCCc
Confidence            999999999999999999999999999999988 9999999999999999999999999999999999999853      


Q ss_pred             -eEEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC---ceEeeCCccEEEEEE
Q psy7057         132 -DFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVAI  205 (557)
Q Consensus       132 -~lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~  205 (557)
                       .+++++.|++|++||++++++...+.+|...|.++++  ++.+|++++.|++|++||+...   ..+. +...|.+++|
T Consensus       167 ~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~  245 (319)
T 3frx_A          167 VTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLS-AQDEVFSLAF  245 (319)
T ss_dssp             CEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEE-CCSCEEEEEE
T ss_pred             cEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEec-CCCcEEEEEE
Confidence             4789999999999999999999999999999999999  6789999999999999998776   2333 4568999999


Q ss_pred             cCCCcEEEEEcCCcEEEEecCCCCcchhH------HHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCC
Q psy7057         206 LPNSDIVTGSSDGIVRVFSANPDRQAEDA------VQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPD  273 (557)
Q Consensus       206 ~p~g~l~sg~~Dg~I~iwd~~~~~~~~~~------~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~  273 (557)
                      +|++.+++++.++.+++|+++........      ....+...+..+.+.++.. .+++|+.||.|+||++.+.
T Consensus       246 sp~~~~la~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~-~l~sg~~Dg~i~vWd~~t~  318 (319)
T 3frx_A          246 SPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQ-TLFAGYTDNVIRVWQVMTA  318 (319)
T ss_dssp             CSSSSEEEEEETTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSS-EEEEEETTSCEEEEEEEEC
T ss_pred             cCCCCEEEEEcCCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCC-EEEEeecCceEEEEEEeec
Confidence            99999665566677999998765432111      1123445677788877655 5899999999999998653

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=100.00  E-value=2.4e-36  Score=309.31  Aligned_cols=270  Identities=23%  Similarity=0.299  Sum_probs=229.1

Q ss_pred             cEEEEEeccCcccEEEEEE-----cC-CCc-EEEEECCCcEEEEcCCC-----------------------CCCCCCCCE
Q psy7057           2 YKLSTALYGHSMDVRSLSV-----TP-DGC-ILSASRDKSAKLWKPND-----------------------LSPGAKVNT   51 (557)
Q Consensus         2 ~kl~~~l~gH~~~V~~l~~-----sp-dg~-l~sgs~Dg~V~iWd~~~-----------------------~~~~~~~~~   51 (557)
                      +++..+|.||.+.|++++|     ++ ++. |+||+.|++|++||+..                       +.+++++.+
T Consensus        11 ~~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~   90 (343)
T 2xzm_R           11 VVKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCF   90 (343)
T ss_dssp             EEEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTE
T ss_pred             eeeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCE
Confidence            4677899999999999999     76 777 89999999999999752                       566788999


Q ss_pred             EEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcEEEEEe---CCCCCEEEEEE
Q psy7057          52 LLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFLKTLT---GHTDCVRGLAV  127 (557)
Q Consensus        52 l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~~~l~---~h~~~V~~l~~  127 (557)
                      +++|+.|++|++||+.+++++..+.+|...|.+++|+|++ .|++++.|++|++||..+.....+.   +|...|.+++|
T Consensus        91 l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~  170 (343)
T 2xzm_R           91 AISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRY  170 (343)
T ss_dssp             EEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEE
T ss_pred             EEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeee
Confidence            9999999999999999999999999999999999999998 9999999999999997776665554   78999999999


Q ss_pred             eCCC-----------eEEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC---c
Q psy7057         128 LNDT-----------DFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ---N  191 (557)
Q Consensus       128 ~~~~-----------~lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~---~  191 (557)
                      +|++           .|++++.|++|++|| ...+....+.+|...|.+++|  ++++|++|+.|+.|++||+...   .
T Consensus       171 ~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~  249 (343)
T 2xzm_R          171 SPIMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQ  249 (343)
T ss_dssp             CCCCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCS
T ss_pred             ccccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccc
Confidence            9875           488999999999999 567788889999999999999  6789999999999999997432   2


Q ss_pred             eEeeCCccEEEEEEcCCCcEEEEEcCCcEEEEecCCCCcchhHH-----------HhcccceeEEEeccCCCceeEEEEe
Q psy7057         192 SFMIPAMSVWAVAILPNSDIVTGSSDGIVRVFSANPDRQAEDAV-----------QAQYAEEVKKLKSANEQEIGGVKVS  260 (557)
Q Consensus       192 ~~~~~~~~v~~v~~~p~g~l~sg~~Dg~I~iwd~~~~~~~~~~~-----------~~~~~~~v~~l~~~~~~~~~~vs~s  260 (557)
                      ....+...|.+++|+|++.+++++.|+.|++|++.+........           ...+...+..+.+.+... .+++|+
T Consensus       250 ~~~~~~~~v~~v~~sp~~~~la~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~-~l~sg~  328 (343)
T 2xzm_R          250 REFDAGSTINQIAFNPKLQWVAVGTDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGK-KLFAGF  328 (343)
T ss_dssp             EEEECSSCEEEEEECSSSCEEEEEESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSC-CEEEEE
T ss_pred             eeecCCCcEEEEEECCCCCEEEEECCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCC-eEEEec
Confidence            33345667999999999998888889999999997655432111           114556688888877655 589999


Q ss_pred             CCCcEEEEecCCC
Q psy7057         261 DDGIVRVFSANPD  273 (557)
Q Consensus       261 ~DG~IrvW~~~~~  273 (557)
                      .||+||+|++.++
T Consensus       329 ~Dg~v~~w~~~~g  341 (343)
T 2xzm_R          329 TDGVIRTFSFETS  341 (343)
T ss_dssp             TTSEEEEEEEEEE
T ss_pred             CCceEEEEEEEcc
Confidence            9999999997643

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=100.00  E-value=2.9e-37  Score=316.92  Aligned_cols=261  Identities=20%  Similarity=0.223  Sum_probs=220.4

Q ss_pred             ccCcccEEEEEEcCCCcEEEEECCCcEEEEcCCC---------------------------CCCCCCCCEEEEEECCCeE
Q psy7057           9 YGHSMDVRSLSVTPDGCILSASRDKSAKLWKPND---------------------------LSPGAKVNTLLSASWDMTA   61 (557)
Q Consensus         9 ~gH~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~---------------------------~~~~~~~~~l~sgs~Dg~i   61 (557)
                      ..|...|.+++|+|||++++++.|+++|+||...                           ++++++ +.|++|+.||+|
T Consensus        27 ~~~~~~v~~~~fs~dG~~l~~~sd~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d-~~l~~~s~dg~v  105 (344)
T 4gqb_B           27 ACMERQLEAARYRSDGALLLGASSLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGE-RGILVASDSGAV  105 (344)
T ss_dssp             SSCCSEEEEEEECTTSCEEEEEECCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETT-TEEEEEETTSEE
T ss_pred             ccccCCEEEEEECCCCCEEEEEeCCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCC-CeEEEEECCCEE
Confidence            4578889999999999955444588888886321                           445555 578999999999


Q ss_pred             EEEECCCCeEE----EEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe--E
Q psy7057          62 KLWCLESQQCK----LTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD--F  133 (557)
Q Consensus        62 ~iwd~~~~~~~----~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~--l  133 (557)
                      +|||+.+++.+    ..+.+|...|++++|+|++ +|++|+.|++|++|| .+++++..+.+|...|++++|++++.  |
T Consensus       106 ~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l  185 (344)
T 4gqb_B          106 ELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVF  185 (344)
T ss_dssp             EEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEE
T ss_pred             EEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCce
Confidence            99999988643    3356899999999999998 999999999999999 57788999999999999999999863  7


Q ss_pred             EEEECCCeEEEEECCCCeEEEEEe--CCCCcEEEEEE---cCCEEEEEeCCCeEEEEECCCC---ceEeeCCccEEEEEE
Q psy7057         134 VSCSNDASIRVWDSTTGKCVHTMY--GHPNFIYSVAA---HGDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVAI  205 (557)
Q Consensus       134 vs~s~Dg~I~vwd~~~~~~~~~~~--~h~~~V~~l~~---~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~  205 (557)
                      ++++.|++|++||++++++...+.  .|...+.++++   ++.+|++|+.|++|++||+++.   ..+..|...|++++|
T Consensus       186 ~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~f  265 (344)
T 4gqb_B          186 LSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVF  265 (344)
T ss_dssp             EEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEE
T ss_pred             eeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEE
Confidence            799999999999999999888774  45667899998   3468999999999999997755   678889999999999


Q ss_pred             cCCCc--EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCC
Q psy7057         206 LPNSD--IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPD  273 (557)
Q Consensus       206 ~p~g~--l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~  273 (557)
                      +|++.  |++|+.|++|+|||+.+++...   ...|...|..+.+.+.....++++|.||+|++|++..+
T Consensus       266 sp~g~~~lasgs~D~~i~vwd~~~~~~~~---~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~  332 (344)
T 4gqb_B          266 SPHSVPFLASLSEDCSLAVLDSSLSELFR---SQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTE  332 (344)
T ss_dssp             CSSSSCCEEEEETTSCEEEECTTCCEEEE---ECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC-
T ss_pred             ccCCCeEEEEEeCCCeEEEEECCCCcEEE---EcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCC
Confidence            99985  8899999999999998876542   45688899999999888777889999999999999764

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.6e-36  Score=309.12  Aligned_cols=271  Identities=21%  Similarity=0.254  Sum_probs=218.6

Q ss_pred             CcEEEEEeccCcccEEEEEEcCCCcEEEEECCCcEEEEcCCC--------------------CCCCCCCCEEEEEECCCe
Q psy7057           1 MYKLSTALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPND--------------------LSPGAKVNTLLSASWDMT   60 (557)
Q Consensus         1 ~~kl~~~l~gH~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~--------------------~~~~~~~~~l~sgs~Dg~   60 (557)
                      .+++.++|.+|.+.|++++|+|+ .|++|+.|++|++|++..                    ++++|++.+|++|+.|++
T Consensus         3 ~~~~~~~~~~h~~~v~~~~~s~~-~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~   81 (330)
T 2hes_X            3 SINLIKSLKLYKEKIWSFDFSQG-ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDST   81 (330)
T ss_dssp             CCEEEEEEECCSSCEEEEEEETT-EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSC
T ss_pred             ccccceeeccCCCceeeeccCCC-EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCc
Confidence            36788999999999999999998 899999999999998753                    456778899999999999


Q ss_pred             EEEEECCC-------CeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCC-----CcEEEEEeCCCCCEEEEEE
Q psy7057          61 AKLWCLES-------QQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEE-----GEFLKTLTGHTDCVRGLAV  127 (557)
Q Consensus        61 i~iwd~~~-------~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~-----~~~~~~l~~h~~~V~~l~~  127 (557)
                      |++|++..       .+++..+.+|...|.+++|+|++ +|++|+.|++|++||..     .+++..+.+|...|.+++|
T Consensus        82 v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~  161 (330)
T 2hes_X           82 VSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIW  161 (330)
T ss_dssp             EEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEE
T ss_pred             EEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEE
Confidence            99999843       45778899999999999999998 99999999999999952     2467788999999999999


Q ss_pred             eCCCe-EEEEECCCeEEEEECCCC--eEEEEEeCCCCcEEEEEEc----CCEEEEEeCCCeEEEEECCCC----------
Q psy7057         128 LNDTD-FVSCSNDASIRVWDSTTG--KCVHTMYGHPNFIYSVAAH----GDLITSGGEDQCVCVYQNKAQ----------  190 (557)
Q Consensus       128 ~~~~~-lvs~s~Dg~I~vwd~~~~--~~~~~~~~h~~~V~~l~~~----~~~l~s~s~Dg~I~iwd~~~~----------  190 (557)
                      +|++. |++++.|++|++||+.++  +++..+.+|...|++++|+    +..|++++.|++|++|++...          
T Consensus       162 ~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~  241 (330)
T 2hes_X          162 HPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVC  241 (330)
T ss_dssp             CSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEE
T ss_pred             CCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEE
Confidence            99976 779999999999998776  6888999999999999993    458999999999999996432          


Q ss_pred             -ceEee-CCccEEEEEEcCCCcEEEEEcCCcEEEEecCCCCcch-hHHHhcccc-eeEEEeccCC-CceeEEEEeCCCcE
Q psy7057         191 -NSFMI-PAMSVWAVAILPNSDIVTGSSDGIVRVFSANPDRQAE-DAVQAQYAE-EVKKLKSANE-QEIGGVKVSDDGIV  265 (557)
Q Consensus       191 -~~~~~-~~~~v~~v~~~p~g~l~sg~~Dg~I~iwd~~~~~~~~-~~~~~~~~~-~v~~l~~~~~-~~~~~vs~s~DG~I  265 (557)
                       ..+.. |...|++++|++++.|++++.||+|+||+...+.... ......|.. .+..+.+.+. +...++++|.||+|
T Consensus       242 ~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v  321 (330)
T 2hes_X          242 EAILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIV  321 (330)
T ss_dssp             EEECCSCCSSCEEEEEECTTSCEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEE
T ss_pred             eeecccccccceEEEEEcCCCEEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcE
Confidence             12222 7789999999988879999999999999987653111 111123444 6788887764 45568999999999


Q ss_pred             EEEecCC
Q psy7057         266 RVFSANP  272 (557)
Q Consensus       266 rvW~~~~  272 (557)
                      +||++..
T Consensus       322 ~~W~~~~  328 (330)
T 2hes_X          322 NFWSLEK  328 (330)
T ss_dssp             EEEEC--
T ss_pred             EEEEecc
Confidence            9999764

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=100.00  E-value=6.2e-36  Score=308.00  Aligned_cols=264  Identities=22%  Similarity=0.283  Sum_probs=230.8

Q ss_pred             EEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEE
Q psy7057           3 KLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWC   65 (557)
Q Consensus         3 kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd   65 (557)
                      +..++|.||.+.|++++|+|+++ |+||+.||+|++||..+                +.++|++..|++|+.|+++++|+
T Consensus        55 ~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~  134 (354)
T 2pbi_B           55 KTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYP  134 (354)
T ss_dssp             CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEE
T ss_pred             EEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEE
Confidence            56789999999999999999998 99999999999999765                56788999999999999999999


Q ss_pred             CCCC------eEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCC--C-eEE
Q psy7057          66 LESQ------QCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLND--T-DFV  134 (557)
Q Consensus        66 ~~~~------~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~--~-~lv  134 (557)
                      +...      .....+.+|...|.+++|+|++ .|++++.|++|++|| .+++++..+.+|...|.+++++|+  + .|+
T Consensus       135 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~  214 (354)
T 2pbi_B          135 LTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFV  214 (354)
T ss_dssp             CCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEE
T ss_pred             EeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEE
Confidence            8643      2456677899999999999988 999999999999999 577889999999999999999874  3 488


Q ss_pred             EEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCCceEe---e--CCccEEEEEEcC
Q psy7057         135 SCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQNSFM---I--PAMSVWAVAILP  207 (557)
Q Consensus       135 s~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~~~~~---~--~~~~v~~v~~~p  207 (557)
                      +|+.|++|++||+++++++..+.+|...|.+++|  ++..|++++.|++|++||++....+.   .  +...+.+++|+|
T Consensus       215 sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~  294 (354)
T 2pbi_B          215 SGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSL  294 (354)
T ss_dssp             EEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECT
T ss_pred             EEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeC
Confidence            9999999999999999999999999999999999  67899999999999999988763322   1  224689999999


Q ss_pred             CCc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEe
Q psy7057         208 NSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFS  269 (557)
Q Consensus       208 ~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~  269 (557)
                      ++. +++|+.|++|++||+.++....  ....|...+..+.+.++.. .++++|.||+|+||+
T Consensus       295 ~g~~l~~g~~d~~i~vwd~~~~~~~~--~l~~h~~~v~~l~~spdg~-~l~sgs~D~~v~vW~  354 (354)
T 2pbi_B          295 SGRLLFAGYNDYTINVWDVLKGSRVS--ILFGHENRVSTLRVSPDGT-AFCSGSWDHTLRVWA  354 (354)
T ss_dssp             TSSEEEEEETTSCEEEEETTTCSEEE--EECCCSSCEEEEEECTTSS-CEEEEETTSEEEEEC
T ss_pred             CCCEEEEEECCCcEEEEECCCCceEE--EEECCCCcEEEEEECCCCC-EEEEEcCCCCEEecC
Confidence            999 8899999999999998776442  3346788899999887655 689999999999995

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=100.00  E-value=1.1e-36  Score=316.63  Aligned_cols=272  Identities=22%  Similarity=0.293  Sum_probs=230.2

Q ss_pred             cEEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEE
Q psy7057           2 YKLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLW   64 (557)
Q Consensus         2 ~kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iw   64 (557)
                      +.+.++|.||.+.|++++|+|++. |+||+.|++|+|||+.+                +++++++.+|++|+.|+++++|
T Consensus        56 ~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw  135 (380)
T 3iz6_a           56 LVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIF  135 (380)
T ss_dssp             CEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEE
T ss_pred             eEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEE
Confidence            456789999999999999999998 99999999999999865                6788899999999999999999


Q ss_pred             ECCCCe-------EEEEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEe-CCCcEEEEE-----eCCCCCEEEEEEeC
Q psy7057          65 CLESQQ-------CKLTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHS-EEGEFLKTL-----TGHTDCVRGLAVLN  129 (557)
Q Consensus        65 d~~~~~-------~~~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd-~~~~~~~~l-----~~h~~~V~~l~~~~  129 (557)
                      ++.+..       ....+.+|...|.++.|.|++  .|++|+.|++|++|| .++..+..+     .+|...|.++++++
T Consensus       136 ~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~  215 (380)
T 3iz6_a          136 NLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINS  215 (380)
T ss_dssp             ECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECS
T ss_pred             ECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeec
Confidence            986532       345678999999999999964  799999999999999 566777766     67999999999986


Q ss_pred             -CC-eEEEEECCCeEEEEECC-CCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCCceEe---eC-----
Q psy7057         130 -DT-DFVSCSNDASIRVWDST-TGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQNSFM---IP-----  196 (557)
Q Consensus       130 -~~-~lvs~s~Dg~I~vwd~~-~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~~~~~---~~-----  196 (557)
                       ++ .|++|+.|++|++||++ .++++..+.+|...|.+++|  ++.+|++|+.|++|++||+++...+.   .+     
T Consensus       216 ~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~  295 (380)
T 3iz6_a          216 LNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRND  295 (380)
T ss_dssp             SSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSC
T ss_pred             CCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccc
Confidence             44 47899999999999998 45788899999999999999  67899999999999999988763332   21     


Q ss_pred             --CccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhH--HHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecC
Q psy7057         197 --AMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDA--VQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSAN  271 (557)
Q Consensus       197 --~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~--~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~  271 (557)
                        ...|.+++|+|+++ +++|+.||.|++||....+.....  ....|...+..+.+.++.. .+++||.||+|+||++.
T Consensus       296 ~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~-~l~sgs~D~~i~iW~~~  374 (380)
T 3iz6_a          296 NELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGS-ALCTGSWDKNLKIWAFS  374 (380)
T ss_dssp             CSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSS-EEEEECTTSCEEEEECC
T ss_pred             cccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCC-EEEEeeCCCCEEEEecC
Confidence              12489999999999 889999999999998776543221  1245778889998887655 58999999999999998


Q ss_pred             CCh
Q psy7057         272 PDR  274 (557)
Q Consensus       272 ~~~  274 (557)
                      ..+
T Consensus       375 ~~~  377 (380)
T 3iz6_a          375 GHR  377 (380)
T ss_dssp             SSS
T ss_pred             CCc
Confidence            764

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=100.00  E-value=4.1e-36  Score=309.79  Aligned_cols=263  Identities=20%  Similarity=0.215  Sum_probs=216.3

Q ss_pred             eccCcccEEEEEEcCCCc-EEEEEC------CCcEEEEcCCC--------------------CCCCCCCCEEEEEECCCe
Q psy7057           8 LYGHSMDVRSLSVTPDGC-ILSASR------DKSAKLWKPND--------------------LSPGAKVNTLLSASWDMT   60 (557)
Q Consensus         8 l~gH~~~V~~l~~spdg~-l~sgs~------Dg~V~iWd~~~--------------------~~~~~~~~~l~sgs~Dg~   60 (557)
                      ..+|.+.|++++|+|||+ |++||.      |++|++|+..+                    +++++++ .+++++.|++
T Consensus        38 p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~-~~l~~s~dg~  116 (357)
T 4g56_B           38 PACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEK-GILVASDSGA  116 (357)
T ss_dssp             --CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTT-EEEEEETTSC
T ss_pred             cccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCC-CEEEEECCCE
Confidence            457999999999999999 889987      78899998754                    4556654 5778899999


Q ss_pred             EEEEECCCCeEE----EEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCC--e
Q psy7057          61 AKLWCLESQQCK----LTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDT--D  132 (557)
Q Consensus        61 i~iwd~~~~~~~----~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~--~  132 (557)
                      |+|||+.+++..    ....+|...|.+++|+|++ .|++|+.|++|++|| .+++++..+.+|...|++++|++++  .
T Consensus       117 v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~  196 (357)
T 4g56_B          117 VELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTI  196 (357)
T ss_dssp             EEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSC
T ss_pred             EEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCce
Confidence            999999887654    3455899999999999998 999999999999999 5678889999999999999999885  4


Q ss_pred             EEEEECCCeEEEEECCCCeEEEEEe--CCCCcEEEEEEc---CCEEEEEeCCCeEEEEECCCC---ceEeeCCccEEEEE
Q psy7057         133 FVSCSNDASIRVWDSTTGKCVHTMY--GHPNFIYSVAAH---GDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVA  204 (557)
Q Consensus       133 lvs~s~Dg~I~vwd~~~~~~~~~~~--~h~~~V~~l~~~---~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~  204 (557)
                      +++++.|++|++||+++++++..+.  .|...+.+++|.   +.+|++|+.|+.|++||+++.   ..+..|...|++++
T Consensus       197 ~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~  276 (357)
T 4g56_B          197 FLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLA  276 (357)
T ss_dssp             EEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEE
T ss_pred             eeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEE
Confidence            8899999999999999988776554  467789999993   458999999999999998765   67778889999999


Q ss_pred             EcCCCc--EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCCh
Q psy7057         205 ILPNSD--IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDR  274 (557)
Q Consensus       205 ~~p~g~--l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~~  274 (557)
                      |+|++.  |++|+.|++|+|||+++++....   ..|...|..+.+.|.+...++++|.||+|++|++....
T Consensus       277 ~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~---~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~  345 (357)
T 4g56_B          277 YSYHSSPFLASISEDCTVAVLDADFSEVFRD---LSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEG  345 (357)
T ss_dssp             ECSSSSCCEEEEETTSCEEEECTTSCEEEEE---CCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC---
T ss_pred             EcCCCCCEEEEEeCCCEEEEEECCCCcEeEE---CCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCC
Confidence            999975  78999999999999988765532   25778899999988667778999999999999997643

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=100.00  E-value=1.2e-34  Score=293.81  Aligned_cols=272  Identities=24%  Similarity=0.333  Sum_probs=230.4

Q ss_pred             cEEEEEeccCcccEEEEEEcCC-Cc-EEEEECCCcEEEEcCCC---------------------CCCCCCCCEEEEEECC
Q psy7057           2 YKLSTALYGHSMDVRSLSVTPD-GC-ILSASRDKSAKLWKPND---------------------LSPGAKVNTLLSASWD   58 (557)
Q Consensus         2 ~kl~~~l~gH~~~V~~l~~spd-g~-l~sgs~Dg~V~iWd~~~---------------------~~~~~~~~~l~sgs~D   58 (557)
                      .++..+|+||.+.|++|+|+|+ ++ |+|||.|++|+|||+..                     +.+++++.+|++++.|
T Consensus        28 ~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d  107 (340)
T 4aow_A           28 MTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWD  107 (340)
T ss_dssp             EEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred             eEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEccc
Confidence            4677899999999999999998 45 88999999999999754                     5677889999999999


Q ss_pred             CeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcE--EEEEeCCCCCEEEEEEeCCC---e
Q psy7057          59 MTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEF--LKTLTGHTDCVRGLAVLNDT---D  132 (557)
Q Consensus        59 g~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~--~~~l~~h~~~V~~l~~~~~~---~  132 (557)
                      +.|++|+............+...+..+.+.+.+ .|++|+.|+.+++||.....  ...+.+|...+.++++++++   .
T Consensus       108 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~  187 (340)
T 4aow_A          108 GTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPI  187 (340)
T ss_dssp             SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCE
T ss_pred             ccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcE
Confidence            999999999999988888899999999999987 89999999999999965443  34456899999999998773   3


Q ss_pred             EEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCCceE--eeCCccEEEEEEcCC
Q psy7057         133 FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQNSF--MIPAMSVWAVAILPN  208 (557)
Q Consensus       133 lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~~~~--~~~~~~v~~v~~~p~  208 (557)
                      +++++.|++|++||+++++++..+.+|...|.++++  ++++|++|+.|++|++||++....+  ..+...|.+++++|+
T Consensus       188 ~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~  267 (340)
T 4aow_A          188 IVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPN  267 (340)
T ss_dssp             EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECSS
T ss_pred             EEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCCC
Confidence            679999999999999999999999999999999999  6789999999999999998877322  234568999999999


Q ss_pred             CcEEEEEcCCcEEEEecCCCCcc-------hhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCCh
Q psy7057         209 SDIVTGSSDGIVRVFSANPDRQA-------EDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDR  274 (557)
Q Consensus       209 g~l~sg~~Dg~I~iwd~~~~~~~-------~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~~  274 (557)
                      +.+++++.|+.|++|+++.....       .......+...+..+.+.++.. .+++|+.||.||||++.++.
T Consensus       268 ~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~-~l~sgs~Dg~v~iW~~~tGt  339 (340)
T 4aow_A          268 RYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQ-TLFAGYTDNLVRVWQVTIGT  339 (340)
T ss_dssp             SSEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSS-EEEEEETTSCEEEEEEEC--
T ss_pred             CceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCC-EEEEEeCCCEEEEEeCCCcC
Confidence            99999999999999999875432       1223345777888898877655 58999999999999998764

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=100.00  E-value=2.4e-34  Score=289.60  Aligned_cols=268  Identities=25%  Similarity=0.406  Sum_probs=228.6

Q ss_pred             CcEEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEE
Q psy7057           1 MYKLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKL   63 (557)
Q Consensus         1 ~~kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~i   63 (557)
                      .|++..++.+|.+.|++++|+|+++ |++|+.||.|++|++.+                +.+++++++|++|+.|+.|++
T Consensus        12 ~~~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~v   91 (312)
T 4ery_A           12 NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKI   91 (312)
T ss_dssp             CCEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred             CceeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEE
Confidence            3678899999999999999999998 88999999999999865                677889999999999999999


Q ss_pred             EECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCC
Q psy7057          64 WCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDA  140 (557)
Q Consensus        64 wd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg  140 (557)
                      ||+.+++++..+.+|...|.+++|+|++ .|++|+.|+.|++|| .+++++..+..|...|.+++|+|++. |++++.|+
T Consensus        92 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~  171 (312)
T 4ery_A           92 WDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG  171 (312)
T ss_dssp             EETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred             EECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC
Confidence            9999999999999999999999999988 999999999999999 56788899999999999999999976 77999999


Q ss_pred             eEEEEECCCCeEEEEEe-CCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC---ceEeeCCccE---EEEEEcCCCc-
Q psy7057         141 SIRVWDSTTGKCVHTMY-GHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSV---WAVAILPNSD-  210 (557)
Q Consensus       141 ~I~vwd~~~~~~~~~~~-~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v---~~v~~~p~g~-  210 (557)
                      .|++||+++++++..+. .+...+.++++  ++++|++++.|+.|++||+.+.   ..+..|...+   ......+++. 
T Consensus       172 ~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (312)
T 4ery_A          172 LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKW  251 (312)
T ss_dssp             CEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCE
T ss_pred             cEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcE
Confidence            99999999999888775 45678999999  6789999999999999998776   3444454432   2223335566 


Q ss_pred             EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEe--CCCcEEEEecC
Q psy7057         211 IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVS--DDGIVRVFSAN  271 (557)
Q Consensus       211 l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s--~DG~IrvW~~~  271 (557)
                      +++|+.||.|++|++.+.+...  ....|...+..+.+.+.... +++++  .||+|++|+.+
T Consensus       252 l~sg~~dg~i~vwd~~~~~~~~--~~~~h~~~v~~~~~~p~~~~-l~s~~~~~d~~i~~W~~d  311 (312)
T 4ery_A          252 IVSGSEDNLVYIWNLQTKEIVQ--KLQGHTDVVISTACHPTENI-IASAALENDKTIKLWKSD  311 (312)
T ss_dssp             EEECCTTSCEEEEETTTCCEEE--EECCCSSCEEEEEECSSSSE-EEEEECTTTCCEEEEECC
T ss_pred             EEEECCCCEEEEEECCCchhhh--hhhccCCcEEEEeecCcCCc-eEEEEccCCccEEEecCC
Confidence            8899999999999998876542  33457778888888877664 55554  79999999864

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=100.00  E-value=3.5e-34  Score=298.97  Aligned_cols=260  Identities=23%  Similarity=0.343  Sum_probs=221.8

Q ss_pred             cCcccEEEEEEcCCCcEEEEECCCcEEEEcCCC----------------------------------CCCCCCCCEEEEE
Q psy7057          10 GHSMDVRSLSVTPDGCILSASRDKSAKLWKPND----------------------------------LSPGAKVNTLLSA   55 (557)
Q Consensus        10 gH~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~----------------------------------~~~~~~~~~l~sg   55 (557)
                      +|.+.|+|++|+|||++++.+.++++++|++.+                                  +++++++.+|++|
T Consensus        62 ~h~~~V~~v~fspdg~~la~g~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~  141 (393)
T 1erj_A           62 DHTSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATG  141 (393)
T ss_dssp             ECSSCCCEEEECTTSSEEEEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEE
T ss_pred             CCCCEEEEEEECCCCCEEEEEcCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEE
Confidence            699999999999999944344589999998754                                  3467889999999


Q ss_pred             ECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeC-CCcEEEEEeCCCCCEEEEEEeC-CCe
Q psy7057          56 SWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSE-EGEFLKTLTGHTDCVRGLAVLN-DTD  132 (557)
Q Consensus        56 s~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~-~~~~~~~l~~h~~~V~~l~~~~-~~~  132 (557)
                      +.|++|++||+.+++.+..+.+|...|.+++|+|++ .|++++.|++|++||. ++++...+. +...+.+++++| ++.
T Consensus       142 ~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~  220 (393)
T 1erj_A          142 AEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDGVTTVAVSPGDGK  220 (393)
T ss_dssp             ETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSTTCC
T ss_pred             cCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-cCCCcEEEEEECCCCC
Confidence            999999999999999999999999999999999988 9999999999999994 556665555 667899999998 665


Q ss_pred             -EEEEECCCeEEEEECCCCeEEEEE-------eCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC------------
Q psy7057         133 -FVSCSNDASIRVWDSTTGKCVHTM-------YGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ------------  190 (557)
Q Consensus       133 -lvs~s~Dg~I~vwd~~~~~~~~~~-------~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~------------  190 (557)
                       |++|+.|++|++||+++++++..+       .+|...|.+++|  ++.+|++++.|++|++||+...            
T Consensus       221 ~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~  300 (393)
T 1erj_A          221 YIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSG  300 (393)
T ss_dssp             EEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------
T ss_pred             EEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCC
Confidence             779999999999999999888777       579999999999  6789999999999999997542            


Q ss_pred             ---ceEeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCC-----CceeEEEEeC
Q psy7057         191 ---NSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANE-----QEIGGVKVSD  261 (557)
Q Consensus       191 ---~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~-----~~~~~vs~s~  261 (557)
                         ..+..|...|.+++++|++. |++|+.|+.|++||..++....  ....|...+..+.+.+.     ....+++||.
T Consensus       301 ~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~--~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~  378 (393)
T 1erj_A          301 TCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLL--MLQGHRNSVISVAVANGSSLGPEYNVFATGSG  378 (393)
T ss_dssp             CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEE--EEECCSSCEEEEEECSSCTTCTTCEEEEEEET
T ss_pred             cceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEE--EECCCCCCEEEEEecCCcCcCCCCCEEEEECC
Confidence               34567888999999999998 8999999999999998876542  34567778888877653     4567899999


Q ss_pred             CCcEEEEecCC
Q psy7057         262 DGIVRVFSANP  272 (557)
Q Consensus       262 DG~IrvW~~~~  272 (557)
                      ||+||||++..
T Consensus       379 Dg~i~iW~~~~  389 (393)
T 1erj_A          379 DCKARIWKYKK  389 (393)
T ss_dssp             TSEEEEEEEEE
T ss_pred             CCcEEECcccc
Confidence            99999999764

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=100.00  E-value=3.2e-34  Score=321.33  Aligned_cols=269  Identities=26%  Similarity=0.371  Sum_probs=227.1

Q ss_pred             cEEEEEeccCcccEEEEEEcCCC-c-EEEEECCCcEEEEcCCC---------------------CCCCCCCCEEEEEECC
Q psy7057           2 YKLSTALYGHSMDVRSLSVTPDG-C-ILSASRDKSAKLWKPND---------------------LSPGAKVNTLLSASWD   58 (557)
Q Consensus         2 ~kl~~~l~gH~~~V~~l~~spdg-~-l~sgs~Dg~V~iWd~~~---------------------~~~~~~~~~l~sgs~D   58 (557)
                      +++...|++|.+.|++|+|+|++ . |+|||.|++|++|++..                     +++++++.+|++|+.|
T Consensus       372 l~~~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~D  451 (694)
T 3dm0_A          372 LVLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWD  451 (694)
T ss_dssp             SEEEEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred             cchhhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCC
Confidence            46678899999999999999976 3 88999999999999753                     5677889999999999


Q ss_pred             CeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcEEEEE----eCCCCCEEEEEEeCCC--
Q psy7057          59 MTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFLKTL----TGHTDCVRGLAVLNDT--  131 (557)
Q Consensus        59 g~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~~~l----~~h~~~V~~l~~~~~~--  131 (557)
                      ++|++||+.++++...+.+|...|.+++|+|++ .|++|+.|++|++||..+.+...+    .+|...|.+++|+|++  
T Consensus       452 g~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~  531 (694)
T 3dm0_A          452 GELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQ  531 (694)
T ss_dssp             SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSS
T ss_pred             CcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCc
Confidence            999999999999999999999999999999998 999999999999999776665554    3688999999999985  


Q ss_pred             -eEEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCCceEe--eCCccEEEEEEc
Q psy7057         132 -DFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQNSFM--IPAMSVWAVAIL  206 (557)
Q Consensus       132 -~lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~~~~~--~~~~~v~~v~~~  206 (557)
                       .+++++.|++|++||++++++..++.+|...|+++++  ++++|++|+.|++|++||+.+.+.+.  .+...|.+++|+
T Consensus       532 ~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~s  611 (694)
T 3dm0_A          532 PTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCFS  611 (694)
T ss_dssp             CEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCSSCEEEEEEC
T ss_pred             ceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCCCcEEEEEEc
Confidence             4889999999999999999999999999999999999  67899999999999999988774332  244579999999


Q ss_pred             CCCcEEEEEcCCcEEEEecCCCCcchhHH-----------------HhcccceeEEEeccCCCceeEEEEeCCCcEEEEe
Q psy7057         207 PNSDIVTGSSDGIVRVFSANPDRQAEDAV-----------------QAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFS  269 (557)
Q Consensus       207 p~g~l~sg~~Dg~I~iwd~~~~~~~~~~~-----------------~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~  269 (557)
                      |++.+++++.++.|+|||+.+........                 .......+..+.+.++.. .+++||.||+||||+
T Consensus       612 p~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~-~l~sgs~Dg~i~iW~  690 (694)
T 3dm0_A          612 PNRYWLCAATEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGS-TLFSGYTDGVIRVWG  690 (694)
T ss_dssp             SSSSEEEEEETTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSS-EEEEEETTSEEEEEE
T ss_pred             CCCcEEEEEcCCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCC-EEEEEcCCCeEEEEe
Confidence            99997777888889999998765432110                 001111245666666554 689999999999999


Q ss_pred             cC
Q psy7057         270 AN  271 (557)
Q Consensus       270 ~~  271 (557)
                      +.
T Consensus       691 i~  692 (694)
T 3dm0_A          691 IG  692 (694)
T ss_dssp             C-
T ss_pred             cc
Confidence            75

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=100.00  E-value=9.9e-34  Score=312.85  Aligned_cols=267  Identities=20%  Similarity=0.237  Sum_probs=221.6

Q ss_pred             EEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC------------------C---------------------
Q psy7057           4 LSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND------------------L---------------------   43 (557)
Q Consensus         4 l~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~------------------~---------------------   43 (557)
                      ..+.|.+|.+.|++++|+|+|+ |++|+.|++|+|||+.+                  +                     
T Consensus        51 ~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~  130 (611)
T 1nr0_A           51 DTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGH  130 (611)
T ss_dssp             CCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEE
T ss_pred             cCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeE
Confidence            4567889999999999999998 88999999999999742                  1                     


Q ss_pred             -----------------------CCCCCCC-EEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEEC
Q psy7057          44 -----------------------SPGAKVN-TLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCA   98 (557)
Q Consensus        44 -----------------------~~~~~~~-~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~   98 (557)
                                             .++|++. .|++|+.|++|++||..++++..++.+|...|.+++|+|++ +|++|+.
T Consensus       131 v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~  210 (611)
T 1nr0_A          131 VFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGG  210 (611)
T ss_dssp             EEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred             EEEeeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEEC
Confidence                                   1223333 69999999999999999999999999999999999999999 9999999


Q ss_pred             CCeEEEEe-CCCcEEEEEe-------CCCCCEEEEEEeCCCe-EEEEECCCeEEEEECCCCeEEEE--------------
Q psy7057          99 DKTIKLHS-EEGEFLKTLT-------GHTDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHT--------------  155 (557)
Q Consensus        99 dg~I~vwd-~~~~~~~~l~-------~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~~~~--------------  155 (557)
                      |++|++|| .+++++..+.       +|...|.+++|+|++. |++++.|++|++||+++++++.+              
T Consensus       211 D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~  290 (611)
T 1nr0_A          211 DGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGI  290 (611)
T ss_dssp             TSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEE
T ss_pred             CCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEE
Confidence            99999999 6778888774       7999999999999976 77999999999999988766543              


Q ss_pred             -----------------------------EeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCCceEe----------
Q psy7057         156 -----------------------------MYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQNSFM----------  194 (557)
Q Consensus       156 -----------------------------~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~~~~~----------  194 (557)
                                                   +.+|...|.++++  ++++|++++.|++|++||+.+.....          
T Consensus       291 ~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v  370 (611)
T 1nr0_A          291 IWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMI  370 (611)
T ss_dssp             EECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCE
T ss_pred             EEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceE
Confidence                                         3578899999999  77899999999999999965431100          


Q ss_pred             ---------------------------------------------------------------------------eCCcc
Q psy7057         195 ---------------------------------------------------------------------------IPAMS  199 (557)
Q Consensus       195 ---------------------------------------------------------------------------~~~~~  199 (557)
                                                                                                 .+...
T Consensus       371 ~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~  450 (611)
T 1nr0_A          371 TGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYN  450 (611)
T ss_dssp             EEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSC
T ss_pred             EEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCC
Confidence                                                                                       01234


Q ss_pred             EEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCC
Q psy7057         200 VWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANP  272 (557)
Q Consensus       200 v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~  272 (557)
                      +.+++|+|+++ +++|+.|++|++|++.......... ..|...+..+.+.++.. .+++++.|++|++|++..
T Consensus       451 v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~~~v~~v~fspdg~-~las~s~d~~v~~w~~~~  522 (611)
T 1nr0_A          451 SSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKT-IVHPAEITSVAFSNNGA-FLVATDQSRKVIPYSVAN  522 (611)
T ss_dssp             EEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEE-EECSSCEEEEEECTTSS-EEEEEETTSCEEEEEGGG
T ss_pred             ceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeec-cCCCCceEEEEECCCCC-EEEEEcCCCCEEEEEcCC
Confidence            67899999999 8899999999999997654322122 45778899999888765 589999999999999764

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=100.00  E-value=2.1e-33  Score=306.42  Aligned_cols=261  Identities=31%  Similarity=0.479  Sum_probs=234.0

Q ss_pred             EEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC---------------CCCCCCCCEEEEEECCCeEEEEEC
Q psy7057           3 KLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND---------------LSPGAKVNTLLSASWDMTAKLWCL   66 (557)
Q Consensus         3 kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~---------------~~~~~~~~~l~sgs~Dg~i~iwd~   66 (557)
                      ++.+.+.+|...|++++|+|++. |++++.|++|++||...               +++++++..|++++.|+++++|+.
T Consensus       294 ~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~  373 (577)
T 2ymu_A          294 QLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR  373 (577)
T ss_dssp             CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred             cEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC
Confidence            45678899999999999999998 88999999999999865               567888999999999999999995


Q ss_pred             CCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEEE
Q psy7057          67 ESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRV  144 (557)
Q Consensus        67 ~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~v  144 (557)
                       +++.+..+.+|...|.+++|+|++ .|++++.|+.|++||.+++.+..+.+|...|++++|+|++. +++++.|++|++
T Consensus       374 -~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~  452 (577)
T 2ymu_A          374 -NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKL  452 (577)
T ss_dssp             -TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred             -CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEE
Confidence             568888999999999999999998 89999999999999999999999999999999999999976 779999999999


Q ss_pred             EECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC--ceEeeCCccEEEEEEcCCCc-EEEEEcCCc
Q psy7057         145 WDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ--NSFMIPAMSVWAVAILPNSD-IVTGSSDGI  219 (557)
Q Consensus       145 wd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~--~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~  219 (557)
                      ||. +++.+..+.+|...|.+++|  ++++|++++.|++|++|+....  +.+..|...|++++|+|+++ |++++.|+.
T Consensus       453 w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~  531 (577)
T 2ymu_A          453 WNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKT  531 (577)
T ss_dssp             EET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSE
T ss_pred             EEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCE
Confidence            995 67888999999999999999  7789999999999999996443  77888999999999999999 999999999


Q ss_pred             EEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEe
Q psy7057         220 VRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFS  269 (557)
Q Consensus       220 I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~  269 (557)
                      |++||... +..  ....+|...+..+.+.++.. .++|++.||+|++||
T Consensus       532 v~lwd~~~-~~~--~~~~~h~~~v~~~~fs~dg~-~l~s~~~D~~i~~Wd  577 (577)
T 2ymu_A          532 VKLWNRNG-QLL--QTLTGHSSSVWGVAFSPDGQ-TIASASSDKTVKLWN  577 (577)
T ss_dssp             EEEECTTS-CEE--EEEECCSSCEEEEEECTTSS-CEEEEETTSCEEEEC
T ss_pred             EEEEeCCC-CEE--EEEcCCCCCEEEEEEcCCCC-EEEEEeCCCEEEEeC
Confidence            99999753 322  23456788899999887665 588999999999996

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=100.00  E-value=1.8e-33  Score=285.65  Aligned_cols=222  Identities=23%  Similarity=0.385  Sum_probs=206.5

Q ss_pred             EEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEEC
Q psy7057           4 LSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCL   66 (557)
Q Consensus         4 l~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~   66 (557)
                      +...+.+|...|.+++|++++. +++++.|++|++||+.+                +.++|++.+|++|+.|++|++|++
T Consensus        72 ~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~  151 (321)
T 3ow8_A           72 LQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGV  151 (321)
T ss_dssp             EEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEET
T ss_pred             eeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEc
Confidence            4557899999999999999998 88999999999999876                567889999999999999999999


Q ss_pred             CCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEE
Q psy7057          67 ESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIR  143 (557)
Q Consensus        67 ~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~  143 (557)
                      ++++....+..|...|.+++|+|++ .|++|+.|+.|++|| .+++++..+.+|...|++++|+|++. |++++.|++|+
T Consensus       152 ~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~  231 (321)
T 3ow8_A          152 ESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIK  231 (321)
T ss_dssp             TTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEE
T ss_pred             CCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEE
Confidence            9999999999999999999999998 999999999999999 56788899999999999999999976 77999999999


Q ss_pred             EEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC---ceEeeCCccEEEEEEcCCCc-EEEEEcC
Q psy7057         144 VWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVAILPNSD-IVTGSSD  217 (557)
Q Consensus       144 vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p~g~-l~sg~~D  217 (557)
                      +||+++++++.++.+|...|.+++|  ++.+|++++.|++|++||+++.   ..+..|...|++++|+|++. |++++.|
T Consensus       232 iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d  311 (321)
T 3ow8_A          232 IYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDD  311 (321)
T ss_dssp             EEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred             EEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCC
Confidence            9999999999999999999999999  6789999999999999998766   56667889999999999998 9999999


Q ss_pred             CcEEEEec
Q psy7057         218 GIVRVFSA  225 (557)
Q Consensus       218 g~I~iwd~  225 (557)
                      ++|++||.
T Consensus       312 ~~i~vwd~  319 (321)
T 3ow8_A          312 QEIHIYDC  319 (321)
T ss_dssp             CCEEEEEC
T ss_pred             CeEEEEeC
Confidence            99999996

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=100.00  E-value=1.6e-33  Score=311.13  Aligned_cols=267  Identities=22%  Similarity=0.267  Sum_probs=218.1

Q ss_pred             cEEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC-----------------------CCCCCCCCEEEEEEC
Q psy7057           2 YKLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND-----------------------LSPGAKVNTLLSASW   57 (557)
Q Consensus         2 ~kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~-----------------------~~~~~~~~~l~sgs~   57 (557)
                      +++.++|.+|.+.|++++|+|+|+ |++|+.|++|++||+.+                       ++++|++.+|++++.
T Consensus       180 ~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~  259 (611)
T 1nr0_A          180 FKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASA  259 (611)
T ss_dssp             BEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEET
T ss_pred             CeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeC
Confidence            467788999999999999999998 88999999999999642                       456788999999999


Q ss_pred             CCeEEEEECCCCeEEE-------------------------------------------EEcccCCcEEEEEEcCCC-EE
Q psy7057          58 DMTAKLWCLESQQCKL-------------------------------------------TIRQHEMAVWGVIQLANG-II   93 (557)
Q Consensus        58 Dg~i~iwd~~~~~~~~-------------------------------------------~l~~h~~~V~~l~~~~~~-~l   93 (557)
                      |++|++||+.+++++.                                           .+.+|...|++++|+|++ .|
T Consensus       260 D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l  339 (611)
T 1nr0_A          260 DKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTL  339 (611)
T ss_dssp             TSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEE
T ss_pred             CCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEE
Confidence            9999999998876543                                           345799999999999998 99


Q ss_pred             EEEECCCeEEEEeCC-CcEEEEE-e-------------------------------------------------------
Q psy7057          94 VTGCADKTIKLHSEE-GEFLKTL-T-------------------------------------------------------  116 (557)
Q Consensus        94 ~sgs~dg~I~vwd~~-~~~~~~l-~-------------------------------------------------------  116 (557)
                      ++++.|++|++||.. +.+...+ .                                                       
T Consensus       340 ~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~  419 (611)
T 1nr0_A          340 FSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAV  419 (611)
T ss_dssp             EEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEE
T ss_pred             EEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEE
Confidence            999999999999942 2221111 0                                                       


Q ss_pred             --------------------------CCCCCEEEEEEeCCCe-EEEEECCCeEEEEECCCCeE--EEEEeCCCCcEEEEE
Q psy7057         117 --------------------------GHTDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKC--VHTMYGHPNFIYSVA  167 (557)
Q Consensus       117 --------------------------~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~--~~~~~~h~~~V~~l~  167 (557)
                                                .|...+.+++|+|+++ +++|+.|++|++||+.++..  +.. .+|...|.+++
T Consensus       420 s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~~~v~~v~  498 (611)
T 1nr0_A          420 SADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKT-IVHPAEITSVA  498 (611)
T ss_dssp             CTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEE-EECSSCEEEEE
T ss_pred             eCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeec-cCCCCceEEEE
Confidence                                      1334578899999987 66999999999999887653  344 67999999999


Q ss_pred             E--cCCEEEEEeCCCeEEEEECCC-Cc-----eEeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHhc
Q psy7057         168 A--HGDLITSGGEDQCVCVYQNKA-QN-----SFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQ  238 (557)
Q Consensus       168 ~--~~~~l~s~s~Dg~I~iwd~~~-~~-----~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~  238 (557)
                      |  ++++|++++.|++|++|+... ..     .+..|...|++++|+|+++ |++|+.|++|++|++.............
T Consensus       499 fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~~~~~~~~~~  578 (611)
T 1nr0_A          499 FSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGA  578 (611)
T ss_dssp             ECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEEETTS
T ss_pred             ECCCCCEEEEEcCCCCEEEEEcCCCCceeeeeeeeecccceeEEEECCCCCEEEEEECCCcEEEEECCCcccccchhhcc
Confidence            9  788999999999999999765 32     1233888999999999999 9999999999999998754322122345


Q ss_pred             c-cceeEEEeccCCCceeEEEEeCCCcEEEEecC
Q psy7057         239 Y-AEEVKKLKSANEQEIGGVKVSDDGIVRVFSAN  271 (557)
Q Consensus       239 ~-~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~  271 (557)
                      | ...+..+.+.++..  +++++.||+||+|++.
T Consensus       579 h~~~~v~~v~fs~d~~--l~s~~~D~~i~lW~~~  610 (611)
T 1nr0_A          579 HAMSSVNSVIWLNETT--IVSAGQDSNIKFWNVP  610 (611)
T ss_dssp             STTSCEEEEEEEETTE--EEEEETTSCEEEEECC
T ss_pred             CcccCeeEEEEcCCCE--EEEecCCCCEEEEecc
Confidence            6 67888998887664  8999999999999973

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=100.00  E-value=8e-34  Score=291.29  Aligned_cols=220  Identities=19%  Similarity=0.188  Sum_probs=192.1

Q ss_pred             cCcccEEEEEEcCCCcEEEEECCCcEEEEcCCC--------------------CCCCCCCCEEEEEECCCeEEEEECCCC
Q psy7057          10 GHSMDVRSLSVTPDGCILSASRDKSAKLWKPND--------------------LSPGAKVNTLLSASWDMTAKLWCLESQ   69 (557)
Q Consensus        10 gH~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~--------------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~   69 (557)
                      .|...|++++|+|++.|++|+.||+|+|||+.+                    +++++++++|++|+.|++|++||+.++
T Consensus        80 ~~~~~v~~~~~s~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~  159 (344)
T 4gqb_B           80 QTEAGVADLTWVGERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQ  159 (344)
T ss_dssp             EESSCEEEEEEETTTEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred             ccCCCEEEEEEeCCCeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCC
Confidence            356789999999999999999999999999865                    567889999999999999999999999


Q ss_pred             eEEEEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEe-CCCcEEEEEe--CCCCCEEEEEEeCC-Ce-EEEEECCCeE
Q psy7057          70 QCKLTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHS-EEGEFLKTLT--GHTDCVRGLAVLND-TD-FVSCSNDASI  142 (557)
Q Consensus        70 ~~~~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd-~~~~~~~~l~--~h~~~V~~l~~~~~-~~-lvs~s~Dg~I  142 (557)
                      +++.++.+|...|.+++|++++  +|++|+.|++|++|| .++++...+.  .|...+.+++|+|+ +. |++|+.|++|
T Consensus       160 ~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v  239 (344)
T 4gqb_B          160 VVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTV  239 (344)
T ss_dssp             EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEE
T ss_pred             cEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcE
Confidence            9999999999999999999976  789999999999999 4566666664  45667999999986 33 6799999999


Q ss_pred             EEEECCCCeEEEEEeCCCCcEEEEEE--cC-CEEEEEeCCCeEEEEECCCC--ceEeeCCccEEEEEEcCCCc--EEEEE
Q psy7057         143 RVWDSTTGKCVHTMYGHPNFIYSVAA--HG-DLITSGGEDQCVCVYQNKAQ--NSFMIPAMSVWAVAILPNSD--IVTGS  215 (557)
Q Consensus       143 ~vwd~~~~~~~~~~~~h~~~V~~l~~--~~-~~l~s~s~Dg~I~iwd~~~~--~~~~~~~~~v~~v~~~p~g~--l~sg~  215 (557)
                      ++||+++++++.++.+|...|++++|  ++ .+|++|+.|++|++||....  ..+..|...|++++|+|++.  |++++
T Consensus       240 ~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~~~H~~~V~~v~~sp~~~~llas~s  319 (344)
T 4gqb_B          240 SLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQAHRDFVRDATWSPLNHSLLTTVG  319 (344)
T ss_dssp             EEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEECCCSSCEEEEEECSSSTTEEEEEE
T ss_pred             EEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEEcCCCCCEEEEEEeCCCCeEEEEEc
Confidence            99999999999999999999999999  44 47999999999999998766  55677899999999999987  56899


Q ss_pred             cCCcEEEEecCCCC
Q psy7057         216 SDGIVRVFSANPDR  229 (557)
Q Consensus       216 ~Dg~I~iwd~~~~~  229 (557)
                      .|++|++|++.+..
T Consensus       320 ~D~~v~~w~v~~~~  333 (344)
T 4gqb_B          320 WDHQVVHHVVPTEP  333 (344)
T ss_dssp             TTSCEEEEECCC--
T ss_pred             CCCeEEEEECCCCC
Confidence            99999999997653

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=100.00  E-value=1.5e-33  Score=295.98  Aligned_cols=223  Identities=27%  Similarity=0.420  Sum_probs=205.2

Q ss_pred             EEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEEC
Q psy7057           4 LSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCL   66 (557)
Q Consensus         4 l~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~   66 (557)
                      +.+++.+|.+.|++++|+|++. |++|+.|++|++||+.+                +.+++++++|++|+.|++|++||+
T Consensus       142 ~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~  221 (410)
T 1vyh_C          142 FERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEV  221 (410)
T ss_dssp             CCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEET
T ss_pred             EEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEEC
Confidence            4578999999999999999998 88999999999999876                567788999999999999999999


Q ss_pred             CCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCC--------------
Q psy7057          67 ESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLND--------------  130 (557)
Q Consensus        67 ~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~--------------  130 (557)
                      .++.++.++.+|...|.++.+++++ .|++|+.|++|++|| .++.+...+.+|...|.+++|+|+              
T Consensus       222 ~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~  301 (410)
T 1vyh_C          222 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSET  301 (410)
T ss_dssp             TTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-
T ss_pred             CCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccc
Confidence            9999999999999999999999998 999999999999999 567788899999999999999985              


Q ss_pred             ------C-eEEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC---ceEeeCCc
Q psy7057         131 ------T-DFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ---NSFMIPAM  198 (557)
Q Consensus       131 ------~-~lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~  198 (557)
                            + .+++|+.|++|++||+++++++.++.+|...|.+++|  ++.+|++|+.|++|++||....   ..+..|..
T Consensus       302 ~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~  381 (410)
T 1vyh_C          302 KKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEH  381 (410)
T ss_dssp             ------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSS
T ss_pred             cccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCC
Confidence                  2 3779999999999999999999999999999999999  6779999999999999997654   67788999


Q ss_pred             cEEEEEEcCCCc-EEEEEcCCcEEEEecC
Q psy7057         199 SVWAVAILPNSD-IVTGSSDGIVRVFSAN  226 (557)
Q Consensus       199 ~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~  226 (557)
                      .|++++|+|++. |++|+.|++|++|+++
T Consensus       382 ~v~~l~~~~~~~~l~sgs~D~~i~vW~~r  410 (410)
T 1vyh_C          382 FVTSLDFHKTAPYVVTGSVDQTVKVWECR  410 (410)
T ss_dssp             CEEEEEECSSSSCEEEEETTSEEEEEC--
T ss_pred             cEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Confidence            999999999998 9999999999999863

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.1e-32  Score=272.30  Aligned_cols=269  Identities=25%  Similarity=0.388  Sum_probs=232.3

Q ss_pred             CcEEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEE
Q psy7057           1 MYKLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKL   63 (557)
Q Consensus         1 ~~kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~i   63 (557)
                      .+++.++|.+|.+.|++++| |++. |++|+.||.|++||+.+                +.+++++.+|++++.|+.+++
T Consensus         7 ~~~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~   85 (313)
T 3odt_A            7 GYQLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMING   85 (313)
T ss_dssp             CCEEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEE
T ss_pred             cHHHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEE
Confidence            36889999999999999999 7776 99999999999999876                677889999999999999999


Q ss_pred             EECCCC---eEEEEEcccCCcEEEEEEcCCCEEEEEECCCeEEEEeCCCcEEEEEeCCCCCEEEEEEeC-C-CeEEEEEC
Q psy7057          64 WCLESQ---QCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLN-D-TDFVSCSN  138 (557)
Q Consensus        64 wd~~~~---~~~~~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~-~-~~lvs~s~  138 (557)
                      |++...   +.+..+.+|...|.++.| ..+.+++++.|+.|++|| .+..+..+..|...|.+++++| + ..+++++.
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~l~~~~~d~~i~~~d-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~  163 (313)
T 3odt_A           86 VPLFATSGEDPLYTLIGHQGNVCSLSF-QDGVVISGSWDKTAKVWK-EGSLVYNLQAHNASVWDAKVVSFSENKFLTASA  163 (313)
T ss_dssp             EETTCCTTSCC-CEECCCSSCEEEEEE-ETTEEEEEETTSEEEEEE-TTEEEEEEECCSSCEEEEEEEETTTTEEEEEET
T ss_pred             EEeeecCCCCcccchhhcccCEEEEEe-cCCEEEEEeCCCCEEEEc-CCcEEEecccCCCceeEEEEccCCCCEEEEEEC
Confidence            998664   567888999999999999 345999999999999999 7788889999999999999987 4 45889999


Q ss_pred             CCeEEEEECCCCeEEEEEeC-CCCcEEEEEE-cCCEEEEEeCCCeEEEEECCCC---ceEeeCCccEEEEEEcCCCcEEE
Q psy7057         139 DASIRVWDSTTGKCVHTMYG-HPNFIYSVAA-HGDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVAILPNSDIVT  213 (557)
Q Consensus       139 Dg~I~vwd~~~~~~~~~~~~-h~~~V~~l~~-~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p~g~l~s  213 (557)
                      |+.|++||  ..+.+..+.. |...+.++++ ....+++++.|+.|++||+++.   ..+..|...|.+++|+|++.+++
T Consensus       164 d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~  241 (313)
T 3odt_A          164 DKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNGDIVS  241 (313)
T ss_dssp             TSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSCEEE
T ss_pred             CCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCCCEEE
Confidence            99999999  6778888887 8999999999 3335999999999999998765   56677889999999999999999


Q ss_pred             EEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCChhhHH
Q psy7057         214 GSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQAED  278 (557)
Q Consensus       214 g~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~~~~~~  278 (557)
                      ++.||.|++|++.+.+....  ...+...+..+.+.+...  +++++.||.|++|++..++....
T Consensus       242 ~~~dg~v~iwd~~~~~~~~~--~~~~~~~i~~~~~~~~~~--~~~~~~dg~i~iw~~~~~~~~~~  302 (313)
T 3odt_A          242 CGEDRTVRIWSKENGSLKQV--ITLPAISIWSVDCMSNGD--IIVGSSDNLVRIFSQEKSRWASE  302 (313)
T ss_dssp             EETTSEEEEECTTTCCEEEE--EECSSSCEEEEEECTTSC--EEEEETTSCEEEEESCGGGCCC-
T ss_pred             EecCCEEEEEECCCCceeEE--EeccCceEEEEEEccCCC--EEEEeCCCcEEEEeCCCCceeeh
Confidence            99999999999988765432  234566788888887765  67899999999999998766543

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=100.00  E-value=1.1e-32  Score=285.45  Aligned_cols=266  Identities=14%  Similarity=0.152  Sum_probs=219.9

Q ss_pred             cEEEEEeccCcccEEEEEEcCCC-c-EEEEECCCcEEEEcCCC------------------CCCCC-CCCEEEEEECCCe
Q psy7057           2 YKLSTALYGHSMDVRSLSVTPDG-C-ILSASRDKSAKLWKPND------------------LSPGA-KVNTLLSASWDMT   60 (557)
Q Consensus         2 ~kl~~~l~gH~~~V~~l~~spdg-~-l~sgs~Dg~V~iWd~~~------------------~~~~~-~~~~l~sgs~Dg~   60 (557)
                      +++.+.+.+|.+.|++++|+|++ + |++|+.||+|++||+.+                  +.+++ ++.+|++++.|++
T Consensus        63 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~  142 (383)
T 3ei3_B           63 YKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGA  142 (383)
T ss_dssp             CEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTE
T ss_pred             cceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCE
Confidence            67888999999999999999998 5 88999999999999975                  45666 5789999999999


Q ss_pred             EEEEECCCCeEEEEEccc---CCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcEEEEEeCCCCCEEEEEEeCCCe--EE
Q psy7057          61 AKLWCLESQQCKLTIRQH---EMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTD--FV  134 (557)
Q Consensus        61 i~iwd~~~~~~~~~l~~h---~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~~~--lv  134 (557)
                      |++||+.+ ..+..+..|   ...|.+++|+|++ .|++|+.|+.|++||.+++++..+.+|...|.+++|+|++.  ++
T Consensus       143 i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~  221 (383)
T 3ei3_B          143 TTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGHEIFKEKLHKAKVTHAEFNPRCDWLMA  221 (383)
T ss_dssp             EEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTSCEEEEEECSSSCEEEEEECSSCTTEEE
T ss_pred             EEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCCCEEEEeccCCCcEEEEEECCCCCCEEE
Confidence            99999986 555566544   4889999999988 99999999999999999999999999999999999999975  77


Q ss_pred             EEECCCeEEEEECCC----CeEEEEEeCCCCcEEEEEEc---CCEEEEEeCCCeEEEEECCCC---ceEeeCC-------
Q psy7057         135 SCSNDASIRVWDSTT----GKCVHTMYGHPNFIYSVAAH---GDLITSGGEDQCVCVYQNKAQ---NSFMIPA-------  197 (557)
Q Consensus       135 s~s~Dg~I~vwd~~~----~~~~~~~~~h~~~V~~l~~~---~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~-------  197 (557)
                      +++.|++|++||+++    +.++..+ +|...|.+++|+   +.+|++++.|+.|++||+++.   ..+..|.       
T Consensus       222 s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~  300 (383)
T 3ei3_B          222 TSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHL  300 (383)
T ss_dssp             EEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTS
T ss_pred             EEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccc
Confidence            999999999999987    6677777 699999999994   579999999999999997654   4444332       


Q ss_pred             ----------ccEEEEEEcCCCcEEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEE
Q psy7057         198 ----------MSVWAVAILPNSDIVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRV  267 (557)
Q Consensus       198 ----------~~v~~v~~~p~g~l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~Irv  267 (557)
                                ..+..++++|++++ +++.|+.|++||+.+++.........+...+..+.+.+... .+++++ ||.|+|
T Consensus       301 ~~~~~~~~p~~~~~~~~~s~dg~~-s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~-~l~s~s-d~~i~i  377 (383)
T 3ei3_B          301 TPIKATWHPMYDLIVAGRYPDDQL-LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGD-VLASGM-GFNILI  377 (383)
T ss_dssp             CCCCCEECSSSSEEEEECBCCTTT-CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSS-EEEEEE-TTEEEE
T ss_pred             cceEEeccCCCCceEEEecCCccc-ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCcc-EEEEec-CCcEEE
Confidence                      34455777777777 77899999999998877654333233455566667766655 467776 999999


Q ss_pred             EecCC
Q psy7057         268 FSANP  272 (557)
Q Consensus       268 W~~~~  272 (557)
                      |+++.
T Consensus       378 w~~~~  382 (383)
T 3ei3_B          378 WNRED  382 (383)
T ss_dssp             EECC-
T ss_pred             EecCC
Confidence            99874

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=100.00  E-value=7.4e-32  Score=294.22  Aligned_cols=263  Identities=32%  Similarity=0.520  Sum_probs=233.7

Q ss_pred             EEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC---------------CCCCCCCCEEEEEECCCeEEEEEC
Q psy7057           3 KLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND---------------LSPGAKVNTLLSASWDMTAKLWCL   66 (557)
Q Consensus         3 kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~---------------~~~~~~~~~l~sgs~Dg~i~iwd~   66 (557)
                      ++...+.+|...|++++|+|+++ |++++.|++|++|+...               +++++++..|++++.|++|++|++
T Consensus       253 ~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~  332 (577)
T 2ymu_A          253 QLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR  332 (577)
T ss_dssp             CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred             CEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCCcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence            46778999999999999999998 88999999999999764               567888999999999999999997


Q ss_pred             CCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEEE
Q psy7057          67 ESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRV  144 (557)
Q Consensus        67 ~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~v  144 (557)
                      .. ..+..+.+|...|.+++|+|++ .+++|+.|+.|++|+.+++.+..+.+|...|++++|+|++. |++++.|+.|++
T Consensus       333 ~~-~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~  411 (577)
T 2ymu_A          333 NG-QHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKL  411 (577)
T ss_dssp             TS-CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEE
T ss_pred             CC-CeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCCCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEE
Confidence            65 5667889999999999999998 99999999999999999999999999999999999999977 779999999999


Q ss_pred             EECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC--ceEeeCCccEEEEEEcCCCc-EEEEEcCCc
Q psy7057         145 WDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ--NSFMIPAMSVWAVAILPNSD-IVTGSSDGI  219 (557)
Q Consensus       145 wd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~--~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~  219 (557)
                      || .+++.+..+.+|...|.++++  ++++|++++.|++|++|+....  ..+..|...|++++|+|+++ |++++.|++
T Consensus       412 ~~-~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~  490 (577)
T 2ymu_A          412 WN-RNGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKT  490 (577)
T ss_dssp             EC-TTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSE
T ss_pred             Ee-CCCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCE
Confidence            99 468889999999999999999  6779999999999999996544  67788999999999999999 889999999


Q ss_pred             EEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecC
Q psy7057         220 VRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSAN  271 (557)
Q Consensus       220 I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~  271 (557)
                      |++|+.... ..  .....|...+..+.+.++.. .+++++.||.|+||+..
T Consensus       491 i~iw~~~~~-~~--~~~~~h~~~v~~l~~s~dg~-~l~s~~~dg~v~lwd~~  538 (577)
T 2ymu_A          491 VKLWNRNGQ-LL--QTLTGHSSSVRGVAFSPDGQ-TIASASDDKTVKLWNRN  538 (577)
T ss_dssp             EEEEETTSC-EE--EEEECCSSCEEEEEECTTSS-CEEEEETTSEEEEECTT
T ss_pred             EEEEcCCCC-EE--EEEeCCCCCEEEEEEcCCCC-EEEEEECcCEEEEEeCC
Confidence            999996533 22  23346778899998887655 58999999999999964

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=100.00  E-value=1.6e-33  Score=287.76  Aligned_cols=269  Identities=14%  Similarity=0.202  Sum_probs=222.4

Q ss_pred             cEEEEE-eccCcccEEEEEEcCC---Cc--EEEEECCCcEEEEcCCC---------------------CCCCCC----CC
Q psy7057           2 YKLSTA-LYGHSMDVRSLSVTPD---GC--ILSASRDKSAKLWKPND---------------------LSPGAK----VN   50 (557)
Q Consensus         2 ~kl~~~-l~gH~~~V~~l~~spd---g~--l~sgs~Dg~V~iWd~~~---------------------~~~~~~----~~   50 (557)
                      |+.... +.+|.+.|++++|+|+   +.  +++++.++.|++|++.+                     ++++++    +.
T Consensus         7 ~~~~~~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~   86 (366)
T 3k26_A            7 FKCVNSLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHP   86 (366)
T ss_dssp             CEEEEEEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCE
T ss_pred             EEEEEEeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCC
Confidence            444334 4589999999999984   43  77888888999999875                     335555    56


Q ss_pred             EEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcC-CC-EEEEEECCCeEEEEeC-CCcEEEEE---eCCCCCEEE
Q psy7057          51 TLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLA-NG-IIVTGCADKTIKLHSE-EGEFLKTL---TGHTDCVRG  124 (557)
Q Consensus        51 ~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~-~~-~l~sgs~dg~I~vwd~-~~~~~~~l---~~h~~~V~~  124 (557)
                      +|++|+.|++|++||+.+++.+..+.+|...|.+++|+| ++ .|++|+.|+.|++||. +++.+..+   .+|...|.+
T Consensus        87 ~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~  166 (366)
T 3k26_A           87 LLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLS  166 (366)
T ss_dssp             EEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEE
T ss_pred             EEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeE
Confidence            899999999999999999999999999999999999999 66 9999999999999994 56777777   689999999


Q ss_pred             EEEeCCCe-EEEEECCCeEEEEECCCCeEEEEE----------------------------eCCCCcEEEEEEcCCEEEE
Q psy7057         125 LAVLNDTD-FVSCSNDASIRVWDSTTGKCVHTM----------------------------YGHPNFIYSVAAHGDLITS  175 (557)
Q Consensus       125 l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~~~~~----------------------------~~h~~~V~~l~~~~~~l~s  175 (557)
                      ++|+|++. |++++.|+.|++||+++++.+..+                            ..|...|.++++++++|++
T Consensus       167 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~  246 (366)
T 3k26_A          167 ADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILS  246 (366)
T ss_dssp             EEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEETTEEEE
T ss_pred             EEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEcCCEEEE
Confidence            99999976 779999999999999876544333                            3499999999999999999


Q ss_pred             EeCCCeEEEEECCCC-----------------ceEeeCCccEEEEEEcCC--Cc-EEEEEcCCcEEEEecCCCCcch--h
Q psy7057         176 GGEDQCVCVYQNKAQ-----------------NSFMIPAMSVWAVAILPN--SD-IVTGSSDGIVRVFSANPDRQAE--D  233 (557)
Q Consensus       176 ~s~Dg~I~iwd~~~~-----------------~~~~~~~~~v~~v~~~p~--g~-l~sg~~Dg~I~iwd~~~~~~~~--~  233 (557)
                      ++.|+.|++||++..                 ..+..|...|++++|+|+  +. |++++.||.|++|++..++...  .
T Consensus       247 ~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~  326 (366)
T 3k26_A          247 KSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKC  326 (366)
T ss_dssp             ECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEE
T ss_pred             EecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccc
Confidence            999999999996542                 344567778999999999  87 8899999999999998876432  1


Q ss_pred             HHHhcc--cceeEEEeccCCCceeEEEEeCCCcEEEEecC
Q psy7057         234 AVQAQY--AEEVKKLKSANEQEIGGVKVSDDGIVRVFSAN  271 (557)
Q Consensus       234 ~~~~~~--~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~  271 (557)
                      .....+  ...+..+.+.+... .+++++.||.|++|++.
T Consensus       327 ~~~~~~~~~~~v~~~~~s~~~~-~l~s~~~dg~i~iwd~~  365 (366)
T 3k26_A          327 TTLTHHKCGAAIRQTSFSRDSS-ILIAVCDDASIWRWDRL  365 (366)
T ss_dssp             EEECCTTCCSCEEEEEECTTSS-EEEEEETTSEEEEEEC-
T ss_pred             eEEcccccCCceEEEEeCCCCC-eEEEEeCCCEEEEEEec
Confidence            122233  57888898887554 58999999999999975

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=100.00  E-value=1.6e-31  Score=269.80  Aligned_cols=258  Identities=16%  Similarity=0.246  Sum_probs=224.4

Q ss_pred             EeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC---------------------CCCCCCCCEEEEEECCCeEEEE
Q psy7057           7 ALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND---------------------LSPGAKVNTLLSASWDMTAKLW   64 (557)
Q Consensus         7 ~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~---------------------~~~~~~~~~l~sgs~Dg~i~iw   64 (557)
                      .+.+|.+.|++++|+|+++ |++++ ||.|++|++..                     +.+++++++|++++.|+.|++|
T Consensus        46 ~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~  124 (337)
T 1gxr_A           46 NTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIW  124 (337)
T ss_dssp             EEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEE
T ss_pred             eeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEE
Confidence            3447999999999999998 66666 99999999864                     4567789999999999999999


Q ss_pred             ECCCCe--EEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECC
Q psy7057          65 CLESQQ--CKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSND  139 (557)
Q Consensus        65 d~~~~~--~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~D  139 (557)
                      ++.+++  ....+..|...|.+++|+|++ .+++++.|+.|++|| .+++.+..+..|...|.+++|+|++. +++++.|
T Consensus       125 d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d  204 (337)
T 1gxr_A          125 DLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLD  204 (337)
T ss_dssp             ECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred             ECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecC
Confidence            999887  667788899999999999988 999999999999999 46677888999999999999999975 7799999


Q ss_pred             CeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC--ceEeeCCccEEEEEEcCCCc-EEEE
Q psy7057         140 ASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ--NSFMIPAMSVWAVAILPNSD-IVTG  214 (557)
Q Consensus       140 g~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~--~~~~~~~~~v~~v~~~p~g~-l~sg  214 (557)
                      +.|++||+++++.+..+. |...+.++++  +++.|++++.++.|++|++...  ..+..|...|.+++|+|+++ ++++
T Consensus       205 g~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  283 (337)
T 1gxr_A          205 NTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVST  283 (337)
T ss_dssp             SEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred             CcEEEEECCCCceEeeec-CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEEcCCccceeEEEECCCCCEEEEe
Confidence            999999999999888875 7888999999  6789999999999999998766  55667888999999999998 8899


Q ss_pred             EcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEec
Q psy7057         215 SSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSA  270 (557)
Q Consensus       215 ~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~  270 (557)
                      +.||.|++|++.+++...   ...+...+..+.+.+... .+++++.||.|++|++
T Consensus       284 ~~dg~i~~~~~~~~~~~~---~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~iw~~  335 (337)
T 1gxr_A          284 GKDNLLNAWRTPYGASIF---QSKESSSVLSCDISVDDK-YIVTGSGDKKATVYEV  335 (337)
T ss_dssp             ETTSEEEEEETTTCCEEE---EEECSSCEEEEEECTTSC-EEEEEETTSCEEEEEE
T ss_pred             cCCCcEEEEECCCCeEEE---EecCCCcEEEEEECCCCC-EEEEecCCCeEEEEEE
Confidence            999999999998876552   223566788888777654 5889999999999986

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.4e-31  Score=273.39  Aligned_cols=269  Identities=15%  Similarity=0.179  Sum_probs=231.6

Q ss_pred             EEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEE
Q psy7057           3 KLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWC   65 (557)
Q Consensus         3 kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd   65 (557)
                      .....|.+|.+.|++++|+|+++ |++++.||.|++||+.+                +.+++++++|++++.|++|++||
T Consensus        23 ~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd  102 (369)
T 3zwl_B           23 MKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWD  102 (369)
T ss_dssp             EEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEE
T ss_pred             cccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence            44577999999999999999998 88999999999999876                67788899999999999999999


Q ss_pred             CCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECC-----CeEEEEeCCC------------cEEEEEeCCCC--CEEEE
Q psy7057          66 LESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCAD-----KTIKLHSEEG------------EFLKTLTGHTD--CVRGL  125 (557)
Q Consensus        66 ~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~d-----g~I~vwd~~~------------~~~~~l~~h~~--~V~~l  125 (557)
                      +.+++++..+. |...|.+++|+|++ .+++++.+     +.|++||...            ..+..+..|..  .+.++
T Consensus       103 ~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (369)
T 3zwl_B          103 VSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVA  181 (369)
T ss_dssp             TTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEE
T ss_pred             CCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEE
Confidence            99999988888 88999999999998 89999998     9999999321            23455666776  99999


Q ss_pred             EEeCCCe-EEEEECCCeEEEEECCC-CeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC--ceEeeCCcc
Q psy7057         126 AVLNDTD-FVSCSNDASIRVWDSTT-GKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ--NSFMIPAMS  199 (557)
Q Consensus       126 ~~~~~~~-lvs~s~Dg~I~vwd~~~-~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~--~~~~~~~~~  199 (557)
                      +|+|++. +++++.|+.|++||+++ ++.+..+..|...|.+++|  ++.+|++++.|+.|++||+.+.  .....+...
T Consensus       182 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~  261 (369)
T 3zwl_B          182 GWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYETDCP  261 (369)
T ss_dssp             EECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSC
T ss_pred             EEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeecCCCC
Confidence            9999976 77999999999999998 7899999999999999999  6789999999999999998766  222336778


Q ss_pred             EEEEEEcCCCc-EEEEEcCC--------------cEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCc
Q psy7057         200 VWAVAILPNSD-IVTGSSDG--------------IVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGI  264 (557)
Q Consensus       200 v~~v~~~p~g~-l~sg~~Dg--------------~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~  264 (557)
                      +.+++|+|++. +++++.++              .+++|+..+.+...  ....+...+..+.+.+... .+++++.||.
T Consensus       262 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~--~~~~~~~~v~~~~~s~~~~-~l~s~~~dg~  338 (369)
T 3zwl_B          262 LNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIG--RVQGHFGPLNTVAISPQGT-SYASGGEDGF  338 (369)
T ss_dssp             EEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEE--EEECCSSCEEEEEECTTSS-EEEEEETTSE
T ss_pred             ceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchh--heecccCcEEEEEECCCCC-EEEEEcCCCe
Confidence            99999999999 88888888              89999998876543  2345677888898887554 6899999999


Q ss_pred             EEEEecCCChh
Q psy7057         265 VRVFSANPDRQ  275 (557)
Q Consensus       265 IrvW~~~~~~~  275 (557)
                      |+||++..+..
T Consensus       339 v~iw~~~~~~~  349 (369)
T 3zwl_B          339 IRLHHFEKSYF  349 (369)
T ss_dssp             EEEEEECHHHH
T ss_pred             EEEEECccccc
Confidence            99999987643

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=100.00  E-value=9.2e-33  Score=286.52  Aligned_cols=270  Identities=14%  Similarity=0.135  Sum_probs=227.6

Q ss_pred             EEEEEeccCcccEEEEEEcCCCcEEEEECCCcEEEEcCCC----------------------CCCCCC----C---CEEE
Q psy7057           3 KLSTALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPND----------------------LSPGAK----V---NTLL   53 (557)
Q Consensus         3 kl~~~l~gH~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~----------------------~~~~~~----~---~~l~   53 (557)
                      ++.+.|.+|.+.|++++|+| ..|++|+.||+|++|++..                      +.++++    +   .+|+
T Consensus         7 ~~~~~~~~h~~~i~~~~~~~-~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~   85 (397)
T 1sq9_A            7 ATANAGKAHDADIFSVSACN-SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVA   85 (397)
T ss_dssp             EEEEESSCSSSCEEEEEECS-SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEE
T ss_pred             hhhhhhhhhhcCeEEEEecC-CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEE
Confidence            56778899999999999999 5699999999999999865                      455666    8   8999


Q ss_pred             EEECCCeEEEEECCCCeE-----EEEEccc-----CCcEEEEEEc----CCC-E-EEEEECCCeEEEEeCC-------Cc
Q psy7057          54 SASWDMTAKLWCLESQQC-----KLTIRQH-----EMAVWGVIQL----ANG-I-IVTGCADKTIKLHSEE-------GE  110 (557)
Q Consensus        54 sgs~Dg~i~iwd~~~~~~-----~~~l~~h-----~~~V~~l~~~----~~~-~-l~sgs~dg~I~vwd~~-------~~  110 (557)
                      +++.|+.|++|++.+++.     ...+..|     ...|.+++|+    |++ . |++++.|+.|++||..       +.
T Consensus        86 s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~  165 (397)
T 1sq9_A           86 TTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSL  165 (397)
T ss_dssp             EEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHT
T ss_pred             EEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccc
Confidence            999999999999988876     8889888     5999999999    888 7 9999999999999943       34


Q ss_pred             EEE-----EE-------eCCCCCEEEEEEeCCCeEEEEECCCeEEEEECCCCeEEEEEeC---C---CCcEEEEEE--cC
Q psy7057         111 FLK-----TL-------TGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYG---H---PNFIYSVAA--HG  170 (557)
Q Consensus       111 ~~~-----~l-------~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~~~~~~~~---h---~~~V~~l~~--~~  170 (557)
                      .+.     .+       ..|...|.+++|+|++.+++++.|+.|++||+++++++..+..   |   ...|.+++|  ++
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~  245 (397)
T 1sq9_A          166 TLNWSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQG  245 (397)
T ss_dssp             TTCCCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSST
T ss_pred             eeeccCcceeeeeeccccCCCCCceEEEECCCceEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCC
Confidence            444     66       4488999999999988666999999999999999999999998   9   999999999  67


Q ss_pred             CEEEEEeCC---CeEEEEECCCC---ceEee-------------CCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCc
Q psy7057         171 DLITSGGED---QCVCVYQNKAQ---NSFMI-------------PAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQ  230 (557)
Q Consensus       171 ~~l~s~s~D---g~I~iwd~~~~---~~~~~-------------~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~  230 (557)
                      .+|++++.|   +.|++||+++.   ..+..             |...|.+++|+|++. |++++.||.|++|++.+.+.
T Consensus       246 ~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~  325 (397)
T 1sq9_A          246 SLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKER  325 (397)
T ss_dssp             TEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEE
T ss_pred             CEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCce
Confidence            899999999   99999998765   45556             788999999999998 88999999999999988765


Q ss_pred             chhHHH----hcc---------------cceeEEEeccCCCc---------eeEEEEeCCCcEEEEecCCC
Q psy7057         231 AEDAVQ----AQY---------------AEEVKKLKSANEQE---------IGGVKVSDDGIVRVFSANPD  273 (557)
Q Consensus       231 ~~~~~~----~~~---------------~~~v~~l~~~~~~~---------~~~vs~s~DG~IrvW~~~~~  273 (557)
                      ......    ..+               ...+..+.+.+...         ..+++++.||.|++|++..+
T Consensus       326 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g  396 (397)
T 1sq9_A          326 ITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGG  396 (397)
T ss_dssp             EEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC-
T ss_pred             eEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCC
Confidence            433220    033               67788998887752         57899999999999998764

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=100.00  E-value=4.5e-32  Score=278.27  Aligned_cols=267  Identities=14%  Similarity=0.173  Sum_probs=223.3

Q ss_pred             EeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC------------------CCCCCCCCEEEEEECCCeEEEEECC
Q psy7057           7 ALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND------------------LSPGAKVNTLLSASWDMTAKLWCLE   67 (557)
Q Consensus         7 ~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~------------------~~~~~~~~~l~sgs~Dg~i~iwd~~   67 (557)
                      .+..|.++|++++|+|+++ |++++.|+.|++||+.+                  +.+++++.+|++++.|+.|++||+.
T Consensus         3 ~~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~   82 (372)
T 1k8k_C            3 YHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLK   82 (372)
T ss_dssp             EEESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEE
T ss_pred             eecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECC
Confidence            3566999999999999998 88999999999999765                  5677889999999999999999999


Q ss_pred             CCeEEEE--EcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCC-Cc---EE-EEEeCCCCCEEEEEEeCCCe-EEEEEC
Q psy7057          68 SQQCKLT--IRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEE-GE---FL-KTLTGHTDCVRGLAVLNDTD-FVSCSN  138 (557)
Q Consensus        68 ~~~~~~~--l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~-~~---~~-~~l~~h~~~V~~l~~~~~~~-lvs~s~  138 (557)
                      +++....  +..|...|.+++|+|++ .|++++.|+.|++||.. +.   .. ....+|...|.+++|+|++. |++++.
T Consensus        83 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~  162 (372)
T 1k8k_C           83 GRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSC  162 (372)
T ss_dssp             TTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEET
T ss_pred             CCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcC
Confidence            8875544  46799999999999988 99999999999999933 22   23 33367899999999999976 779999


Q ss_pred             CCeEEEEEC------------------CCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC---ceEee
Q psy7057         139 DASIRVWDS------------------TTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ---NSFMI  195 (557)
Q Consensus       139 Dg~I~vwd~------------------~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~---~~~~~  195 (557)
                      |+.|++||+                  ..++++..+..|...|.++++  ++.+|++++.|+.|++||+++.   ..+..
T Consensus       163 dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~  242 (372)
T 1k8k_C          163 DFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLAS  242 (372)
T ss_dssp             TSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEEC
T ss_pred             CCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEcc
Confidence            999999995                  467899999999999999999  6779999999999999997655   56677


Q ss_pred             CCccEEEEEEcCCCcEEEEEcCCcEEEEecCC--CCc-------------------ch------------------hHHH
Q psy7057         196 PAMSVWAVAILPNSDIVTGSSDGIVRVFSANP--DRQ-------------------AE------------------DAVQ  236 (557)
Q Consensus       196 ~~~~v~~v~~~p~g~l~sg~~Dg~I~iwd~~~--~~~-------------------~~------------------~~~~  236 (557)
                      |...|.+++|+|++.+++++.|+.|++|++..  +..                   ..                  ....
T Consensus       243 ~~~~v~~~~~~~~~~~l~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  322 (372)
T 1k8k_C          243 ETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLD  322 (372)
T ss_dssp             SSCCEEEEEEEETTEEEEEETTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCS
T ss_pred             CCCCeEEEEEecCCCEEEEEeCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCcccccccc
Confidence            88899999999999966666999999999977  310                   00                  0111


Q ss_pred             hcccceeEEEeccCCCc---eeEEEEeCCCcEEEEecCCC
Q psy7057         237 AQYAEEVKKLKSANEQE---IGGVKVSDDGIVRVFSANPD  273 (557)
Q Consensus       237 ~~~~~~v~~l~~~~~~~---~~~vs~s~DG~IrvW~~~~~  273 (557)
                      ..|...+..+.+.+.+.   ..+++++.||.|++|++...
T Consensus       323 ~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~  362 (372)
T 1k8k_C          323 SLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSL  362 (372)
T ss_dssp             SSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHH
T ss_pred             ccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecCh
Confidence            36778899998776665   67999999999999997643

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=100.00  E-value=2e-31  Score=272.41  Aligned_cols=221  Identities=22%  Similarity=0.277  Sum_probs=197.8

Q ss_pred             EEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC--------------------CCCCCCCCEEEEEECCCeE
Q psy7057           3 KLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND--------------------LSPGAKVNTLLSASWDMTA   61 (557)
Q Consensus         3 kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~--------------------~~~~~~~~~l~sgs~Dg~i   61 (557)
                      +....+..|...|.+++|+|++. |++|+.|+.|++|++..                    +.+.+ ...+++++.|++|
T Consensus        88 ~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~d~~i  166 (340)
T 1got_B           88 NKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLD-DNQIVTSSGDTTC  166 (340)
T ss_dssp             CEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEE-TTEEEEEETTSCE
T ss_pred             CcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECC-CCcEEEEECCCcE
Confidence            35677889999999999999998 88999999999999864                    12222 3469999999999


Q ss_pred             EEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEEC
Q psy7057          62 KLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSN  138 (557)
Q Consensus        62 ~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~  138 (557)
                      ++||+.+++++.++.+|...|.+++|+|++ .+++|+.|++|++|| .++.++..+.+|...|++++|+|++. |++|+.
T Consensus       167 ~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~  246 (340)
T 1got_B          167 ALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSD  246 (340)
T ss_dssp             EEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred             EEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcC
Confidence            999999999999999999999999999988 999999999999999 57788899999999999999999976 779999


Q ss_pred             CCeEEEEECCCCeEEEEEeC--CCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC---ceEeeCCccEEEEEEcCCCc-
Q psy7057         139 DASIRVWDSTTGKCVHTMYG--HPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVAILPNSD-  210 (557)
Q Consensus       139 Dg~I~vwd~~~~~~~~~~~~--h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p~g~-  210 (557)
                      |++|++||+++++.+..+..  +...|.+++|  ++.+|++|+.|+.|++||....   ..+..|...|.+++|+|++. 
T Consensus       247 d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~  326 (340)
T 1got_B          247 DATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMA  326 (340)
T ss_dssp             TSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSC
T ss_pred             CCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCE
Confidence            99999999999988887753  3357999999  6789999999999999997655   56788999999999999998 


Q ss_pred             EEEEEcCCcEEEEe
Q psy7057         211 IVTGSSDGIVRVFS  224 (557)
Q Consensus       211 l~sg~~Dg~I~iwd  224 (557)
                      |++|+.|++|+||+
T Consensus       327 l~s~s~D~~i~iWd  340 (340)
T 1got_B          327 VATGSWDSFLKIWN  340 (340)
T ss_dssp             EEEEETTSCEEEEC
T ss_pred             EEEEcCCccEEecC
Confidence            99999999999996

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=100.00  E-value=6.6e-32  Score=270.68  Aligned_cols=223  Identities=16%  Similarity=0.225  Sum_probs=190.4

Q ss_pred             EEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC------------------CCCCC--CCCEEEEEECCCeEEE
Q psy7057           5 STALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND------------------LSPGA--KVNTLLSASWDMTAKL   63 (557)
Q Consensus         5 ~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~------------------~~~~~--~~~~l~sgs~Dg~i~i   63 (557)
                      +..+.+|.+.|++++|+|+|+ |++|+.|++|+||++..                  +.+++  .+.+|++|+.|++|++
T Consensus         2 ~~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~i   81 (297)
T 2pm7_B            2 VVIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMI   81 (297)
T ss_dssp             CEECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEE
T ss_pred             ceeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEE
Confidence            356889999999999999998 99999999999999852                  34443  3789999999999999


Q ss_pred             EECCCCe--EEEEEcccCCcEEEEEEcCC--C-EEEEEECCCeEEEEeCCCc---EEEEEeCCCCCEEEEEEeCCC----
Q psy7057          64 WCLESQQ--CKLTIRQHEMAVWGVIQLAN--G-IIVTGCADKTIKLHSEEGE---FLKTLTGHTDCVRGLAVLNDT----  131 (557)
Q Consensus        64 wd~~~~~--~~~~l~~h~~~V~~l~~~~~--~-~l~sgs~dg~I~vwd~~~~---~~~~l~~h~~~V~~l~~~~~~----  131 (557)
                      ||+.+++  .+..+.+|...|.+++|+|+  + .|++|+.|++|++||....   ....+.+|...|.+++|+|++    
T Consensus        82 Wd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~  161 (297)
T 2pm7_B           82 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEED  161 (297)
T ss_dssp             EEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC----
T ss_pred             EEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCccccc
Confidence            9998874  56778889999999999996  5 8999999999999995322   246678999999999999862    


Q ss_pred             ----------eEEEEECCCeEEEEECCCCe----EEEEEeCCCCcEEEEEEcC-----CEEEEEeCCCeEEEEECCCC--
Q psy7057         132 ----------DFVSCSNDASIRVWDSTTGK----CVHTMYGHPNFIYSVAAHG-----DLITSGGEDQCVCVYQNKAQ--  190 (557)
Q Consensus       132 ----------~lvs~s~Dg~I~vwd~~~~~----~~~~~~~h~~~V~~l~~~~-----~~l~s~s~Dg~I~iwd~~~~--  190 (557)
                                .|++|+.|++|++||+++++    +..++.+|...|++++|++     .+|++++.|++|++||....  
T Consensus       162 ~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~  241 (297)
T 2pm7_B          162 GEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQG  241 (297)
T ss_dssp             --------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTS
T ss_pred             ccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCC
Confidence                      58899999999999998765    6778899999999999943     58999999999999996542  


Q ss_pred             ----ceE--eeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCC
Q psy7057         191 ----NSF--MIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANP  227 (557)
Q Consensus       191 ----~~~--~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~  227 (557)
                          ..+  ..|...|++++|+|++. |++++.|++|+||+...
T Consensus       242 ~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~  285 (297)
T 2pm7_B          242 PWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL  285 (297)
T ss_dssp             CCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred             ccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence                122  34677899999999998 99999999999999763

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=100.00  E-value=1.1e-31  Score=280.86  Aligned_cols=256  Identities=16%  Similarity=0.189  Sum_probs=216.6

Q ss_pred             EEEEEEcCCCc-EEEEECCCcEEEEcCCC---------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEccc
Q psy7057          15 VRSLSVTPDGC-ILSASRDKSAKLWKPND---------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQH   78 (557)
Q Consensus        15 V~~l~~spdg~-l~sgs~Dg~V~iWd~~~---------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h   78 (557)
                      +++++|+|+++ |++++.|+.|++||+.+               ..+.+++++|++|+.|+.|++||+.+++....+.+|
T Consensus        59 ~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h  138 (420)
T 3vl1_A           59 GKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRADYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAH  138 (420)
T ss_dssp             CTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSCCEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSS
T ss_pred             ccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecCCceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccc
Confidence            45899999998 99999999999999876               245678899999999999999999999988888899


Q ss_pred             CCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEEEEECCCCeEEEE
Q psy7057          79 EMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHT  155 (557)
Q Consensus        79 ~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~~~~  155 (557)
                      ...|.+++|+|++ .|++|+.|++|++|| .+++.+..+.+|...|.+++|+|++. |++++.|++|++||+++++++..
T Consensus       139 ~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~  218 (420)
T 3vl1_A          139 VSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHT  218 (420)
T ss_dssp             SSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEE
T ss_pred             cCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEE
Confidence            9999999999998 999999999999999 56778889999999999999999976 77999999999999999999999


Q ss_pred             EeC---CCCcEEEEEE-----------------------cCCEEEEEeCCCeEEEEECCCCc---eE-eeCCccEEEEEE
Q psy7057         156 MYG---HPNFIYSVAA-----------------------HGDLITSGGEDQCVCVYQNKAQN---SF-MIPAMSVWAVAI  205 (557)
Q Consensus       156 ~~~---h~~~V~~l~~-----------------------~~~~l~s~s~Dg~I~iwd~~~~~---~~-~~~~~~v~~v~~  205 (557)
                      +..   |...+.++++                       ++++|++++.|+.|++||++...   .+ ..|...|.+++|
T Consensus       219 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~  298 (420)
T 3vl1_A          219 FNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTV  298 (420)
T ss_dssp             ECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEE
T ss_pred             eecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEE
Confidence            875   4556666665                       45689999999999999987662   22 236678999999


Q ss_pred             cCCCc--EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCC
Q psy7057         206 LPNSD--IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANP  272 (557)
Q Consensus       206 ~p~g~--l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~  272 (557)
                      +|++.  +++|+.||.|++||+.+...........+...+..+.+.  ....+++++.||.|++|++..
T Consensus       299 ~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~l~s~~~d~~v~iw~~~~  365 (420)
T 3vl1_A          299 DGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYFA--AGALFVSSGFDTSIKLDIISD  365 (420)
T ss_dssp             CSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEEE--TTEEEEEETTTEEEEEEEECC
T ss_pred             eCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEeC--CCCEEEEecCCccEEEEeccC
Confidence            99987  889999999999999876542222222245567777554  234789999999999999876

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=100.00  E-value=9.7e-32  Score=273.87  Aligned_cols=269  Identities=15%  Similarity=0.160  Sum_probs=219.4

Q ss_pred             EEEEeccCcccEEEEEEcCCCc-EE-EEEC---CCcEEEEcCCC-----------------CCCCCC---CCEEEEEECC
Q psy7057           4 LSTALYGHSMDVRSLSVTPDGC-IL-SASR---DKSAKLWKPND-----------------LSPGAK---VNTLLSASWD   58 (557)
Q Consensus         4 l~~~l~gH~~~V~~l~~spdg~-l~-sgs~---Dg~V~iWd~~~-----------------~~~~~~---~~~l~sgs~D   58 (557)
                      +...+++|.+.|++++|+|++. ++ +|+.   |++|++||+.+                 +.++++   +.+|++|+.|
T Consensus        10 ~~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d   89 (357)
T 3i2n_A           10 IAHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFG   89 (357)
T ss_dssp             EEEEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETT
T ss_pred             hhhhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCC
Confidence            3456788999999999999985 54 5655   99999999876                 566776   6999999999


Q ss_pred             CeEEEEECCCCe-EEEEEcccCCcEEEEEE------cCCC-EEEEEECCCeEEEEeC-CCc-EEEEEeCCCC----CEEE
Q psy7057          59 MTAKLWCLESQQ-CKLTIRQHEMAVWGVIQ------LANG-IIVTGCADKTIKLHSE-EGE-FLKTLTGHTD----CVRG  124 (557)
Q Consensus        59 g~i~iwd~~~~~-~~~~l~~h~~~V~~l~~------~~~~-~l~sgs~dg~I~vwd~-~~~-~~~~l~~h~~----~V~~  124 (557)
                      +.|++||+.+++ ++..+.+|...|.++.|      +|++ .|++++.|+.|++||. .+. ++..+..|..    .|.+
T Consensus        90 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~  169 (357)
T 3i2n_A           90 GNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWT  169 (357)
T ss_dssp             SCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEE
T ss_pred             CeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEE
Confidence            999999999987 88899999999999965      5666 9999999999999994 333 6777766654    8999


Q ss_pred             EE----EeCCCe-EEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEEc-----CCEEEEEeCCCeEEEEECCCC---c
Q psy7057         125 LA----VLNDTD-FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAH-----GDLITSGGEDQCVCVYQNKAQ---N  191 (557)
Q Consensus       125 l~----~~~~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~~-----~~~l~s~s~Dg~I~iwd~~~~---~  191 (557)
                      ++    ++|++. +++++.|+.|++||++++++... ..|...|.+++++     +..|++++.|+.|++||++..   .
T Consensus       170 ~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~  248 (357)
T 3i2n_A          170 VAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTK  248 (357)
T ss_dssp             EEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTT
T ss_pred             EEEEeccCCCCCEEEEEccCCeEEEEECccCceeee-cCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCccc
Confidence            98    566766 77999999999999999887554 5689999999994     478999999999999996543   3


Q ss_pred             eEe-----eCCccEEEEEEcCCCc--EEEEEcCCcEEEEecCCCCcc-----------------hhHHHhcccceeEEEe
Q psy7057         192 SFM-----IPAMSVWAVAILPNSD--IVTGSSDGIVRVFSANPDRQA-----------------EDAVQAQYAEEVKKLK  247 (557)
Q Consensus       192 ~~~-----~~~~~v~~v~~~p~g~--l~sg~~Dg~I~iwd~~~~~~~-----------------~~~~~~~~~~~v~~l~  247 (557)
                      .+.     .|...|++++|+|++.  +++++.||.|++|++......                 .......+...+..+.
T Consensus       249 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~  328 (357)
T 3i2n_A          249 GFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLD  328 (357)
T ss_dssp             EEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEE
T ss_pred             ceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEE
Confidence            333     7889999999999987  789999999999999765432                 1223345677889999


Q ss_pred             ccCCCceeEEEEeCCCcEEEEecCCC
Q psy7057         248 SANEQEIGGVKVSDDGIVRVFSANPD  273 (557)
Q Consensus       248 ~~~~~~~~~vs~s~DG~IrvW~~~~~  273 (557)
                      +.+.....+++++.||.|+||++...
T Consensus       329 ~s~~~~~l~~s~~~d~~i~iw~~~~~  354 (357)
T 3i2n_A          329 WSPDKRGLCVCSSFDQTVRVLIVTKL  354 (357)
T ss_dssp             ECSSSTTEEEEEETTSEEEEEEECC-
T ss_pred             EcCCCCeEEEEecCCCcEEEEECCCc
Confidence            98887765569999999999998754

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=100.00  E-value=5.2e-32  Score=279.10  Aligned_cols=222  Identities=18%  Similarity=0.156  Sum_probs=191.6

Q ss_pred             EeccCcccEEEEEEcCCCcEEEEECCCcEEEEcCCC--------------------CCCCCCCCEEEEEECCCeEEEEEC
Q psy7057           7 ALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPND--------------------LSPGAKVNTLLSASWDMTAKLWCL   66 (557)
Q Consensus         7 ~l~gH~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~--------------------~~~~~~~~~l~sgs~Dg~i~iwd~   66 (557)
                      ...+|...|++++|+|++++++++.||+|+|||+.+                    +++++++.+|++|+.|++|++||+
T Consensus        89 ~~~~~~~~V~~~~~s~d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~  168 (357)
T 4g56_B           89 AGVQTEAGVTDVAWVSEKGILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDL  168 (357)
T ss_dssp             EEEECSSCEEEEEEETTTEEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEET
T ss_pred             ccCCCCCCEEEEEEcCCCCEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEEC
Confidence            345789999999999999999999999999999865                    567888999999999999999999


Q ss_pred             CCCeEEEEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEeC-CCcEEEEE--eCCCCCEEEEEEeCCC-e-EEEEECC
Q psy7057          67 ESQQCKLTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHSE-EGEFLKTL--TGHTDCVRGLAVLNDT-D-FVSCSND  139 (557)
Q Consensus        67 ~~~~~~~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~-~~~~~~~l--~~h~~~V~~l~~~~~~-~-lvs~s~D  139 (557)
                      .+++++..+.+|...|.+++|++++  .+++++.|++|++||. +++++..+  ..|...+.+++|+|++ . |++|+.|
T Consensus       169 ~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d  248 (357)
T 4g56_B          169 SQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDET  248 (357)
T ss_dssp             TTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESS
T ss_pred             CCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecc
Confidence            9999999999999999999999976  7999999999999994 45554443  4577889999999974 3 6799999


Q ss_pred             CeEEEEECCCCeEEEEEeCCCCcEEEEEE--cC-CEEEEEeCCCeEEEEECCCC--ceEeeCCccEEEEEEcC-CCc-EE
Q psy7057         140 ASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HG-DLITSGGEDQCVCVYQNKAQ--NSFMIPAMSVWAVAILP-NSD-IV  212 (557)
Q Consensus       140 g~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~-~~l~s~s~Dg~I~iwd~~~~--~~~~~~~~~v~~v~~~p-~g~-l~  212 (557)
                      +.|++||+++++++.++.+|...|++++|  ++ .+|++|+.|++|++||..+.  .....|...|++|+|+| ++. |+
T Consensus       249 ~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~~H~~~V~~vafsP~d~~~l~  328 (357)
T 4g56_B          249 GNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDLSHRDFVTGVAWSPLDHSKFT  328 (357)
T ss_dssp             SCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEECCCSSCEEEEEECSSSTTEEE
T ss_pred             cceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEECCCCCCEEEEEEeCCCCCEEE
Confidence            99999999999999999999999999999  44 57999999999999998766  34456888999999998 666 88


Q ss_pred             EEEcCCcEEEEecCCC
Q psy7057         213 TGSSDGIVRVFSANPD  228 (557)
Q Consensus       213 sg~~Dg~I~iwd~~~~  228 (557)
                      +++.||+|++|++...
T Consensus       329 s~s~Dg~v~iW~~~~~  344 (357)
T 4g56_B          329 TVGWDHKVLHHHLPSE  344 (357)
T ss_dssp             EEETTSCEEEEECC--
T ss_pred             EEcCCCeEEEEECCCC
Confidence            9999999999999754

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=100.00  E-value=3.1e-31  Score=266.67  Aligned_cols=229  Identities=20%  Similarity=0.271  Sum_probs=199.1

Q ss_pred             CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCC
Q psy7057          43 LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTD  120 (557)
Q Consensus        43 ~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~  120 (557)
                      ++++|++.+|++|+.|++|++||+.+++.+..+..|..+|.+++|+|++ .|++|+.|++|++|| .+++++..+.+|..
T Consensus        19 ~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~   98 (304)
T 2ynn_A           19 IDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPD   98 (304)
T ss_dssp             EEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSS
T ss_pred             EEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCC
Confidence            5678889999999999999999999999999999999999999999988 999999999999999 57888999999999


Q ss_pred             CEEEEEEeCCCe-EEEEECCCeEEEEECCCC-eEEEEEeCCCCcEEEEEEc---CCEEEEEeCCCeEEEEECCCC---ce
Q psy7057         121 CVRGLAVLNDTD-FVSCSNDASIRVWDSTTG-KCVHTMYGHPNFIYSVAAH---GDLITSGGEDQCVCVYQNKAQ---NS  192 (557)
Q Consensus       121 ~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~-~~~~~~~~h~~~V~~l~~~---~~~l~s~s~Dg~I~iwd~~~~---~~  192 (557)
                      .|++++|+|++. +++|+.|++|++||++++ .+...+.+|...|.+++|+   +..|++|+.|++|++||++..   ..
T Consensus        99 ~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~  178 (304)
T 2ynn_A           99 YIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFT  178 (304)
T ss_dssp             CEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEE
T ss_pred             cEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccce
Confidence            999999999976 779999999999999877 5667889999999999993   468999999999999997654   22


Q ss_pred             E-eeCCccEEEEEEcC--CCc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEE
Q psy7057         193 F-MIPAMSVWAVAILP--NSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVF  268 (557)
Q Consensus       193 ~-~~~~~~v~~v~~~p--~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW  268 (557)
                      + ..+...+..++++|  ++. +++|+.|++|++||+++.+..  .....|...+..+.+.+... .+++++.||+|++|
T Consensus       179 ~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~--~~~~~h~~~v~~~~~~p~~~-~l~s~s~Dg~i~iW  255 (304)
T 2ynn_A          179 LTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCV--ATLEGHMSNVSFAVFHPTLP-IIISGSEDGTLKIW  255 (304)
T ss_dssp             EECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEE--EEEECCSSCEEEEEECSSSS-EEEEEETTSCEEEE
T ss_pred             eccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccc--eeeCCCCCCEEEEEECCCCC-EEEEEcCCCeEEEE
Confidence            3 34557899999987  455 899999999999999877644  23456777888888877665 68999999999999


Q ss_pred             ecCCCh
Q psy7057         269 SANPDR  274 (557)
Q Consensus       269 ~~~~~~  274 (557)
                      ++.+.+
T Consensus       256 d~~~~~  261 (304)
T 2ynn_A          256 NSSTYK  261 (304)
T ss_dssp             ETTTCC
T ss_pred             ECCCCc
Confidence            987653

>3pst_A Protein DOA1; protein degradation, CDC48, ubiquitin, nuclear protein; 2.00A {Saccharomyces cerevisiae} PDB: 3psp_A

Probab=100.00  E-value=1.9e-35  Score=299.79  Aligned_cols=118  Identities=37%  Similarity=0.697  Sum_probs=57.5

Q ss_pred             CCCcccccCCCccCccEEEEee-CCeEEEEEEecCCCceeEeeEEecCCCCccccCCeeEecceeeeeEEEEecCCCCCc
Q psy7057         307 LPGKEVLYEPGKADGDVKMVRE-GSTVVAYSWSEASREWNKLGDVMGSAGGTQESSGKVLYQGKEYDFVFSVDIEEGKPP  385 (557)
Q Consensus       307 l~~~~~~~~~G~~~~~~~~~~~-g~~~~~~~w~~~~~~W~~~g~v~~~~~~~~~~~~~~~~~g~~~d~v~~v~~~~g~~~  385 (557)
                      ||+.+.+..||+++|+++++|+ ++++++|+|+.  ++|+++|+|||+..+                             
T Consensus        34 lp~~e~l~~~G~~~Gq~~~v~~~~g~v~ay~ws~--~~W~~iG~Vv~~~~~-----------------------------   82 (425)
T 3pst_A           34 SSPYEILQSPGRKEGQIVVVKSPQGTIEAHQFSN--SSWKKVGDVVGAGAT-----------------------------   82 (425)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             CCCHHHhcCCCCCCCeEEEEECCCCCEEEEEEcC--CceeEEeEEecCCCC-----------------------------
Confidence            9999999999999999999997 58899999995  899999999975200                             


Q ss_pred             ccCCCccCCChHHHHHHHHHHcCCChHHHHHHHHHHHhcCCCCCCCCccceeeeeeeccCCCCCCCCCccCCCccccccc
Q psy7057         386 LKLPYNVSEDPWHAAQAFIHTHHLSQMFLEQVANFIMTNSKSKQGPTEYDFVFSVDIEEGKPPLKLPYNVSEDPWHAAQA  465 (557)
Q Consensus       386 ~~l~~n~~~~~~~~a~~~~~~~~l~~~~~~~v~~~i~~~~~~~~~g~~yd~vf~vd~~~g~p~~klp~n~~~~p~~~a~~  465 (557)
                                                          .+..|..|+||||||||||||+||+||||||||++||||+||||
T Consensus        83 ------------------------------------~~~~k~~~~Gk~YDyvf~Vdi~~g~p~lkLpyN~~~np~~~A~~  126 (425)
T 3pst_A           83 ------------------------------------GNDKKIEFEGKTYDYVFDVDIEDGKPPLKLPINVSDNPYTAADN  126 (425)
T ss_dssp             ---------------------------------------CCEEETTEEESEEEEECCSTTCCCEEEEECTTCCHHHHHHH
T ss_pred             ------------------------------------CCCCceeecCcccceEEEEEcCCCCccccCCccCCCCHHHHHHH
Confidence                                                02345578999999999999999999999999999888877776


Q ss_pred             ccccCCCceecccCCCCCcccccccCCChHHHHHhhhhcCCCChHHHHHHHHHHHhcccCC
Q psy7057         466 FIHTHHLTSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHLSQMFLEQVANFIMTNSKSK  526 (557)
Q Consensus       466 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v~~fi~~n~~~~  526 (557)
                      ||                                   ++|+||++||||||+||++||+++
T Consensus       127 Fi-----------------------------------~~~~L~~~y~~qi~~FI~~N~~~~  152 (425)
T 3pst_A          127 FL-----------------------------------ARYELPMSYRDQVVQLILKNTNGI  152 (425)
T ss_dssp             HH-----------------------------------HHHTCCGGGHHHHHHHHHHHC---
T ss_pred             HH-----------------------------------HHcCCCHHHHHHHHHHHHhcCCCc
Confidence            55                                   457999999999999999999854

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=100.00  E-value=5.4e-32  Score=285.31  Aligned_cols=266  Identities=12%  Similarity=0.188  Sum_probs=214.6

Q ss_pred             EEEEEe-ccCcccEEEEEEcC-CCc-EEEEECCCcEEEEcCCC---------------------CCCCCCCCEEEEEECC
Q psy7057           3 KLSTAL-YGHSMDVRSLSVTP-DGC-ILSASRDKSAKLWKPND---------------------LSPGAKVNTLLSASWD   58 (557)
Q Consensus         3 kl~~~l-~gH~~~V~~l~~sp-dg~-l~sgs~Dg~V~iWd~~~---------------------~~~~~~~~~l~sgs~D   58 (557)
                      ++..+| .+|.+.|++++|+| ++. |++|+.||+|++||+..                     +.+++++.+|++|+.|
T Consensus        53 ~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d  132 (437)
T 3gre_A           53 KLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKD  132 (437)
T ss_dssp             CEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETT
T ss_pred             eEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCC
Confidence            456778 89999999999999 887 89999999999998643                     5667788999999999


Q ss_pred             CeEEEEECC---CCeEEEEEcc------------cCCcEEEEE--EcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeC--
Q psy7057          59 MTAKLWCLE---SQQCKLTIRQ------------HEMAVWGVI--QLANG-IIVTGCADKTIKLHS-EEGEFLKTLTG--  117 (557)
Q Consensus        59 g~i~iwd~~---~~~~~~~l~~------------h~~~V~~l~--~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~--  117 (557)
                      ++|++||+.   +++....+..            +...+.++.  +++++ .+++|+.|+.|++|| .+++++..+.+  
T Consensus       133 g~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~  212 (437)
T 3gre_A          133 GQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSP  212 (437)
T ss_dssp             SEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCG
T ss_pred             CEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCC
Confidence            999999994   5544443332            455666666  44666 999999999999999 57788889988  


Q ss_pred             CCCCEEEEEEeCCCe-EEEEECCCeEEEEECCCCeEEEEEe-CCCCcEEEEEEc------CCEEEEEeCCCeEEEEECCC
Q psy7057         118 HTDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHTMY-GHPNFIYSVAAH------GDLITSGGEDQCVCVYQNKA  189 (557)
Q Consensus       118 h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~-~h~~~V~~l~~~------~~~l~s~s~Dg~I~iwd~~~  189 (557)
                      |...|++++|+|++. |++|+.|++|++||+++++++.++. .|...|.++++.      +.+|++++.|+.|++||+++
T Consensus       213 h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~  292 (437)
T 3gre_A          213 RHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVK  292 (437)
T ss_dssp             GGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTT
T ss_pred             CCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCC
Confidence            889999999999976 7799999999999999999999986 788899999763      34899999999999999875


Q ss_pred             C---ceEee--------------------------CCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHH----
Q psy7057         190 Q---NSFMI--------------------------PAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAV----  235 (557)
Q Consensus       190 ~---~~~~~--------------------------~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~----  235 (557)
                      .   ..+..                          |...|++++|+ ++. |++|+.|+.|++||+.+++......    
T Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~  371 (437)
T 3gre_A          293 GHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKAVISPSR  371 (437)
T ss_dssp             TEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEECC--
T ss_pred             CcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceEEecccc
Confidence            5   22322                          45568899999 556 8999999999999998765432111    


Q ss_pred             -------------------------------HhcccceeEEEeccCC-CceeEEEEeCCCcEEEEe
Q psy7057         236 -------------------------------QAQYAEEVKKLKSANE-QEIGGVKVSDDGIVRVFS  269 (557)
Q Consensus       236 -------------------------------~~~~~~~v~~l~~~~~-~~~~~vs~s~DG~IrvW~  269 (557)
                                                     ...|...|..+.+.+. ....+++++.||.|+||+
T Consensus       372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~  437 (437)
T 3gre_A          372 FSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ  437 (437)
T ss_dssp             CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred             cCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence                                           1126677888877766 455789999999999995

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.4e-31  Score=269.69  Aligned_cols=226  Identities=23%  Similarity=0.392  Sum_probs=187.9

Q ss_pred             cEEEEEe-cc-CcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC-----------------------CCCCCCCCEEEEE
Q psy7057           2 YKLSTAL-YG-HSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND-----------------------LSPGAKVNTLLSA   55 (557)
Q Consensus         2 ~kl~~~l-~g-H~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~-----------------------~~~~~~~~~l~sg   55 (557)
                      +++...+ .+ |.+.|++++|+|++. |++|+.|++|+||++..                       ++++|++.+|++|
T Consensus        46 ~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~  125 (330)
T 2hes_X           46 FTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATC  125 (330)
T ss_dssp             CEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEE
T ss_pred             eEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEE
Confidence            3556666 45 999999999999998 88999999999998731                       6778889999999


Q ss_pred             ECCCeEEEEECCC----CeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeC-CC--cEEEEEeCCCCCEEEEEE
Q psy7057          56 SWDMTAKLWCLES----QQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSE-EG--EFLKTLTGHTDCVRGLAV  127 (557)
Q Consensus        56 s~Dg~i~iwd~~~----~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~-~~--~~~~~l~~h~~~V~~l~~  127 (557)
                      +.|++|++||+..    .+++..+.+|...|.+++|+|++ .|++|+.|++|++||. .+  .++..+.+|...|.+++|
T Consensus       126 s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~  205 (330)
T 2hes_X          126 SRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDF  205 (330)
T ss_dssp             ETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEE
T ss_pred             eCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEe
Confidence            9999999999943    35778899999999999999988 9999999999999994 33  578889999999999999


Q ss_pred             eCC--Ce-EEEEECCCeEEEEECCCC--------eEEEEEeC-CCCcEEEEEE-cCCEEEEEeCCCeEEEEECCCC--c-
Q psy7057         128 LND--TD-FVSCSNDASIRVWDSTTG--------KCVHTMYG-HPNFIYSVAA-HGDLITSGGEDQCVCVYQNKAQ--N-  191 (557)
Q Consensus       128 ~~~--~~-lvs~s~Dg~I~vwd~~~~--------~~~~~~~~-h~~~V~~l~~-~~~~l~s~s~Dg~I~iwd~~~~--~-  191 (557)
                      +|+  +. |++++.|++|++||++.+        .+...+.+ |...|++++| .+..|++++.|++|++|+....  . 
T Consensus       206 ~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~~~~~~~~  285 (330)
T 2hes_X          206 DKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYEEVDGEWKV  285 (330)
T ss_dssp             CCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETTSCEEEEEEETTEEEE
T ss_pred             cCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCCEEEEEeCCCEEEEEEcCCCceEE
Confidence            998  43 789999999999998654        45555655 8999999999 4568999999999999996543  1 


Q ss_pred             ---eEeeCCc-cEEEEEEcC--CCc-EEEEEcCCcEEEEecCC
Q psy7057         192 ---SFMIPAM-SVWAVAILP--NSD-IVTGSSDGIVRVFSANP  227 (557)
Q Consensus       192 ---~~~~~~~-~v~~v~~~p--~g~-l~sg~~Dg~I~iwd~~~  227 (557)
                         ....|.. .|.+++|+|  ++. |++|+.||+|+||++..
T Consensus       286 ~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~  328 (330)
T 2hes_X          286 FAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK  328 (330)
T ss_dssp             EEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred             EeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence               1234665 899999999  566 99999999999999864

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=100.00  E-value=1.4e-32  Score=283.54  Aligned_cols=263  Identities=13%  Similarity=0.120  Sum_probs=205.2

Q ss_pred             EeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC------------------CCCCCCCCEEEEEECCCeEEEEECC
Q psy7057           7 ALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND------------------LSPGAKVNTLLSASWDMTAKLWCLE   67 (557)
Q Consensus         7 ~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~------------------~~~~~~~~~l~sgs~Dg~i~iwd~~   67 (557)
                      .++.|.++|++++|+|+++ |++|+.|++|++||+.+                  +.+++++++|++++.|++|++||+.
T Consensus         6 ~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~   85 (377)
T 3dwl_C            6 VLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKR   85 (377)
T ss_dssp             EEEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC---
T ss_pred             eEecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcC
Confidence            4555788999999999998 88999999999999864                  5677889999999999999999999


Q ss_pred             CCe---EEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCc----EEEEEeC-CCCCEEEEEEeCCCe-EEEEE
Q psy7057          68 SQQ---CKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGE----FLKTLTG-HTDCVRGLAVLNDTD-FVSCS  137 (557)
Q Consensus        68 ~~~---~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~----~~~~l~~-h~~~V~~l~~~~~~~-lvs~s  137 (557)
                      +++   +...+.+|...|.+++|+|++ .|++++.|+.|++||....    ....+.+ |...|.+++|+|++. |++++
T Consensus        86 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~  165 (377)
T 3dwl_C           86 PDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGC  165 (377)
T ss_dssp             ---CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEE
T ss_pred             CCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEe
Confidence            876   677888899999999999988 8999999999999995443    3677777 999999999999976 77999


Q ss_pred             CCCeEEEEECC------------------CCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC-------
Q psy7057         138 NDASIRVWDST------------------TGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ-------  190 (557)
Q Consensus       138 ~Dg~I~vwd~~------------------~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~-------  190 (557)
                      .|++|++||++                  .++++..+ +|...|.+++|  ++++|++++.|++|++||+...       
T Consensus       166 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~  244 (377)
T 3dwl_C          166 ADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRAL  244 (377)
T ss_dssp             SSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEEC
T ss_pred             CCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceee
Confidence            99999999985                  35567777 89999999999  6779999999999999996544       


Q ss_pred             ceEeeCCccEEEEEEcCCCcEEEEEcCCcEEEEecCCCCcc-----h--------------------h---------H--
Q psy7057         191 NSFMIPAMSVWAVAILPNSDIVTGSSDGIVRVFSANPDRQA-----E--------------------D---------A--  234 (557)
Q Consensus       191 ~~~~~~~~~v~~v~~~p~g~l~sg~~Dg~I~iwd~~~~~~~-----~--------------------~---------~--  234 (557)
                      ..+..|...|.+++|+|++++++++.++.+.+|+.......     .                    .         .  
T Consensus       245 ~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  324 (377)
T 3dwl_C          245 ITVKLSQLPLRSLLWANESAIVAAGYNYSPILLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTF  324 (377)
T ss_dssp             CCEECSSSCEEEEEEEETTEEEEEESSSSEEEECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC-------------
T ss_pred             EeecCCCCceEEEEEcCCCCEEEEEcCCcEEEEEeCCCceEEEeeecccccccccccccccccccccccccccccccccc
Confidence            45677888999999999999555555555667876522100     0                    0         0  


Q ss_pred             --------------HHhcccceeEEEeccCCCce---eEEEEeCCCcEEEEec
Q psy7057         235 --------------VQAQYAEEVKKLKSANEQEI---GGVKVSDDGIVRVFSA  270 (557)
Q Consensus       235 --------------~~~~~~~~v~~l~~~~~~~~---~~vs~s~DG~IrvW~~  270 (557)
                                    ....|...+..+...+....   .++|++.||.|+||++
T Consensus       325 ~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl  377 (377)
T 3dwl_C          325 RNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL  377 (377)
T ss_dssp             ------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred             cchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence                          00116667777765444332   5899999999999985

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=100.00  E-value=2e-30  Score=266.85  Aligned_cols=222  Identities=23%  Similarity=0.264  Sum_probs=199.0

Q ss_pred             EEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------------CCCCCCCCEEEEEECCC
Q psy7057           3 KLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------------LSPGAKVNTLLSASWDM   59 (557)
Q Consensus         3 kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------------~~~~~~~~~l~sgs~Dg   59 (557)
                      +..+.+..|...|.+++|+|+|. |++|+.|+.+++|++..                      +.+.+++..|++++.|+
T Consensus        97 ~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~  176 (354)
T 2pbi_B           97 NKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDG  176 (354)
T ss_dssp             CEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTS
T ss_pred             CcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCC
Confidence            45567888999999999999998 88999999999998742                      45677888999999999


Q ss_pred             eEEEEECCCCeEEEEEcccCCcEEEEEEcC--CC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe-EE
Q psy7057          60 TAKLWCLESQQCKLTIRQHEMAVWGVIQLA--NG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD-FV  134 (557)
Q Consensus        60 ~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~--~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~-lv  134 (557)
                      +|++||+++++++.++.+|...|.+++++|  ++ .|++|+.|++|++|| .+++++..+.+|...|.+++|+|++. |+
T Consensus       177 ~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~  256 (354)
T 2pbi_B          177 TCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFA  256 (354)
T ss_dssp             EEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred             cEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEE
Confidence            999999999999999999999999999987  34 999999999999999 57788999999999999999999976 77


Q ss_pred             EEECCCeEEEEECCCCeEEEEEeCC--CCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC---ceEeeCCccEEEEEEcC
Q psy7057         135 SCSNDASIRVWDSTTGKCVHTMYGH--PNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVAILP  207 (557)
Q Consensus       135 s~s~Dg~I~vwd~~~~~~~~~~~~h--~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p  207 (557)
                      +++.|++|++||+++++.+..+..+  ...+.+++|  ++.+|++++.|++|++||+.+.   ..+..|...|++++|+|
T Consensus       257 s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~sp  336 (354)
T 2pbi_B          257 SGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSP  336 (354)
T ss_dssp             EEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECT
T ss_pred             EEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECC
Confidence            9999999999999999888777644  347889998  6789999999999999997655   56678999999999999


Q ss_pred             CCc-EEEEEcCCcEEEEe
Q psy7057         208 NSD-IVTGSSDGIVRVFS  224 (557)
Q Consensus       208 ~g~-l~sg~~Dg~I~iwd  224 (557)
                      ++. |++|+.|++|+||+
T Consensus       337 dg~~l~sgs~D~~v~vW~  354 (354)
T 2pbi_B          337 DGTAFCSGSWDHTLRVWA  354 (354)
T ss_dssp             TSSCEEEEETTSEEEEEC
T ss_pred             CCCEEEEEcCCCCEEecC
Confidence            998 99999999999995

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=100.00  E-value=4.1e-32  Score=274.74  Aligned_cols=221  Identities=21%  Similarity=0.268  Sum_probs=184.9

Q ss_pred             EEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC------------------CCCCC--CCCEEEEEECCCeEEEE
Q psy7057           6 TALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND------------------LSPGA--KVNTLLSASWDMTAKLW   64 (557)
Q Consensus         6 ~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~------------------~~~~~--~~~~l~sgs~Dg~i~iw   64 (557)
                      ..+.+|.+.|++++|+|+|+ |++|+.|++|+|||+.+                  +++.+  ++++|++|+.|++|++|
T Consensus         7 ~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iW   86 (316)
T 3bg1_A            7 TVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIW   86 (316)
T ss_dssp             -------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEE
T ss_pred             eecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEE
Confidence            34679999999999999998 89999999999999753                  34443  47899999999999999


Q ss_pred             ECCCC--eEEEEEcccCCcEEEEEEcCC--C-EEEEEECCCeEEEEeCCCc----EEEEEeCCCCCEEEEEEeCC-----
Q psy7057          65 CLESQ--QCKLTIRQHEMAVWGVIQLAN--G-IIVTGCADKTIKLHSEEGE----FLKTLTGHTDCVRGLAVLND-----  130 (557)
Q Consensus        65 d~~~~--~~~~~l~~h~~~V~~l~~~~~--~-~l~sgs~dg~I~vwd~~~~----~~~~l~~h~~~V~~l~~~~~-----  130 (557)
                      |++++  +....+.+|...|.+++|+|+  + .|++|+.|++|++||....    ....+.+|...|.+++|+|+     
T Consensus        87 d~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~  166 (316)
T 3bg1_A           87 REENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGS  166 (316)
T ss_dssp             CCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC--
T ss_pred             ECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCcc
Confidence            99887  467788999999999999997  5 8999999999999995432    23455689999999999987     


Q ss_pred             -------------CeEEEEECCCeEEEEECCCC---eEEEEEeCCCCcEEEEEEc--C----CEEEEEeCCCeEEEEECC
Q psy7057         131 -------------TDFVSCSNDASIRVWDSTTG---KCVHTMYGHPNFIYSVAAH--G----DLITSGGEDQCVCVYQNK  188 (557)
Q Consensus       131 -------------~~lvs~s~Dg~I~vwd~~~~---~~~~~~~~h~~~V~~l~~~--~----~~l~s~s~Dg~I~iwd~~  188 (557)
                                   ..|++|+.|++|++||++..   +++.++.+|...|++++|+  +    .+|++++.|++|++|++.
T Consensus       167 ~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~  246 (316)
T 3bg1_A          167 LIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCD  246 (316)
T ss_dssp             ----CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECS
T ss_pred             ccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEcc
Confidence                         24889999999999998755   5777889999999999993  2    689999999999999975


Q ss_pred             CC-------ceEeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecC
Q psy7057         189 AQ-------NSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSAN  226 (557)
Q Consensus       189 ~~-------~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~  226 (557)
                      ..       ..+..|...|++++|+|++. |++++.|++|++|+..
T Consensus       247 ~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~  292 (316)
T 3bg1_A          247 DASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES  292 (316)
T ss_dssp             STTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred             CccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence            41       45667888999999999998 9999999999999975

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=100.00  E-value=7.2e-31  Score=273.40  Aligned_cols=260  Identities=18%  Similarity=0.205  Sum_probs=222.7

Q ss_pred             CcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC---------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEE
Q psy7057          11 HSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND---------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLT   74 (557)
Q Consensus        11 H~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~---------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~   74 (557)
                      |.+.|++++|+|++. |++++.||.|++|+...               +.+++++.+|++++.|+.|++||+.+++.+..
T Consensus       107 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~  186 (425)
T 1r5m_A          107 TTNQVTCLAWSHDGNSIVTGVENGELRLWNKTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQH  186 (425)
T ss_dssp             -CBCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEE
T ss_pred             CCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEE
Confidence            788999999999998 88999999999999544               67788899999999999999999999999999


Q ss_pred             EcccCCc---------------EEEEEEcCCCEEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEE
Q psy7057          75 IRQHEMA---------------VWGVIQLANGIIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCS  137 (557)
Q Consensus        75 l~~h~~~---------------V~~l~~~~~~~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s  137 (557)
                      +..+...               +.+++|++++.+++++.++.|++|| ..+..+..+..|...|.+++|+|++. |++++
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~  266 (425)
T 1r5m_A          187 FELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSAS  266 (425)
T ss_dssp             ECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEE
T ss_pred             eeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEc
Confidence            9888777               9999999999999999999999999 45677788889999999999999975 77999


Q ss_pred             CCCeEEEEECCCCeEEEEEeCCCCcEEEEEEcCC-EEEEEeCCCeEEEEECCCC---ceEeeCCccEEEEEEcCCCc-EE
Q psy7057         138 NDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGD-LITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVAILPNSD-IV  212 (557)
Q Consensus       138 ~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~~~~-~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p~g~-l~  212 (557)
                      .|+.|++||+++++++..+..|...|.++++.++ .+++++.|+.|++||+...   ..+..|...|.+++|+|++. |+
T Consensus       267 ~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~  346 (425)
T 1r5m_A          267 DDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDDKVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYA  346 (425)
T ss_dssp             TTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTTEEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEE
T ss_pred             CCCEEEEEECCCCccceEecCCCccEEEEEECCCCEEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEE
Confidence            9999999999999999999999999999999322 9999999999999998766   55667788999999999998 88


Q ss_pred             EEEcCCcEEEEecCCCCcc------------------hhHHHhcccc--eeEEEeccCCCceeEEEEeCCCcEEEEecC
Q psy7057         213 TGSSDGIVRVFSANPDRQA------------------EDAVQAQYAE--EVKKLKSANEQEIGGVKVSDDGIVRVFSAN  271 (557)
Q Consensus       213 sg~~Dg~I~iwd~~~~~~~------------------~~~~~~~~~~--~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~  271 (557)
                      +++.||.|++|++......                  .......+..  .+..+.+.+... .+++++.||.|++|++.
T Consensus       347 ~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~iw~~~  424 (425)
T 1r5m_A          347 VAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGN-KISVAYSLQEGSVVAIP  424 (425)
T ss_dssp             EEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSS-EEEEEESSSCCEEEECC
T ss_pred             EEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCc-eEEEEecCceEEEEeec
Confidence            9999999999999765410                  1122233433  788888877766 57899999999999975

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=100.00  E-value=1.3e-30  Score=267.11  Aligned_cols=224  Identities=27%  Similarity=0.414  Sum_probs=189.9

Q ss_pred             eccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC------------------CCCCCCCCEEEEEECCCeEEEEECCC
Q psy7057           8 LYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND------------------LSPGAKVNTLLSASWDMTAKLWCLES   68 (557)
Q Consensus         8 l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~------------------~~~~~~~~~l~sgs~Dg~i~iwd~~~   68 (557)
                      +.+|.+.|++++|+|+++ |++|+.|++|++|++..                  ++++|++++|++|+.|++|++||+.+
T Consensus        57 ~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~  136 (345)
T 3fm0_A           57 SEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDE  136 (345)
T ss_dssp             CSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECT
T ss_pred             ccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCC
Confidence            378999999999999998 89999999999998754                  67788999999999999999999987


Q ss_pred             C---eEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCC-Cc--EEEEEeCCCCCEEEEEEeCCCe-EEEEECCC
Q psy7057          69 Q---QCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEE-GE--FLKTLTGHTDCVRGLAVLNDTD-FVSCSNDA  140 (557)
Q Consensus        69 ~---~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~-~~--~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg  140 (557)
                      +   .++..+.+|...|.+++|+|++ .|++|+.|++|++|+.. +.  +...+.+|...|++++|+|++. |++++.|+
T Consensus       137 ~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~  216 (345)
T 3fm0_A          137 EDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDR  216 (345)
T ss_dssp             TSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred             CCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCC
Confidence            5   4567788999999999999988 99999999999999943 32  4578899999999999999976 77999999


Q ss_pred             eEEEEECCC---------------CeEEEEEeC-CCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC-------c----
Q psy7057         141 SIRVWDSTT---------------GKCVHTMYG-HPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ-------N----  191 (557)
Q Consensus       141 ~I~vwd~~~---------------~~~~~~~~~-h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~-------~----  191 (557)
                      +|++||...               .+++.++.+ |...|++++|  ++..|++++.|+.|++|+....       .    
T Consensus       217 ~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~  296 (345)
T 3fm0_A          217 TVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTA  296 (345)
T ss_dssp             CEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEE
T ss_pred             eEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEe
Confidence            999999632               245666666 8899999999  6678999999999999995432       1    


Q ss_pred             -eEeeCCccEEEEEEcCCCc--EEEEEcCCcEEEEecCCCCcc
Q psy7057         192 -SFMIPAMSVWAVAILPNSD--IVTGSSDGIVRVFSANPDRQA  231 (557)
Q Consensus       192 -~~~~~~~~v~~v~~~p~g~--l~sg~~Dg~I~iwd~~~~~~~  231 (557)
                       ....|...|++++|+|++.  |++|+.||+|++|++...+..
T Consensus       297 ~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~~  339 (345)
T 3fm0_A          297 HLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGL  339 (345)
T ss_dssp             EETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC----
T ss_pred             eecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCCc
Confidence             1135788999999999874  889999999999999876644

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=99.98  E-value=5.4e-32  Score=286.17  Aligned_cols=271  Identities=16%  Similarity=0.175  Sum_probs=204.8

Q ss_pred             cEEEEEeccCcccEEEEEEcCC-Cc-EEEEECCCcEEEEcCCC------------------CCCCC-CCCEEEEEECCCe
Q psy7057           2 YKLSTALYGHSMDVRSLSVTPD-GC-ILSASRDKSAKLWKPND------------------LSPGA-KVNTLLSASWDMT   60 (557)
Q Consensus         2 ~kl~~~l~gH~~~V~~l~~spd-g~-l~sgs~Dg~V~iWd~~~------------------~~~~~-~~~~l~sgs~Dg~   60 (557)
                      |++.+...+|...|+||+|+|. +. |++|+.||+|+|||+..                  +.++| ++.+|++|+.|++
T Consensus       109 ~~~~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~  188 (435)
T 4e54_B          109 YRILQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGT  188 (435)
T ss_dssp             TTSCCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSC
T ss_pred             eeecccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCE
Confidence            3445667789999999999995 44 88999999999999865                  56665 5789999999999


Q ss_pred             EEEEECCCCeEEEEEccc--CCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcEEEEEeCCCCCEEEEEEeCCCe--EEE
Q psy7057          61 AKLWCLESQQCKLTIRQH--EMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTD--FVS  135 (557)
Q Consensus        61 i~iwd~~~~~~~~~l~~h--~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~~~--lvs  135 (557)
                      |++||++++........|  ...+.+++|+|++ +|++|+.|+.|++||.+++.+..+.+|...|++++|+|++.  |++
T Consensus       189 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s  268 (435)
T 4e54_B          189 TRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLAT  268 (435)
T ss_dssp             EEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCSSEEEE
T ss_pred             EEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcceeEEEecccceEEeeeecCCCceEEEE
Confidence            999999876554444333  4467899999988 99999999999999998888889999999999999999864  669


Q ss_pred             EECCCeEEEEECCCCeEEEE---EeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC---ceEeeCCc------cEE
Q psy7057         136 CSNDASIRVWDSTTGKCVHT---MYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ---NSFMIPAM------SVW  201 (557)
Q Consensus       136 ~s~Dg~I~vwd~~~~~~~~~---~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~------~v~  201 (557)
                      ++.|++|++||+++.+....   ..+|...|.+++|  ++.+|++++.|++|++||+...   ..+..|..      .+.
T Consensus       269 ~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  348 (435)
T 4e54_B          269 ASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPI  348 (435)
T ss_dssp             EETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCC
T ss_pred             ecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeE
Confidence            99999999999987664333   3579999999999  6789999999999999997765   22322221      233


Q ss_pred             EEEEcCCCc-EEEEE------------cCCcEEEEecCCCCcchhHHHhcccceeEEEe-ccCCCceeEEEEeCCCcEEE
Q psy7057         202 AVAILPNSD-IVTGS------------SDGIVRVFSANPDRQAEDAVQAQYAEEVKKLK-SANEQEIGGVKVSDDGIVRV  267 (557)
Q Consensus       202 ~v~~~p~g~-l~sg~------------~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~-~~~~~~~~~vs~s~DG~Irv  267 (557)
                      .+.++|++. +++++            .++.|++|+..+++..... ...+...+..+. +.+. ...+++| .|+.|+|
T Consensus       349 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l-~~~~~~~v~s~~~fspd-g~~lasg-~d~~i~i  425 (435)
T 4e54_B          349 KAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQL-YDPESSGISSLNEFNPM-GDTLASA-MGYHILI  425 (435)
T ss_dssp             BCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEE-CCSSCCCCCCEEEECTT-SSCEEEE-CSSEEEE
T ss_pred             EEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEE-eCCCCCcEEEEEEECCC-CCEEEEE-cCCcEEE
Confidence            455666655 44433            3468999999887654322 223455566654 4444 4445665 4889999


Q ss_pred             EecCCChh
Q psy7057         268 FSANPDRQ  275 (557)
Q Consensus       268 W~~~~~~~  275 (557)
                      |++.+++.
T Consensus       426 W~~~~gk~  433 (435)
T 4e54_B          426 WSQQEART  433 (435)
T ss_dssp             CCCC----
T ss_pred             EECCcCee
Confidence            99987754

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=99.98  E-value=4.7e-30  Score=259.99  Aligned_cols=221  Identities=24%  Similarity=0.358  Sum_probs=191.7

Q ss_pred             EEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEEC
Q psy7057           4 LSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCL   66 (557)
Q Consensus         4 l~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~   66 (557)
                      ..+.|.+|...|++++|+|+++ |++|+.|++|++||+.+                +.+++++.+|++|+.|++|++||+
T Consensus        57 ~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~  136 (319)
T 3frx_A           57 PVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTI  136 (319)
T ss_dssp             EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEET
T ss_pred             cceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence            3567899999999999999998 88999999999999976                567788999999999999999998


Q ss_pred             CCCeEEEEEcccCCcEEEEEEcCC------C-EEEEEECCCeEEEEeC-CCcEEEEEeCCCCCEEEEEEeCCCe-EEEEE
Q psy7057          67 ESQQCKLTIRQHEMAVWGVIQLAN------G-IIVTGCADKTIKLHSE-EGEFLKTLTGHTDCVRGLAVLNDTD-FVSCS  137 (557)
Q Consensus        67 ~~~~~~~~l~~h~~~V~~l~~~~~------~-~l~sgs~dg~I~vwd~-~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s  137 (557)
                      + ++++.++.+|...|.++.+.|.      + .+++++.|++|++||. +......+.+|...|.+++|+|++. |++++
T Consensus       137 ~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~  215 (319)
T 3frx_A          137 K-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAG  215 (319)
T ss_dssp             T-SCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEE
T ss_pred             C-CCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEe
Confidence            6 5678889999999999999984      3 7999999999999994 5667788999999999999999977 77999


Q ss_pred             CCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCCce---E--------eeCCccEEEEE
Q psy7057         138 NDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQNS---F--------MIPAMSVWAVA  204 (557)
Q Consensus       138 ~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~~~---~--------~~~~~~v~~v~  204 (557)
                      .|++|++||+++++++.++.. ...|.+++|  ++.+|++++. ..+++|++.....   +        ..+...+.+++
T Consensus       216 ~dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~sp~~~~la~~~~-~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  293 (319)
T 3frx_A          216 KDGEIMLWNLAAKKAMYTLSA-QDEVFSLAFSPNRYWLAAATA-TGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLA  293 (319)
T ss_dssp             TTCEEEEEETTTTEEEEEEEC-CSCEEEEEECSSSSEEEEEET-TEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEE
T ss_pred             CCCeEEEEECCCCcEEEEecC-CCcEEEEEEcCCCCEEEEEcC-CCcEEEEeCcCeeeeccCccccccccCcCcceeEEE
Confidence            999999999999999999875 468999999  5667777665 5599999765422   1        12345789999


Q ss_pred             EcCCCc-EEEEEcCCcEEEEecCC
Q psy7057         205 ILPNSD-IVTGSSDGIVRVFSANP  227 (557)
Q Consensus       205 ~~p~g~-l~sg~~Dg~I~iwd~~~  227 (557)
                      |+|+|+ |++|+.|+.|+||++.+
T Consensus       294 ~spdg~~l~sg~~Dg~i~vWd~~t  317 (319)
T 3frx_A          294 WSADGQTLFAGYTDNVIRVWQVMT  317 (319)
T ss_dssp             ECTTSSEEEEEETTSCEEEEEEEE
T ss_pred             ECCCCCEEEEeecCceEEEEEEee
Confidence            999999 88999999999999865

>2k89_A PLA2P, PLAP, phospholipase A-2-activating protein; ubiquitin binding, WD repeat, protein binding; NMR {Homo sapiens} PDB: 2k8a_A 2k8b_B 2k8c_B

Probab=99.98  E-value=2.1e-34  Score=219.13  Aligned_cols=66  Identities=48%  Similarity=0.911  Sum_probs=58.9

Q ss_pred             CCCCCCCCccceeeeeeeccCCCCCCCCCccCCCcccccccccccCCCceecccCCCCCcccccccCCChHHHHHhhhhc
Q psy7057         425 SKSKQGPTEYDFVFSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHLTSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHT  504 (557)
Q Consensus       425 ~~~~~~g~~yd~vf~vd~~~g~p~~klp~n~~~~p~~~a~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  504 (557)
                      .|..|+||||||||||||+||.||||||||++||||+||||||                                   ++
T Consensus         7 ~k~~~~GkeYDyVFdVdi~dG~~~lkLpyN~~dnP~~aAqkFi-----------------------------------~~   51 (80)
T 2k89_A            7 GKVLYEGKEFDYVFSIDVNEGGPSYKLPYNTSDDPWLTAYNFL-----------------------------------QK   51 (80)
T ss_dssp             SCEEETTEEESEEEEECCSSSCSCEEEEECTTSCHHHHHHHHH-----------------------------------HH
T ss_pred             CceeecCccccEEEEEEcCCCCcccccCccCCCCHHHHHHHHH-----------------------------------HH
Confidence            4557999999999999999999999999998888887777655                                   55


Q ss_pred             CCCChHHHHHHHHHHHhcccC
Q psy7057         505 HHLSQMFLEQVANFIMTNSKS  525 (557)
Q Consensus       505 ~~l~~~~~~~v~~fi~~n~~~  525 (557)
                      |+||++||||||+||++||++
T Consensus        52 n~Lp~~yldqI~~FI~~N~~~   72 (80)
T 2k89_A           52 NDLNPMFLDQVAKFIIDNTKG   72 (80)
T ss_dssp             HTCCTTHHHHHHHHHHHHHST
T ss_pred             cCCCHHHHHHHHHHHHHhCCC
Confidence            799999999999999999974

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=99.98  E-value=7e-31  Score=272.75  Aligned_cols=227  Identities=19%  Similarity=0.296  Sum_probs=197.7

Q ss_pred             EEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC-----------------------CCCCCC-CCEEEEEEC
Q psy7057           3 KLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND-----------------------LSPGAK-VNTLLSASW   57 (557)
Q Consensus         3 kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~-----------------------~~~~~~-~~~l~sgs~   57 (557)
                      +....+.+|...|.+++|+|+++ |++|+.|+.|++|++..                       +.+.+. +..|++|+.
T Consensus        99 ~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~  178 (380)
T 3iz6_a           99 QKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSG  178 (380)
T ss_dssp             EEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECT
T ss_pred             ccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECC
Confidence            45678999999999999999998 88999999999999753                       233343 457999999


Q ss_pred             CCeEEEEECCCCeEEEEE-----cccCCcEEEEEEcC-CC-EEEEEECCCeEEEEeC--CCcEEEEEeCCCCCEEEEEEe
Q psy7057          58 DMTAKLWCLESQQCKLTI-----RQHEMAVWGVIQLA-NG-IIVTGCADKTIKLHSE--EGEFLKTLTGHTDCVRGLAVL  128 (557)
Q Consensus        58 Dg~i~iwd~~~~~~~~~l-----~~h~~~V~~l~~~~-~~-~l~sgs~dg~I~vwd~--~~~~~~~l~~h~~~V~~l~~~  128 (557)
                      |++|++||+.+++++..+     .+|...|.++++++ ++ .|++|+.|++|++||.  .+.++..+.+|...|.+++|+
T Consensus       179 D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~  258 (380)
T 3iz6_a          179 DQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFF  258 (380)
T ss_dssp             TSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEEC
T ss_pred             CCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEe
Confidence            999999999999998887     67999999999987 44 9999999999999995  457788999999999999999


Q ss_pred             CCCe-EEEEECCCeEEEEECCCCeEEEEEeCCCC-------cEEEEEE--cCCEEEEEeCCCeEEEEECCCC---ceE--
Q psy7057         129 NDTD-FVSCSNDASIRVWDSTTGKCVHTMYGHPN-------FIYSVAA--HGDLITSGGEDQCVCVYQNKAQ---NSF--  193 (557)
Q Consensus       129 ~~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~-------~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~---~~~--  193 (557)
                      |++. |++|+.|++|++||+++++++..+..+..       .|.+++|  ++.+|++|+.||.|++||....   ..+  
T Consensus       259 p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~  338 (380)
T 3iz6_a          259 PDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGT  338 (380)
T ss_dssp             TTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECC
T ss_pred             cCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEec
Confidence            9976 77999999999999999999988875532       4788998  7889999999999999997655   223  


Q ss_pred             --eeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCC
Q psy7057         194 --MIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDR  229 (557)
Q Consensus       194 --~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~  229 (557)
                        ..|...|++++|+|++. |++|+.|++|+||++...+
T Consensus       339 ~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~  377 (380)
T 3iz6_a          339 LQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHR  377 (380)
T ss_dssp             SCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSSS
T ss_pred             ccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCCc
Confidence              46888999999999998 8999999999999998654

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=99.98  E-value=1.1e-29  Score=269.67  Aligned_cols=264  Identities=20%  Similarity=0.308  Sum_probs=221.7

Q ss_pred             cEEEEEeccCcccEEEEEEcCCCcEEEEECCCcEEEEcCCC----------------C--CCCCCCCEEEEEECCCeEEE
Q psy7057           2 YKLSTALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPND----------------L--SPGAKVNTLLSASWDMTAKL   63 (557)
Q Consensus         2 ~kl~~~l~gH~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~----------------~--~~~~~~~~l~sgs~Dg~i~i   63 (557)
                      .++...+.+|.+.|++++|+|++.|++|+.||+|++||+.+                +  .+.+++.++++|+.|++|++
T Consensus       152 ~~~~~~~~~h~~~V~~l~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~v  231 (464)
T 3v7d_B          152 KKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHV  231 (464)
T ss_dssp             TEEEEEECCCSSCEEEEEECSTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEE
T ss_pred             CcEEEEEeCCCcCEEEEEEcCCCEEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEE
Confidence            35678899999999999999999899999999999999886                2  23356789999999999999


Q ss_pred             EECCCCe-----------------------EEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCC
Q psy7057          64 WCLESQQ-----------------------CKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGH  118 (557)
Q Consensus        64 wd~~~~~-----------------------~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h  118 (557)
                      ||+.++.                       ....+.+|...|.++.  +++ .+++|+.|+.|++|| .+++++..+.+|
T Consensus       232 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~  309 (464)
T 3v7d_B          232 WKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVS--GHGNIVVSGSYDNTLIVWDVAQMKCLYILSGH  309 (464)
T ss_dssp             EECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEE--EETTEEEEEETTSCEEEEETTTTEEEEEECCC
T ss_pred             eeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEc--CCCCEEEEEeCCCeEEEEECCCCcEEEEecCC
Confidence            9998764                       3567888999998884  444 999999999999999 577888999999


Q ss_pred             CCCEEEEEEeCCCe-EEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEEcCCEEEEEeCCCeEEEEECCCC-ceE-ee
Q psy7057         119 TDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQ-NSF-MI  195 (557)
Q Consensus       119 ~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~~-~~~-~~  195 (557)
                      ...|.+++++|++. +++|+.|++|++||+++++++.++.+|...|.++++++.+|++++.|++|++||+.+. ... ..
T Consensus       310 ~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~  389 (464)
T 3v7d_B          310 TDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYH  389 (464)
T ss_dssp             SSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred             CCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEcCCEEEEEeCCCcEEEEECCCCceeeeec
Confidence            99999999999965 7799999999999999999999999999999999999999999999999999998776 222 24


Q ss_pred             CCccEEEEEEcCCCcEEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEec
Q psy7057         196 PAMSVWAVAILPNSDIVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSA  270 (557)
Q Consensus       196 ~~~~v~~v~~~p~g~l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~  270 (557)
                      +...+..++++|++.+++++.||.|++|++.+++..... ...+...+..+.+.  ....+++++.||.+.+|-+
T Consensus       390 ~~~~~~~~~~~~~~~~l~~~~dg~i~iwd~~~g~~~~~~-~~~~~~~v~~v~~~--~~~l~~~~~~~g~~~i~~l  461 (464)
T 3v7d_B          390 HTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHAN-ILKDADQIWSVNFK--GKTLVAAVEKDGQSFLEIL  461 (464)
T ss_dssp             CTTCCCEEEEEECSSEEEEEETTEEEEEETTTCCEEESC-TTTTCSEEEEEEEE--TTEEEEEEEETTEEEEEEE
T ss_pred             CCCCccEEEEEeCCCEEEEecCCeEEEEECCCCcEEehh-hccCCCcEEEEEec--CCEEEEEEEeCCeEEEEEe
Confidence            566788899999999444444999999999988766432 23356778888875  4555677788887776654

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=99.98  E-value=9.1e-30  Score=265.55  Aligned_cols=213  Identities=31%  Similarity=0.501  Sum_probs=186.7

Q ss_pred             cEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEc
Q psy7057          14 DVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIR   76 (557)
Q Consensus        14 ~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~   76 (557)
                      .|++++|+|+|+ |++|+.|++|++||+.+                +.+++++.+|++++.|++|++||+.++++...+.
T Consensus       125 ~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~  204 (393)
T 1erj_A          125 YIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS  204 (393)
T ss_dssp             BEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred             eEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE
Confidence            499999999998 88999999999999876                6678889999999999999999999999888776


Q ss_pred             ccCCcEEEEEEcC-CC-EEEEEECCCeEEEEe-CCCcEEEEE-------eCCCCCEEEEEEeCCCe-EEEEECCCeEEEE
Q psy7057          77 QHEMAVWGVIQLA-NG-IIVTGCADKTIKLHS-EEGEFLKTL-------TGHTDCVRGLAVLNDTD-FVSCSNDASIRVW  145 (557)
Q Consensus        77 ~h~~~V~~l~~~~-~~-~l~sgs~dg~I~vwd-~~~~~~~~l-------~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vw  145 (557)
                       +...+.+++++| ++ .|++|+.|++|++|| .++..+..+       .+|...|.+++|+|++. |++++.|++|++|
T Consensus       205 -~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~w  283 (393)
T 1erj_A          205 -IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLW  283 (393)
T ss_dssp             -CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred             -cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEE
Confidence             567899999999 66 999999999999999 456666665       57999999999999976 7799999999999


Q ss_pred             ECCC------------CeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC---ceEeeCCccEEEEEEcC-
Q psy7057         146 DSTT------------GKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVAILP-  207 (557)
Q Consensus       146 d~~~------------~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p-  207 (557)
                      |+++            +.+..++.+|...|.++++  ++.+|++|+.|+.|++||..+.   ..+..|...|.++++++ 
T Consensus       284 d~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~  363 (393)
T 1erj_A          284 NLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANG  363 (393)
T ss_dssp             EC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSS
T ss_pred             ECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCC
Confidence            9875            3456778899999999999  6789999999999999997765   56778999999999987 


Q ss_pred             -----CCc-EEEEEcCCcEEEEecCC
Q psy7057         208 -----NSD-IVTGSSDGIVRVFSANP  227 (557)
Q Consensus       208 -----~g~-l~sg~~Dg~I~iwd~~~  227 (557)
                           ++. |++|+.||+|+||++..
T Consensus       364 ~~~~p~~~~l~sgs~Dg~i~iW~~~~  389 (393)
T 1erj_A          364 SSLGPEYNVFATGSGDCKARIWKYKK  389 (393)
T ss_dssp             CTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred             cCcCCCCCEEEEECCCCcEEECcccc
Confidence                 456 89999999999999864

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=99.98  E-value=2.2e-30  Score=273.61  Aligned_cols=258  Identities=24%  Similarity=0.316  Sum_probs=212.3

Q ss_pred             ccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC--------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEE
Q psy7057           9 YGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND--------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKL   73 (557)
Q Consensus         9 ~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~--------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~   73 (557)
                      .+|...|.|+++  ++. |++|+.||+|++||+.+              .+...+++.|++|+.||+|++||+.+++++.
T Consensus       130 ~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~sg~~dg~i~vwd~~~~~~~~  207 (435)
T 1p22_A          130 SETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLN  207 (435)
T ss_dssp             CSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEESSSCCEEE
T ss_pred             cCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEECCCEEEEEcCCCeEEEEECCCCcEEE
Confidence            457788999887  565 99999999999999876              1122368899999999999999999999999


Q ss_pred             EEcccCCcEEEEEEcCCCEEEEEECCCeEEEEeC-CCcE---EEEEeCCCCCEEEEEEeCCCeEEEEECCCeEEEEECCC
Q psy7057          74 TIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSE-EGEF---LKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTT  149 (557)
Q Consensus        74 ~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~-~~~~---~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~  149 (557)
                      ++.+|...|.+++|++ +.+++|+.|+.|++||. ++..   ...+.+|...|.++++. ...+++|+.|++|++||+++
T Consensus       208 ~~~~h~~~v~~l~~~~-~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~s~~~dg~i~vwd~~~  285 (435)
T 1p22_A          208 TLIHHCEAVLHLRFNN-GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD-DKYIVSASGDRTIKVWNTST  285 (435)
T ss_dssp             EECCCCSCEEEEECCT-TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEE-TTEEEEEETTSEEEEEETTT
T ss_pred             EEcCCCCcEEEEEEcC-CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeC-CCEEEEEeCCCeEEEEECCc
Confidence            9999999999999974 59999999999999994 3333   36778999999999993 35688999999999999999


Q ss_pred             CeEEEEEeCCCCcEEEEEEcCCEEEEEeCCCeEEEEECCCC---ceEeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEec
Q psy7057         150 GKCVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSA  225 (557)
Q Consensus       150 ~~~~~~~~~h~~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~  225 (557)
                      ++++.++.+|...|.++++++..+++|+.|+.|++||+++.   ..+..|...|.++++  ++. +++|+.||.|++||+
T Consensus       286 ~~~~~~~~~~~~~v~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~  363 (435)
T 1p22_A          286 CEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDL  363 (435)
T ss_dssp             CCEEEEEECCSSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEH
T ss_pred             CcEEEEEcCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEEC
Confidence            99999999999999999999999999999999999998765   566778889999999  455 999999999999998


Q ss_pred             CCCCcc-------hhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCChh
Q psy7057         226 NPDRQA-------EDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQ  275 (557)
Q Consensus       226 ~~~~~~-------~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~~~  275 (557)
                      ......       .......|...+..+.+   +...+++++.||+|++|++.....
T Consensus       364 ~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~---~~~~l~s~s~Dg~i~iwd~~~~~~  417 (435)
T 1p22_A          364 VAALDPRAPAGTLCLRTLVEHSGRVFRLQF---DEFQIVSSSHDDTILIWDFLNDPA  417 (435)
T ss_dssp             HHHTSTTSCTTTTEEEEECCCSSCCCCEEE---CSSCEEECCSSSEEEEEC------
T ss_pred             CCCCCccccccchheeeccCCCCCeEEEEe---CCCEEEEEeCCCEEEEEECCCCCC
Confidence            654311       11223456667777766   344689999999999999886543

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=99.97  E-value=8.5e-30  Score=256.23  Aligned_cols=224  Identities=24%  Similarity=0.457  Sum_probs=196.6

Q ss_pred             EEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEE
Q psy7057           3 KLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWC   65 (557)
Q Consensus         3 kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd   65 (557)
                      ++...+.+|...|.+++|+|+++ |++|+.|+.|++||+.+                +.+++++++|++|+.|++|++||
T Consensus        56 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd  135 (312)
T 4ery_A           56 KFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD  135 (312)
T ss_dssp             CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEE
T ss_pred             ccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEE
Confidence            45678899999999999999998 88999999999999876                56778899999999999999999


Q ss_pred             CCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEe-CCCCCEEEEEEeCCCe-EEEEECCCe
Q psy7057          66 LESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLT-GHTDCVRGLAVLNDTD-FVSCSNDAS  141 (557)
Q Consensus        66 ~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~-~h~~~V~~l~~~~~~~-lvs~s~Dg~  141 (557)
                      +++++++..+..|...|.+++|+|++ .+++++.|+.|++|| .+++.+..+. .+...+.+++|+|++. +++++.|+.
T Consensus       136 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~  215 (312)
T 4ery_A          136 VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT  215 (312)
T ss_dssp             TTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTE
T ss_pred             CCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCe
Confidence            99999999999999999999999988 999999999999999 4566666654 5667899999999976 779999999


Q ss_pred             EEEEECCCCeEEEEEeCCCCcEEEE--EE---cCCEEEEEeCCCeEEEEECCCC---ceEeeCCccEEEEEEcCCCc-EE
Q psy7057         142 IRVWDSTTGKCVHTMYGHPNFIYSV--AA---HGDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVAILPNSD-IV  212 (557)
Q Consensus       142 I~vwd~~~~~~~~~~~~h~~~V~~l--~~---~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p~g~-l~  212 (557)
                      |++||+++++++..+.+|...+.++  .+   ++.+|++|+.|+.|++||+.+.   ..+..|...|.+++|+|++. ++
T Consensus       216 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~  295 (312)
T 4ery_A          216 LKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIA  295 (312)
T ss_dssp             EEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEE
T ss_pred             EEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceE
Confidence            9999999999999999887654322  22   5779999999999999998765   56778999999999999998 67


Q ss_pred             EEE--cCCcEEEEecC
Q psy7057         213 TGS--SDGIVRVFSAN  226 (557)
Q Consensus       213 sg~--~Dg~I~iwd~~  226 (557)
                      +++  .|++|++|+.+
T Consensus       296 s~~~~~d~~i~~W~~d  311 (312)
T 4ery_A          296 SAALENDKTIKLWKSD  311 (312)
T ss_dssp             EEECTTTCCEEEEECC
T ss_pred             EEEccCCccEEEecCC
Confidence            776  69999999864

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=99.97  E-value=1.1e-29  Score=268.83  Aligned_cols=262  Identities=26%  Similarity=0.409  Sum_probs=221.3

Q ss_pred             EEEEEeccCcccE-EEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEE
Q psy7057           3 KLSTALYGHSMDV-RSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLW   64 (557)
Q Consensus         3 kl~~~l~gH~~~V-~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iw   64 (557)
                      +..+.|.+|.+.| .|+.+  ++. |++|+.||+|++||+.+                +.+  .++.+++|+.|++|++|
T Consensus       109 ~~~~~l~~h~~~v~~~~~~--~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~i~vw  184 (445)
T 2ovr_B          109 KSPKVLKGHDDHVITCLQF--CGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQM--RDNIIISGSTDRTLKVW  184 (445)
T ss_dssp             CCCEEEECSTTSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEE--ETTEEEEEETTSCEEEE
T ss_pred             ceeEEecccCCCcEEEEEE--cCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEe--cCCEEEEEeCCCeEEEE
Confidence            3457899999875 55555  566 99999999999999876                222  36799999999999999


Q ss_pred             ECCCCeEEEEEcccCCcEEEEEEcCCCEEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCeEEEEECCCeEE
Q psy7057          65 CLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIR  143 (557)
Q Consensus        65 d~~~~~~~~~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~I~  143 (557)
                      |+.+++++..+.+|...|.++.+. ...+++|+.|++|++|| .+++++..+.+|...|.++++ ....+++++.|+.|+
T Consensus       185 d~~~~~~~~~~~~h~~~v~~~~~~-~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~  262 (445)
T 2ovr_B          185 NAETGECIHTLYGHTSTVRCMHLH-EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY-DGRRVVSGAYDFMVK  262 (445)
T ss_dssp             ETTTTEEEEEECCCSSCEEEEEEE-TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE-CSSCEEEEETTSCEE
T ss_pred             ECCcCcEEEEECCCCCcEEEEEec-CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE-CCCEEEEEcCCCEEE
Confidence            999999999999999999999996 34799999999999999 567888999999999999999 345588999999999


Q ss_pred             EEECCCCeEEEEEeCCCCcEEEEEEcCCEEEEEeCCCeEEEEECCCC---ceEeeCCccEEEEEEcCCCcEEEEEcCCcE
Q psy7057         144 VWDSTTGKCVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVAILPNSDIVTGSSDGIV  220 (557)
Q Consensus       144 vwd~~~~~~~~~~~~h~~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p~g~l~sg~~Dg~I  220 (557)
                      +||+++++++.++.+|...|.++++++..+++++.|+.|++||+++.   ..+..|...+.++.+.++ .+++|+.||.|
T Consensus       263 iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~-~l~~~~~dg~i  341 (445)
T 2ovr_B          263 VWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN-ILVSGNADSTV  341 (445)
T ss_dssp             EEEGGGTEEEEEECCCSSCEEEEEECSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEETT-EEEEEETTSCE
T ss_pred             EEECCCCcEeEEecCCCCceEEEEECCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEeCC-EEEEEeCCCeE
Confidence            99999999999999999999999999999999999999999998766   556678888888887532 38999999999


Q ss_pred             EEEecCCCCcchhHH-HhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCCh
Q psy7057         221 RVFSANPDRQAEDAV-QAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDR  274 (557)
Q Consensus       221 ~iwd~~~~~~~~~~~-~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~~  274 (557)
                      ++||+.+++...... ...+...+..+.+.   +..+++++.||.|++|++..++
T Consensus       342 ~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~l~s~~~dg~v~iwd~~~~~  393 (445)
T 2ovr_B          342 KIWDIKTGQCLQTLQGPNKHQSAVTCLQFN---KNFVITSSDDGTVKLWDLKTGE  393 (445)
T ss_dssp             EEEETTTCCEEEEECSTTSCSSCEEEEEEC---SSEEEEEETTSEEEEEETTTCC
T ss_pred             EEEECCCCcEEEEEccCCCCCCCEEEEEEC---CCEEEEEeCCCeEEEEECCCCc
Confidence            999998776543222 22366677777774   3578999999999999987654

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=99.97  E-value=5.7e-30  Score=267.46  Aligned_cols=267  Identities=16%  Similarity=0.186  Sum_probs=221.6

Q ss_pred             eccCccc--EEEEEEcCCCcEEEEECCCcEEEEcCCC-----------------CCCCCCCCEEEEEECCCeEEEEECCC
Q psy7057           8 LYGHSMD--VRSLSVTPDGCILSASRDKSAKLWKPND-----------------LSPGAKVNTLLSASWDMTAKLWCLES   68 (557)
Q Consensus         8 l~gH~~~--V~~l~~spdg~l~sgs~Dg~V~iWd~~~-----------------~~~~~~~~~l~sgs~Dg~i~iwd~~~   68 (557)
                      ..+|...  +.+++|++ +.+++++.|+.|++|++.+                 +++++++.+|++|+.||.|++||+.+
T Consensus        87 ~~~~~~~~~~~~~~~s~-~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~  165 (401)
T 4aez_A           87 APGIIDDYYLNLLDWSN-LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVES  165 (401)
T ss_dssp             CTTCCCCTTCBCEEECT-TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred             CCCCcCCceEEEEeecC-CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcC
Confidence            3466655  44566765 3489999999999999876                 66788899999999999999999999


Q ss_pred             CeEEEEEcccCCcEEEEEEcCCCEEEEEECCCeEEEEeC--CCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEEEE
Q psy7057          69 QQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSE--EGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVW  145 (557)
Q Consensus        69 ~~~~~~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~--~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vw  145 (557)
                      ++.+..+.+|...|.+++|. ...+++|+.|+.|++||.  ....+..+.+|...|.+++|+|++. |++++.|+.|++|
T Consensus       166 ~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iw  244 (401)
T 4aez_A          166 QTKLRTMAGHQARVGCLSWN-RHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIW  244 (401)
T ss_dssp             CCEEEEECCCSSCEEEEEEE-TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred             CeEEEEecCCCCceEEEEEC-CCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEc
Confidence            99999999999999999994 349999999999999995  4667888999999999999999976 7799999999999


Q ss_pred             ECCCCeEEEEEeCCCCcEEEEEEc--C-CEEEEEe--CCCeEEEEECCCCc--eEeeCCccEEEEEEcCCCc-EEEE--E
Q psy7057         146 DSTTGKCVHTMYGHPNFIYSVAAH--G-DLITSGG--EDQCVCVYQNKAQN--SFMIPAMSVWAVAILPNSD-IVTG--S  215 (557)
Q Consensus       146 d~~~~~~~~~~~~h~~~V~~l~~~--~-~~l~s~s--~Dg~I~iwd~~~~~--~~~~~~~~v~~v~~~p~g~-l~sg--~  215 (557)
                      |+++++++..+..|...|.+++|.  + .++++++  .|+.|++||+.+..  ....+...|.+++|+|++. ++++  +
T Consensus       245 d~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~  324 (401)
T 4aez_A          245 DARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGF  324 (401)
T ss_dssp             ETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECT
T ss_pred             cCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeec
Confidence            999999999999999999999993  3 4677765  79999999987662  2234567899999999998 6664  3


Q ss_pred             cCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCChhhH
Q psy7057         216 SDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQAE  277 (557)
Q Consensus       216 ~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~~~~~  277 (557)
                      .||.|++|++.+...........+...+..+.+.+... .+++++.||.|++|++..++...
T Consensus       325 ~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~-~l~s~~~dg~i~iw~~~~~~~~~  385 (401)
T 4aez_A          325 PDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGR-ILSTAASDENLKFWRVYDGDHVK  385 (401)
T ss_dssp             TTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSS-EEEEECTTSEEEEEECCC-----
T ss_pred             CCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCC-EEEEEeCCCcEEEEECCCCcccc
Confidence            89999999998865554444556777888888877654 68999999999999998876543

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=99.97  E-value=6.6e-30  Score=290.30  Aligned_cols=270  Identities=16%  Similarity=0.210  Sum_probs=234.8

Q ss_pred             cEEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEE
Q psy7057           2 YKLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLW   64 (557)
Q Consensus         2 ~kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iw   64 (557)
                      +++.+.|.+|.+.|++++|+|++. |++++.||+|+|||+.+                +.+++++.+|++++.|+.|++|
T Consensus         3 l~~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw   82 (814)
T 3mkq_A            3 LDIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVF   82 (814)
T ss_dssp             CCCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEE
T ss_pred             cccceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEE
Confidence            567899999999999999999998 88999999999999876                6778889999999999999999


Q ss_pred             ECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCC-C-cEEEEEeCCCCCEEEEEEeC-CCe-EEEEECC
Q psy7057          65 CLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEE-G-EFLKTLTGHTDCVRGLAVLN-DTD-FVSCSND  139 (557)
Q Consensus        65 d~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~-~-~~~~~l~~h~~~V~~l~~~~-~~~-lvs~s~D  139 (557)
                      ++.+++.+..+.+|...|++++|+|++ .|++++.|++|++|+.. + .....+.+|...|.+++|+| ++. +++++.|
T Consensus        83 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d  162 (814)
T 3mkq_A           83 NYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLD  162 (814)
T ss_dssp             ETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETT
T ss_pred             ECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCC
Confidence            999999999999999999999999999 89999999999999943 3 66788889999999999999 554 7799999


Q ss_pred             CeEEEEECCCCeEEEEEeCCC-CcEEEEEE----cCCEEEEEeCCCeEEEEECCCC---ceEeeCCccEEEEEEcCCCc-
Q psy7057         140 ASIRVWDSTTGKCVHTMYGHP-NFIYSVAA----HGDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVAILPNSD-  210 (557)
Q Consensus       140 g~I~vwd~~~~~~~~~~~~h~-~~V~~l~~----~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p~g~-  210 (557)
                      ++|++||+.+++....+..+. ..+.++++    ++.+|++++.|+.|++||..+.   ..+..|...|.+++|+|++. 
T Consensus       163 g~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~  242 (814)
T 3mkq_A          163 RTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPI  242 (814)
T ss_dssp             SEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSE
T ss_pred             CeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCE
Confidence            999999999888777777654 88999998    5679999999999999998766   56667888999999999998 


Q ss_pred             EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCC
Q psy7057         211 IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPD  273 (557)
Q Consensus       211 l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~  273 (557)
                      +++++.||.|++|+..+.+....  ...+...+..+.+.+.....+++++.|+.+.+|++...
T Consensus       243 l~~~~~dg~v~vwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (814)
T 3mkq_A          243 IISGSEDGTLKIWNSSTYKVEKT--LNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGND  303 (814)
T ss_dssp             EEEEETTSCEEEEETTTCSEEEE--ECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSCC
T ss_pred             EEEEeCCCeEEEEECCCCcEEEE--eecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCCC
Confidence            88999999999999987665432  23455678888888877665566777888899987654

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=99.97  E-value=4.5e-29  Score=264.08  Aligned_cols=266  Identities=27%  Similarity=0.398  Sum_probs=226.9

Q ss_pred             EEEEEeccCcccEEEEEEcCCCcEEEEECCCcEEEEcCCC--------------CCCCCCCCEEEEEECCCeEEEEECCC
Q psy7057           3 KLSTALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPND--------------LSPGAKVNTLLSASWDMTAKLWCLES   68 (557)
Q Consensus         3 kl~~~l~gH~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~--------------~~~~~~~~~l~sgs~Dg~i~iwd~~~   68 (557)
                      ++...+.+|.+.|++++|++ ..|++|+.||+|++||+.+              .+...+++.+++|+.|++|++||+.+
T Consensus       150 ~~~~~~~~h~~~v~~~~~~~-~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~i~~wd~~~  228 (445)
T 2ovr_B          150 KCLRTLVGHTGGVWSSQMRD-NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIET  228 (445)
T ss_dssp             CEEEECCCCSSCEEEEEEET-TEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSS
T ss_pred             cEEEEEcCCCCCEEEEEecC-CEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEecCCEEEEEeCCCEEEEEECCC
Confidence            56788999999999999983 3599999999999999876              11112367899999999999999999


Q ss_pred             CeEEEEEcccCCcEEEEEEcCCCEEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCeEEEEECCCeEEEEEC
Q psy7057          69 QQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDS  147 (557)
Q Consensus        69 ~~~~~~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~  147 (557)
                      ++++..+.+|...|.++.+ ....+++|+.|+.|++|| .+++++..+.+|...|.++++ ....+++++.|++|++||+
T Consensus       229 ~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~d~~i~i~d~  306 (445)
T 2ovr_B          229 GQCLHVLMGHVAAVRCVQY-DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF-DGIHVVSGSLDTSIRVWDV  306 (445)
T ss_dssp             CCEEEEEECCSSCEEEEEE-CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE-CSSEEEEEETTSCEEEEET
T ss_pred             CcEEEEEcCCcccEEEEEE-CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE-CCCEEEEEeCCCeEEEEEC
Confidence            9999999999999999999 334899999999999999 567888999999999999999 3455889999999999999


Q ss_pred             CCCeEEEEEeCCCCcEEEEEEcCCEEEEEeCCCeEEEEECCCC---ceEee---CCccEEEEEEcCCCcEEEEEcCCcEE
Q psy7057         148 TTGKCVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQ---NSFMI---PAMSVWAVAILPNSDIVTGSSDGIVR  221 (557)
Q Consensus       148 ~~~~~~~~~~~h~~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~~---~~~~~---~~~~v~~v~~~p~g~l~sg~~Dg~I~  221 (557)
                      ++++++.++.+|...+.++.++++.+++++.|+.|++||+++.   ..+..   |...|.++++++ ..+++|+.||.|+
T Consensus       307 ~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~l~s~~~dg~v~  385 (445)
T 2ovr_B          307 ETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK-NFVITSSDDGTVK  385 (445)
T ss_dssp             TTCCEEEEECCCCSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECS-SEEEEEETTSEEE
T ss_pred             CCCCEEEEEcCCcccEEEEEEeCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEECC-CEEEEEeCCCeEE
Confidence            9999999999999999999999999999999999999998765   34443   677899999964 2399999999999


Q ss_pred             EEecCCCCcchhH---HHhcccceeEEEeccCCCceeEEEEeCCCc----EEEEecCCC
Q psy7057         222 VFSANPDRQAEDA---VQAQYAEEVKKLKSANEQEIGGVKVSDDGI----VRVFSANPD  273 (557)
Q Consensus       222 iwd~~~~~~~~~~---~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~----IrvW~~~~~  273 (557)
                      +|++.+++.....   ....+...+..+.+.+. ...+++++.||+    |+||+++.+
T Consensus       386 iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~la~~~~dg~~~~~l~v~df~~~  443 (445)
T 2ovr_B          386 LWDLKTGEFIRNLVTLESGGSGGVVWRIRASNT-KLVCAVGSRNGTEETKLLVLDFDVD  443 (445)
T ss_dssp             EEETTTCCEEEEEEECTTGGGTCEEEEEEECSS-EEEEEEECSSSSSCCEEEEEECCCC
T ss_pred             EEECCCCceeeeeeccccCCCCceEEEEEecCC-EEEEEEcccCCCCccEEEEEECCCC
Confidence            9999987765332   22456677888888764 456889999998    999999865

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=99.97  E-value=7.4e-30  Score=261.01  Aligned_cols=221  Identities=21%  Similarity=0.282  Sum_probs=186.0

Q ss_pred             EEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEEC
Q psy7057           4 LSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCL   66 (557)
Q Consensus         4 l~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~   66 (557)
                      ....+.+|...|++++|+|++. |++|+.|++|++||+.+                +++++++.+|++++.|++|++||+
T Consensus        68 ~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~  147 (343)
T 2xzm_R           68 PHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNI  147 (343)
T ss_dssp             EEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEES
T ss_pred             ccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEec
Confidence            4567899999999999999998 88999999999999876                677889999999999999999999


Q ss_pred             CCCeEEEEEc---ccCCcEEEEEEcCCC-----------EEEEEECCCeEEEEeCCCcEEEEEeCCCCCEEEEEEeCCCe
Q psy7057          67 ESQQCKLTIR---QHEMAVWGVIQLANG-----------IIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTD  132 (557)
Q Consensus        67 ~~~~~~~~l~---~h~~~V~~l~~~~~~-----------~l~sgs~dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~~~  132 (557)
                      .. .....+.   .|...|.+++|+|++           .+++++.|++|++||........+.+|...|.+++|+|++.
T Consensus       148 ~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~h~~~v~~~~~s~~g~  226 (343)
T 2xzm_R          148 LG-ECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQIRYTFKAHESNVNHLSISPNGK  226 (343)
T ss_dssp             SS-CEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTTEEEEEEECCSSCEEEEEECTTSS
T ss_pred             cC-CceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCCceeEEEcCccccceEEEECCCCC
Confidence            74 4444443   689999999999964           79999999999999988888889999999999999999987


Q ss_pred             -EEEEECCCeEEEEECCC-CeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCCc-----eEe---------
Q psy7057         133 -FVSCSNDASIRVWDSTT-GKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQN-----SFM---------  194 (557)
Q Consensus       133 -lvs~s~Dg~I~vwd~~~-~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~~-----~~~---------  194 (557)
                       |++|+.|++|++||++. ..+...+. +...|.+++|  ++.++ +++.|+.|++|++.+..     .+.         
T Consensus       227 ~l~sgs~dg~v~iwd~~~~~~~~~~~~-~~~~v~~v~~sp~~~~l-a~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~  304 (343)
T 2xzm_R          227 YIATGGKDKKLLIWDILNLTYPQREFD-AGSTINQIAFNPKLQWV-AVGTDQGVKIFNLMTQSKAPVCTIEAEPITKAEG  304 (343)
T ss_dssp             EEEEEETTCEEEEEESSCCSSCSEEEE-CSSCEEEEEECSSSCEE-EEEESSCEEEEESSSCCSCSEEECCCCSGGGBTT
T ss_pred             EEEEEcCCCeEEEEECCCCcccceeec-CCCcEEEEEECCCCCEE-EEECCCCEEEEEeCCCCCCceEEeecCcchhhhh
Confidence             77999999999999954 44444443 5567999999  44444 56678889999975441     222         


Q ss_pred             --eCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCC
Q psy7057         195 --IPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANP  227 (557)
Q Consensus       195 --~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~  227 (557)
                        .|...|.+++|+|++. |++|+.||+|++|++.+
T Consensus       305 ~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~  340 (343)
T 2xzm_R          305 QKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFET  340 (343)
T ss_dssp             BCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEE
T ss_pred             hcCCCCceEEEEECCCCCeEEEecCCceEEEEEEEc
Confidence              4667899999999998 99999999999999764

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=99.97  E-value=7.9e-30  Score=265.54  Aligned_cols=261  Identities=15%  Similarity=0.166  Sum_probs=225.4

Q ss_pred             cCcccEEEEEEcCCCc--EEEEECCCcEEEEcC----CC--------------------------------CCCCCCCCE
Q psy7057          10 GHSMDVRSLSVTPDGC--ILSASRDKSAKLWKP----ND--------------------------------LSPGAKVNT   51 (557)
Q Consensus        10 gH~~~V~~l~~spdg~--l~sgs~Dg~V~iWd~----~~--------------------------------~~~~~~~~~   51 (557)
                      .|.+.|++++|+|++.  |++|+.||.|++|++    .+                                +.+++++.+
T Consensus        43 ~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~  122 (425)
T 1r5m_A           43 VKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNS  122 (425)
T ss_dssp             EECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSE
T ss_pred             eccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCE
Confidence            4569999999999987  779999999999999    32                                456778999


Q ss_pred             EEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCC--------
Q psy7057          52 LLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDC--------  121 (557)
Q Consensus        52 l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~--------  121 (557)
                      |++++.|+.|++|+ .+++.+..+..|...|.+++|+|++ .|++++.|+.|++|| .+++.+..+..+...        
T Consensus       123 l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  201 (425)
T 1r5m_A          123 IVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAEN  201 (425)
T ss_dssp             EEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC-----------
T ss_pred             EEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeecc
Confidence            99999999999999 6778899999999999999999988 899999999999999 467778888877776        


Q ss_pred             -------EEEEEEeCCCeEEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC--
Q psy7057         122 -------VRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ--  190 (557)
Q Consensus       122 -------V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~--  190 (557)
                             +.+++|++++.+++++.|+.|++||+++++++..+..|...|.++++  ++++|++++.|+.|++||+...  
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~  281 (425)
T 1r5m_A          202 HSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNS  281 (425)
T ss_dssp             ----CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSC
T ss_pred             ccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCcc
Confidence                   99999999999999999999999999999999999999999999999  6779999999999999997654  


Q ss_pred             -ceEeeCCccEEEEEEcCCCcEEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEe
Q psy7057         191 -NSFMIPAMSVWAVAILPNSDIVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFS  269 (557)
Q Consensus       191 -~~~~~~~~~v~~v~~~p~g~l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~  269 (557)
                       ..+..|...|.+++|+|++.+++++.|+.|++|++.+.+....  ...+...+..+.+.+... .+++++.||.|++|+
T Consensus       282 ~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~--~~~~~~~i~~~~~s~~~~-~l~~~~~dg~i~i~~  358 (425)
T 1r5m_A          282 QNCFYGHSQSIVSASWVGDDKVISCSMDGSVRLWSLKQNTLLAL--SIVDGVPIFAGRISQDGQ-KYAVAFMDGQVNVYD  358 (425)
T ss_dssp             SEEECCCSSCEEEEEEETTTEEEEEETTSEEEEEETTTTEEEEE--EECTTCCEEEEEECTTSS-EEEEEETTSCEEEEE
T ss_pred             ceEecCCCccEEEEEECCCCEEEEEeCCCcEEEEECCCCcEeEe--cccCCccEEEEEEcCCCC-EEEEEECCCeEEEEE
Confidence             5666788899999999999888999999999999987765432  234556788888877654 588999999999999


Q ss_pred             cCCCh
Q psy7057         270 ANPDR  274 (557)
Q Consensus       270 ~~~~~  274 (557)
                      +...+
T Consensus       359 ~~~~~  363 (425)
T 1r5m_A          359 LKKLN  363 (425)
T ss_dssp             CHHHH
T ss_pred             CCCCc
Confidence            87543

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=99.97  E-value=4.9e-31  Score=275.03  Aligned_cols=263  Identities=14%  Similarity=0.104  Sum_probs=223.1

Q ss_pred             CcccEEEEEEcCCCc--EEEE----------ECCCcEEEEcCCC------------------CCCCCCCCEEEEEECCCe
Q psy7057          11 HSMDVRSLSVTPDGC--ILSA----------SRDKSAKLWKPND------------------LSPGAKVNTLLSASWDMT   60 (557)
Q Consensus        11 H~~~V~~l~~spdg~--l~sg----------s~Dg~V~iWd~~~------------------~~~~~~~~~l~sgs~Dg~   60 (557)
                      +...|.+++|+|+++  |++|          +.|++|++|++.+                  +.+++++.+|++|+.|+.
T Consensus        11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~   90 (416)
T 2pm9_A           11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGS   90 (416)
T ss_dssp             EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSC
T ss_pred             hhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCCe
Confidence            456889999999986  6788          8999999999874                  566788999999999999


Q ss_pred             EEEEECCC----CeEEEEEcccCCcEEEEEEcCC-C-EEEEEECCCeEEEEeCC-Cc------EE---EEEeCCCCCEEE
Q psy7057          61 AKLWCLES----QQCKLTIRQHEMAVWGVIQLAN-G-IIVTGCADKTIKLHSEE-GE------FL---KTLTGHTDCVRG  124 (557)
Q Consensus        61 i~iwd~~~----~~~~~~l~~h~~~V~~l~~~~~-~-~l~sgs~dg~I~vwd~~-~~------~~---~~l~~h~~~V~~  124 (557)
                      |++|++.+    .+.+..+.+|...|.+++|+|+ + +|++++.|+.|++||.. +.      ..   ..+..|...|.+
T Consensus        91 v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~  170 (416)
T 2pm9_A           91 LELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVIS  170 (416)
T ss_dssp             EEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCE
T ss_pred             EEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeE
Confidence            99999987    4588889999999999999997 5 99999999999999943 32      22   234679999999


Q ss_pred             EEEeCC-Ce-EEEEECCCeEEEEECCCCeEEEEEeCC------CCcEEEEEE--cC-CEEEEEeCCC---eEEEEECCCC
Q psy7057         125 LAVLND-TD-FVSCSNDASIRVWDSTTGKCVHTMYGH------PNFIYSVAA--HG-DLITSGGEDQ---CVCVYQNKAQ  190 (557)
Q Consensus       125 l~~~~~-~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h------~~~V~~l~~--~~-~~l~s~s~Dg---~I~iwd~~~~  190 (557)
                      ++|+|+ +. |++++.|+.|++||+++++++..+..|      ...|.+++|  ++ .++++++.|+   .|++||++..
T Consensus       171 ~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~  250 (416)
T 2pm9_A          171 LAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNA  250 (416)
T ss_dssp             EEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTST
T ss_pred             EEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCC
Confidence            999998 44 779999999999999999999999876      789999999  33 5899999999   9999997653


Q ss_pred             ----ceEe-eCCccEEEEEEcC-CCc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCC
Q psy7057         191 ----NSFM-IPAMSVWAVAILP-NSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDG  263 (557)
Q Consensus       191 ----~~~~-~~~~~v~~v~~~p-~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG  263 (557)
                          ..+. .|...|.+++|+| ++. |++++.|+.|++|++.+.+...  ....+...+..+.+.+..+..+++++.||
T Consensus       251 ~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~--~~~~~~~~v~~~~~s~~~~~~l~s~~~d~  328 (416)
T 2pm9_A          251 NTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLS--QFPARGNWCFKTKFAPEAPDLFACASFDN  328 (416)
T ss_dssp             TSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEE--EEECSSSCCCCEEECTTCTTEEEECCSSS
T ss_pred             CCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccce--eecCCCCceEEEEECCCCCCEEEEEecCC
Confidence                4555 7888999999999 777 9999999999999998876542  23356677888888888766789999999


Q ss_pred             cEEEEecCCChh
Q psy7057         264 IVRVFSANPDRQ  275 (557)
Q Consensus       264 ~IrvW~~~~~~~  275 (557)
                      .|++|++.....
T Consensus       329 ~i~iw~~~~~~~  340 (416)
T 2pm9_A          329 KIEVQTLQNLTN  340 (416)
T ss_dssp             EEEEEESCCCCC
T ss_pred             cEEEEEccCCCC
Confidence            999999987653

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=99.97  E-value=3.2e-29  Score=266.18  Aligned_cols=263  Identities=22%  Similarity=0.275  Sum_probs=213.6

Q ss_pred             EEEEeccCcccE-EEEEEcCCCcEEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEEC
Q psy7057           4 LSTALYGHSMDV-RSLSVTPDGCILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCL   66 (557)
Q Consensus         4 l~~~l~gH~~~V-~~l~~spdg~l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~   66 (557)
                      ....|.+|.+.| .++.+++ +.|++|+.||+|++||+.+                +.+.+++ .|++|+.|++|++||+
T Consensus       113 ~~~~l~~h~~~v~~~~~~~~-~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~  190 (464)
T 3v7d_B          113 QRTTLRGHMTSVITCLQFED-NYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDI  190 (464)
T ss_dssp             EEEEEECCSSSCEEEEEEET-TEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEET
T ss_pred             ceEEEcCCCCCcEEEEEECC-CEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEEC
Confidence            456899999885 6666643 3599999999999999876                4455555 9999999999999999


Q ss_pred             CCCeEEEEEcccCCcEEEEEEcC--CC-EEEEEECCCeEEEEeCCCc------------------------EEEEEeCCC
Q psy7057          67 ESQQCKLTIRQHEMAVWGVIQLA--NG-IIVTGCADKTIKLHSEEGE------------------------FLKTLTGHT  119 (557)
Q Consensus        67 ~~~~~~~~l~~h~~~V~~l~~~~--~~-~l~sgs~dg~I~vwd~~~~------------------------~~~~l~~h~  119 (557)
                      .+++++..+.+|...|.++++++  ++ .+++|+.|++|++||....                        .+..+.+|.
T Consensus       191 ~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (464)
T 3v7d_B          191 KKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHM  270 (464)
T ss_dssp             TTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCS
T ss_pred             CCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCcc
Confidence            99999999999999999999984  55 8999999999999994322                        256788999


Q ss_pred             CCEEEEEEeCCCeEEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC---ceEe
Q psy7057         120 DCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ---NSFM  194 (557)
Q Consensus       120 ~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~---~~~~  194 (557)
                      ..|.++... ...+++++.|++|++||+++++++..+.+|...|.++++  ++..+++++.|+.|++||+++.   ..+.
T Consensus       271 ~~v~~~~~~-~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~  349 (464)
T 3v7d_B          271 ASVRTVSGH-GNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQ  349 (464)
T ss_dssp             SCEEEEEEE-TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred             ceEEEEcCC-CCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEe
Confidence            999988543 245889999999999999999999999999999999999  6779999999999999998766   5667


Q ss_pred             eCCccEEEEEEcCCCcEEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCCh
Q psy7057         195 IPAMSVWAVAILPNSDIVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDR  274 (557)
Q Consensus       195 ~~~~~v~~v~~~p~g~l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~~  274 (557)
                      .|...|.++++++ ..+++++.||.|++||+.+.......   .+...+..+.+.+... .+++++ ||.|++|++..++
T Consensus       350 ~h~~~v~~~~~~~-~~l~s~s~dg~v~vwd~~~~~~~~~~---~~~~~~~~~~~~~~~~-~l~~~~-dg~i~iwd~~~g~  423 (464)
T 3v7d_B          350 GHTALVGLLRLSD-KFLVSAAADGSIRGWDANDYSRKFSY---HHTNLSAITTFYVSDN-ILVSGS-ENQFNIYNLRSGK  423 (464)
T ss_dssp             CCSSCEEEEEECS-SEEEEEETTSEEEEEETTTCCEEEEE---ECTTCCCEEEEEECSS-EEEEEE-TTEEEEEETTTCC
T ss_pred             CCCCcEEEEEEcC-CEEEEEeCCCcEEEEECCCCceeeee---cCCCCccEEEEEeCCC-EEEEec-CCeEEEEECCCCc
Confidence            7889999999984 34999999999999999876543221   1223333444444433 466666 9999999988764


Q ss_pred             h
Q psy7057         275 Q  275 (557)
Q Consensus       275 ~  275 (557)
                      .
T Consensus       424 ~  424 (464)
T 3v7d_B          424 L  424 (464)
T ss_dssp             E
T ss_pred             E
Confidence            3

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=99.97  E-value=7.1e-31  Score=273.78  Aligned_cols=263  Identities=16%  Similarity=0.156  Sum_probs=216.4

Q ss_pred             cCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC--------------------CCCCCC-CCEEEEEECCCeEEEEECC
Q psy7057          10 GHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND--------------------LSPGAK-VNTLLSASWDMTAKLWCLE   67 (557)
Q Consensus        10 gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~--------------------~~~~~~-~~~l~sgs~Dg~i~iwd~~   67 (557)
                      .|...|++++|+|++. |++|+.||.|++|++..                    +.++++ +.+|++++.|++|++||+.
T Consensus        65 ~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~  144 (416)
T 2pm9_A           65 QVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMN  144 (416)
T ss_dssp             CCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTT
T ss_pred             ecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECC
Confidence            5889999999999998 89999999999999864                    556776 8899999999999999998


Q ss_pred             CCe------EEEE---EcccCCcEEEEEEcCC-C-EEEEEECCCeEEEEe-CCCcEEEEEeCC------CCCEEEEEEeC
Q psy7057          68 SQQ------CKLT---IRQHEMAVWGVIQLAN-G-IIVTGCADKTIKLHS-EEGEFLKTLTGH------TDCVRGLAVLN  129 (557)
Q Consensus        68 ~~~------~~~~---l~~h~~~V~~l~~~~~-~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h------~~~V~~l~~~~  129 (557)
                      +++      ....   +..|...|.+++|+|+ + .+++++.|+.|++|| ..++.+..+..|      ...|.+++|+|
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  224 (416)
T 2pm9_A          145 KCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHP  224 (416)
T ss_dssp             TTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECS
T ss_pred             CCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECC
Confidence            876      3333   3679999999999998 4 899999999999999 456777777766      78999999999


Q ss_pred             CC--eEEEEECCC---eEEEEECCCC-eEEEEEe-CCCCcEEEEEE---cCCEEEEEeCCCeEEEEECCCC---ceEeeC
Q psy7057         130 DT--DFVSCSNDA---SIRVWDSTTG-KCVHTMY-GHPNFIYSVAA---HGDLITSGGEDQCVCVYQNKAQ---NSFMIP  196 (557)
Q Consensus       130 ~~--~lvs~s~Dg---~I~vwd~~~~-~~~~~~~-~h~~~V~~l~~---~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~  196 (557)
                      ++  .+++++.|+   .|++||++++ +++..+. +|...|.+++|   ++.+|++++.|++|++||+.+.   ..+..|
T Consensus       225 ~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~  304 (416)
T 2pm9_A          225 KNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPAR  304 (416)
T ss_dssp             SCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECS
T ss_pred             CCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCC
Confidence            86  477999998   9999999986 6777787 89999999999   4578999999999999997765   566778


Q ss_pred             CccEEEEEEcCCC-c-EEEEEcCCcEEEEecCCCCcchhHH---------------Hhc------------------ccc
Q psy7057         197 AMSVWAVAILPNS-D-IVTGSSDGIVRVFSANPDRQAEDAV---------------QAQ------------------YAE  241 (557)
Q Consensus       197 ~~~v~~v~~~p~g-~-l~sg~~Dg~I~iwd~~~~~~~~~~~---------------~~~------------------~~~  241 (557)
                      ...|.+++|+|++ . +++++.|+.|++|++..........               ...                  +..
T Consensus       305 ~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  384 (416)
T 2pm9_A          305 GNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGE  384 (416)
T ss_dssp             SSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCC
T ss_pred             CCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccC
Confidence            8999999999998 5 8899999999999998765322110               000                  233


Q ss_pred             eeEEEeccCCCceeEEEEeCCCcEEEEecCCC
Q psy7057         242 EVKKLKSANEQEIGGVKVSDDGIVRVFSANPD  273 (557)
Q Consensus       242 ~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~  273 (557)
                      .+..+.+.+.. ..+++++.||+|+||++.++
T Consensus       385 ~~~~~~~s~dg-~~la~~~~d~~v~~w~~~~~  415 (416)
T 2pm9_A          385 PSPAAHWAFGG-KLVQITPDGKGVSITNPKIS  415 (416)
T ss_dssp             CSCCCEEETTT-EEECBCTTSSCBCCBCCCCC
T ss_pred             CccceEEeeCC-eEEEEeCCCCeEEEEEeccC
Confidence            34445555443 45788899999999998865

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.97  E-value=9.6e-31  Score=282.85  Aligned_cols=264  Identities=11%  Similarity=0.012  Sum_probs=203.0

Q ss_pred             CcccEEEEEEcCCC---------c-EE-------------------EEECCCcEEEEcCCC-------------------
Q psy7057          11 HSMDVRSLSVTPDG---------C-IL-------------------SASRDKSAKLWKPND-------------------   42 (557)
Q Consensus        11 H~~~V~~l~~spdg---------~-l~-------------------sgs~Dg~V~iWd~~~-------------------   42 (557)
                      +.+.|.+|+|+|++         . ||                   +++.|++|+||++..                   
T Consensus       132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~  211 (524)
T 2j04_B          132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVW  211 (524)
T ss_dssp             CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCCSEE
T ss_pred             CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEE
Confidence            56788888888875         3 44                   456889999998743                   


Q ss_pred             -CCCCCC------CCEEEEEECCCeEEEEECCCCe-----------EEEEEcccCCcEEEEEEcCCCEEEEEECCCeEEE
Q psy7057          43 -LSPGAK------VNTLLSASWDMTAKLWCLESQQ-----------CKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKL  104 (557)
Q Consensus        43 -~~~~~~------~~~l~sgs~Dg~i~iwd~~~~~-----------~~~~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~v  104 (557)
                       ++++|.      +.+|++++.|++|++||+.++.           +..++.+|...|++++|++++.|++|+.||+|++
T Consensus       212 ~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~~lasgs~DgtV~l  291 (524)
T 2j04_B          212 DLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPTTVVCGFKNGFVAE  291 (524)
T ss_dssp             EEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSSEEEEEETTSEEEE
T ss_pred             EEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCCeEEEEeCCCEEEE
Confidence             344543      5799999999999999997653           2347889999999999999889999999999999


Q ss_pred             EeCC-C-cEEEEEeCCCCCEEEE--EEeCCC-e-EEEEECCCeEEEEECCCCeEEEEEeCCCC--cEEEEEE--cCCEEE
Q psy7057         105 HSEE-G-EFLKTLTGHTDCVRGL--AVLNDT-D-FVSCSNDASIRVWDSTTGKCVHTMYGHPN--FIYSVAA--HGDLIT  174 (557)
Q Consensus       105 wd~~-~-~~~~~l~~h~~~V~~l--~~~~~~-~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~--~V~~l~~--~~~~l~  174 (557)
                      ||.. + .+...+.+|...|+++  ++++++ . |+|||.|++|+|||+++++++.++.+|..  .|.+++|  ++..++
T Consensus       292 WD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~  371 (524)
T 2j04_B          292 FDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYI  371 (524)
T ss_dssp             EETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEE
T ss_pred             EECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEE
Confidence            9964 3 3456788999999999  467776 4 78999999999999999887777777753  5788898  567899


Q ss_pred             EEeCCCeEEEEECCCC---ceEeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcch------------------
Q psy7057         175 SGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAE------------------  232 (557)
Q Consensus       175 s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~------------------  232 (557)
                      +++.|++|++||++..   ..+..|...|++|+|+|++. |++|+.|++|++|+........                  
T Consensus       372 s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~  451 (524)
T 2j04_B          372 YSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDY  451 (524)
T ss_dssp             EECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSSTTTCC------CCCCEEEECBC
T ss_pred             EeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHhhccccccCccceeeeEEEEecc
Confidence            9999999999998765   56788999999999999998 8999999999999864321100                  


Q ss_pred             ------------------------hHHHhcccceeEEEeccCCCc--eeEEEEeCCCcEEEEecCCCh
Q psy7057         233 ------------------------DAVQAQYAEEVKKLKSANEQE--IGGVKVSDDGIVRVFSANPDR  274 (557)
Q Consensus       233 ------------------------~~~~~~~~~~v~~l~~~~~~~--~~~vs~s~DG~IrvW~~~~~~  274 (557)
                                              ......+...|..+.+.+...  ..+++|+.||+||||.+..+.
T Consensus       452 sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~~~  519 (524)
T 2j04_B          452 SIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSLEH  519 (524)
T ss_dssp             CSSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECSCC-
T ss_pred             CCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEEccccc
Confidence                                    011223445566677776643  467889999999999987653

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=99.97  E-value=1.7e-29  Score=254.79  Aligned_cols=259  Identities=17%  Similarity=0.193  Sum_probs=217.2

Q ss_pred             CcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEECCCCe---
Q psy7057          11 HSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCLESQQ---   70 (557)
Q Consensus        11 H~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~---   70 (557)
                      |.+.|.+++|+|||+ ++++..++.+.+|....                +++++++.+|++++ |+.|++|++.+++   
T Consensus         8 ~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~   86 (337)
T 1gxr_A            8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKS   86 (337)
T ss_dssp             EEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCS
T ss_pred             cCCceeEEEECCCCCEEEeecCCCcEeccccCCccccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCcee
Confidence            567899999999999 66666666666654433                67788899999999 9999999998764   


Q ss_pred             EEEEEc--ccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCC-Cc--EEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEE
Q psy7057          71 CKLTIR--QHEMAVWGVIQLANG-IIVTGCADKTIKLHSEE-GE--FLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIR  143 (557)
Q Consensus        71 ~~~~l~--~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~-~~--~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~  143 (557)
                      ....+.  .|...|.+++|+|++ .|++++.|+.|++||.. ++  ....+..|...|.+++|+|++. +++++.|+.|+
T Consensus        87 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~  166 (337)
T 1gxr_A           87 PVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIA  166 (337)
T ss_dssp             CSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred             eeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEE
Confidence            233333  799999999999998 89999999999999954 33  5667888999999999999976 77999999999


Q ss_pred             EEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCCc--eEeeCCccEEEEEEcCCCc-EEEEEcCC
Q psy7057         144 VWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQN--SFMIPAMSVWAVAILPNSD-IVTGSSDG  218 (557)
Q Consensus       144 vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~~--~~~~~~~~v~~v~~~p~g~-l~sg~~Dg  218 (557)
                      +||+++++.+..+..|...|.++++  +++.|++++.|+.|++||++...  ....+...+.+++|+|++. +++++.|+
T Consensus       167 ~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~  246 (337)
T 1gxr_A          167 VWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESS  246 (337)
T ss_dssp             EEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTS
T ss_pred             EEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCC
Confidence            9999999999999999999999999  67799999999999999987763  2335677899999999998 88999999


Q ss_pred             cEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCCh
Q psy7057         219 IVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDR  274 (557)
Q Consensus       219 ~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~~  274 (557)
                      .|++|++......   ....+...+..+.+.+... .+++++.||.|++|++..++
T Consensus       247 ~i~~~~~~~~~~~---~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~~~~~~~~  298 (337)
T 1gxr_A          247 NVEVLHVNKPDKY---QLHLHESCVLSLKFAYCGK-WFVSTGKDNLLNAWRTPYGA  298 (337)
T ss_dssp             CEEEEETTSSCEE---EECCCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTCC
T ss_pred             cEEEEECCCCCeE---EEcCCccceeEEEECCCCC-EEEEecCCCcEEEEECCCCe
Confidence            9999999877643   2345667788888877655 58899999999999987653

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=99.97  E-value=4.4e-29  Score=260.96  Aligned_cols=259  Identities=14%  Similarity=0.173  Sum_probs=210.9

Q ss_pred             ccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEE
Q psy7057          13 MDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTI   75 (557)
Q Consensus        13 ~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l   75 (557)
                      ..+...+|+|+++ |++|+.||.|++||+..                +.+++++.+|++|+.|++|++||+.+++.+..+
T Consensus        98 ~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~  177 (420)
T 3vl1_A           98 DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTL  177 (420)
T ss_dssp             CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEE
T ss_pred             CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEE
Confidence            4455557899998 88999999999999876                677888999999999999999999999999999


Q ss_pred             cccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeC---CCCCEEEEEE---------------------eC
Q psy7057          76 RQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTG---HTDCVRGLAV---------------------LN  129 (557)
Q Consensus        76 ~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~---h~~~V~~l~~---------------------~~  129 (557)
                      .+|...|.+++|+|++ .|++++.|++|++|| .+++++..+..   |...|.++++                     +|
T Consensus       178 ~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~  257 (420)
T 3vl1_A          178 IGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGT  257 (420)
T ss_dssp             ECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSC
T ss_pred             cCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcC
Confidence            9999999999999988 899999999999999 56777777764   4455666655                     57


Q ss_pred             CCe-EEEEECCCeEEEEECCCCeEEEEEe-CCCCcEEEEEE--cCC-EEEEEeCCCeEEEEECCCC----ceEee-CCcc
Q psy7057         130 DTD-FVSCSNDASIRVWDSTTGKCVHTMY-GHPNFIYSVAA--HGD-LITSGGEDQCVCVYQNKAQ----NSFMI-PAMS  199 (557)
Q Consensus       130 ~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~-~h~~~V~~l~~--~~~-~l~s~s~Dg~I~iwd~~~~----~~~~~-~~~~  199 (557)
                      ++. +++++.|+.|++||+++++.+..+. .|...|.+++|  ++. +|++++.||.|++||+++.    ..+.. +...
T Consensus       258 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~  337 (420)
T 3vl1_A          258 YGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTP  337 (420)
T ss_dssp             TTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSC
T ss_pred             CCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCC
Confidence            776 7799999999999999998887775 48899999999  455 9999999999999997654    45555 6677


Q ss_pred             EEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcch-------hHHHhcccceeEEEeccCCCce--eEEEEeCCCcEEEEe
Q psy7057         200 VWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAE-------DAVQAQYAEEVKKLKSANEQEI--GGVKVSDDGIVRVFS  269 (557)
Q Consensus       200 v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~-------~~~~~~~~~~v~~l~~~~~~~~--~~vs~s~DG~IrvW~  269 (557)
                      |.++.+. ++. |++++.|+.|++|++.......       ......+...+..+.+.+....  .+++++.+|.+++|+
T Consensus       338 v~~~~~~-~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~  416 (420)
T 3vl1_A          338 INNVYFA-AGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYN  416 (420)
T ss_dssp             EEEEEEE-TTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEE
T ss_pred             ceEEEeC-CCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcCCceEEEEe
Confidence            8888665 555 8999999999999987642211       1122345566777877776551  478888999999999


Q ss_pred             cCC
Q psy7057         270 ANP  272 (557)
Q Consensus       270 ~~~  272 (557)
                      ++.
T Consensus       417 ~~~  419 (420)
T 3vl1_A          417 LSN  419 (420)
T ss_dssp             SCC
T ss_pred             ccC
Confidence            864

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=99.97  E-value=4.1e-29  Score=256.32  Aligned_cols=244  Identities=16%  Similarity=0.192  Sum_probs=195.7

Q ss_pred             EEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCCCCCCCCCCEEEEEECCCeEEEEECC--CCeEEEEEcccC
Q psy7057           3 KLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCLE--SQQCKLTIRQHE   79 (557)
Q Consensus         3 kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~~~~~~~~~~l~sgs~Dg~i~iwd~~--~~~~~~~l~~h~   79 (557)
                      ++...+.+|.+.|++++|+|++. |++|+.||+|++|                          ++.  +++.+..+.+|.
T Consensus         2 ~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw--------------------------~~~~~~~~~~~~~~~h~   55 (379)
T 3jrp_A            2 SMVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIF--------------------------EVEGETHKLIDTLTGHE   55 (379)
T ss_dssp             ---CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEE--------------------------EEETTEEEEEEEECCCS
T ss_pred             CccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEE--------------------------ecCCCcceeeeEecCCC
Confidence            35678999999999999999865 5555555555555                          444  446677889999


Q ss_pred             CcEEEEEEcCC--C-EEEEEECCCeEEEEeC-CCc--EEEEEeCCCCCEEEEEEeCC--Ce-EEEEECCCeEEEEECCCC
Q psy7057          80 MAVWGVIQLAN--G-IIVTGCADKTIKLHSE-EGE--FLKTLTGHTDCVRGLAVLND--TD-FVSCSNDASIRVWDSTTG  150 (557)
Q Consensus        80 ~~V~~l~~~~~--~-~l~sgs~dg~I~vwd~-~~~--~~~~l~~h~~~V~~l~~~~~--~~-lvs~s~Dg~I~vwd~~~~  150 (557)
                      ..|++++|+++  + .|++|+.|+.|++||. ++.  .+..+..|...|.+++|+|+  +. |++++.|+.|++||++++
T Consensus        56 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~  135 (379)
T 3jrp_A           56 GPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKEN  135 (379)
T ss_dssp             SCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTT
T ss_pred             CcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCC
Confidence            99999999875  5 9999999999999994 444  67788889999999999998  55 779999999999999877


Q ss_pred             --eEEEEEeCCCCcEEEEEEc---------------CCEEEEEeCCCeEEEEECCCC-------ceEeeCCccEEEEEEc
Q psy7057         151 --KCVHTMYGHPNFIYSVAAH---------------GDLITSGGEDQCVCVYQNKAQ-------NSFMIPAMSVWAVAIL  206 (557)
Q Consensus       151 --~~~~~~~~h~~~V~~l~~~---------------~~~l~s~s~Dg~I~iwd~~~~-------~~~~~~~~~v~~v~~~  206 (557)
                        .....+..|...|.+++|.               +..|++++.|+.|++||++..       ..+..|...|.+++|+
T Consensus       136 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~s  215 (379)
T 3jrp_A          136 GTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWS  215 (379)
T ss_dssp             SCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEEC
T ss_pred             CceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEEC
Confidence              3455677899999999993               578999999999999996543       3456688899999999


Q ss_pred             CC---Cc-EEEEEcCCcEEEEecCCCCcc---hhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCC
Q psy7057         207 PN---SD-IVTGSSDGIVRVFSANPDRQA---EDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPD  273 (557)
Q Consensus       207 p~---g~-l~sg~~Dg~I~iwd~~~~~~~---~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~  273 (557)
                      |+   +. |++++.||.|++|++......   .......+...+..+.+.+... .+++++.||.|++|++...
T Consensus       216 p~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~~dg~i~iw~~~~~  288 (379)
T 3jrp_A          216 PTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGN-VLALSGGDNKVTLWKENLE  288 (379)
T ss_dssp             CCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSC-CEEEEESSSSEEEEEEEET
T ss_pred             CCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCC-EEEEecCCCcEEEEeCCCC
Confidence            99   67 889999999999999876421   2222234667788888877665 5888999999999998753

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=99.97  E-value=1.8e-28  Score=257.78  Aligned_cols=258  Identities=18%  Similarity=0.244  Sum_probs=214.3

Q ss_pred             cEEEEEEcCCCcEEEEECCCcEEEEcCCC------------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEE
Q psy7057          14 DVRSLSVTPDGCILSASRDKSAKLWKPND------------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTI   75 (557)
Q Consensus        14 ~V~~l~~spdg~l~sgs~Dg~V~iWd~~~------------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l   75 (557)
                      .++.|+||+++.|++| .|++|+|||..+                  +++++++.+|++|+.|++|++||+.+++++..+
T Consensus       107 y~~~l~wS~~n~lAvg-ld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~  185 (420)
T 4gga_A          107 YLNLVDWSSGNVLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNM  185 (420)
T ss_dssp             TCBCEEECTTSEEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred             cceeEEECCCCEEEEE-eCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEE
Confidence            3567999987645554 599999999876                  678889999999999999999999999999999


Q ss_pred             cccCCcEEEEEEcCCCEEEEEECCCeEEEEeC--CCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEEEEECCCCe-
Q psy7057          76 RQHEMAVWGVIQLANGIIVTGCADKTIKLHSE--EGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGK-  151 (557)
Q Consensus        76 ~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~--~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~-  151 (557)
                      .+|...+.++.+.+ ..+++|+.|+.+++||.  ....+..+.+|...++.+.++|++. +++++.|+.+++|+..+++ 
T Consensus       186 ~~h~~~v~~~s~~~-~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~  264 (420)
T 4gga_A          186 TSHSARVGSLSWNS-YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEG  264 (420)
T ss_dssp             CCCSSCEEEEEEET-TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSS
T ss_pred             eCCCCceEEEeeCC-CEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccc
Confidence            99999999998853 48999999999999993  4566788999999999999999977 7799999999999998764 


Q ss_pred             ---EEEEEeCCCCcEEEEEE---cCCEEEEE--eCCCeEEEEECCCCc--eEeeCCccEEEEEEcCCCc-EEEEE--cCC
Q psy7057         152 ---CVHTMYGHPNFIYSVAA---HGDLITSG--GEDQCVCVYQNKAQN--SFMIPAMSVWAVAILPNSD-IVTGS--SDG  218 (557)
Q Consensus       152 ---~~~~~~~h~~~V~~l~~---~~~~l~s~--s~Dg~I~iwd~~~~~--~~~~~~~~v~~v~~~p~g~-l~sg~--~Dg  218 (557)
                         .+.....|...|.++++   .+..++++  +.|++|++||+.+..  ........+.++.|+|++. +++++  .|+
T Consensus       265 ~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~  344 (420)
T 4gga_A          265 GWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQN  344 (420)
T ss_dssp             CSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTC
T ss_pred             cceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCC
Confidence               45677889999999999   34566654  579999999988762  2233456899999999988 66554  799


Q ss_pred             cEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCChhh
Q psy7057         219 IVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQA  276 (557)
Q Consensus       219 ~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~~~~  276 (557)
                      .|+|||+.++++..  ...+|...|..+.+.++.. .++|||.||+||||++.+....
T Consensus       345 ~I~iwd~~~~~~v~--~l~gH~~~V~~l~~spdg~-~l~S~s~D~tvriWdv~~~~~~  399 (420)
T 4gga_A          345 QLVIWKYPTMAKVA--ELKGHTSRVLSLTMSPDGA-TVASAAADETLRLWRCFELDPA  399 (420)
T ss_dssp             CEEEEETTTCCEEE--EECCCSSCEEEEEECTTSS-CEEEEETTTEEEEECCSCSSCC
T ss_pred             EEEEEECCCCcEEE--EEcCCCCCEEEEEEcCCCC-EEEEEecCCeEEEEECCCCCcc
Confidence            99999998877653  3456888999999887655 5899999999999998765433

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=99.97  E-value=5.6e-29  Score=257.22  Aligned_cols=260  Identities=7%  Similarity=0.073  Sum_probs=199.5

Q ss_pred             cccEEEEEEcCCCc-EEEEECCC-------cEEEEcCCC------------------------CCCCCCCCEEEEEE---
Q psy7057          12 SMDVRSLSVTPDGC-ILSASRDK-------SAKLWKPND------------------------LSPGAKVNTLLSAS---   56 (557)
Q Consensus        12 ~~~V~~l~~spdg~-l~sgs~Dg-------~V~iWd~~~------------------------~~~~~~~~~l~sgs---   56 (557)
                      .-+|+|++|+||++ |++|+.+.       .|++|++..                        ++.+++++.+++|+   
T Consensus        14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~~~~~~~g~~~~   93 (365)
T 4h5i_A           14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDASKGIILVGCNEN   93 (365)
T ss_dssp             SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEETTEEEEECCCC
T ss_pred             CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeCCCEEEEEECCC
Confidence            35899999999999 77877543       599998764                        22334456666654   


Q ss_pred             --------CCCeEEEEECCCCe----EEEEE-----cccCCcEEEEEEcCCC-EEE--EEECCCeEEEEe-CCCcEEEEE
Q psy7057          57 --------WDMTAKLWCLESQQ----CKLTI-----RQHEMAVWGVIQLANG-IIV--TGCADKTIKLHS-EEGEFLKTL  115 (557)
Q Consensus        57 --------~Dg~i~iwd~~~~~----~~~~l-----~~h~~~V~~l~~~~~~-~l~--sgs~dg~I~vwd-~~~~~~~~l  115 (557)
                              .|+++|+|++.+..    .....     ..+...+.+++|+|+| +++  +++.|++|++|| .++.++..+
T Consensus        94 ~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~  173 (365)
T 4h5i_A           94 STKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEI  173 (365)
T ss_dssp             HHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEE
T ss_pred             ccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEe
Confidence                    47789999976542    12222     2245679999999999 554  455799999999 566667666


Q ss_pred             eCCCCCEEEEEEeCCCeEEEEECCCeEEEEECCCCeEEEE--EeCCCCcEEEEEE--cCCEEEEEeCCC----eEEEEEC
Q psy7057         116 TGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHT--MYGHPNFIYSVAA--HGDLITSGGEDQ----CVCVYQN  187 (557)
Q Consensus       116 ~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~~~~~--~~~h~~~V~~l~~--~~~~l~s~s~Dg----~I~iwd~  187 (557)
                      . |...|.+++|+|++.+++.+.++.+++|+..+++.+..  ...|...|.+++|  ++..+++++.|+    .+++|+.
T Consensus       174 ~-~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~  252 (365)
T 4h5i_A          174 E-TRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISI  252 (365)
T ss_dssp             E-CSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEE
T ss_pred             C-CCCceEEEEEccCCceEEeccceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeeccc
Confidence            5 77889999999999866444566778888777776644  3468899999999  777899998887    6888986


Q ss_pred             CCC-------ceEeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEE
Q psy7057         188 KAQ-------NSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKV  259 (557)
Q Consensus       188 ~~~-------~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~  259 (557)
                      ...       ..+..|...|++++|+|+|+ |++|+.|++|+|||+.+.++... ...+|...|..+.+.++.. .++|+
T Consensus       253 ~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~-~~~gH~~~V~~v~fSpdg~-~laS~  330 (365)
T 4h5i_A          253 KSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKI-FKQAHSFAITEVTISPDST-YVASV  330 (365)
T ss_dssp             ETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEE-ETTSSSSCEEEEEECTTSC-EEEEE
T ss_pred             ccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEE-ecCcccCCEEEEEECCCCC-EEEEE
Confidence            543       34567888999999999999 88999999999999998765432 2456888999999988765 68999


Q ss_pred             eCCCcEEEEecCCCh
Q psy7057         260 SDDGIVRVFSANPDR  274 (557)
Q Consensus       260 s~DG~IrvW~~~~~~  274 (557)
                      |.|++||||++.+..
T Consensus       331 S~D~tvrvw~ip~~~  345 (365)
T 4h5i_A          331 SAANTIHIIKLPLNY  345 (365)
T ss_dssp             ETTSEEEEEECCTTT
T ss_pred             eCCCeEEEEEcCCCC
Confidence            999999999996553

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=99.97  E-value=5.3e-29  Score=296.19  Aligned_cols=221  Identities=22%  Similarity=0.306  Sum_probs=193.8

Q ss_pred             EEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEECCC
Q psy7057           6 TALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCLES   68 (557)
Q Consensus         6 ~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~~~   68 (557)
                      ..+.+|.+.|++++|+|+|+ |++|+.||+|++||+.+                +++++++.+|++++.|++|++||+.+
T Consensus       609 ~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~  688 (1249)
T 3sfz_A          609 LVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSAT  688 (1249)
T ss_dssp             EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred             EEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCC
Confidence            46789999999999999998 88999999999999876                67888999999999999999999999


Q ss_pred             CeEEEEEcccCCcEEEEEEcCC--C-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEE
Q psy7057          69 QQCKLTIRQHEMAVWGVIQLAN--G-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIR  143 (557)
Q Consensus        69 ~~~~~~l~~h~~~V~~l~~~~~--~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~  143 (557)
                      ++++.++.+|...|.+++|+|+  + .+++|+.|+.|++|| .++.++..+.+|...|++++|+|++. +++++.|++|+
T Consensus       689 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~  768 (1249)
T 3sfz_A          689 GKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLR  768 (1249)
T ss_dssp             CCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEE
T ss_pred             CceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEE
Confidence            9999999999999999999994  3 899999999999999 67788999999999999999999976 77999999999


Q ss_pred             EEECCCCeEEEEEe-------------------------------------------------------CCCCcEEEEEE
Q psy7057         144 VWDSTTGKCVHTMY-------------------------------------------------------GHPNFIYSVAA  168 (557)
Q Consensus       144 vwd~~~~~~~~~~~-------------------------------------------------------~h~~~V~~l~~  168 (557)
                      +||+++++....+.                                                       +|...|.++++
T Consensus       769 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~  848 (1249)
T 3sfz_A          769 LWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDF  848 (1249)
T ss_dssp             EEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEE
T ss_pred             EEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEE
Confidence            99987765544332                                                       56677788888


Q ss_pred             --cCCEEEEEeCCCeEEEEECCCC---ceEeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecC
Q psy7057         169 --HGDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSAN  226 (557)
Q Consensus       169 --~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~  226 (557)
                        ++..+++++.|+.|++|+..+.   ..+..|...|.+++|+|++. +++++.|+.|++|++.
T Consensus       849 sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~  912 (1249)
T 3sfz_A          849 SPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETK  912 (1249)
T ss_dssp             CSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHH
T ss_pred             cCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEcc
Confidence              6778889999999999997765   45567888899999999887 8888889999998854

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=99.97  E-value=1.7e-28  Score=248.35  Aligned_cols=225  Identities=23%  Similarity=0.291  Sum_probs=192.8

Q ss_pred             EEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEEC
Q psy7057           4 LSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCL   66 (557)
Q Consensus         4 l~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~   66 (557)
                      ..+.+.+|...|++++|+|+++ |++++.|+.|++|+...                ..+.+.+..|++++.|+.+++||+
T Consensus        78 ~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~  157 (340)
T 4aow_A           78 PQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNT  157 (340)
T ss_dssp             EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECT
T ss_pred             eeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEe
Confidence            4678999999999999999998 88999999999999887                445667889999999999999998


Q ss_pred             CCCeE-EEEEcccCCcEEEEEEcCCC---EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCC
Q psy7057          67 ESQQC-KLTIRQHEMAVWGVIQLANG---IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDA  140 (557)
Q Consensus        67 ~~~~~-~~~l~~h~~~V~~l~~~~~~---~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg  140 (557)
                      ..... ...+.+|...+.+++|++++   .+++++.|+.|++|| .+++++..+.+|...|++++|+|++. |++|+.|+
T Consensus       158 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg  237 (340)
T 4aow_A          158 LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDG  237 (340)
T ss_dssp             TSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTC
T ss_pred             CCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCC
Confidence            77644 34457799999999999865   789999999999999 56678889999999999999999976 77999999


Q ss_pred             eEEEEECCCCeEEEEEeCCCCcEEEEEE-cCCEEEEEeCCCeEEEEECCCCc------------eEeeCCccEEEEEEcC
Q psy7057         141 SIRVWDSTTGKCVHTMYGHPNFIYSVAA-HGDLITSGGEDQCVCVYQNKAQN------------SFMIPAMSVWAVAILP  207 (557)
Q Consensus       141 ~I~vwd~~~~~~~~~~~~h~~~V~~l~~-~~~~l~s~s~Dg~I~iwd~~~~~------------~~~~~~~~v~~v~~~p  207 (557)
                      +|++||+++.+++..+.. ...|.++++ .+..+++++.|+.|++||++...            ....|...|++++|+|
T Consensus       238 ~i~iwd~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~  316 (340)
T 4aow_A          238 QAMLWDLNEGKHLYTLDG-GDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSA  316 (340)
T ss_dssp             EEEEEETTTTEEEEEEEC-SSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECT
T ss_pred             eEEEEEeccCceeeeecC-CceEEeeecCCCCceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECC
Confidence            999999999999998875 467899999 44567888889999999976542            1235677899999999


Q ss_pred             CCc-EEEEEcCCcEEEEecCCCC
Q psy7057         208 NSD-IVTGSSDGIVRVFSANPDR  229 (557)
Q Consensus       208 ~g~-l~sg~~Dg~I~iwd~~~~~  229 (557)
                      +++ |++|+.||.|+||++.++.
T Consensus       317 dg~~l~sgs~Dg~v~iW~~~tGt  339 (340)
T 4aow_A          317 DGQTLFAGYTDNLVRVWQVTIGT  339 (340)
T ss_dssp             TSSEEEEEETTSCEEEEEEEC--
T ss_pred             CCCEEEEEeCCCEEEEEeCCCcC
Confidence            998 8999999999999998764

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=99.97  E-value=1.5e-28  Score=254.78  Aligned_cols=269  Identities=16%  Similarity=0.214  Sum_probs=216.2

Q ss_pred             EEEeccCcccEEEEEEcC-CCc-EEEEECCCcEEEEcCCC-----------------------------CCCCC-CCCEE
Q psy7057           5 STALYGHSMDVRSLSVTP-DGC-ILSASRDKSAKLWKPND-----------------------------LSPGA-KVNTL   52 (557)
Q Consensus         5 ~~~l~gH~~~V~~l~~sp-dg~-l~sgs~Dg~V~iWd~~~-----------------------------~~~~~-~~~~l   52 (557)
                      ...+.+|.+.|++++|+| ++. |++|+.||+|++||+.+                             +.+.+ ++.+|
T Consensus        36 ~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l  115 (408)
T 4a11_B           36 RDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMF  115 (408)
T ss_dssp             EEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCE
T ss_pred             eeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEE
Confidence            467889999999999999 888 88999999999999875                             33455 66799


Q ss_pred             EEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCC---C-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEE
Q psy7057          53 LSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLAN---G-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAV  127 (557)
Q Consensus        53 ~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~---~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~  127 (557)
                      ++++.|+.|++||+.+++....+. +...+.++.+.+.   + .+++++.|+.|++|| .++..+..+.+|...|.+++|
T Consensus       116 ~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~  194 (408)
T 4a11_B          116 TSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSW  194 (408)
T ss_dssp             EEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEE
T ss_pred             EEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEE
Confidence            999999999999999999888876 7888999999984   3 899999999999999 557778899999999999999


Q ss_pred             eCCCe--EEEEECCCeEEEEECCCCe-EEEEE---------------eCCCCcEEEEEE--cCCEEEEEeCCCeEEEEEC
Q psy7057         128 LNDTD--FVSCSNDASIRVWDSTTGK-CVHTM---------------YGHPNFIYSVAA--HGDLITSGGEDQCVCVYQN  187 (557)
Q Consensus       128 ~~~~~--lvs~s~Dg~I~vwd~~~~~-~~~~~---------------~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~  187 (557)
                      +|++.  |++++.|+.|++||++++. ++..+               ..|...|.++++  ++.+|++++.|+.|++||+
T Consensus       195 ~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~  274 (408)
T 4a11_B          195 SPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNS  274 (408)
T ss_dssp             CSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred             CCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEEC
Confidence            99975  7799999999999998765 44444               568899999999  6779999999999999997


Q ss_pred             CCCceEee---C------CccEEEEEEcCCCcEEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEE
Q psy7057         188 KAQNSFMI---P------AMSVWAVAILPNSDIVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVK  258 (557)
Q Consensus       188 ~~~~~~~~---~------~~~v~~v~~~p~g~l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs  258 (557)
                      .+......   +      ......+...+...+++++.|+.|++|++.+++...  ....|...+..+.+.+... .+++
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~--~~~~~~~~v~~~~~s~~~~-~l~s  351 (408)
T 4a11_B          275 SNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQIT--MLKGHYKTVDCCVFQSNFQ-ELYS  351 (408)
T ss_dssp             TTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEE--EECCCSSCEEEEEEETTTT-EEEE
T ss_pred             CCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCccee--eeccCCCeEEEEEEcCCCC-EEEE
Confidence            76522111   1      111222222333448899999999999998876543  3345778889998887655 5889


Q ss_pred             EeCCCcEEEEecCCChhhH
Q psy7057         259 VSDDGIVRVFSANPDRQAE  277 (557)
Q Consensus       259 ~s~DG~IrvW~~~~~~~~~  277 (557)
                      ++.||.|++|++...+...
T Consensus       352 ~~~dg~i~iw~~~~~~~~~  370 (408)
T 4a11_B          352 GSRDCNILAWVPSLYEPVP  370 (408)
T ss_dssp             EETTSCEEEEEECC-----
T ss_pred             ECCCCeEEEEeCCCCCccC
Confidence            9999999999999876543

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=99.97  E-value=3.3e-29  Score=252.66  Aligned_cols=226  Identities=19%  Similarity=0.244  Sum_probs=192.5

Q ss_pred             EEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC--------------------CCCCC--CCCEEEEEECCCeE
Q psy7057           5 STALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND--------------------LSPGA--KVNTLLSASWDMTA   61 (557)
Q Consensus         5 ~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~--------------------~~~~~--~~~~l~sgs~Dg~i   61 (557)
                      .+.+.+|.+.|++++|+|++. |++|+.||+|++||+..                    +++++  ++.+|++|+.|++|
T Consensus         4 ~~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v   83 (351)
T 3f3f_A            4 QPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTV   83 (351)
T ss_dssp             CCEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCE
T ss_pred             cccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeE
Confidence            456889999999999999998 89999999999999874                    55666  58999999999999


Q ss_pred             EEEECCCC---------eEEEEEcccCCcEEEEEEcCC--C-EEEEEECCCeEEEEeC-CCcEEEEE-------------
Q psy7057          62 KLWCLESQ---------QCKLTIRQHEMAVWGVIQLAN--G-IIVTGCADKTIKLHSE-EGEFLKTL-------------  115 (557)
Q Consensus        62 ~iwd~~~~---------~~~~~l~~h~~~V~~l~~~~~--~-~l~sgs~dg~I~vwd~-~~~~~~~l-------------  115 (557)
                      ++||+.++         +++..+..|...|.+++|+|+  + .+++++.|+.|++||. +++.+..+             
T Consensus        84 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~  163 (351)
T 3f3f_A           84 KLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPP  163 (351)
T ss_dssp             EEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCC
T ss_pred             EEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccccccccccc
Confidence            99999887         678889999999999999997  7 8999999999999993 33322211             


Q ss_pred             eCCCCCEEEEEEeCC---Ce-EEEEECCCeEEEEECCCCeE--EEEEeCCCCcEEEEEE--cC----CEEEEEeCCCeEE
Q psy7057         116 TGHTDCVRGLAVLND---TD-FVSCSNDASIRVWDSTTGKC--VHTMYGHPNFIYSVAA--HG----DLITSGGEDQCVC  183 (557)
Q Consensus       116 ~~h~~~V~~l~~~~~---~~-lvs~s~Dg~I~vwd~~~~~~--~~~~~~h~~~V~~l~~--~~----~~l~s~s~Dg~I~  183 (557)
                      ..|...+.+++|+|+   +. +++++.|+.+.+|+...++.  +..+.+|...|.+++|  ++    .+|++++.|+.|+
T Consensus       164 ~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~  243 (351)
T 3f3f_A          164 ANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIR  243 (351)
T ss_dssp             SSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEE
T ss_pred             CCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEE
Confidence            267889999999996   44 77999999999998877765  7778899999999999  44    5899999999999


Q ss_pred             EEECCCC-------------------------------------------------ceEeeCCccEEEEEEcCCCc-EEE
Q psy7057         184 VYQNKAQ-------------------------------------------------NSFMIPAMSVWAVAILPNSD-IVT  213 (557)
Q Consensus       184 iwd~~~~-------------------------------------------------~~~~~~~~~v~~v~~~p~g~-l~s  213 (557)
                      +||++..                                                 ..+..|...|++++|+|+++ |++
T Consensus       244 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s  323 (351)
T 3f3f_A          244 IFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSS  323 (351)
T ss_dssp             EEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEE
T ss_pred             EEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEE
Confidence            9996531                                                 33456788999999999998 999


Q ss_pred             EEcCCcEEEEecCCCCc
Q psy7057         214 GSSDGIVRVFSANPDRQ  230 (557)
Q Consensus       214 g~~Dg~I~iwd~~~~~~  230 (557)
                      ++.||.|++|++..+..
T Consensus       324 ~~~dg~v~iw~~~~~~~  340 (351)
T 3f3f_A          324 AGDDGKVRLWKATYSNE  340 (351)
T ss_dssp             EETTSCEEEEEECTTSC
T ss_pred             ecCCCcEEEEecCcCcc
Confidence            99999999999987643

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=99.97  E-value=3.2e-28  Score=243.04  Aligned_cols=225  Identities=34%  Similarity=0.556  Sum_probs=201.0

Q ss_pred             EEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC-------------------CCCCCCCCEEEEEECCCeEE
Q psy7057           3 KLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND-------------------LSPGAKVNTLLSASWDMTAK   62 (557)
Q Consensus         3 kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~-------------------~~~~~~~~~l~sgs~Dg~i~   62 (557)
                      ++...+..|...|++++|+|++. |++++.|+.|++|++..                   +.+  +++.+++++.|+.|+
T Consensus        50 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~  127 (313)
T 3odt_A           50 WLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAK  127 (313)
T ss_dssp             EEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEE
T ss_pred             EEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEE
Confidence            45677889999999999999998 88999999999999865                   222  467999999999999


Q ss_pred             EEECCCCeEEEEEcccCCcEEEEEEcC-CC-EEEEEECCCeEEEEeCCCcEEEEEeC-CCCCEEEEEEeCCCeEEEEECC
Q psy7057          63 LWCLESQQCKLTIRQHEMAVWGVIQLA-NG-IIVTGCADKTIKLHSEEGEFLKTLTG-HTDCVRGLAVLNDTDFVSCSND  139 (557)
Q Consensus        63 iwd~~~~~~~~~l~~h~~~V~~l~~~~-~~-~l~sgs~dg~I~vwd~~~~~~~~l~~-h~~~V~~l~~~~~~~lvs~s~D  139 (557)
                      +||  .++....+..|...+.++++.| ++ .+++++.|+.|++|| .......+.. |...|.+++++|++.+++++.|
T Consensus       128 ~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d  204 (313)
T 3odt_A          128 VWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ-NDKVIKTFSGIHNDVVRHLAVVDDGHFISCSND  204 (313)
T ss_dssp             EEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE-TTEEEEEECSSCSSCEEEEEEEETTEEEEEETT
T ss_pred             EEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEe-cCceEEEEeccCcccEEEEEEcCCCeEEEccCC
Confidence            999  6788889999999999999988 55 999999999999999 5566777776 9999999999999999999999


Q ss_pred             CeEEEEECCCCeEEEEEeCCCCcEEEEEEcCC-EEEEEeCCCeEEEEECCCC---ceEeeCCccEEEEEEcCCCcEEEEE
Q psy7057         140 ASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGD-LITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVAILPNSDIVTGS  215 (557)
Q Consensus       140 g~I~vwd~~~~~~~~~~~~h~~~V~~l~~~~~-~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p~g~l~sg~  215 (557)
                      +.|++||+++++++..+.+|...|.++++.++ .|++++.|+.|++||+.+.   ..+..|...|.+++|+|++++++++
T Consensus       205 g~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  284 (313)
T 3odt_A          205 GLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNGDIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGDIIVGS  284 (313)
T ss_dssp             SEEEEEETTTCCEEEEEECCSSCEEEEEECTTSCEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSCEEEEE
T ss_pred             CeEEEEECCchhhhhhhhcCCceEEEEEEecCCCEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCCEEEEe
Confidence            99999999999999999999999999999322 6999999999999997765   5667788899999999999999999


Q ss_pred             cCCcEEEEecCCCCcch
Q psy7057         216 SDGIVRVFSANPDRQAE  232 (557)
Q Consensus       216 ~Dg~I~iwd~~~~~~~~  232 (557)
                      .||.|++|++.+.+...
T Consensus       285 ~dg~i~iw~~~~~~~~~  301 (313)
T 3odt_A          285 SDNLVRIFSQEKSRWAS  301 (313)
T ss_dssp             TTSCEEEEESCGGGCCC
T ss_pred             CCCcEEEEeCCCCceee
Confidence            99999999998766543

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=99.97  E-value=6.1e-29  Score=249.04  Aligned_cols=229  Identities=16%  Similarity=0.165  Sum_probs=187.8

Q ss_pred             CCCCCCCCEEEEEECCCeEEEEECCC--CeEEEEEcccCCcEEEEEEcCC--C-EEEEEECCCeEEEEeCC-C--cEEEE
Q psy7057          43 LSPGAKVNTLLSASWDMTAKLWCLES--QQCKLTIRQHEMAVWGVIQLAN--G-IIVTGCADKTIKLHSEE-G--EFLKT  114 (557)
Q Consensus        43 ~~~~~~~~~l~sgs~Dg~i~iwd~~~--~~~~~~l~~h~~~V~~l~~~~~--~-~l~sgs~dg~I~vwd~~-~--~~~~~  114 (557)
                      +++++++++|++|+.|++|+||++.+  .+++.++.+|...|++++|+++  + .|++|+.|++|++||.. +  ..+..
T Consensus        15 ~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~   94 (297)
T 2pm7_B           15 AVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAV   94 (297)
T ss_dssp             EEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEE
T ss_pred             EEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEE
Confidence            34667899999999999999999974  3677899999999999999863  4 99999999999999954 3  35677


Q ss_pred             EeCCCCCEEEEEEeCC--C-eEEEEECCCeEEEEECCCCe--EEEEEeCCCCcEEEEEEcC---------------CEEE
Q psy7057         115 LTGHTDCVRGLAVLND--T-DFVSCSNDASIRVWDSTTGK--CVHTMYGHPNFIYSVAAHG---------------DLIT  174 (557)
Q Consensus       115 l~~h~~~V~~l~~~~~--~-~lvs~s~Dg~I~vwd~~~~~--~~~~~~~h~~~V~~l~~~~---------------~~l~  174 (557)
                      +.+|...|.+++|+|+  + .|++++.|++|++||++++.  ....+.+|...|.+++|.+               ++|+
T Consensus        95 ~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~  174 (297)
T 2pm7_B           95 HAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFV  174 (297)
T ss_dssp             ECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEE
T ss_pred             eecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEE
Confidence            8899999999999996  4 47899999999999998763  2456789999999999943               5899


Q ss_pred             EEeCCCeEEEEECCCC-------ceEeeCCccEEEEEEcCCC---c-EEEEEcCCcEEEEecCCCCcc---hhHHHhccc
Q psy7057         175 SGGEDQCVCVYQNKAQ-------NSFMIPAMSVWAVAILPNS---D-IVTGSSDGIVRVFSANPDRQA---EDAVQAQYA  240 (557)
Q Consensus       175 s~s~Dg~I~iwd~~~~-------~~~~~~~~~v~~v~~~p~g---~-l~sg~~Dg~I~iwd~~~~~~~---~~~~~~~~~  240 (557)
                      +|+.|++|++||++..       ..+..|...|++++|+|++   . |++++.|++|+||+++.....   .......+.
T Consensus       175 sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~  254 (297)
T 2pm7_B          175 TGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFP  254 (297)
T ss_dssp             EEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCS
T ss_pred             EEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCC
Confidence            9999999999996542       3566789999999999985   5 899999999999998764311   111113456


Q ss_pred             ceeEEEeccCCCceeEEEEeCCCcEEEEecCC
Q psy7057         241 EEVKKLKSANEQEIGGVKVSDDGIVRVFSANP  272 (557)
Q Consensus       241 ~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~  272 (557)
                      ..+..+.+.+... .+++++.||+|+||+...
T Consensus       255 ~~v~~~~~s~~g~-~las~~~D~~v~lw~~~~  285 (297)
T 2pm7_B          255 DVLWRASWSLSGN-VLALSGGDNKVTLWKENL  285 (297)
T ss_dssp             SCEEEEEECSSSC-CEEEEETTSCEEEEEECT
T ss_pred             CcEEEEEECCCCC-EEEEEcCCCcEEEEEECC
Confidence            7788888877654 589999999999999764

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=99.97  E-value=4.8e-28  Score=242.60  Aligned_cols=253  Identities=17%  Similarity=0.243  Sum_probs=209.8

Q ss_pred             EEEEEEcCCCcEEEEECCCcEEEEcCCC------------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEc
Q psy7057          15 VRSLSVTPDGCILSASRDKSAKLWKPND------------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIR   76 (557)
Q Consensus        15 V~~l~~spdg~l~sgs~Dg~V~iWd~~~------------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~   76 (557)
                      +++|+||+++.|+ ++.|++|+|||+.+                  +.+++++++|++|+.|++|++|++++++++..+.
T Consensus        28 ~~~l~WS~~~~lA-vg~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~  106 (318)
T 4ggc_A           28 LNLVDWSSGNVLA-VALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMT  106 (318)
T ss_dssp             CBCEEECTTSEEE-EEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred             ceEEEECCCCEEE-EEeCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEec
Confidence            5789999987454 45699999999876                  5678889999999999999999999999999999


Q ss_pred             ccCCcEEEEEEcCCCEEEEEECCCeEEEEeC--CCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEEEEECCCCe--
Q psy7057          77 QHEMAVWGVIQLANGIIVTGCADKTIKLHSE--EGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGK--  151 (557)
Q Consensus        77 ~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~--~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~--  151 (557)
                      +|...+.++.+.+ ..+++|+.++.+++|+.  ....+..+.+|...+.++.+.+++. +++++.|++|++||+++++  
T Consensus       107 ~h~~~~~~~~~~~-~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~  185 (318)
T 4ggc_A          107 SHSARVGSLSWNS-YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGG  185 (318)
T ss_dssp             CCSSCEEEEEEET-TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTB
T ss_pred             CccceEEEeecCC-CEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCccc
Confidence            9999998876643 38999999999999993  4466788899999999999999876 7799999999999998764  


Q ss_pred             --EEEEEeCCCCcEEEEEE---cCCE--EEEEeCCCeEEEEECCCC--ceEeeCCccEEEEEEcCCCc-EEEEE--cCCc
Q psy7057         152 --CVHTMYGHPNFIYSVAA---HGDL--ITSGGEDQCVCVYQNKAQ--NSFMIPAMSVWAVAILPNSD-IVTGS--SDGI  219 (557)
Q Consensus       152 --~~~~~~~h~~~V~~l~~---~~~~--l~s~s~Dg~I~iwd~~~~--~~~~~~~~~v~~v~~~p~g~-l~sg~--~Dg~  219 (557)
                        .......|...|.++.+   .+..  +++++.+++|++|+....  .....+...+..++++|++. +++++  .|+.
T Consensus       186 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~  265 (318)
T 4ggc_A          186 WVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQ  265 (318)
T ss_dssp             SCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCC
T ss_pred             ccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCCCE
Confidence              34556678889999998   3333  346678899999997766  44556777899999999988 55443  7999


Q ss_pred             EEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCC
Q psy7057         220 VRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANP  272 (557)
Q Consensus       220 I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~  272 (557)
                      |+|||+.+++...  ...+|...|..+.+.++.. .++|+|.||+||||++.+
T Consensus       266 i~iwd~~~~~~~~--~l~gH~~~V~~l~~spdg~-~l~S~s~D~~v~iWd~~~  315 (318)
T 4ggc_A          266 LVIWKYPTMAKVA--ELKGHTSRVLSLTMSPDGA-TVASAAADETLRLWRCFE  315 (318)
T ss_dssp             EEEEETTTCCEEE--EECCCSSCEEEEEECTTSS-CEEEEETTTEEEEECCSC
T ss_pred             EEEEECCCCcEEE--EEcCCCCCEEEEEEcCCCC-EEEEEecCCeEEEEECCC
Confidence            9999999877653  3456888999999887655 589999999999999864

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=99.97  E-value=1.2e-28  Score=249.95  Aligned_cols=259  Identities=12%  Similarity=0.104  Sum_probs=214.2

Q ss_pred             EEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC-------------------CCCCCCCC-EEEEEECCCeE
Q psy7057           3 KLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND-------------------LSPGAKVN-TLLSASWDMTA   61 (557)
Q Consensus         3 kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~-------------------~~~~~~~~-~l~sgs~Dg~i   61 (557)
                      +......+|.+.|++++|+|++. |++++.|+.|++|++..                   +.+++++. +|++|+.|+.|
T Consensus         2 ~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i   81 (342)
T 1yfq_A            2 QIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEI   81 (342)
T ss_dssp             EEEECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCE
T ss_pred             cceecccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeE
Confidence            45556679999999999999988 88999999999999764                   56777899 99999999999


Q ss_pred             EEEEC-CCCeEEEEEcc--cCCcEEEEEEcCCCEEEEEECCCeEEEEeC-C---------CcEEEEEeCCCCCEEEEEEe
Q psy7057          62 KLWCL-ESQQCKLTIRQ--HEMAVWGVIQLANGIIVTGCADKTIKLHSE-E---------GEFLKTLTGHTDCVRGLAVL  128 (557)
Q Consensus        62 ~iwd~-~~~~~~~~l~~--h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~-~---------~~~~~~l~~h~~~V~~l~~~  128 (557)
                      ++|++ .+++. ..+.+  |...|.+++|+|...+++++.|+.|++||. .         ++++..+. |...|.+++++
T Consensus        82 ~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~  159 (342)
T 1yfq_A           82 LKVDLIGSPSF-QALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTN  159 (342)
T ss_dssp             EEECSSSSSSE-EECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEEC
T ss_pred             EEEEeccCCce-EeccccCCCCceEEEEeCCCCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEec
Confidence            99999 87755 77888  999999999999449999999999999993 3         44444555 88999999999


Q ss_pred             CCCeEEEEECCCeEEEEECCC-Ce--EEEEEeCCCCcEEEEEEc---CCEEEEEeCCCeEEEEECCC--------C-ceE
Q psy7057         129 NDTDFVSCSNDASIRVWDSTT-GK--CVHTMYGHPNFIYSVAAH---GDLITSGGEDQCVCVYQNKA--------Q-NSF  193 (557)
Q Consensus       129 ~~~~lvs~s~Dg~I~vwd~~~-~~--~~~~~~~h~~~V~~l~~~---~~~l~s~s~Dg~I~iwd~~~--------~-~~~  193 (557)
                      |++ +++++.|+.|++||+++ +.  .......|...+.++++.   ++++++++.|+.|++|+...        . ..+
T Consensus       160 ~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~  238 (342)
T 1yfq_A          160 SSR-LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAF  238 (342)
T ss_dssp             SSE-EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEE
T ss_pred             CCc-EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceee
Confidence            887 99999999999999988 54  334455788999999994   57999999999999999532        2 566


Q ss_pred             eeCCc---------cEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHhcc-cceeEEEeccCCCceeEEEEeCC
Q psy7057         194 MIPAM---------SVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQY-AEEVKKLKSANEQEIGGVKVSDD  262 (557)
Q Consensus       194 ~~~~~---------~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~-~~~v~~l~~~~~~~~~~vs~s~D  262 (557)
                      ..|..         .|.+++|+|++. |++++.||.|++||+.+++....  ...+ ...+..+.   .+...+++++.|
T Consensus       239 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~--~~~~h~~~v~~~~---~~~~~l~s~s~D  313 (342)
T 1yfq_A          239 RCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKN--FAKFNEDSVVKIA---CSDNILCLATSD  313 (342)
T ss_dssp             ECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEE--CCCCSSSEEEEEE---ECSSEEEEEEEC
T ss_pred             ecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhh--hhcccCCCceEec---CCCCeEEEEecC
Confidence            66654         999999999998 99999999999999987765432  3345 67788777   445568999999


Q ss_pred             Cc-EEEEe
Q psy7057         263 GI-VRVFS  269 (557)
Q Consensus       263 G~-IrvW~  269 (557)
                      |. .+.|.
T Consensus       314 g~~~~~~~  321 (342)
T 1yfq_A          314 DTFKTNAA  321 (342)
T ss_dssp             THHHHCSS
T ss_pred             Cccccccc
Confidence            98 55444

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=99.97  E-value=7.6e-29  Score=261.16  Aligned_cols=265  Identities=12%  Similarity=0.190  Sum_probs=205.7

Q ss_pred             cEEEEEecc------CcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC--------------------------------
Q psy7057           2 YKLSTALYG------HSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND--------------------------------   42 (557)
Q Consensus         2 ~kl~~~l~g------H~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~--------------------------------   42 (557)
                      |++.+.+..      |.+.|++++|+|+|. |++|+.||.|+||++.+                                
T Consensus        12 w~~~q~~~~~~~~~~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~   91 (447)
T 3dw8_B           12 WCFSQVKGAVDDDVAEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLE   91 (447)
T ss_dssp             CEEEECCSCSSSCCCGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEE
T ss_pred             EEEEEecccccccccccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEeccccccccccccccccc
Confidence            555555543      678999999999998 88999999999999652                                


Q ss_pred             -------CCCCCCC--CEEEEEECCCeEEEEECCCCeEE---------------------------------------EE
Q psy7057          43 -------LSPGAKV--NTLLSASWDMTAKLWCLESQQCK---------------------------------------LT   74 (557)
Q Consensus        43 -------~~~~~~~--~~l~sgs~Dg~i~iwd~~~~~~~---------------------------------------~~   74 (557)
                             +.+++++  ..|++++.|++|++|++.++...                                       ..
T Consensus        92 ~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (447)
T 3dw8_B           92 IEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRI  171 (447)
T ss_dssp             ECCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEE
T ss_pred             ccCceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEE
Confidence                   3455666  79999999999999998764432                                       12


Q ss_pred             -EcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCC--CcEEE-------EEeCCCCCEEEEEEeCCC-e-EEEEECCCe
Q psy7057          75 -IRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEE--GEFLK-------TLTGHTDCVRGLAVLNDT-D-FVSCSNDAS  141 (557)
Q Consensus        75 -l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~--~~~~~-------~l~~h~~~V~~l~~~~~~-~-lvs~s~Dg~  141 (557)
                       +.+|...|.+++|+|++ .|++| .|+.|++||..  +..+.       .+.+|...|++++|+|++ . |++++.|++
T Consensus       172 ~~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~  250 (447)
T 3dw8_B          172 FANAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGT  250 (447)
T ss_dssp             ECSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSC
T ss_pred             eccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCe
Confidence             36799999999999998 88887 89999999965  33343       255899999999999986 4 789999999


Q ss_pred             EEEEECCCCeE----EEEEeCCCC------------cEEEEEE--cCCEEEEEeCCCeEEEEECCC-C---ceEeeCCcc
Q psy7057         142 IRVWDSTTGKC----VHTMYGHPN------------FIYSVAA--HGDLITSGGEDQCVCVYQNKA-Q---NSFMIPAMS  199 (557)
Q Consensus       142 I~vwd~~~~~~----~~~~~~h~~------------~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~-~---~~~~~~~~~  199 (557)
                      |++||+++++.    +..+..|..            .|.+++|  ++.+|++++. +.|++||++. .   ..+..|...
T Consensus       251 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~  329 (447)
T 3dw8_B          251 IRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYL  329 (447)
T ss_dssp             EEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGG
T ss_pred             EEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccc
Confidence            99999999886    788888876            8999999  6779999999 9999999865 3   556666431


Q ss_pred             ---------------EEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHH----------------------------
Q psy7057         200 ---------------VWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAV----------------------------  235 (557)
Q Consensus       200 ---------------v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~----------------------------  235 (557)
                                     +..++|+|++. |++|+.||.|++||+.+++......                            
T Consensus       330 ~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  409 (447)
T 3dw8_B          330 RSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEIS  409 (447)
T ss_dssp             TTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEE
T ss_pred             cccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCccccccc
Confidence                           33499999998 8999999999999998765432110                            


Q ss_pred             --HhcccceeEEEeccCCCceeEEEEeCCCcEEEEec
Q psy7057         236 --QAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSA  270 (557)
Q Consensus       236 --~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~  270 (557)
                        ...+...+..+.+.+... .+++++.|+ +.+|..
T Consensus       410 ~~~~~~~~~i~~~~~~p~~~-~la~~~~~~-~~~~~~  444 (447)
T 3dw8_B          410 VDSLDFNKKILHTAWHPKEN-IIAVATTNN-LYIFQD  444 (447)
T ss_dssp             GGGCCTTSCCCEEEECSSSS-EEEEECSSC-EEEEEC
T ss_pred             ccccccCCceeEEEECCCCC-EEEEEecce-eeeecc
Confidence              112344567777777665 456666665 777753

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=99.96  E-value=2.5e-28  Score=250.34  Aligned_cols=226  Identities=15%  Similarity=0.227  Sum_probs=195.3

Q ss_pred             cEEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC------------------CCCCCCCCEEEEEECCCeEE
Q psy7057           2 YKLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND------------------LSPGAKVNTLLSASWDMTAK   62 (557)
Q Consensus         2 ~kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~------------------~~~~~~~~~l~sgs~Dg~i~   62 (557)
                      ++....+.+|...|++++|+|++. |++++.||.|++||+.+                  +.+++++.+|++++.|+.|+
T Consensus        42 ~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~  121 (372)
T 1k8k_C           42 WVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVIS  121 (372)
T ss_dssp             EEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEE
T ss_pred             EEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEE
Confidence            347888999999999999999998 88999999999999755                  56778899999999999999


Q ss_pred             EEECCCCe---EEEE-EcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeC-------------------CCcEEEEEeCC
Q psy7057          63 LWCLESQQ---CKLT-IRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSE-------------------EGEFLKTLTGH  118 (557)
Q Consensus        63 iwd~~~~~---~~~~-l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~-------------------~~~~~~~l~~h  118 (557)
                      +|++..+.   .... ..+|...|.+++|+|++ .|++++.|+.|++||.                   .+.++..+.+|
T Consensus       122 i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (372)
T 1k8k_C          122 ICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSS  201 (372)
T ss_dssp             EEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCC
T ss_pred             EEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCC
Confidence            99998875   2333 36789999999999988 9999999999999994                   36788888899


Q ss_pred             CCCEEEEEEeCCCe-EEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCC--C---
Q psy7057         119 TDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKA--Q---  190 (557)
Q Consensus       119 ~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~--~---  190 (557)
                      ...|.+++|+|++. |++++.|+.|++||+++++++..+..|...|.++++  ++.+++++ .|+.|++|++..  .   
T Consensus       202 ~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~  280 (372)
T 1k8k_C          202 CGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLS  280 (372)
T ss_dssp             SSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEE
T ss_pred             CCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEE
Confidence            99999999999975 779999999999999999999999999999999999  45555555 999999999765  1   


Q ss_pred             --------------------------------------ceE-eeCCccEEEEEEc-CCC---c-EEEEEcCCcEEEEecC
Q psy7057         191 --------------------------------------NSF-MIPAMSVWAVAIL-PNS---D-IVTGSSDGIVRVFSAN  226 (557)
Q Consensus       191 --------------------------------------~~~-~~~~~~v~~v~~~-p~g---~-l~sg~~Dg~I~iwd~~  226 (557)
                                                            ..+ ..|...|++++|+ +++   . |++|+.||.|++|++.
T Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~  360 (372)
T 1k8k_C          281 FGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVR  360 (372)
T ss_dssp             ECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHH
T ss_pred             EeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEec
Confidence                                                  112 3788899999966 665   5 9999999999999986


Q ss_pred             CC
Q psy7057         227 PD  228 (557)
Q Consensus       227 ~~  228 (557)
                      +.
T Consensus       361 ~~  362 (372)
T 1k8k_C          361 SL  362 (372)
T ss_dssp             HH
T ss_pred             Ch
Confidence            53

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=99.96  E-value=1e-27  Score=262.55  Aligned_cols=266  Identities=19%  Similarity=0.258  Sum_probs=208.4

Q ss_pred             cEEEEEeccCcc---cEEEEEEcCC-Cc-EEEEECCCcEEEEcCCC--------------------CCCCCCCCEEEEEE
Q psy7057           2 YKLSTALYGHSM---DVRSLSVTPD-GC-ILSASRDKSAKLWKPND--------------------LSPGAKVNTLLSAS   56 (557)
Q Consensus         2 ~kl~~~l~gH~~---~V~~l~~spd-g~-l~sgs~Dg~V~iWd~~~--------------------~~~~~~~~~l~sgs   56 (557)
                      .++...+.+|..   .|++++|+|+ +. |++++.|+.|++||+.+                    +.++ ++.+|++++
T Consensus       193 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~  271 (615)
T 1pgu_A          193 FKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVG  271 (615)
T ss_dssp             BEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEE
T ss_pred             cceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEc
Confidence            467788999999   9999999999 88 88999999999999765                    2233 678999999


Q ss_pred             CCCeEEEEECCCCeEEEEEccc----CCcEEEEEEcCCCEEEEEECCCeEEEEeC-CCcEEEEEeCCCCCEEEEEE----
Q psy7057          57 WDMTAKLWCLESQQCKLTIRQH----EMAVWGVIQLANGIIVTGCADKTIKLHSE-EGEFLKTLTGHTDCVRGLAV----  127 (557)
Q Consensus        57 ~Dg~i~iwd~~~~~~~~~l~~h----~~~V~~l~~~~~~~l~sgs~dg~I~vwd~-~~~~~~~l~~h~~~V~~l~~----  127 (557)
                      .|+.|++||+.+++.+..+..+    ...+.++.+.....+++++.|+.|++||. +++++..+.+|...|.++++    
T Consensus       272 ~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~  351 (615)
T 1pgu_A          272 ADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLI  351 (615)
T ss_dssp             TTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTE
T ss_pred             CCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcE
Confidence            9999999999999998888776    46788888874558999999999999984 35566666666555554444    


Q ss_pred             -----------------------------eCCCeEEEEE-----------------------------------------
Q psy7057         128 -----------------------------LNDTDFVSCS-----------------------------------------  137 (557)
Q Consensus       128 -----------------------------~~~~~lvs~s-----------------------------------------  137 (557)
                                                   .+...+++++                                         
T Consensus       352 ~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~  431 (615)
T 1pgu_A          352 SGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLI  431 (615)
T ss_dssp             EEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEE
T ss_pred             EECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEE
Confidence                                         2122233444                                         


Q ss_pred             --------------------------------C-CCeEEEEECCCCeEE-EEEeCCCCcEEEEEE--cCCEEEEEeCCCe
Q psy7057         138 --------------------------------N-DASIRVWDSTTGKCV-HTMYGHPNFIYSVAA--HGDLITSGGEDQC  181 (557)
Q Consensus       138 --------------------------------~-Dg~I~vwd~~~~~~~-~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~  181 (557)
                                                      . |+.|++||+.+++.. ..+.+|...|.++++  ++++|++++.|+.
T Consensus       432 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~  511 (615)
T 1pgu_A          432 LQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGK  511 (615)
T ss_dssp             EETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred             EeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCe
Confidence                                            4 555555555444433 455678899999999  7789999999999


Q ss_pred             EEEEECCCCc---eEee-CCccEEEEEEcC----------CCc-EEEEEcCCcEEEEecCCC-CcchhHHHhcccceeEE
Q psy7057         182 VCVYQNKAQN---SFMI-PAMSVWAVAILP----------NSD-IVTGSSDGIVRVFSANPD-RQAEDAVQAQYAEEVKK  245 (557)
Q Consensus       182 I~iwd~~~~~---~~~~-~~~~v~~v~~~p----------~g~-l~sg~~Dg~I~iwd~~~~-~~~~~~~~~~~~~~v~~  245 (557)
                      |++|++.+..   .+.. |...|++++|+|          +++ |++++.||.|++|++.+. +..  .....|...+..
T Consensus       512 i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~--~~~~~h~~~v~~  589 (615)
T 1pgu_A          512 ILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKII--KALNAHKDGVNN  589 (615)
T ss_dssp             EEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCE--EETTSSTTCEEE
T ss_pred             EEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceec--hhhhcCccceEE
Confidence            9999987763   3344 888999999999          888 889999999999999876 332  234567788999


Q ss_pred             EeccCCCceeEEEEeCCCcEEEEecCC
Q psy7057         246 LKSANEQEIGGVKVSDDGIVRVFSANP  272 (557)
Q Consensus       246 l~~~~~~~~~~vs~s~DG~IrvW~~~~  272 (557)
                      +.+.+...  +++++.||.|++|+++.
T Consensus       590 l~~s~~~~--l~s~~~d~~v~iw~~~~  614 (615)
T 1pgu_A          590 LLWETPST--LVSSGADACIKRWNVVL  614 (615)
T ss_dssp             EEEEETTE--EEEEETTSCEEEEEEC-
T ss_pred             EEEcCCCC--eEEecCCceEEEEeeec
Confidence            99888776  89999999999999875

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=99.96  E-value=1.4e-27  Score=274.50  Aligned_cols=215  Identities=10%  Similarity=0.046  Sum_probs=177.8

Q ss_pred             EeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC---------------CCCCCCCCEEEEEECCCeEEEEECCCCe
Q psy7057           7 ALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND---------------LSPGAKVNTLLSASWDMTAKLWCLESQQ   70 (557)
Q Consensus         7 ~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~---------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~   70 (557)
                      ...||.+.|++++|+|+++ ||+|+.||+|+||+...               +.+++ +.+|++++.|++|++||+.+++
T Consensus        12 ~~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~   90 (902)
T 2oaj_A           12 NKYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQK   90 (902)
T ss_dssp             EEEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCS
T ss_pred             cccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCc
Confidence            3468999999999999998 88999999999999865               55666 7799999999999999999999


Q ss_pred             EEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcEEE------------EEeCCCCCEEEEEEeCC--CeEEE
Q psy7057          71 CKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFLK------------TLTGHTDCVRGLAVLND--TDFVS  135 (557)
Q Consensus        71 ~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~~------------~l~~h~~~V~~l~~~~~--~~lvs  135 (557)
                      ++.++. |...|++++|+|++ .+++|+.||+|++||.......            .+.+|...|++++|+|+  +.+++
T Consensus        91 ~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~  169 (902)
T 2oaj_A           91 VLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLI  169 (902)
T ss_dssp             EEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEE
T ss_pred             EEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEE
Confidence            988886 77899999999998 9999999999999996554432            23679999999999997  35889


Q ss_pred             EECCCeEEEEECCCCeEEEEEeCC------------------CCcEEEEEE--cCCEEEEEeCCCeEEEEECCCCceEe-
Q psy7057         136 CSNDASIRVWDSTTGKCVHTMYGH------------------PNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQNSFM-  194 (557)
Q Consensus       136 ~s~Dg~I~vwd~~~~~~~~~~~~h------------------~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~~~~~-  194 (557)
                      |+.|++| +||+++++++..+..|                  ...|.+++|  ++.+|++++.|++|++||.++.+.+. 
T Consensus       170 g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~  248 (902)
T 2oaj_A          170 SYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMA  248 (902)
T ss_dssp             ECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEE
T ss_pred             EeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEE
Confidence            9999999 9999999999998766                  477999999  77899999999999999987664332 


Q ss_pred             -------eC-------------CccEEEEEEc----CCC-c-EEEEEcC-----CcEEEEe
Q psy7057         195 -------IP-------------AMSVWAVAIL----PNS-D-IVTGSSD-----GIVRVFS  224 (557)
Q Consensus       195 -------~~-------------~~~v~~v~~~----p~g-~-l~sg~~D-----g~I~iwd  224 (557)
                             .|             ...|++++|+    |++ . +++|+.|     ..+++|+
T Consensus       249 r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~  309 (902)
T 2oaj_A          249 RTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMID  309 (902)
T ss_dssp             ECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEE
T ss_pred             EeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEe
Confidence                   12             3468999995    443 3 5555554     2566665

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=99.96  E-value=5.7e-29  Score=295.90  Aligned_cols=270  Identities=18%  Similarity=0.251  Sum_probs=235.4

Q ss_pred             EEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC---------------------------------------
Q psy7057           3 KLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND---------------------------------------   42 (557)
Q Consensus         3 kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~---------------------------------------   42 (557)
                      +....+.+|.+.|++++|+|++. |++++.|++|++|++..                                       
T Consensus       873 ~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  952 (1249)
T 3sfz_A          873 LKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGK  952 (1249)
T ss_dssp             EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEES
T ss_pred             ceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecC
Confidence            45678899999999999999998 89999999999998531                                       


Q ss_pred             --------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeC
Q psy7057          43 --------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSE  107 (557)
Q Consensus        43 --------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~  107 (557)
                                    +++++++.++++|+.+|.|++|++.+++....+.+|...|.+++|+|++ .+++++.|+.|++||.
T Consensus       953 ~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~ 1032 (1249)
T 3sfz_A          953 TGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNW 1032 (1249)
T ss_dssp             SCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEET
T ss_pred             cceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEEC
Confidence                          4567889999999999999999999999999999999999999999998 8999999999999996


Q ss_pred             CCcEEEEEeCCCCCEEEEEEeCCCeEEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEE
Q psy7057         108 EGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVY  185 (557)
Q Consensus       108 ~~~~~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iw  185 (557)
                      .......+..|...|.++++++++.+++++.|++|++||+.+++++..+.+|...|.++++  ++..+++++.|++|++|
T Consensus      1033 ~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iw 1112 (1249)
T 3sfz_A         1033 QTGDYVFLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIW 1112 (1249)
T ss_dssp             TTTEEECCBCCSSCEEEEEECSSSEEEEEESSSEEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCSSCCCEE
T ss_pred             CCCceEEEecCCCcEEEEEEcCCCcEEEEECCCcEEEEECCCCceeEEEcccCCcEEEEEECCCCCEEEEEcCCCcEEEE
Confidence            6655556778999999999999999999999999999999999999999999999999999  67799999999999999


Q ss_pred             ECCCC---ceEeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhH-------HHhcccceeEEEeccCCCce
Q psy7057         186 QNKAQ---NSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDA-------VQAQYAEEVKKLKSANEQEI  254 (557)
Q Consensus       186 d~~~~---~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~-------~~~~~~~~v~~l~~~~~~~~  254 (557)
                      |..+.   ..+..|...|++++|+|++. +++++.||.|++|++.+++.....       ....+...+..+.+.++...
T Consensus      1113 d~~~~~~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~ 1192 (1249)
T 3sfz_A         1113 SFDLLSPLHELKGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKT 1192 (1249)
T ss_dssp             CSSSSSCSBCCCCCSSCEEEEEECSSSSEEEEEETTSCCCEEESSSSCCCCCCCCCC-------CCSCCCEEEECTTSSC
T ss_pred             ECCCcceeeeeccCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEeccccccccccccCceEEEEEECCCCCE
Confidence            97654   66778899999999999998 889999999999999877654321       22456777888988887664


Q ss_pred             eEEEEeCCCcEEEEecCCChh
Q psy7057         255 GGVKVSDDGIVRVFSANPDRQ  275 (557)
Q Consensus       255 ~~vs~s~DG~IrvW~~~~~~~  275 (557)
                       +++++  |.|++|++..++.
T Consensus      1193 -l~s~~--g~v~vwd~~~g~~ 1210 (1249)
T 3sfz_A         1193 -LVSAG--GYLKWWNVATGDS 1210 (1249)
T ss_dssp             -EEEES--SSEEEBCSSSCBC
T ss_pred             -EEECC--CeEEEEECCCCce
Confidence             45554  9999999887644

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=99.96  E-value=5.2e-28  Score=264.93  Aligned_cols=259  Identities=15%  Similarity=0.177  Sum_probs=224.2

Q ss_pred             EEEEEeccCccc-EEEEEEcC--CCc-EEEEECCCcEEEEcCC--------C----------------CCCCCCCCEEEE
Q psy7057           3 KLSTALYGHSMD-VRSLSVTP--DGC-ILSASRDKSAKLWKPN--------D----------------LSPGAKVNTLLS   54 (557)
Q Consensus         3 kl~~~l~gH~~~-V~~l~~sp--dg~-l~sgs~Dg~V~iWd~~--------~----------------~~~~~~~~~l~s   54 (557)
                      +..+.+.+|.+. |++++|+|  +++ |++|+.||+|++||+.        .                +.+++++.+|++
T Consensus        54 ~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~  133 (615)
T 1pgu_A           54 PPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCV  133 (615)
T ss_dssp             CSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred             ccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEE
Confidence            467789999999 99999999  998 8899999999999994        1                677889999999


Q ss_pred             EECC----CeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEe-CCCcEEEEEeCCCC---CEEE
Q psy7057          55 ASWD----MTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHS-EEGEFLKTLTGHTD---CVRG  124 (557)
Q Consensus        55 gs~D----g~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~---~V~~  124 (557)
                      ++.+    +.|++||  .++.+..+.+|...|.+++|+|++  .+++++.|+.|++|| .+++++..+.+|..   .|++
T Consensus       134 ~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~  211 (615)
T 1pgu_A          134 VGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRD  211 (615)
T ss_dssp             EECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEE
T ss_pred             eccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEE
Confidence            9988    6888888  667888999999999999999988  799999999999999 56678889999999   9999


Q ss_pred             EEEeCC-Ce-EEEEECCCeEEEEECCCCeEEEEE-e---CCCCcEEEEEE-cCCEEEEEeCCCeEEEEECCCC---ceEe
Q psy7057         125 LAVLND-TD-FVSCSNDASIRVWDSTTGKCVHTM-Y---GHPNFIYSVAA-HGDLITSGGEDQCVCVYQNKAQ---NSFM  194 (557)
Q Consensus       125 l~~~~~-~~-lvs~s~Dg~I~vwd~~~~~~~~~~-~---~h~~~V~~l~~-~~~~l~s~s~Dg~I~iwd~~~~---~~~~  194 (557)
                      ++|+|+ +. +++++.|+.|++||+++++++..+ .   .|...|.++++ ++.+|++++.|+.|++||+.+.   ..+.
T Consensus       212 ~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~  291 (615)
T 1pgu_A          212 VEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWT  291 (615)
T ss_dssp             EEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred             EEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEcCCCEEEEEcCCCcEEEEECCCCcEEEEEc
Confidence            999999 76 779999999999999999999999 6   89999999999 7889999999999999998766   3444


Q ss_pred             eC----CccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEe
Q psy7057         195 IP----AMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFS  269 (557)
Q Consensus       195 ~~----~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~  269 (557)
                      .+    ...+.++.+. ++. +++++.|+.|++|++...+..  .....+...+..+.+ +.    +++++.||.|++|+
T Consensus       292 ~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~~~~~~--~~~~~~~~~v~~~~~-~~----l~~~~~dg~i~~w~  363 (615)
T 1pgu_A          292 LDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYELGHDEVL--KTISGHNKGITALTV-NP----LISGSYDGRIMEWS  363 (615)
T ss_dssp             CCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEETTEEEEE--EEECCCSSCEEEEET-TT----TEEEETTSCEEETT
T ss_pred             CCCCcccCceeEEEeC-CCCeEEEEECCCCEEEEECCCCcEE--EEEeCCCCCEEEEEe-cC----cEEECCCCeEEEEE
Confidence            44    3578888886 554 999999999999999875443  233457778888888 55    78999999999998


Q ss_pred             cC
Q psy7057         270 AN  271 (557)
Q Consensus       270 ~~  271 (557)
                      +.
T Consensus       364 ~~  365 (615)
T 1pgu_A          364 SS  365 (615)
T ss_dssp             TT
T ss_pred             ch
Confidence            76

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=99.96  E-value=7.6e-28  Score=269.58  Aligned_cols=222  Identities=23%  Similarity=0.312  Sum_probs=185.5

Q ss_pred             EEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEEC
Q psy7057           4 LSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCL   66 (557)
Q Consensus         4 l~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~   66 (557)
                      ..+.+.+|...|++++|+|+++ |++|+.|++|+|||+.+                +++++++.+|++|+.|++|++||+
T Consensus       422 ~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~  501 (694)
T 3dm0_A          422 AQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNT  501 (694)
T ss_dssp             EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECT
T ss_pred             ccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEC
Confidence            4567899999999999999998 88999999999999876                677888999999999999999998


Q ss_pred             CCCeEEEEE---cccCCcEEEEEEcCCC---EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEEC
Q psy7057          67 ESQQCKLTI---RQHEMAVWGVIQLANG---IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSN  138 (557)
Q Consensus        67 ~~~~~~~~l---~~h~~~V~~l~~~~~~---~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~  138 (557)
                      .........   .+|...|.|++|+|++   .+++|+.|++|++|| ..+++...+.+|...|++++|+|++. |++|+.
T Consensus       502 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~  581 (694)
T 3dm0_A          502 LGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGK  581 (694)
T ss_dssp             TSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred             CCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeC
Confidence            664433322   4688999999999975   799999999999999 45677889999999999999999976 679999


Q ss_pred             CCeEEEEECCCCeEEEEEeCCCCcEEEEEEcC-CEEEEEeCCCeEEEEECCCCceEe---eC------------------
Q psy7057         139 DASIRVWDSTTGKCVHTMYGHPNFIYSVAAHG-DLITSGGEDQCVCVYQNKAQNSFM---IP------------------  196 (557)
Q Consensus       139 Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~~~-~~l~s~s~Dg~I~iwd~~~~~~~~---~~------------------  196 (557)
                      |++|++||+++++++..+. +...|.+++|++ ..+++++.++.|++||+++...+.   .+                  
T Consensus       582 Dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  660 (694)
T 3dm0_A          582 DGVVLLWDLAEGKKLYSLE-ANSVIHALCFSPNRYWLCAATEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKR  660 (694)
T ss_dssp             TSBCEEEETTTTEEEECCB-CSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCCCC----------------
T ss_pred             CCeEEEEECCCCceEEEec-CCCcEEEEEEcCCCcEEEEEcCCCEEEEECCCCCChhhhccccccccccccccccccCCc
Confidence            9999999999999988876 456799999932 234445556779999987663221   11                  


Q ss_pred             -CccEEEEEEcCCCc-EEEEEcCCcEEEEecC
Q psy7057         197 -AMSVWAVAILPNSD-IVTGSSDGIVRVFSAN  226 (557)
Q Consensus       197 -~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~  226 (557)
                       ...+.+++|+|+++ |++|+.||+|+||++.
T Consensus       661 ~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~  692 (694)
T 3dm0_A          661 KVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG  692 (694)
T ss_dssp             CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred             eeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence             11378999999999 8999999999999985

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=99.96  E-value=2.8e-27  Score=241.28  Aligned_cols=263  Identities=18%  Similarity=0.159  Sum_probs=210.7

Q ss_pred             cEEEEEeccCcccEEEEEEcCC---Cc-EEEEECCCcEEEEcCCC------------------CCCCCCCCEEEEEECCC
Q psy7057           2 YKLSTALYGHSMDVRSLSVTPD---GC-ILSASRDKSAKLWKPND------------------LSPGAKVNTLLSASWDM   59 (557)
Q Consensus         2 ~kl~~~l~gH~~~V~~l~~spd---g~-l~sgs~Dg~V~iWd~~~------------------~~~~~~~~~l~sgs~Dg   59 (557)
                      ++..+.+.+|.+.|++++|+|+   |. |++|+.||.|++||+.+                  +.+++++.+|++++.|+
T Consensus        29 ~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg  108 (368)
T 3mmy_A           29 MKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDK  108 (368)
T ss_dssp             TCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTS
T ss_pred             cceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCC
Confidence            4556788999999999999999   46 89999999999999874                  67788999999999999


Q ss_pred             eEEEEECCCCeEEEEEcccCCcEEEEEE--cCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCeEEE
Q psy7057          60 TAKLWCLESQQCKLTIRQHEMAVWGVIQ--LANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTDFVS  135 (557)
Q Consensus        60 ~i~iwd~~~~~~~~~l~~h~~~V~~l~~--~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~lvs  135 (557)
                      +|++||+.+++.+. +..|...|.+++|  ++++ .|++++.|+.|++|| .+++++..+..|. .+.++.+.++ .+++
T Consensus       109 ~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~  185 (368)
T 3mmy_A          109 TAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE-RCYCADVIYP-MAVV  185 (368)
T ss_dssp             EEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSS-CEEEEEEETT-EEEE
T ss_pred             cEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCC-CceEEEecCC-eeEE
Confidence            99999999988766 5669999999999  8887 899999999999999 5677777887664 6777777654 5778


Q ss_pred             EECCCeEEEEECCCCeEEEEEe--CCCCcEEEEEE--cCC----EEEEEeCCCeEEEEECCCC------ceEeeCCc---
Q psy7057         136 CSNDASIRVWDSTTGKCVHTMY--GHPNFIYSVAA--HGD----LITSGGEDQCVCVYQNKAQ------NSFMIPAM---  198 (557)
Q Consensus       136 ~s~Dg~I~vwd~~~~~~~~~~~--~h~~~V~~l~~--~~~----~l~s~s~Dg~I~iwd~~~~------~~~~~~~~---  198 (557)
                      ++.++.+++|+++.........  .+...+.++++  +..    .+++++.|+.|++|++...      ..+..|..   
T Consensus       186 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~  265 (368)
T 3mmy_A          186 ATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGT  265 (368)
T ss_dssp             EEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC--
T ss_pred             EeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccc
Confidence            8899999999998765443332  23344444444  433    3999999999999997654      45556655   


Q ss_pred             ---------cEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEE
Q psy7057         199 ---------SVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVF  268 (557)
Q Consensus       199 ---------~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW  268 (557)
                               .|.+++|+|++. |++++.||.|++||+.+.+...  ....+...+..+.+.+... .+++++.|+..+.|
T Consensus       266 ~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~--~~~~~~~~v~~~~~s~~g~-~l~~~s~d~~~~~~  342 (368)
T 3mmy_A          266 NTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLK--TSEQLDQPISACCFNHNGN-IFAYASSYDWSKGH  342 (368)
T ss_dssp             --CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEE--ECCCCSSCEEEEEECTTSS-CEEEEECCCSTTCG
T ss_pred             cccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEE--EecCCCCCceEEEECCCCC-eEEEEecccccccc
Confidence                     699999999998 9999999999999999776543  2345677889998877655 58888888865555


Q ss_pred             ec
Q psy7057         269 SA  270 (557)
Q Consensus       269 ~~  270 (557)
                      ++
T Consensus       343 ~~  344 (368)
T 3mmy_A          343 EF  344 (368)
T ss_dssp             GG
T ss_pred             cc
Confidence            43

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=99.96  E-value=1.3e-27  Score=274.93  Aligned_cols=142  Identities=11%  Similarity=0.148  Sum_probs=123.2

Q ss_pred             cCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC---------------CCCCCCCCEEEEEECCCeEEEEECCCCeEE-
Q psy7057          10 GHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND---------------LSPGAKVNTLLSASWDMTAKLWCLESQQCK-   72 (557)
Q Consensus        10 gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~---------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~-   72 (557)
                      .|...|++|+|+| |+ |++++.|++|++||+.+               +.+++++++|++|+.||+|++||+.++++. 
T Consensus        56 ~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~  134 (902)
T 2oaj_A           56 EDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVFVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSS  134 (902)
T ss_dssp             SSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEE
T ss_pred             CCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEcCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCcccc
Confidence            4888999999999 77 99999999999999975               677889999999999999999999988764 


Q ss_pred             ----------EEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEe-CCCcEEEEEeCC------------------CCC
Q psy7057          73 ----------LTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHS-EEGEFLKTLTGH------------------TDC  121 (557)
Q Consensus        73 ----------~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd-~~~~~~~~l~~h------------------~~~  121 (557)
                                ..+.+|...|.+++|+|++  .+++|+.|++| +|| .+++++..+..|                  ...
T Consensus       135 ~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~  213 (902)
T 2oaj_A          135 FKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPK  213 (902)
T ss_dssp             EEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCC
T ss_pred             ceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCC
Confidence                      2235689999999999963  89999999999 999 456677777765                  577


Q ss_pred             EEEEEEeCCCe-EEEEECCCeEEEEECCCCeEE
Q psy7057         122 VRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCV  153 (557)
Q Consensus       122 V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~~  153 (557)
                      |++++|+|++. |++++.|++|++||+++++++
T Consensus       214 V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~  246 (902)
T 2oaj_A          214 VIQSLYHPNSLHIITIHEDNSLVFWDANSGHMI  246 (902)
T ss_dssp             EEEEEECTTSSEEEEEETTCCEEEEETTTCCEE
T ss_pred             eEEEEEcCCCCEEEEEECCCeEEEEECCCCcEE
Confidence            99999999976 779999999999999776554

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=99.96  E-value=2.3e-28  Score=249.40  Aligned_cols=215  Identities=15%  Similarity=0.160  Sum_probs=187.6

Q ss_pred             CcccEEEEEEcCC----Cc-EEEEECCCcEEEEcCCC----------------CCCCC-CCCEEEEEECCCeEEEEECCC
Q psy7057          11 HSMDVRSLSVTPD----GC-ILSASRDKSAKLWKPND----------------LSPGA-KVNTLLSASWDMTAKLWCLES   68 (557)
Q Consensus        11 H~~~V~~l~~spd----g~-l~sgs~Dg~V~iWd~~~----------------~~~~~-~~~~l~sgs~Dg~i~iwd~~~   68 (557)
                      |...|++++|+|+    +. |++|+.||.|++||+.+                +.+++ ++.+|++++.|++|++||+.+
T Consensus        68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~  147 (366)
T 3k26_A           68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQT  147 (366)
T ss_dssp             TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTT
T ss_pred             CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeec
Confidence            6688999999998    55 88999999999999886                66777 889999999999999999999


Q ss_pred             CeEEEEE---cccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCC-cEE----------------------------EEE
Q psy7057          69 QQCKLTI---RQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEG-EFL----------------------------KTL  115 (557)
Q Consensus        69 ~~~~~~l---~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~-~~~----------------------------~~l  115 (557)
                      ++.+..+   .+|...|.+++|+|++ .|++++.|+.|++||... +.+                            ...
T Consensus       148 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (366)
T 3k26_A          148 DTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTR  227 (366)
T ss_dssp             TEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEEC
T ss_pred             CeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccc
Confidence            9999988   7899999999999988 999999999999999542 222                            233


Q ss_pred             eCCCCCEEEEEEeCCCeEEEEECCCeEEEEECCCCe--------------EEEEEeCCCCcEEEEEE--c--CCEEEEEe
Q psy7057         116 TGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGK--------------CVHTMYGHPNFIYSVAA--H--GDLITSGG  177 (557)
Q Consensus       116 ~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~--------------~~~~~~~h~~~V~~l~~--~--~~~l~s~s  177 (557)
                      .+|...|.+++|+ ...+++++.|+.|++||+++++              .+..+..|...|.++++  +  +.+|++++
T Consensus       228 ~~~~~~v~~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~  306 (366)
T 3k26_A          228 DIHRNYVDCVRWL-GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGN  306 (366)
T ss_dssp             SSCSSCCCEEEEE-TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEEC
T ss_pred             cCCcceEEEEEEc-CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEe
Confidence            3499999999999 5568899999999999988764              47888899999999888  5  88999999


Q ss_pred             CCCeEEEEECCCC-------ceEeeC--CccEEEEEEcCCCc-EEEEEcCCcEEEEecC
Q psy7057         178 EDQCVCVYQNKAQ-------NSFMIP--AMSVWAVAILPNSD-IVTGSSDGIVRVFSAN  226 (557)
Q Consensus       178 ~Dg~I~iwd~~~~-------~~~~~~--~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~  226 (557)
                      .||.|++||+...       ..+..|  ...|++++|+|+++ |++++.||.|++||+.
T Consensus       307 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~  365 (366)
T 3k26_A          307 QVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL  365 (366)
T ss_dssp             TTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred             cCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence            9999999998764       256666  68999999999998 8899999999999985

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=99.96  E-value=1.1e-28  Score=249.42  Aligned_cols=228  Identities=18%  Similarity=0.190  Sum_probs=186.0

Q ss_pred             CCCCCCCCEEEEEECCCeEEEEECCCCe--EEEEEcccCCcEEEEEEcCC--C-EEEEEECCCeEEEEeCC-C--cEEEE
Q psy7057          43 LSPGAKVNTLLSASWDMTAKLWCLESQQ--CKLTIRQHEMAVWGVIQLAN--G-IIVTGCADKTIKLHSEE-G--EFLKT  114 (557)
Q Consensus        43 ~~~~~~~~~l~sgs~Dg~i~iwd~~~~~--~~~~l~~h~~~V~~l~~~~~--~-~l~sgs~dg~I~vwd~~-~--~~~~~  114 (557)
                      +++++++++|++|+.|++|+|||+.++.  ++..+.+|...|++++|++.  + .|++|+.|++|++||.. +  ..+..
T Consensus        19 v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~   98 (316)
T 3bg1_A           19 AQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHE   98 (316)
T ss_dssp             EEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEE
T ss_pred             eeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEE
Confidence            4566789999999999999999998875  56789999999999999862  4 99999999999999954 3  46778


Q ss_pred             EeCCCCCEEEEEEeCC--Ce-EEEEECCCeEEEEECCCCeE---EEEEeCCCCcEEEEEEcC------------------
Q psy7057         115 LTGHTDCVRGLAVLND--TD-FVSCSNDASIRVWDSTTGKC---VHTMYGHPNFIYSVAAHG------------------  170 (557)
Q Consensus       115 l~~h~~~V~~l~~~~~--~~-lvs~s~Dg~I~vwd~~~~~~---~~~~~~h~~~V~~l~~~~------------------  170 (557)
                      +.+|...|++++|+|+  +. |++|+.|++|++||++.+..   ...+.+|...|.+++|.+                  
T Consensus        99 ~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~  178 (316)
T 3bg1_A           99 HAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNY  178 (316)
T ss_dssp             ECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCC
T ss_pred             ccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccc
Confidence            8899999999999997  44 78999999999999987532   344568999999998832                  


Q ss_pred             -CEEEEEeCCCeEEEEECCCC------ceEeeCCccEEEEEEcCCC----c-EEEEEcCCcEEEEecCCCCc--chhHHH
Q psy7057         171 -DLITSGGEDQCVCVYQNKAQ------NSFMIPAMSVWAVAILPNS----D-IVTGSSDGIVRVFSANPDRQ--AEDAVQ  236 (557)
Q Consensus       171 -~~l~s~s~Dg~I~iwd~~~~------~~~~~~~~~v~~v~~~p~g----~-l~sg~~Dg~I~iwd~~~~~~--~~~~~~  236 (557)
                       .+|++|+.|++|++||.+..      ..+..|...|++++|+|++    . |++++.|++|++|++.....  ......
T Consensus       179 ~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~  258 (316)
T 3bg1_A          179 IKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLL  258 (316)
T ss_dssp             CCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEE
T ss_pred             cceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhh
Confidence             57999999999999997532      3456788999999999986    4 89999999999999876211  111122


Q ss_pred             hcccceeEEEeccCCCceeEEEEeCCCcEEEEecC
Q psy7057         237 AQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSAN  271 (557)
Q Consensus       237 ~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~  271 (557)
                      ..+...+..+.+.+... .+++++.||+|+||+..
T Consensus       259 ~~~~~~v~~v~~sp~g~-~las~~~D~~v~lw~~~  292 (316)
T 3bg1_A          259 HKFNDVVWHVSWSITAN-ILAVSGGDNKVTLWKES  292 (316)
T ss_dssp             EECSSCEEEEEECTTTC-CEEEEESSSCEEEEEEC
T ss_pred             hcCCCcEEEEEEcCCCC-EEEEEcCCCeEEEEEEC
Confidence            34667888888877654 58999999999999865

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=99.96  E-value=4.1e-28  Score=253.18  Aligned_cols=257  Identities=18%  Similarity=0.208  Sum_probs=209.4

Q ss_pred             cEEEEEEcCCCc--EEEEECCCcEEEEcCCC--------------------CCCCC-CCCEEEEEECCCeEEEEECCCC-
Q psy7057          14 DVRSLSVTPDGC--ILSASRDKSAKLWKPND--------------------LSPGA-KVNTLLSASWDMTAKLWCLESQ-   69 (557)
Q Consensus        14 ~V~~l~~spdg~--l~sgs~Dg~V~iWd~~~--------------------~~~~~-~~~~l~sgs~Dg~i~iwd~~~~-   69 (557)
                      ....++++|+..  +++++.||.|+||++..                    +.+++ ++.+|++|+.|++|++|++.++ 
T Consensus        36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~  115 (402)
T 2aq5_A           36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGG  115 (402)
T ss_dssp             SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTC
T ss_pred             CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCC
Confidence            445688898876  34689999999999744                    56677 8899999999999999999987 


Q ss_pred             ------eEEEEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEe-CCCcEEEEE--eCCCCCEEEEEEeCCCe-EEEEE
Q psy7057          70 ------QCKLTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHS-EEGEFLKTL--TGHTDCVRGLAVLNDTD-FVSCS  137 (557)
Q Consensus        70 ------~~~~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd-~~~~~~~~l--~~h~~~V~~l~~~~~~~-lvs~s  137 (557)
                            +++..+.+|...|.+++|+|++  .|++++.|+.|++|| .+++.+..+  .+|...|.+++|+|++. |++++
T Consensus       116 ~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  195 (402)
T 2aq5_A          116 LVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSC  195 (402)
T ss_dssp             CSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEE
T ss_pred             CccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEe
Confidence                  6678899999999999999986  899999999999999 567778888  78999999999999976 88999


Q ss_pred             CCCeEEEEECCCCeEEEEE-eCCCCc-EEEEEE--cCCEEEEE---eCCCeEEEEECCCCc----eEe-eCCccEEEEEE
Q psy7057         138 NDASIRVWDSTTGKCVHTM-YGHPNF-IYSVAA--HGDLITSG---GEDQCVCVYQNKAQN----SFM-IPAMSVWAVAI  205 (557)
Q Consensus       138 ~Dg~I~vwd~~~~~~~~~~-~~h~~~-V~~l~~--~~~~l~s~---s~Dg~I~iwd~~~~~----~~~-~~~~~v~~v~~  205 (557)
                      .|+.|++||+++++++..+ .+|... +.++.|  ++.+|++|   +.|+.|++||++...    ... .+...+.+++|
T Consensus       196 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~  275 (402)
T 2aq5_A          196 RDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFF  275 (402)
T ss_dssp             TTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEE
T ss_pred             cCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEE
Confidence            9999999999999999998 788775 888888  66678888   799999999976641    222 35678999999


Q ss_pred             cCCCc-EE-EEEcCCcEEEEecCCCCc-chhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCC
Q psy7057         206 LPNSD-IV-TGSSDGIVRVFSANPDRQ-AEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPD  273 (557)
Q Consensus       206 ~p~g~-l~-sg~~Dg~I~iwd~~~~~~-~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~  273 (557)
                      +|++. ++ +++.|+.|++|++.+... ........+...+..+.+.+....   .++.|+.+++|++.++
T Consensus       276 s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~---~~s~~~~~~~~~l~~~  343 (402)
T 2aq5_A          276 DPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGL---EVNKCEIARFYKLHER  343 (402)
T ss_dssp             ETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGS---CGGGTEEEEEEEEETT
T ss_pred             cCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEeccccc---ceecceeEEEEEcCCC
Confidence            99998 54 455799999999988763 211111124467778887776543   2357889999998764

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=99.96  E-value=1.1e-28  Score=254.43  Aligned_cols=221  Identities=12%  Similarity=0.180  Sum_probs=180.3

Q ss_pred             EEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC-------------------CCCCCCCCEEEEEECCCeEE
Q psy7057           3 KLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND-------------------LSPGAKVNTLLSASWDMTAK   62 (557)
Q Consensus         3 kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~-------------------~~~~~~~~~l~sgs~Dg~i~   62 (557)
                      ++...+.+|.+.|++++|+|+++ |++++.|++|++||+.+                   +.+++++.+|++++.|++|+
T Consensus        46 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~  125 (377)
T 3dwl_C           46 KHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVIS  125 (377)
T ss_dssp             EECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEE
T ss_pred             EEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEE
Confidence            56678899999999999999998 99999999999999764                   56778899999999999999


Q ss_pred             EEECCCCe---EEEEEcc-cCCcEEEEEEcCCC-EEEEEECCCeEEEEeCC-------------------CcEEEEEeCC
Q psy7057          63 LWCLESQQ---CKLTIRQ-HEMAVWGVIQLANG-IIVTGCADKTIKLHSEE-------------------GEFLKTLTGH  118 (557)
Q Consensus        63 iwd~~~~~---~~~~l~~-h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~-------------------~~~~~~l~~h  118 (557)
                      +||+++++   ....+.. |...|.+++|+|++ .|++++.|++|++||..                   +.++..+ +|
T Consensus       126 iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  204 (377)
T 3dwl_C          126 VCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PS  204 (377)
T ss_dssp             ECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CC
T ss_pred             EEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cC
Confidence            99999876   3677887 99999999999998 99999999999999953                   4456666 89


Q ss_pred             CCCEEEEEEeCCCe-EEEEECCCeEEEEECCCCeE----EEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCC-C
Q psy7057         119 TDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKC----VHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKA-Q  190 (557)
Q Consensus       119 ~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~----~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~-~  190 (557)
                      ...|.+++|+|++. |++++.|++|++||++++++    +..+.+|...|.+++|  ++.+|++++.++.+ +|+... .
T Consensus       205 ~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~  283 (377)
T 3dwl_C          205 GGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGNESG  283 (377)
T ss_dssp             SSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCCC--
T ss_pred             CceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeCCCc
Confidence            99999999999977 78999999999999999877    7888999999999999  66778888766666 665321 0


Q ss_pred             ----ce----------------------------------E----------------eeCCccEEEEEEcCCC-----cE
Q psy7057         191 ----NS----------------------------------F----------------MIPAMSVWAVAILPNS-----DI  211 (557)
Q Consensus       191 ----~~----------------------------------~----------------~~~~~~v~~v~~~p~g-----~l  211 (557)
                          ..                                  +                ..|...|.++++.+..     .|
T Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~  363 (377)
T 3dwl_C          284 WAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAF  363 (377)
T ss_dssp             -CCSBCCCSCCCCCCBSSSSSBCCCCCC-------------------------CCCSSSCSSCEEEEEEEEEETTEEEEE
T ss_pred             eEEEeeecccccccccccccccccccccccccccccccccccchhhccccccccccCccccceeEEEeccCCCCCceEEE
Confidence                00                                  0                1277889999977654     39


Q ss_pred             EEEEcCCcEEEEec
Q psy7057         212 VTGSSDGIVRVFSA  225 (557)
Q Consensus       212 ~sg~~Dg~I~iwd~  225 (557)
                      ++|+.||.|++|++
T Consensus       364 ~s~g~Dg~i~iWdl  377 (377)
T 3dwl_C          364 TSSGTDGRVVLWTL  377 (377)
T ss_dssp             EEEETTSEEEEECC
T ss_pred             EeecCCCcEEEecC
Confidence            99999999999985

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=99.96  E-value=1.1e-26  Score=244.11  Aligned_cols=223  Identities=17%  Similarity=0.264  Sum_probs=188.5

Q ss_pred             EeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC--------------CCCCCCCCEEEEEECCCeEEEEECCCC-e
Q psy7057           7 ALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND--------------LSPGAKVNTLLSASWDMTAKLWCLESQ-Q   70 (557)
Q Consensus         7 ~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~--------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~-~   70 (557)
                      .+.+|...|++|+|+|+|+ |++|+.||+|+|||+.+              .+...++..|++|+.|+.+++|+.... .
T Consensus       142 ~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~  221 (420)
T 4gga_A          142 QMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEH  221 (420)
T ss_dssp             ECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSC
T ss_pred             EecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccce
Confidence            3457888999999999998 89999999999999987              223345789999999999999998764 5


Q ss_pred             EEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCC-C----cEEEEEeCCCCCEEEEEEeCCCe--EEE--EECCC
Q psy7057          71 CKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEE-G----EFLKTLTGHTDCVRGLAVLNDTD--FVS--CSNDA  140 (557)
Q Consensus        71 ~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~-~----~~~~~l~~h~~~V~~l~~~~~~~--lvs--~s~Dg  140 (557)
                      .+.++.+|...++++.++|++ .+++++.|+.+++|+.. +    ..+.....|...|.+++|+|.+.  +++  |+.|+
T Consensus       222 ~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~  301 (420)
T 4gga_A          222 HVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDR  301 (420)
T ss_dssp             EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTC
T ss_pred             eeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCC
Confidence            678889999999999999988 99999999999999932 2    24567788999999999999743  443  45899


Q ss_pred             eEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEe--CCCeEEEEECCCC---ceEeeCCccEEEEEEcCCCc-EE
Q psy7057         141 SIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGG--EDQCVCVYQNKAQ---NSFMIPAMSVWAVAILPNSD-IV  212 (557)
Q Consensus       141 ~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s--~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p~g~-l~  212 (557)
                      +|++||+.+++++..+..| ..+.++.+  +++.+++++  .|+.|++||..+.   ..+.+|...|++++|+|+|. |+
T Consensus       302 ~I~iwd~~t~~~~~~~~~~-~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~  380 (420)
T 4gga_A          302 HIRIWNVCSGACLSAVDAH-SQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVA  380 (420)
T ss_dssp             EEEEEETTTTEEEEEEECS-SCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEE
T ss_pred             EEEEEeCCccccceeeccc-cceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEE
Confidence            9999999999999998865 45667777  667777655  7999999998766   66778999999999999998 99


Q ss_pred             EEEcCCcEEEEecCCCCc
Q psy7057         213 TGSSDGIVRVFSANPDRQ  230 (557)
Q Consensus       213 sg~~Dg~I~iwd~~~~~~  230 (557)
                      +|+.|++||||++....+
T Consensus       381 S~s~D~tvriWdv~~~~~  398 (420)
T 4gga_A          381 SAAADETLRLWRCFELDP  398 (420)
T ss_dssp             EEETTTEEEEECCSCSSC
T ss_pred             EEecCCeEEEEECCCCCc
Confidence            999999999999876544

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=99.96  E-value=6e-27  Score=244.51  Aligned_cols=224  Identities=18%  Similarity=0.201  Sum_probs=191.8

Q ss_pred             EEEecc-CcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEEC
Q psy7057           5 STALYG-HSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCL   66 (557)
Q Consensus         5 ~~~l~g-H~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~   66 (557)
                      ...+.. |...|++++|+|++. |++|+.||.|++||+.+                +.+  ++..|++|+.|+.|++||+
T Consensus       126 ~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~  203 (401)
T 4aez_A          126 SALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDV  203 (401)
T ss_dssp             EEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEET
T ss_pred             eEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEec
Confidence            344444 899999999999998 88999999999999876                333  4689999999999999999


Q ss_pred             C-CCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe--EEEEE--CC
Q psy7057          67 E-SQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD--FVSCS--ND  139 (557)
Q Consensus        67 ~-~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~--lvs~s--~D  139 (557)
                      . .......+.+|...|.+++|+|++ .|++|+.|+.|++|| .++.++..+..|...|.+++|+|++.  +++++  .|
T Consensus       204 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d  283 (401)
T 4aez_A          204 RIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMD  283 (401)
T ss_dssp             TSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTT
T ss_pred             ccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCC
Confidence            8 567788899999999999999988 999999999999999 45778888999999999999999753  44554  79


Q ss_pred             CeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEe--CCCeEEEEECCCC-----ceEeeCCccEEEEEEcCCCc
Q psy7057         140 ASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGG--EDQCVCVYQNKAQ-----NSFMIPAMSVWAVAILPNSD  210 (557)
Q Consensus       140 g~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s--~Dg~I~iwd~~~~-----~~~~~~~~~v~~v~~~p~g~  210 (557)
                      +.|++||+++++++..+. +...|.+++|  ++..+++++  .|+.|++|++...     ..+..|...|.+++|+|++.
T Consensus       284 ~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~  362 (401)
T 4aez_A          284 KQIHFWNAATGARVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGR  362 (401)
T ss_dssp             CEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSS
T ss_pred             CEEEEEECCCCCEEEEEe-CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCC
Confidence            999999999999998886 6778999999  677888854  8999999997663     33567888999999999998


Q ss_pred             -EEEEEcCCcEEEEecCCCCcc
Q psy7057         211 -IVTGSSDGIVRVFSANPDRQA  231 (557)
Q Consensus       211 -l~sg~~Dg~I~iwd~~~~~~~  231 (557)
                       +++++.||.|++|++.+++..
T Consensus       363 ~l~s~~~dg~i~iw~~~~~~~~  384 (401)
T 4aez_A          363 ILSTAASDENLKFWRVYDGDHV  384 (401)
T ss_dssp             EEEEECTTSEEEEEECCC----
T ss_pred             EEEEEeCCCcEEEEECCCCccc
Confidence             889999999999999877654

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=99.96  E-value=5.8e-28  Score=250.30  Aligned_cols=226  Identities=15%  Similarity=0.238  Sum_probs=195.5

Q ss_pred             EEEEEeccCcccEEEEEEcCC----C---c-EEEEECCCcEEEEcCCC--------------------------CCCC--
Q psy7057           3 KLSTALYGHSMDVRSLSVTPD----G---C-ILSASRDKSAKLWKPND--------------------------LSPG--   46 (557)
Q Consensus         3 kl~~~l~gH~~~V~~l~~spd----g---~-l~sgs~Dg~V~iWd~~~--------------------------~~~~--   46 (557)
                      ++...+.+|...|++++|+|+    +   . |++++.|+.|++|++.+                          +.++  
T Consensus        53 ~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  132 (397)
T 1sq9_A           53 DKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGAS  132 (397)
T ss_dssp             GGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECC
T ss_pred             CcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeec
Confidence            456788899999999999999    8   7 88999999999998542                          3445  


Q ss_pred             --CCCCE-EEEEECCCeEEEEECCC------CeEEE-----EE-------cccCCcEEEEEEcCCCEEEEEECCCeEEEE
Q psy7057          47 --AKVNT-LLSASWDMTAKLWCLES------QQCKL-----TI-------RQHEMAVWGVIQLANGIIVTGCADKTIKLH  105 (557)
Q Consensus        47 --~~~~~-l~sgs~Dg~i~iwd~~~------~~~~~-----~l-------~~h~~~V~~l~~~~~~~l~sgs~dg~I~vw  105 (557)
                        +++.. |++++.|+.|++||+.+      ++.+.     .+       ..|...|.+++|+|++.+++++.|+.|++|
T Consensus       133 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~  212 (397)
T 1sq9_A          133 NDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQIS  212 (397)
T ss_dssp             C----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEE
T ss_pred             cCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCceEEEEeCCCcEEEE
Confidence              78899 99999999999999988      55544     66       448999999999998888999999999999


Q ss_pred             e-CCCcEEEEEeC---C---CCCEEEEEEeCCCe-EEEEECC---CeEEEEECCCCeEEEEEeC-------------CCC
Q psy7057         106 S-EEGEFLKTLTG---H---TDCVRGLAVLNDTD-FVSCSND---ASIRVWDSTTGKCVHTMYG-------------HPN  161 (557)
Q Consensus       106 d-~~~~~~~~l~~---h---~~~V~~l~~~~~~~-lvs~s~D---g~I~vwd~~~~~~~~~~~~-------------h~~  161 (557)
                      | .+++++..+..   |   ...|.+++|+|++. |++++.|   +.|++||+++++++..+.+             |..
T Consensus       213 d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (397)
T 1sq9_A          213 ELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSS  292 (397)
T ss_dssp             ETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSS
T ss_pred             ECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCC
Confidence            9 45778888888   9   99999999999976 6799999   9999999999999999998             999


Q ss_pred             cEEEEEE--cCCEEEEEeCCCeEEEEECCCC---ceEe------eC---------------CccEEEEEEcCCC------
Q psy7057         162 FIYSVAA--HGDLITSGGEDQCVCVYQNKAQ---NSFM------IP---------------AMSVWAVAILPNS------  209 (557)
Q Consensus       162 ~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~---~~~~------~~---------------~~~v~~v~~~p~g------  209 (557)
                      .|.+++|  ++++|++++.|+.|++||+...   ..+.      .|               ...|++++|+|++      
T Consensus       293 ~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~  372 (397)
T 1sq9_A          293 WVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMG  372 (397)
T ss_dssp             CEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTT
T ss_pred             cEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEecccccccccc
Confidence            9999999  6789999999999999998766   5555      56               8899999999997      


Q ss_pred             ----c-EEEEEcCCcEEEEecCCC
Q psy7057         210 ----D-IVTGSSDGIVRVFSANPD  228 (557)
Q Consensus       210 ----~-l~sg~~Dg~I~iwd~~~~  228 (557)
                          . |++++.||.|++|++.++
T Consensus       373 ~~~~~~l~s~~~dg~i~iw~~~~g  396 (397)
T 1sq9_A          373 ADLNESLCCVCLDRSIRWFREAGG  396 (397)
T ss_dssp             CTTSCEEEEEETTTEEEEEEEEC-
T ss_pred             ccccceEEEecCCCcEEEEEcCCC
Confidence                5 899999999999998764

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=99.96  E-value=1.4e-26  Score=236.15  Aligned_cols=225  Identities=19%  Similarity=0.208  Sum_probs=199.7

Q ss_pred             EEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC---------------CCCCCCCCEEEEEECC-----CeE
Q psy7057           3 KLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND---------------LSPGAKVNTLLSASWD-----MTA   61 (557)
Q Consensus         3 kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~---------------~~~~~~~~~l~sgs~D-----g~i   61 (557)
                      +....+.+|.+.|++++|+|+++ |++++.||+|++||+.+               +.+++++.++++++.+     +.|
T Consensus        65 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i  144 (369)
T 3zwl_B           65 ERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSI  144 (369)
T ss_dssp             CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEE
T ss_pred             hhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEE
Confidence            46788999999999999999998 88999999999999876               6778899999999999     999


Q ss_pred             EEEECCCCe-----------EEEEEcccCC--cEEEEEEcCCC-EEEEEECCCeEEEEeCC--CcEEEEEeCCCCCEEEE
Q psy7057          62 KLWCLESQQ-----------CKLTIRQHEM--AVWGVIQLANG-IIVTGCADKTIKLHSEE--GEFLKTLTGHTDCVRGL  125 (557)
Q Consensus        62 ~iwd~~~~~-----------~~~~l~~h~~--~V~~l~~~~~~-~l~sgs~dg~I~vwd~~--~~~~~~l~~h~~~V~~l  125 (557)
                      ++|++....           ....+..|..  .+.+++|+|++ .+++++.|+.|++||..  ...+..+..|...|.++
T Consensus       145 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~  224 (369)
T 3zwl_B          145 NIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDM  224 (369)
T ss_dssp             EEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEE
T ss_pred             EEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEE
Confidence            999987653           3445556666  99999999988 99999999999999954  57888899999999999


Q ss_pred             EEeCCCe-EEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCC--------------eEEEEECC
Q psy7057         126 AVLNDTD-FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQ--------------CVCVYQNK  188 (557)
Q Consensus       126 ~~~~~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg--------------~I~iwd~~  188 (557)
                      +|+|++. |++++.|+.|++||+++++++..+. +...+.++++  ++.++++++.++              .+++||..
T Consensus       225 ~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~  303 (369)
T 3zwl_B          225 QFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKI  303 (369)
T ss_dssp             EECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETT
T ss_pred             EECCCCCEEEEecCCceEEEEECCCCceeeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecC
Confidence            9999976 7799999999999999999998887 7888999999  678999999888              89999976


Q ss_pred             CC---ceEeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCC
Q psy7057         189 AQ---NSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPD  228 (557)
Q Consensus       189 ~~---~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~  228 (557)
                      ..   ..+..|...|.+++|+|+++ |++++.||.|++|+++..
T Consensus       304 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~  347 (369)
T 3zwl_B          304 FEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEKS  347 (369)
T ss_dssp             TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEECHH
T ss_pred             CCcchhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEECccc
Confidence            65   56677899999999999998 889999999999999754

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=99.96  E-value=3.3e-27  Score=242.86  Aligned_cols=261  Identities=14%  Similarity=0.059  Sum_probs=189.7

Q ss_pred             EEEeccCcccEEEEEEcCCCcEEEEECCCcEEEEcCCC--------------CCCCCCCCEE-EEEECCCeEEEEECCCC
Q psy7057           5 STALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPND--------------LSPGAKVNTL-LSASWDMTAKLWCLESQ   69 (557)
Q Consensus         5 ~~~l~gH~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~--------------~~~~~~~~~l-~sgs~Dg~i~iwd~~~~   69 (557)
                      ...+.+|.+.|++++|+|||++++++.+..+++|++..              +.+.+..+.+ ++++.|++|++||+.++
T Consensus        12 ~~~~~~h~~~V~~v~fs~dg~~la~g~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~   91 (355)
T 3vu4_A           12 IVPENHVSNPVTDYEFNQDQSCLILSTLKSFEIYNVHPVAHIMSQEMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKK   91 (355)
T ss_dssp             -------CCCCCEEEECTTSSEEEEECSSEEEEEEETTEEEEEEEECSCCCEEEECTTSSEEEEECSSTTEEEEEETTTT
T ss_pred             ccccccCCCceEEEEECCCCCEEEEEcCCEEEEEecCCcceeeeeecCCeEEEEEcCCCCEEEEEECCccEEEEEECCCC
Confidence            34568899999999999999944444455689999776              2333445666 66788899999999999


Q ss_pred             eEEEEEcccCCcEEEEEEcCCCEEEEEECCCeEEEEeCCC--cEEEEEeCCCCCEEEEEEeCCCeEEE--EECCCeEEEE
Q psy7057          70 QCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEG--EFLKTLTGHTDCVRGLAVLNDTDFVS--CSNDASIRVW  145 (557)
Q Consensus        70 ~~~~~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~~~--~~~~~l~~h~~~V~~l~~~~~~~lvs--~s~Dg~I~vw  145 (557)
                      +++..+. |...|.+++++++..+++  .|+.|++||...  +.+..+..   ....+++++ ..++.  |+.||.|++|
T Consensus        92 ~~~~~~~-~~~~v~~v~~~~~~~~~~--~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~-~~la~~sg~~~g~v~iw  164 (355)
T 3vu4_A           92 QDVSRIK-VDAPVKDLFLSREFIVVS--YGDVISVFKFGNPWKRITDDIR---FGGVCEFSN-GLLVYSNEFNLGQIHIT  164 (355)
T ss_dssp             EEEEEEE-CSSCEEEEEECSSEEEEE--ETTEEEEEESSTTCCBSSCCEE---EEEEEEEET-TEEEEEESSCTTCEEEE
T ss_pred             cEEEEEE-CCCceEEEEEcCCEEEEE--EcCEEEEEECCCCceeeEEecc---CCceEEEEc-cEEEEeCCCcCcEEEEE
Confidence            9998887 677999999998764443  488999999543  34444443   444556666 55554  6899999999


Q ss_pred             ECCCCe----------------EEEEEeCCCCcEEEEEE--cCCEEEEEeCCCe-EEEEECCCC---ceEe-e-CCccEE
Q psy7057         146 DSTTGK----------------CVHTMYGHPNFIYSVAA--HGDLITSGGEDQC-VCVYQNKAQ---NSFM-I-PAMSVW  201 (557)
Q Consensus       146 d~~~~~----------------~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~-I~iwd~~~~---~~~~-~-~~~~v~  201 (557)
                      |+++++                ++..+.+|...|.+++|  ++.+|++|+.|++ |++||+++.   ..+. + |...|+
T Consensus       165 d~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~  244 (355)
T 3vu4_A          165 KLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVV  244 (355)
T ss_dssp             ECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEE
T ss_pred             ECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEE
Confidence            998765                27888999999999999  7789999999998 999998765   4555 3 888999


Q ss_pred             EEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHhc---------------------ccceeEEEeccCCCceeEEEE
Q psy7057         202 AVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQ---------------------YAEEVKKLKSANEQEIGGVKV  259 (557)
Q Consensus       202 ~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~---------------------~~~~v~~l~~~~~~~~~~vs~  259 (557)
                      +++|+|++. |++++.|++|++|++.............                     .......+.+.++ ...++++
T Consensus       245 ~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d-~~~l~~~  323 (355)
T 3vu4_A          245 DMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISE-SSLVVVW  323 (355)
T ss_dssp             EEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSS-SEEEEEE
T ss_pred             EEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCC-CCEEEEE
Confidence            999999998 8899999999999997653221111100                     0011133444444 4468889


Q ss_pred             eCCCcEEEEecCCC
Q psy7057         260 SDDGIVRVFSANPD  273 (557)
Q Consensus       260 s~DG~IrvW~~~~~  273 (557)
                      +.||.+++|++.++
T Consensus       324 ~~dg~~~~~~~~~~  337 (355)
T 3vu4_A          324 PHTRMIETFKVVFD  337 (355)
T ss_dssp             TTTTEEEEEEEEEE
T ss_pred             eCCCeEEEEEEEcC
Confidence            99999999997754

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=99.96  E-value=2e-27  Score=241.89  Aligned_cols=221  Identities=14%  Similarity=0.224  Sum_probs=185.1

Q ss_pred             ccCcccEEEEEEcCC---Cc-EEEEECCCcEEEEcCCC-----------------C------CCCCCCCEEEEEECCCeE
Q psy7057           9 YGHSMDVRSLSVTPD---GC-ILSASRDKSAKLWKPND-----------------L------SPGAKVNTLLSASWDMTA   61 (557)
Q Consensus         9 ~gH~~~V~~l~~spd---g~-l~sgs~Dg~V~iWd~~~-----------------~------~~~~~~~~l~sgs~Dg~i   61 (557)
                      .+|...|++++|+|+   +. |++|+.||.|++||+.+                 +      ++++++..|++++.|++|
T Consensus        62 ~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i  141 (357)
T 3i2n_A           62 IEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTV  141 (357)
T ss_dssp             EEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCE
T ss_pred             ecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeE
Confidence            379999999999998   46 99999999999999875                 2      567889999999999999


Q ss_pred             EEEECCCCe-EEEEEcccCC----cEEEEE----EcCCC-EEEEEECCCeEEEEeCCCcEEEEEeCCCCCEEEEEEeC--
Q psy7057          62 KLWCLESQQ-CKLTIRQHEM----AVWGVI----QLANG-IIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLN--  129 (557)
Q Consensus        62 ~iwd~~~~~-~~~~l~~h~~----~V~~l~----~~~~~-~l~sgs~dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~--  129 (557)
                      ++||+.+++ ++..+..|..    .+.+++    |++++ .+++++.|+.|++||...........|...|.+++|+|  
T Consensus       142 ~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~  221 (357)
T 3i2n_A          142 KVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKD  221 (357)
T ss_dssp             EEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSS
T ss_pred             EEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCC
Confidence            999999886 6777766654    899998    56777 99999999999999966655566677999999999998  


Q ss_pred             -CCe-EEEEECCCeEEEEECCCCeEEEEE-----eCCCCcEEEEEE--cCC-EEEEEeCCCeEEEEECCCC---------
Q psy7057         130 -DTD-FVSCSNDASIRVWDSTTGKCVHTM-----YGHPNFIYSVAA--HGD-LITSGGEDQCVCVYQNKAQ---------  190 (557)
Q Consensus       130 -~~~-lvs~s~Dg~I~vwd~~~~~~~~~~-----~~h~~~V~~l~~--~~~-~l~s~s~Dg~I~iwd~~~~---------  190 (557)
                       ++. +++++.|+.|++||+++++++..+     .+|...|.++++  ++. +|++++.|+.|++||++..         
T Consensus       222 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~  301 (357)
T 3i2n_A          222 ISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSE  301 (357)
T ss_dssp             SSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTT
T ss_pred             CCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCC
Confidence             655 779999999999999876644443     489999999999  344 7999999999999996531         


Q ss_pred             -------------ceEeeCCccEEEEEEcCCCc-EE-EEEcCCcEEEEecCCCC
Q psy7057         191 -------------NSFMIPAMSVWAVAILPNSD-IV-TGSSDGIVRVFSANPDR  229 (557)
Q Consensus       191 -------------~~~~~~~~~v~~v~~~p~g~-l~-sg~~Dg~I~iwd~~~~~  229 (557)
                                   ..+..|...|++++|+|+++ ++ +++.|+.|++|++....
T Consensus       302 g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~  355 (357)
T 3i2n_A          302 GIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLN  355 (357)
T ss_dssp             SCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC--
T ss_pred             CCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCcc
Confidence                         45667888999999999998 77 79999999999997643

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=99.96  E-value=1e-27  Score=271.17  Aligned_cols=225  Identities=15%  Similarity=0.219  Sum_probs=191.1

Q ss_pred             EEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC------------------CCCCCC--CCEEEEEECCCeEE
Q psy7057           4 LSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND------------------LSPGAK--VNTLLSASWDMTAK   62 (557)
Q Consensus         4 l~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~------------------~~~~~~--~~~l~sgs~Dg~i~   62 (557)
                      +...+.+|.+.|++++|+|++. |++|+.||+|++||+..                  +.++++  +++|++|+.||+|+
T Consensus         1 ~~~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~   80 (753)
T 3jro_A            1 MVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVL   80 (753)
T ss_dssp             -------CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEE
T ss_pred             CeeecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEE
Confidence            3567899999999999999998 99999999999999863                  455555  89999999999999


Q ss_pred             EEECCCCe--EEEEEcccCCcEEEEEEcCC--C-EEEEEECCCeEEEEeCCC---cEEEEEeCCCCCEEEEEEeCC----
Q psy7057          63 LWCLESQQ--CKLTIRQHEMAVWGVIQLAN--G-IIVTGCADKTIKLHSEEG---EFLKTLTGHTDCVRGLAVLND----  130 (557)
Q Consensus        63 iwd~~~~~--~~~~l~~h~~~V~~l~~~~~--~-~l~sgs~dg~I~vwd~~~---~~~~~l~~h~~~V~~l~~~~~----  130 (557)
                      +||+.+++  ....+.+|...|.+++|+|+  + .+++|+.||.|++||...   .....+.+|...|.+++|+|.    
T Consensus        81 vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~  160 (753)
T 3jro_A           81 IWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEE  160 (753)
T ss_dssp             EEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---
T ss_pred             EEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCccccc
Confidence            99999987  77888999999999999997  6 999999999999999533   245677889999999999993    


Q ss_pred             ---------C-eEEEEECCCeEEEEECCCC----eEEEEEeCCCCcEEEEEE--c---CCEEEEEeCCCeEEEEECCCC-
Q psy7057         131 ---------T-DFVSCSNDASIRVWDSTTG----KCVHTMYGHPNFIYSVAA--H---GDLITSGGEDQCVCVYQNKAQ-  190 (557)
Q Consensus       131 ---------~-~lvs~s~Dg~I~vwd~~~~----~~~~~~~~h~~~V~~l~~--~---~~~l~s~s~Dg~I~iwd~~~~-  190 (557)
                               + .+++|+.||+|++||++++    .+...+.+|...|.+++|  +   +.+|++++.||.|++||.... 
T Consensus       161 ~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~  240 (753)
T 3jro_A          161 DGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQ  240 (753)
T ss_dssp             ------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSS
T ss_pred             ccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCC
Confidence                     4 4889999999999999876    677788899999999999  4   678999999999999996553 


Q ss_pred             -------ceEeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCC
Q psy7057         191 -------NSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPD  228 (557)
Q Consensus       191 -------~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~  228 (557)
                             .....|...|++++|+|++. +++++.||.|++|++...
T Consensus       241 ~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~  286 (753)
T 3jro_A          241 GPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE  286 (753)
T ss_dssp             SCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSS
T ss_pred             CcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCC
Confidence                   22234677899999999998 999999999999999853

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=99.95  E-value=6.2e-27  Score=242.50  Aligned_cols=258  Identities=21%  Similarity=0.245  Sum_probs=181.7

Q ss_pred             ccCcccEEEEEEcC-CCc-EEEEECCCcEEEEcCCC------------------CCCCCCCCEEEEEECCCeEEEEECCC
Q psy7057           9 YGHSMDVRSLSVTP-DGC-ILSASRDKSAKLWKPND------------------LSPGAKVNTLLSASWDMTAKLWCLES   68 (557)
Q Consensus         9 ~gH~~~V~~l~~sp-dg~-l~sgs~Dg~V~iWd~~~------------------~~~~~~~~~l~sgs~Dg~i~iwd~~~   68 (557)
                      .+|...|++++|+| ++. |++++.||.|++||+.+                  ....+++.++++++.|+.|++||+.+
T Consensus        96 ~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~  175 (408)
T 4a11_B           96 DVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKS  175 (408)
T ss_dssp             TCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSS
T ss_pred             ccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCC
Confidence            36999999999999 555 89999999999999986                  22233566999999999999999999


Q ss_pred             CeEEEEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEeCC-C-cEEEEE---------------eCCCCCEEEEEEeC
Q psy7057          69 QQCKLTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHSEE-G-EFLKTL---------------TGHTDCVRGLAVLN  129 (557)
Q Consensus        69 ~~~~~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~~-~-~~~~~l---------------~~h~~~V~~l~~~~  129 (557)
                      ++.+..+..|...|.+++|+|++  ++++|+.|+.|++||.. + .++..+               ..|...|.+++|+|
T Consensus       176 ~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  255 (408)
T 4a11_B          176 GSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTS  255 (408)
T ss_dssp             SCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECT
T ss_pred             cceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcC
Confidence            99999999999999999999987  69999999999999943 2 244444               57889999999999


Q ss_pred             CCe-EEEEECCCeEEEEECCCCeEEEEEeCCC------CcEEEEEE-cCCEEEEEeCCCeEEEEECCCC---ceEeeCCc
Q psy7057         130 DTD-FVSCSNDASIRVWDSTTGKCVHTMYGHP------NFIYSVAA-HGDLITSGGEDQCVCVYQNKAQ---NSFMIPAM  198 (557)
Q Consensus       130 ~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h~------~~V~~l~~-~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~  198 (557)
                      ++. |++++.|+.|++||+++++....+..+.      .....+.. .+..+++++.++.|++||+.+.   ..+..|..
T Consensus       256 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~  335 (408)
T 4a11_B          256 DGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYK  335 (408)
T ss_dssp             TSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSS
T ss_pred             CCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCC
Confidence            976 7799999999999999887655443321      11122222 4456778888999999997766   56677889


Q ss_pred             cEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecC
Q psy7057         199 SVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSAN  271 (557)
Q Consensus       199 ~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~  271 (557)
                      .|.+++|+|++. |++++.||.|++|++.+.+..........     .....+.......+.+.|+.+++|+..
T Consensus       336 ~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~W~~~  404 (408)
T 4a11_B          336 TVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDDETTT-----KSQLNPAFEDAWSSSDEEGGTSAWSHP  404 (408)
T ss_dssp             CEEEEEEETTTTEEEEEETTSCEEEEEECC--------------------------------------------
T ss_pred             eEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCCCceEe-----ccccccccceeecccCccCceeecCCc
Confidence            999999999998 88999999999999998765432221111     111222233334677889999999754

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=99.95  E-value=1.6e-27  Score=246.28  Aligned_cols=221  Identities=13%  Similarity=0.136  Sum_probs=179.7

Q ss_pred             EEeccCcccEEEEEEcCCCcEE-----------EEECCCcEEEEcCCC-------------------------CCCCCCC
Q psy7057           6 TALYGHSMDVRSLSVTPDGCIL-----------SASRDKSAKLWKPND-------------------------LSPGAKV   49 (557)
Q Consensus         6 ~~l~gH~~~V~~l~~spdg~l~-----------sgs~Dg~V~iWd~~~-------------------------~~~~~~~   49 (557)
                      ..|.+|...|.+++++++ .++           +++.|+++|+|++..                         ++++|++
T Consensus        67 ~~l~~~~~~v~s~~~~~~-~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg  145 (365)
T 4h5i_A           67 FALEDNDDSPTAIDASKG-IILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREG  145 (365)
T ss_dssp             EECCTTSCCCCEEEEETT-EEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTS
T ss_pred             EEccCCCCceEEEEeCCC-EEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCC
Confidence            357889999999987654 133           345688999998643                         4578889


Q ss_pred             CEEEEEE--CCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcEEEE--EeCCCCCEEE
Q psy7057          50 NTLLSAS--WDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFLKT--LTGHTDCVRG  124 (557)
Q Consensus        50 ~~l~sgs--~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~~~--l~~h~~~V~~  124 (557)
                      .++++++  .|++|+|||+++++++..+. |...|.+++|+|++ ++++++.++.+.+|..++..+..  ...|...|++
T Consensus       146 ~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  224 (365)
T 4h5i_A          146 TVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIARKTDFDKNWSLSK  224 (365)
T ss_dssp             SCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCEEEEECCCCTTEEEEE
T ss_pred             CEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEeccceeEEEEEeccCcceeeeecCCCCCCEEE
Confidence            9877554  78999999999999998886 77889999999999 77777766655555566766543  4578899999


Q ss_pred             EEEeCCCe-EEEEECCC----eEEEEECCCCeE----EEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCCc--
Q psy7057         125 LAVLNDTD-FVSCSNDA----SIRVWDSTTGKC----VHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQN--  191 (557)
Q Consensus       125 l~~~~~~~-lvs~s~Dg----~I~vwd~~~~~~----~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~~--  191 (557)
                      ++|+|++. +++++.|+    .+++|++.....    ...+.+|...|++++|  ++++|++|+.|++|+|||+.+.+  
T Consensus       225 v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~  304 (365)
T 4h5i_A          225 INFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMS  304 (365)
T ss_dssp             EEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEE
T ss_pred             EEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEE
Confidence            99999987 66888777    688999876653    4567789999999999  78899999999999999988763  


Q ss_pred             -eE-eeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCC
Q psy7057         192 -SF-MIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPD  228 (557)
Q Consensus       192 -~~-~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~  228 (557)
                       .+ .+|...|++|+|+|+|+ |++|+.|++||||++...
T Consensus       305 ~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~  344 (365)
T 4h5i_A          305 KIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN  344 (365)
T ss_dssp             EEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred             EEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence             32 46889999999999999 999999999999999643

>3l3f_X Protein DOA1, DOA1/UFD3; armadillo-like repeat structure, nucleus, UBL conjugation PA protein binding; 1.90A {Saccharomyces cerevisiae}

Probab=99.95  E-value=3.3e-30  Score=258.05  Aligned_cols=67  Identities=45%  Similarity=0.789  Sum_probs=58.2

Q ss_pred             CCCCCCCCccceeeeeeeccCCCCCCCCCccCCCcccccccccccCCCceecccCCCCCcccccccCCChHHHHHhhhhc
Q psy7057         425 SKSKQGPTEYDFVFSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHLTSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHT  504 (557)
Q Consensus       425 ~~~~~~g~~yd~vf~vd~~~g~p~~klp~n~~~~p~~~a~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  504 (557)
                      .|..|+||||||||||||+||+||||||||++||||+|||+||                                   ++
T Consensus        23 ~k~~~~g~~yDyvf~vdi~~g~~~~klpyN~~~np~~~A~~F~-----------------------------------~~   67 (362)
T 3l3f_X           23 KKIEFEGKTYDYVFDVDIEDGKPPLKLPINVSDNPYTAADNFL-----------------------------------AR   67 (362)
T ss_dssp             CCEEETTEEESEEEEECCSTTSCCEEEEECTTSCHHHHHHHHH-----------------------------------HH
T ss_pred             CceeecCcccceEEEEEcCCCCccccCCCcCCCCHHHHHHHHH-----------------------------------HH
Confidence            4557899999999999999999999999988888887777655                                   55


Q ss_pred             CCCChHHHHHHHHHHHhcccCC
Q psy7057         505 HHLSQMFLEQVANFIMTNSKSK  526 (557)
Q Consensus       505 ~~l~~~~~~~v~~fi~~n~~~~  526 (557)
                      |+||++||||||+||++||+++
T Consensus        68 ~~l~~~y~~~i~~fi~~n~~~~   89 (362)
T 3l3f_X           68 YELPMSYRDQVVQFILKNTNGI   89 (362)
T ss_dssp             TTCCGGGHHHHHHHHHHHCC--
T ss_pred             cCCCHHHHHHHHHHHHhcCCCc
Confidence            7999999999999999999854

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=99.95  E-value=3.8e-27  Score=248.14  Aligned_cols=215  Identities=11%  Similarity=0.219  Sum_probs=184.4

Q ss_pred             cCcccEEEEEEcCCCc-EEEEECCCcEEEEcCC---C--------------CC----------------CCCCCCEEEEE
Q psy7057          10 GHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPN---D--------------LS----------------PGAKVNTLLSA   55 (557)
Q Consensus        10 gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~---~--------------~~----------------~~~~~~~l~sg   55 (557)
                      +|.+.|++++|+|++. |++|+.||+|++||+.   .              +.                +++++.+|++|
T Consensus       109 ~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  188 (437)
T 3gre_A          109 DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVAL  188 (437)
T ss_dssp             ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEE
T ss_pred             cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEE
Confidence            5999999999999988 8999999999999984   1              11                33568899999


Q ss_pred             ECCCeEEEEECCCCeEEEEEcc--cCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEe-CCCCCEEEEEEeC-
Q psy7057          56 SWDMTAKLWCLESQQCKLTIRQ--HEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLT-GHTDCVRGLAVLN-  129 (557)
Q Consensus        56 s~Dg~i~iwd~~~~~~~~~l~~--h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~-~h~~~V~~l~~~~-  129 (557)
                      +.|++|++||+.+++++..+.+  |...|++++|+|++ .|++|+.|++|++|| ..+.++..+. .|...|.+++++| 
T Consensus       189 ~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~  268 (437)
T 3gre_A          189 TNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQF  268 (437)
T ss_dssp             ETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTT
T ss_pred             eCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccc
Confidence            9999999999999999999988  89999999999998 999999999999999 5667778776 7888999997765 


Q ss_pred             ---CCe-EEEEECCCeEEEEECCCCeEEEEEeCC--------------------------CCcEEEEEE-cCCEEEEEeC
Q psy7057         130 ---DTD-FVSCSNDASIRVWDSTTGKCVHTMYGH--------------------------PNFIYSVAA-HGDLITSGGE  178 (557)
Q Consensus       130 ---~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h--------------------------~~~V~~l~~-~~~~l~s~s~  178 (557)
                         ++. +++++.|++|++||+++++++..+.+|                          ...|+++++ ++.+|++++.
T Consensus       269 ~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~  348 (437)
T 3gre_A          269 YGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVSNDKILLTDEA  348 (437)
T ss_dssp             TCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEETTEEEEEEGG
T ss_pred             cCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEECCceEEEecCC
Confidence               454 779999999999999999999888754                          445778888 5568999999


Q ss_pred             CCeEEEEECCCC---ceEee-------------------------------------CCccEEEEEEcCC--Cc-EEEEE
Q psy7057         179 DQCVCVYQNKAQ---NSFMI-------------------------------------PAMSVWAVAILPN--SD-IVTGS  215 (557)
Q Consensus       179 Dg~I~iwd~~~~---~~~~~-------------------------------------~~~~v~~v~~~p~--g~-l~sg~  215 (557)
                      |+.|++||+.+.   ..+..                                     |...|.+++++++  +. |++|+
T Consensus       349 d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~  428 (437)
T 3gre_A          349 TSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACD  428 (437)
T ss_dssp             GTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEE
T ss_pred             CCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEc
Confidence            999999997655   33333                                     7889999999998  55 88999


Q ss_pred             cCCcEEEEe
Q psy7057         216 SDGIVRVFS  224 (557)
Q Consensus       216 ~Dg~I~iwd  224 (557)
                      .||.|+||+
T Consensus       429 ~dG~I~iw~  437 (437)
T 3gre_A          429 NSGLIGIFQ  437 (437)
T ss_dssp             TTSCEEEEC
T ss_pred             CCceEEEeC
Confidence            999999995

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=99.95  E-value=6.6e-27  Score=246.93  Aligned_cols=220  Identities=26%  Similarity=0.386  Sum_probs=189.0

Q ss_pred             EEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEE
Q psy7057           3 KLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWC   65 (557)
Q Consensus         3 kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd   65 (557)
                      +....+.+|.+.|++++|  ++. |++|+.||+|++||+.+                +.+  .++.+++|+.|++|++||
T Consensus       164 ~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg~i~vwd  239 (435)
T 1p22_A          164 ECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRF--NNGMMVTCSKDRSIAVWD  239 (435)
T ss_dssp             CEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEEC--CTTEEEEEETTSCEEEEE
T ss_pred             eEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEE--cCCEEEEeeCCCcEEEEe
Confidence            467789999999999999  555 99999999999999876                333  367999999999999999


Q ss_pred             CCCCeEE---EEEcccCCcEEEEEEcCCCEEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCeEEEEECCCe
Q psy7057          66 LESQQCK---LTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDAS  141 (557)
Q Consensus        66 ~~~~~~~---~~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~  141 (557)
                      +.+++..   ..+.+|...|.++++ ....+++|+.|+.|++|| .+++++..+.+|...|.++.+. ...+++|+.|++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~g~~dg~  317 (435)
T 1p22_A          240 MASPTDITLRRVLVGHRAAVNVVDF-DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR-DRLVVSGSSDNT  317 (435)
T ss_dssp             CSSSSCCEEEEEECCCSSCEEEEEE-ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE-TTEEEEEETTSC
T ss_pred             CCCCCCceeeeEecCCCCcEEEEEe-CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeC-CCEEEEEeCCCe
Confidence            9887644   678899999999999 344999999999999999 5778899999999999999995 356889999999


Q ss_pred             EEEEECCCCeEEEEEeCCCCcEEEEEEcCCEEEEEeCCCeEEEEECCC-----------C-ceEeeCCccEEEEEEcCCC
Q psy7057         142 IRVWDSTTGKCVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKA-----------Q-NSFMIPAMSVWAVAILPNS  209 (557)
Q Consensus       142 I~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~-----------~-~~~~~~~~~v~~v~~~p~g  209 (557)
                      |++||+++++++.++.+|...|.++++++.+|++|+.||.|++||+..           . ..+..|...|.+++|  ++
T Consensus       318 i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~  395 (435)
T 1p22_A          318 IRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DE  395 (435)
T ss_dssp             EEEEETTTCCEEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CS
T ss_pred             EEEEECCCCCEEEEEeCCcCcEEEEEecCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CC
Confidence            999999999999999999999999999999999999999999999432           2 456778889999999  45


Q ss_pred             c-EEEEEcCCcEEEEecCCCCc
Q psy7057         210 D-IVTGSSDGIVRVFSANPDRQ  230 (557)
Q Consensus       210 ~-l~sg~~Dg~I~iwd~~~~~~  230 (557)
                      . +++++.||+|++|++.....
T Consensus       396 ~~l~s~s~Dg~i~iwd~~~~~~  417 (435)
T 1p22_A          396 FQIVSSSHDDTILIWDFLNDPA  417 (435)
T ss_dssp             SCEEECCSSSEEEEEC------
T ss_pred             CEEEEEeCCCEEEEEECCCCCC
Confidence            5 99999999999999987644

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=99.95  E-value=3.9e-27  Score=248.59  Aligned_cols=252  Identities=17%  Similarity=0.260  Sum_probs=200.8

Q ss_pred             EEeccCcccEEEEEEcCC-Cc-EEEEECCCcEEEEcCCCCCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEE
Q psy7057           6 TALYGHSMDVRSLSVTPD-GC-ILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVW   83 (557)
Q Consensus         6 ~~l~gH~~~V~~l~~spd-g~-l~sgs~Dg~V~iWd~~~~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~   83 (557)
                      ..+.+|.+.|++++|+|+ +. |++++.||.|++|++......+.        .        .....++..+.+|...|+
T Consensus       122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~--------~--------~~~~~~~~~~~~h~~~v~  185 (430)
T 2xyi_A          122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPE--------P--------SGECQPDLRLRGHQKEGY  185 (430)
T ss_dssp             EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCC--------T--------TCCCCCSEEEECCSSCCC
T ss_pred             EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccC--------c--------cccCCCcEEecCCCCCeE
Confidence            445679999999999997 44 66777788888887754211110        0        012456677889999999


Q ss_pred             EEEEcCCC--EEEEEECCCeEEEEeCCC-----cE---EEEEeCCCCCEEEEEEeCC-C-eEEEEECCCeEEEEECCCC-
Q psy7057          84 GVIQLANG--IIVTGCADKTIKLHSEEG-----EF---LKTLTGHTDCVRGLAVLND-T-DFVSCSNDASIRVWDSTTG-  150 (557)
Q Consensus        84 ~l~~~~~~--~l~sgs~dg~I~vwd~~~-----~~---~~~l~~h~~~V~~l~~~~~-~-~lvs~s~Dg~I~vwd~~~~-  150 (557)
                      +++|+|++  .|++|+.||.|++|+...     ..   ...+.+|...|.+++|+|. + .|++++.|+.|++||++++ 
T Consensus       186 ~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~  265 (430)
T 2xyi_A          186 GLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNN  265 (430)
T ss_dssp             CEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSC
T ss_pred             EEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCC
Confidence            99999976  899999999999999543     11   4567789999999999994 3 4779999999999999987 


Q ss_pred             --eEEEEEeCCCCcEEEEEE--cCC-EEEEEeCCCeEEEEECCCC----ceEeeCCccEEEEEEcCCCc--EEEEEcCCc
Q psy7057         151 --KCVHTMYGHPNFIYSVAA--HGD-LITSGGEDQCVCVYQNKAQ----NSFMIPAMSVWAVAILPNSD--IVTGSSDGI  219 (557)
Q Consensus       151 --~~~~~~~~h~~~V~~l~~--~~~-~l~s~s~Dg~I~iwd~~~~----~~~~~~~~~v~~v~~~p~g~--l~sg~~Dg~  219 (557)
                        +++..+..|...|++++|  ++. +|++|+.|+.|++||++..    ..+..|...|.+++|+|++.  |++++.|+.
T Consensus       266 ~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~  345 (430)
T 2xyi_A          266 TSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRR  345 (430)
T ss_dssp             SSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSC
T ss_pred             CCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCc
Confidence              577888899999999999  344 7999999999999997753    56777899999999999986  889999999


Q ss_pred             EEEEecCCCCc------------chhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCC
Q psy7057         220 VRVFSANPDRQ------------AEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPD  273 (557)
Q Consensus       220 I~iwd~~~~~~------------~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~  273 (557)
                      |+||++.....            ........|...+..+.+.+.....+++++.||.|+||++...
T Consensus       346 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~  411 (430)
T 2xyi_A          346 LHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN  411 (430)
T ss_dssp             CEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred             EEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence            99999976321            1122334566779999998888867899999999999998854

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=99.95  E-value=4.7e-26  Score=258.55  Aligned_cols=226  Identities=24%  Similarity=0.317  Sum_probs=200.3

Q ss_pred             EEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEE
Q psy7057           3 KLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWC   65 (557)
Q Consensus         3 kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd   65 (557)
                      +..+.+.+|.+.|++++|+|++. |++|+.||.|++||+.+                +.+++++.+|++++.|++|++|+
T Consensus        46 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~  125 (814)
T 3mkq_A           46 VEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWN  125 (814)
T ss_dssp             EEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEE
T ss_pred             ceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEE
Confidence            56788999999999999999998 89999999999999876                67888999999999999999999


Q ss_pred             CCCC-eEEEEEcccCCcEEEEEEcC-CC-EEEEEECCCeEEEEeC-CCcEEEEEeCCC-CCEEEEEEeC--CCe-EEEEE
Q psy7057          66 LESQ-QCKLTIRQHEMAVWGVIQLA-NG-IIVTGCADKTIKLHSE-EGEFLKTLTGHT-DCVRGLAVLN--DTD-FVSCS  137 (557)
Q Consensus        66 ~~~~-~~~~~l~~h~~~V~~l~~~~-~~-~l~sgs~dg~I~vwd~-~~~~~~~l~~h~-~~V~~l~~~~--~~~-lvs~s  137 (557)
                      +.++ .....+.+|...|.+++|+| ++ .+++++.|++|++||. .+.....+..+. ..+.+++|+|  ++. +++++
T Consensus       126 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~  205 (814)
T 3mkq_A          126 WENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITAS  205 (814)
T ss_dssp             GGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEEC
T ss_pred             CCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEe
Confidence            9887 77788999999999999999 66 9999999999999994 455566665544 8899999998  665 77999


Q ss_pred             CCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC---ceEeeCCccEEEEEEcCCCc--
Q psy7057         138 NDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVAILPNSD--  210 (557)
Q Consensus       138 ~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p~g~--  210 (557)
                      .|+.|++||+++++++.++.+|...|.++++  ++.+|++++.||.|++||..+.   ..+..+...+++++|+|++.  
T Consensus       206 ~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~  285 (814)
T 3mkq_A          206 DDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKN  285 (814)
T ss_dssp             TTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGG
T ss_pred             CCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCce
Confidence            9999999999999999999999999999999  6679999999999999998765   55667778999999999997  


Q ss_pred             EEEEEcCCcEEEEecCCC
Q psy7057         211 IVTGSSDGIVRVFSANPD  228 (557)
Q Consensus       211 l~sg~~Dg~I~iwd~~~~  228 (557)
                      +++++.++.+.+|++...
T Consensus       286 ~~~~~~~~~~~~~~~~~~  303 (814)
T 3mkq_A          286 YIASGFDNGFTVLSLGND  303 (814)
T ss_dssp             EEEEEETTEEEEEECSCC
T ss_pred             EEEEEeCCCEEEEEcCCC
Confidence            577778888999987654

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=99.95  E-value=1.4e-26  Score=233.37  Aligned_cols=231  Identities=18%  Similarity=0.194  Sum_probs=189.1

Q ss_pred             CCCCCCCCEEEEEECCCeEEEEECCCC----eEEEEEcccCCcEEEEEEcC--CC-EEEEEECCCeEEEEeCCC------
Q psy7057          43 LSPGAKVNTLLSASWDMTAKLWCLESQ----QCKLTIRQHEMAVWGVIQLA--NG-IIVTGCADKTIKLHSEEG------  109 (557)
Q Consensus        43 ~~~~~~~~~l~sgs~Dg~i~iwd~~~~----~~~~~l~~h~~~V~~l~~~~--~~-~l~sgs~dg~I~vwd~~~------  109 (557)
                      +.+++++.+|++|+.|++|++|++.++    +....+.+|...|.+++|+|  ++ .|++|+.|+.|++||...      
T Consensus        17 ~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~   96 (351)
T 3f3f_A           17 VVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECS   96 (351)
T ss_dssp             EEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTS
T ss_pred             EEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCccccc
Confidence            456678999999999999999999876    57778899999999999999  35 999999999999999433      


Q ss_pred             ----cEEEEEeCCCCCEEEEEEeCC--Ce-EEEEECCCeEEEEECCCCeEEEEEe-------------CCCCcEEEEEE-
Q psy7057         110 ----EFLKTLTGHTDCVRGLAVLND--TD-FVSCSNDASIRVWDSTTGKCVHTMY-------------GHPNFIYSVAA-  168 (557)
Q Consensus       110 ----~~~~~l~~h~~~V~~l~~~~~--~~-lvs~s~Dg~I~vwd~~~~~~~~~~~-------------~h~~~V~~l~~-  168 (557)
                          .++..+.+|...|.+++|+|+  +. +++++.|+.|++||+++++.+..+.             .|...+.++++ 
T Consensus        97 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (351)
T 3f3f_A           97 GRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWC  176 (351)
T ss_dssp             SCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEEC
T ss_pred             ccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEec
Confidence                567888899999999999998  66 7799999999999998876433322             57788999999 


Q ss_pred             -c---CCEEEEEeCCCeEEEEECCCC-----ceEeeCCccEEEEEEcCCC----c-EEEEEcCCcEEEEecCCCCcc---
Q psy7057         169 -H---GDLITSGGEDQCVCVYQNKAQ-----NSFMIPAMSVWAVAILPNS----D-IVTGSSDGIVRVFSANPDRQA---  231 (557)
Q Consensus       169 -~---~~~l~s~s~Dg~I~iwd~~~~-----~~~~~~~~~v~~v~~~p~g----~-l~sg~~Dg~I~iwd~~~~~~~---  231 (557)
                       +   +..+++++.++.+.+|+....     ..+..|...|++++|+|++    . |++++.||.|++|++......   
T Consensus       177 p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~  256 (351)
T 3f3f_A          177 PSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLAS  256 (351)
T ss_dssp             CCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC-----
T ss_pred             cCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCcccc
Confidence             3   679999999999988886544     3445688899999999998    6 899999999999999764211   


Q ss_pred             -----------------------------------------hhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEec
Q psy7057         232 -----------------------------------------EDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSA  270 (557)
Q Consensus       232 -----------------------------------------~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~  270 (557)
                                                               .......|...+..+.+.+... .+++++.||.|+||++
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~~~dg~v~iw~~  335 (351)
T 3f3f_A          257 EESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGT-ILSSAGDDGKVRLWKA  335 (351)
T ss_dssp             ----------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSC-CEEEEETTSCEEEEEE
T ss_pred             CCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCC-EEEEecCCCcEEEEec
Confidence                                                     1112234667788888877654 6899999999999999


Q ss_pred             CCCh
Q psy7057         271 NPDR  274 (557)
Q Consensus       271 ~~~~  274 (557)
                      ..++
T Consensus       336 ~~~~  339 (351)
T 3f3f_A          336 TYSN  339 (351)
T ss_dssp             CTTS
T ss_pred             CcCc
Confidence            8654

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=99.95  E-value=1.7e-25  Score=223.97  Aligned_cols=224  Identities=17%  Similarity=0.243  Sum_probs=186.3

Q ss_pred             EEEEe--ccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC--------------CCCCCCCCEEEEEECCCeEEEEEC
Q psy7057           4 LSTAL--YGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND--------------LSPGAKVNTLLSASWDMTAKLWCL   66 (557)
Q Consensus         4 l~~~l--~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~--------------~~~~~~~~~l~sgs~Dg~i~iwd~   66 (557)
                      +.+.+  .+|...|++++|+|+++ |++|+.||+|++|++.+              ......+..+++++.++.+++|+.
T Consensus        57 ~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~  136 (318)
T 4ggc_A           57 ILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDV  136 (318)
T ss_dssp             EEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEET
T ss_pred             EEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCCCEEEEEecCCceEeeec
Confidence            44444  57888999999999998 89999999999999987              233445789999999999999998


Q ss_pred             CCC-eEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCC-C----cEEEEEeCCCCCEEEEEEeCCCe-E---EE
Q psy7057          67 ESQ-QCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEE-G----EFLKTLTGHTDCVRGLAVLNDTD-F---VS  135 (557)
Q Consensus        67 ~~~-~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~-~----~~~~~l~~h~~~V~~l~~~~~~~-l---vs  135 (557)
                      ... ..+..+.+|...+.++.+.+++ .+++++.|++|++||.. +    ........|...|.++.++|.+. +   ++
T Consensus       137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~  216 (318)
T 4ggc_A          137 RVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGG  216 (318)
T ss_dssp             TSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEE
T ss_pred             CCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEe
Confidence            775 5677889999999999999988 99999999999999943 2    23456677889999999998743 2   36


Q ss_pred             EECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEe--CCCeEEEEECCCC---ceEeeCCccEEEEEEcCC
Q psy7057         136 CSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGG--EDQCVCVYQNKAQ---NSFMIPAMSVWAVAILPN  208 (557)
Q Consensus       136 ~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s--~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p~  208 (557)
                      ++.+++|++||.+......... +...+..+.+  .+..+++++  .|+.|++||+.+.   ..+.+|...|++++|+|+
T Consensus       217 ~~~~~~i~lwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spd  295 (318)
T 4ggc_A          217 GTSDRHIRIWNVCSGACLSAVD-AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPD  295 (318)
T ss_dssp             CTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTT
T ss_pred             cCCCCEEEEEeccccccccccc-ceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCC
Confidence            6788999999998888776654 6677888888  556666544  7999999998766   667789999999999999


Q ss_pred             Cc-EEEEEcCCcEEEEecCCC
Q psy7057         209 SD-IVTGSSDGIVRVFSANPD  228 (557)
Q Consensus       209 g~-l~sg~~Dg~I~iwd~~~~  228 (557)
                      +. |++|+.||+|+|||+...
T Consensus       296 g~~l~S~s~D~~v~iWd~~~~  316 (318)
T 4ggc_A          296 GATVASAAADETLRLWRCFEL  316 (318)
T ss_dssp             SSCEEEEETTTEEEEECCSCC
T ss_pred             CCEEEEEecCCeEEEEECCCC
Confidence            98 999999999999998654

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=99.95  E-value=9.3e-28  Score=253.67  Aligned_cols=225  Identities=16%  Similarity=0.175  Sum_probs=175.9

Q ss_pred             EEEeccCcccEEEEEEcC-CCc-EEEEECCCcEEEEcCCC------------------CCCCCCCCEEEEEECCCeEEEE
Q psy7057           5 STALYGHSMDVRSLSVTP-DGC-ILSASRDKSAKLWKPND------------------LSPGAKVNTLLSASWDMTAKLW   64 (557)
Q Consensus         5 ~~~l~gH~~~V~~l~~sp-dg~-l~sgs~Dg~V~iWd~~~------------------~~~~~~~~~l~sgs~Dg~i~iw   64 (557)
                      ...+.+|.+.|++|+|+| ++. |+|||.||+|++||+..                  +.+++++.+|++|+.||+|++|
T Consensus       157 ~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~w  236 (435)
T 4e54_B          157 FIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILL  236 (435)
T ss_dssp             EECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEE
T ss_pred             EEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeee
Confidence            345678999999999998 565 89999999999999875                  4567789999999999999999


Q ss_pred             ECCCCeEEEEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEeCC-CcE---EEEEeCCCCCEEEEEEeCCCe-EEEEE
Q psy7057          65 CLESQQCKLTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHSEE-GEF---LKTLTGHTDCVRGLAVLNDTD-FVSCS  137 (557)
Q Consensus        65 d~~~~~~~~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~~-~~~---~~~l~~h~~~V~~l~~~~~~~-lvs~s  137 (557)
                      |++. +.+.++.+|...|.+++|+|++  ++++|+.|++|++||.. ...   +....+|...|++++|+|++. |++++
T Consensus       237 d~~~-~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~  315 (435)
T 4e54_B          237 NMDG-KELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTD  315 (435)
T ss_dssp             ESSS-CBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEE
T ss_pred             ccCc-ceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEc
Confidence            9864 5677889999999999999976  78899999999999943 222   233467999999999999976 77999


Q ss_pred             CCCeEEEEECCCCeEEEEEeCCCCc------EEEEEE--cCCEEEEEe------------CCCeEEEEECCCCce---E-
Q psy7057         138 NDASIRVWDSTTGKCVHTMYGHPNF------IYSVAA--HGDLITSGG------------EDQCVCVYQNKAQNS---F-  193 (557)
Q Consensus       138 ~Dg~I~vwd~~~~~~~~~~~~h~~~------V~~l~~--~~~~l~s~s------------~Dg~I~iwd~~~~~~---~-  193 (557)
                      .|++|++||++++++...+..|...      +....+  ++..+++++            .++.|++||..+...   + 
T Consensus       316 ~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~  395 (435)
T 4e54_B          316 QKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLY  395 (435)
T ss_dssp             SSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEEC
T ss_pred             CCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEe
Confidence            9999999999999888887766431      222333  334444443            346899999876632   2 


Q ss_pred             eeCCccEEEE-EEcCCCcEEEEEcCCcEEEEecCCCCc
Q psy7057         194 MIPAMSVWAV-AILPNSDIVTGSSDGIVRVFSANPDRQ  230 (557)
Q Consensus       194 ~~~~~~v~~v-~~~p~g~l~sg~~Dg~I~iwd~~~~~~  230 (557)
                      ..|...|.++ +|+|+|.+++++.|+.|+||+++.++.
T Consensus       396 ~~~~~~v~s~~~fspdg~~lasg~d~~i~iW~~~~gk~  433 (435)
T 4e54_B          396 DPESSGISSLNEFNPMGDTLASAMGYHILIWSQQEART  433 (435)
T ss_dssp             CSSCCCCCCEEEECTTSSCEEEECSSEEEECCCC----
T ss_pred             CCCCCcEEEEEEECCCCCEEEEEcCCcEEEEECCcCee
Confidence            3466778887 699999955556699999999987654

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.95  E-value=5e-27  Score=253.72  Aligned_cols=219  Identities=12%  Similarity=0.088  Sum_probs=175.6

Q ss_pred             EEEEEECCCeEEEEECCCCeE----EEEEcccCCcEEEEEEcCC-------CEEEEEECCCeEEEEeCCCc---------
Q psy7057          51 TLLSASWDMTAKLWCLESQQC----KLTIRQHEMAVWGVIQLAN-------GIIVTGCADKTIKLHSEEGE---------  110 (557)
Q Consensus        51 ~l~sgs~Dg~i~iwd~~~~~~----~~~l~~h~~~V~~l~~~~~-------~~l~sgs~dg~I~vwd~~~~---------  110 (557)
                      .+++++.|++|+||++.+++.    ..++.+|...|++++|+|+       ++|++++.|++|++||....         
T Consensus       175 ~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~  254 (524)
T 2j04_B          175 MFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKM  254 (524)
T ss_dssp             -------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEEC
T ss_pred             hhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCcccccccee
Confidence            344566889999999987653    2456778899999999996       39999999999999995322         


Q ss_pred             ---EEEEEeCCCCCEEEEEEeCCCeEEEEECCCeEEEEECCCC-eEEEEEeCCCCcEEEEE--E--cC-CEEEEEeCCCe
Q psy7057         111 ---FLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTG-KCVHTMYGHPNFIYSVA--A--HG-DLITSGGEDQC  181 (557)
Q Consensus       111 ---~~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~-~~~~~~~~h~~~V~~l~--~--~~-~~l~s~s~Dg~  181 (557)
                         +...+.+|...|++++|++++.|++|+.||+|++||++++ .+...+.+|...|++|+  +  ++ .+|+||+.|++
T Consensus       255 ~~~p~~~l~~h~~~v~sv~~s~~~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~t  334 (524)
T 2j04_B          255 CEKPSLTLSLADSLITTFDFLSPTTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGY  334 (524)
T ss_dssp             CCSCSEEECCTTTCEEEEEESSSSEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSE
T ss_pred             ecCceEEEEcCCCCEEEEEecCCCeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCe
Confidence               2347789999999999998888999999999999999876 45567889999999994  4  45 68999999999


Q ss_pred             EEEEECCCC---ceEeeCCc--cEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCcee
Q psy7057         182 VCVYQNKAQ---NSFMIPAM--SVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIG  255 (557)
Q Consensus       182 I~iwd~~~~---~~~~~~~~--~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~  255 (557)
                      |++||+++.   ..+..|..  .|++++|+|++. +++++.|++|++||++......  ....|...|..+.+.+... .
T Consensus       335 vklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~--~l~gH~~~V~sva~Sp~g~-~  411 (524)
T 2j04_B          335 FYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVH--PLVSRETTITAIGVSRLHP-M  411 (524)
T ss_dssp             EEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCE--EEEECSSCEEEEECCSSCC-B
T ss_pred             EEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccce--eeecCCCceEEEEeCCCCC-e
Confidence            999998765   35555543  588999999987 8899999999999998765432  2346888999999987655 5


Q ss_pred             EEEEeCCCcEEEEecCC
Q psy7057         256 GVKVSDDGIVRVFSANP  272 (557)
Q Consensus       256 ~vs~s~DG~IrvW~~~~  272 (557)
                      +++||.||+|++|++..
T Consensus       412 l~Sgs~Dgtv~lwd~~~  428 (524)
T 2j04_B          412 VLAGSADGSLIITNAAR  428 (524)
T ss_dssp             CEEEETTTEEECCBSCS
T ss_pred             EEEEECCCEEEEEechH
Confidence            89999999999999764

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=99.95  E-value=6.5e-26  Score=234.45  Aligned_cols=228  Identities=14%  Similarity=0.128  Sum_probs=183.0

Q ss_pred             CCCCCCC-CEEEEEECCCeEEEEECCCCeEEEEEc--ccCCcEEEEEEcC-CC-EEEEEECCCeEEEEeCCCcEEEEEeC
Q psy7057          43 LSPGAKV-NTLLSASWDMTAKLWCLESQQCKLTIR--QHEMAVWGVIQLA-NG-IIVTGCADKTIKLHSEEGEFLKTLTG  117 (557)
Q Consensus        43 ~~~~~~~-~~l~sgs~Dg~i~iwd~~~~~~~~~l~--~h~~~V~~l~~~~-~~-~l~sgs~dg~I~vwd~~~~~~~~l~~  117 (557)
                      +.+++++ .+|++|+.|++|++||+.+++....+.  +|...|.+++|+| ++ .|++++.|+.|++||..+..+..+..
T Consensus        79 ~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~  158 (383)
T 3ei3_B           79 LEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAK  158 (383)
T ss_dssp             EEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCEEEEEEC
T ss_pred             EEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCceEEEec
Confidence            4566777 899999999999999999887777665  6999999999999 54 99999999999999988888877765


Q ss_pred             CC---CCEEEEEEeCCCe-EEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCC-EEEEEeCCCeEEEEECCC-
Q psy7057         118 HT---DCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGD-LITSGGEDQCVCVYQNKA-  189 (557)
Q Consensus       118 h~---~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~-~l~s~s~Dg~I~iwd~~~-  189 (557)
                      |.   ..|.+++|+|++. |++++.|+.|++||+ +++++..+.+|...|.+++|  ++. +|++++.|+.|++||++. 
T Consensus       159 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~  237 (383)
T 3ei3_B          159 TDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNI  237 (383)
T ss_dssp             CCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGC
T ss_pred             cCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCC
Confidence            54   7899999999976 779999999999998 58889999999999999999  455 899999999999999764 


Q ss_pred             ---C--ceEeeCCccEEEEEEcC-CCc-EEEEEcCCcEEEEecCCCCcchhHHHh-----cccce----------eEEEe
Q psy7057         190 ---Q--NSFMIPAMSVWAVAILP-NSD-IVTGSSDGIVRVFSANPDRQAEDAVQA-----QYAEE----------VKKLK  247 (557)
Q Consensus       190 ---~--~~~~~~~~~v~~v~~~p-~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~-----~~~~~----------v~~l~  247 (557)
                         .  .....|...|.+++|+| ++. |++++.|+.|++||+.+..........     .+...          +..+.
T Consensus       238 ~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  317 (383)
T 3ei3_B          238 KDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAG  317 (383)
T ss_dssp             CSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEE
T ss_pred             CcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEE
Confidence               2  33346888999999999 888 889999999999999876543221110     11111          22233


Q ss_pred             ccCCCceeEEEEeCCCcEEEEecCCCh
Q psy7057         248 SANEQEIGGVKVSDDGIVRVFSANPDR  274 (557)
Q Consensus       248 ~~~~~~~~~vs~s~DG~IrvW~~~~~~  274 (557)
                      +.++...   +++.||.|+||++..++
T Consensus       318 ~s~dg~~---s~s~d~~i~iwd~~~~~  341 (383)
T 3ei3_B          318 RYPDDQL---LLNDKRTIDIYDANSGG  341 (383)
T ss_dssp             CBCCTTT---CTTCCCCEEEEETTTCC
T ss_pred             ecCCccc---ccCCCCeEEEEecCCCc
Confidence            3333322   66789999999987654

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=99.95  E-value=3.8e-26  Score=242.29  Aligned_cols=258  Identities=14%  Similarity=0.166  Sum_probs=204.3

Q ss_pred             ccEEEEEEcCCCcEEEEECCCcEEEEcCCC--------------------------------------------------
Q psy7057          13 MDVRSLSVTPDGCILSASRDKSAKLWKPND--------------------------------------------------   42 (557)
Q Consensus        13 ~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~--------------------------------------------------   42 (557)
                      .++.+++|+|+|++++++.++.|++||+.+                                                  
T Consensus         5 ~p~~~v~~s~dg~~l~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (450)
T 2vdu_B            5 HPLQNLLTSRDGSLVFAIIKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDSI   84 (450)
T ss_dssp             CCCCEEEECSSSSEEEEEETTEEEEEEEETTTEEEEEEEEECCC------------------------------------
T ss_pred             ccEEEEEecCCCCEEEEEeCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCccc
Confidence            588999999999977777889999998532                                                  


Q ss_pred             -----------------------CCCCCCCCEE-EEEECCCeEEEEECC--CCeEEEEEc--ccCCcEEEEEEcCCC-EE
Q psy7057          43 -----------------------LSPGAKVNTL-LSASWDMTAKLWCLE--SQQCKLTIR--QHEMAVWGVIQLANG-II   93 (557)
Q Consensus        43 -----------------------~~~~~~~~~l-~sgs~Dg~i~iwd~~--~~~~~~~l~--~h~~~V~~l~~~~~~-~l   93 (557)
                                             +.+++++.+| ++|+.|++|++|++.  +++++..+.  .|...|++++|+|++ .|
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l  164 (450)
T 2vdu_B           85 KRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTV  164 (450)
T ss_dssp             ---------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEE
T ss_pred             cccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEE
Confidence                                   3456788886 889999999999999  888887776  567899999999998 99


Q ss_pred             EEEECCCeEEEEeC-CCc----EEEEEeCCCCCEEEEEEeCC---Ce-EEEEECCCeEEEEECCCCeEEEE-EeCCCCcE
Q psy7057          94 VTGCADKTIKLHSE-EGE----FLKTLTGHTDCVRGLAVLND---TD-FVSCSNDASIRVWDSTTGKCVHT-MYGHPNFI  163 (557)
Q Consensus        94 ~sgs~dg~I~vwd~-~~~----~~~~l~~h~~~V~~l~~~~~---~~-lvs~s~Dg~I~vwd~~~~~~~~~-~~~h~~~V  163 (557)
                      ++|+.++.+++|+. ++.    +...+.+|...|++++|+|+   +. |++++.|++|++||+++++++.. +.+|...|
T Consensus       165 ~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v  244 (450)
T 2vdu_B          165 IIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFV  244 (450)
T ss_dssp             EEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCE
T ss_pred             EEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCce
Confidence            99999999999994 333    23367889999999999998   86 77999999999999999998887 55899999


Q ss_pred             EEEEE-cCCEEEEEeCCCeEEEEECCCCc---eEee-------------------------CCccEEEEEEcCCCc-EEE
Q psy7057         164 YSVAA-HGDLITSGGEDQCVCVYQNKAQN---SFMI-------------------------PAMSVWAVAILPNSD-IVT  213 (557)
Q Consensus       164 ~~l~~-~~~~l~s~s~Dg~I~iwd~~~~~---~~~~-------------------------~~~~v~~v~~~p~g~-l~s  213 (557)
                      .+++| ++.+|++++.|++|++||+.+.+   .+..                         ....|.+++++|+++ +++
T Consensus       245 ~~~~~sd~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~  324 (450)
T 2vdu_B          245 SSICCGKDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAF  324 (450)
T ss_dssp             EEEEECSTTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEE
T ss_pred             EEEEECCCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEE
Confidence            99999 68899999999999999987652   3321                         234689999999998 777


Q ss_pred             EE-cCCcEEEEec--CCCCc-chhHHHhcccceeEEEeccCCCceeEEEE-eC------CCcEEEEecCCC
Q psy7057         214 GS-SDGIVRVFSA--NPDRQ-AEDAVQAQYAEEVKKLKSANEQEIGGVKV-SD------DGIVRVFSANPD  273 (557)
Q Consensus       214 g~-~Dg~I~iwd~--~~~~~-~~~~~~~~~~~~v~~l~~~~~~~~~~vs~-s~------DG~IrvW~~~~~  273 (557)
                      ++ .|+.|++|++  ..... ........+ ..+..+.+.+ +.. +++. +.      +..|++|.++.+
T Consensus       325 ~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~-~~~-~v~~~~~~~~~~~~~~i~v~~~~~~  392 (450)
T 2vdu_B          325 FVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHN-DEF-QVTLDNKESSGVQKNFAKFIEYNLN  392 (450)
T ss_dssp             EETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEET-TEE-EEEECCTTCCSSCCCSEEEEEEETT
T ss_pred             EECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecC-CcE-EEEEecccCCCCCCcceEEEEEEcC
Confidence            77 8999999999  43311 111122223 6678888877 333 3443 32      567999987654

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=99.95  E-value=4.2e-26  Score=232.94  Aligned_cols=242  Identities=12%  Similarity=0.056  Sum_probs=182.1

Q ss_pred             cCCCc-EEEEECCCcEEEEcCCC--------------CCCCCCCCEEEEEECCCeEEEEECC---------CCeEEEEEc
Q psy7057          21 TPDGC-ILSASRDKSAKLWKPND--------------LSPGAKVNTLLSASWDMTAKLWCLE---------SQQCKLTIR   76 (557)
Q Consensus        21 spdg~-l~sgs~Dg~V~iWd~~~--------------~~~~~~~~~l~sgs~Dg~i~iwd~~---------~~~~~~~l~   76 (557)
                      .+++. |++|+.||+|++||+.+              +.+++.   +++++.|++|++|+..         +++.+..+.
T Consensus        45 ~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~  121 (343)
T 3lrv_A           45 YYDKWVCMCRCEDGALHFTQLKDSKTITTITTPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIE  121 (343)
T ss_dssp             SEEEEEEEEEEETTEEEEEEESSSSCEEEEEEECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEE
T ss_pred             cCCCCEEEEECCCCcEEEEECCCCcEEEEEecCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEee
Confidence            34555 88999999999999875              444544   9999999999999765         445444443


Q ss_pred             -ccCCcEEEEEEcC--CC-EEEEEECCCeEEEEe-CCCcEEEEEe-CCCCCEEEEEEeCCCe-EEEEECCCeEEEEECCC
Q psy7057          77 -QHEMAVWGVIQLA--NG-IIVTGCADKTIKLHS-EEGEFLKTLT-GHTDCVRGLAVLNDTD-FVSCSNDASIRVWDSTT  149 (557)
Q Consensus        77 -~h~~~V~~l~~~~--~~-~l~sgs~dg~I~vwd-~~~~~~~~l~-~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~  149 (557)
                       +|...|.+++|+|  ++ .+++++.|++|++|| .+++++.... .|...|++++|+|++. |++|+.|+.|++||+++
T Consensus       122 ~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~  201 (343)
T 3lrv_A          122 VDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSS  201 (343)
T ss_dssp             CCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSC
T ss_pred             cCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCC
Confidence             6778999999999  87 999999999999999 4556655553 4556899999999987 56889999999999999


Q ss_pred             CeEE-EEEeC-CCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCCce---Eee---CCccE--EEEEEcCCCc-EEEEEc
Q psy7057         150 GKCV-HTMYG-HPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQNS---FMI---PAMSV--WAVAILPNSD-IVTGSS  216 (557)
Q Consensus       150 ~~~~-~~~~~-h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~~~---~~~---~~~~v--~~v~~~p~g~-l~sg~~  216 (557)
                      ++.+ ..+.. |...|.+++|  ++.+|++++. +.|++||++....   +..   +...+  .+++|+|+++ +++++.
T Consensus       202 ~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~  280 (343)
T 3lrv_A          202 PDQASSRFPVDEEAKIKEVKFADNGYWMVVECD-QTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSN  280 (343)
T ss_dssp             TTSCCEECCCCTTSCEEEEEECTTSSEEEEEES-SBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEET
T ss_pred             CCCCccEEeccCCCCEEEEEEeCCCCEEEEEeC-CeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecC
Confidence            9887 78888 9999999999  6779999994 5999999876622   221   22333  3699999999 778787


Q ss_pred             -CCcEEEEecCCCCcchhHHHhcccceeEEEeccC--CCceeEEEEeCCCcEEEEecCC
Q psy7057         217 -DGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSAN--EQEIGGVKVSDDGIVRVFSANP  272 (557)
Q Consensus       217 -Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~--~~~~~~vs~s~DG~IrvW~~~~  272 (557)
                       |+.|+||++......-..      ..+..+.+.+  .....+++++.||.++++-...
T Consensus       281 ~d~~i~v~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~  333 (343)
T 3lrv_A          281 ESNSLTIYKFDKKTKNWTK------DEESALCLQSDTADFTDMDVVCGDGGIAAILKTN  333 (343)
T ss_dssp             TTTEEEEEEECTTTCSEEE------EEEEECCC----CCCCEEEEEEETTEEEEEEECS
T ss_pred             CCCcEEEEEEcccccceEe------cCceeEecCccccccceeEEEecCCceEEEEecC
Confidence             999999998654322110      2333444433  1334678899999999986544

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=99.95  E-value=7.6e-26  Score=227.02  Aligned_cols=217  Identities=12%  Similarity=0.043  Sum_probs=167.3

Q ss_pred             CcEEEEEeccCccc-------------------------EEEEEEcCC----Cc-EEEEECCCcEEEEcCCCCCCCCCCC
Q psy7057           1 MYKLSTALYGHSMD-------------------------VRSLSVTPD----GC-ILSASRDKSAKLWKPNDLSPGAKVN   50 (557)
Q Consensus         1 ~~kl~~~l~gH~~~-------------------------V~~l~~spd----g~-l~sgs~Dg~V~iWd~~~~~~~~~~~   50 (557)
                      +|++.+++++|+.+                         |++|+++||    +. +++++  ..+++|++.      .++
T Consensus        75 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s~g--~~~~v~~l~------~g~  146 (356)
T 2w18_A           75 QWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLLKSG--NIKAVLGLT------KRR  146 (356)
T ss_dssp             BEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEEEEEE--EEEEEEEET------TTE
T ss_pred             cceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEEEeCC--CeEEEEecC------CCc
Confidence            36777778777764                         455555556    55 55555  347788762      344


Q ss_pred             EEEEEE--CCCeEEEEEC-CCCeEEEEEcccCCcEEEEEEcC---CC-EEEEEECCCeEEEEe-CCCcEEEEEeCCC---
Q psy7057          51 TLLSAS--WDMTAKLWCL-ESQQCKLTIRQHEMAVWGVIQLA---NG-IIVTGCADKTIKLHS-EEGEFLKTLTGHT---  119 (557)
Q Consensus        51 ~l~sgs--~Dg~i~iwd~-~~~~~~~~l~~h~~~V~~l~~~~---~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~---  119 (557)
                      .+.+++  .|++|++|++ .+++.+..+.+|...+..++|++   ++ .|++|+.|++|+||| .++++++++.+|.   
T Consensus       147 lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v  226 (356)
T 2w18_A          147 LVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQ  226 (356)
T ss_dssp             EEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---
T ss_pred             EEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcce
Confidence            444433  5999999999 55888889999999999999998   45 999999999999999 5688999998754   


Q ss_pred             CCEEEEEEeCCCeE-------------EEEECCCeEEEEECCCCeEEEEE-----eCCCCcEEEEEEcCCEEEEEeCCCe
Q psy7057         120 DCVRGLAVLNDTDF-------------VSCSNDASIRVWDSTTGKCVHTM-----YGHPNFIYSVAAHGDLITSGGEDQC  181 (557)
Q Consensus       120 ~~V~~l~~~~~~~l-------------vs~s~Dg~I~vwd~~~~~~~~~~-----~~h~~~V~~l~~~~~~l~s~s~Dg~  181 (557)
                      ..+.+++|+|++.+             ++|+.|++|++||..+++++..+     .+|...+.+..+++..+++++.|++
T Consensus       227 ~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgT  306 (356)
T 2w18_A          227 ASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGT  306 (356)
T ss_dssp             CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEETTEEEEEETTSC
T ss_pred             eeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccCCCEEEEEcCCCc
Confidence            46788899999873             46889999999999999988776     3777777677778889999999999


Q ss_pred             EEEEECCCC---ceEeeCCccEE-EEEEcCCCc-EEEEEcCCcEEEEec
Q psy7057         182 VCVYQNKAQ---NSFMIPAMSVW-AVAILPNSD-IVTGSSDGIVRVFSA  225 (557)
Q Consensus       182 I~iwd~~~~---~~~~~~~~~v~-~v~~~p~g~-l~sg~~Dg~I~iwd~  225 (557)
                      |+|||+.+.   .++.+|...+. +++|+|+|+ |++|+.|++||||++
T Consensus       307 IkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~  355 (356)
T 2w18_A          307 IAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY  355 (356)
T ss_dssp             EEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred             EEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence            999998776   45666766555 689999999 889999999999985

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=99.94  E-value=3.8e-26  Score=238.23  Aligned_cols=232  Identities=22%  Similarity=0.203  Sum_probs=188.1

Q ss_pred             CCCCCCCCE-EEEEECCCeEEEEECCCCe----EEEEEcccCCcEEEEEEcC-CC-EEEEEECCCeEEEEeCC-C-----
Q psy7057          43 LSPGAKVNT-LLSASWDMTAKLWCLESQQ----CKLTIRQHEMAVWGVIQLA-NG-IIVTGCADKTIKLHSEE-G-----  109 (557)
Q Consensus        43 ~~~~~~~~~-l~sgs~Dg~i~iwd~~~~~----~~~~l~~h~~~V~~l~~~~-~~-~l~sgs~dg~I~vwd~~-~-----  109 (557)
                      ++++++... +++++.||.|++|++....    ....+.+|...|++++|+| ++ +|++|+.|++|++|+.. +     
T Consensus        40 ~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~  119 (402)
T 2aq5_A           40 CAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLP  119 (402)
T ss_dssp             EEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSC
T ss_pred             EEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccc
Confidence            444444433 3357889999999996643    3445778999999999999 66 99999999999999943 3     


Q ss_pred             --cEEEEEeCCCCCEEEEEEeCCC--eEEEEECCCeEEEEECCCCeEEEEE--eCCCCcEEEEEE--cCCEEEEEeCCCe
Q psy7057         110 --EFLKTLTGHTDCVRGLAVLNDT--DFVSCSNDASIRVWDSTTGKCVHTM--YGHPNFIYSVAA--HGDLITSGGEDQC  181 (557)
Q Consensus       110 --~~~~~l~~h~~~V~~l~~~~~~--~lvs~s~Dg~I~vwd~~~~~~~~~~--~~h~~~V~~l~~--~~~~l~s~s~Dg~  181 (557)
                        .++..+.+|...|++++|+|++  .|++++.|++|++||+++++++..+  ..|...|.+++|  ++.+|++++.|+.
T Consensus       120 ~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~  199 (402)
T 2aq5_A          120 LREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKR  199 (402)
T ss_dssp             BCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSE
T ss_pred             cCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCc
Confidence              5678899999999999999996  4789999999999999999999999  789999999999  6789999999999


Q ss_pred             EEEEECCCC---ceE-eeCCcc-EEEEEEcCCCc-EEEE---EcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCC
Q psy7057         182 VCVYQNKAQ---NSF-MIPAMS-VWAVAILPNSD-IVTG---SSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQ  252 (557)
Q Consensus       182 I~iwd~~~~---~~~-~~~~~~-v~~v~~~p~g~-l~sg---~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~  252 (557)
                      |++||+++.   ..+ ..|... +.+++|+|++. +++|   +.|+.|++||+.............+...+..+.+.+..
T Consensus       200 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~  279 (402)
T 2aq5_A          200 VRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDT  279 (402)
T ss_dssp             EEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTT
T ss_pred             EEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCC
Confidence            999998876   333 455554 89999999999 5566   58999999999876542222222345567788888887


Q ss_pred             ceeEEEEeCCCcEEEEecCCCh
Q psy7057         253 EIGGVKVSDDGIVRVFSANPDR  274 (557)
Q Consensus       253 ~~~~vs~s~DG~IrvW~~~~~~  274 (557)
                      ...+++++.||.|++|++..++
T Consensus       280 ~~l~~~g~~dg~i~i~d~~~~~  301 (402)
T 2aq5_A          280 NIVYLCGKGDSSIRYFEITSEA  301 (402)
T ss_dssp             TEEEEEETTCSCEEEEEECSST
T ss_pred             CEEEEEEcCCCeEEEEEecCCC
Confidence            7766788899999999998764

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=99.94  E-value=3.6e-25  Score=232.98  Aligned_cols=228  Identities=16%  Similarity=0.172  Sum_probs=176.1

Q ss_pred             CCCCCCCCEEEEEECCCeEEEEECCCCe-----------EEEEEcccC------------CcEEEEEEcCCC---EEEEE
Q psy7057          43 LSPGAKVNTLLSASWDMTAKLWCLESQQ-----------CKLTIRQHE------------MAVWGVIQLANG---IIVTG   96 (557)
Q Consensus        43 ~~~~~~~~~l~sgs~Dg~i~iwd~~~~~-----------~~~~l~~h~------------~~V~~l~~~~~~---~l~sg   96 (557)
                      +++++++.+|++|+.||.|+||++.+++           +...+.+|.            ..|.+++|+|++   .|+++
T Consensus        34 v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~  113 (447)
T 3dw8_B           34 VEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLS  113 (447)
T ss_dssp             EEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEE
T ss_pred             EEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcceEEEe
Confidence            5677889999999999999999998876           578899998            889999999974   89999


Q ss_pred             ECCCeEEEEeCCCcE----------------------------------------EEE-EeCCCCCEEEEEEeCCCe-EE
Q psy7057          97 CADKTIKLHSEEGEF----------------------------------------LKT-LTGHTDCVRGLAVLNDTD-FV  134 (557)
Q Consensus        97 s~dg~I~vwd~~~~~----------------------------------------~~~-l~~h~~~V~~l~~~~~~~-lv  134 (557)
                      +.|++|++|+.....                                        ... +.+|...|++++|+|++. |+
T Consensus       114 s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~  193 (447)
T 3dw8_B          114 TNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYL  193 (447)
T ss_dssp             ECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEE
T ss_pred             CCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEE
Confidence            999999999943211                                        112 367999999999999987 55


Q ss_pred             EEECCCeEEEEECCC-CeEEEE-------EeCCCCcEEEEEE--cC-CEEEEEeCCCeEEEEECCCC-------ceEeeC
Q psy7057         135 SCSNDASIRVWDSTT-GKCVHT-------MYGHPNFIYSVAA--HG-DLITSGGEDQCVCVYQNKAQ-------NSFMIP  196 (557)
Q Consensus       135 s~s~Dg~I~vwd~~~-~~~~~~-------~~~h~~~V~~l~~--~~-~~l~s~s~Dg~I~iwd~~~~-------~~~~~~  196 (557)
                      +| .|++|++||+++ ++++..       +.+|...|.+++|  ++ .+|++++.|+.|++||++..       ..+..|
T Consensus       194 s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~  272 (447)
T 3dw8_B          194 SA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEP  272 (447)
T ss_dssp             EE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC
T ss_pred             Ee-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccC
Confidence            66 899999999984 444443       4579999999999  45 79999999999999997653       345555


Q ss_pred             Cc------------cEEEEEEcCCCc-EEEEEcCCcEEEEecCC-CCcchhHHHhcccc---------------eeEEEe
Q psy7057         197 AM------------SVWAVAILPNSD-IVTGSSDGIVRVFSANP-DRQAEDAVQAQYAE---------------EVKKLK  247 (557)
Q Consensus       197 ~~------------~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~-~~~~~~~~~~~~~~---------------~v~~l~  247 (557)
                      ..            .|.+++|+|+++ |++++. +.|++||+.. .+......  .+..               .+..+.
T Consensus       273 ~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~i~~~~~~~  349 (447)
T 3dw8_B          273 EDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQ--VHEYLRSKLCSLYENDCIFDKFECC  349 (447)
T ss_dssp             -----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEE--SCGGGTTTHHHHHHTSGGGCCCCEE
T ss_pred             CCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceee--ccccccccccccccccccccceEEE
Confidence            54            899999999999 777777 9999999986 44332111  1111               122255


Q ss_pred             ccCCCceeEEEEeCCCcEEEEecCCChh
Q psy7057         248 SANEQEIGGVKVSDDGIVRVFSANPDRQ  275 (557)
Q Consensus       248 ~~~~~~~~~vs~s~DG~IrvW~~~~~~~  275 (557)
                      +.+... .+++++.||.|++|++..++.
T Consensus       350 ~s~~~~-~l~s~s~dg~v~iwd~~~~~~  376 (447)
T 3dw8_B          350 WNGSDS-VVMTGSYNNFFRMFDRNTKRD  376 (447)
T ss_dssp             ECTTSS-EEEEECSTTEEEEEETTTCCE
T ss_pred             ECCCCC-EEEEeccCCEEEEEEcCCCcc
Confidence            555544 579999999999999987643

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=99.94  E-value=7.8e-25  Score=224.30  Aligned_cols=203  Identities=17%  Similarity=0.251  Sum_probs=166.7

Q ss_pred             EEEEEeccCcccEEEEEEcCCCcEEEEECCCcEEEEcCCCCCCCCCCCEEEEEECCCeEEEEECCCCe--EEEEEcccCC
Q psy7057           3 KLSTALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCLESQQ--CKLTIRQHEM   80 (557)
Q Consensus         3 kl~~~l~gH~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~~~~~~~~~~l~sgs~Dg~i~iwd~~~~~--~~~~l~~h~~   80 (557)
                      ++.+.+.+|.+.|++++|+++.                       ++.+|++|+.|++|++||+.+++  .+..+..|..
T Consensus        46 ~~~~~~~~h~~~v~~~~~~~~~-----------------------~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~  102 (379)
T 3jrp_A           46 KLIDTLTGHEGPVWRVDWAHPK-----------------------FGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSA  102 (379)
T ss_dssp             EEEEEECCCSSCEEEEEECCGG-----------------------GCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSS
T ss_pred             eeeeEecCCCCcEEEEEeCCCC-----------------------CCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCc
Confidence            3556788999999999998762                       24556666666667777776665  6778888999


Q ss_pred             cEEEEEEcCC--C-EEEEEECCCeEEEEeCCC---cEEEEEeCCCCCEEEEEEeC-------------CCe-EEEEECCC
Q psy7057          81 AVWGVIQLAN--G-IIVTGCADKTIKLHSEEG---EFLKTLTGHTDCVRGLAVLN-------------DTD-FVSCSNDA  140 (557)
Q Consensus        81 ~V~~l~~~~~--~-~l~sgs~dg~I~vwd~~~---~~~~~l~~h~~~V~~l~~~~-------------~~~-lvs~s~Dg  140 (557)
                      .|.+++|+|+  + .+++++.|+.|++||...   .....+..|...|.+++|+|             ++. +++++.|+
T Consensus       103 ~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg  182 (379)
T 3jrp_A          103 SVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN  182 (379)
T ss_dssp             CEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTS
T ss_pred             ceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCC
Confidence            9999999998  6 999999999999999433   34567788999999999999             444 78999999


Q ss_pred             eEEEEECCCCe----EEEEEeCCCCcEEEEEE--c---CCEEEEEeCCCeEEEEECCCC-----ceE---eeCCccEEEE
Q psy7057         141 SIRVWDSTTGK----CVHTMYGHPNFIYSVAA--H---GDLITSGGEDQCVCVYQNKAQ-----NSF---MIPAMSVWAV  203 (557)
Q Consensus       141 ~I~vwd~~~~~----~~~~~~~h~~~V~~l~~--~---~~~l~s~s~Dg~I~iwd~~~~-----~~~---~~~~~~v~~v  203 (557)
                      .|++||+++++    ++..+.+|...|.+++|  +   +.+|++++.|+.|++||+...     ..+   ..+...|+++
T Consensus       183 ~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~  262 (379)
T 3jrp_A          183 LVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRA  262 (379)
T ss_dssp             CEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEE
T ss_pred             eEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEE
Confidence            99999997654    56778899999999999  4   678999999999999997653     111   2267789999


Q ss_pred             EEcCCCc-EEEEEcCCcEEEEecCCC
Q psy7057         204 AILPNSD-IVTGSSDGIVRVFSANPD  228 (557)
Q Consensus       204 ~~~p~g~-l~sg~~Dg~I~iwd~~~~  228 (557)
                      +|+|++. |++++.||.|++|++...
T Consensus       263 ~~s~~g~~l~~~~~dg~i~iw~~~~~  288 (379)
T 3jrp_A          263 SWSLSGNVLALSGGDNKVTLWKENLE  288 (379)
T ss_dssp             EECSSSCCEEEEESSSSEEEEEEEET
T ss_pred             EEcCCCCEEEEecCCCcEEEEeCCCC
Confidence            9999998 889999999999998753

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.94  E-value=1.6e-25  Score=238.27  Aligned_cols=252  Identities=10%  Similarity=0.033  Sum_probs=194.6

Q ss_pred             ccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC---CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEc-ccCCcEE
Q psy7057           9 YGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND---LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIR-QHEMAVW   83 (557)
Q Consensus         9 ~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~---~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~-~h~~~V~   83 (557)
                      +.-...|.+|+|+|||+ +||++.|++|+  |...   +.-++..-+-+.-+-||+++.|++.+++....+. .|...|.
T Consensus        12 ~~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~   89 (588)
T 2j04_A           12 KEFEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYPR   89 (588)
T ss_dssp             CCCSSSSCCEEECTTSCEEEECSSSEEEE--EECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCEE
T ss_pred             hHhhccEEEEEECCCCCEEEEEcCCceee--cccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcEE
Confidence            34567899999999998 88999999999  6544   2222223344555667777777777665333333 5688999


Q ss_pred             EEEEcCCC-EEEEEECCCeEEEEeCCCcEEEEEeCCCC-----CEEEEEEeCCCe-EEEEECCCeEEEEECCCCe-----
Q psy7057          84 GVIQLANG-IIVTGCADKTIKLHSEEGEFLKTLTGHTD-----CVRGLAVLNDTD-FVSCSNDASIRVWDSTTGK-----  151 (557)
Q Consensus        84 ~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~~~l~~h~~-----~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~-----  151 (557)
                      +++|+|+| .|++++.||+|++|+..+ ++..+. |..     .|.+++|+|+|+ |++|+.||+|++||+.+++     
T Consensus        90 ~vawSPdG~~LAs~s~dg~V~iwd~~~-~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~  167 (588)
T 2j04_A           90 VCKPSPIDDWMAVLSNNGNVSVFKDNK-MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPE  167 (588)
T ss_dssp             EEEECSSSSCEEEEETTSCEEEEETTE-EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCC
T ss_pred             EEEECCCCCEEEEEeCCCcEEEEeCCc-eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCcccccc
Confidence            99999999 899999999999999655 666777 665     499999999988 7799999999999998875     


Q ss_pred             --EEEEE----eCCCCcEEEEEEcCCEEEEEeCCCeEEEEECCCCc------eE-eeCCccEEEEEEcCCCcEEEEEcCC
Q psy7057         152 --CVHTM----YGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQN------SF-MIPAMSVWAVAILPNSDIVTGSSDG  218 (557)
Q Consensus       152 --~~~~~----~~h~~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~~~------~~-~~~~~~v~~v~~~p~g~l~sg~~Dg  218 (557)
                        .+.++    .+|...|.+++|.++.+++++.|++|++|++....      ++ ..|...|.+++|+ +..+++++ ++
T Consensus       168 ~i~l~ti~~~~~gh~~~V~sVawSPdgLaass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs-g~~LASa~-~~  245 (588)
T 2j04_A          168 FYFESSIRLSDAGSKDWVTHIVWYEDVLVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV-DYKVVLTC-PG  245 (588)
T ss_dssp             CEEEEEEECSCTTCCCCEEEEEEETTEEEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE-TTEEEEEC-SS
T ss_pred             ceeeeeeecccccccccEEEEEEcCCcEEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE-CCEEEEEe-CC
Confidence              46777    56788999999943338999999999999976542      35 3677899999999 43377776 79


Q ss_pred             cEEEEecCCCCcchhHHHhcccceeEEEec--cCCCceeEEEEeCCCcEEEEec
Q psy7057         219 IVRVFSANPDRQAEDAVQAQYAEEVKKLKS--ANEQEIGGVKVSDDGIVRVFSA  270 (557)
Q Consensus       219 ~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~--~~~~~~~~vs~s~DG~IrvW~~  270 (557)
                      +|++|++.+.+......  +|...+..+.+  .++ ...+++++.||+ |+|..
T Consensus       246 tIkLWd~~~~~~~~~~~--gh~~~V~~va~~~s~d-~~~La~a~edG~-klw~~  295 (588)
T 2j04_A          246 YVHKIDLKNYSISSLKT--GSLENFHIIPLNHEKE-STILLMSNKTSY-KVLLE  295 (588)
T ss_dssp             EEEEEETTTTEEEEEEC--SCCSCCCEEEETTCSS-CEEEEECSSCEE-EEEES
T ss_pred             eEEEEECCCCeEEEEEc--CCCceEEEEEeeeCCC-CCEEEEEcCCCC-EEEee
Confidence            99999998776532221  47777887777  433 345788889999 99997

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=99.93  E-value=1.5e-25  Score=233.69  Aligned_cols=218  Identities=11%  Similarity=0.033  Sum_probs=159.1

Q ss_pred             CCCEEEEEECCCeEEEEECCCCeEEE-----EEcccCCcEEEEEEcC--------CC-EEEEEECCCeEEEEe-CCCcEE
Q psy7057          48 KVNTLLSASWDMTAKLWCLESQQCKL-----TIRQHEMAVWGVIQLA--------NG-IIVTGCADKTIKLHS-EEGEFL  112 (557)
Q Consensus        48 ~~~~l~sgs~Dg~i~iwd~~~~~~~~-----~l~~h~~~V~~l~~~~--------~~-~l~sgs~dg~I~vwd-~~~~~~  112 (557)
                      .+.+|++++.|++|+|||+.+++...     .+.+|...|++++|+|        ++ +|++|+.|++|+||| .++.++
T Consensus       100 ~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~  179 (393)
T 4gq1_A          100 YSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPI  179 (393)
T ss_dssp             EEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEE
T ss_pred             CCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCcee
Confidence            34579999999999999998886543     3578999999999987        55 899999999999999 466778


Q ss_pred             EEEeCCCCCEEEEEEeCCC--eEEEEECCCeEEEEECCCCeEEEEE-------------------------eCCCCcEEE
Q psy7057         113 KTLTGHTDCVRGLAVLNDT--DFVSCSNDASIRVWDSTTGKCVHTM-------------------------YGHPNFIYS  165 (557)
Q Consensus       113 ~~l~~h~~~V~~l~~~~~~--~lvs~s~Dg~I~vwd~~~~~~~~~~-------------------------~~h~~~V~~  165 (557)
                      ..+.+|...|.+++|+|++  .|++++.|++|++||+++++.....                         .+|...+.+
T Consensus       180 ~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~  259 (393)
T 4gq1_A          180 LAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLAN  259 (393)
T ss_dssp             EEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSE
T ss_pred             eeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeeccccccccee
Confidence            8888899999999999985  3779999999999999887654332                         356777888


Q ss_pred             EEE---cCCEEEEEeCCCeEEEEECCCC---ceEeeCCccEEE------------------EEEcCC--Cc-EEEEEcCC
Q psy7057         166 VAA---HGDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWA------------------VAILPN--SD-IVTGSSDG  218 (557)
Q Consensus       166 l~~---~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~------------------v~~~p~--g~-l~sg~~Dg  218 (557)
                      +.+   ++..|++++.|+++++||+...   ..+..+...+..                  +.++|.  +. +++|+.||
T Consensus       260 v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg  339 (393)
T 4gq1_A          260 VRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHG  339 (393)
T ss_dssp             EEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTT
T ss_pred             eeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCC
Confidence            887   6789999999999999997543   333333333333                  233432  22 45677899


Q ss_pred             cEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEe
Q psy7057         219 IVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFS  269 (557)
Q Consensus       219 ~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~  269 (557)
                      +|++||+.++.....  ...+...|..+.+.++.. .+++++.||. .+|.
T Consensus       340 ~V~lwd~~~~~~~~~--~~~~~~~V~svafspdG~-~LA~as~~Gv-~lvr  386 (393)
T 4gq1_A          340 LIQLINTYEKDSNSI--PIQLGMPIVDFCWHQDGS-HLAIATEGSV-LLTR  386 (393)
T ss_dssp             EEEEEETTCTTCCEE--EEECSSCEEEEEECTTSS-EEEEEESSEE-EEEE
T ss_pred             EEEEEECCCCcEEEE--ecCCCCcEEEEEEcCCCC-EEEEEeCCCe-EEEE
Confidence            999999988765432  334667899999988766 4677777764 4443

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=99.93  E-value=2.6e-25  Score=225.32  Aligned_cols=227  Identities=16%  Similarity=0.137  Sum_probs=189.0

Q ss_pred             CCCCCCCCEEEEEECCCeEEEEECCCCe---EEEEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEeC-CCcEEEEEe
Q psy7057          43 LSPGAKVNTLLSASWDMTAKLWCLESQQ---CKLTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHSE-EGEFLKTLT  116 (557)
Q Consensus        43 ~~~~~~~~~l~sgs~Dg~i~iwd~~~~~---~~~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~-~~~~~~~l~  116 (557)
                      +++++++.+|++++.|+.|++|++.+++   ....+..|...|.+++|+|++  .|++|+.|+.|++||. .......+.
T Consensus        17 ~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~   96 (342)
T 1yfq_A           17 IKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALT   96 (342)
T ss_dssp             EEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECB
T ss_pred             EEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCceEecc
Confidence            3456678999999999999999998876   455566899999999999876  5999999999999998 877778888


Q ss_pred             C--CCCCEEEEEEeCCCeEEEEECCCeEEEEECCC---------CeEEEEEeCCCCcEEEEEEcCCEEEEEeCCCeEEEE
Q psy7057         117 G--HTDCVRGLAVLNDTDFVSCSNDASIRVWDSTT---------GKCVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVY  185 (557)
Q Consensus       117 ~--h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~---------~~~~~~~~~h~~~V~~l~~~~~~l~s~s~Dg~I~iw  185 (557)
                      +  |...|.+++|+|...+++++.|+.|++||+++         ++++..+. |...|.+++++++.+++++.|+.|++|
T Consensus        97 ~~~~~~~v~~l~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~l~~~~~d~~i~i~  175 (342)
T 1yfq_A           97 NNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSRLIVGMNNSQVQWF  175 (342)
T ss_dssp             SCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSEEEEEESTTEEEEE
T ss_pred             ccCCCCceEEEEeCCCCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCCcEEEEeCCCeEEEE
Confidence            9  99999999999944588999999999999987         66666666 899999999977779999999999999


Q ss_pred             ECCC-C-----ceEeeCCccEEEEEEcC-CCc-EEEEEcCCcEEEEecCCC------CcchhHHHhcc---------cce
Q psy7057         186 QNKA-Q-----NSFMIPAMSVWAVAILP-NSD-IVTGSSDGIVRVFSANPD------RQAEDAVQAQY---------AEE  242 (557)
Q Consensus       186 d~~~-~-----~~~~~~~~~v~~v~~~p-~g~-l~sg~~Dg~I~iwd~~~~------~~~~~~~~~~~---------~~~  242 (557)
                      |++. .     .....+...+.+++|+| ++. +++++.||.|++|+++..      ...  .....+         ...
T Consensus       176 d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  253 (342)
T 1yfq_A          176 RLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKR--FAFRCHRLNLKDTNLAYP  253 (342)
T ss_dssp             ESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTC--EEEECCCCCTTCCSSCCC
T ss_pred             ECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccc--eeeeccccccccccccee
Confidence            9877 3     23345677899999999 888 899999999999999875      222  122223         337


Q ss_pred             eEEEeccCCCceeEEEEeCCCcEEEEecCCC
Q psy7057         243 VKKLKSANEQEIGGVKVSDDGIVRVFSANPD  273 (557)
Q Consensus       243 v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~  273 (557)
                      +..+.+.+... .+++++.||.|++|++...
T Consensus       254 i~~~~~s~~~~-~l~~~~~dg~i~vwd~~~~  283 (342)
T 1yfq_A          254 VNSIEFSPRHK-FLYTAGSDGIISCWNLQTR  283 (342)
T ss_dssp             EEEEEECTTTC-CEEEEETTSCEEEEETTTT
T ss_pred             EEEEEEcCCCC-EEEEecCCceEEEEcCccH
Confidence            88888877544 5899999999999998754

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=99.93  E-value=7.4e-25  Score=247.69  Aligned_cols=229  Identities=16%  Similarity=0.173  Sum_probs=192.3

Q ss_pred             CCCCCCCCEEEEEECCCeEEEEECC--CCeEEEEEcccCCcEEEEEEcCC--C-EEEEEECCCeEEEEeC-CCc--EEEE
Q psy7057          43 LSPGAKVNTLLSASWDMTAKLWCLE--SQQCKLTIRQHEMAVWGVIQLAN--G-IIVTGCADKTIKLHSE-EGE--FLKT  114 (557)
Q Consensus        43 ~~~~~~~~~l~sgs~Dg~i~iwd~~--~~~~~~~l~~h~~~V~~l~~~~~--~-~l~sgs~dg~I~vwd~-~~~--~~~~  114 (557)
                      +.+++++++|++|+.||+|++|++.  +++....+.+|...|++++|+++  + .|++|+.||.|++||. ++.  .+..
T Consensus        15 l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~   94 (753)
T 3jro_A           15 AVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAV   94 (753)
T ss_dssp             ECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEE
T ss_pred             EEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCccccccc
Confidence            4577889999999999999999998  55778889999999999999886  6 9999999999999994 443  6778


Q ss_pred             EeCCCCCEEEEEEeCC--Ce-EEEEECCCeEEEEECCCC--eEEEEEeCCCCcEEEEEEc---------------CCEEE
Q psy7057         115 LTGHTDCVRGLAVLND--TD-FVSCSNDASIRVWDSTTG--KCVHTMYGHPNFIYSVAAH---------------GDLIT  174 (557)
Q Consensus       115 l~~h~~~V~~l~~~~~--~~-lvs~s~Dg~I~vwd~~~~--~~~~~~~~h~~~V~~l~~~---------------~~~l~  174 (557)
                      +.+|...|++++|+|+  +. +++|+.||+|++||++++  .....+.+|...|.+++++               +..++
T Consensus        95 ~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~  174 (753)
T 3jro_A           95 HAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFV  174 (753)
T ss_dssp             ECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEE
T ss_pred             ccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEE
Confidence            8899999999999998  55 779999999999999877  3455677899999999993               56899


Q ss_pred             EEeCCCeEEEEECCCC-------ceEeeCCccEEEEEEcCC---Cc-EEEEEcCCcEEEEecCCCCcc---hhHHHhccc
Q psy7057         175 SGGEDQCVCVYQNKAQ-------NSFMIPAMSVWAVAILPN---SD-IVTGSSDGIVRVFSANPDRQA---EDAVQAQYA  240 (557)
Q Consensus       175 s~s~Dg~I~iwd~~~~-------~~~~~~~~~v~~v~~~p~---g~-l~sg~~Dg~I~iwd~~~~~~~---~~~~~~~~~  240 (557)
                      +|+.||+|++||++..       ..+..|...|++++|+|+   +. +++++.||.|++|++......   .......+.
T Consensus       175 sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~  254 (753)
T 3jro_A          175 TGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFP  254 (753)
T ss_dssp             EEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCS
T ss_pred             EEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCC
Confidence            9999999999996543       355678899999999999   77 899999999999999876321   122233466


Q ss_pred             ceeEEEeccCCCceeEEEEeCCCcEEEEecCC
Q psy7057         241 EEVKKLKSANEQEIGGVKVSDDGIVRVFSANP  272 (557)
Q Consensus       241 ~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~  272 (557)
                      ..+..+.+.+... .+++++.||.|++|++..
T Consensus       255 ~~v~~l~~spdg~-~l~s~s~Dg~I~vwd~~~  285 (753)
T 3jro_A          255 DVLWRASWSLSGN-VLALSGGDNKVTLWKENL  285 (753)
T ss_dssp             SCCCCEEECTTTC-CEEEECSSSCEECCBCCS
T ss_pred             CceEEEEEcCCCC-EEEEEcCCCEEEEEecCC
Confidence            7788888877654 689999999999999985

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.93  E-value=3.7e-25  Score=235.53  Aligned_cols=208  Identities=11%  Similarity=0.061  Sum_probs=178.1

Q ss_pred             EeccCcccEEEEEEcCCCcEEEEECCCcEEEEcCCC--------------CCCCCCCCEEEEEECCCeEEEEECCCCeEE
Q psy7057           7 ALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPND--------------LSPGAKVNTLLSASWDMTAKLWCLESQQCK   72 (557)
Q Consensus         7 ~l~gH~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~--------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~   72 (557)
                      .+.+|...|++++|+|+|      .++++.+|+.+.              ++++|++..|++++.||+|++|+.++  ++
T Consensus        47 ~l~gh~~~v~~V~FsPdg------~~~~~~~~~~~~~~~~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l  118 (588)
T 2j04_A           47 DINCNSKNLFHVKEFPLE------FENKLDFELAQQNGLLNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--ML  118 (588)
T ss_dssp             CCSSBGGGTEEEEEECCC------CCCTTTTSCCCSSCSSTTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EE
T ss_pred             eecCCCccEEEEEECCCC------CcceEEEEeCCCceEeecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--ee
Confidence            457999999999999998      677777776552              77889999999999999999999544  66


Q ss_pred             EEEcccCC-----cEEEEEEcCCC-EEEEEECCCeEEEEeCCCc--------EEEEE----eCCCCCEEEEEEeCCCeEE
Q psy7057          73 LTIRQHEM-----AVWGVIQLANG-IIVTGCADKTIKLHSEEGE--------FLKTL----TGHTDCVRGLAVLNDTDFV  134 (557)
Q Consensus        73 ~~l~~h~~-----~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~--------~~~~l----~~h~~~V~~l~~~~~~~lv  134 (557)
                      ..+. |..     .|.+++|+|+| .|++|+.||+|++||..+.        .+.++    .+|...|.+++|+|++ ++
T Consensus       119 ~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-La  196 (588)
T 2j04_A          119 TNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LV  196 (588)
T ss_dssp             EECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-EE
T ss_pred             eecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc-EE
Confidence            6667 665     49999999999 9999999999999995544        35776    6788899999999999 99


Q ss_pred             EEECCCeEEEEECCCCe---EEEEEe-CCCCcEEEEEEcCCEEEEEeCCCeEEEEECCCC--ceEe-eCCccEEEEEE--
Q psy7057         135 SCSNDASIRVWDSTTGK---CVHTMY-GHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQ--NSFM-IPAMSVWAVAI--  205 (557)
Q Consensus       135 s~s~Dg~I~vwd~~~~~---~~~~~~-~h~~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~~--~~~~-~~~~~v~~v~~--  205 (557)
                      +++.|++|++||+.+++   ..+++. +|...|.+++|.+..|++++ +++|++||....  ..+. +|...++++++  
T Consensus       197 ass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFsg~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~  275 (588)
T 2j04_A          197 AALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIVDYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNH  275 (588)
T ss_dssp             EEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEETTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETT
T ss_pred             EEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEECCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeee
Confidence            99999999999998777   345674 78899999999878888887 699999997766  2444 78899999999  


Q ss_pred             cCCCc-EEEEEcCCcEEEEecC
Q psy7057         206 LPNSD-IVTGSSDGIVRVFSAN  226 (557)
Q Consensus       206 ~p~g~-l~sg~~Dg~I~iwd~~  226 (557)
                      +|++. ++++++||+ ++|..+
T Consensus       276 s~d~~~La~a~edG~-klw~~d  296 (588)
T 2j04_A          276 EKESTILLMSNKTSY-KVLLED  296 (588)
T ss_dssp             CSSCEEEEECSSCEE-EEEESS
T ss_pred             CCCCCEEEEEcCCCC-EEEeec
Confidence            99998 888999999 999987

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=99.93  E-value=1.4e-23  Score=220.35  Aligned_cols=263  Identities=12%  Similarity=0.100  Sum_probs=204.7

Q ss_pred             EEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC---------------------CCCCCCCCEEEEEECCCe
Q psy7057           3 KLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND---------------------LSPGAKVNTLLSASWDMT   60 (557)
Q Consensus         3 kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~---------------------~~~~~~~~~l~sgs~Dg~   60 (557)
                      +....+..|. .+.+++|+|++. +++++.+++|++||+.+                     +.+++++..+++++.|+.
T Consensus       114 ~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~  192 (433)
T 3bws_A          114 RFISRFKTGF-QPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANA  192 (433)
T ss_dssp             EEEEEEECSS-CBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTE
T ss_pred             eEEEEEcCCC-CceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCE
Confidence            4555666554 456999999777 56777889999999875                     344567889999999999


Q ss_pred             EEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EE-EEEECCCeEEEEeC-CCcEEEEEeCCCCCEEEEEEeCCCe-EEEE
Q psy7057          61 AKLWCLESQQCKLTIRQHEMAVWGVIQLANG-II-VTGCADKTIKLHSE-EGEFLKTLTGHTDCVRGLAVLNDTD-FVSC  136 (557)
Q Consensus        61 i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l-~sgs~dg~I~vwd~-~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~  136 (557)
                      |++||+.+++.+..+..|...+.+++|+|++ .+ ++++.|+.|++||. +++.+..+.. ...+.+++++|++. ++++
T Consensus       193 v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~~g~~l~~~  271 (433)
T 3bws_A          193 VHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDK-IGLPRGLLLSKDGKELYIA  271 (433)
T ss_dssp             EEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCC-CSEEEEEEECTTSSEEEEE
T ss_pred             EEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecC-CCCceEEEEcCCCCEEEEE
Confidence            9999999999999999999999999999988 55 55668999999995 5666666654 45699999999985 6666


Q ss_pred             E--------CCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCC-EEEEEeCCCeEEEEECCCCc--eEeeCCccEEEE
Q psy7057         137 S--------NDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGD-LITSGGEDQCVCVYQNKAQN--SFMIPAMSVWAV  203 (557)
Q Consensus       137 s--------~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~-~l~s~s~Dg~I~iwd~~~~~--~~~~~~~~v~~v  203 (557)
                      +        .|+.|++||+++++.+..+ .|...+.++++  +++ .+++++.|+.|++||..+..  ....+...+.++
T Consensus       272 ~~~~~~~~~~dg~i~~~d~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~  350 (433)
T 3bws_A          272 QFSASNQESGGGRLGIYSMDKEKLIDTI-GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPVFDKPNTI  350 (433)
T ss_dssp             EEESCTTCSCCEEEEEEETTTTEEEEEE-EEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEE
T ss_pred             ECCCCccccCCCeEEEEECCCCcEEeec-cCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecCCCCCCeE
Confidence            6        5889999999999887766 46668889998  555 45677899999999987662  223456789999


Q ss_pred             EEcCCCc-EEEEEc---------------CCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEE
Q psy7057         204 AILPNSD-IVTGSS---------------DGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRV  267 (557)
Q Consensus       204 ~~~p~g~-l~sg~~---------------Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~Irv  267 (557)
                      +|+|+++ +++++.               ||.|++||..+.+......   ....+..+.+.+.....+++++.||.|++
T Consensus       351 ~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~---~~~~~~~~~~s~dg~~l~~~~~~d~~i~v  427 (433)
T 3bws_A          351 ALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWE---AGNQPTGLDVSPDNRYLVISDFLDHQIRV  427 (433)
T ss_dssp             EECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEE---CSSSEEEEEECTTSCEEEEEETTTTEEEE
T ss_pred             EEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEec---CCCCCceEEEcCCCCEEEEEECCCCeEEE
Confidence            9999998 666665               5799999998776543222   13456777777776654445556999999


Q ss_pred             EecC
Q psy7057         268 FSAN  271 (557)
Q Consensus       268 W~~~  271 (557)
                      |+++
T Consensus       428 ~~~~  431 (433)
T 3bws_A          428 YRRD  431 (433)
T ss_dssp             EEET
T ss_pred             EEec
Confidence            9976

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=99.93  E-value=8.6e-25  Score=227.97  Aligned_cols=206  Identities=8%  Similarity=0.071  Sum_probs=147.4

Q ss_pred             EcCCCc-EEEEECCCcEEEEcCCC---------------------CCCCC--------CCCEEEEEECCCeEEEEECCCC
Q psy7057          20 VTPDGC-ILSASRDKSAKLWKPND---------------------LSPGA--------KVNTLLSASWDMTAKLWCLESQ   69 (557)
Q Consensus        20 ~spdg~-l~sgs~Dg~V~iWd~~~---------------------~~~~~--------~~~~l~sgs~Dg~i~iwd~~~~   69 (557)
                      +++++. |++++.|++|+|||...                     ++++|        ++++|++|+.|++|+|||+.++
T Consensus        97 ~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~  176 (393)
T 4gq1_A           97 SPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDE  176 (393)
T ss_dssp             CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETT
T ss_pred             cCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCC
Confidence            334445 88999999999998754                     33433        5789999999999999999999


Q ss_pred             eEEEEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEeCC-CcEEE-------------------------EEeCCCCC
Q psy7057          70 QCKLTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHSEE-GEFLK-------------------------TLTGHTDC  121 (557)
Q Consensus        70 ~~~~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~~-~~~~~-------------------------~l~~h~~~  121 (557)
                      .++..+..|...|.+++|+|++  +|++|+.|++|++||.. +....                         ...+|...
T Consensus       177 ~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~  256 (393)
T 4gq1_A          177 GPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASS  256 (393)
T ss_dssp             EEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSS
T ss_pred             ceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeeccccccc
Confidence            8888888999999999999976  79999999999999943 22211                         12467888


Q ss_pred             EEEEEEe-CCCe-EEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEE------------------E----cCCEEEEEe
Q psy7057         122 VRGLAVL-NDTD-FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVA------------------A----HGDLITSGG  177 (557)
Q Consensus       122 V~~l~~~-~~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~------------------~----~~~~l~s~s  177 (557)
                      |.++.|. +++. +++++.|+++++||+.+++....+..|...+..+.                  +    ++.++++|+
T Consensus       257 v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs  336 (393)
T 4gq1_A          257 LANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHS  336 (393)
T ss_dssp             CSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEET
T ss_pred             ceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEEC
Confidence            9999987 5655 78999999999999998877777666654443332                  1    223567888


Q ss_pred             CCCeEEEEECCCC---ceEeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecC
Q psy7057         178 EDQCVCVYQNKAQ---NSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSAN  226 (557)
Q Consensus       178 ~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~  226 (557)
                      .|++|++||..+.   ..+..|..+|++++|+|+|+ |++++.+| +.+|.+.
T Consensus       337 ~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL~  388 (393)
T 4gq1_A          337 QHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRLM  388 (393)
T ss_dssp             TTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEEG
T ss_pred             CCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEEe
Confidence            9999999997654   55667888999999999999 66666555 6666553

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=99.93  E-value=3.7e-24  Score=226.90  Aligned_cols=218  Identities=18%  Similarity=0.180  Sum_probs=180.7

Q ss_pred             eccCcccEEEEEEcCCCc-E-EEEECCCcEEEEcCC--C------------------CCCCCCCCEEEEEECCCeEEEEE
Q psy7057           8 LYGHSMDVRSLSVTPDGC-I-LSASRDKSAKLWKPN--D------------------LSPGAKVNTLLSASWDMTAKLWC   65 (557)
Q Consensus         8 l~gH~~~V~~l~~spdg~-l-~sgs~Dg~V~iWd~~--~------------------~~~~~~~~~l~sgs~Dg~i~iwd   65 (557)
                      +.+|.+.|++++|+|+++ | ++|+.||+|++||+.  +                  +.+++++.+|++|+.++.+++|+
T Consensus        98 ~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~  177 (450)
T 2vdu_B           98 APPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSID  177 (450)
T ss_dssp             --CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred             CCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEe
Confidence            356888999999999998 5 788899999999988  3                  56788899999999999999999


Q ss_pred             CCCCeEEE----EEcccCCcEEEEEEcCC---C-EEEEEECCCeEEEEe-CCCcEEEE-EeCCCCCEEEEEEeCCCe-EE
Q psy7057          66 LESQQCKL----TIRQHEMAVWGVIQLAN---G-IIVTGCADKTIKLHS-EEGEFLKT-LTGHTDCVRGLAVLNDTD-FV  134 (557)
Q Consensus        66 ~~~~~~~~----~l~~h~~~V~~l~~~~~---~-~l~sgs~dg~I~vwd-~~~~~~~~-l~~h~~~V~~l~~~~~~~-lv  134 (557)
                      +.+++...    .+.+|...|.+++|+|+   + .|++|+.|++|++|| .++.++.. +.+|...|++++|+ ++. |+
T Consensus       178 ~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~  256 (450)
T 2vdu_B          178 INSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLL  256 (450)
T ss_dssp             TTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEE
T ss_pred             cCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEE
Confidence            98876443    67889999999999999   8 999999999999999 45666766 56899999999999 765 77


Q ss_pred             EEECCCeEEEEECCCCeEEEEEeCC-------------------------CCcEEEEEE--cCCEEEEEe-CCCeEEEEE
Q psy7057         135 SCSNDASIRVWDSTTGKCVHTMYGH-------------------------PNFIYSVAA--HGDLITSGG-EDQCVCVYQ  186 (557)
Q Consensus       135 s~s~Dg~I~vwd~~~~~~~~~~~~h-------------------------~~~V~~l~~--~~~~l~s~s-~Dg~I~iwd  186 (557)
                      +++.|++|++||+++++++..+..+                         ...|.++++  ++++|++++ .|+.|++|+
T Consensus       257 s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~  336 (450)
T 2vdu_B          257 SAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILE  336 (450)
T ss_dssp             EEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEE
T ss_pred             EEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEE
Confidence            9999999999999999999888632                         356888888  678899888 899999999


Q ss_pred             C--CCC------ceEeeCCccEEEEEEcCCCcEEEEEc-------CCcEEEEecCC
Q psy7057         187 N--KAQ------NSFMIPAMSVWAVAILPNSDIVTGSS-------DGIVRVFSANP  227 (557)
Q Consensus       187 ~--~~~------~~~~~~~~~v~~v~~~p~g~l~sg~~-------Dg~I~iwd~~~  227 (557)
                      +  ...      ..+..+ ..|++++|+|++.+++.+.       +..|++|.++.
T Consensus       337 ~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~  391 (450)
T 2vdu_B          337 MSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNL  391 (450)
T ss_dssp             ECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEET
T ss_pred             eccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEc
Confidence            8  322      344555 7899999999655555443       45588887653

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=99.92  E-value=1.6e-23  Score=213.39  Aligned_cols=229  Identities=18%  Similarity=0.223  Sum_probs=183.7

Q ss_pred             CCCCCC---CCEEEEEECCCeEEEEECCC-CeEE-EEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcEEEEEe
Q psy7057          43 LSPGAK---VNTLLSASWDMTAKLWCLES-QQCK-LTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFLKTLT  116 (557)
Q Consensus        43 ~~~~~~---~~~l~sgs~Dg~i~iwd~~~-~~~~-~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~~~l~  116 (557)
                      ++++++   +.+|++|+.|+.|++|++.+ +..+ ..+.+|...|.+++|+|++ .|++++.|+.|++||........+.
T Consensus        45 ~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~  124 (368)
T 3mmy_A           45 LSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIA  124 (368)
T ss_dssp             EEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred             EEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceeec
Confidence            667777   59999999999999999987 5544 7888999999999999988 9999999999999997666666677


Q ss_pred             CCCCCEEEEEE--eCCCe-EEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEEcCCEEEEEeCCCeEEEEECCCC-ce
Q psy7057         117 GHTDCVRGLAV--LNDTD-FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQ-NS  192 (557)
Q Consensus       117 ~h~~~V~~l~~--~~~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~~-~~  192 (557)
                      .|...|++++|  ++++. |++++.|+.|++||+++++++..+..|. .+.++.+.+..+++++.++.+++|++... ..
T Consensus       125 ~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  203 (368)
T 3mmy_A          125 QHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE-RCYCADVIYPMAVVATAERGLIVYQLENQPSE  203 (368)
T ss_dssp             ECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSS-CEEEEEEETTEEEEEEGGGCEEEEECSSSCEE
T ss_pred             cccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCC-CceEEEecCCeeEEEeCCCcEEEEEeccccch
Confidence            89999999999  78876 7799999999999999999998888664 67788888889999999999999998765 22


Q ss_pred             Ee----eCCccEEEEEEcCCCc-----EEEEEcCCcEEEEecCCCCc-chhHHHhcccc------------eeEEEeccC
Q psy7057         193 FM----IPAMSVWAVAILPNSD-----IVTGSSDGIVRVFSANPDRQ-AEDAVQAQYAE------------EVKKLKSAN  250 (557)
Q Consensus       193 ~~----~~~~~v~~v~~~p~g~-----l~sg~~Dg~I~iwd~~~~~~-~~~~~~~~~~~------------~v~~l~~~~  250 (557)
                      +.    .+...+.++++.++..     +++++.||.|++|+++.... ........+..            .+..+.+.+
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp  283 (368)
T 3mmy_A          204 FRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHP  283 (368)
T ss_dssp             EEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECT
T ss_pred             hhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEec
Confidence            21    1234556666655432     89999999999999987643 11112222322            588888877


Q ss_pred             CCceeEEEEeCCCcEEEEecCCC
Q psy7057         251 EQEIGGVKVSDDGIVRVFSANPD  273 (557)
Q Consensus       251 ~~~~~~vs~s~DG~IrvW~~~~~  273 (557)
                      .. ..+++++.||.|++|++...
T Consensus       284 ~~-~~l~s~~~dg~i~iwd~~~~  305 (368)
T 3mmy_A          284 VH-GTLATVGSDGRFSFWDKDAR  305 (368)
T ss_dssp             TT-CCEEEEETTSCEEEEETTTT
T ss_pred             CC-CEEEEEccCCeEEEEECCCC
Confidence            55 46899999999999998754

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=99.92  E-value=3.7e-24  Score=218.47  Aligned_cols=224  Identities=12%  Similarity=0.031  Sum_probs=172.7

Q ss_pred             CCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCCEEEEEECCCeEEEEeCCC----------cEEE
Q psy7057          44 SPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEG----------EFLK  113 (557)
Q Consensus        44 ~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~~~----------~~~~  113 (557)
                      +...++..|++|+.||+|++||+.+++.+..+.  ...|.++.++|.  +++++.|++|++|+..+          ..+.
T Consensus        43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~--~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~  118 (343)
T 3lrv_A           43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA--IISRGPCNRLLLLYPGNQITILDSKTNKVLR  118 (343)
T ss_dssp             SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS--EEEECSTTEEEEEETTTEEEEEETTTCCEEE
T ss_pred             hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc--eEEecCCCeEEEEEccCceEEeecCCcceeE
Confidence            344467899999999999999999998887776  456777888888  99999999999997443          3344


Q ss_pred             EEe-CCCCCEEEEEEeC--CCe-EEEEECCCeEEEEECCCCeEEEEEeC-CCCcEEEEEE--cCCEEEEEeCCCeEEEEE
Q psy7057         114 TLT-GHTDCVRGLAVLN--DTD-FVSCSNDASIRVWDSTTGKCVHTMYG-HPNFIYSVAA--HGDLITSGGEDQCVCVYQ  186 (557)
Q Consensus       114 ~l~-~h~~~V~~l~~~~--~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~-h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd  186 (557)
                      .+. +|...|.+++++|  ++. +++++.|++|++||+++++++..+.. |...+.+++|  ++.+|++|+.|+.|++||
T Consensus       119 ~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd  198 (343)
T 3lrv_A          119 EIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYN  198 (343)
T ss_dssp             EEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEE
T ss_pred             EeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEE
Confidence            444 6778999999999  766 77999999999999999999777744 5568999999  678999999999999999


Q ss_pred             CCCC----ceEee-CCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHH-Hhccccee--EEEeccCCCceeEE
Q psy7057         187 NKAQ----NSFMI-PAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAV-QAQYAEEV--KKLKSANEQEIGGV  257 (557)
Q Consensus       187 ~~~~----~~~~~-~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~-~~~~~~~v--~~l~~~~~~~~~~v  257 (557)
                      +++.    ..+.. |...|.+++|+|++. |++++ |+.|++||++......... ...+...+  ..+.+.+... .++
T Consensus       199 ~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~l~  276 (343)
T 3lrv_A          199 LSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGK-NMI  276 (343)
T ss_dssp             SSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSS-EEE
T ss_pred             CCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCC-EEE
Confidence            8765    24566 889999999999999 77777 5599999998765432111 00111122  2466665544 567


Q ss_pred             EEeC-CCcEEEEecCCC
Q psy7057         258 KVSD-DGIVRVFSANPD  273 (557)
Q Consensus       258 s~s~-DG~IrvW~~~~~  273 (557)
                      +++. |+.|+||+++..
T Consensus       277 ~~s~~d~~i~v~~~~~~  293 (343)
T 3lrv_A          277 AYSNESNSLTIYKFDKK  293 (343)
T ss_dssp             EEETTTTEEEEEEECTT
T ss_pred             EecCCCCcEEEEEEccc
Confidence            7777 999999998654

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=99.92  E-value=8.9e-23  Score=211.11  Aligned_cols=244  Identities=12%  Similarity=0.122  Sum_probs=193.1

Q ss_pred             EEEEECCCcEEEEcCCC---------------CCCCCCCCEE-EEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcC
Q psy7057          26 ILSASRDKSAKLWKPND---------------LSPGAKVNTL-LSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLA   89 (557)
Q Consensus        26 l~sgs~Dg~V~iWd~~~---------------~~~~~~~~~l-~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~   89 (557)
                      +++++.|++|++||+.+               +.+++++..| ++++.|++|++||+.+++.+..+..+. .+.+++|+|
T Consensus         5 ~vs~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~sp   83 (391)
T 1l0q_A            5 YIANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSP   83 (391)
T ss_dssp             EEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECT
T ss_pred             EEEcCCCCEEEEEECCCCeEEEEeecCCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECC
Confidence            67889999999999876               5777888876 667799999999999999988887665 899999999


Q ss_pred             CC-EE-EEEECCCeEEEEeC-CCcEEEEEeCCCCCEEEEEEeCCCe-E-EEEECCCeEEEEECCCCeEEEEEeCCCCcEE
Q psy7057          90 NG-II-VTGCADKTIKLHSE-EGEFLKTLTGHTDCVRGLAVLNDTD-F-VSCSNDASIRVWDSTTGKCVHTMYGHPNFIY  164 (557)
Q Consensus        90 ~~-~l-~sgs~dg~I~vwd~-~~~~~~~l~~h~~~V~~l~~~~~~~-l-vs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~  164 (557)
                      ++ .| ++++.++.|++||. +++.+..+.. ...+.+++|+|++. + ++++.|+.|++||+.+++.+..+..| ..+.
T Consensus        84 dg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~  161 (391)
T 1l0q_A           84 DGKQVYVTNMASSTLSVIDTTSNTVAGTVKT-GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSPK  161 (391)
T ss_dssp             TSSEEEEEETTTTEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSEE
T ss_pred             CCCEEEEEECCCCEEEEEECCCCeEEEEEeC-CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-CCcc
Confidence            88 45 55567799999995 4555666654 45789999999976 4 58888999999999999999888765 4568


Q ss_pred             EEEE--cCCEE-EEEeCCCeEEEEECCCCc--eEeeCCccEEEEEEcCCCc-EEEEE---cCCcEEEEecCCCCcchhHH
Q psy7057         165 SVAA--HGDLI-TSGGEDQCVCVYQNKAQN--SFMIPAMSVWAVAILPNSD-IVTGS---SDGIVRVFSANPDRQAEDAV  235 (557)
Q Consensus       165 ~l~~--~~~~l-~s~s~Dg~I~iwd~~~~~--~~~~~~~~v~~v~~~p~g~-l~sg~---~Dg~I~iwd~~~~~~~~~~~  235 (557)
                      ++++  +++.+ ++++.++.|++||+++..  ....+...+.+++|+|+++ +++++   .++.|++||+.+.+......
T Consensus       162 ~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~  241 (391)
T 1l0q_A          162 GIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIP  241 (391)
T ss_dssp             EEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEE
T ss_pred             eEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEe
Confidence            8888  56666 677889999999987762  2334556889999999998 66666   68999999998775443221


Q ss_pred             HhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCChh
Q psy7057         236 QAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQ  275 (557)
Q Consensus       236 ~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~~~  275 (557)
                        . ...+..+.+.+.....+++++.|+.|++|++..++.
T Consensus       242 --~-~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~  278 (391)
T 1l0q_A          242 --V-GPDPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTI  278 (391)
T ss_dssp             --C-CSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred             --c-CCCccEEEEccCCCEEEEEcCCCCEEEEEECCCCcE
Confidence              1 223566777777776668889999999999887543

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=99.92  E-value=2.1e-23  Score=219.89  Aligned_cols=204  Identities=22%  Similarity=0.272  Sum_probs=160.1

Q ss_pred             EEEeccCcccEEEEEEcCCCc--EEEEECCCcEEEEcCCCCCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcE
Q psy7057           5 STALYGHSMDVRSLSVTPDGC--ILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAV   82 (557)
Q Consensus         5 ~~~l~gH~~~V~~l~~spdg~--l~sgs~Dg~V~iWd~~~~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V   82 (557)
                      ...+.+|...|++|+|+|++.  |++|+.||+|++|++..-...           ...        ......+.+|...|
T Consensus       174 ~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~-----------~~~--------~~~~~~~~~h~~~v  234 (430)
T 2xyi_A          174 DLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKE-----------HRV--------IDAKNIFTGHTAVV  234 (430)
T ss_dssp             SEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBG-----------GGE--------EECSEEECCCSSCE
T ss_pred             cEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCC-----------Cce--------eccceeecCCCCCE
Confidence            456778888888888888754  455555555555555421000           000        01235677899999


Q ss_pred             EEEEEcC-CC-EEEEEECCCeEEEEeCC-C---cEEEEEeCCCCCEEEEEEeCCCe--EEEEECCCeEEEEECCC-CeEE
Q psy7057          83 WGVIQLA-NG-IIVTGCADKTIKLHSEE-G---EFLKTLTGHTDCVRGLAVLNDTD--FVSCSNDASIRVWDSTT-GKCV  153 (557)
Q Consensus        83 ~~l~~~~-~~-~l~sgs~dg~I~vwd~~-~---~~~~~l~~h~~~V~~l~~~~~~~--lvs~s~Dg~I~vwd~~~-~~~~  153 (557)
                      .+++|+| ++ .|++++.|+.|++||.. +   .++..+..|...|++++|+|++.  |++|+.|++|++||+++ ..++
T Consensus       235 ~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~  314 (430)
T 2xyi_A          235 EDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKL  314 (430)
T ss_dssp             EEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCS
T ss_pred             eeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCe
Confidence            9999999 44 89999999999999954 3   46778889999999999999864  77999999999999998 5678


Q ss_pred             EEEeCCCCcEEEEEE--cC-CEEEEEeCCCeEEEEECCC---------------C--ceEeeCCccEEEEEEcCCCc--E
Q psy7057         154 HTMYGHPNFIYSVAA--HG-DLITSGGEDQCVCVYQNKA---------------Q--NSFMIPAMSVWAVAILPNSD--I  211 (557)
Q Consensus       154 ~~~~~h~~~V~~l~~--~~-~~l~s~s~Dg~I~iwd~~~---------------~--~~~~~~~~~v~~v~~~p~g~--l  211 (557)
                      ..+..|...|.+++|  ++ .+|++++.|+.|++||+..               .  ..+..|...|++++|+|++.  +
T Consensus       315 ~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l  394 (430)
T 2xyi_A          315 HSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWII  394 (430)
T ss_dssp             EEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEE
T ss_pred             EEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEE
Confidence            899999999999999  44 4799999999999999654               1  23345777899999999987  7


Q ss_pred             EEEEcCCcEEEEecCC
Q psy7057         212 VTGSSDGIVRVFSANP  227 (557)
Q Consensus       212 ~sg~~Dg~I~iwd~~~  227 (557)
                      ++++.||.|+||++..
T Consensus       395 ~s~s~dg~i~iw~~~~  410 (430)
T 2xyi_A          395 CSVSEDNIMQVWQMAE  410 (430)
T ss_dssp             EEEETTSEEEEEEECH
T ss_pred             EEEECCCCEEEeEccc
Confidence            7899999999999874

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=99.91  E-value=1.4e-21  Score=201.98  Aligned_cols=224  Identities=16%  Similarity=0.187  Sum_probs=181.6

Q ss_pred             EEEEEeccCcccEEEEEEcCCCc-E-EEEECCCcEEEEcCCC---------------CCCCCCCCEEEEE-ECCCeEEEE
Q psy7057           3 KLSTALYGHSMDVRSLSVTPDGC-I-LSASRDKSAKLWKPND---------------LSPGAKVNTLLSA-SWDMTAKLW   64 (557)
Q Consensus         3 kl~~~l~gH~~~V~~l~~spdg~-l-~sgs~Dg~V~iWd~~~---------------~~~~~~~~~l~sg-s~Dg~i~iw   64 (557)
                      ++.+.+.+|. .+.+++|+|+++ | ++++.|++|++||+.+               +.+++++++|+.+ +.++.|++|
T Consensus        23 ~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~v~v~  101 (391)
T 1l0q_A           23 KVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVI  101 (391)
T ss_dssp             EEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred             eEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCCccceEECCCCCEEEEEECCCCEEEEE
Confidence            5667777775 589999999998 5 5777999999999876               6678888887554 467999999


Q ss_pred             ECCCCeEEEEEcccCCcEEEEEEcCCC-EE-EEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe-E-EEEECC
Q psy7057          65 CLESQQCKLTIRQHEMAVWGVIQLANG-II-VTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD-F-VSCSND  139 (557)
Q Consensus        65 d~~~~~~~~~l~~h~~~V~~l~~~~~~-~l-~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~-l-vs~s~D  139 (557)
                      |+.+++.+..+..| ..+.+++|+|++ .+ ++++.++.|++|| .+++.+..+..| ..+.+++|+|++. + ++++.+
T Consensus       102 d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~  179 (391)
T 1l0q_A          102 DTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGIAVTPDGTKVYVANFDS  179 (391)
T ss_dssp             ETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTT
T ss_pred             ECCCCeEEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-CCcceEEECCCCCEEEEEeCCC
Confidence            99999988888754 468999999988 45 7888899999999 456677777655 5579999999976 4 477889


Q ss_pred             CeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEe---CCCeEEEEECCCC---ceEeeCCccEEEEEEcCCCc-
Q psy7057         140 ASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGG---EDQCVCVYQNKAQ---NSFMIPAMSVWAVAILPNSD-  210 (557)
Q Consensus       140 g~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s---~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p~g~-  210 (557)
                      +.|++||+++++++..+. +...+.++++  ++++|++++   .++.|++||+.+.   ..+..+ ..+.+++|+|+++ 
T Consensus       180 ~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~  257 (391)
T 1l0q_A          180 MSISVIDTVTNSVIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVG-PDPAGIAVTPDGKK  257 (391)
T ss_dssp             TEEEEEETTTTEEEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSE
T ss_pred             CEEEEEECCCCeEEEEEe-cCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecC-CCccEEEEccCCCE
Confidence            999999999999888776 5667889998  677888777   6899999998766   333333 4688999999998 


Q ss_pred             E-EEEEcCCcEEEEecCCCCcc
Q psy7057         211 I-VTGSSDGIVRVFSANPDRQA  231 (557)
Q Consensus       211 l-~sg~~Dg~I~iwd~~~~~~~  231 (557)
                      + ++++.|+.|++||+.+++..
T Consensus       258 l~~s~~~d~~v~v~d~~~~~~~  279 (391)
T 1l0q_A          258 VYVALSFXNTVSVIDTATNTIT  279 (391)
T ss_dssp             EEEEETTTTEEEEEETTTTEEE
T ss_pred             EEEEcCCCCEEEEEECCCCcEE
Confidence            5 56778999999999876543

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=99.89  E-value=4.3e-21  Score=192.58  Aligned_cols=168  Identities=13%  Similarity=0.060  Sum_probs=122.2

Q ss_pred             CCCeEEEEe--CCCcEEEEEeCCCCCEEEEEEeC---CCe-EEEEECCCeEEEEECCCCeEEEEEeCCCC---cEEEEEE
Q psy7057          98 ADKTIKLHS--EEGEFLKTLTGHTDCVRGLAVLN---DTD-FVSCSNDASIRVWDSTTGKCVHTMYGHPN---FIYSVAA  168 (557)
Q Consensus        98 ~dg~I~vwd--~~~~~~~~l~~h~~~V~~l~~~~---~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~---~V~~l~~  168 (557)
                      .|+.|++|+  .+++.+..+.+|...++.++|++   ++. |+++|.|++|+|||+.++++++++.+|..   .+.+++|
T Consensus       155 ~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vaf  234 (356)
T 2w18_A          155 SDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAY  234 (356)
T ss_dssp             TTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEE
T ss_pred             CCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEE
Confidence            399999999  45788888889999999999988   444 77999999999999999999999987543   5666666


Q ss_pred             --cCCEE------------EEEeCCCeEEEEECCCCceEe--------eCCccEEEEEEcCCCc-EEEEEcCCcEEEEec
Q psy7057         169 --HGDLI------------TSGGEDQCVCVYQNKAQNSFM--------IPAMSVWAVAILPNSD-IVTGSSDGIVRVFSA  225 (557)
Q Consensus       169 --~~~~l------------~s~s~Dg~I~iwd~~~~~~~~--------~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~  225 (557)
                        ++.++            ++|+.|++|++||..+.+.+.        +|...+.+..++  +. +++++.|++|+|||+
T Consensus       235 SpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl  312 (356)
T 2w18_A          235 SEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDL  312 (356)
T ss_dssp             EETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEET
T ss_pred             CCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEEC
Confidence              55554            678899999999987764332        233334333333  44 788899999999999


Q ss_pred             CCCCcchhHHHhcccceeE-EEeccCCCceeEEEEeCCCcEEEEec
Q psy7057         226 NPDRQAEDAVQAQYAEEVK-KLKSANEQEIGGVKVSDDGIVRVFSA  270 (557)
Q Consensus       226 ~~~~~~~~~~~~~~~~~v~-~l~~~~~~~~~~vs~s~DG~IrvW~~  270 (557)
                      .+++....  +.+|...+. .+.+.++.. .+++||.|++||||++
T Consensus       313 ~tGk~l~t--L~gH~~~vvs~vafSPDG~-~LaSGS~D~TIklWd~  355 (356)
T 2w18_A          313 LLGQCTAL--LPPVSDQHWSFVKWSGTDS-HLLAGQKDGNIFVYHY  355 (356)
T ss_dssp             TTCSEEEE--ECCC--CCCCEEEECSSSS-EEEEECTTSCEEEEEE
T ss_pred             CCCcEEEE--ecCCCCCeEEEEEECCCCC-EEEEEECCCcEEEecC
Confidence            98876533  233444443 466766544 6899999999999985

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=99.89  E-value=5.2e-21  Score=200.60  Aligned_cols=219  Identities=12%  Similarity=0.071  Sum_probs=177.3

Q ss_pred             EeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEE-ECCCeEEEEECCC
Q psy7057           7 ALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSA-SWDMTAKLWCLES   68 (557)
Q Consensus         7 ~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sg-s~Dg~i~iwd~~~   68 (557)
                      .+.+|.+.|.+++|+|+++ +++++.|+.|++||+.+                +.+++++..++++ +.|+.|++||+.+
T Consensus       164 ~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~  243 (433)
T 3bws_A          164 KYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKT  243 (433)
T ss_dssp             HHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTT
T ss_pred             cccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCC
Confidence            3568999999999999998 77999999999999876                5667788888554 4799999999999


Q ss_pred             CeEEEEEcccCCcEEEEEEcCCC-EEEEEE--------CCCeEEEEeCCCcEEEEEeCCCCCEEEEEEeCCCe--EEEEE
Q psy7057          69 QQCKLTIRQHEMAVWGVIQLANG-IIVTGC--------ADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTD--FVSCS  137 (557)
Q Consensus        69 ~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs--------~dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~~~--lvs~s  137 (557)
                      ++.+..+..+ ..+.+++|+|++ .+++++        .|+.|++||...........|...+.+++|+|++.  +++++
T Consensus       244 ~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~  322 (433)
T 3bws_A          244 KLEIRKTDKI-GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDM  322 (433)
T ss_dssp             TEEEEECCCC-SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEET
T ss_pred             CcEEEEecCC-CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEec
Confidence            9988877754 468999999998 777777        58899999954433333345667899999999974  45778


Q ss_pred             CCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeC---------------CCeEEEEECCCCceE--eeCCc
Q psy7057         138 NDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGE---------------DQCVCVYQNKAQNSF--MIPAM  198 (557)
Q Consensus       138 ~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~---------------Dg~I~iwd~~~~~~~--~~~~~  198 (557)
                      .|+.|++||+.+++.+..+. +...+.++++  +++.+++++.               ||.|++||..+...+  .....
T Consensus       323 ~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~  401 (433)
T 3bws_A          323 CCSKIEVYDLKEKKVQKSIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGN  401 (433)
T ss_dssp             TTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSS
T ss_pred             CCCEEEEEECCCCcEEEEec-CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCCC
Confidence            99999999999999888876 7788999999  5777887776               579999998776222  22345


Q ss_pred             cEEEEEEcCCCc-EEEEEc-CCcEEEEecCC
Q psy7057         199 SVWAVAILPNSD-IVTGSS-DGIVRVFSANP  227 (557)
Q Consensus       199 ~v~~v~~~p~g~-l~sg~~-Dg~I~iwd~~~  227 (557)
                      .+.+++|+|+++ +++++. |+.|++|+++.
T Consensus       402 ~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~  432 (433)
T 3bws_A          402 QPTGLDVSPDNRYLVISDFLDHQIRVYRRDG  432 (433)
T ss_dssp             SEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred             CCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence            799999999998 666665 99999999863

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=99.89  E-value=1.2e-21  Score=201.24  Aligned_cols=221  Identities=13%  Similarity=0.093  Sum_probs=170.3

Q ss_pred             CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEe-CCCcEEEEEeCCC
Q psy7057          43 LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHS-EEGEFLKTLTGHT  119 (557)
Q Consensus        43 ~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd-~~~~~~~~l~~h~  119 (557)
                      +++++++.+|++|+.++ +++|++.+++.......+  .+..+.+.+++  .+++|+.|++|++|| .+++++..+. |.
T Consensus        25 v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~-~~  100 (355)
T 3vu4_A           25 YEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEMR--HLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK-VD  100 (355)
T ss_dssp             EEECTTSSEEEEECSSE-EEEEEETTEEEEEEEECS--CCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE-CS
T ss_pred             EEECCCCCEEEEEcCCE-EEEEecCCcceeeeeecC--CeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEE-CC
Confidence            56788899999988775 789999887766554433  46667777765  557788899999999 5677777776 67


Q ss_pred             CCEEEEEEeCCCeEEEEECCCeEEEEECCCC-eEEEEEeCCCCcEEEEEEcCCEEEE--EeCCCeEEEEECCC-------
Q psy7057         120 DCVRGLAVLNDTDFVSCSNDASIRVWDSTTG-KCVHTMYGHPNFIYSVAAHGDLITS--GGEDQCVCVYQNKA-------  189 (557)
Q Consensus       120 ~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~-~~~~~~~~h~~~V~~l~~~~~~l~s--~s~Dg~I~iwd~~~-------  189 (557)
                      ..|.+++++++..++ + .|+.|++||+.++ +.+.++..   ....+++....++.  |+.||.|++||+..       
T Consensus       101 ~~v~~v~~~~~~~~~-~-~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~  175 (355)
T 3vu4_A          101 APVKDLFLSREFIVV-S-YGDVISVFKFGNPWKRITDDIR---FGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQ  175 (355)
T ss_dssp             SCEEEEEECSSEEEE-E-ETTEEEEEESSTTCCBSSCCEE---EEEEEEEETTEEEEEESSCTTCEEEEECCC-------
T ss_pred             CceEEEEEcCCEEEE-E-EcCEEEEEECCCCceeeEEecc---CCceEEEEccEEEEeCCCcCcEEEEEECCCCCccccc
Confidence            799999998765333 3 4789999999987 66655554   22233334466666  57999999999775       


Q ss_pred             ------------CceEeeCCccEEEEEEcCCCc-EEEEEcCCc-EEEEecCCCCcchhHHHhcccceeEEEeccCCCcee
Q psy7057         190 ------------QNSFMIPAMSVWAVAILPNSD-IVTGSSDGI-VRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIG  255 (557)
Q Consensus       190 ------------~~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~-I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~  255 (557)
                                  ...+..|...|++++|+|++. |++|+.|++ |++||+.+++.........|...+..+.+.+... .
T Consensus       176 ~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~-~  254 (355)
T 3vu4_A          176 DQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGS-K  254 (355)
T ss_dssp             -----------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSC-E
T ss_pred             cccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCC-E
Confidence                        456778999999999999998 899999998 9999999877654332122778899999887655 5


Q ss_pred             EEEEeCCCcEEEEecCCC
Q psy7057         256 GVKVSDDGIVRVFSANPD  273 (557)
Q Consensus       256 ~vs~s~DG~IrvW~~~~~  273 (557)
                      +++++.||+|+||++...
T Consensus       255 l~s~s~d~~v~iw~~~~~  272 (355)
T 3vu4_A          255 LAVVSDKWTLHVFEIFND  272 (355)
T ss_dssp             EEEEETTCEEEEEESSCC
T ss_pred             EEEEECCCEEEEEEccCC
Confidence            899999999999998765

>2k89_A PLA2P, PLAP, phospholipase A-2-activating protein; ubiquitin binding, WD repeat, protein binding; NMR {Homo sapiens} PDB: 2k8a_A 2k8b_B 2k8c_B

Probab=99.88  E-value=2.1e-23  Score=158.73  Aligned_cols=70  Identities=56%  Similarity=1.082  Sum_probs=66.6

Q ss_pred             ccCCeeEecceeeeeEEEEecCCCCCcccCCCccCCChHHHHHHHHHHcCCChHHHHHHHHHHHhcCCCC
Q psy7057         359 ESSGKVLYQGKEYDFVFSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHLSQMFLEQVANFIMTNSKSK  428 (557)
Q Consensus       359 ~~~~~~~~~g~~~d~v~~v~~~~g~~~~~l~~n~~~~~~~~a~~~~~~~~l~~~~~~~v~~~i~~~~~~~  428 (557)
                      ++++|..++|++|||||+||+++|.+++|||||.++|||.+|++||++|+||++|++||++||.+|+++.
T Consensus         4 ~~~~k~~~~GkeYDyVFdVdi~dG~~~lkLpyN~~dnP~~aAqkFi~~n~Lp~~yldqI~~FI~~N~~~~   73 (80)
T 2k89_A            4 QTSGKVLYEGKEFDYVFSIDVNEGGPSYKLPYNTSDDPWLTAYNFLQKNDLNPMFLDQVAKFIIDNTKGQ   73 (80)
T ss_dssp             CSSSCEEETTEEESEEEEECCSSSCSCEEEEECTTSCHHHHHHHHHHHHTCCTTHHHHHHHHHHHHHSTT
T ss_pred             cCCCceeecCccccEEEEEEcCCCCcccccCccCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCc
Confidence            4578889999999999999999999999999999999999999999999999999999999999998754

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=99.86  E-value=1.6e-19  Score=196.01  Aligned_cols=270  Identities=14%  Similarity=0.123  Sum_probs=205.5

Q ss_pred             EEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcC--CC---------------CCCCC----CCCEEEEEE-CCC
Q psy7057           3 KLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKP--ND---------------LSPGA----KVNTLLSAS-WDM   59 (557)
Q Consensus         3 kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~--~~---------------~~~~~----~~~~l~sgs-~Dg   59 (557)
                      ++..++..+.. +.+++|+|||+ |++++.|++|++||+  .+               +.+++    +++++++++ .++
T Consensus       170 ~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~~~  248 (543)
T 1nir_A          170 KIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPP  248 (543)
T ss_dssp             CEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEESS
T ss_pred             eEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCCCcceEEeCCCcCCCCCEEEEEEccCC
Confidence            56677773333 89999999998 889999999999999  54               67788    899999988 589


Q ss_pred             eEEEEECCCCeEEEEEcc----------c-CCcEEEEEEcCCC--EEEEEECCCeEEEEeCC-CcEE--EEEeCCCCCEE
Q psy7057          60 TAKLWCLESQQCKLTIRQ----------H-EMAVWGVIQLANG--IIVTGCADKTIKLHSEE-GEFL--KTLTGHTDCVR  123 (557)
Q Consensus        60 ~i~iwd~~~~~~~~~l~~----------h-~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~~-~~~~--~~l~~h~~~V~  123 (557)
                      +|.+||..+++++.++..          | ...+.++.+++++  .+++...++.|.+||.. .+.+  ..+ .+...+.
T Consensus       249 ~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i-~~~~~~~  327 (543)
T 1nir_A          249 QFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSI-GAAPFLH  327 (543)
T ss_dssp             EEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEE-ECCSSCC
T ss_pred             eEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEe-ccCcCcc
Confidence            999999999999888864          2 2378999999976  77888889999999943 2322  233 4667788


Q ss_pred             EEEEeCCCe-EE-EEECCCeEEEEECCCCeEEEEEeC----CCCcEEEEEE-c-CCEEEEEe-CCCeEEEEECCC-----
Q psy7057         124 GLAVLNDTD-FV-SCSNDASIRVWDSTTGKCVHTMYG----HPNFIYSVAA-H-GDLITSGG-EDQCVCVYQNKA-----  189 (557)
Q Consensus       124 ~l~~~~~~~-lv-s~s~Dg~I~vwd~~~~~~~~~~~~----h~~~V~~l~~-~-~~~l~s~s-~Dg~I~iwd~~~-----  189 (557)
                      ++.|+|+++ |+ ++..+++|.+||+.+++++.++..    |......+.. + +..++++. .|++|.+||..+     
T Consensus       328 ~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~  407 (543)
T 1nir_A          328 DGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQ  407 (543)
T ss_dssp             CEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTT
T ss_pred             CceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCCceEEEEEeCCCCCch
Confidence            999999988 44 445689999999999999988874    6554444433 3 44566665 689999999765     


Q ss_pred             --C---ceEeeCCccEEEEEEcCCCc-EEEEE-------cCCcEEEEecCCCCcc-hhHHH------hcccceeEEEecc
Q psy7057         190 --Q---NSFMIPAMSVWAVAILPNSD-IVTGS-------SDGIVRVFSANPDRQA-EDAVQ------AQYAEEVKKLKSA  249 (557)
Q Consensus       190 --~---~~~~~~~~~v~~v~~~p~g~-l~sg~-------~Dg~I~iwd~~~~~~~-~~~~~------~~~~~~v~~l~~~  249 (557)
                        .   +++..+...+..++++|+++ |++++       .+++|.|||+.+.+.. .....      ..+...+..+.+.
T Consensus       408 ~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~  487 (543)
T 1nir_A          408 YAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYN  487 (543)
T ss_dssp             TBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEEC
T ss_pred             hcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCC
Confidence              3   66777877889999999999 66665       2789999999987654 21111      2234567777888


Q ss_pred             CCCceeEEEE----eCCCcEEEEecCCCh
Q psy7057         250 NEQEIGGVKV----SDDGIVRVFSANPDR  274 (557)
Q Consensus       250 ~~~~~~~vs~----s~DG~IrvW~~~~~~  274 (557)
                      +......++.    +.|+.|.|||..+.+
T Consensus       488 ~~g~~~~~s~~~~~~~~~~i~v~D~~t~~  516 (543)
T 1nir_A          488 KRGDEVWFSVWNGKNDSSALVVVDDKTLK  516 (543)
T ss_dssp             SSSSEEEEEEECCTTSCCEEEEEETTTTE
T ss_pred             CCCCEEEEEeecCCCCCCeEEEEECCCce
Confidence            8777666664    258999999987754

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=99.85  E-value=2.6e-19  Score=187.96  Aligned_cols=254  Identities=9%  Similarity=0.039  Sum_probs=188.8

Q ss_pred             cccEEEEEEcCCCc--EEEEE----CCC----cEEEEcC--CC------------------CCC--------------CC
Q psy7057          12 SMDVRSLSVTPDGC--ILSAS----RDK----SAKLWKP--ND------------------LSP--------------GA   47 (557)
Q Consensus        12 ~~~V~~l~~spdg~--l~sgs----~Dg----~V~iWd~--~~------------------~~~--------------~~   47 (557)
                      ...|...+|.+.|.  +++|+    .+|    +|++||+  .+                  +++              ..
T Consensus        62 ~~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~  141 (415)
T 2hqs_A           62 AQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGA  141 (415)
T ss_dssp             GGGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCC
T ss_pred             ccCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCc
Confidence            34677778888886  55776    568    9999999  54                  000              11


Q ss_pred             CCCEEEEEECC------CeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCC---eEEEEeCCCcEEEEEeC
Q psy7057          48 KVNTLLSASWD------MTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADK---TIKLHSEEGEFLKTLTG  117 (557)
Q Consensus        48 ~~~~l~sgs~D------g~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg---~I~vwd~~~~~~~~l~~  117 (557)
                      .+..++.++.+      ++|++||+.. .....+.+|...+.+++|+|++ .|++++.++   .|++||........+..
T Consensus       142 ~~~~l~~~s~~~~~~~~~~i~i~d~~g-~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~  220 (415)
T 2hqs_A          142 FRTRIAYVVQTNGGQFPYELRVSDYDG-YNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVAS  220 (415)
T ss_dssp             TTCEEEEEEECSSSSCCEEEEEEETTS-CSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEEC
T ss_pred             CCCEEEEEEecCCCCccceEEEEcCCC-CCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeec
Confidence            25677776654      7999999975 4567788899999999999999 899999885   99999965444456778


Q ss_pred             CCCCEEEEEEeCCCe-EE-EEECCCe--EEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeC-CC--eEEEEECC
Q psy7057         118 HTDCVRGLAVLNDTD-FV-SCSNDAS--IRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGE-DQ--CVCVYQNK  188 (557)
Q Consensus       118 h~~~V~~l~~~~~~~-lv-s~s~Dg~--I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~-Dg--~I~iwd~~  188 (557)
                      |...+.+++|+|+++ |+ +++.|+.  |++||+.++++ ..+..|...+.+++|  +++.|++++. ++  .|++||+.
T Consensus       221 ~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~  299 (415)
T 2hqs_A          221 FPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNIN  299 (415)
T ss_dssp             CSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETT
T ss_pred             CCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECC
Confidence            889999999999987 55 6666654  99999988876 567788899999999  7788887776 45  67778876


Q ss_pred             CC--ceEeeCCccEEEEEEcCCCc-EEEEEcC---CcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCC
Q psy7057         189 AQ--NSFMIPAMSVWAVAILPNSD-IVTGSSD---GIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDD  262 (557)
Q Consensus       189 ~~--~~~~~~~~~v~~v~~~p~g~-l~sg~~D---g~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~D  262 (557)
                      ..  ..+..+...+.+++|+|+|+ |++++.+   ..|++|++.++.....   ..+ ..+..+.+.++... +++++.|
T Consensus       300 ~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l---~~~-~~~~~~~~spdg~~-l~~~s~~  374 (415)
T 2hqs_A          300 GGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVL---SST-FLDETPSLAPNGTM-VIYSSSQ  374 (415)
T ss_dssp             SSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEEC---CCS-SSCEEEEECTTSSE-EEEEEEE
T ss_pred             CCCEEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEe---cCC-CCcCCeEEcCCCCE-EEEEEcC
Confidence            55  44455667889999999999 6666654   5899999987765322   112 25667777776664 5555555


Q ss_pred             C---cEEEEecCC
Q psy7057         263 G---IVRVFSANP  272 (557)
Q Consensus       263 G---~IrvW~~~~  272 (557)
                      +   .|++|+++.
T Consensus       375 ~~~~~l~~~d~~g  387 (415)
T 2hqs_A          375 GMGSVLNLVSTDG  387 (415)
T ss_dssp             TTEEEEEEEETTS
T ss_pred             CCccEEEEEECCC
Confidence            4   788888653

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=99.83  E-value=3.6e-19  Score=186.89  Aligned_cols=241  Identities=9%  Similarity=0.018  Sum_probs=185.2

Q ss_pred             EEeccCcccEEEEEEcC---------------CCcEEEEECC------CcEEEEcCCC---------------CCCCCCC
Q psy7057           6 TALYGHSMDVRSLSVTP---------------DGCILSASRD------KSAKLWKPND---------------LSPGAKV   49 (557)
Q Consensus         6 ~~l~gH~~~V~~l~~sp---------------dg~l~sgs~D------g~V~iWd~~~---------------~~~~~~~   49 (557)
                      ..+.+|...++.+++++               ..+++.++.+      ++|++||+..               ++++|++
T Consensus       111 ~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg  190 (415)
T 2hqs_A          111 NSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDG  190 (415)
T ss_dssp             EEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTSCSCEEEEEESSCEEEEEECTTS
T ss_pred             eEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCCCCCEEEeCCCCcceeeEEcCCC
Confidence            55788888888887775               4457766554      7999999875               6788999


Q ss_pred             CEEEEEECCC---eEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEE-EEECCCe--EEEEeCCCcEEEEEeCCCCCE
Q psy7057          50 NTLLSASWDM---TAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIV-TGCADKT--IKLHSEEGEFLKTLTGHTDCV  122 (557)
Q Consensus        50 ~~l~sgs~Dg---~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~-sgs~dg~--I~vwd~~~~~~~~l~~h~~~V  122 (557)
                      +.|++++.++   .|++||+.++++. .+..|...+.+++|+|++ .|+ +++.++.  |++||........+..|...+
T Consensus       191 ~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~  269 (415)
T 2hqs_A          191 SKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNN  269 (415)
T ss_dssp             SEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSSCE
T ss_pred             CEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCCcc
Confidence            9999999885   9999999998775 566788899999999999 565 6666655  899997655567888899999


Q ss_pred             EEEEEeCCCe-EEEEEC-CC--eEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCC---CeEEEEECCCC--c
Q psy7057         123 RGLAVLNDTD-FVSCSN-DA--SIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGED---QCVCVYQNKAQ--N  191 (557)
Q Consensus       123 ~~l~~~~~~~-lvs~s~-Dg--~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~D---g~I~iwd~~~~--~  191 (557)
                      .+++|+|+++ |++++. ++  .|.+||+.+++. ..+..|...+.+++|  ++++|++++.+   ..|++||+.+.  .
T Consensus       270 ~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~  348 (415)
T 2hqs_A          270 TEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ  348 (415)
T ss_dssp             EEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC-EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE
T ss_pred             cceEECCCCCEEEEEECCCCCcEEEEEECCCCCE-EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE
Confidence            9999999987 666665 44  688889887764 445567788888998  77888877754   58999998765  3


Q ss_pred             eEeeCCccEEEEEEcCCCc-EEEEEcCC---cEEEEecCCCCcchhHHHhcccceeEEEeccCCC
Q psy7057         192 SFMIPAMSVWAVAILPNSD-IVTGSSDG---IVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQ  252 (557)
Q Consensus       192 ~~~~~~~~v~~v~~~p~g~-l~sg~~Dg---~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~  252 (557)
                      .+..+. .+.+++|+|+|+ |++++.++   .|++|++......   .+..+.+.+..+.+.+..
T Consensus       349 ~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~---~l~~~~~~v~~~~~~~~~  409 (415)
T 2hqs_A          349 VLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKA---RLPATDGQVKFPAWSPYL  409 (415)
T ss_dssp             ECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEE---ECCCSSSEEEEEEECCCC
T ss_pred             EecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEE---EeeCCCCCCcCCcccccc
Confidence            344443 799999999999 77777766   7999998755432   233455677777776543

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=99.78  E-value=1.1e-17  Score=188.10  Aligned_cols=257  Identities=9%  Similarity=0.030  Sum_probs=186.3

Q ss_pred             cccEEEEEEcCCCc-EEEEEC-CC-----cEEEEcCCC----------------------------------------CC
Q psy7057          12 SMDVRSLSVTPDGC-ILSASR-DK-----SAKLWKPND----------------------------------------LS   44 (557)
Q Consensus        12 ~~~V~~l~~spdg~-l~sgs~-Dg-----~V~iWd~~~----------------------------------------~~   44 (557)
                      ...|.+++|+|||+ |++++. |+     +|++||+.+                                        ++
T Consensus        36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  115 (741)
T 2ecf_A           36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ  115 (741)
T ss_dssp             CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred             CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence            45799999999998 888888 88     899998754                                        23


Q ss_pred             CCCCCCEEEEEECCCeEEEEECCCCe--EEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcEEEEE-eCCCC
Q psy7057          45 PGAKVNTLLSASWDMTAKLWCLESQQ--CKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFLKTL-TGHTD  120 (557)
Q Consensus        45 ~~~~~~~l~sgs~Dg~i~iwd~~~~~--~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~~~l-~~h~~  120 (557)
                      ++|++++|++++. ++|++||+.++.  ....+..|...+.+++|+|+| .|++++ ++.|++||..+.....+ ..+..
T Consensus       116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~~  193 (741)
T 2ecf_A          116 WSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADGST  193 (741)
T ss_dssp             ECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCCCS
T ss_pred             ECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCCcc
Confidence            6788999999987 999999998872  345577788899999999999 677766 56999999655444443 33333


Q ss_pred             C----------------EEEEEEeCCCe-EEEEECCC---------------------------------eEEEEECCC-
Q psy7057         121 C----------------VRGLAVLNDTD-FVSCSNDA---------------------------------SIRVWDSTT-  149 (557)
Q Consensus       121 ~----------------V~~l~~~~~~~-lvs~s~Dg---------------------------------~I~vwd~~~-  149 (557)
                      .                +.+++|+|+++ |++++.|+                                 .|.+||+.+ 
T Consensus       194 ~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~  273 (741)
T 2ecf_A          194 TIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQ  273 (741)
T ss_dssp             SEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTT
T ss_pred             ceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCC
Confidence            2                47899999987 67776665                                 789999988 


Q ss_pred             CeEEEEEe--CCCCcEEEEEE-cCCEEEEEeC-----CCeEEEEECCCC---ceEeeCCc----cEEEEEEcCCCc-EEE
Q psy7057         150 GKCVHTMY--GHPNFIYSVAA-HGDLITSGGE-----DQCVCVYQNKAQ---NSFMIPAM----SVWAVAILPNSD-IVT  213 (557)
Q Consensus       150 ~~~~~~~~--~h~~~V~~l~~-~~~~l~s~s~-----Dg~I~iwd~~~~---~~~~~~~~----~v~~v~~~p~g~-l~s  213 (557)
                      ++......  .|...+.+++| +|+.|++++.     +..|++||..+.   ..+..+..    .+.+++|+|+|+ +++
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~~pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~  353 (741)
T 2ecf_A          274 AQTQWIDLGKEQDIYLARVNWRDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWS  353 (741)
T ss_dssp             CCCEEECCCSCSSEEEEEEEEEETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEE
T ss_pred             CceEEecCCCCcceEEEEEEeCCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEEE
Confidence            87654433  37778888887 7777776653     568999997765   22223322    346889999999 667


Q ss_pred             EEcCCcEEEEecCCCCcchhHHHhcccceeEEE-eccCCCceeEEEEeCCC--cEEEEecCC
Q psy7057         214 GSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKL-KSANEQEIGGVKVSDDG--IVRVFSANP  272 (557)
Q Consensus       214 g~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l-~~~~~~~~~~vs~s~DG--~IrvW~~~~  272 (557)
                      ++.||.++||.++.....  ..+..+...+..+ .+.++....+++++.|+  .++||+++.
T Consensus       354 ~~~~g~~~l~~~~~~~~~--~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~  413 (741)
T 2ecf_A          354 SERTGFQHLYRIDSKGKA--AALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPL  413 (741)
T ss_dssp             ECTTSSCEEEEECSSSCE--EESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEET
T ss_pred             ecCCCccEEEEEcCCCCe--eeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEc
Confidence            888998888877632211  1222334455555 36666665556777777  899998764

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.77  E-value=4.4e-17  Score=164.17  Aligned_cols=244  Identities=9%  Similarity=0.110  Sum_probs=165.8

Q ss_pred             EEEEECCCcEEEEcCCC------------------CCCCCCCCEEEEEECC-CeEEEEECC--CCe--EEEEEcccCCcE
Q psy7057          26 ILSASRDKSAKLWKPND------------------LSPGAKVNTLLSASWD-MTAKLWCLE--SQQ--CKLTIRQHEMAV   82 (557)
Q Consensus        26 l~sgs~Dg~V~iWd~~~------------------~~~~~~~~~l~sgs~D-g~i~iwd~~--~~~--~~~~l~~h~~~V   82 (557)
                      +++++.|+.|++|++..                  +.+++++++|++++.+ +.|++|++.  +++  .+..+..+. .+
T Consensus         8 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~   86 (343)
T 1ri6_A            8 YIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SL   86 (343)
T ss_dssp             EEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CC
T ss_pred             EEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CC
Confidence            33447799999998751                  5678889999998887 999999987  554  344555444 78


Q ss_pred             EEEEEcCCC-EEEEEE-CCCeEEEEeC-CC---cEEEEEeCCCCCEEEEEEeCCCe-EEEEE-CCCeEEEEECCC-CeEE
Q psy7057          83 WGVIQLANG-IIVTGC-ADKTIKLHSE-EG---EFLKTLTGHTDCVRGLAVLNDTD-FVSCS-NDASIRVWDSTT-GKCV  153 (557)
Q Consensus        83 ~~l~~~~~~-~l~sgs-~dg~I~vwd~-~~---~~~~~l~~h~~~V~~l~~~~~~~-lvs~s-~Dg~I~vwd~~~-~~~~  153 (557)
                      .+++|+|++ .+++++ .++.|.+||. .+   ..+..+. ....+.+++|+|++. +++++ .++.|++||+.+ ++..
T Consensus        87 ~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~  165 (343)
T 1ri6_A           87 THISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVE-GLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLV  165 (343)
T ss_dssp             SEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEEC-CCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEE
T ss_pred             cEEEEcCCCCEEEEEecCCCeEEEEECCCCcccccccccc-CCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCcee
Confidence            899999998 565555 4889999996 22   2333444 344689999999986 55555 899999999987 6543


Q ss_pred             E----EEeC-CCCcEEEEEE--cCCEEEEE-eCCCeEEEEECCC--C-----ceEeeC------CccEEEEEEcCCCc-E
Q psy7057         154 H----TMYG-HPNFIYSVAA--HGDLITSG-GEDQCVCVYQNKA--Q-----NSFMIP------AMSVWAVAILPNSD-I  211 (557)
Q Consensus       154 ~----~~~~-h~~~V~~l~~--~~~~l~s~-s~Dg~I~iwd~~~--~-----~~~~~~------~~~v~~v~~~p~g~-l  211 (557)
                      .    .+.. ....+.++++  ++++++++ ..++.|++|++..  .     ..+...      ...+.+++|+|+++ +
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l  245 (343)
T 1ri6_A          166 AQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHL  245 (343)
T ss_dssp             EEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEE
T ss_pred             eecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEE
Confidence            2    2333 3457888888  66666544 5889999999743  2     112111      12567899999998 5


Q ss_pred             E-EEEcCCcEEEEecCC--CCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCC
Q psy7057         212 V-TGSSDGIVRVFSANP--DRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANP  272 (557)
Q Consensus       212 ~-sg~~Dg~I~iwd~~~--~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~  272 (557)
                      + ++..++.|++|++..  +........... ..+..+.+.+.....++++..|+.|++|+++.
T Consensus       246 ~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~  308 (343)
T 1ri6_A          246 YACDRTASLITVFSVSEDGSVLSKEGFQPTE-TQPRGFNVDHSGKYLIAAGQKSHHISVYEIVG  308 (343)
T ss_dssp             EEEETTTTEEEEEEECTTSCCEEEEEEEECS-SSCCCEEECTTSSEEEEECTTTCEEEEEEEET
T ss_pred             EEEecCCCEEEEEEEcCCCCceEEeeeecCC-CccceEEECCCCCEEEEecCCCCeEEEEEEcC
Confidence            5 455799999999983  222111111111 22556667766665445555789999997664

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.77  E-value=5.4e-17  Score=163.49  Aligned_cols=255  Identities=8%  Similarity=0.036  Sum_probs=175.5

Q ss_pred             EEEcCCCc--EEEEECCCcEEEEcCCC---------------CCCCCCCCEEEEEEC-CCeEEEEECCCCeE-EEEEccc
Q psy7057          18 LSVTPDGC--ILSASRDKSAKLWKPND---------------LSPGAKVNTLLSASW-DMTAKLWCLESQQC-KLTIRQH   78 (557)
Q Consensus        18 l~~spdg~--l~sgs~Dg~V~iWd~~~---------------~~~~~~~~~l~sgs~-Dg~i~iwd~~~~~~-~~~l~~h   78 (557)
                      ..|.+++.  +++++.+++|++||+.+               +.++++++++++++. ++.|.+||+.+++. ...+..+
T Consensus         3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~   82 (331)
T 3u4y_A            3 AMFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFVDTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEG   82 (331)
T ss_dssp             ----CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEEEEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEEC
T ss_pred             eeEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcceEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccC
Confidence            34556554  66888999999999876               566788887777666 89999999999887 7777777


Q ss_pred             CCcEEEEEEcCCC-EEEEEECCC---eEEEEeC-CCcEEEEEeCCCCCEEEEEEeCCCe-EE-EEECCCe-EEEEECCCC
Q psy7057          79 EMAVWGVIQLANG-IIVTGCADK---TIKLHSE-EGEFLKTLTGHTDCVRGLAVLNDTD-FV-SCSNDAS-IRVWDSTTG  150 (557)
Q Consensus        79 ~~~V~~l~~~~~~-~l~sgs~dg---~I~vwd~-~~~~~~~l~~h~~~V~~l~~~~~~~-lv-s~s~Dg~-I~vwd~~~~  150 (557)
                      ..+..+++|+|++ .++++..++   .|.+||. +++.+..+.. ...+.+++|+|+++ ++ +...++. |.+|++...
T Consensus        83 ~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~  161 (331)
T 3u4y_A           83 QSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI-PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDAD  161 (331)
T ss_dssp             SSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC-CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTT
T ss_pred             CCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC-CCCccceEECCCCCEEEEEecCCCceEEEEEECCC
Confidence            7766669999998 666554443   8999995 4566666554 45579999999986 44 5566688 999998753


Q ss_pred             eEE----EEEeCCCCcEEEEEE--cCCEE-EEEeCCCeEEEEECCCCce---E--eeCCccEEEEEEcCCCc-EEEE-Ec
Q psy7057         151 KCV----HTMYGHPNFIYSVAA--HGDLI-TSGGEDQCVCVYQNKAQNS---F--MIPAMSVWAVAILPNSD-IVTG-SS  216 (557)
Q Consensus       151 ~~~----~~~~~h~~~V~~l~~--~~~~l-~s~s~Dg~I~iwd~~~~~~---~--~~~~~~v~~v~~~p~g~-l~sg-~~  216 (557)
                      ..+    .....+.....++++  +++++ +++..++.|++||+.+...   +  ......+..++|+|+|+ ++++ ..
T Consensus       162 g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~  241 (331)
T 3u4y_A          162 GVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLTES  241 (331)
T ss_dssp             CCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEECSS
T ss_pred             CcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCCCCceEEECCCCCEEEEEEcC
Confidence            322    122234556788888  67655 4555789999999765532   2  12335678899999999 5444 45


Q ss_pred             CCcEEEEecCCCCcchhHHH-------hcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCC
Q psy7057         217 DGIVRVFSANPDRQAEDAVQ-------AQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPD  273 (557)
Q Consensus       217 Dg~I~iwd~~~~~~~~~~~~-------~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~  273 (557)
                      ++.|.+||..+++.......       .........+.+.++.....+++..++.|+||++...
T Consensus       242 ~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~  305 (331)
T 3u4y_A          242 TVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGK  305 (331)
T ss_dssp             EEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSC
T ss_pred             CCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCC
Confidence            78899999987665111000       0111111335666777666677778889999998753

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.77  E-value=3.8e-16  Score=158.28  Aligned_cols=218  Identities=11%  Similarity=0.091  Sum_probs=166.7

Q ss_pred             cccEEEEEEcCCCc-EEEEEC-------CCcEEEEcCCC---------------CCCCCCCCEEEEE-ECCCeEEEEECC
Q psy7057          12 SMDVRSLSVTPDGC-ILSASR-------DKSAKLWKPND---------------LSPGAKVNTLLSA-SWDMTAKLWCLE   67 (557)
Q Consensus        12 ~~~V~~l~~spdg~-l~sgs~-------Dg~V~iWd~~~---------------~~~~~~~~~l~sg-s~Dg~i~iwd~~   67 (557)
                      ...+..++|+|+++ +++++.       ++.|.+||..+               +.++++++.++.+ ..++.|.+||+.
T Consensus        40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~  119 (353)
T 3vgz_A           40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAK  119 (353)
T ss_dssp             ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred             ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEecCCCEEEEEeCC
Confidence            45688999999997 666653       67899999876               5567788865554 557999999999


Q ss_pred             CCeEEEEEcccCCc---------EEEEEEcCCC-EEEEEE--CCCeEEEEeC-CCcEEEEEeCCCCCEEEEEEeCCCe-E
Q psy7057          68 SQQCKLTIRQHEMA---------VWGVIQLANG-IIVTGC--ADKTIKLHSE-EGEFLKTLTGHTDCVRGLAVLNDTD-F  133 (557)
Q Consensus        68 ~~~~~~~l~~h~~~---------V~~l~~~~~~-~l~sgs--~dg~I~vwd~-~~~~~~~l~~h~~~V~~l~~~~~~~-l  133 (557)
                      +++.+..+..+...         +.+++++|++ .+++++  .++.|.+||. +++.+..+..+...+.+++++|++. +
T Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l  199 (353)
T 3vgz_A          120 TGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRL  199 (353)
T ss_dssp             TCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEE
T ss_pred             CCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEE
Confidence            99988888765422         7899999988 555554  4788999994 5666677765666789999999976 6


Q ss_pred             EEEECCCeEEEEECCCCeEEEEEeC----CCCcEEEEEE--cCCEEEEEe-CCCeEEEEECCCCc---eEeeCCccEEEE
Q psy7057         134 VSCSNDASIRVWDSTTGKCVHTMYG----HPNFIYSVAA--HGDLITSGG-EDQCVCVYQNKAQN---SFMIPAMSVWAV  203 (557)
Q Consensus       134 vs~s~Dg~I~vwd~~~~~~~~~~~~----h~~~V~~l~~--~~~~l~s~s-~Dg~I~iwd~~~~~---~~~~~~~~v~~v  203 (557)
                      ++++.++.|.+||+.+++.+..+..    +...+.++++  +++.+++++ .++.|.+||..+..   .+....  ...+
T Consensus       200 ~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~--~~~~  277 (353)
T 3vgz_A          200 YTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE--SLAV  277 (353)
T ss_dssp             EEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS--CCCE
T ss_pred             EEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC--CceE
Confidence            6888899999999999998888764    5556778888  677666555 55999999987652   333222  3579


Q ss_pred             EEcCCCc-EEEEE-cCCcEEEEecCCCCcc
Q psy7057         204 AILPNSD-IVTGS-SDGIVRVFSANPDRQA  231 (557)
Q Consensus       204 ~~~p~g~-l~sg~-~Dg~I~iwd~~~~~~~  231 (557)
                      +|+|+++ +++++ .++.|.+||..+.+..
T Consensus       278 ~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~  307 (353)
T 3vgz_A          278 LFNPARNEAYVTHRQAGKVSVIDAKSYKVV  307 (353)
T ss_dssp             EEETTTTEEEEEETTTTEEEEEETTTTEEE
T ss_pred             EECCCCCEEEEEECCCCeEEEEECCCCeEE
Confidence            9999998 55544 6999999999876543

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.74  E-value=9.1e-17  Score=157.64  Aligned_cols=210  Identities=11%  Similarity=0.039  Sum_probs=159.3

Q ss_pred             EEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC------------------CCCCCCCCEEEEEEC--CCeEEEE
Q psy7057           6 TALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND------------------LSPGAKVNTLLSASW--DMTAKLW   64 (557)
Q Consensus         6 ~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~------------------~~~~~~~~~l~sgs~--Dg~i~iw   64 (557)
                      ..+..|...|.+++|+|+|+ |++++ ++.|++||+.+                  +.+++++..|++++.  ++..+||
T Consensus        35 ~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~  113 (297)
T 2ojh_A           35 RVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIY  113 (297)
T ss_dssp             EEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEE
T ss_pred             eeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEE
Confidence            35667899999999999999 55554 88999999754                  556788999999993  3445555


Q ss_pred             --ECCCCeEEEEEcccCCcEEEEEEcCCC-EEE-EEECCCeEEEEe--CCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEE
Q psy7057          65 --CLESQQCKLTIRQHEMAVWGVIQLANG-IIV-TGCADKTIKLHS--EEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCS  137 (557)
Q Consensus        65 --d~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~-sgs~dg~I~vwd--~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s  137 (557)
                        ++.+++ ...+..+ ..+.+++|+|++ .|+ +++.++.+++|+  ..+.....+..|...+.+++|+|++. ++.++
T Consensus       114 ~~~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~  191 (297)
T 2ojh_A          114 LLPSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNS  191 (297)
T ss_dssp             EEETTCCC-CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEE
T ss_pred             EEECCCCc-eEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEe
Confidence              555544 3444433 348899999998 454 788999999998  45556677778888999999999987 55444


Q ss_pred             -CCCeEEEEECC-CCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCC-----------CeEEEEECCCC--c---eEeeCC
Q psy7057         138 -NDASIRVWDST-TGKCVHTMYGHPNFIYSVAA--HGDLITSGGED-----------QCVCVYQNKAQ--N---SFMIPA  197 (557)
Q Consensus       138 -~Dg~I~vwd~~-~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~D-----------g~I~iwd~~~~--~---~~~~~~  197 (557)
                       .++.+++|++. .+..+..+..|...+.+++|  ++++|++++.+           +.|++||+...  .   .+..+.
T Consensus       192 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~  271 (297)
T 2ojh_A          192 SRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQ  271 (297)
T ss_dssp             CTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEEST
T ss_pred             cCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCC
Confidence             68999999886 55667778888888999998  67788877765           56999997654  2   223567


Q ss_pred             ccEEEEEEcCCCc-EEEEEcCC
Q psy7057         198 MSVWAVAILPNSD-IVTGSSDG  218 (557)
Q Consensus       198 ~~v~~v~~~p~g~-l~sg~~Dg  218 (557)
                      ..+.+++|+|+++ |++++.+.
T Consensus       272 ~~~~~~~~spdg~~l~~~~~~~  293 (297)
T 2ojh_A          272 GTMNSPNWSPDGDEFAYVRYFP  293 (297)
T ss_dssp             TTSCSCCBCTTSSEEEEEEECC
T ss_pred             cccccceECCCCCEEEEEEecc
Confidence            7899999999998 66666543

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.74  E-value=5.2e-17  Score=159.37  Aligned_cols=230  Identities=10%  Similarity=-0.033  Sum_probs=164.5

Q ss_pred             EEECCCcEEEEcCCC---------------CCCCCCCCEEEEEECCCeEEEEECCC-CeEEEEEccc-CCcEEEEEEcCC
Q psy7057          28 SASRDKSAKLWKPND---------------LSPGAKVNTLLSASWDMTAKLWCLES-QQCKLTIRQH-EMAVWGVIQLAN   90 (557)
Q Consensus        28 sgs~Dg~V~iWd~~~---------------~~~~~~~~~l~sgs~Dg~i~iwd~~~-~~~~~~l~~h-~~~V~~l~~~~~   90 (557)
                      +++.|++|++||+.+               +.++|++.+|++++ ++.|++||+.+ ++....+..| ...+.+++|+|+
T Consensus        17 ~~~~~~~i~~~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spd   95 (297)
T 2ojh_A           17 GGSMRSSIEIFNIRTRKMRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPD   95 (297)
T ss_dssp             -CCCCEEEEEEETTTTEEEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTT
T ss_pred             CCCcceeEEEEeCCCCceeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCC
Confidence            456789999999876               67888999999987 78999999999 8777666665 478899999999


Q ss_pred             C-EEEEEE--CCCeEEEEe--CCCcEEEEEeCCCCCEEEEEEeCCCe-EE-EEECCCeEEEEECCC-CeEEEEEeCCCCc
Q psy7057          91 G-IIVTGC--ADKTIKLHS--EEGEFLKTLTGHTDCVRGLAVLNDTD-FV-SCSNDASIRVWDSTT-GKCVHTMYGHPNF  162 (557)
Q Consensus        91 ~-~l~sgs--~dg~I~vwd--~~~~~~~~l~~h~~~V~~l~~~~~~~-lv-s~s~Dg~I~vwd~~~-~~~~~~~~~h~~~  162 (557)
                      + .|++++  .++...||.  ..+.....+..+. .+.+++|+|++. ++ +++.++.+++|++.. ......+..|...
T Consensus        96 g~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  174 (297)
T 2ojh_A           96 GALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNL-PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGR  174 (297)
T ss_dssp             SSEEEEEECTTTSSCEEEEEETTCCCCEECCSSS-SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSC
T ss_pred             CCEEEEEEeCCCCcceEEEEECCCCceEEeecCC-CccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCc
Confidence            9 788888  334555554  4555555555444 489999999987 55 788899999998532 2334566678889


Q ss_pred             EEEEEE--cCCEEEEEe-CCCeEEEEECC--CC--ceEeeCCccEEEEEEcCCCc-EEEEEcC-----------CcEEEE
Q psy7057         163 IYSVAA--HGDLITSGG-EDQCVCVYQNK--AQ--NSFMIPAMSVWAVAILPNSD-IVTGSSD-----------GIVRVF  223 (557)
Q Consensus       163 V~~l~~--~~~~l~s~s-~Dg~I~iwd~~--~~--~~~~~~~~~v~~v~~~p~g~-l~sg~~D-----------g~I~iw  223 (557)
                      +.+++|  +++.|+.++ .++.+++|+..  ..  ..+..+...+.+++|+|+++ |++++.+           +.|++|
T Consensus       175 ~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~  254 (297)
T 2ojh_A          175 NDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLM  254 (297)
T ss_dssp             EEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEE
T ss_pred             cccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEE
Confidence            999999  677777655 58999999853  22  45556667899999999998 6666665           569999


Q ss_pred             ecCCCCcchhHHHhcccceeEEEeccCCCceeEEEE
Q psy7057         224 SANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKV  259 (557)
Q Consensus       224 d~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~  259 (557)
                      ++.++..........+...+..+.+.+.....++++
T Consensus       255 d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~  290 (297)
T 2ojh_A          255 DMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVR  290 (297)
T ss_dssp             ETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEE
T ss_pred             ecCCCCceeeeccCCCCcccccceECCCCCEEEEEE
Confidence            998765433222223344455555655555433333

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=99.74  E-value=3e-16  Score=175.35  Aligned_cols=256  Identities=8%  Similarity=0.002  Sum_probs=179.4

Q ss_pred             ccEEEEEEcCCCcEEEEECCCcEEEEcCCC---------------CCCCCCCCEEEEEECCCeEEEEECCC-----CeEE
Q psy7057          13 MDVRSLSVTPDGCILSASRDKSAKLWKPND---------------LSPGAKVNTLLSASWDMTAKLWCLES-----QQCK   72 (557)
Q Consensus        13 ~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~---------------~~~~~~~~~l~sgs~Dg~i~iwd~~~-----~~~~   72 (557)
                      ..|.+++|+||+.++.+ .+++|++||+.+               +.++|+++.|+++ .++.|++|++.+     ++..
T Consensus        82 ~~v~~~~~spd~~~~~~-~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~  159 (706)
T 2z3z_A           82 FPSFRTLDAGRGLVVLF-TQGGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAI  159 (706)
T ss_dssp             CCCEEEEETTTTEEEEE-ETTEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCE
T ss_pred             cCceeEEECCCCeEEEE-ECCEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcE
Confidence            56999999999445544 469999999875               6788999999985 689999999988     7766


Q ss_pred             EEEcccCCc--------------EEEEEEcCCC-EEEEEE---------------------------------CCCeEEE
Q psy7057          73 LTIRQHEMA--------------VWGVIQLANG-IIVTGC---------------------------------ADKTIKL  104 (557)
Q Consensus        73 ~~l~~h~~~--------------V~~l~~~~~~-~l~sgs---------------------------------~dg~I~v  104 (557)
                      .....+...              +.++.|+|+| .|++++                                 .+..|++
T Consensus       160 ~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~  239 (706)
T 2z3z_A          160 AVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGI  239 (706)
T ss_dssp             ESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEE
T ss_pred             EeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEE
Confidence            544444333              4789999999 788877                                 4567999


Q ss_pred             EeCCCcEEEEEe---CCCCCEEEEEEeCCCe-EEEEECCC-----eEEEEECCCCeEEEEEe--CCCC---cEEEEEE--
Q psy7057         105 HSEEGEFLKTLT---GHTDCVRGLAVLNDTD-FVSCSNDA-----SIRVWDSTTGKCVHTMY--GHPN---FIYSVAA--  168 (557)
Q Consensus       105 wd~~~~~~~~l~---~h~~~V~~l~~~~~~~-lvs~s~Dg-----~I~vwd~~~~~~~~~~~--~h~~---~V~~l~~--  168 (557)
                      ||..+.....+.   .|...+.+++|+|+++ +++++.++     .|++||+.+++....+.  .+..   .+.+++|  
T Consensus       240 ~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp  319 (706)
T 2z3z_A          240 YHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLP  319 (706)
T ss_dssp             EETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECT
T ss_pred             EECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeec
Confidence            996555444333   4677899999999987 66766665     89999999984443332  2222   2345566  


Q ss_pred             --cCCEEEEEeCCCeEEEEECC-CC---ceEeeCCccEEE-EEEcCCCc-EEEEE-cCC----cEEEEecCCCCcchhHH
Q psy7057         169 --HGDLITSGGEDQCVCVYQNK-AQ---NSFMIPAMSVWA-VAILPNSD-IVTGS-SDG----IVRVFSANPDRQAEDAV  235 (557)
Q Consensus       169 --~~~~l~s~s~Dg~I~iwd~~-~~---~~~~~~~~~v~~-v~~~p~g~-l~sg~-~Dg----~I~iwd~~~~~~~~~~~  235 (557)
                        +++++++++.|+.+++|... ..   ..+..+...+.+ ++|+|+++ |+.++ .++    .|..|+..++...... 
T Consensus       320 ~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~l~-  398 (706)
T 2z3z_A          320 GSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKTKDLT-  398 (706)
T ss_dssp             TCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCCCEESC-
T ss_pred             CCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCceecc-
Confidence              55688888899999998743 22   445555566776 79999998 55444 444    5666676665432211 


Q ss_pred             HhcccceeEEEeccCCCceeEEEEeCC---CcEEEEecCCCh
Q psy7057         236 QAQYAEEVKKLKSANEQEIGGVKVSDD---GIVRVFSANPDR  274 (557)
Q Consensus       236 ~~~~~~~v~~l~~~~~~~~~~vs~s~D---G~IrvW~~~~~~  274 (557)
                         +...+..+.+.++....+++++.+   +.|++|++..++
T Consensus       399 ---~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~  437 (706)
T 2z3z_A          399 ---PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS  437 (706)
T ss_dssp             ---CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred             ---CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence               334466777777776555555544   579999987764

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=99.73  E-value=3.3e-16  Score=170.03  Aligned_cols=226  Identities=12%  Similarity=-0.002  Sum_probs=169.5

Q ss_pred             CCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeC---CCcEEEEEeCCCC
Q psy7057          45 PGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSE---EGEFLKTLTGHTD  120 (557)
Q Consensus        45 ~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~---~~~~~~~l~~h~~  120 (557)
                      +++++..+++++.|++|.+||..+++++.++..+.. +.+++|+|++ .+++++.|++|++||.   +++++.++. +..
T Consensus       145 ~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~-~g~  222 (543)
T 1nir_A          145 LDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK-IGI  222 (543)
T ss_dssp             CCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE-CCS
T ss_pred             cCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe-cCC
Confidence            455677888899999999999999999999884433 8899999999 8999999999999997   567777777 456


Q ss_pred             CEEEEEEeC----CCe-EEEEE-CCCeEEEEECCCCeEEEEEeCC----------C-CcEEEEEEc--CC-EEEEEeCCC
Q psy7057         121 CVRGLAVLN----DTD-FVSCS-NDASIRVWDSTTGKCVHTMYGH----------P-NFIYSVAAH--GD-LITSGGEDQ  180 (557)
Q Consensus       121 ~V~~l~~~~----~~~-lvs~s-~Dg~I~vwd~~~~~~~~~~~~h----------~-~~V~~l~~~--~~-~l~s~s~Dg  180 (557)
                      .+++++|+|    +++ +++++ .+++|.+||..+++++.++..+          . ..+.++.++  +. ++++...++
T Consensus       223 ~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g  302 (543)
T 1nir_A          223 EARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETG  302 (543)
T ss_dssp             EEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTT
T ss_pred             CcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCC
Confidence            789999999    877 44555 5899999999999999988652          2 368888883  33 677888999


Q ss_pred             eEEEEECCCC---c-eEeeCCccEEEEEEcCCCc-EEEE-EcCCcEEEEecCCCCcchhHHHh--cccceeEEEeccCCC
Q psy7057         181 CVCVYQNKAQ---N-SFMIPAMSVWAVAILPNSD-IVTG-SSDGIVRVFSANPDRQAEDAVQA--QYAEEVKKLKSANEQ  252 (557)
Q Consensus       181 ~I~iwd~~~~---~-~~~~~~~~v~~v~~~p~g~-l~sg-~~Dg~I~iwd~~~~~~~~~~~~~--~~~~~v~~l~~~~~~  252 (557)
                      .|.+||....   . ....+...+.+++|+|+++ ++++ ..+++|++||..+++........  .|.+....+ ..+..
T Consensus       303 ~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~  381 (543)
T 1nir_A          303 KVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKY  381 (543)
T ss_dssp             EEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTT
T ss_pred             eEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCC
Confidence            9999997654   1 1223456788999999999 5544 45899999999988654332211  122222222 23443


Q ss_pred             ceeEEEEe-CCCcEEEEecCCC
Q psy7057         253 EIGGVKVS-DDGIVRVFSANPD  273 (557)
Q Consensus       253 ~~~~vs~s-~DG~IrvW~~~~~  273 (557)
                      ....++++ .|++|+||+++++
T Consensus       382 g~~~~s~~~~d~~V~v~d~~~~  403 (543)
T 1nir_A          382 GPVWSTSHLGDGSISLIGTDPK  403 (543)
T ss_dssp             EEEEEEEBSSSSEEEEEECCTT
T ss_pred             ccEEEeccCCCceEEEEEeCCC
Confidence            44567775 6899999999873

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.72  E-value=4.1e-17  Score=172.26  Aligned_cols=151  Identities=16%  Similarity=0.150  Sum_probs=121.2

Q ss_pred             cCCcEEEEEEcCCC-EEE----EEECCCeEEEEeCCC---------c---EEEEEeCCCCCEEEEEEeCC-Ce-EEEEEC
Q psy7057          78 HEMAVWGVIQLANG-IIV----TGCADKTIKLHSEEG---------E---FLKTLTGHTDCVRGLAVLND-TD-FVSCSN  138 (557)
Q Consensus        78 h~~~V~~l~~~~~~-~l~----sgs~dg~I~vwd~~~---------~---~~~~l~~h~~~V~~l~~~~~-~~-lvs~s~  138 (557)
                      +...|.+++|+|++ .|+    +|+.|++|++||...         +   .+..+.+|...|++++|+|+ +. |++++.
T Consensus        91 ~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~  170 (434)
T 2oit_A           91 MKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLA  170 (434)
T ss_dssp             CSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEET
T ss_pred             CCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEEC
Confidence            67789999999998 777    788899999999321         1   24556789999999999997 44 779999


Q ss_pred             CCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC--ceEeeC-------CccEEEEEEcC
Q psy7057         139 DASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ--NSFMIP-------AMSVWAVAILP  207 (557)
Q Consensus       139 Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~--~~~~~~-------~~~v~~v~~~p  207 (557)
                      |++|++||++++..+....+|...|++++|  ++++|++|+.|++|++||.+..  ..+..+       ...|.+++|++
T Consensus       171 Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~w~~  250 (434)
T 2oit_A          171 DGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPTLQEKKVIPCPPFYESDHPVRVLDVLWIG  250 (434)
T ss_dssp             TSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTTCCEEEEECCCTTCCTTSCEEEEEEEEEE
T ss_pred             CCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccCCcccccccCCcccCCCCceeEEEEEEec
Confidence            999999999999887777889999999999  6789999999999999998722  333332       23789999999


Q ss_pred             CCcEE--EEEcCCc------EEEEecCCC
Q psy7057         208 NSDIV--TGSSDGI------VRVFSANPD  228 (557)
Q Consensus       208 ~g~l~--sg~~Dg~------I~iwd~~~~  228 (557)
                      ++.++  .++.||.      +++|++...
T Consensus       251 ~~~~l~~~~~~dg~~~~~~~v~i~~l~~~  279 (434)
T 2oit_A          251 TYVFAIVYAAADGTLETSPDVVMALLPKK  279 (434)
T ss_dssp             TTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred             CceEEEEEccCCCccCCCCceEEEEeccC
Confidence            88844  3434433      899998754

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.72  E-value=8.9e-16  Score=154.56  Aligned_cols=215  Identities=11%  Similarity=0.133  Sum_probs=155.2

Q ss_pred             cCcccEEEEEEcCCCc-EEEEECC-CcEEEEcCC--C-----------------CCCCCCCCEEEEEEC-CCeEEEEECC
Q psy7057          10 GHSMDVRSLSVTPDGC-ILSASRD-KSAKLWKPN--D-----------------LSPGAKVNTLLSASW-DMTAKLWCLE   67 (557)
Q Consensus        10 gH~~~V~~l~~spdg~-l~sgs~D-g~V~iWd~~--~-----------------~~~~~~~~~l~sgs~-Dg~i~iwd~~   67 (557)
                      .|...+.+++|+|+|+ |++++.+ +.|++|++.  +                 +.+++++++|++++. ++.|.+|++.
T Consensus        35 ~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~  114 (343)
T 1ri6_A           35 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLE  114 (343)
T ss_dssp             ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred             ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecCCCeEEEEECC
Confidence            4778899999999998 7788776 999999987  2                 457788998877765 8899999994


Q ss_pred             ---CCeEEEEEcccCCcEEEEEEcCCC-EEEEEE-CCCeEEEEeCC--CcEEE----EEeC-CCCCEEEEEEeCCCe-EE
Q psy7057          68 ---SQQCKLTIRQHEMAVWGVIQLANG-IIVTGC-ADKTIKLHSEE--GEFLK----TLTG-HTDCVRGLAVLNDTD-FV  134 (557)
Q Consensus        68 ---~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs-~dg~I~vwd~~--~~~~~----~l~~-h~~~V~~l~~~~~~~-lv  134 (557)
                         +.+....+..+ ..+.+++|+|++ .+++++ .++.|++||..  +....    .+.. ....+.+++|+|++. ++
T Consensus       115 ~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~  193 (343)
T 1ri6_A          115 DGLPVGVVDVVEGL-DGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAY  193 (343)
T ss_dssp             TTEEEEEEEEECCC-TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEE
T ss_pred             CCccccccccccCC-CCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEE
Confidence               33455555543 458889999998 677766 89999999943  43322    2332 345789999999987 44


Q ss_pred             -EEECCCeEEEEECCC--CeE--EEEEeC----C--CCcEEEEEE--cCCEEE-EEeCCCeEEEEECCC----Cc---eE
Q psy7057         135 -SCSNDASIRVWDSTT--GKC--VHTMYG----H--PNFIYSVAA--HGDLIT-SGGEDQCVCVYQNKA----QN---SF  193 (557)
Q Consensus       135 -s~s~Dg~I~vwd~~~--~~~--~~~~~~----h--~~~V~~l~~--~~~~l~-s~s~Dg~I~iwd~~~----~~---~~  193 (557)
                       ++..++.|++|++..  ++.  ...+..    +  ...+.++++  ++++|+ ++..++.|++|++..    ..   .+
T Consensus       194 ~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~  273 (343)
T 1ri6_A          194 CVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQ  273 (343)
T ss_dssp             EEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEE
T ss_pred             EEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeee
Confidence             445889999999853  432  333331    1  235667888  566666 555899999999762    22   22


Q ss_pred             eeCCccEEEEEEcCCCc-EEEEE-cCCcEEEEecC
Q psy7057         194 MIPAMSVWAVAILPNSD-IVTGS-SDGIVRVFSAN  226 (557)
Q Consensus       194 ~~~~~~v~~v~~~p~g~-l~sg~-~Dg~I~iwd~~  226 (557)
                      ..+. .+.+++|+|+++ +++++ .++.|++|+++
T Consensus       274 ~~~~-~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d  307 (343)
T 1ri6_A          274 PTET-QPRGFNVDHSGKYLIAAGQKSHHISVYEIV  307 (343)
T ss_dssp             ECSS-SCCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred             cCCC-ccceEEECCCCCEEEEecCCCCeEEEEEEc
Confidence            2233 488999999998 66666 58999999765

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.71  E-value=1.7e-16  Score=167.56  Aligned_cols=178  Identities=11%  Similarity=0.048  Sum_probs=138.5

Q ss_pred             CcccEEEEEEcCCCc-EEEEECCCcEEEEcCC-------------------------------CCCCCCCCCEEE----E
Q psy7057          11 HSMDVRSLSVTPDGC-ILSASRDKSAKLWKPN-------------------------------DLSPGAKVNTLL----S   54 (557)
Q Consensus        11 H~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~-------------------------------~~~~~~~~~~l~----s   54 (557)
                      +...++.+++++++. +++++.++ +++|+..                               .+++++++++|+    +
T Consensus        35 ~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~s  113 (434)
T 2oit_A           35 PKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMS  113 (434)
T ss_dssp             CCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEE
T ss_pred             CCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEec
Confidence            344688999999877 77888887 8887531                               156788899999    7


Q ss_pred             EECCCeEEEEECCCC--------e---EEEEEcccCCcEEEEEEcCC-C-EEEEEECCCeEEEEeC-CCcEEEEEeCCCC
Q psy7057          55 ASWDMTAKLWCLESQ--------Q---CKLTIRQHEMAVWGVIQLAN-G-IIVTGCADKTIKLHSE-EGEFLKTLTGHTD  120 (557)
Q Consensus        55 gs~Dg~i~iwd~~~~--------~---~~~~l~~h~~~V~~l~~~~~-~-~l~sgs~dg~I~vwd~-~~~~~~~l~~h~~  120 (557)
                      |+.|++|++||+.++        +   ....+.+|...|.+++|+|+ + +|++++.|++|++||. ++..+....+|..
T Consensus       114 gs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~  193 (434)
T 2oit_A          114 SEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTV  193 (434)
T ss_dssp             TTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGG
T ss_pred             cCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCC
Confidence            889999999998654        1   24556779999999999997 4 8999999999999994 4555666678999


Q ss_pred             CEEEEEEeCCCe-EEEEECCCeEEEEECCCCeEEEEEeCCC-------CcEEEEEEcCC--EEEE-EeCCC------eEE
Q psy7057         121 CVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHTMYGHP-------NFIYSVAAHGD--LITS-GGEDQ------CVC  183 (557)
Q Consensus       121 ~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h~-------~~V~~l~~~~~--~l~s-~s~Dg------~I~  183 (557)
                      .|++++|+|++. |++|+.|++|++||++ ++....+..|.       ..|.+++|+++  ++++ ++.+|      .++
T Consensus       194 ~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~  272 (434)
T 2oit_A          194 AVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVV  272 (434)
T ss_dssp             CEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEE
T ss_pred             ceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceE
Confidence            999999999976 7899999999999988 66666665442       37899999433  3332 44443      389


Q ss_pred             EEECCCC
Q psy7057         184 VYQNKAQ  190 (557)
Q Consensus       184 iwd~~~~  190 (557)
                      +|+++..
T Consensus       273 i~~l~~~  279 (434)
T 2oit_A          273 MALLPKK  279 (434)
T ss_dssp             EEECCCT
T ss_pred             EEEeccC
Confidence            9997643

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=99.71  E-value=3.7e-16  Score=182.74  Aligned_cols=257  Identities=9%  Similarity=0.034  Sum_probs=194.9

Q ss_pred             EEeccCcccEEEEEEcCCCcEEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEECCCC
Q psy7057           6 TALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCLESQ   69 (557)
Q Consensus         6 ~~l~gH~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~   69 (557)
                      ..+.+|...+.+++|+++..+++++.|++++||.+..                ..+++++..|+.+. ++.|.+|++...
T Consensus       197 ~~l~~~~~~v~~~~~s~d~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~~~~~SpDG~~la~~~-~~~i~~~d~~~~  275 (1045)
T 1k32_A          197 KKIVDMSTHVSSPVIVGHRIYFITDIDGFGQIYSTDLDGKDLRKHTSFTDYYPRHLNTDGRRILFSK-GGSIYIFNPDTE  275 (1045)
T ss_dssp             EEEECCSSCCEEEEEETTEEEEEECTTSSCEEEEEETTSCSCEECCCCCSSCEEEEEESSSCEEEEE-TTEEEEECTTTC
T ss_pred             EECcCCCCcccceEEeCCEEEEEEeccCceEEEEEeCCCCcceEecCCCCcceeeEcCCCCEEEEEe-CCEEEEecCCce
Confidence            4568899999999999983366788899999997532                34567788888874 899999998554


Q ss_pred             eEEEEEcc-----------cCCcEEEEEEc-CCC-EEEEEECCCeEEEEeCCCcEEEEEeCCCC-CEEEEEEeCCCe-EE
Q psy7057          70 QCKLTIRQ-----------HEMAVWGVIQL-ANG-IIVTGCADKTIKLHSEEGEFLKTLTGHTD-CVRGLAVLNDTD-FV  134 (557)
Q Consensus        70 ~~~~~l~~-----------h~~~V~~l~~~-~~~-~l~sgs~dg~I~vwd~~~~~~~~l~~h~~-~V~~l~~~~~~~-lv  134 (557)
                      . +..+..           |...+.+++|+ |+| .|++++ ++.|.+|+..+.....+..|.. .+.+++|+ ++. ++
T Consensus       276 ~-l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~  352 (1045)
T 1k32_A          276 K-IEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFI  352 (1045)
T ss_dssp             C-EEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEE
T ss_pred             E-eeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEE
Confidence            4 335554           34468899999 999 677776 8899999976655666777887 89999999 876 77


Q ss_pred             EEECCCeEE-EEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC--c-eEeeCCccEEEEEEcCC
Q psy7057         135 SCSNDASIR-VWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ--N-SFMIPAMSVWAVAILPN  208 (557)
Q Consensus       135 s~s~Dg~I~-vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~--~-~~~~~~~~v~~v~~~p~  208 (557)
                      +++.+..+. +||+.+++.. .+.+|...+.+++|  +++.|++++.++.|++||+.+.  . .+..|...+.+++|+|+
T Consensus       353 ~~s~~~~l~~~~d~~~~~~~-~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpD  431 (1045)
T 1k32_A          353 HGTREGDFLGIYDYRTGKAE-KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDN  431 (1045)
T ss_dssp             EEETTEEEEEEEETTTCCEE-ECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTT
T ss_pred             EEECCCceEEEEECCCCCce-EecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCC
Confidence            888888888 9998877654 34478889999999  7889999999999999998765  2 33367778899999999


Q ss_pred             Cc-EEEEEcCC----------cEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecC
Q psy7057         209 SD-IVTGSSDG----------IVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSAN  271 (557)
Q Consensus       209 g~-l~sg~~Dg----------~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~  271 (557)
                      |+ |++++.++          .|++||+.+++..   ....+...+..+.+.++.. .++..+.++..++|+..
T Consensus       432 G~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~---~l~~~~~~~~~~~~spdG~-~l~~~s~~~~~~~~~~~  501 (1045)
T 1k32_A          432 SRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIF---AATTENSHDYAPAFDADSK-NLYYLSYRSLDPSPDRV  501 (1045)
T ss_dssp             SCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEE---ECSCSSSBEEEEEECTTSC-EEEEEESCCCCCEECSS
T ss_pred             CCeEEEEecCccccccCCCCCeEEEEECCCCcEE---EeeCCCcccCCceEcCCCC-EEEEEecccCCcCcchh
Confidence            99 77666644          8999999876532   1223344455666666655 46677777777777643

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.70  E-value=8.1e-17  Score=180.31  Aligned_cols=255  Identities=9%  Similarity=-0.031  Sum_probs=175.0

Q ss_pred             cEEEEEEcCCCcEEEEECCCcEEEEcCCC-------------------CCCCCCCCEEEEEECC---------CeEEEEE
Q psy7057          14 DVRSLSVTPDGCILSASRDKSAKLWKPND-------------------LSPGAKVNTLLSASWD---------MTAKLWC   65 (557)
Q Consensus        14 ~V~~l~~spdg~l~sgs~Dg~V~iWd~~~-------------------~~~~~~~~~l~sgs~D---------g~i~iwd   65 (557)
                      .+.+++|+|||+++..+.||+|++||+.+                   ++++|++++|++++.+         +.+.+||
T Consensus        18 ~~~~~~~spdg~~~~~~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d   97 (723)
T 1xfd_A           18 HDPEAKWISDTEFIYREQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSK   97 (723)
T ss_dssp             CCCCCCBSSSSCBCCCCSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEE
T ss_pred             cccccEEcCCCcEEEEeCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEE
Confidence            46789999999955558999999999754                   4578899999999875         7888999


Q ss_pred             CCCCeEEEEEc---ccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCC-CcEEEEEeCCCCCE------------------
Q psy7057          66 LESQQCKLTIR---QHEMAVWGVIQLANG-IIVTGCADKTIKLHSEE-GEFLKTLTGHTDCV------------------  122 (557)
Q Consensus        66 ~~~~~~~~~l~---~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~-~~~~~~l~~h~~~V------------------  122 (557)
                      +.+++. ..+.   .|...+.+++|+|+| .|+.++. +.|++||.. ++.......+...+                  
T Consensus        98 ~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~  175 (723)
T 1xfd_A           98 IPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTH  175 (723)
T ss_dssp             SSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSS
T ss_pred             CCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCc
Confidence            998875 3333   344558899999999 7777775 799999954 44444444443333                  


Q ss_pred             EEEEEeCCCe-EEEEECCC----------------------------------eEEEEECCCCeEEEEEeCC------CC
Q psy7057         123 RGLAVLNDTD-FVSCSNDA----------------------------------SIRVWDSTTGKCVHTMYGH------PN  161 (557)
Q Consensus       123 ~~l~~~~~~~-lvs~s~Dg----------------------------------~I~vwd~~~~~~~~~~~~h------~~  161 (557)
                      .+++|+|+++ |++++.|+                                  .|++||+.++++...+..+      ..
T Consensus       176 ~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~  255 (723)
T 1xfd_A          176 IAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREY  255 (723)
T ss_dssp             EEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSE
T ss_pred             ceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccc
Confidence            7899999987 66666442                                  7999999988865666654      56


Q ss_pred             cEEEEEE--cCCEEEEEeC----CCeEEEEECCCCc--e-Eee-CCccE----EEEEEcCCCc-EEE--EEcCC------
Q psy7057         162 FIYSVAA--HGDLITSGGE----DQCVCVYQNKAQN--S-FMI-PAMSV----WAVAILPNSD-IVT--GSSDG------  218 (557)
Q Consensus       162 ~V~~l~~--~~~~l~s~s~----Dg~I~iwd~~~~~--~-~~~-~~~~v----~~v~~~p~g~-l~s--g~~Dg------  218 (557)
                      .+.+++|  +|++|++.+.    +..|++||+.+.+  . +.. +...+    ..++|+|+|+ |+.  +..++      
T Consensus       256 ~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~  335 (723)
T 1xfd_A          256 YITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFY  335 (723)
T ss_dssp             EEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEE
T ss_pred             eeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCccee
Confidence            7888999  6777766643    3579999976652  2 222 22333    3789999998 553  45677      


Q ss_pred             cEEEEe-cCCCC---cchhHHHhcccceeEE-EeccCCCceeEEEEeCC--CcEEEEecCCC
Q psy7057         219 IVRVFS-ANPDR---QAEDAVQAQYAEEVKK-LKSANEQEIGGVKVSDD--GIVRVFSANPD  273 (557)
Q Consensus       219 ~I~iwd-~~~~~---~~~~~~~~~~~~~v~~-l~~~~~~~~~~vs~s~D--G~IrvW~~~~~  273 (557)
                      .|++|+ ...+.   ....   ......+.. +.+.++.....+++..|  +.+++|+++..
T Consensus       336 ~l~~~d~~~~~~~~~~~~l---~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~  394 (723)
T 1xfd_A          336 HITVSSSQPNSSNDNIQSI---TSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTV  394 (723)
T ss_dssp             EEEEECSSCCSSSCCCCBS---CCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSS
T ss_pred             EEEEEeccCCCCccceeEe---ecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCC
Confidence            466666 33333   2111   111222333 45666666544555566  89999998754

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=99.69  E-value=2.3e-15  Score=176.08  Aligned_cols=252  Identities=10%  Similarity=0.026  Sum_probs=190.3

Q ss_pred             CcccEEEEEEc-CCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEE-EEECCCCeE
Q psy7057          11 HSMDVRSLSVT-PDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAK-LWCLESQQC   71 (557)
Q Consensus        11 H~~~V~~l~~s-pdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~-iwd~~~~~~   71 (557)
                      |...|.+++|+ |||+ |++++ ++.|.+|++..                +.++ ++..|+.++.+..+. +|++.+++.
T Consensus       294 ~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~  371 (1045)
T 1k32_A          294 SIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKA  371 (1045)
T ss_dssp             ECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCE
T ss_pred             cccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCc
Confidence            45579999999 9998 77766 88999999765                3455 678899999888888 999988765


Q ss_pred             EEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeC-CCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECC---------
Q psy7057          72 KLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSE-EGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSND---------  139 (557)
Q Consensus        72 ~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~-~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~D---------  139 (557)
                      . .+.+|...+.+++|+|++ .|++++.++.|++||. +++....+.+|...+.+++|+|+++ +++++.+         
T Consensus       372 ~-~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~  450 (1045)
T 1k32_A          372 E-KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYV  450 (1045)
T ss_dssp             E-ECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCC
T ss_pred             e-EecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCC
Confidence            4 344788899999999999 8999999999999995 5566666668999999999999988 5566554         


Q ss_pred             -CeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC--------------------------
Q psy7057         140 -ASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ--------------------------  190 (557)
Q Consensus       140 -g~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~--------------------------  190 (557)
                       +.|++||+.+++ +..+..|...+.+++|  +|+.|+.++.++...+|+....                          
T Consensus       451 ~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  529 (1045)
T 1k32_A          451 MQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLV  529 (1045)
T ss_dssp             EEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCC
T ss_pred             CCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhccccccccCceeEEEEeCCCCCCccccC
Confidence             489999999887 6777888888999999  7888999888776666652110                          


Q ss_pred             --------------------ceEeeCCccEEEEEEcCCCc-EEE-------------EEcCCcEEEEecCCCCcchhHHH
Q psy7057         191 --------------------NSFMIPAMSVWAVAILPNSD-IVT-------------GSSDGIVRVFSANPDRQAEDAVQ  236 (557)
Q Consensus       191 --------------------~~~~~~~~~v~~v~~~p~g~-l~s-------------g~~Dg~I~iwd~~~~~~~~~~~~  236 (557)
                                          ..+..+...+..++++|++. +++             ......|++||+.+++....   
T Consensus       530 ~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~~~~~~~l---  606 (1045)
T 1k32_A          530 PRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTEV---  606 (1045)
T ss_dssp             CGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEEEE---
T ss_pred             cCccccccccccccCHhHceEEcCCCCCChhheEEcCCCeEEEEecccCcccccccccCCCceEEEEECCCCcEEEe---
Confidence                                12223456788999999998 543             12245688888877654321   


Q ss_pred             hcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCCh
Q psy7057         237 AQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDR  274 (557)
Q Consensus       237 ~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~~  274 (557)
                         ...+..+.+.++... +++++.| .|++|++.+++
T Consensus       607 ---~~~v~~~~~S~DG~~-l~~~~~~-~i~~~d~~~~~  639 (1045)
T 1k32_A          607 ---KNNLTDLRLSADRKT-VMVRKDD-GKIYTFPLEKP  639 (1045)
T ss_dssp             ---EEEEEEEEECTTSCE-EEEEETT-SCEEEEESSCT
T ss_pred             ---ecCcceEEECCCCCE-EEEEcCC-cEEEEeCccCc
Confidence               144566666666554 5555555 89999997766

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=99.69  E-value=8.1e-16  Score=168.13  Aligned_cols=245  Identities=12%  Similarity=0.108  Sum_probs=167.1

Q ss_pred             cccEEEEEEcCCCc-EEEEEC-CCcEEEEcCCC----------------CCCCCCCCEEEEEEC---CCeEEEEECCC--
Q psy7057          12 SMDVRSLSVTPDGC-ILSASR-DKSAKLWKPND----------------LSPGAKVNTLLSASW---DMTAKLWCLES--   68 (557)
Q Consensus        12 ~~~V~~l~~spdg~-l~sgs~-Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~---Dg~i~iwd~~~--   68 (557)
                      ..+|.+++|+|||+ |++++. ||+++||++..                +.++|+ ..+++++.   +...++|.+..  
T Consensus        21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~   99 (582)
T 3o4h_A           21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSR   99 (582)
T ss_dssp             HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTS
T ss_pred             ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccC
Confidence            55899999999998 887776 99999999754                456666 67777775   45556655432  


Q ss_pred             -CeEEEEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEeCCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECC----C
Q psy7057          69 -QQCKLTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSND----A  140 (557)
Q Consensus        69 -~~~~~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~D----g  140 (557)
                       +... .+..+. .+...+|+|++  .+++.+.++.+.+||..+.....+..+..  .+++|+|+|+ +++++.+    .
T Consensus       100 ~g~~~-~l~~~~-~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~~~~~~  175 (582)
T 3o4h_A          100 PGEEQ-RLEAVK-PMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG--FGFVSDIRGDLIAGLGFFGGGRV  175 (582)
T ss_dssp             TTCCE-ECTTSC-SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS--CEEEEEEETTEEEEEEEEETTEE
T ss_pred             CCccc-cccCCC-CceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC--ceEEECCCCCEEEEEEEcCCCCe
Confidence             2222 343322 23345666665  44555555555699965444444444433  7899999988 5556666    7


Q ss_pred             eEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCC--eEEEEECCCC--ceEeeCCccEEEEE--------Ec
Q psy7057         141 SIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQ--CVCVYQNKAQ--NSFMIPAMSVWAVA--------IL  206 (557)
Q Consensus       141 ~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg--~I~iwd~~~~--~~~~~~~~~v~~v~--------~~  206 (557)
                      .|++||+.+++.. .+..|...+.+++|  +|+.|+++..++  .|++||+.+.  ..+..+...+..++        |+
T Consensus       176 ~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s  254 (582)
T 3o4h_A          176 SLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVEDLELPSKDFSSYRPTAITWLGYL  254 (582)
T ss_dssp             EEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEEECCCSCSHHHHHCCSEEEEEEEC
T ss_pred             EEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEEEccCCCcChhhhhhccccceeEc
Confidence            8999999888754 67788889999999  788999888888  8999997665  33334444555566        99


Q ss_pred             CCCc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCc---EEEEecC
Q psy7057         207 PNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGI---VRVFSAN  271 (557)
Q Consensus       207 p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~---IrvW~~~  271 (557)
                      |+|. +++++.|+++++|++  ++...     .....+..+.+. + ...+++++.+..   +.+|+..
T Consensus       255 pdg~~~~~~~~~g~~~l~~~--g~~~~-----~~~~~v~~~~~s-d-g~~l~~~s~~~~p~~l~~~d~~  314 (582)
T 3o4h_A          255 PDGRLAVVARREGRSAVFID--GERVE-----APQGNHGRVVLW-R-GKLVTSHTSLSTPPRIVSLPSG  314 (582)
T ss_dssp             TTSCEEEEEEETTEEEEEET--TEEEC-----CCSSEEEEEEEE-T-TEEEEEEEETTEEEEEEEETTC
T ss_pred             CCCcEEEEEEcCCcEEEEEE--CCeec-----cCCCceEEEEec-C-CEEEEEEcCCCCCCeEEEEcCC
Confidence            9998 778889999999999  43322     223456666666 3 444566666643   5555543

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.69  E-value=2.8e-15  Score=167.83  Aligned_cols=258  Identities=12%  Similarity=0.042  Sum_probs=172.6

Q ss_pred             EEEeccCcc---cEEEEEEcCCCc-EEEEECC---------CcEEEEcCCC------------------CCCCCCCCEEE
Q psy7057           5 STALYGHSM---DVRSLSVTPDGC-ILSASRD---------KSAKLWKPND------------------LSPGAKVNTLL   53 (557)
Q Consensus         5 ~~~l~gH~~---~V~~l~~spdg~-l~sgs~D---------g~V~iWd~~~------------------~~~~~~~~~l~   53 (557)
                      ...+.+|..   .|.+++|||||+ |++++.+         +.+.+||+.+                  ++++|+++.|+
T Consensus        50 ~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la  129 (723)
T 1xfd_A           50 TVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLI  129 (723)
T ss_dssp             EEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEE
T ss_pred             EEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEE
Confidence            455666665   499999999999 8888764         7888999765                  56788999999


Q ss_pred             EEECCCeEEEEECCCCeEEEEEcccCCcE------------------EEEEEcCCC-EEEEEECCC--------------
Q psy7057          54 SASWDMTAKLWCLESQQCKLTIRQHEMAV------------------WGVIQLANG-IIVTGCADK--------------  100 (557)
Q Consensus        54 sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V------------------~~l~~~~~~-~l~sgs~dg--------------  100 (557)
                      .++. +.|++|++.+++.......+...+                  .+++|+|+| .|++++.|+              
T Consensus       130 ~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~  208 (723)
T 1xfd_A          130 FIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGS  208 (723)
T ss_dssp             EEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSS
T ss_pred             EEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCc
Confidence            9986 799999999887766665544333                  789999999 788777543              


Q ss_pred             --------------------eEEEEeCCC-cEEEEEeCC------CCCEEEEEEeCCCeEE-EEE----CCCeEEEEECC
Q psy7057         101 --------------------TIKLHSEEG-EFLKTLTGH------TDCVRGLAVLNDTDFV-SCS----NDASIRVWDST  148 (557)
Q Consensus       101 --------------------~I~vwd~~~-~~~~~l~~h------~~~V~~l~~~~~~~lv-s~s----~Dg~I~vwd~~  148 (557)
                                          .|++||..+ +....+..+      ...+.+++|+|+++++ +.+    .+..|++||+.
T Consensus       209 ~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~  288 (723)
T 1xfd_A          209 IYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDAT  288 (723)
T ss_dssp             SSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETT
T ss_pred             CCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCC
Confidence                                789999544 334566554      5679999999999855 443    23579999999


Q ss_pred             CCeEEEEEeC-CCCcEE----EEEE--cCCEEEE--EeCCC------eEEEEE-CCCC-----ceEeeCCccEEE-EEEc
Q psy7057         149 TGKCVHTMYG-HPNFIY----SVAA--HGDLITS--GGEDQ------CVCVYQ-NKAQ-----NSFMIPAMSVWA-VAIL  206 (557)
Q Consensus       149 ~~~~~~~~~~-h~~~V~----~l~~--~~~~l~s--~s~Dg------~I~iwd-~~~~-----~~~~~~~~~v~~-v~~~  206 (557)
                      ++++...+.. +...+.    +++|  +|+.|+.  +..++      .|.+|| ....     ..+......+.. ++|+
T Consensus       289 ~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~s  368 (723)
T 1xfd_A          289 TGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYD  368 (723)
T ss_dssp             TCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEE
T ss_pred             CCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEc
Confidence            9987776643 333332    6677  6775553  55677      577777 2322     233322334544 6999


Q ss_pred             CCCc-EEEEEcC---CcEEEEecCCCCcchhHHHhc---ccceeEEEeccCCCceeEEEEeCCC
Q psy7057         207 PNSD-IVTGSSD---GIVRVFSANPDRQAEDAVQAQ---YAEEVKKLKSANEQEIGGVKVSDDG  263 (557)
Q Consensus       207 p~g~-l~sg~~D---g~I~iwd~~~~~~~~~~~~~~---~~~~v~~l~~~~~~~~~~vs~s~DG  263 (557)
                      |+|+ |+..+.+   +.++||+++.........+..   +...+..+.+.++....+++++.++
T Consensus       369 pdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~~~~~  432 (723)
T 1xfd_A          369 EKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCEGPG  432 (723)
T ss_dssp             TTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEECCSSS
T ss_pred             CCCCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEEccCCC
Confidence            9998 6555554   789999986432110001111   2334555666666665555555443

>3l3f_X Protein DOA1, DOA1/UFD3; armadillo-like repeat structure, nucleus, UBL conjugation PA protein binding; 1.90A {Saccharomyces cerevisiae}

Probab=99.68  E-value=2.1e-17  Score=165.53  Aligned_cols=89  Identities=44%  Similarity=0.870  Sum_probs=64.3

Q ss_pred             EEecCCCceeEeeEEecCCCCccccCCeeEecceeeeeEEEEecCCCCCcccCCCccCCChHHHHHHHHHHcCCChHHHH
Q psy7057         336 SWSEASREWNKLGDVMGSAGGTQESSGKVLYQGKEYDFVFSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHLSQMFLE  415 (557)
Q Consensus       336 ~w~~~~~~W~~~g~v~~~~~~~~~~~~~~~~~g~~~d~v~~v~~~~g~~~~~l~~n~~~~~~~~a~~~~~~~~l~~~~~~  415 (557)
                      +|+  +++|+++|+|||+..  ..+++|+.|+|++|||||+||++||++++|||||.++|||.+|++||++|+||++|++
T Consensus         1 qw~--~~~W~~iG~vv~~~~--~~~~~k~~~~g~~yDyvf~vdi~~g~~~~klpyN~~~np~~~A~~F~~~~~l~~~y~~   76 (362)
T 3l3f_X            1 QFS--NSSWKKVGDVVGAGA--TGNDKKIEFEGKTYDYVFDVDIEDGKPPLKLPINVSDNPYTAADNFLARYELPMSYRD   76 (362)
T ss_dssp             --------------------------CCEEETTEEESEEEEECCSTTSCCEEEEECTTSCHHHHHHHHHHHTTCCGGGHH
T ss_pred             CCC--CCcceEeEEEECCCC--CCCCCceeecCcccceEEEEEcCCCCccccCCCcCCCCHHHHHHHHHHHcCCCHHHHH
Confidence            476  599999999998631  1257899999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCC
Q psy7057         416 QVANFIMTNSKSK  428 (557)
Q Consensus       416 ~v~~~i~~~~~~~  428 (557)
                      ||++||.+|+++.
T Consensus        77 ~i~~fi~~n~~~~   89 (362)
T 3l3f_X           77 QVVQFILKNTNGI   89 (362)
T ss_dssp             HHHHHHHHHCC--
T ss_pred             HHHHHHHhcCCCc
Confidence            9999999999865

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.68  E-value=1.1e-14  Score=147.90  Aligned_cols=218  Identities=12%  Similarity=0.141  Sum_probs=154.8

Q ss_pred             ccCcccEEEEEEcCCCcEEEEEC---CCcEEEEcCCC------------------CCCCCCCCEEEEEE-CCCeEEEEEC
Q psy7057           9 YGHSMDVRSLSVTPDGCILSASR---DKSAKLWKPND------------------LSPGAKVNTLLSAS-WDMTAKLWCL   66 (557)
Q Consensus         9 ~gH~~~V~~l~~spdg~l~sgs~---Dg~V~iWd~~~------------------~~~~~~~~~l~sgs-~Dg~i~iwd~   66 (557)
                      ..+...+..++|+|||+|++++.   ++.|.+|++..                  +++++++++|++++ .++++.+|++
T Consensus        36 ~~~~~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~  115 (347)
T 3hfq_A           36 LAATQNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKI  115 (347)
T ss_dssp             EEECSCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred             eeccCCcceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEe
Confidence            34556778899999999665554   68999999854                  56678899898888 6799999999


Q ss_pred             C-CC--eEEEEEcc---------cCCcEEEEEEcCCC-EEEEEECCCeEEEEeCC--CcEE--EEEeC-CCCCEEEEEEe
Q psy7057          67 E-SQ--QCKLTIRQ---------HEMAVWGVIQLANG-IIVTGCADKTIKLHSEE--GEFL--KTLTG-HTDCVRGLAVL  128 (557)
Q Consensus        67 ~-~~--~~~~~l~~---------h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~--~~~~--~~l~~-h~~~V~~l~~~  128 (557)
                      . ++  +.+..+..         +...+.+++|+|++ ++++...++.|++|+..  +...  ..+.. ....+..++|+
T Consensus       116 ~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~s  195 (347)
T 3hfq_A          116 AADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFS  195 (347)
T ss_dssp             CTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEEC
T ss_pred             CCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEEC
Confidence            6 33  33333322         12348899999998 66666678899999954  4332  22232 23468899999


Q ss_pred             CCCe-EE-EEECCCeEEEEECCC--CeE--EEEEeCCC------CcEEEEEE--cCCEE-EEEeCCCeEEEEECC---CC
Q psy7057         129 NDTD-FV-SCSNDASIRVWDSTT--GKC--VHTMYGHP------NFIYSVAA--HGDLI-TSGGEDQCVCVYQNK---AQ  190 (557)
Q Consensus       129 ~~~~-lv-s~s~Dg~I~vwd~~~--~~~--~~~~~~h~------~~V~~l~~--~~~~l-~s~s~Dg~I~iwd~~---~~  190 (557)
                      |+++ ++ ++..++.|++|++..  ++.  +..+....      ..+..+++  ++++| +++..++.|.+|++.   ..
T Consensus       196 pdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~  275 (347)
T 3hfq_A          196 PDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHL  275 (347)
T ss_dssp             TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCE
T ss_pred             CCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcE
Confidence            9987 44 456789999999764  543  33443333      35788888  67766 566678999999975   22


Q ss_pred             ---ceEeeCCccEEEEEEcCCCc-EEEEEc-CCcEEEEecC
Q psy7057         191 ---NSFMIPAMSVWAVAILPNSD-IVTGSS-DGIVRVFSAN  226 (557)
Q Consensus       191 ---~~~~~~~~~v~~v~~~p~g~-l~sg~~-Dg~I~iwd~~  226 (557)
                         ..+..+...+..++|+|+|+ |++++. ++.|.+|+++
T Consensus       276 ~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d  316 (347)
T 3hfq_A          276 TLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARD  316 (347)
T ss_dssp             EEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred             EEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEe
Confidence               23334455688999999998 666665 5899999664

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.68  E-value=2.5e-15  Score=150.90  Aligned_cols=239  Identities=10%  Similarity=0.024  Sum_probs=167.1

Q ss_pred             EEEEECCCcEEEEcCCC------------------CCCCCCCCEE-EEEECCCeEEEEECCCCeEEEEEcc-c----CCc
Q psy7057          26 ILSASRDKSAKLWKPND------------------LSPGAKVNTL-LSASWDMTAKLWCLESQQCKLTIRQ-H----EMA   81 (557)
Q Consensus        26 l~sgs~Dg~V~iWd~~~------------------~~~~~~~~~l-~sgs~Dg~i~iwd~~~~~~~~~l~~-h----~~~   81 (557)
                      |++++.+++|++||+.+                  +.++++++.+ ++++.++.|.+||+.+++.+..+.. +    ...
T Consensus         4 ~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~   83 (337)
T 1pby_B            4 ILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKS   83 (337)
T ss_dssp             EEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEEC
T ss_pred             EEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccccc
Confidence            77889999999998765                  2245667665 4555678999999999988777653 2    125


Q ss_pred             EEEEEEcCCC-EEEEEE------------CCCeEEEEeCC-CcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEEEEE
Q psy7057          82 VWGVIQLANG-IIVTGC------------ADKTIKLHSEE-GEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVWD  146 (557)
Q Consensus        82 V~~l~~~~~~-~l~sgs------------~dg~I~vwd~~-~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd  146 (557)
                      +.+++|+|++ .+++++            .++.|.+||.. ++.+..+.. ...+.+++|+|++. ++++  ++.|.+||
T Consensus        84 ~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d  160 (337)
T 1pby_B           84 LFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMD  160 (337)
T ss_dssp             TTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEE
T ss_pred             ccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEE
Confidence            6689999998 777775            57999999954 455555553 55688899999987 5555  68999999


Q ss_pred             CCCCeEEEEEeCCC--CcEEEEEEcCCEEEEEe-CCC-----------------------eEEEEECCCCce----EeeC
Q psy7057         147 STTGKCVHTMYGHP--NFIYSVAAHGDLITSGG-EDQ-----------------------CVCVYQNKAQNS----FMIP  196 (557)
Q Consensus       147 ~~~~~~~~~~~~h~--~~V~~l~~~~~~l~s~s-~Dg-----------------------~I~iwd~~~~~~----~~~~  196 (557)
                      +.+++.+..+..+.  ..+ .+..++..++..+ .++                       .|.+||..+.+.    +..+
T Consensus       161 ~~~~~~~~~~~~~~~~~~~-~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~  239 (337)
T 1pby_B          161 PEAGTLVEDKPIQSWEAET-YAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIM  239 (337)
T ss_dssp             TTTTEEEEEECSTTTTTTT-BCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEEC
T ss_pred             CCCCcEeeeeeccccCCCc-eeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCC
Confidence            99999888776543  222 2233555443333 222                       468999776632    3344


Q ss_pred             CccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCCh
Q psy7057         197 AMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDR  274 (557)
Q Consensus       197 ~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~~  274 (557)
                      ...+.+++|+|+++ ++++  ++.|++||+.+.+......   ....+..+.+.++.. .+++++.|+.|++|++...+
T Consensus       240 ~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~---~~~~~~~~~~s~dg~-~l~~~~~~~~i~v~d~~~~~  312 (337)
T 1pby_B          240 DVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVP---LPHSYYSVNVSTDGS-TVWLGGALGDLAAYDAETLE  312 (337)
T ss_dssp             SSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEE---CSSCCCEEEECTTSC-EEEEESBSSEEEEEETTTCC
T ss_pred             CCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceec---CCCceeeEEECCCCC-EEEEEcCCCcEEEEECcCCc
Confidence            55788999999998 5555  7999999998765543221   123355666666655 45556889999999987653

>3pst_A Protein DOA1; protein degradation, CDC48, ubiquitin, nuclear protein; 2.00A {Saccharomyces cerevisiae} PDB: 3psp_A

Probab=99.68  E-value=2.6e-17  Score=167.12  Aligned_cols=66  Identities=47%  Similarity=0.888  Sum_probs=61.9

Q ss_pred             eeEecceeeeeEEEEecCCCCCcccCCCccCCChHHHHHHHHHHcCCChHHHHHHHHHHHhcCCCC
Q psy7057         363 KVLYQGKEYDFVFSVDIEEGKPPLKLPYNVSEDPWHAAQAFIHTHHLSQMFLEQVANFIMTNSKSK  428 (557)
Q Consensus       363 ~~~~~g~~~d~v~~v~~~~g~~~~~l~~n~~~~~~~~a~~~~~~~~l~~~~~~~v~~~i~~~~~~~  428 (557)
                      |+.|+|++|||||+||++||+|++|||||.++|||.+|++||.+|+||++|++||++||.+|+++.
T Consensus        87 k~~~~Gk~YDyvf~Vdi~~g~p~lkLpyN~~~np~~~A~~Fi~~~~L~~~y~~qi~~FI~~N~~~~  152 (425)
T 3pst_A           87 KIEFEGKTYDYVFDVDIEDGKPPLKLPINVSDNPYTAADNFLARYELPMSYRDQVVQLILKNTNGI  152 (425)
T ss_dssp             CEEETTEEESEEEEECCSTTCCCEEEEECTTCCHHHHHHHHHHHHTCCGGGHHHHHHHHHHHC---
T ss_pred             ceeecCcccceEEEEEcCCCCccccCCccCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCc
Confidence            578999999999999999999999999999999999999999999999999999999999999865

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.67  E-value=1.2e-14  Score=146.25  Aligned_cols=221  Identities=9%  Similarity=0.042  Sum_probs=160.6

Q ss_pred             CCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEEC-CCeEEEEeC-CCcE-EEEEeCCCCCEEE
Q psy7057          49 VNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCA-DKTIKLHSE-EGEF-LKTLTGHTDCVRG  124 (557)
Q Consensus        49 ~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~-dg~I~vwd~-~~~~-~~~l~~h~~~V~~  124 (557)
                      ...+++++.+++|++||+.+++....+..+...+ +++|+|++ .+++++. ++.|.+||. +++. ...+..+..+..+
T Consensus        10 ~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~   88 (331)
T 3u4y_A           10 NFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMAD   88 (331)
T ss_dssp             CEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCC
T ss_pred             CEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccc
Confidence            3457788889999999999999888887777777 99999998 4555555 899999994 5555 6666667666666


Q ss_pred             EEEeCCCeEEEEECCC----eEEEEECCCCeEEEEEeCCCCcEEEEEE--cCC-EEEEEeCCCe-EEEEECCCCc-----
Q psy7057         125 LAVLNDTDFVSCSNDA----SIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGD-LITSGGEDQC-VCVYQNKAQN-----  191 (557)
Q Consensus       125 l~~~~~~~lvs~s~Dg----~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~-~l~s~s~Dg~-I~iwd~~~~~-----  191 (557)
                      ++++|++.++.++.+.    .|.+||+.+++.+..+..+ ....++++  +++ +++++..++. |.+|++....     
T Consensus        89 ~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~  167 (331)
T 3u4y_A           89 VDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP-YDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDT  167 (331)
T ss_dssp             EEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECC-TTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEE
T ss_pred             eEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECC-CCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeec
Confidence            9999998744344443    8999999999988887644 45688888  565 4555566688 9999965421     


Q ss_pred             --eEeeCCccEEEEEEcCCCc-EEE-EEcCCcEEEEecCCCCc---chhHHHhcccceeEEEeccCCCceeEEEEeCCCc
Q psy7057         192 --SFMIPAMSVWAVAILPNSD-IVT-GSSDGIVRVFSANPDRQ---AEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGI  264 (557)
Q Consensus       192 --~~~~~~~~v~~v~~~p~g~-l~s-g~~Dg~I~iwd~~~~~~---~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~  264 (557)
                        ........+..++|+|+|+ +++ +..++.|++|++.+++.   .....   ....+..+.+.++.....++...++.
T Consensus       168 ~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~---~~~~~~~~~~spdg~~l~v~~~~~~~  244 (331)
T 3u4y_A          168 GQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVG---TNNLPGTIVVSRDGSTVYVLTESTVD  244 (331)
T ss_dssp             EEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEE---CSSCCCCEEECTTSSEEEEECSSEEE
T ss_pred             CCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeecc---CCCCCceEEECCCCCEEEEEEcCCCE
Confidence              1112345689999999998 544 44689999999987765   22111   12344566677776655666667889


Q ss_pred             EEEEecCCCh
Q psy7057         265 VRVFSANPDR  274 (557)
Q Consensus       265 IrvW~~~~~~  274 (557)
                      |.+|+...++
T Consensus       245 i~~~d~~~~~  254 (331)
T 3u4y_A          245 VFNFNQLSGT  254 (331)
T ss_dssp             EEEEETTTTE
T ss_pred             EEEEECCCCc
Confidence            9999987653

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.67  E-value=9.8e-15  Score=147.82  Aligned_cols=226  Identities=12%  Similarity=0.056  Sum_probs=169.0

Q ss_pred             CCCCCCCCEEEEEEC-------CCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEe-CCCcEE
Q psy7057          43 LSPGAKVNTLLSASW-------DMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHS-EEGEFL  112 (557)
Q Consensus        43 ~~~~~~~~~l~sgs~-------Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd-~~~~~~  112 (557)
                      +.++++++.+++++.       ++.|.+||+.+++.+..+... ..+.+++++|++  .+++...++.|.+|| .+++.+
T Consensus        46 ~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~  124 (353)
T 3vgz_A           46 MAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHND-LKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVK  124 (353)
T ss_dssp             EEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEES-SCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEE
T ss_pred             eEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecC-CCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeE
Confidence            567778888888874       568999999999988887643 446789999988  455556689999999 467777


Q ss_pred             EEEeCCCC---------CEEEEEEeCCCe-EEEEE--CCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeC
Q psy7057         113 KTLTGHTD---------CVRGLAVLNDTD-FVSCS--NDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGE  178 (557)
Q Consensus       113 ~~l~~h~~---------~V~~l~~~~~~~-lvs~s--~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~  178 (557)
                      ..+..+..         .+.+++++|++. +++++  .++.|.+||+.+++.+..+..+...+.++++  +++.+++++.
T Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~  204 (353)
T 3vgz_A          125 GRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNA  204 (353)
T ss_dssp             EEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECT
T ss_pred             EEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcC
Confidence            77765442         278999999976 44444  5789999999999999888756666777777  7788999999


Q ss_pred             CCeEEEEECCCCc---eEee----CCccEEEEEEcCCCc-EEEEE-cCCcEEEEecCCCCcchhHHHhcccceeEEEecc
Q psy7057         179 DQCVCVYQNKAQN---SFMI----PAMSVWAVAILPNSD-IVTGS-SDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSA  249 (557)
Q Consensus       179 Dg~I~iwd~~~~~---~~~~----~~~~v~~v~~~p~g~-l~sg~-~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~  249 (557)
                      ++.|.+||..+..   .+..    +...+.+++++|+++ +++++ .++.|.+||..+++........    ....+.+.
T Consensus       205 ~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~----~~~~~~~s  280 (353)
T 3vgz_A          205 DGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAP----ESLAVLFN  280 (353)
T ss_dssp             TSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECS----SCCCEEEE
T ss_pred             CCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcC----CCceEEEC
Confidence            9999999987763   2332    345688899999998 55554 4599999999877654322211    11345566


Q ss_pred             CCCceeEEEEeCCCcEEEEecCCC
Q psy7057         250 NEQEIGGVKVSDDGIVRVFSANPD  273 (557)
Q Consensus       250 ~~~~~~~vs~s~DG~IrvW~~~~~  273 (557)
                      +......++...++.|.+|+....
T Consensus       281 ~dg~~l~v~~~~~~~v~~~d~~~~  304 (353)
T 3vgz_A          281 PARNEAYVTHRQAGKVSVIDAKSY  304 (353)
T ss_dssp             TTTTEEEEEETTTTEEEEEETTTT
T ss_pred             CCCCEEEEEECCCCeEEEEECCCC
Confidence            666656677778999999997754

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.66  E-value=1.3e-14  Score=145.65  Aligned_cols=223  Identities=10%  Similarity=0.053  Sum_probs=160.7

Q ss_pred             EEEEEecc-Ccc-cEEEEEEcCCCc-E-EEEECCCcEEEEcCCC---------------------CCCCCCCCEEEEEE-
Q psy7057           3 KLSTALYG-HSM-DVRSLSVTPDGC-I-LSASRDKSAKLWKPND---------------------LSPGAKVNTLLSAS-   56 (557)
Q Consensus         3 kl~~~l~g-H~~-~V~~l~~spdg~-l-~sgs~Dg~V~iWd~~~---------------------~~~~~~~~~l~sgs-   56 (557)
                      ++.+.+.. +.. .+.+++|+|+|+ + ++++.++.|.+||+.+                     +.+++++++|++++ 
T Consensus        22 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~  101 (337)
T 1pby_B           22 AVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYES  101 (337)
T ss_dssp             EEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEE
T ss_pred             cEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEec
Confidence            45555543 222 488999999996 4 4566789999999865                     23456788888886 


Q ss_pred             -----------CCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeC-CCcEEEEEeCCCCCEE
Q psy7057          57 -----------WDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSE-EGEFLKTLTGHTDCVR  123 (557)
Q Consensus        57 -----------~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~-~~~~~~~l~~h~~~V~  123 (557)
                                 .++.|.+||+.+++.+..+.. ...+.+++|+|++ .++++  ++.|.+||. +++.+..+..+.. ..
T Consensus       102 ~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~-~~  177 (337)
T 1pby_B          102 PVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSW-EA  177 (337)
T ss_dssp             EEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTT-TT
T ss_pred             ccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeecccc-CC
Confidence                       679999999999988877764 4567789999998 56666  689999995 5566666654431 01


Q ss_pred             EEEEeCCCe-EE-EEECCC-----------------------eEEEEECCCCeEE-EEEeCCCCcEEEEEE--cCCEEEE
Q psy7057         124 GLAVLNDTD-FV-SCSNDA-----------------------SIRVWDSTTGKCV-HTMYGHPNFIYSVAA--HGDLITS  175 (557)
Q Consensus       124 ~l~~~~~~~-lv-s~s~Dg-----------------------~I~vwd~~~~~~~-~~~~~h~~~V~~l~~--~~~~l~s  175 (557)
                      .+.++|++. ++ ++..++                       .|.+||+.+++.. ..+..+...+.++++  +++++++
T Consensus       178 ~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~  257 (337)
T 1pby_B          178 ETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFG  257 (337)
T ss_dssp             TTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEE
T ss_pred             CceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEE
Confidence            226778766 32 332333                       4789999988764 234456677888888  6778877


Q ss_pred             EeCCCeEEEEECCCCceE--eeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcc
Q psy7057         176 GGEDQCVCVYQNKAQNSF--MIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQA  231 (557)
Q Consensus       176 ~s~Dg~I~iwd~~~~~~~--~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~  231 (557)
                      +  ++.|++||+.+.+.+  ......+.+++|+|+++ +++++.++.|++||+.+.+..
T Consensus       258 ~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~  314 (337)
T 1pby_B          258 A--YNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKK  314 (337)
T ss_dssp             E--ESEEEEEETTTTEEEEEEECSSCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEE
T ss_pred             e--CCeEEEEECCCCcCcceecCCCceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEE
Confidence            7  799999998776322  22335678999999998 778888999999999876543

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.66  E-value=4.6e-15  Score=149.84  Aligned_cols=209  Identities=10%  Similarity=0.062  Sum_probs=152.7

Q ss_pred             EEEEcCCCc-EEEEECCCcEEEEcCCC-----------------CCCCCCCCEEE-EEECCCeEEEEECCCCeEEEEEcc
Q psy7057          17 SLSVTPDGC-ILSASRDKSAKLWKPND-----------------LSPGAKVNTLL-SASWDMTAKLWCLESQQCKLTIRQ   77 (557)
Q Consensus        17 ~l~~spdg~-l~sgs~Dg~V~iWd~~~-----------------~~~~~~~~~l~-sgs~Dg~i~iwd~~~~~~~~~l~~   77 (557)
                      .++++++++ +++++.+++|++||+.+                 +.++++++.++ ++..++.|.+||+.+++.+..+..
T Consensus         4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~   83 (349)
T 1jmx_B            4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANL   83 (349)
T ss_dssp             CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEES
T ss_pred             cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEc
Confidence            456778887 77999999999999876                 34566777655 555789999999999988877763


Q ss_pred             cC------CcEEEEEEcCCC-EEEEEECC------------CeEEEEeCCC----cEEEEEeCCCCCEEEEEEeCCCeEE
Q psy7057          78 HE------MAVWGVIQLANG-IIVTGCAD------------KTIKLHSEEG----EFLKTLTGHTDCVRGLAVLNDTDFV  134 (557)
Q Consensus        78 h~------~~V~~l~~~~~~-~l~sgs~d------------g~I~vwd~~~----~~~~~l~~h~~~V~~l~~~~~~~lv  134 (557)
                      +.      ..+.+++|+|++ .+++++.+            +.|.+||...    ..+..+. +...+.+++|+|++.++
T Consensus        84 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~l~  162 (349)
T 1jmx_B           84 SSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGSLY  162 (349)
T ss_dssp             CCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSCEE
T ss_pred             ccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCcEE
Confidence            32      236789999998 77777755            8999999432    2233444 34468899999998866


Q ss_pred             EEECCCeEEEEECCCCeEEEEEeCCC------------------------------------------------------
Q psy7057         135 SCSNDASIRVWDSTTGKCVHTMYGHP------------------------------------------------------  160 (557)
Q Consensus       135 s~s~Dg~I~vwd~~~~~~~~~~~~h~------------------------------------------------------  160 (557)
                      +++.  .|.+||+.+++.+..+..+.                                                      
T Consensus       163 ~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  240 (349)
T 1jmx_B          163 VAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDL  240 (349)
T ss_dssp             EESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEET
T ss_pred             EccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEec
Confidence            6544  49999999998887765332                                                      


Q ss_pred             --------------CcEEEEEE---cCCEEEEEeCCCeEEEEECCCCceE--eeCCccEEEEEEcCCCc-EEEEEcCCcE
Q psy7057         161 --------------NFIYSVAA---HGDLITSGGEDQCVCVYQNKAQNSF--MIPAMSVWAVAILPNSD-IVTGSSDGIV  220 (557)
Q Consensus       161 --------------~~V~~l~~---~~~~l~s~s~Dg~I~iwd~~~~~~~--~~~~~~v~~v~~~p~g~-l~sg~~Dg~I  220 (557)
                                    ..+.++++   ++++++++  ++.|++||+.+.+.+  ......+.+++|+|+++ |++++.++.|
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~v  318 (349)
T 1jmx_B          241 KTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLDHTYYCVAFDKKGDKLYLGGTFNDL  318 (349)
T ss_dssp             TTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECSSSSCEEEESBSSEE
T ss_pred             cCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCCCCccceEECCCCCEEEEecCCCeE
Confidence                          01223333   45577766  889999998776322  22344678999999987 7778889999


Q ss_pred             EEEecCCCCc
Q psy7057         221 RVFSANPDRQ  230 (557)
Q Consensus       221 ~iwd~~~~~~  230 (557)
                      ++||..+.+.
T Consensus       319 ~v~d~~~~~~  328 (349)
T 1jmx_B          319 AVFNPDTLEK  328 (349)
T ss_dssp             EEEETTTTEE
T ss_pred             EEEeccccce
Confidence            9999987653

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=99.66  E-value=1.3e-15  Score=171.05  Aligned_cols=226  Identities=9%  Similarity=-0.001  Sum_probs=167.2

Q ss_pred             CCCCCCCCEEEEEEC-CC-----eEEEEECCCCeEEEEEcccCC------------------------cEEEEEEcCCC-
Q psy7057          43 LSPGAKVNTLLSASW-DM-----TAKLWCLESQQCKLTIRQHEM------------------------AVWGVIQLANG-   91 (557)
Q Consensus        43 ~~~~~~~~~l~sgs~-Dg-----~i~iwd~~~~~~~~~l~~h~~------------------------~V~~l~~~~~~-   91 (557)
                      +.+++++++|++++. |+     +|++||+.+++....+..+..                        .|.+++|+|+| 
T Consensus        42 ~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~  121 (741)
T 2ecf_A           42 PKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQ  121 (741)
T ss_dssp             EEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSS
T ss_pred             ceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCC
Confidence            567889999999998 88     999999999988777765533                        37899999999 


Q ss_pred             EEEEEECCCeEEEEeCCCc---EEEEEeCCCCCEEEEEEeCCCeE-EEEECCCeEEEEECCCCeEEEEEeCCCCc-----
Q psy7057          92 IIVTGCADKTIKLHSEEGE---FLKTLTGHTDCVRGLAVLNDTDF-VSCSNDASIRVWDSTTGKCVHTMYGHPNF-----  162 (557)
Q Consensus        92 ~l~sgs~dg~I~vwd~~~~---~~~~l~~h~~~V~~l~~~~~~~l-vs~s~Dg~I~vwd~~~~~~~~~~~~h~~~-----  162 (557)
                      .|++++. +.|++||..+.   ....+..|...+.+++|+|+|+. ++++ ++.|++||+.+++.......+...     
T Consensus       122 ~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~~~~~~g~  199 (741)
T 2ecf_A          122 RLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADGSTTIGNGI  199 (741)
T ss_dssp             EEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCCCSSEEESC
T ss_pred             EEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCCccceeccc
Confidence            7777776 99999997665   66677788889999999999984 4554 679999999988876655444432     


Q ss_pred             -----------EEEEEE--cCCEEEEEeCCC---------------------------------eEEEEECCC-C--ceE
Q psy7057         163 -----------IYSVAA--HGDLITSGGEDQ---------------------------------CVCVYQNKA-Q--NSF  193 (557)
Q Consensus       163 -----------V~~l~~--~~~~l~s~s~Dg---------------------------------~I~iwd~~~-~--~~~  193 (557)
                                 +.+++|  +|+.|++++.|+                                 .|++||+.+ .  ..+
T Consensus       200 ~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~  279 (741)
T 2ecf_A          200 AEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWI  279 (741)
T ss_dssp             CCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEE
T ss_pred             cceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEe
Confidence                       366777  788888887665                                 788999766 4  223


Q ss_pred             e---eCCccEEEEEEcCCCc-EEEEEc-----CCcEEEEecCCCCcchhHHHhc--ccceeEEEeccCCCceeEEEEeCC
Q psy7057         194 M---IPAMSVWAVAILPNSD-IVTGSS-----DGIVRVFSANPDRQAEDAVQAQ--YAEEVKKLKSANEQEIGGVKVSDD  262 (557)
Q Consensus       194 ~---~~~~~v~~v~~~p~g~-l~sg~~-----Dg~I~iwd~~~~~~~~~~~~~~--~~~~v~~l~~~~~~~~~~vs~s~D  262 (557)
                      .   .+...+.+++| |+|+ |++++.     +..|++||+.+++.........  +...+..+.+.++.. .+++++.|
T Consensus       280 ~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~-~~~~~~~~  357 (741)
T 2ecf_A          280 DLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGS-ILWSSERT  357 (741)
T ss_dssp             CCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSC-EEEEECTT
T ss_pred             cCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCe-EEEEecCC
Confidence            2   35668999999 9999 665543     5679999998776432221110  111234556666666 67788899


Q ss_pred             CcEEEEecCC
Q psy7057         263 GIVRVFSANP  272 (557)
Q Consensus       263 G~IrvW~~~~  272 (557)
                      |.++||.++.
T Consensus       358 g~~~l~~~~~  367 (741)
T 2ecf_A          358 GFQHLYRIDS  367 (741)
T ss_dssp             SSCEEEEECS
T ss_pred             CccEEEEEcC
Confidence            9999998763

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.65  E-value=2.6e-14  Score=145.06  Aligned_cols=229  Identities=10%  Similarity=0.050  Sum_probs=152.8

Q ss_pred             CCCCCCCCEEEEEEC---CCeEEEEECCCCe--EEEEEcccCCcEEEEEEcCCC-EEEEEE-CCCeEEEEeCC--Cc--E
Q psy7057          43 LSPGAKVNTLLSASW---DMTAKLWCLESQQ--CKLTIRQHEMAVWGVIQLANG-IIVTGC-ADKTIKLHSEE--GE--F  111 (557)
Q Consensus        43 ~~~~~~~~~l~sgs~---Dg~i~iwd~~~~~--~~~~l~~h~~~V~~l~~~~~~-~l~sgs-~dg~I~vwd~~--~~--~  111 (557)
                      ++++++++ |++++.   ++.|.+|++.+++  .+..+..+...+..++|+|++ .|++++ .++.|.+|+..  +.  .
T Consensus        45 ~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~  123 (347)
T 3hfq_A           45 LALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTL  123 (347)
T ss_dssp             EEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEE
T ss_pred             EEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeee
Confidence            56677888 555554   6899999998775  445555677888899999998 677777 78999999943  22  2


Q ss_pred             EEEEeC---------CCCCEEEEEEeCCCeEE-EEECCCeEEEEECC-CCeEE--EEEeCC-CCcEEEEEE--cCCEEEE
Q psy7057         112 LKTLTG---------HTDCVRGLAVLNDTDFV-SCSNDASIRVWDST-TGKCV--HTMYGH-PNFIYSVAA--HGDLITS  175 (557)
Q Consensus       112 ~~~l~~---------h~~~V~~l~~~~~~~lv-s~s~Dg~I~vwd~~-~~~~~--~~~~~h-~~~V~~l~~--~~~~l~s  175 (557)
                      +..+..         +...+.+++++|+++++ +...++.|++|++. +++..  ..+..+ ...+..++|  +++++++
T Consensus       124 ~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v  203 (347)
T 3hfq_A          124 TDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFL  203 (347)
T ss_dssp             EEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEE
T ss_pred             cceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEE
Confidence            333322         12348899999998855 55568899999998 55433  223333 336778888  6775554


Q ss_pred             -EeCCCeEEEEECCC--C-----ceEeeCC------ccEEEEEEcCCCc-E-EEEEcCCcEEEEecCCC-CcchhHHHhc
Q psy7057         176 -GGEDQCVCVYQNKA--Q-----NSFMIPA------MSVWAVAILPNSD-I-VTGSSDGIVRVFSANPD-RQAEDAVQAQ  238 (557)
Q Consensus       176 -~s~Dg~I~iwd~~~--~-----~~~~~~~------~~v~~v~~~p~g~-l-~sg~~Dg~I~iwd~~~~-~~~~~~~~~~  238 (557)
                       +..++.|++|++..  .     ..+....      ..+..++|+|+|+ + ++...++.|++|++... ..........
T Consensus       204 ~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~  283 (347)
T 3hfq_A          204 AGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQIST  283 (347)
T ss_dssp             EETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEEC
T ss_pred             EeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEec
Confidence             56788999999653  2     1222222      3488999999998 5 45666899999998732 1111111111


Q ss_pred             ccceeEEEeccCCCceeEEEEeCCCcEEEEecCC
Q psy7057         239 YAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANP  272 (557)
Q Consensus       239 ~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~  272 (557)
                      +...+..+.+.++.....++...++.|++|+++.
T Consensus       284 ~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~  317 (347)
T 3hfq_A          284 EGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDL  317 (347)
T ss_dssp             SSSCCCEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred             CCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeC
Confidence            2234566777777665555556679999997654

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=99.65  E-value=1.7e-13  Score=135.16  Aligned_cols=217  Identities=13%  Similarity=0.279  Sum_probs=160.8

Q ss_pred             cCcccEEEEEEcCCCcE-EEEECCCcEEEEcCCC---------------------CCC-CCCCCEEEEEEC-CCeEEEEE
Q psy7057          10 GHSMDVRSLSVTPDGCI-LSASRDKSAKLWKPND---------------------LSP-GAKVNTLLSASW-DMTAKLWC   65 (557)
Q Consensus        10 gH~~~V~~l~~spdg~l-~sgs~Dg~V~iWd~~~---------------------~~~-~~~~~~l~sgs~-Dg~i~iwd   65 (557)
                      +|-....++++++++.| ++.+.++.|.+||...                     +++ .+++..+++... ++.|++|+
T Consensus        27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d  106 (286)
T 1q7f_A           27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN  106 (286)
T ss_dssp             TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC
T ss_pred             CccCCCceEEECCCCCEEEEECCCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC
Confidence            45578999999999994 5557789999998765                     122 233444444433 88999999


Q ss_pred             CCCCeEEEEEcc-cCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcEEEEEe--CCCCCEEEEEEeCCCeEE-EEECCC
Q psy7057          66 LESQQCKLTIRQ-HEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFLKTLT--GHTDCVRGLAVLNDTDFV-SCSNDA  140 (557)
Q Consensus        66 ~~~~~~~~~l~~-h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~~~l~--~h~~~V~~l~~~~~~~lv-s~s~Dg  140 (557)
                       .+++.+..+.. +...+.++++.+++ ++++...++.|.+|+.+++.+..+.  .+...+.++++++++.++ +.+.++
T Consensus       107 -~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~  185 (286)
T 1q7f_A          107 -QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAH  185 (286)
T ss_dssp             -TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGT
T ss_pred             -CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCC
Confidence             56677766643 45678999999988 6666667899999998888777765  455679999999998855 556789


Q ss_pred             eEEEEECCCCeEEEEEeCC--CCcEEEEEE--cCCEEEEEeCCC-eEEEEECCCC--ceEeeCC--ccEEEEEEcCCCcE
Q psy7057         141 SIRVWDSTTGKCVHTMYGH--PNFIYSVAA--HGDLITSGGEDQ-CVCVYQNKAQ--NSFMIPA--MSVWAVAILPNSDI  211 (557)
Q Consensus       141 ~I~vwd~~~~~~~~~~~~h--~~~V~~l~~--~~~~l~s~s~Dg-~I~iwd~~~~--~~~~~~~--~~v~~v~~~p~g~l  211 (557)
                      .|++||. +++.+..+..+  ...+..|++  +++++++...++ .|++|+....  ..+..+.  ..+.+++++|+|++
T Consensus       186 ~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~g~l  264 (286)
T 1q7f_A          186 CVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLISALESKVKHAQCFDVALMDDGSV  264 (286)
T ss_dssp             EEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSCEEEEEEESSCCSCEEEEEEETTTEE
T ss_pred             EEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCCEEEEEcccCCCCcceeEEECCCCcE
Confidence            9999996 56777777543  357888998  567777777775 9999996533  3444333  24789999999996


Q ss_pred             EEEEcCCcEEEEecCCC
Q psy7057         212 VTGSSDGIVRVFSANPD  228 (557)
Q Consensus       212 ~sg~~Dg~I~iwd~~~~  228 (557)
                      ++++.|++|++|+....
T Consensus       265 ~vs~~~~~v~v~~~~~~  281 (286)
T 1q7f_A          265 VLASKDYRLYIYRYVQL  281 (286)
T ss_dssp             EEEETTTEEEEEECSCC
T ss_pred             EEECCCCeEEEEEcccc
Confidence            65578999999998654

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=99.62  E-value=2.4e-14  Score=159.88  Aligned_cols=223  Identities=14%  Similarity=0.146  Sum_probs=163.2

Q ss_pred             EEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC-----------------------------------CCCCCCC
Q psy7057           6 TALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND-----------------------------------LSPGAKV   49 (557)
Q Consensus         6 ~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~-----------------------------------~~~~~~~   49 (557)
                      ..+..|...+.+++|+|||+ |++ +.++.|++|++.+                                   +.++|++
T Consensus       114 ~~l~~~~~~~~~~~~SpdG~~la~-~~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg  192 (706)
T 2z3z_A          114 TYLFDTNEETASLDFSPVGDRVAY-VRNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKG  192 (706)
T ss_dssp             EEEECCTTCCTTCEECTTSSEEEE-EETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTS
T ss_pred             EEccCCcccccCCcCCCCCCEEEE-EECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCC
Confidence            34556778899999999998 555 5789999999742                                   1267889


Q ss_pred             CEEEEEE---------------------------------CCCeEEEEECCCCeEEEEEc--ccCCcEEEEEEcCCC-EE
Q psy7057          50 NTLLSAS---------------------------------WDMTAKLWCLESQQCKLTIR--QHEMAVWGVIQLANG-II   93 (557)
Q Consensus        50 ~~l~sgs---------------------------------~Dg~i~iwd~~~~~~~~~l~--~h~~~V~~l~~~~~~-~l   93 (557)
                      ++|++++                                 .+..|++||+.+++......  .|...+.+++|+|++ .|
T Consensus       193 ~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l  272 (706)
T 2z3z_A          193 SCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENIL  272 (706)
T ss_dssp             SEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEE
T ss_pred             CEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEE
Confidence            9999998                                 45789999999987654442  467789999999999 78


Q ss_pred             EEEECCC-----eEEEEeCCCc-EEEEEe--CCCC---CEEEEEEeC--CCeEE-EEECCCeEEEEECC-CCeEEEEEeC
Q psy7057          94 VTGCADK-----TIKLHSEEGE-FLKTLT--GHTD---CVRGLAVLN--DTDFV-SCSNDASIRVWDST-TGKCVHTMYG  158 (557)
Q Consensus        94 ~sgs~dg-----~I~vwd~~~~-~~~~l~--~h~~---~V~~l~~~~--~~~lv-s~s~Dg~I~vwd~~-~~~~~~~~~~  158 (557)
                      ++++.++     .|++||.... ....+.  .+..   .+.+++|+|  ++.++ +++.|+.++||.+. +++.+..+..
T Consensus       273 ~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~  352 (706)
T 2z3z_A          273 YVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTK  352 (706)
T ss_dssp             EEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCC
T ss_pred             EEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCC
Confidence            8877775     8999995443 444433  2222   246789999  98854 77788999999876 6777888888


Q ss_pred             CCCcEEE-EEE--cCCEEEEE-eCCC----eEEEEECCCC-ceEeeCCccEEEEEEcCCCc-EEEEEcC----CcEEEEe
Q psy7057         159 HPNFIYS-VAA--HGDLITSG-GEDQ----CVCVYQNKAQ-NSFMIPAMSVWAVAILPNSD-IVTGSSD----GIVRVFS  224 (557)
Q Consensus       159 h~~~V~~-l~~--~~~~l~s~-s~Dg----~I~iwd~~~~-~~~~~~~~~v~~v~~~p~g~-l~sg~~D----g~I~iwd  224 (557)
                      |...+.+ ++|  +++.|+.+ +.++    .|..|+..+. .....+...+.+++|+|+|+ ++..+.+    +.|++|+
T Consensus       353 ~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d  432 (706)
T 2z3z_A          353 GEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKTKDLTPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTN  432 (706)
T ss_dssp             SSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCCCEESCCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEE
T ss_pred             CCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCceeccCCCceEEEEECCCCCEEEEEecCCCCCcEEEEEE
Confidence            8877876 677  66666554 4444    6777776544 22223566799999999998 5554433    5699999


Q ss_pred             cCCCC
Q psy7057         225 ANPDR  229 (557)
Q Consensus       225 ~~~~~  229 (557)
                      +.+++
T Consensus       433 ~~~~~  437 (706)
T 2z3z_A          433 IGKGS  437 (706)
T ss_dssp             SSSCE
T ss_pred             CCCCe
Confidence            98764

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.61  E-value=9.1e-14  Score=142.00  Aligned_cols=213  Identities=11%  Similarity=0.157  Sum_probs=146.7

Q ss_pred             CcccEEEEEEcCCCc-EEEEECC----CcEEEEcCCC--------------------CCCCCCCCEEEEEE-CCCeEEEE
Q psy7057          11 HSMDVRSLSVTPDGC-ILSASRD----KSAKLWKPND--------------------LSPGAKVNTLLSAS-WDMTAKLW   64 (557)
Q Consensus        11 H~~~V~~l~~spdg~-l~sgs~D----g~V~iWd~~~--------------------~~~~~~~~~l~sgs-~Dg~i~iw   64 (557)
                      |...+..++|+|||+ |++++.+    +.|.+|++..                    +++  ++++|++++ .++++.+|
T Consensus        48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~  125 (361)
T 3scy_A           48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVF  125 (361)
T ss_dssp             ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEE
T ss_pred             cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEE
Confidence            667788899999998 7788775    8999997643                    222  567777776 57899999


Q ss_pred             ECCCCeEEE------EEcc--------cCCcEEEEEEcCCC-EEEEEE-CCCeEEEEeCC--C-----c-E------EEE
Q psy7057          65 CLESQQCKL------TIRQ--------HEMAVWGVIQLANG-IIVTGC-ADKTIKLHSEE--G-----E-F------LKT  114 (557)
Q Consensus        65 d~~~~~~~~------~l~~--------h~~~V~~l~~~~~~-~l~sgs-~dg~I~vwd~~--~-----~-~------~~~  114 (557)
                      ++.....+.      ...+        +...+.+++|+|++ .+++++ .++.|.+|+..  +     + .      ...
T Consensus       126 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~  205 (361)
T 3scy_A          126 PIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAF  205 (361)
T ss_dssp             EBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEE
T ss_pred             EeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccce
Confidence            997543221      1111        12346889999999 455444 58899999832  2     1 1      122


Q ss_pred             EeCCCCCEEEEEEeCCCe-EEEEE-CCCeEEEEECCCCeE--EEEEeC---CCCcEEEEEE--cCCEEEEEeC--CCeEE
Q psy7057         115 LTGHTDCVRGLAVLNDTD-FVSCS-NDASIRVWDSTTGKC--VHTMYG---HPNFIYSVAA--HGDLITSGGE--DQCVC  183 (557)
Q Consensus       115 l~~h~~~V~~l~~~~~~~-lvs~s-~Dg~I~vwd~~~~~~--~~~~~~---h~~~V~~l~~--~~~~l~s~s~--Dg~I~  183 (557)
                      ...+...+++++|+|+++ +++++ .++.|.+|++.+++.  +..+..   +.....++++  ++++|+++..  ++.|.
T Consensus       206 ~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~  285 (361)
T 3scy_A          206 KVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVA  285 (361)
T ss_dssp             ECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEE
T ss_pred             ecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEE
Confidence            234556789999999987 44555 689999999987754  333332   3345678888  7787766665  48999


Q ss_pred             EEECC--CC--ce---EeeCCccEEEEEEcCCCc-EEEEE-cCCcEEEEecC
Q psy7057         184 VYQNK--AQ--NS---FMIPAMSVWAVAILPNSD-IVTGS-SDGIVRVFSAN  226 (557)
Q Consensus       184 iwd~~--~~--~~---~~~~~~~v~~v~~~p~g~-l~sg~-~Dg~I~iwd~~  226 (557)
                      +|++.  ..  ..   +.. ...+.+++|+|+|+ |++++ .++.|.+|.++
T Consensus       286 v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d  336 (361)
T 3scy_A          286 IFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERD  336 (361)
T ss_dssp             EEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEEC
T ss_pred             EEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEE
Confidence            99974  22  12   222 34678999999998 66666 67999997765

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=99.61  E-value=1.1e-14  Score=159.08  Aligned_cols=218  Identities=11%  Similarity=0.067  Sum_probs=153.9

Q ss_pred             CCCCCCCCEEEEEEC-CCeEEEEECCCCeEEEEEcccC-CcEEEEEEcCCCEEEEEEC---CCeEEEEe--C--CCcEEE
Q psy7057          43 LSPGAKVNTLLSASW-DMTAKLWCLESQQCKLTIRQHE-MAVWGVIQLANGIIVTGCA---DKTIKLHS--E--EGEFLK  113 (557)
Q Consensus        43 ~~~~~~~~~l~sgs~-Dg~i~iwd~~~~~~~~~l~~h~-~~V~~l~~~~~~~l~sgs~---dg~I~vwd--~--~~~~~~  113 (557)
                      +.++++++.|++++. |++++||++.+++... +..|. ..+.+++|+|+.++++++.   +...++|.  .  .+... 
T Consensus        27 ~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~-lt~~~~~~~~~~~~spd~~l~~~~~~~g~~~~~l~~~~~~~~g~~~-  104 (582)
T 3o4h_A           27 LQGVVDGDKLLVVGFSEGSVNAYLYDGGETVK-LNREPINSVLDPHYGVGRVILVRDVSKGAEQHALFKVNTSRPGEEQ-  104 (582)
T ss_dssp             EEEEETTTEEEEEEEETTEEEEEEEETTEEEE-CCSSCCSEECEECTTCSEEEEEEECSTTSCCEEEEEEETTSTTCCE-
T ss_pred             eecCCCCCeEEEEEccCCceeEEEEcCCCcEe-eecccccccccccCCCCeEEEEeccCCCCcceEEEEEeccCCCccc-
Confidence            345678999999887 9999999997766544 44454 6899999999966666665   45566654  4  55544 


Q ss_pred             EEeCCCCCEEEEEEeCCC--eEEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCC----CeEEEE
Q psy7057         114 TLTGHTDCVRGLAVLNDT--DFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGED----QCVCVY  185 (557)
Q Consensus       114 ~l~~h~~~V~~l~~~~~~--~lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~D----g~I~iw  185 (557)
                      .+..+ ..+...+|+|++  .+++.+.++.+.+||+.++++......+.   .++++  +|+.|++++.+    ..|++|
T Consensus       105 ~l~~~-~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~~~~~~~~~~~i~~~  180 (582)
T 3o4h_A          105 RLEAV-KPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG---FGFVSDIRGDLIAGLGFFGGGRVSLFTS  180 (582)
T ss_dssp             ECTTS-CSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS---CEEEEEEETTEEEEEEEEETTEEEEEEE
T ss_pred             cccCC-CCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC---ceEEECCCCCEEEEEEEcCCCCeEEEEE
Confidence            33322 234466777775  34444445555599999887665554333   45555  89999988877    789999


Q ss_pred             ECCCC--ceEeeCCccEEEEEEcCCCc-EEEEEcCC--cEEEEecCCCCcchhHHHhcccceeEEEe--------ccCCC
Q psy7057         186 QNKAQ--NSFMIPAMSVWAVAILPNSD-IVTGSSDG--IVRVFSANPDRQAEDAVQAQYAEEVKKLK--------SANEQ  252 (557)
Q Consensus       186 d~~~~--~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg--~I~iwd~~~~~~~~~~~~~~~~~~v~~l~--------~~~~~  252 (557)
                      |+.+.  ..+..+...+.+++|+|||+ |+++..++  .|++||+.++...   ....+...+..+.        +.++.
T Consensus       181 d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~spdg  257 (582)
T 3o4h_A          181 NLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE---DLELPSKDFSSYRPTAITWLGYLPDG  257 (582)
T ss_dssp             ETTTCCCEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE---ECCCSCSHHHHHCCSEEEEEEECTTS
T ss_pred             cCCCCCceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE---EccCCCcChhhhhhccccceeEcCCC
Confidence            96554  66777778899999999999 77777788  8999999877654   2222333333333        66666


Q ss_pred             ceeEEEEeCCCcEEEEec
Q psy7057         253 EIGGVKVSDDGIVRVFSA  270 (557)
Q Consensus       253 ~~~~vs~s~DG~IrvW~~  270 (557)
                       ..+++++.||++++|.+
T Consensus       258 -~~~~~~~~~g~~~l~~~  274 (582)
T 3o4h_A          258 -RLAVVARREGRSAVFID  274 (582)
T ss_dssp             -CEEEEEEETTEEEEEET
T ss_pred             -cEEEEEEcCCcEEEEEE
Confidence             66788999999999998

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=99.58  E-value=6.5e-15  Score=164.99  Aligned_cols=248  Identities=9%  Similarity=-0.000  Sum_probs=166.0

Q ss_pred             EEEEcCCCcEEEEECCCcEEEEcCCC-------------------CCCCCCCCEEEEEEC---------CCeEEEEECCC
Q psy7057          17 SLSVTPDGCILSASRDKSAKLWKPND-------------------LSPGAKVNTLLSASW---------DMTAKLWCLES   68 (557)
Q Consensus        17 ~l~~spdg~l~sgs~Dg~V~iWd~~~-------------------~~~~~~~~~l~sgs~---------Dg~i~iwd~~~   68 (557)
                      +++|+|+|+++..+.|++|++||+.+                   ++++|++++|++++.         +++|++||+.+
T Consensus        20 ~~~~s~dg~~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~   99 (719)
T 1z68_A           20 FPNWISGQEYLHQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSN   99 (719)
T ss_dssp             CCEESSSSEEEEECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTT
T ss_pred             ccEECCCCeEEEEcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCC
Confidence            78999999977777899999999865                   457889999999887         78999999999


Q ss_pred             CeEE--EEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcEEEEE--eCCCCCE-----------------EEEE
Q psy7057          69 QQCK--LTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFLKTL--TGHTDCV-----------------RGLA  126 (557)
Q Consensus        69 ~~~~--~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~~~l--~~h~~~V-----------------~~l~  126 (557)
                      ++.+  ..+   ...+.+++|+|+| .|+.++ ++.|++|+..+.....+  .++...|                 .+++
T Consensus       100 g~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~  175 (719)
T 1z68_A          100 GEFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALW  175 (719)
T ss_dssp             TEECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEE
T ss_pred             Cccccceec---CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEE
Confidence            8762  122   3568889999999 677664 78999999543322332  2333322                 4899


Q ss_pred             EeCCCe-EEEEECCC----------------------------------eEEEEECCCCeEE---E-----EEeCCCCcE
Q psy7057         127 VLNDTD-FVSCSNDA----------------------------------SIRVWDSTTGKCV---H-----TMYGHPNFI  163 (557)
Q Consensus       127 ~~~~~~-lvs~s~Dg----------------------------------~I~vwd~~~~~~~---~-----~~~~h~~~V  163 (557)
                      |+|+|+ |++++.|.                                  .|++||+.+++..   .     .+.+|...+
T Consensus       176 wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~  255 (719)
T 1z68_A          176 WSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYF  255 (719)
T ss_dssp             ECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEE
T ss_pred             ECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceE
Confidence            999987 66666542                                  7899999887642   1     133588889


Q ss_pred             EEEEE--cCCEEEEEeCC----CeEEEEE----CCCC---ceE----eeCCccEE-----EEEEcCCCc-EEE--EEcCC
Q psy7057         164 YSVAA--HGDLITSGGED----QCVCVYQ----NKAQ---NSF----MIPAMSVW-----AVAILPNSD-IVT--GSSDG  218 (557)
Q Consensus       164 ~~l~~--~~~~l~s~s~D----g~I~iwd----~~~~---~~~----~~~~~~v~-----~v~~~p~g~-l~s--g~~Dg  218 (557)
                      .+++|  +++++++....    ..|.+||    ..+.   ..+    ..+...+.     .++|+|+|+ ++.  +..+|
T Consensus       256 ~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g  335 (719)
T 1z68_A          256 SWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDG  335 (719)
T ss_dssp             EEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTS
T ss_pred             EEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCC
Confidence            99999  65556554332    2488899    6544   222    24555565     789999998 443  44556


Q ss_pred             c--EEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeC----CCcEEEEecCC
Q psy7057         219 I--VRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSD----DGIVRVFSANP  272 (557)
Q Consensus       219 ~--I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~----DG~IrvW~~~~  272 (557)
                      .  |.+|++.++....   +......+..+.+. .....+++++.    ++.+++|.++.
T Consensus       336 ~~~l~~~~~~~~~~~~---lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~  391 (719)
T 1z68_A          336 YKHIHYIKDTVENAIQ---ITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISI  391 (719)
T ss_dssp             CEEEEEESSCSTTCEE---CSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEEC
T ss_pred             ceEEEEEECCCCceEe---cccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeC
Confidence            4  6666665544221   11222334444444 44444445544    58899998764

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.57  E-value=1.7e-13  Score=138.20  Aligned_cols=220  Identities=10%  Similarity=0.035  Sum_probs=152.3

Q ss_pred             CCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccC-CcEEEEEEcCCC-E-EEEEECCCeEEEEeC-CCcEEEEEeCCC
Q psy7057          44 SPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHE-MAVWGVIQLANG-I-IVTGCADKTIKLHSE-EGEFLKTLTGHT  119 (557)
Q Consensus        44 ~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~-~~V~~l~~~~~~-~-l~sgs~dg~I~vwd~-~~~~~~~l~~h~  119 (557)
                      ++.+.+..+++++.+++|++||+.+++.+..+..+. ..+..++|+|++ . ++++..++.|.+||. +++.+..+..+.
T Consensus         6 ~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~   85 (349)
T 1jmx_B            6 ALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSS   85 (349)
T ss_dssp             CCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCC
T ss_pred             cccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEccc
Confidence            455677889999999999999999999888876543 256789999998 4 455667899999995 466666665332


Q ss_pred             ------CCEEEEEEeCCCe-EEEEECC------------CeEEEEECCCCe---EEEEEeCCCCcEEEEEE--cCCEEEE
Q psy7057         120 ------DCVRGLAVLNDTD-FVSCSND------------ASIRVWDSTTGK---CVHTMYGHPNFIYSVAA--HGDLITS  175 (557)
Q Consensus       120 ------~~V~~l~~~~~~~-lvs~s~D------------g~I~vwd~~~~~---~~~~~~~h~~~V~~l~~--~~~~l~s  175 (557)
                            ..+.+++++|+++ +++++.+            +.|.+||+.+++   .+..+. +...+.++++  +++ +++
T Consensus        86 ~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~-l~~  163 (349)
T 1jmx_B           86 VPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS-LYV  163 (349)
T ss_dssp             STTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-EEE
T ss_pred             ccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCc-EEE
Confidence                  2378899999986 5566644            899999998743   334444 3446778888  677 555


Q ss_pred             EeCCCeEEEEECCCCc---eEeeCC-------------------------------------------------------
Q psy7057         176 GGEDQCVCVYQNKAQN---SFMIPA-------------------------------------------------------  197 (557)
Q Consensus       176 ~s~Dg~I~iwd~~~~~---~~~~~~-------------------------------------------------------  197 (557)
                      ++.  .|++||..+.+   .+....                                                       
T Consensus       164 ~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~  241 (349)
T 1jmx_B          164 AGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLK  241 (349)
T ss_dssp             ESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETT
T ss_pred             ccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEecc
Confidence            544  49999976542   221111                                                       


Q ss_pred             -------------ccEEEEEEcC-CCc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCC
Q psy7057         198 -------------MSVWAVAILP-NSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDD  262 (557)
Q Consensus       198 -------------~~v~~v~~~p-~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~D  262 (557)
                                   ..+.+++++| +++ ++++  ++.|++||+.+.+......   ....+..+.+.+.... +++++.+
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~---~~~~~~~~~~s~dg~~-l~~~~~~  315 (349)
T 1jmx_B          242 TGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAAN---LDHTYYCVAFDKKGDK-LYLGGTF  315 (349)
T ss_dssp             TCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEE---CSSCCCEEEECSSSSC-EEEESBS
T ss_pred             CCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEc---CCCCccceEECCCCCE-EEEecCC
Confidence                         1345677789 888 4445  8899999998776543221   1223455666666554 4457888


Q ss_pred             CcEEEEecCCC
Q psy7057         263 GIVRVFSANPD  273 (557)
Q Consensus       263 G~IrvW~~~~~  273 (557)
                      +.|++|+..+.
T Consensus       316 ~~v~v~d~~~~  326 (349)
T 1jmx_B          316 NDLAVFNPDTL  326 (349)
T ss_dssp             SEEEEEETTTT
T ss_pred             CeEEEEecccc
Confidence            99999998754

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=99.57  E-value=1.8e-12  Score=131.14  Aligned_cols=216  Identities=13%  Similarity=0.118  Sum_probs=162.4

Q ss_pred             cccEEEEEEcCCCcEE-EEECC------------------------CcEEEEcCCC-----------------CCCCCCC
Q psy7057          12 SMDVRSLSVTPDGCIL-SASRD------------------------KSAKLWKPND-----------------LSPGAKV   49 (557)
Q Consensus        12 ~~~V~~l~~spdg~l~-sgs~D------------------------g~V~iWd~~~-----------------~~~~~~~   49 (557)
                      -+.|.+|+++|+|+++ +.+.+                        ++|.+||..+                 +++++++
T Consensus        23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g  102 (329)
T 3fvz_A           23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG  102 (329)
T ss_dssp             CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred             cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence            3679999999999955 44445                        3799999864                 5667788


Q ss_pred             CEEEEEECCCeEEEEECCCCe-EEEEE---------cccCCcEEEEEEcC-CC-EEEEEE-CCCeEEEEeCCCcEEEEEe
Q psy7057          50 NTLLSASWDMTAKLWCLESQQ-CKLTI---------RQHEMAVWGVIQLA-NG-IIVTGC-ADKTIKLHSEEGEFLKTLT  116 (557)
Q Consensus        50 ~~l~sgs~Dg~i~iwd~~~~~-~~~~l---------~~h~~~V~~l~~~~-~~-~l~sgs-~dg~I~vwd~~~~~~~~l~  116 (557)
                      +++++.+.++.|++|+..... .+..+         ..+-..+..++++| ++ ++++.+ .++.|++|+.++..+..+.
T Consensus       103 ~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~~~~~~~  182 (329)
T 3fvz_A          103 NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGKFVTQWG  182 (329)
T ss_dssp             CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTSCEEEEEC
T ss_pred             CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCCEEEEec
Confidence            988888889999999976542 45555         34555789999999 67 666665 5899999998888887774


Q ss_pred             CCC----------CCEEEEEEeCC-CeE-EEEECCCeEEEEECCCCeEEEEEe--CCCCcEEEEEEcCCEEEEE------
Q psy7057         117 GHT----------DCVRGLAVLND-TDF-VSCSNDASIRVWDSTTGKCVHTMY--GHPNFIYSVAAHGDLITSG------  176 (557)
Q Consensus       117 ~h~----------~~V~~l~~~~~-~~l-vs~s~Dg~I~vwd~~~~~~~~~~~--~h~~~V~~l~~~~~~l~s~------  176 (557)
                      ...          .....|+++|+ +.+ ++...++.|++||..+++.+.++.  .+...++++++.+..++..      
T Consensus       183 ~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v  262 (329)
T 3fvz_A          183 EESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYF  262 (329)
T ss_dssp             EECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCT
T ss_pred             cCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEe
Confidence            322          34899999998 774 466788999999998899988884  3556778887754433332      


Q ss_pred             --eCCCeEEEEECCCCceEe------eCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCC
Q psy7057         177 --GEDQCVCVYQNKAQNSFM------IPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANP  227 (557)
Q Consensus       177 --s~Dg~I~iwd~~~~~~~~------~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~  227 (557)
                        +.+..|++|+..+...+.      .+...+..++++|+|. +++...+++|++|++..
T Consensus       263 ~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~  322 (329)
T 3fvz_A          263 GDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE  322 (329)
T ss_dssp             TCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred             ccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence              234589999976663322      3445689999999998 66777899999999864

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=99.56  E-value=1.6e-14  Score=161.82  Aligned_cols=267  Identities=9%  Similarity=0.042  Sum_probs=172.8

Q ss_pred             EEeccCcc---cEEEEEEcCCCc-EEEEEC---------CCcEEEEcCCC---------------CCCCCCCCEEEEEEC
Q psy7057           6 TALYGHSM---DVRSLSVTPDGC-ILSASR---------DKSAKLWKPND---------------LSPGAKVNTLLSASW   57 (557)
Q Consensus         6 ~~l~gH~~---~V~~l~~spdg~-l~sgs~---------Dg~V~iWd~~~---------------~~~~~~~~~l~sgs~   57 (557)
                      ..+.+|..   .|.+++|||||+ |++++.         +++|++||+.+               ++++|+++.|+.++ 
T Consensus        50 ~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~~~~~~~~~SPDG~~la~~~-  128 (719)
T 1z68_A           50 TILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELPRPIQYLCWSPVGSKLAYVY-  128 (719)
T ss_dssp             EEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCSSBCCEEECSSTTCEEEEE-
T ss_pred             EEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceecCcccccceECCCCCEEEEEE-
Confidence            34444443   389999999998 777765         78999999754               46788999999886 


Q ss_pred             CCeEEEEECCCCeEEEEE-cccCCcE-----------------EEEEEcCCC-EEEEEECCC------------------
Q psy7057          58 DMTAKLWCLESQQCKLTI-RQHEMAV-----------------WGVIQLANG-IIVTGCADK------------------  100 (557)
Q Consensus        58 Dg~i~iwd~~~~~~~~~l-~~h~~~V-----------------~~l~~~~~~-~l~sgs~dg------------------  100 (557)
                      +++|++|++.+++..... .++...|                 .+++|+|+| .|++++.|.                  
T Consensus       129 ~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~  208 (719)
T 1z68_A          129 QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPR  208 (719)
T ss_dssp             TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCE
T ss_pred             CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCcc
Confidence            789999999888765432 3333333                 489999999 788877552                  


Q ss_pred             ----------------eEEEEeCCCcEE----E-----EEeCCCCCEEEEEEeCCCeEE-EEECC----CeEEEEE----
Q psy7057         101 ----------------TIKLHSEEGEFL----K-----TLTGHTDCVRGLAVLNDTDFV-SCSND----ASIRVWD----  146 (557)
Q Consensus       101 ----------------~I~vwd~~~~~~----~-----~l~~h~~~V~~l~~~~~~~lv-s~s~D----g~I~vwd----  146 (557)
                                      .|++||..+...    .     .+.+|...+.+++|+|+++++ +....    ..|.+||    
T Consensus       209 ~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~  288 (719)
T 1z68_A          209 TINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFRED  288 (719)
T ss_dssp             EEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSS
T ss_pred             ceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCC
Confidence                            788999655432    1     133688889999999998865 33222    2488899    


Q ss_pred             CCCCeEEEEE----eCCCCcEE-----EEEE--cCCEEE--EEeCCC--eEEEEECCCC--ceEeeCCccEEEEEEcCCC
Q psy7057         147 STTGKCVHTM----YGHPNFIY-----SVAA--HGDLIT--SGGEDQ--CVCVYQNKAQ--NSFMIPAMSVWAVAILPNS  209 (557)
Q Consensus       147 ~~~~~~~~~~----~~h~~~V~-----~l~~--~~~~l~--s~s~Dg--~I~iwd~~~~--~~~~~~~~~v~~v~~~p~g  209 (557)
                      +.++++...+    .+|...+.     .+.|  +|+.|+  ++..++  .|.+|++...  ..+..+...+..+.++ ++
T Consensus       289 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~~~~lt~~~~~v~~~~~~-d~  367 (719)
T 1z68_A          289 WQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVENAIQITSGKWEAINIFRV-TQ  367 (719)
T ss_dssp             SSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTTCEECSCSSSCEEEEEEE-CS
T ss_pred             CCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCceEecccCceEEEEEEEE-eC
Confidence            8777765444    46666665     6677  676443  444555  4666675544  4444445567777777 66


Q ss_pred             c-EEEEEcC-----CcEEEEecCC--CC--cchhH-HHhcccceeEEEeccCCCceeEEEEeCC--CcEEEEecCCCh
Q psy7057         210 D-IVTGSSD-----GIVRVFSANP--DR--QAEDA-VQAQYAEEVKKLKSANEQEIGGVKVSDD--GIVRVFSANPDR  274 (557)
Q Consensus       210 ~-l~sg~~D-----g~I~iwd~~~--~~--~~~~~-~~~~~~~~v~~l~~~~~~~~~~vs~s~D--G~IrvW~~~~~~  274 (557)
                      + ++..+.+     +.+++|.+..  +.  ..... ....+...+..+.+.++.....++++.+  ..+.+|++..++
T Consensus       368 ~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d~~~g~  445 (719)
T 1z68_A          368 DSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHDGRTDQ  445 (719)
T ss_dssp             SEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSCEEEEECSSSCC
T ss_pred             CEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCCeEEEEECCCCC
Confidence            6 6555544     8899998764  21  11110 0111223344555555555545555554  468888876554

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=99.56  E-value=1.1e-13  Score=142.31  Aligned_cols=265  Identities=9%  Similarity=-0.033  Sum_probs=174.4

Q ss_pred             EEEeccCcccEEE-----EEEcCCCc-EEEEEC-CCc--EEEEcCCC----------------CCCCCCCCEEEEEECCC
Q psy7057           5 STALYGHSMDVRS-----LSVTPDGC-ILSASR-DKS--AKLWKPND----------------LSPGAKVNTLLSASWDM   59 (557)
Q Consensus         5 ~~~l~gH~~~V~~-----l~~spdg~-l~sgs~-Dg~--V~iWd~~~----------------~~~~~~~~~l~sgs~Dg   59 (557)
                      ...|..|...+..     .+|+|||+ |+.++. ++.  |.+||+.+                ..++|+++.|+.++.++
T Consensus        23 ~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~  102 (388)
T 3pe7_A           23 VTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGR  102 (388)
T ss_dssp             EEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTT
T ss_pred             eEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCC
Confidence            4567778777766     88999998 777776 674  77788765                36788999999999999


Q ss_pred             eEEEEECCCCeEEEEEcccCCcEEEEE--EcCCC-EEEEE----------------------ECCCeEEEEeCCCcEEEE
Q psy7057          60 TAKLWCLESQQCKLTIRQHEMAVWGVI--QLANG-IIVTG----------------------CADKTIKLHSEEGEFLKT  114 (557)
Q Consensus        60 ~i~iwd~~~~~~~~~l~~h~~~V~~l~--~~~~~-~l~sg----------------------s~dg~I~vwd~~~~~~~~  114 (557)
                      .|++||+.+++....+..+...+....  +++++ .++..                      ..+..|.+||........
T Consensus       103 ~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~  182 (388)
T 3pe7_A          103 NLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTV  182 (388)
T ss_dssp             EEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEE
T ss_pred             eEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEE
Confidence            999999999987777766666554443  47888 44422                      244679999965555566


Q ss_pred             EeCCCCCEEEEEEeC-CCe-EEEEECC------CeEEEEECCCCeEEEEEeCCC--CcEEEEEE--cCCEEEEEe-CCC-
Q psy7057         115 LTGHTDCVRGLAVLN-DTD-FVSCSND------ASIRVWDSTTGKCVHTMYGHP--NFIYSVAA--HGDLITSGG-EDQ-  180 (557)
Q Consensus       115 l~~h~~~V~~l~~~~-~~~-lvs~s~D------g~I~vwd~~~~~~~~~~~~h~--~~V~~l~~--~~~~l~s~s-~Dg-  180 (557)
                      +..+...+..+.|+| ++. ++.++.+      ..|.++|+..++. ..+..+.  ..+..+.|  +|+.|+..+ .++ 
T Consensus       183 l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~  261 (388)
T 3pe7_A          183 ILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAEGESCTHEFWVPDGSALVYVSYLKGS  261 (388)
T ss_dssp             EEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCTTEEEEEEEECTTSSCEEEEEEETTC
T ss_pred             eecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCCCcccccceECCCCCEEEEEecCCCC
Confidence            666777899999999 877 5555543      3788888765543 3444444  35777778  677564433 222 


Q ss_pred             ---eEEEEECCCCc--eEeeCCcc------EEEEEEcCCCc-EEEE---------EcCCcEEEEecCCCCcchhHHHhcc
Q psy7057         181 ---CVCVYQNKAQN--SFMIPAMS------VWAVAILPNSD-IVTG---------SSDGIVRVFSANPDRQAEDAVQAQY  239 (557)
Q Consensus       181 ---~I~iwd~~~~~--~~~~~~~~------v~~v~~~p~g~-l~sg---------~~Dg~I~iwd~~~~~~~~~~~~~~~  239 (557)
                         .|++||+.+..  .+......      ...++|+|+|+ ++..         ..+..|++|++.+++.....   .+
T Consensus       262 ~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~---~~  338 (388)
T 3pe7_A          262 PDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRVA---RH  338 (388)
T ss_dssp             CCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEEEEEE---EC
T ss_pred             CcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCceEEec---cc
Confidence               39999987652  33221110      11236899998 4432         45678999999876543221   11


Q ss_pred             cc-----------eeEEEeccCCCceeEEEEeCCCcEEEEecCCC
Q psy7057         240 AE-----------EVKKLKSANEQEIGGVKVSDDGIVRVFSANPD  273 (557)
Q Consensus       240 ~~-----------~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~  273 (557)
                      ..           .+..+.+.++....+++...+|...||.++-.
T Consensus       339 ~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l~  383 (388)
T 3pe7_A          339 DTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATLP  383 (388)
T ss_dssp             CCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECC
T ss_pred             cCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEECC
Confidence            11           23445566666655566667888888876543

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=99.55  E-value=1.3e-12  Score=134.02  Aligned_cols=217  Identities=11%  Similarity=0.167  Sum_probs=151.7

Q ss_pred             CcccEEEEEEcCCCc-EEEEECCCcEEEEcCC-C-----------------CCCCCCCCE--EEEEE-------------
Q psy7057          11 HSMDVRSLSVTPDGC-ILSASRDKSAKLWKPN-D-----------------LSPGAKVNT--LLSAS-------------   56 (557)
Q Consensus        11 H~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~-~-----------------~~~~~~~~~--l~sgs-------------   56 (557)
                      +...+..++|+|+|+ |++++.+ .|.+|++. +                 +.+++++++  +++++             
T Consensus        38 ~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~  116 (365)
T 1jof_A           38 QDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYK  116 (365)
T ss_dssp             TTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESS
T ss_pred             CCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeec
Confidence            344678899999998 7788877 99999975 3                 456777884  44553             


Q ss_pred             CCCeEEEEECC-CCeEEEEEc----ccCCcEEEEEEcCCC-EEEEEE-CCCeEEEEeC--CCcEE--EEEe--CCCCCEE
Q psy7057          57 WDMTAKLWCLE-SQQCKLTIR----QHEMAVWGVIQLANG-IIVTGC-ADKTIKLHSE--EGEFL--KTLT--GHTDCVR  123 (557)
Q Consensus        57 ~Dg~i~iwd~~-~~~~~~~l~----~h~~~V~~l~~~~~~-~l~sgs-~dg~I~vwd~--~~~~~--~~l~--~h~~~V~  123 (557)
                      .++++.+|++. +++....+.    .+...+.+++|+|+| .++++. .++.|++|+.  +++..  ..+.  .|...++
T Consensus       117 ~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~  196 (365)
T 1jof_A          117 FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPR  196 (365)
T ss_dssp             SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEE
T ss_pred             CCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCC
Confidence            68999999997 465544443    256789999999999 666655 4689999995  45542  2333  2467799


Q ss_pred             EEEEeCCCe-EEEEE-CCCeEEEEECC--CCeEE---EEEeC-------CCC------cEEEEE-E--cCCEEEEEeCC-
Q psy7057         124 GLAVLNDTD-FVSCS-NDASIRVWDST--TGKCV---HTMYG-------HPN------FIYSVA-A--HGDLITSGGED-  179 (557)
Q Consensus       124 ~l~~~~~~~-lvs~s-~Dg~I~vwd~~--~~~~~---~~~~~-------h~~------~V~~l~-~--~~~~l~s~s~D-  179 (557)
                      .++|+|+++ +++++ .+++|.+|++.  +++..   ..+..       |..      .+..++ +  ++++|++++.+ 
T Consensus       197 ~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~  276 (365)
T 1jof_A          197 WVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRAN  276 (365)
T ss_dssp             EEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEES
T ss_pred             EeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCC
Confidence            999999986 44555 47899999764  56543   22321       222      578888 7  77777766543 


Q ss_pred             C-----eEEEEECC-CC--ce----EeeCCccEEEEEEcC---CCc-EEEEEc-CCcEEEEecCCC
Q psy7057         180 Q-----CVCVYQNK-AQ--NS----FMIPAMSVWAVAILP---NSD-IVTGSS-DGIVRVFSANPD  228 (557)
Q Consensus       180 g-----~I~iwd~~-~~--~~----~~~~~~~v~~v~~~p---~g~-l~sg~~-Dg~I~iwd~~~~  228 (557)
                      .     +|.+|++. ..  ..    +..+...+..++|+|   +|+ +++++. ++.|++|+++..
T Consensus       277 ~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~  342 (365)
T 1jof_A          277 KFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE  342 (365)
T ss_dssp             STTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred             CCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence            2     89999974 33  21    222444567889999   788 667765 489999998764

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.53  E-value=2.1e-12  Score=131.73  Aligned_cols=228  Identities=10%  Similarity=0.085  Sum_probs=147.8

Q ss_pred             CCCCCCCCEEEEEECC----CeEEEEECCC--Ce--EEEEEcccCCcEEEEEEcCCCEEEEEE-CCCeEEEEeCC--CcE
Q psy7057          43 LSPGAKVNTLLSASWD----MTAKLWCLES--QQ--CKLTIRQHEMAVWGVIQLANGIIVTGC-ADKTIKLHSEE--GEF  111 (557)
Q Consensus        43 ~~~~~~~~~l~sgs~D----g~i~iwd~~~--~~--~~~~l~~h~~~V~~l~~~~~~~l~sgs-~dg~I~vwd~~--~~~  111 (557)
                      +++++++++|++++.+    +.|.+|++..  ++  .+.....+...+..+++ ....+++++ .++.|.+|+..  +..
T Consensus        55 l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~-dg~~l~~~~~~~~~v~~~~~~~~g~~  133 (361)
T 3scy_A           55 LIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT-NGKNIVTANYSGGSITVFPIGQDGAL  133 (361)
T ss_dssp             EEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE-CSSEEEEEETTTTEEEEEEBCTTSCB
T ss_pred             EEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE-CCCEEEEEECCCCEEEEEEeCCCCcC
Confidence            5778889999999986    7999998765  43  33444445667788888 333555555 68899999943  211


Q ss_pred             ---EEE--EeC--------CCCCEEEEEEeCCCe-EE-EEECCCeEEEEECCCCe-------E------EEEEeCCCCcE
Q psy7057         112 ---LKT--LTG--------HTDCVRGLAVLNDTD-FV-SCSNDASIRVWDSTTGK-------C------VHTMYGHPNFI  163 (557)
Q Consensus       112 ---~~~--l~~--------h~~~V~~l~~~~~~~-lv-s~s~Dg~I~vwd~~~~~-------~------~~~~~~h~~~V  163 (557)
                         ...  ..+        +...+.+++|+|+++ ++ ++..++.|++|++....       .      ......+...+
T Consensus       134 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  213 (361)
T 3scy_A          134 LPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGP  213 (361)
T ss_dssp             CSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCE
T ss_pred             cccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCC
Confidence               111  111        123468899999987 44 44458899999876432       1      11222345667


Q ss_pred             EEEEE--cCCEEEEEe-CCCeEEEEECCCC--c---eEee---CCccEEEEEEcCCCc-EEEEEc--CCcEEEEecCC--
Q psy7057         164 YSVAA--HGDLITSGG-EDQCVCVYQNKAQ--N---SFMI---PAMSVWAVAILPNSD-IVTGSS--DGIVRVFSANP--  227 (557)
Q Consensus       164 ~~l~~--~~~~l~s~s-~Dg~I~iwd~~~~--~---~~~~---~~~~v~~v~~~p~g~-l~sg~~--Dg~I~iwd~~~--  227 (557)
                      ..++|  +++++++++ .++.|.+|++...  .   .+..   +......++|+|+|+ ++++..  ++.|++|+++.  
T Consensus       214 ~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~  293 (361)
T 3scy_A          214 RHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETN  293 (361)
T ss_dssp             EEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTT
T ss_pred             eEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCC
Confidence            88888  677777666 6899999997643  1   1211   223468999999999 555554  48999999962  


Q ss_pred             CCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCC
Q psy7057         228 DRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANP  272 (557)
Q Consensus       228 ~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~  272 (557)
                      +.......... ...+..+.+.++.....++...++.|++|.++.
T Consensus       294 g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~  337 (361)
T 3scy_A          294 GTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQ  337 (361)
T ss_dssp             CCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECT
T ss_pred             CcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEEC
Confidence            33211111111 234556777777665555556889999987764

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=99.49  E-value=1.1e-11  Score=122.12  Aligned_cols=226  Identities=14%  Similarity=0.191  Sum_probs=156.6

Q ss_pred             CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcc------cCCcEEEEEE-cCCCEEEEEEC--CCeEEEEeCCCcEEE
Q psy7057          43 LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQ------HEMAVWGVIQ-LANGIIVTGCA--DKTIKLHSEEGEFLK  113 (557)
Q Consensus        43 ~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~------h~~~V~~l~~-~~~~~l~sgs~--dg~I~vwd~~~~~~~  113 (557)
                      +.+++++.++++.+.++.|.+|+.. ++.+..+..      |...+.++++ .+++.++.+..  ++.|++|+.+++.+.
T Consensus        35 v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~g~~~~  113 (286)
T 1q7f_A           35 VAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQFVR  113 (286)
T ss_dssp             EEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTTSCEEE
T ss_pred             EEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEECCCCcEEE
Confidence            4455678888888889999999987 566666642      4467899999 46775555553  899999998888877


Q ss_pred             EEe-CCCCCEEEEEEeCCCeEE-EEECCCeEEEEECCCCeEEEEEe--CCCCcEEEEEE--cCCEEEEEeCCCeEEEEEC
Q psy7057         114 TLT-GHTDCVRGLAVLNDTDFV-SCSNDASIRVWDSTTGKCVHTMY--GHPNFIYSVAA--HGDLITSGGEDQCVCVYQN  187 (557)
Q Consensus       114 ~l~-~h~~~V~~l~~~~~~~lv-s~s~Dg~I~vwd~~~~~~~~~~~--~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~  187 (557)
                      .+. .+...+.++++++++.++ +.+.++.|.+||. .++.+..+.  .+...+.++++  +++++++.+.++.|++|+.
T Consensus       114 ~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~  192 (286)
T 1q7f_A          114 KFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQ-NGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY  192 (286)
T ss_dssp             EECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECT-TSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEET
T ss_pred             EecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcC-CCCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcC
Confidence            764 344678999999998855 5556789999995 566666664  34567889999  4566677777899999997


Q ss_pred             CCC--ceEeeC--CccEEEEEEcCCCcEE-EEEcCC-cEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeC
Q psy7057         188 KAQ--NSFMIP--AMSVWAVAILPNSDIV-TGSSDG-IVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSD  261 (557)
Q Consensus       188 ~~~--~~~~~~--~~~v~~v~~~p~g~l~-sg~~Dg-~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~  261 (557)
                      ...  ..+...  ...+..++++++|.++ +...++ .|++|+..... ...............+.+.+... .+++ +.
T Consensus       193 ~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~~-~~~~~~~~~~~~~~~i~~~~~g~-l~vs-~~  269 (286)
T 1q7f_A          193 EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQL-ISALESKVKHAQCFDVALMDDGS-VVLA-SK  269 (286)
T ss_dssp             TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSCE-EEEEEESSCCSCEEEEEEETTTE-EEEE-ET
T ss_pred             CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCCE-EEEEcccCCCCcceeEEECCCCc-EEEE-CC
Confidence            543  233222  2468999999999944 554565 99999965432 21111111112244566655543 4455 67


Q ss_pred             CCcEEEEecCCC
Q psy7057         262 DGIVRVFSANPD  273 (557)
Q Consensus       262 DG~IrvW~~~~~  273 (557)
                      |+.|++|++...
T Consensus       270 ~~~v~v~~~~~~  281 (286)
T 1q7f_A          270 DYRLYIYRYVQL  281 (286)
T ss_dssp             TTEEEEEECSCC
T ss_pred             CCeEEEEEcccc
Confidence            999999997653

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=99.49  E-value=1.8e-12  Score=133.02  Aligned_cols=230  Identities=9%  Similarity=0.047  Sum_probs=147.7

Q ss_pred             CCCCCCCCEEEEEECCCeEEEEECC-CCeEEEEEccc-CCcEEEEEEcCCCE--E-EEEE-------------CCCeEEE
Q psy7057          43 LSPGAKVNTLLSASWDMTAKLWCLE-SQQCKLTIRQH-EMAVWGVIQLANGI--I-VTGC-------------ADKTIKL  104 (557)
Q Consensus        43 ~~~~~~~~~l~sgs~Dg~i~iwd~~-~~~~~~~l~~h-~~~V~~l~~~~~~~--l-~sgs-------------~dg~I~v  104 (557)
                      +++++++++|++++.+ .|.+|++. +++........ ...+.+++++|++.  + ++++             .++++.+
T Consensus        45 ~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v  123 (365)
T 1jof_A           45 MTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNV  123 (365)
T ss_dssp             EEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEE
T ss_pred             EEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEE
Confidence            5677889999999988 99999997 77765433211 12355688999984  3 3442             6899999


Q ss_pred             EeC--CCcEEEEEe----CCCCCEEEEEEeCCCe-EEEEE-CCCeEEEEECC-CCeEE--EEEe--CCCCcEEEEEE--c
Q psy7057         105 HSE--EGEFLKTLT----GHTDCVRGLAVLNDTD-FVSCS-NDASIRVWDST-TGKCV--HTMY--GHPNFIYSVAA--H  169 (557)
Q Consensus       105 wd~--~~~~~~~l~----~h~~~V~~l~~~~~~~-lvs~s-~Dg~I~vwd~~-~~~~~--~~~~--~h~~~V~~l~~--~  169 (557)
                      |+.  +++....+.    .+...+.+++|+|+++ ++++. .++.|++|++. +++..  ..+.  .|...++.++|  +
T Consensus       124 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spd  203 (365)
T 1jof_A          124 FSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPT  203 (365)
T ss_dssp             EEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTT
T ss_pred             EccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCC
Confidence            994  455544443    2566799999999987 44544 46899999998 67653  3343  24567889998  6


Q ss_pred             CCEEEEEeC-CCeEEEEECC--CCc------eEeeC-------Cc------cEEEEE-EcCCCc-EEEEEc-CC-----c
Q psy7057         170 GDLITSGGE-DQCVCVYQNK--AQN------SFMIP-------AM------SVWAVA-ILPNSD-IVTGSS-DG-----I  219 (557)
Q Consensus       170 ~~~l~s~s~-Dg~I~iwd~~--~~~------~~~~~-------~~------~v~~v~-~~p~g~-l~sg~~-Dg-----~  219 (557)
                      ++++++++. ++.|.+|+..  +..      .+...       ..      .+..++ |+|+|+ ++++.. ++     +
T Consensus       204 g~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~  283 (365)
T 1jof_A          204 GNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGY  283 (365)
T ss_dssp             SSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCE
T ss_pred             CCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCe
Confidence            778877764 7899999743  221      12211       11      488999 999998 555543 23     8


Q ss_pred             EEEEecC-CCCcchhHH-HhcccceeEEEeccCC--CceeEEEEe-CCCcEEEEecCCC
Q psy7057         220 VRVFSAN-PDRQAEDAV-QAQYAEEVKKLKSANE--QEIGGVKVS-DDGIVRVFSANPD  273 (557)
Q Consensus       220 I~iwd~~-~~~~~~~~~-~~~~~~~v~~l~~~~~--~~~~~vs~s-~DG~IrvW~~~~~  273 (557)
                      |++|+++ +++...... ..........+.+.+.  +...+++++ .++.|+||+++.+
T Consensus       284 i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~  342 (365)
T 1jof_A          284 IAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE  342 (365)
T ss_dssp             EEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred             EEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence            9999986 333221100 1111112233444442  233455555 4599999998753

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=99.47  E-value=8.5e-13  Score=146.17  Aligned_cols=260  Identities=12%  Similarity=0.047  Sum_probs=172.7

Q ss_pred             eccCcccEEEEEEcCCCc-EEEE--ECCCcEEEEcCCC--------------C---------CC----CCCCCE-EEEEE
Q psy7057           8 LYGHSMDVRSLSVTPDGC-ILSA--SRDKSAKLWKPND--------------L---------SP----GAKVNT-LLSAS   56 (557)
Q Consensus         8 l~gH~~~V~~l~~spdg~-l~sg--s~Dg~V~iWd~~~--------------~---------~~----~~~~~~-l~sgs   56 (557)
                      +.+|...|..++|++++. +++.  +.++...||....              .         .+    +|+++. |+.++
T Consensus        19 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~   98 (662)
T 3azo_A           19 VASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTH   98 (662)
T ss_dssp             HHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEB
T ss_pred             HhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEE
Confidence            567999999999998866 4455  4578899997422              1         22    377887 66554


Q ss_pred             C-CCeEEEEECC--CCeEEEEEcc-----cCCcEEEEEEcCCC-EEEEEECC----------CeEEEEeCCC------cE
Q psy7057          57 W-DMTAKLWCLE--SQQCKLTIRQ-----HEMAVWGVIQLANG-IIVTGCAD----------KTIKLHSEEG------EF  111 (557)
Q Consensus        57 ~-Dg~i~iwd~~--~~~~~~~l~~-----h~~~V~~l~~~~~~-~l~sgs~d----------g~I~vwd~~~------~~  111 (557)
                      . +..|.++++.  .......+..     |...+.+++|+|+| .|++++.+          ..|++||..+      ..
T Consensus        99 ~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  178 (662)
T 3azo_A           99 FGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSA  178 (662)
T ss_dssp             TTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGG
T ss_pred             CCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCc
Confidence            3 5566677765  2033445555     67788999999999 78887776          5899999766      55


Q ss_pred             EEEEe-CCCCCEEEEEEeCCCe-EEEEECC--------CeEEEEECC-CC---eEEEEEeCCCCcEEEEEE--cCCEEEE
Q psy7057         112 LKTLT-GHTDCVRGLAVLNDTD-FVSCSND--------ASIRVWDST-TG---KCVHTMYGHPNFIYSVAA--HGDLITS  175 (557)
Q Consensus       112 ~~~l~-~h~~~V~~l~~~~~~~-lvs~s~D--------g~I~vwd~~-~~---~~~~~~~~h~~~V~~l~~--~~~~l~s  175 (557)
                      ...+. .+...+..++|+|+|+ |+.++.+        ..|++||+. ++   +......+|...+..+.|  +|+++++
T Consensus       179 ~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~  258 (662)
T 3azo_A          179 VRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVA  258 (662)
T ss_dssp             SEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEE
T ss_pred             eeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEE
Confidence            56666 6777888999999987 5556644        379999998 57   444444556788999999  6777788


Q ss_pred             EeCCC--eEEEEECCCC--ceEeeC-Ccc--------EEEEEEcCCCc-EEEEEcCCcEEEEec--CCCCcchhHHHhcc
Q psy7057         176 GGEDQ--CVCVYQNKAQ--NSFMIP-AMS--------VWAVAILPNSD-IVTGSSDGIVRVFSA--NPDRQAEDAVQAQY  239 (557)
Q Consensus       176 ~s~Dg--~I~iwd~~~~--~~~~~~-~~~--------v~~v~~~p~g~-l~sg~~Dg~I~iwd~--~~~~~~~~~~~~~~  239 (557)
                      ++.++  .|.+|+....  ..+..+ ...        +.+++++|+++ +++++. +.++||.+  .++....   +..+
T Consensus       259 ~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~~~~---l~~~  334 (662)
T 3azo_A          259 TDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGELVD---AAGP  334 (662)
T ss_dssp             ECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTEEEE---CCSS
T ss_pred             ECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCcEEE---ecCC
Confidence            88888  5666665333  222222 111        56789999998 667777 99999944  4443221   1223


Q ss_pred             cceeEEEeccCCCceeEEEEeCCCcEEEEecC
Q psy7057         240 AEEVKKLKSANEQEIGGVKVSDDGIVRVFSAN  271 (557)
Q Consensus       240 ~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~  271 (557)
                      ...+..+.........+++.+.+....||.++
T Consensus       335 ~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d  366 (662)
T 3azo_A          335 WTEWAATLTVSGTRAVGVAASPRTAYEVVELD  366 (662)
T ss_dssp             CCEEEEEEEEETTEEEEEEEETTEEEEEEEEE
T ss_pred             CCeEEEEEecCCCEEEEEEcCCCCCCEEEEEE
Confidence            33444442223344455666777766666544

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=99.47  E-value=6.8e-13  Score=136.41  Aligned_cols=261  Identities=10%  Similarity=-0.009  Sum_probs=163.2

Q ss_pred             EEEeccCccc-----EEEEEEcCCCc-EEEEEC-C--CcEEEEcCCC----------------CCCCCCCCEEEEEECCC
Q psy7057           5 STALYGHSMD-----VRSLSVTPDGC-ILSASR-D--KSAKLWKPND----------------LSPGAKVNTLLSASWDM   59 (557)
Q Consensus         5 ~~~l~gH~~~-----V~~l~~spdg~-l~sgs~-D--g~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg   59 (557)
                      .+.|..+...     +.+++|+|||+ |+.++. +  ..|.+|++.+                ..++|+++.|+.++.++
T Consensus        23 ~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~  102 (396)
T 3c5m_A           23 VTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNEL  102 (396)
T ss_dssp             EEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTT
T ss_pred             eEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCC
Confidence            3455555433     77889999998 665543 3  3688888765                33688999999999999


Q ss_pred             eEEEEECCCCeEEEEEcccCCcEEE-------------------EEEcCCC-EEEEE-----ECCCeEEEEeCCCcEEEE
Q psy7057          60 TAKLWCLESQQCKLTIRQHEMAVWG-------------------VIQLANG-IIVTG-----CADKTIKLHSEEGEFLKT  114 (557)
Q Consensus        60 ~i~iwd~~~~~~~~~l~~h~~~V~~-------------------l~~~~~~-~l~sg-----s~dg~I~vwd~~~~~~~~  114 (557)
                      .|.+|++.+++.......+......                   +.++|++ .++..     ..+..|.+||..+.....
T Consensus       103 ~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~  182 (396)
T 3c5m_A          103 NLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEV  182 (396)
T ss_dssp             EEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEE
T ss_pred             cEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEe
Confidence            9999999988766655544442222                   2345555 22222     456689999965444444


Q ss_pred             EeCCCCCEEEEEEeC-CCe-EEEEECC------CeEEEEECCCCeEEEEEeCC--CCcEEEEEE--cCCEEEEEeCC---
Q psy7057         115 LTGHTDCVRGLAVLN-DTD-FVSCSND------ASIRVWDSTTGKCVHTMYGH--PNFIYSVAA--HGDLITSGGED---  179 (557)
Q Consensus       115 l~~h~~~V~~l~~~~-~~~-lvs~s~D------g~I~vwd~~~~~~~~~~~~h--~~~V~~l~~--~~~~l~s~s~D---  179 (557)
                      +..+...+..+.|+| ++. |+.++.+      ..|.+||+..++.. .+..+  ...+..++|  +++.|+.++.+   
T Consensus       183 ~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~  261 (396)
T 3c5m_A          183 IHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVR-KIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQ  261 (396)
T ss_dssp             EEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCE-ESSCCCTTEEEEEEEECTTSSCEEEEEEETTT
T ss_pred             eccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCcee-EeeccCCCccccceEECCCCCEEEEEecCCCC
Confidence            445777899999999 665 6655543      46888998665433 33333  235777788  67766666543   


Q ss_pred             --CeEEEEECCCC--ceEeeCCccEEEEEEcC-CCc-EEEEE----------------cCCcEEEEecCCCCcchhHHHh
Q psy7057         180 --QCVCVYQNKAQ--NSFMIPAMSVWAVAILP-NSD-IVTGS----------------SDGIVRVFSANPDRQAEDAVQA  237 (557)
Q Consensus       180 --g~I~iwd~~~~--~~~~~~~~~v~~v~~~p-~g~-l~sg~----------------~Dg~I~iwd~~~~~~~~~~~~~  237 (557)
                        +.|++||+.+.  ..+.... ... +.|+| +|+ +++++                .+..|++|++.++......   
T Consensus       262 ~~~~l~~~d~~~g~~~~l~~~~-~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~---  336 (396)
T 3c5m_A          262 TDRVIYKANPETLENEEVMVMP-PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLC---  336 (396)
T ss_dssp             CCEEEEEECTTTCCEEEEEECC-SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEE---
T ss_pred             ccceEEEEECCCCCeEEeeeCC-CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEcc---
Confidence              45999997665  3333222 233 88999 998 55443                3478999998876543211   


Q ss_pred             cccc-----------eeEEEeccCCCceeEEEEeCCCcEEEEecC
Q psy7057         238 QYAE-----------EVKKLKSANEQEIGGVKVSDDGIVRVFSAN  271 (557)
Q Consensus       238 ~~~~-----------~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~  271 (557)
                      .+..           ......+.++....+++...++...||.++
T Consensus       337 ~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~  381 (396)
T 3c5m_A          337 KHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIAD  381 (396)
T ss_dssp             ECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred             CCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEE
Confidence            1111           122334455554444455567777777654

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=99.47  E-value=2.3e-12  Score=145.11  Aligned_cols=217  Identities=11%  Similarity=0.016  Sum_probs=148.9

Q ss_pred             cccEEEEEEcCCCcEEEEECCCcEEEEcCCC----------------C-----CCCCCCCEEEEEECC---------CeE
Q psy7057          12 SMDVRSLSVTPDGCILSASRDKSAKLWKPND----------------L-----SPGAKVNTLLSASWD---------MTA   61 (557)
Q Consensus        12 ~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~----------------~-----~~~~~~~~l~sgs~D---------g~i   61 (557)
                      .....+++|+|||+++..+ |++|++||+.+                .     .++|++++|+.++.+         +.+
T Consensus        16 ~~~~~~~~w~~dg~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~   94 (740)
T 4a5s_A           16 RLKLYSLRWISDHEYLYKQ-ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASY   94 (740)
T ss_dssp             CCCCCCEEECSSSEEEEEE-TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEE
T ss_pred             cccccccEECCCCcEEEEc-CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEE
Confidence            3446689999999944444 99999999875                1     238999999999886         556


Q ss_pred             EEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcEEEEEe--CCCCCE----------------
Q psy7057          62 KLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFLKTLT--GHTDCV----------------  122 (557)
Q Consensus        62 ~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~~~l~--~h~~~V----------------  122 (557)
                      .+||+.+++.. .+..|...+...+|+|+| .|+.+ .++.|++|+..+.....+.  ++...+                
T Consensus        95 ~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~  172 (740)
T 4a5s_A           95 DIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSA  172 (740)
T ss_dssp             EEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSS
T ss_pred             EEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCC
Confidence            79999998754 466778889999999999 66666 5789999995443333332  333223                


Q ss_pred             -EEEEEeCCCe-EEEEECCC------------------------------------eEEEEECCC---Ce--EEEEEe--
Q psy7057         123 -RGLAVLNDTD-FVSCSNDA------------------------------------SIRVWDSTT---GK--CVHTMY--  157 (557)
Q Consensus       123 -~~l~~~~~~~-lvs~s~Dg------------------------------------~I~vwd~~~---~~--~~~~~~--  157 (557)
                       .++.|+|+|+ |+.++.|.                                    +|++||+.+   ++  ....+.  
T Consensus       173 ~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~  252 (740)
T 4a5s_A          173 YSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAP  252 (740)
T ss_dssp             SBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCC
T ss_pred             CcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCC
Confidence             3589999987 65554221                                    588899988   73  233343  


Q ss_pred             ----CCCCcEEEEEE--cCCEEEEEeC----CCeEEEEECCCCc---------eE--eeCCccEE-----EEEEcCCCc-
Q psy7057         158 ----GHPNFIYSVAA--HGDLITSGGE----DQCVCVYQNKAQN---------SF--MIPAMSVW-----AVAILPNSD-  210 (557)
Q Consensus       158 ----~h~~~V~~l~~--~~~~l~s~s~----Dg~I~iwd~~~~~---------~~--~~~~~~v~-----~v~~~p~g~-  210 (557)
                          +|...+..++|  +++.++....    +..|++||..+..         .+  ..+...+.     .++|+|||+ 
T Consensus       253 ~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~  332 (740)
T 4a5s_A          253 ASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNS  332 (740)
T ss_dssp             HHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSE
T ss_pred             ccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCE
Confidence                37788999999  6775554432    3479999954432         22  23444433     788999998 


Q ss_pred             EE-EEEc-CC--cEEEEecCCCCcc
Q psy7057         211 IV-TGSS-DG--IVRVFSANPDRQA  231 (557)
Q Consensus       211 l~-sg~~-Dg--~I~iwd~~~~~~~  231 (557)
                      |+ ..+. +|  .|++|+..++...
T Consensus       333 l~~~~s~~~G~~~l~~~~~~~~~~~  357 (740)
T 4a5s_A          333 FYKIISNEEGYRHICYFQIDKKDCT  357 (740)
T ss_dssp             EEEEEECTTSCEEEEEEETTCSSCE
T ss_pred             EEEEEEcCCCceEEEEEECCCCceE
Confidence            55 5553 44  5788888765543

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=99.45  E-value=1.2e-11  Score=125.07  Aligned_cols=211  Identities=13%  Similarity=0.052  Sum_probs=151.6

Q ss_pred             CeEEEEECCCCeEEEEEc-ccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCc--EEEEE---------eCCCCCEEEE
Q psy7057          59 MTAKLWCLESQQCKLTIR-QHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGE--FLKTL---------TGHTDCVRGL  125 (557)
Q Consensus        59 g~i~iwd~~~~~~~~~l~-~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~--~~~~l---------~~h~~~V~~l  125 (557)
                      ++|.+||..+++.+..+. ++-..+..+++.+++ ++++.+.++.|++|+.++.  .+..+         .++-...+.|
T Consensus        69 ~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~i  148 (329)
T 3fvz_A           69 DTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDV  148 (329)
T ss_dssp             CCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEE
T ss_pred             CcEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEE
Confidence            579999999888877664 445688999999988 7777778899999998776  56665         3455579999


Q ss_pred             EEeC-CCeEE-EEE-CCCeEEEEECCCCeEEEEEeCCC----------CcEEEEEE--c-CCEEEEEeCCCeEEEEECCC
Q psy7057         126 AVLN-DTDFV-SCS-NDASIRVWDSTTGKCVHTMYGHP----------NFIYSVAA--H-GDLITSGGEDQCVCVYQNKA  189 (557)
Q Consensus       126 ~~~~-~~~lv-s~s-~Dg~I~vwd~~~~~~~~~~~~h~----------~~V~~l~~--~-~~~l~s~s~Dg~I~iwd~~~  189 (557)
                      +++| ++.++ +.+ .++.|++|+ .+++.+..+....          .....|++  + +.++++...+++|++|+..+
T Consensus       149 a~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~  227 (329)
T 3fvz_A          149 AVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDT  227 (329)
T ss_dssp             EECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTT
T ss_pred             EEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCC
Confidence            9999 67755 554 589999999 6788777774322          34788888  4 45677777889999999764


Q ss_pred             C---ceEe--eCCccEEEEEEcCCCc-EEEE-------EcCCcEEEEecCCCCcchhHH-HhcccceeEEEeccCCCcee
Q psy7057         190 Q---NSFM--IPAMSVWAVAILPNSD-IVTG-------SSDGIVRVFSANPDRQAEDAV-QAQYAEEVKKLKSANEQEIG  255 (557)
Q Consensus       190 ~---~~~~--~~~~~v~~v~~~p~g~-l~sg-------~~Dg~I~iwd~~~~~~~~~~~-~~~~~~~v~~l~~~~~~~~~  255 (557)
                      .   ..+.  .+...+++++++| +. +++.       ..+..|++|+..+++...... ..........+...+.. ..
T Consensus       228 G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG-~l  305 (329)
T 3fvz_A          228 KEFVREIKHASFGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDG-TV  305 (329)
T ss_dssp             CCEEEEECCTTTTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTS-EE
T ss_pred             CcEEEEEeccccCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCC-CE
Confidence            4   2232  2345788999999 43 2222       234589999988776543321 11233446677776655 66


Q ss_pred             EEEEeCCCcEEEEecCC
Q psy7057         256 GVKVSDDGIVRVFSANP  272 (557)
Q Consensus       256 ~vs~s~DG~IrvW~~~~  272 (557)
                      +++.+.++.|++|+++.
T Consensus       306 yvad~~~~~I~~~~~~~  322 (329)
T 3fvz_A          306 YIGDAHTNTVWKFTLTE  322 (329)
T ss_dssp             EEEESSSCCEEEEEEEE
T ss_pred             EEEECCCCEEEEEeCCc
Confidence            78888999999999764

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=99.42  E-value=6.1e-12  Score=129.23  Aligned_cols=222  Identities=12%  Similarity=0.075  Sum_probs=150.0

Q ss_pred             EEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC------------------CCCCCCCCEEEEE----------
Q psy7057           5 STALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND------------------LSPGAKVNTLLSA----------   55 (557)
Q Consensus         5 ~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~------------------~~~~~~~~~l~sg----------   55 (557)
                      .+...+|...+.+++|+|||+ |+.++.++.|++||+.+                  +..++++..++..          
T Consensus        73 ~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~  152 (388)
T 3pe7_A           73 TQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPL  152 (388)
T ss_dssp             EECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCC
T ss_pred             EEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccc
Confidence            344456666666788999998 88999999999999876                  1124566666532          


Q ss_pred             ------------ECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcC-CC-EEEEEECC------CeEEEEeCCCcEEEEE
Q psy7057          56 ------------SWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLA-NG-IIVTGCAD------KTIKLHSEEGEFLKTL  115 (557)
Q Consensus        56 ------------s~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~-~~-~l~sgs~d------g~I~vwd~~~~~~~~l  115 (557)
                                  ..+..|.+||+.+++.. .+..+...+..+.|+| ++ .|+..+.+      ..|.++|..+.....+
T Consensus       153 ~~~~~~~~~~~~~~~~~l~~~d~~~g~~~-~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l  231 (388)
T 3pe7_A          153 TDWKKFHEFYFTKPCCRLMRVDLKTGEST-VILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKV  231 (388)
T ss_dssp             CSHHHHHHHGGGCCCEEEEEEETTTCCEE-EEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEES
T ss_pred             cccchhhhhhccCCcceEEEEECCCCceE-EeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEe
Confidence                        24467999999988654 4445677899999999 88 66666653      3688888777666666


Q ss_pred             eCCC--CCEEEEEEeCCCe-EEEEEC--CC---eEEEEECCCCeEE--EEEeCCCCcE-----EEEEEcCCEEEEE----
Q psy7057         116 TGHT--DCVRGLAVLNDTD-FVSCSN--DA---SIRVWDSTTGKCV--HTMYGHPNFI-----YSVAAHGDLITSG----  176 (557)
Q Consensus       116 ~~h~--~~V~~l~~~~~~~-lvs~s~--Dg---~I~vwd~~~~~~~--~~~~~h~~~V-----~~l~~~~~~l~s~----  176 (557)
                      ..+.  ..+..+.|+|+++ |+..+.  +.   .|.+||+.+++..  ..+.++....     ..++.+|+.|+..    
T Consensus       232 ~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~  311 (388)
T 3pe7_A          232 KTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDD  311 (388)
T ss_dssp             CCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC-------
T ss_pred             eeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeec
Confidence            6555  3588899999987 543332  22   3999999988743  3333311000     1344477765543    


Q ss_pred             -----eCCCeEEEEECCCC--ceEeeCCc-----------cEEEEEEcCCCc-EEE-EEcCCcEEEEecCC
Q psy7057         177 -----GEDQCVCVYQNKAQ--NSFMIPAM-----------SVWAVAILPNSD-IVT-GSSDGIVRVFSANP  227 (557)
Q Consensus       177 -----s~Dg~I~iwd~~~~--~~~~~~~~-----------~v~~v~~~p~g~-l~s-g~~Dg~I~iwd~~~  227 (557)
                           ..+..|++||+...  ..+..+..           .+.+++|+|+|+ |+. +..++...||.++-
T Consensus       312 ~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l  382 (388)
T 3pe7_A          312 SGYKIENDPFLYVFNMKNGTQHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATL  382 (388)
T ss_dssp             -----CCCCEEEEEETTTTEEEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEEC
T ss_pred             cccccCCCCEEEEEeccCCceEEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEEC
Confidence                 45678999998765  45555554           578899999998 554 44578888886653

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=99.38  E-value=1.8e-09  Score=106.00  Aligned_cols=259  Identities=9%  Similarity=0.040  Sum_probs=169.4

Q ss_pred             EeccCcccEEEEEEcCCCcEEEEEC-CCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEECCCC
Q psy7057           7 ALYGHSMDVRSLSVTPDGCILSASR-DKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCLESQ   69 (557)
Q Consensus         7 ~l~gH~~~V~~l~~spdg~l~sgs~-Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~   69 (557)
                      .+..+...+.++++.++|.++.+.. ++.|.+||...                +..++++..+++...++.|..|+.. +
T Consensus         9 ~~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g   87 (299)
T 2z2n_A            9 NLTNQDTGPYGITVSDKGKVWITQHKANMISCINLDGKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-G   87 (299)
T ss_dssp             ECCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred             cCCCcCCCccceEECCCCCEEEEecCCCcEEEEcCCCCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-C
Confidence            3455677899999999999666655 78899998654                3445667777776668889999976 3


Q ss_pred             eE-EEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcEEEEE-eCCCCCEEEEEEeCCCeEEE-EECCCeEEEE
Q psy7057          70 QC-KLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFLKTL-TGHTDCVRGLAVLNDTDFVS-CSNDASIRVW  145 (557)
Q Consensus        70 ~~-~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~~~l-~~h~~~V~~l~~~~~~~lvs-~s~Dg~I~vw  145 (557)
                      +. ...+......+.++++.+++ ++++...++.|.+||.++...... ..+...+.++++.+++.+.. ...++.|..|
T Consensus        88 ~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~  167 (299)
T 2z2n_A           88 IIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITDDGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRI  167 (299)
T ss_dssp             CEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEE
T ss_pred             cEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECCCCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEE
Confidence            32 22222345678999999988 555555678999999866554332 23456789999999988664 4456899999


Q ss_pred             ECCCCeEEEE-EeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC-ceEee--CCccEEEEEEcCCCcEEEEE-cCC
Q psy7057         146 DSTTGKCVHT-MYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ-NSFMI--PAMSVWAVAILPNSDIVTGS-SDG  218 (557)
Q Consensus       146 d~~~~~~~~~-~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~-~~~~~--~~~~v~~v~~~p~g~l~sg~-~Dg  218 (557)
                      |. +++.... +..+...+.++++  ++.++++...++.|.+|+.... ..+..  ....+.++++.++|.+..+. .++
T Consensus       168 ~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~  246 (299)
T 2z2n_A          168 TE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITTSGEITEFKIPTPNARPHAITAGAGIDLWFTEWGAN  246 (299)
T ss_dssp             CT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTT
T ss_pred             cC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECCCCcEEEEECCCCCCCceeEEECCCCCEEEeccCCc
Confidence            98 6665443 2334556788888  4566666666889999998222 22222  33578999999999966555 678


Q ss_pred             cEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCC
Q psy7057         219 IVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANP  272 (557)
Q Consensus       219 ~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~  272 (557)
                      .|.+|+.. +... ..........+..+.. +... ..++.+ .+.|..++...
T Consensus       247 ~i~~~d~~-g~~~-~~~~~~~~~~~~~i~~-~~g~-l~v~~~-~~~l~~~~~~~  295 (299)
T 2z2n_A          247 KIGRLTSN-NIIE-EYPIQIKSAEPHGICF-DGET-IWFAME-CDKIGKLTLIK  295 (299)
T ss_dssp             EEEEEETT-TEEE-EEECSSSSCCEEEEEE-CSSC-EEEEET-TTEEEEEEEC-
T ss_pred             eEEEECCC-CceE-EEeCCCCCCccceEEe-cCCC-EEEEec-CCcEEEEEcCc
Confidence            99999984 3221 1111122234555555 3333 334434 45555555543

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=99.38  E-value=2.8e-10  Score=114.40  Aligned_cols=212  Identities=10%  Similarity=0.083  Sum_probs=145.9

Q ss_pred             EEEeccCcccEEEEEEcCCCcEE-EEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECC----CeEEE
Q psy7057           5 STALYGHSMDVRSLSVTPDGCIL-SASRDKSAKLWKPND----------------LSPGAKVNTLLSASWD----MTAKL   63 (557)
Q Consensus         5 ~~~l~gH~~~V~~l~~spdg~l~-sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~D----g~i~i   63 (557)
                      ...+.+|...+.+++|+|+|+|+ ++..++.|.+||..+                +.+++++.++++...+    +.|.+
T Consensus        37 ~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~  116 (333)
T 2dg1_A           37 WLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFA  116 (333)
T ss_dssp             EEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEE
T ss_pred             eEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEE
Confidence            45567777888999999999955 677889999999865                4456677777777666    68999


Q ss_pred             EECCCCeEEEEEc--ccCCcEEEEEEcCCCEEEEEEC-------CCeEEEEeCCCcEEEEEeCCCCCEEEEEEeCCCe-E
Q psy7057          64 WCLESQQCKLTIR--QHEMAVWGVIQLANGIIVTGCA-------DKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTD-F  133 (557)
Q Consensus        64 wd~~~~~~~~~l~--~h~~~V~~l~~~~~~~l~sgs~-------dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~~~-l  133 (557)
                      ||..++.....+.  .+...+.++++.|++.++.++.       .+.|..++..+..+..+..+...+.+++++|++. +
T Consensus       117 ~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l  196 (333)
T 2dg1_A          117 ATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVL  196 (333)
T ss_dssp             ECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEE
T ss_pred             EeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEE
Confidence            9998876543443  2456799999999994444444       2556667655433333433445688999999975 4


Q ss_pred             E-EEECCCeEEEEECCC-CeEEEE--------EeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC--ceEeeCCc-
Q psy7057         134 V-SCSNDASIRVWDSTT-GKCVHT--------MYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ--NSFMIPAM-  198 (557)
Q Consensus       134 v-s~s~Dg~I~vwd~~~-~~~~~~--------~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~--~~~~~~~~-  198 (557)
                      + +.+.++.|.+||+.+ +..+..        +.++ ..+..+++  +++++++...++.|.+|+....  ..+..+.. 
T Consensus       197 ~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~g~~~~~~~~~~~~  275 (333)
T 2dg1_A          197 WVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGYPIGQILIPGRD  275 (333)
T ss_dssp             EEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECTTSCEEEEEECTTGG
T ss_pred             EEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECCCCCEEEEEEcCCCc
Confidence            4 555678999999863 332211        1122 46777888  5677777778899999997433  34444433 


Q ss_pred             -----cEEEEEEcCCCc-EEEEEcC
Q psy7057         199 -----SVWAVAILPNSD-IVTGSSD  217 (557)
Q Consensus       199 -----~v~~v~~~p~g~-l~sg~~D  217 (557)
                           .+.+++|+|++. |+.++.+
T Consensus       276 ~g~~~~~~~~~~~~dg~~L~v~~~~  300 (333)
T 2dg1_A          276 EGHMLRSTHPQFIPGTNQLIICSND  300 (333)
T ss_dssp             GTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred             cccccCcceEEECCCCCEEEEEeCc
Confidence                 588999999975 6555554

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=99.38  E-value=5.1e-12  Score=142.22  Aligned_cols=185  Identities=8%  Similarity=-0.016  Sum_probs=133.8

Q ss_pred             CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCc-----EEEEEEcCCC-EEEEEECC---------CeEEEEeC
Q psy7057          43 LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMA-----VWGVIQLANG-IIVTGCAD---------KTIKLHSE  107 (557)
Q Consensus        43 ~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~-----V~~l~~~~~~-~l~sgs~d---------g~I~vwd~  107 (557)
                      +.+.+++.+++++  |++|++||+.++++...+.+|...     ...+.|+|+| .|+.++.+         +.+.+||.
T Consensus        22 ~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~   99 (740)
T 4a5s_A           22 LRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDL   99 (740)
T ss_dssp             EEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEET
T ss_pred             cEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEEC
Confidence            4567788888886  999999999999988888877543     2347889999 77877776         55679997


Q ss_pred             CCcEEEEEeCCCCCEEEEEEeCCCeEEEEECCCeEEEEECCCCeEEEE-EeCCCCcE-----------------EEEEE-
Q psy7057         108 EGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHT-MYGHPNFI-----------------YSVAA-  168 (557)
Q Consensus       108 ~~~~~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~~~~~-~~~h~~~V-----------------~~l~~-  168 (557)
                      .+.....+..|...+...+|+|+|+.++-..|+.|++|++.+++..+. ..++...+                 .++.| 
T Consensus       100 ~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wS  179 (740)
T 4a5s_A          100 NKRQLITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWS  179 (740)
T ss_dssp             TTTEECCSSCCCTTEEEEEECSSTTCEEEEETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEEC
T ss_pred             CCCcEEEcccCCCcceeeEECCCCCEEEEEECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEEC
Confidence            766666778888899999999998844333578999999988775432 22333323                 23666 


Q ss_pred             -cCCEEEEEeCCC------------------------------------eEEEEECCC---C-----ceEee------CC
Q psy7057         169 -HGDLITSGGEDQ------------------------------------CVCVYQNKA---Q-----NSFMI------PA  197 (557)
Q Consensus       169 -~~~~l~s~s~Dg------------------------------------~I~iwd~~~---~-----~~~~~------~~  197 (557)
                       +|+.|+.++.|.                                    +|++||+.+   .     ..+..      +.
T Consensus       180 pDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~  259 (740)
T 4a5s_A          180 PNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGD  259 (740)
T ss_dssp             TTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSC
T ss_pred             CCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCC
Confidence             788888765321                                    578899766   3     23332      56


Q ss_pred             ccEEEEEEcCCCc-EEEEEc----CCcEEEEecCCCC
Q psy7057         198 MSVWAVAILPNSD-IVTGSS----DGIVRVFSANPDR  229 (557)
Q Consensus       198 ~~v~~v~~~p~g~-l~sg~~----Dg~I~iwd~~~~~  229 (557)
                      ..+..++|+|+|+ ++....    +..|++||+.++.
T Consensus       260 ~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~  296 (740)
T 4a5s_A          260 HYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESS  296 (740)
T ss_dssp             EEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred             eEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCc
Confidence            6799999999999 444332    3479999998775

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=99.37  E-value=8.8e-12  Score=139.25  Aligned_cols=219  Identities=9%  Similarity=0.025  Sum_probs=151.4

Q ss_pred             cCcccEEEEEEcCCCc-EE-E----EECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCe-------
Q psy7057          10 GHSMDVRSLSVTPDGC-IL-S----ASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMT-------   60 (557)
Q Consensus        10 gH~~~V~~l~~spdg~-l~-s----gs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~-------   60 (557)
                      +|...+.+++|||||+ |+ +    |+.+.+|++||+.+                +++++++..|+.++.|..       
T Consensus       118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~  197 (695)
T 2bkl_A          118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDE  197 (695)
T ss_dssp             SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGG
T ss_pred             CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCcccc
Confidence            4666799999999998 55 2    33346899999865                456788999999999876       


Q ss_pred             ------EEEEECCCCe----EEEEEcccCCcEEEEEEcCCC-EEEEEECCC----eEEEEeCCCcEEEEEeCCCCCEEEE
Q psy7057          61 ------AKLWCLESQQ----CKLTIRQHEMAVWGVIQLANG-IIVTGCADK----TIKLHSEEGEFLKTLTGHTDCVRGL  125 (557)
Q Consensus        61 ------i~iwd~~~~~----~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg----~I~vwd~~~~~~~~l~~h~~~V~~l  125 (557)
                            |++|++.++.    ++.....|...+.++.|+|+| .|+.++.++    .|.+|+..+.....+..+...+...
T Consensus       198 ~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~  277 (695)
T 2bkl_A          198 RPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEV  277 (695)
T ss_dssp             GGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEE
T ss_pred             CCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEE
Confidence                  9999998875    333344466788999999999 666666555    6777775444455566666666666


Q ss_pred             EEeCCCeEEEEEC----CCeEEEEECCCCeE---EEEEeCC-CCcEEEEEE-cCCEEEEEeCCCeEEEEECC--CC--ce
Q psy7057         126 AVLNDTDFVSCSN----DASIRVWDSTTGKC---VHTMYGH-PNFIYSVAA-HGDLITSGGEDQCVCVYQNK--AQ--NS  192 (557)
Q Consensus       126 ~~~~~~~lvs~s~----Dg~I~vwd~~~~~~---~~~~~~h-~~~V~~l~~-~~~~l~s~s~Dg~I~iwd~~--~~--~~  192 (557)
                      .+++++ ++..+.    ++.|.+||+.+++.   ...+..+ ...+..+++ ++.++++...|+..++|...  ..  ..
T Consensus       278 ~~~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~~~~~  356 (695)
T 2bkl_A          278 HAWKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIVGGHLSLEYLKDATSEVRVATLKGKPVRT  356 (695)
T ss_dssp             EEETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEETTEEEEEEEETTEEEEEEEETTCCEEEE
T ss_pred             EecCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCCCCeeEE
Confidence            664444 554443    58899999987652   3333333 456777888 55577888899988887532  22  33


Q ss_pred             EeeC-CccEEEEEEcCCCc-EE-EEE---cCCcEEEEecCCCC
Q psy7057         193 FMIP-AMSVWAVAILPNSD-IV-TGS---SDGIVRVFSANPDR  229 (557)
Q Consensus       193 ~~~~-~~~v~~v~~~p~g~-l~-sg~---~Dg~I~iwd~~~~~  229 (557)
                      +..+ ...+..++++|++. ++ +.+   ..++|++||+.+++
T Consensus       357 l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~  399 (695)
T 2bkl_A          357 VQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGK  399 (695)
T ss_dssp             CCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCC
T ss_pred             ecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence            4444 45677888899886 44 332   25789999998765

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=99.36  E-value=8.8e-11  Score=118.66  Aligned_cols=241  Identities=10%  Similarity=0.017  Sum_probs=156.8

Q ss_pred             ccEEEEEEcCCCc-EEEE---------ECCCcEEEEcCCC-----------CCCCCCCCEEEEEECC---C--eEEEEEC
Q psy7057          13 MDVRSLSVTPDGC-ILSA---------SRDKSAKLWKPND-----------LSPGAKVNTLLSASWD---M--TAKLWCL   66 (557)
Q Consensus        13 ~~V~~l~~spdg~-l~sg---------s~Dg~V~iWd~~~-----------~~~~~~~~~l~sgs~D---g--~i~iwd~   66 (557)
                      ..+..+++  ||+ ++..         +.++.|.+|++.+           +.++|+++.|+.++.+   +  .|.+|++
T Consensus        15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~   92 (347)
T 2gop_A           15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRFIENATMPRISPDGKKIAFMRANEEKKVSEIWVADL   92 (347)
T ss_dssp             CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEEESCEEEEECTTSSEEEEEEEETTTTEEEEEEEET
T ss_pred             EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEEcccCCCeEECCCCCEEEEEEeccCCCcceEEEEEC
Confidence            46777888  776 5433         1266788898765           5788999999888754   3  4788888


Q ss_pred             CCCeEEEEEcccCCcEEEEEEcCCC-EEEEEEC---------------------------CCeEEEEeCCCcEE-EEEeC
Q psy7057          67 ESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCA---------------------------DKTIKLHSEEGEFL-KTLTG  117 (557)
Q Consensus        67 ~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~---------------------------dg~I~vwd~~~~~~-~~l~~  117 (557)
                      .+++.......+ . +.+++|+|++ .|+.++.                           ...|.+||..+... ..+..
T Consensus        93 ~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~  170 (347)
T 2gop_A           93 ETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK  170 (347)
T ss_dssp             TTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE
T ss_pred             CCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC
Confidence            887765544433 3 9999999998 6666653                           25688899654443 55554


Q ss_pred             CCCCEEEEEEeCCCeEE-EEECCC-------eEEEEECCCCeEEEEEeCCCCcEEEEEEcCCEEEEEeCC--------Ce
Q psy7057         118 HTDCVRGLAVLNDTDFV-SCSNDA-------SIRVWDSTTGKCVHTMYGHPNFIYSVAAHGDLITSGGED--------QC  181 (557)
Q Consensus       118 h~~~V~~l~~~~~~~lv-s~s~Dg-------~I~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~l~s~s~D--------g~  181 (557)
                       . .+..++|+|++ ++ +++.+.       ...||.+.+++. ..+..+ ..+.+++.+|+.|+.++.+        ..
T Consensus       171 -~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~l~~~-~~~~~~spdg~~l~~~~~~~~~~~~~~~~  245 (347)
T 2gop_A          171 -P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKE-EKMFEK-VSFYAVDSDGERILLYGKPEKKYMSEHNK  245 (347)
T ss_dssp             -E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEE-EEEEEE-ESEEEEEECSSCEEEEECCSSSCCCSSCE
T ss_pred             -C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCce-EEeccC-cceeeECCCCCEEEEEEccccCCccccce
Confidence             3 78899999999 55 554432       334444335554 344444 6666666688887777644        46


Q ss_pred             EEEEECCCC-ceE-eeCCccEEE-EEEcCCCcEEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEE
Q psy7057         182 VCVYQNKAQ-NSF-MIPAMSVWA-VAILPNSDIVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVK  258 (557)
Q Consensus       182 I~iwd~~~~-~~~-~~~~~~v~~-v~~~p~g~l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs  258 (557)
                      |.+|| ... ..+ ..+...+.. +.|+ ++-+++++.++.++|| +..+....   .......+..+.+.+  . .+++
T Consensus       246 l~~~d-~~~~~~l~~~~~~~~~~~~~~s-dg~~~~~~~~~~~~l~-~~~g~~~~---~~~~~~~v~~~~~s~--~-~~~~  316 (347)
T 2gop_A          246 LYIYD-GKEVMGILDEVDRGVGQAKIKD-GKVYFTLFEEGSVNLY-IWDGEIKP---IAKGRHWIMGFDVDE--I-VVYL  316 (347)
T ss_dssp             EEEEC-SSCEEESSTTCCSEEEEEEEET-TEEEEEEEETTEEEEE-EESSSEEE---EECSSSEEEEEEESS--S-EEEE
T ss_pred             EEEEC-CCceEeccccCCcccCCccEEc-CcEEEEEecCCcEEEE-EcCCceEE---EecCCCeEEeeeeeC--c-EEEE
Confidence            88888 322 222 233456776 8898 7745678889999999 87433211   112245566666665  3 4566


Q ss_pred             EeCCCcE-EEEecC
Q psy7057         259 VSDDGIV-RVFSAN  271 (557)
Q Consensus       259 ~s~DG~I-rvW~~~  271 (557)
                      ++.++.. +||.++
T Consensus       317 ~~~~~~~~~l~~~~  330 (347)
T 2gop_A          317 KETATRLRELFTWD  330 (347)
T ss_dssp             EECSSSCCEEEEES
T ss_pred             EcCCCChHHheEeC
Confidence            6666665 888765

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=99.35  E-value=7e-11  Score=114.91  Aligned_cols=214  Identities=9%  Similarity=0.054  Sum_probs=148.6

Q ss_pred             cEEEEEEcCCCcEEE-E-ECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEE
Q psy7057          14 DVRSLSVTPDGCILS-A-SRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTI   75 (557)
Q Consensus        14 ~V~~l~~spdg~l~s-g-s~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l   75 (557)
                      ...+++++++|+|+. + +.++.|.+|+...                +.+++++..+++.. ++.|.+|+..+.... .+
T Consensus        25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~-~~  102 (270)
T 1rwi_B           25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQT-VL  102 (270)
T ss_dssp             CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCE-EC
T ss_pred             CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEe-ee
Confidence            678999999999555 5 6788999998754                34455677555554 889999998765432 23


Q ss_pred             c-ccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcE-EEEEeCCCCCEEEEEEeCCCeEE-EEECCCeEEEEECCCCe
Q psy7057          76 R-QHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEF-LKTLTGHTDCVRGLAVLNDTDFV-SCSNDASIRVWDSTTGK  151 (557)
Q Consensus        76 ~-~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~-~~~l~~h~~~V~~l~~~~~~~lv-s~s~Dg~I~vwd~~~~~  151 (557)
                      . .....+.++++.+++ ++++...++.|.+|+..... ..........+.++++++++.++ +...++.|.+||.....
T Consensus       103 ~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~  182 (270)
T 1rwi_B          103 PFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNN  182 (270)
T ss_dssp             CCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCC
T ss_pred             ecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCc
Confidence            2 233678999999988 55555667899999743222 22222333467889999988755 55567899999987766


Q ss_pred             EEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCCc-eEe--eCCccEEEEEEcCCCc-EEEEEcCCcEEEEec
Q psy7057         152 CVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQN-SFM--IPAMSVWAVAILPNSD-IVTGSSDGIVRVFSA  225 (557)
Q Consensus       152 ~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~~-~~~--~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~  225 (557)
                      .......+...+.+|++  ++.++++...++.|.+|+..... ...  .....+.++++.++|. +++...++.|++++.
T Consensus       183 ~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~  262 (270)
T 1rwi_B          183 QVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTS  262 (270)
T ss_dssp             EEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECC
T ss_pred             eEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcC
Confidence            54433334467888998  45566666678899999976542 211  1224689999999999 566677999999998


Q ss_pred             CCCC
Q psy7057         226 NPDR  229 (557)
Q Consensus       226 ~~~~  229 (557)
                      ...+
T Consensus       263 ~~~~  266 (270)
T 1rwi_B          263 LEHH  266 (270)
T ss_dssp             CGGG
T ss_pred             CCcc
Confidence            7554

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=99.34  E-value=1.9e-10  Score=128.74  Aligned_cols=218  Identities=12%  Similarity=0.049  Sum_probs=152.2

Q ss_pred             CcccEEEEEEcCCCc-EEEEEC-CC----cEEEEcCCC---------------CCCCCCCCEEEEEECCCe---------
Q psy7057          11 HSMDVRSLSVTPDGC-ILSASR-DK----SAKLWKPND---------------LSPGAKVNTLLSASWDMT---------   60 (557)
Q Consensus        11 H~~~V~~l~~spdg~-l~sgs~-Dg----~V~iWd~~~---------------~~~~~~~~~l~sgs~Dg~---------   60 (557)
                      |...+.+++|||||+ |+.++. .|    +|++||+.+               ++++++++.|+.++.++.         
T Consensus       123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~  202 (710)
T 2xdw_A          123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTET  202 (710)
T ss_dssp             SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCC
T ss_pred             CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCcccccccccc
Confidence            445688999999998 665443 33    899999876               568889999999998876         


Q ss_pred             -------EEEEECCCCe----EEEEEcccCCcEEEEEEcCCC-EEEEEEC-----CCeEEEEeCCC-------c-EEEEE
Q psy7057          61 -------AKLWCLESQQ----CKLTIRQHEMAVWGVIQLANG-IIVTGCA-----DKTIKLHSEEG-------E-FLKTL  115 (557)
Q Consensus        61 -------i~iwd~~~~~----~~~~l~~h~~~V~~l~~~~~~-~l~sgs~-----dg~I~vwd~~~-------~-~~~~l  115 (557)
                             |++|++.+++    .+.....|...+..+.|+|+| .|+.++.     +..|.+||...       . ....+
T Consensus       203 ~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l  282 (710)
T 2xdw_A          203 STNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKL  282 (710)
T ss_dssp             CCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEE
T ss_pred             ccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEe
Confidence                   9999998875    222333356668899999999 5655554     56899999543       2 46667


Q ss_pred             eCCCCCEEEEEEeCCCe-EEEEECC----CeEEEEECCCCe--EEEEEeCCCC--cEEEEEEc-CC-EEEEEeCCCe--E
Q psy7057         116 TGHTDCVRGLAVLNDTD-FVSCSND----ASIRVWDSTTGK--CVHTMYGHPN--FIYSVAAH-GD-LITSGGEDQC--V  182 (557)
Q Consensus       116 ~~h~~~V~~l~~~~~~~-lvs~s~D----g~I~vwd~~~~~--~~~~~~~h~~--~V~~l~~~-~~-~l~s~s~Dg~--I  182 (557)
                      ..+...+... +++++. |+..+..    ..|.+||+.++.  ....+..|..  .+..+++. +. ++++...++.  |
T Consensus       283 ~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l  361 (710)
T 2xdw_A          283 IDNFEGEYDY-VTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTL  361 (710)
T ss_dssp             ECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEE
T ss_pred             eCCCCcEEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEE
Confidence            7777766654 666654 5544443    369999988764  2344555544  67778873 44 6677778875  5


Q ss_pred             EEEECCCC---ceEeeCCccEEEEEEcCCCc-EE-EEEc---CCcEEEEecCCCC
Q psy7057         183 CVYQNKAQ---NSFMIPAMSVWAVAILPNSD-IV-TGSS---DGIVRVFSANPDR  229 (557)
Q Consensus       183 ~iwd~~~~---~~~~~~~~~v~~v~~~p~g~-l~-sg~~---Dg~I~iwd~~~~~  229 (557)
                      ++|++...   ..+..+...+..++++|++. ++ +.++   .++|++||+.+++
T Consensus       362 ~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~  416 (710)
T 2xdw_A          362 QLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE  416 (710)
T ss_dssp             EEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred             EEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence            56676333   45666667788999999886 44 3332   5789999997765

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=99.33  E-value=2.5e-10  Score=113.00  Aligned_cols=220  Identities=13%  Similarity=0.079  Sum_probs=153.3

Q ss_pred             EEeccCcccEEEEEEcCCCc--EEEEECCCcEEEEcCCC--------------CCCCCCCCEEEEEECCCeEEEEECCCC
Q psy7057           6 TALYGHSMDVRSLSVTPDGC--ILSASRDKSAKLWKPND--------------LSPGAKVNTLLSASWDMTAKLWCLESQ   69 (557)
Q Consensus         6 ~~l~gH~~~V~~l~~spdg~--l~sgs~Dg~V~iWd~~~--------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~   69 (557)
                      ..+..+.....+++|+|+|.  ++++..++.|..|+..+              +.+++++.++++...++.|.+||..++
T Consensus        21 ~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g  100 (296)
T 3e5z_A           21 RRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQLSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGG  100 (296)
T ss_dssp             EEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSCEEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTC
T ss_pred             EEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCCeEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCC
Confidence            34556667789999999997  56778899999999764              556778887777777799999999888


Q ss_pred             eEEEEEccc----CCcEEEEEEcCCC-EEEE----EE-------------CCCeEEEEeCCCcEEEEEeCCCCCEEEEEE
Q psy7057          70 QCKLTIRQH----EMAVWGVIQLANG-IIVT----GC-------------ADKTIKLHSEEGEFLKTLTGHTDCVRGLAV  127 (557)
Q Consensus        70 ~~~~~l~~h----~~~V~~l~~~~~~-~l~s----gs-------------~dg~I~vwd~~~~~~~~l~~h~~~V~~l~~  127 (557)
                      +........    ...+..+++.|+| ++++    |+             ..+.|..++..+. +..+..+......+++
T Consensus       101 ~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g~-~~~~~~~~~~~~gi~~  179 (296)
T 3e5z_A          101 EWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGT-LSAPIRDRVKPNGLAF  179 (296)
T ss_dssp             CEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSC-EEEEECCCSSEEEEEE
T ss_pred             cEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCCCC-EEEeecCCCCCccEEE
Confidence            755443322    2345679999999 5555    32             1346666765544 4445567777899999


Q ss_pred             eCCCe-EEEEECCCeEEEEECC-CCeE---EEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC--ceEeeCCc
Q psy7057         128 LNDTD-FVSCSNDASIRVWDST-TGKC---VHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ--NSFMIPAM  198 (557)
Q Consensus       128 ~~~~~-lvs~s~Dg~I~vwd~~-~~~~---~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~--~~~~~~~~  198 (557)
                      +|++. +++.+.++.|.+|++. +++.   ...+..+...+.++++  +|+++++.  ++.|.+|+....  ..+..+..
T Consensus       180 s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~g~~~~~~~~~~~  257 (296)
T 3e5z_A          180 LPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPDGDELGRVLTPQT  257 (296)
T ss_dssp             CTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTTSCEEEEEECSSC
T ss_pred             CCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCCCCEEEEEECCCC
Confidence            99987 5566677899999986 5554   3344334556677888  56655544  889999997643  45555665


Q ss_pred             cEEEEEE-cCCCc-EEEEEcCCcEEEEecCCCCc
Q psy7057         199 SVWAVAI-LPNSD-IVTGSSDGIVRVFSANPDRQ  230 (557)
Q Consensus       199 ~v~~v~~-~p~g~-l~sg~~Dg~I~iwd~~~~~~  230 (557)
                       +.+++| .|+++ |++++.++ +.-++..+.+.
T Consensus       258 -~~~~~f~~~d~~~L~v~t~~~-l~~~~~~~~~~  289 (296)
T 3e5z_A          258 -TSNLCFGGPEGRTLYMTVSTE-FWSIETNVRGL  289 (296)
T ss_dssp             -CCEEEEESTTSCEEEEEETTE-EEEEECSCCBC
T ss_pred             -ceeEEEECCCCCEEEEEcCCe-EEEEEcccccc
Confidence             889999 57877 77777664 44445555443

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=99.32  E-value=3.6e-10  Score=111.42  Aligned_cols=181  Identities=13%  Similarity=0.093  Sum_probs=138.0

Q ss_pred             CCCEEEEEECCCeEEEEECCCCeEEEEEcccC-CcEEEEEEcCCCEEEEEECCCeEEEEeCCCcEEEEEeCCC-CCEEEE
Q psy7057          48 KVNTLLSASWDMTAKLWCLESQQCKLTIRQHE-MAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKTLTGHT-DCVRGL  125 (557)
Q Consensus        48 ~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~-~~V~~l~~~~~~~l~sgs~dg~I~vwd~~~~~~~~l~~h~-~~V~~l  125 (557)
                      .++.|++++.++.|.+||.++++.+.++..+. ..+.++.++|+|.++. +.++.|..||.+++.+..+..+. ..+.++
T Consensus         4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv-s~~~~V~~~d~~G~~~W~~~~~~~~~~~~~   82 (276)
T 3no2_A            4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF-SYSKGAKMITRDGRELWNIAAPAGCEMQTA   82 (276)
T ss_dssp             CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE-ECBSEEEEECTTSCEEEEEECCTTCEEEEE
T ss_pred             CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE-eCCCCEEEECCCCCEEEEEcCCCCcccccc
Confidence            36789999999999999999999999998776 4788999999994444 56888999999999999988753 578899


Q ss_pred             EEeCCCeEE-EEEC-CCeEEEEECCCCeEEEEEeC------CCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC--ceE
Q psy7057         126 AVLNDTDFV-SCSN-DASIRVWDSTTGKCVHTMYG------HPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ--NSF  193 (557)
Q Consensus       126 ~~~~~~~lv-s~s~-Dg~I~vwd~~~~~~~~~~~~------h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~--~~~  193 (557)
                      .+.+++.++ +.+. ++.|..+|. +++.+.++..      +......+++  +++++++.+.++.|..||....  .++
T Consensus        83 ~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~G~~~w~~  161 (276)
T 3no2_A           83 RILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPNGQLLNSV  161 (276)
T ss_dssp             EECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTTSCEEEEE
T ss_pred             EECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCCCCEEEEE
Confidence            999998844 5565 678888884 7888777652      1122333444  7889999999999999997622  222


Q ss_pred             eeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcc
Q psy7057         194 MIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQA  231 (557)
Q Consensus       194 ~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~  231 (557)
                      ... ..+.++.+.+++. +++++.++.|..+|..+++..
T Consensus       162 ~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~  199 (276)
T 3no2_A          162 KLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIV  199 (276)
T ss_dssp             ECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEE
T ss_pred             ECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEE
Confidence            222 3566788899998 556666778999998877654

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=99.32  E-value=5.7e-10  Score=112.69  Aligned_cols=217  Identities=11%  Similarity=-0.055  Sum_probs=149.3

Q ss_pred             CEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCCEEEEEE-CCCeEEEEeC-CCcEEEEEeCCC-----CCE
Q psy7057          50 NTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGC-ADKTIKLHSE-EGEFLKTLTGHT-----DCV  122 (557)
Q Consensus        50 ~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~~l~sgs-~dg~I~vwd~-~~~~~~~l~~h~-----~~V  122 (557)
                      ..+++...+++|.+||..+++.+.++. .......+++++++.+..+. .++.|.+||. +++....+....     ...
T Consensus        55 ~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p  133 (328)
T 3dsm_A           55 IGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGST  133 (328)
T ss_dssp             EEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBC
T ss_pred             EEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCc
Confidence            344555557999999999999988885 45678899998888555555 8999999995 455555555322     145


Q ss_pred             EEEEEeCCCeEEEEE--CCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCC----------CeEEEEECC
Q psy7057         123 RGLAVLNDTDFVSCS--NDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGED----------QCVCVYQNK  188 (557)
Q Consensus       123 ~~l~~~~~~~lvs~s--~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~D----------g~I~iwd~~  188 (557)
                      ..+++ .++.++.+.  .+++|.++|+.+++.+.++... .....+.+  ++++++++..+          +.|.++|..
T Consensus       134 ~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g-~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~  211 (328)
T 3dsm_A          134 EQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELTIG-IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAE  211 (328)
T ss_dssp             CCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEECS-SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETT
T ss_pred             ceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC-CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECC
Confidence            66777 456655554  4899999999999988887643 23456666  56666665554          789999987


Q ss_pred             CCc---eEeeC-CccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEE----
Q psy7057         189 AQN---SFMIP-AMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKV----  259 (557)
Q Consensus       189 ~~~---~~~~~-~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~----  259 (557)
                      +.+   .+..+ ......++++|+++ ++++..  .|.+||..+.+................+...+......++.    
T Consensus       212 t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y  289 (328)
T 3dsm_A          212 TFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDY  289 (328)
T ss_dssp             TTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTS
T ss_pred             CCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEccccc
Confidence            663   33322 23689999999888 555443  89999998766432111111123456677766566666777    


Q ss_pred             eCCCcEEEEecC
Q psy7057         260 SDDGIVRVFSAN  271 (557)
Q Consensus       260 s~DG~IrvW~~~  271 (557)
                      ..+|.|.+|+.+
T Consensus       290 ~~~~~V~v~d~~  301 (328)
T 3dsm_A          290 QQQGIVYRYSPQ  301 (328)
T ss_dssp             SSEEEEEEECTT
T ss_pred             ccCCEEEEECCC
Confidence            778999999976

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=99.32  E-value=1.5e-10  Score=116.41  Aligned_cols=214  Identities=11%  Similarity=0.083  Sum_probs=147.2

Q ss_pred             ccEEEEEEcCCCc-EEEEECCCcEEEEcCCC-------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEccc
Q psy7057          13 MDVRSLSVTPDGC-ILSASRDKSAKLWKPND-------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQH   78 (557)
Q Consensus        13 ~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~-------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h   78 (557)
                      ..|.+++|++++. ++..+.++.++.|.-..             +.+++++.+++++..++.|.+||..+++.......+
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~   85 (333)
T 2dg1_A            6 QDLPTLFYSGKSNSAVPIISESELQTITAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSH   85 (333)
T ss_dssp             CCCCBCCSCGGGGCSSCCCCGGGSCEEECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECS
T ss_pred             cccceeeecCCccceeEEeecccCcccccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCC
Confidence            4577888888876 55667788888883221             456678887788888999999999888766555456


Q ss_pred             CCcEEEEEEcCCC-EEEEEECC----CeEEEEeCCCcEEE-EEe--CCCCCEEEEEEeCCCeEEEEEC-------CCeEE
Q psy7057          79 EMAVWGVIQLANG-IIVTGCAD----KTIKLHSEEGEFLK-TLT--GHTDCVRGLAVLNDTDFVSCSN-------DASIR  143 (557)
Q Consensus        79 ~~~V~~l~~~~~~-~l~sgs~d----g~I~vwd~~~~~~~-~l~--~h~~~V~~l~~~~~~~lvs~s~-------Dg~I~  143 (557)
                      ...+.++++++++ ++++...+    +.|.+||..+.... .+.  .+...+.+++++|++.++.++.       .+.|.
T Consensus        86 ~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~  165 (333)
T 2dg1_A           86 KANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVY  165 (333)
T ss_dssp             SSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEE
T ss_pred             CCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEE
Confidence            7889999999998 45554455    58999996554433 332  2456799999999988665554       25566


Q ss_pred             EEECCCCeEEEEEeCCCCcEEEEEE--cCCEE-EEEeCCCeEEEEECCC-C---ceE-----eeCC--ccEEEEEEcCCC
Q psy7057         144 VWDSTTGKCVHTMYGHPNFIYSVAA--HGDLI-TSGGEDQCVCVYQNKA-Q---NSF-----MIPA--MSVWAVAILPNS  209 (557)
Q Consensus       144 vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l-~s~s~Dg~I~iwd~~~-~---~~~-----~~~~--~~v~~v~~~p~g  209 (557)
                      .+|..+++... +..+...+..+++  +++.| ++.+.++.|.+|+... .   ..+     ....  ..+..+++.++|
T Consensus       166 ~~~~~~~~~~~-~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G  244 (333)
T 2dg1_A          166 YVSPDFRTVTP-IIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDD  244 (333)
T ss_dssp             EECTTSCCEEE-EEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTC
T ss_pred             EEeCCCCEEEE-eecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCC
Confidence            77765555433 2223345778888  56655 4555678999999743 1   111     1111  367889999999


Q ss_pred             cEE-EEEcCCcEEEEecCC
Q psy7057         210 DIV-TGSSDGIVRVFSANP  227 (557)
Q Consensus       210 ~l~-sg~~Dg~I~iwd~~~  227 (557)
                      .+. +...++.|++|+.+.
T Consensus       245 ~l~v~~~~~~~v~~~d~~g  263 (333)
T 2dg1_A          245 NLYVAMYGQGRVLVFNKRG  263 (333)
T ss_dssp             CEEEEEETTTEEEEECTTS
T ss_pred             CEEEEEcCCCEEEEECCCC
Confidence            954 445678999999853

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=99.31  E-value=2.3e-10  Score=117.28  Aligned_cols=218  Identities=12%  Similarity=0.090  Sum_probs=146.2

Q ss_pred             EEEEEeccCcccEEEEEEcCCCc-EEEEE----------CCCcEEEEcCCC----------------------CCCCCCC
Q psy7057           3 KLSTALYGHSMDVRSLSVTPDGC-ILSAS----------RDKSAKLWKPND----------------------LSPGAKV   49 (557)
Q Consensus         3 kl~~~l~gH~~~V~~l~~spdg~-l~sgs----------~Dg~V~iWd~~~----------------------~~~~~~~   49 (557)
                      ++..++..+..+  .++|+|||+ |++++          .+++|.+||..+                      +.+++++
T Consensus        42 ~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg  119 (361)
T 2oiz_A           42 KFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDG  119 (361)
T ss_dssp             CEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTS
T ss_pred             eEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCC
Confidence            455667776666  899999998 66654          367899999875                      3567789


Q ss_pred             CEEEEEEC--CCeEEEEECCCCeEEEE-EcccCCcEEEEEEcCCC--EEEEEECCCeEEEEeC--CCcEEEEE------e
Q psy7057          50 NTLLSASW--DMTAKLWCLESQQCKLT-IRQHEMAVWGVIQLANG--IIVTGCADKTIKLHSE--EGEFLKTL------T  116 (557)
Q Consensus        50 ~~l~sgs~--Dg~i~iwd~~~~~~~~~-l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~--~~~~~~~l------~  116 (557)
                      ++|++++.  +++|.+||+.+++.+.+ +. +... ..+.+.|++  .+++.+.||.+.+|+.  .++.....      .
T Consensus       120 ~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~-~~~~-~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~  197 (361)
T 2oiz_A          120 KFIVLQNASPATSIGIVDVAKGDYVEDVTA-AAGC-WSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFS  197 (361)
T ss_dssp             SEEEEEEESSSEEEEEEETTTTEEEEEEGG-GTTE-EEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSC
T ss_pred             CEEEEECCCCCCeEEEEECCCCcEEEEEec-CCCc-ceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEc
Confidence            99998874  58999999999988877 44 3322 335667765  7889999999999883  35544221      1


Q ss_pred             CCCCCEEEEEEeCCC-eEEEEECCCeEEEEECCCCe--EEEEEeCCC----------C--cEEEEEEcCCEEEEEeC---
Q psy7057         117 GHTDCVRGLAVLNDT-DFVSCSNDASIRVWDSTTGK--CVHTMYGHP----------N--FIYSVAAHGDLITSGGE---  178 (557)
Q Consensus       117 ~h~~~V~~l~~~~~~-~lvs~s~Dg~I~vwd~~~~~--~~~~~~~h~----------~--~V~~l~~~~~~l~s~s~---  178 (557)
                      .+..++ .+.+++++ .++..+.++.|.++|+....  .+..+.-..          .  ....+..+++.++++..   
T Consensus       198 ~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~  276 (361)
T 2oiz_A          198 VKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDG  276 (361)
T ss_dssp             TTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSC
T ss_pred             CCCCce-EEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCC
Confidence            222222 22224444 46666788999999986543  223322111          1  11233336666665432   


Q ss_pred             --------CCeEEEEECCCC---ceEeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCC
Q psy7057         179 --------DQCVCVYQNKAQ---NSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPD  228 (557)
Q Consensus       179 --------Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~  228 (557)
                              ...|.+||+.+.   ..+..+.  +++++|+|+|+ +++++. ++|.+||..+.
T Consensus       277 ~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~  335 (361)
T 2oiz_A          277 KEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQP  335 (361)
T ss_dssp             CTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSS
T ss_pred             CcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCC
Confidence                    358999998777   4445555  99999999999 555555 99999999887

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=99.29  E-value=1.5e-10  Score=118.82  Aligned_cols=208  Identities=14%  Similarity=0.093  Sum_probs=135.8

Q ss_pred             EEEEcCCCc-EEEEECCCcEEEEcCCCC----------CCCCCCCEEEE-------------------------E-----
Q psy7057          17 SLSVTPDGC-ILSASRDKSAKLWKPNDL----------SPGAKVNTLLS-------------------------A-----   55 (557)
Q Consensus        17 ~l~~spdg~-l~sgs~Dg~V~iWd~~~~----------~~~~~~~~l~s-------------------------g-----   55 (557)
                      .+.|+|||+ |+.++.++.|.+|++.+-          .+.+++..|+.                         +     
T Consensus        85 ~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~  164 (396)
T 3c5m_A           85 GGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHT  164 (396)
T ss_dssp             TCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHT
T ss_pred             cceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccC
Confidence            478999998 888999999999998761          11112222221                         1     


Q ss_pred             ECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcC-CC-EEEEEECC------CeEEEEeCCCcEEEEEeCCC--CCEEEE
Q psy7057          56 SWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLA-NG-IIVTGCAD------KTIKLHSEEGEFLKTLTGHT--DCVRGL  125 (557)
Q Consensus        56 s~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~-~~-~l~sgs~d------g~I~vwd~~~~~~~~l~~h~--~~V~~l  125 (557)
                      ..+..|.+||+.+++..... .+...+..+.|+| ++ .|+..+.+      ..|.+|+..+.....+..+.  ..+..+
T Consensus       165 ~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~  243 (396)
T 3c5m_A          165 NPTCRLIKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHE  243 (396)
T ss_dssp             CCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEE
T ss_pred             CCcceEEEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccce
Confidence            34568999999888765444 5677899999999 66 56665543      35888887665555554442  358889


Q ss_pred             EEeCCCe-EEEEECC-----CeEEEEECCCCeEEEEEeCCCCcEEEEEE-cCCEEEEEe----------------CCCeE
Q psy7057         126 AVLNDTD-FVSCSND-----ASIRVWDSTTGKCVHTMYGHPNFIYSVAA-HGDLITSGG----------------EDQCV  182 (557)
Q Consensus       126 ~~~~~~~-lvs~s~D-----g~I~vwd~~~~~~~~~~~~h~~~V~~l~~-~~~~l~s~s----------------~Dg~I  182 (557)
                      .|+|++. |+.++.+     +.|++||+.+++...... .......... +++++++++                .+..|
T Consensus       244 ~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~~~~~~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i  322 (396)
T 3c5m_A          244 FWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMV-MPPCSHLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFL  322 (396)
T ss_dssp             EECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEE-CCSEEEEEECSSSSEEEEEECCC----------CCCCCCEE
T ss_pred             EECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeee-CCCCCCCccCCCCceEEEecCCcceeeccccccccCCCCcE
Confidence            9999987 6655443     459999998887544332 1221122333 677777654                34789


Q ss_pred             EEEECCCC--ceEeeCCc-----------cEEEEEEcCCCc-EEEEE-cCCcEEEEecC
Q psy7057         183 CVYQNKAQ--NSFMIPAM-----------SVWAVAILPNSD-IVTGS-SDGIVRVFSAN  226 (557)
Q Consensus       183 ~iwd~~~~--~~~~~~~~-----------~v~~v~~~p~g~-l~sg~-~Dg~I~iwd~~  226 (557)
                      ++||+...  ..+..+..           .+..++|+|+|+ |+.++ .++...||.++
T Consensus       323 ~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~  381 (396)
T 3c5m_A          323 YVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIAD  381 (396)
T ss_dssp             EEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred             EEEecccCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEE
Confidence            99997654  45555543           256788999998 65554 45665666543

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=99.29  E-value=1.8e-10  Score=116.28  Aligned_cols=202  Identities=11%  Similarity=0.060  Sum_probs=139.9

Q ss_pred             ccEEEEEEcCCCc-EEEEECC---Cc--EEEEcCCC--------------CCCCCCCCEEEEEECC--------------
Q psy7057          13 MDVRSLSVTPDGC-ILSASRD---KS--AKLWKPND--------------LSPGAKVNTLLSASWD--------------   58 (557)
Q Consensus        13 ~~V~~l~~spdg~-l~sgs~D---g~--V~iWd~~~--------------~~~~~~~~~l~sgs~D--------------   58 (557)
                      ..+.+++|+|||+ |+.++.+   +.  |.+|++.+              +.++|+++.|+.++.+              
T Consensus        59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~  138 (347)
T 2gop_A           59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKNIRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVP  138 (347)
T ss_dssp             ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESEEEEEEECTTSSEEEEEEECCCC---------CC
T ss_pred             ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCCccceeECCCCCEEEEEEccCCCcCCcEEEcccc
Confidence            4577899999998 7766543   33  77777764              5678899988888743              


Q ss_pred             -------------CeEEEEECCCCeEEEEEcccCCcEEEEEEcCCCEEEEEECCC---------eEEEEeCCCcEEEEEe
Q psy7057          59 -------------MTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADK---------TIKLHSEEGEFLKTLT  116 (557)
Q Consensus        59 -------------g~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~~l~sgs~dg---------~I~vwd~~~~~~~~l~  116 (557)
                                   ..|.+|++.+++.+..+.. . .+..+.|+|++++++++.+.         .|.++| .++ ...+.
T Consensus       139 ~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg~~~~~~~~~~~~~~~~~~~l~~~d-~~~-~~~l~  214 (347)
T 2gop_A          139 AWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDKIVVNVPHREIIPQYFKFWDIYIWE-DGK-EEKMF  214 (347)
T ss_dssp             CC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTEEEEEEECCCSSCCSSCCEEEEEEE-TTE-EEEEE
T ss_pred             eeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCeEEEEEecccccccccccccEEEeC-CCc-eEEec
Confidence                         5789999998887455554 3 77889999999555555442         355556 444 44444


Q ss_pred             CCCCCEEEEEEeCCCe-EEEEECC--------CeEEEEECCCCeEEEEEeCCCCcEEE-EEE-cCCEEEEEeCCCeEEEE
Q psy7057         117 GHTDCVRGLAVLNDTD-FVSCSND--------ASIRVWDSTTGKCVHTMYGHPNFIYS-VAA-HGDLITSGGEDQCVCVY  185 (557)
Q Consensus       117 ~h~~~V~~l~~~~~~~-lvs~s~D--------g~I~vwd~~~~~~~~~~~~h~~~V~~-l~~-~~~~l~s~s~Dg~I~iw  185 (557)
                      .+ ..+.++  +|+|+ ++.++.+        ..|.+||  +++.......|...+.. +.| ++ ++++++.++.+++|
T Consensus       215 ~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~sdg-~~~~~~~~~~~~l~  288 (347)
T 2gop_A          215 EK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKDGK-VYFTLFEEGSVNLY  288 (347)
T ss_dssp             EE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEETTE-EEEEEEETTEEEEE
T ss_pred             cC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEcCc-EEEEEecCCcEEEE
Confidence            44 555554  88876 6665543        4688888  66655444556777876 777 45 78889999999999


Q ss_pred             ECCCC--ceEeeCCccEEEEEEcCCCcEEEEEcCCcE-EEEecC
Q psy7057         186 QNKAQ--NSFMIPAMSVWAVAILPNSDIVTGSSDGIV-RVFSAN  226 (557)
Q Consensus       186 d~~~~--~~~~~~~~~v~~v~~~p~g~l~sg~~Dg~I-~iwd~~  226 (557)
                       ....  ..+..+...|.+++++| .-+++++.++.. +||.++
T Consensus       289 -~~~g~~~~~~~~~~~v~~~~~s~-~~~~~~~~~~~~~~l~~~~  330 (347)
T 2gop_A          289 -IWDGEIKPIAKGRHWIMGFDVDE-IVVYLKETATRLRELFTWD  330 (347)
T ss_dssp             -EESSSEEEEECSSSEEEEEEESS-SEEEEEECSSSCCEEEEES
T ss_pred             -EcCCceEEEecCCCeEEeeeeeC-cEEEEEcCCCChHHheEeC
Confidence             7533  34444566799999999 446677777665 788765

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=99.28  E-value=6.8e-11  Score=130.85  Aligned_cols=222  Identities=14%  Similarity=0.104  Sum_probs=147.5

Q ss_pred             EEeccCcccEE---------EEEEc--CCCcE-EEEEC--CCcEEEEcCC----C-------------------CCCCCC
Q psy7057           6 TALYGHSMDVR---------SLSVT--PDGCI-LSASR--DKSAKLWKPN----D-------------------LSPGAK   48 (557)
Q Consensus         6 ~~l~gH~~~V~---------~l~~s--pdg~l-~sgs~--Dg~V~iWd~~----~-------------------~~~~~~   48 (557)
                      +.|..|...|.         ...|+  |||+. +..+.  +..|.+|++.    .                   ++++|+
T Consensus        61 ~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spD  140 (662)
T 3azo_A           61 ESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPE  140 (662)
T ss_dssp             EESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETT
T ss_pred             ceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCC
Confidence            45666766666         66665  99873 43333  5678888875    3                   335688


Q ss_pred             CCEEEEEECC----------CeEEEEECCC------CeEEEEEc-ccCCcEEEEEEcCCC-EEEEEECC--------CeE
Q psy7057          49 VNTLLSASWD----------MTAKLWCLES------QQCKLTIR-QHEMAVWGVIQLANG-IIVTGCAD--------KTI  102 (557)
Q Consensus        49 ~~~l~sgs~D----------g~i~iwd~~~------~~~~~~l~-~h~~~V~~l~~~~~~-~l~sgs~d--------g~I  102 (557)
                      ++.|++++.+          .+|++|++.+      ++. ..+. .+...+..++|+|+| .|+.++.+        ..|
T Consensus       141 g~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i  219 (662)
T 3azo_A          141 RGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTEL  219 (662)
T ss_dssp             TTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEE
T ss_pred             CCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEE
Confidence            9999998877          5899999987      544 3455 566788889999999 77777755        379


Q ss_pred             EEEeCC--C---cEEEEEeCCCCCEEEEEEeCCCeEE-EEECCC--eEEEEECCCCeEEEEEeCCCCc--------EEEE
Q psy7057         103 KLHSEE--G---EFLKTLTGHTDCVRGLAVLNDTDFV-SCSNDA--SIRVWDSTTGKCVHTMYGHPNF--------IYSV  166 (557)
Q Consensus       103 ~vwd~~--~---~~~~~l~~h~~~V~~l~~~~~~~lv-s~s~Dg--~I~vwd~~~~~~~~~~~~h~~~--------V~~l  166 (557)
                      .+||..  +   .......+|...+..+.|+|+++++ +++.++  .|.+||+.+++.......+...        +.++
T Consensus       220 ~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~  299 (662)
T 3azo_A          220 KTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWF  299 (662)
T ss_dssp             EEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSE
T ss_pred             EEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceE
Confidence            999965  4   3344445567889999999998854 666777  6777777677655433333222        4567


Q ss_pred             EE--cCCEEEEEeCCCeEEEE--ECCCC--ceEeeCCccEEEE-EEcCCCc-EEEEEcCCcEEE--EecCCCC
Q psy7057         167 AA--HGDLITSGGEDQCVCVY--QNKAQ--NSFMIPAMSVWAV-AILPNSD-IVTGSSDGIVRV--FSANPDR  229 (557)
Q Consensus       167 ~~--~~~~l~s~s~Dg~I~iw--d~~~~--~~~~~~~~~v~~v-~~~p~g~-l~sg~~Dg~I~i--wd~~~~~  229 (557)
                      ++  ++.++++++. +.+++|  |....  +.+..+...+..+ ++.++.. +++++.+....+  +++.+++
T Consensus       300 ~~~~~~~~~~~~~~-~~~~l~~~d~~~~~~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~  371 (662)
T 3azo_A          300 APLANGLIAVVHGK-GAAVLGILDPESGELVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGR  371 (662)
T ss_dssp             EECTTSCEEEEEBS-SSCEEEEEETTTTEEEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCC
T ss_pred             eEeCCCEEEEEEEc-CccEEEEEECCCCcEEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence            77  5678888888 999999  55433  4555566667766 4443333 344555554444  4554544

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=99.25  E-value=2.5e-10  Score=110.93  Aligned_cols=230  Identities=10%  Similarity=0.019  Sum_probs=150.2

Q ss_pred             CCCCCCCCEEE-EEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCCEEEEEECCCeEEEEeCCCcEEEEEeC-CCC
Q psy7057          43 LSPGAKVNTLL-SASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKTLTG-HTD  120 (557)
Q Consensus        43 ~~~~~~~~~l~-sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~~~~~~~~l~~-h~~  120 (557)
                      +.+++++..++ +.+.++.|.+|+..+.........+...+.++++.+++.++.+..++.|.+||..+.....+.. ...
T Consensus        29 i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~i~~~d~~~~~~~~~~~~~~~  108 (270)
T 1rwi_B           29 VAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLPFDGLN  108 (270)
T ss_dssp             EEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEETTTEEEEECTTCSCCEECCCCSCS
T ss_pred             eEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcCCCEEEEEeCCCceEeeeecCCcC
Confidence            34455677666 4467899999997665433222233456788999998855545558899999977765554432 336


Q ss_pred             CEEEEEEeCCCeEE-EEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCCceEe---
Q psy7057         121 CVRGLAVLNDTDFV-SCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQNSFM---  194 (557)
Q Consensus       121 ~V~~l~~~~~~~lv-s~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~~~~~---  194 (557)
                      .+.++++.+++.++ +...++.|.+|+..+.............+.++++  +++++++...++.|.+|+........   
T Consensus       109 ~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~  188 (270)
T 1rwi_B          109 YPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPF  188 (270)
T ss_dssp             SEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCC
T ss_pred             CCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecc
Confidence            78999999998755 5556789999986555433322223345677887  56666676678899999976553222   


Q ss_pred             eCCccEEEEEEcCCCcEE-EEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCC
Q psy7057         195 IPAMSVWAVAILPNSDIV-TGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPD  273 (557)
Q Consensus       195 ~~~~~v~~v~~~p~g~l~-sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~  273 (557)
                      .....+.++++.++|.+. +...++.|++|+.........  ..........+...+.. ...++.+.++.|+++++..+
T Consensus       189 ~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~--~~~~~~~p~~i~~~~~g-~l~v~~~~~~~v~~~~~~~~  265 (270)
T 1rwi_B          189 TDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVL--PFTGLNTPLAVAVDSDR-TVYVADRGNDRVVKLTSLEH  265 (270)
T ss_dssp             SSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEEC--CCCSCSCEEEEEECTTC-CEEEEEGGGTEEEEECCCGG
T ss_pred             cCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceee--ccCCCCCceeEEECCCC-CEEEEECCCCEEEEEcCCCc
Confidence            122568899999999855 444578999999876543221  11112345666666554 45688889999999998866


Q ss_pred             hh
Q psy7057         274 RQ  275 (557)
Q Consensus       274 ~~  275 (557)
                      +.
T Consensus       266 ~~  267 (270)
T 1rwi_B          266 HH  267 (270)
T ss_dssp             GS
T ss_pred             cc
Confidence            43

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=99.25  E-value=6.2e-10  Score=109.70  Aligned_cols=191  Identities=15%  Similarity=0.157  Sum_probs=141.6

Q ss_pred             cCCCcEEEEECCCcEEEEcCCC-----------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEccc-CCcE
Q psy7057          21 TPDGCILSASRDKSAKLWKPND-----------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQH-EMAV   82 (557)
Q Consensus        21 spdg~l~sgs~Dg~V~iWd~~~-----------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h-~~~V   82 (557)
                      +|+..|++++.++.|.+||..+                 +...++++.++  +.++.|..||. +++.+..+..+ ...+
T Consensus         3 ~~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~   79 (276)
T 3no2_A            3 SPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEM   79 (276)
T ss_dssp             CCCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEE
T ss_pred             CCCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccc
Confidence            4554588999999999999854                 24456788887  56888999998 88999988865 3578


Q ss_pred             EEEEEcCCC-EEEEEEC-CCeEEEEeCCCcEEEEEeC------CCCCEEEEEEeCCCe-EEEEECCCeEEEEECCCCeEE
Q psy7057          83 WGVIQLANG-IIVTGCA-DKTIKLHSEEGEFLKTLTG------HTDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCV  153 (557)
Q Consensus        83 ~~l~~~~~~-~l~sgs~-dg~I~vwd~~~~~~~~l~~------h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~~  153 (557)
                      .++.+.++| .+++.+. ++.+..++.+|+.+..+..      +......+++.+++. +++.+.++.|..||.. |+.+
T Consensus        80 ~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~  158 (276)
T 3no2_A           80 QTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLL  158 (276)
T ss_dssp             EEEEECTTSCEEEEEESTTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEE
T ss_pred             cccEECCCCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEE
Confidence            899999999 7777776 7788888988988777652      222455567788877 5577789999999987 9999


Q ss_pred             EEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCCce---EeeC------CccEEEEEEcCCCcEEEEEc
Q psy7057         154 HTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQNS---FMIP------AMSVWAVAILPNSDIVTGSS  216 (557)
Q Consensus       154 ~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~~~---~~~~------~~~v~~v~~~p~g~l~sg~~  216 (557)
                      .++..+. ...++..  +++.+++++.++.|..+|..+.+.   +...      ...+..++..++|.++.++.
T Consensus       159 w~~~~~~-~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~  231 (276)
T 3no2_A          159 NSVKLSG-TPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW  231 (276)
T ss_dssp             EEEECSS-CCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred             EEEECCC-CccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence            9987643 3344444  678888888888999999775522   2211      12377888889988555554

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=99.22  E-value=8.5e-10  Score=124.05  Aligned_cols=217  Identities=13%  Similarity=0.078  Sum_probs=145.4

Q ss_pred             CcccEEEEEEcCCCc-EEEEEC-C----CcEEEEcCCC---------------CCCCCCCCEEEEEECCCe---------
Q psy7057          11 HSMDVRSLSVTPDGC-ILSASR-D----KSAKLWKPND---------------LSPGAKVNTLLSASWDMT---------   60 (557)
Q Consensus        11 H~~~V~~l~~spdg~-l~sgs~-D----g~V~iWd~~~---------------~~~~~~~~~l~sgs~Dg~---------   60 (557)
                      |...+.+++|||||+ |+.++. +    .+|++||+.+               ++++++ +.|+.++.++.         
T Consensus       161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~  239 (741)
T 1yr2_A          161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQAL  239 (741)
T ss_dssp             --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------C
T ss_pred             CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccC
Confidence            444788999999998 665443 2    3599999876               568888 89998887664         


Q ss_pred             -----EEEEECCCCe----EEEEEcccCCcEEEEEEcCCC-EEEEEECC-----CeEEEEeCCCc--E-EEEEeCCCCCE
Q psy7057          61 -----AKLWCLESQQ----CKLTIRQHEMAVWGVIQLANG-IIVTGCAD-----KTIKLHSEEGE--F-LKTLTGHTDCV  122 (557)
Q Consensus        61 -----i~iwd~~~~~----~~~~l~~h~~~V~~l~~~~~~-~l~sgs~d-----g~I~vwd~~~~--~-~~~l~~h~~~V  122 (557)
                           |++|++.++.    .+.....+...+..+.|+|+| .|+..+.+     ..|.+||..+.  . ...+..+...+
T Consensus       240 ~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~  319 (741)
T 1yr2_A          240 NYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQ  319 (741)
T ss_dssp             CCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSC
T ss_pred             CCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCce
Confidence                 8899987764    222223344468899999999 66665544     37999995443  3 55666666555


Q ss_pred             EEEEEeCC-CeEEEEEC----CCeEEEEECCCC--eEEEEEeCCCCcEEEEEE-cCCEEEEEeCCCeEEEEE--CCCC--
Q psy7057         123 RGLAVLND-TDFVSCSN----DASIRVWDSTTG--KCVHTMYGHPNFIYSVAA-HGDLITSGGEDQCVCVYQ--NKAQ--  190 (557)
Q Consensus       123 ~~l~~~~~-~~lvs~s~----Dg~I~vwd~~~~--~~~~~~~~h~~~V~~l~~-~~~~l~s~s~Dg~I~iwd--~~~~--  190 (557)
                      ....+ |+ +.|+..+.    ++.|.+||+.++  +....+..+...+..+++ .+.++++...|+..++|.  +...  
T Consensus       320 ~~~~~-~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~~~  398 (741)
T 1yr2_A          320 WDFVD-GVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIAGNRLFASYIHDAKSQVLAFDLDGKPA  398 (741)
T ss_dssp             EEEEE-EETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEEBTEEEEEEEETTEEEEEEEETTSCEE
T ss_pred             EEEEe-ccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCCCCce
Confidence            55544 55 44666665    345999998874  344444455556777777 455677888899877775  3222  


Q ss_pred             ceEeeC-CccEEEEEEcCCCc-EE-EEE---cCCcEEEEecCCCC
Q psy7057         191 NSFMIP-AMSVWAVAILPNSD-IV-TGS---SDGIVRVFSANPDR  229 (557)
Q Consensus       191 ~~~~~~-~~~v~~v~~~p~g~-l~-sg~---~Dg~I~iwd~~~~~  229 (557)
                      +.+..+ ...+..++++|++. ++ +.+   ..++|++||+.+++
T Consensus       399 ~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~  443 (741)
T 1yr2_A          399 GAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK  443 (741)
T ss_dssp             EECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred             eeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence            334333 45688899999987 44 322   35789999987654

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=99.20  E-value=2.4e-08  Score=97.84  Aligned_cols=216  Identities=9%  Similarity=0.024  Sum_probs=149.3

Q ss_pred             cCcccEEEEEEcCCCcEEEEE-CCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEECCCCeEE
Q psy7057          10 GHSMDVRSLSVTPDGCILSAS-RDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCLESQQCK   72 (557)
Q Consensus        10 gH~~~V~~l~~spdg~l~sgs-~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~   72 (557)
                      .+...+.+++++++|.++.+. .++.|..|+...                +..++++..+++...++.|.+|+. +++..
T Consensus        54 ~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~  132 (299)
T 2z2n_A           54 TPDAKVMCLTISSDGEVWFTENAANKIGRITKKGIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIR  132 (299)
T ss_dssp             STTCCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEE
T ss_pred             cccCceeeEEECCCCCEEEeCCCCCeEEEECCCCcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEE
Confidence            345679999999999965554 478899888653                334556777777777889999998 55443


Q ss_pred             EE-EcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcEEEE-EeCCCCCEEEEEEeCCCeEEEEE-CCCeEEEEECC
Q psy7057          73 LT-IRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFLKT-LTGHTDCVRGLAVLNDTDFVSCS-NDASIRVWDST  148 (557)
Q Consensus        73 ~~-l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~~~-l~~h~~~V~~l~~~~~~~lvs~s-~Dg~I~vwd~~  148 (557)
                      .. +..+...+.++++.+++ ++++...++.|..||.+++.... +..+...+.++++.+++.+..+. .++.|.+||. 
T Consensus       133 ~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-  211 (299)
T 2z2n_A          133 EYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITESGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-  211 (299)
T ss_dssp             EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-
T ss_pred             EecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcCCCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-
Confidence            32 33345678999999988 45545557899999986655433 33345678999999988866544 5789999998 


Q ss_pred             CCeEEEE-EeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC-ceEe--eCCccEEEEEEcCCCcEEEEEcCCcEEE
Q psy7057         149 TGKCVHT-MYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ-NSFM--IPAMSVWAVAILPNSDIVTGSSDGIVRV  222 (557)
Q Consensus       149 ~~~~~~~-~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~-~~~~--~~~~~v~~v~~~p~g~l~sg~~Dg~I~i  222 (557)
                      +++.... +..+...+.++++  ++.++++...++.|..||.... ..+.  .....+.++++ +++.+..+...+.|..
T Consensus       212 ~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~-~~g~l~v~~~~~~l~~  290 (299)
T 2z2n_A          212 SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTSNNIIEEYPIQIKSAEPHGICF-DGETIWFAMECDKIGK  290 (299)
T ss_dssp             TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEETTTEEEEEECSSSSCCEEEEEE-CSSCEEEEETTTEEEE
T ss_pred             CCcEEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECCCCceEEEeCCCCCCccceEEe-cCCCEEEEecCCcEEE
Confidence            6664332 2234567889988  4565555557889999997432 2332  22357899999 8888776665677777


Q ss_pred             EecCCC
Q psy7057         223 FSANPD  228 (557)
Q Consensus       223 wd~~~~  228 (557)
                      ++..+.
T Consensus       291 ~~~~~~  296 (299)
T 2z2n_A          291 LTLIKD  296 (299)
T ss_dssp             EEEC--
T ss_pred             EEcCcc
Confidence            776643

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=99.20  E-value=5.1e-08  Score=105.72  Aligned_cols=270  Identities=14%  Similarity=0.089  Sum_probs=178.6

Q ss_pred             EEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCC--C---------------CCCC----CCCCEEEEEEC-CC
Q psy7057           3 KLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPN--D---------------LSPG----AKVNTLLSASW-DM   59 (557)
Q Consensus         3 kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~--~---------------~~~~----~~~~~l~sgs~-Dg   59 (557)
                      ++..++... ..+..+.|+|||+ +++++.|+.|.+||+.  +               +.++    ++++++++++. ++
T Consensus       188 ~v~~~i~~g-~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~~~~  266 (567)
T 1qks_A          188 EIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPP  266 (567)
T ss_dssp             CEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEETT
T ss_pred             eEEEEEeCC-CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCCceeEEccccCCCCCEEEEEEccCC
Confidence            455556533 3567999999998 7788999999999995  3               5666    58888877664 59


Q ss_pred             eEEEEECCCCeEEEEEcc----------c-CCcEEEEEEcCCC--EEEEEECCCeEEEEeCCCc--EEEEEeCCCCCEEE
Q psy7057          60 TAKLWCLESQQCKLTIRQ----------H-EMAVWGVIQLANG--IIVTGCADKTIKLHSEEGE--FLKTLTGHTDCVRG  124 (557)
Q Consensus        60 ~i~iwd~~~~~~~~~l~~----------h-~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~~~~--~~~~l~~h~~~V~~  124 (557)
                      ++.++|..+.+.+.++..          | ...+..+..++++  .+++...+|.|.++|....  .............+
T Consensus       267 ~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d  346 (567)
T 1qks_A          267 QYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHD  346 (567)
T ss_dssp             EEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEE
T ss_pred             eEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccC
Confidence            999999999988877642          2 2267888888876  5666677899999994332  21122234456788


Q ss_pred             EEEeCCCe-EE-EEECCCeEEEEECCCCeEEEEEeC-----CCCcEEEEEE-cCC-EEEEEe-CCCeEEEEECCC-----
Q psy7057         125 LAVLNDTD-FV-SCSNDASIRVWDSTTGKCVHTMYG-----HPNFIYSVAA-HGD-LITSGG-EDQCVCVYQNKA-----  189 (557)
Q Consensus       125 l~~~~~~~-lv-s~s~Dg~I~vwd~~~~~~~~~~~~-----h~~~V~~l~~-~~~-~l~s~s-~Dg~I~iwd~~~-----  189 (557)
                      +.|+|+++ |+ ++..+++|.++|+.+++.+..+.-     |.+.-..+.. ++. .++++. .+++|.++|...     
T Consensus       347 ~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~  426 (567)
T 1qks_A          347 GGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPD  426 (567)
T ss_dssp             EEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTT
T ss_pred             ceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcEEEeCCCCCCeEEEecCCCCCCcc
Confidence            99999988 33 455678999999999998777653     4332222322 333 444443 468999999765     


Q ss_pred             --C---ceEeeCCccEEEEEEcCCCc-EEEEEc-------CCcEEEEecCCC-----Cc----chhHH---HhcccceeE
Q psy7057         190 --Q---NSFMIPAMSVWAVAILPNSD-IVTGSS-------DGIVRVFSANPD-----RQ----AEDAV---QAQYAEEVK  244 (557)
Q Consensus       190 --~---~~~~~~~~~v~~v~~~p~g~-l~sg~~-------Dg~I~iwd~~~~-----~~----~~~~~---~~~~~~~v~  244 (557)
                        .   +++......-..+..+|+++ +.+...       .++|.++|+.+.     ..    .....   +......+.
T Consensus       427 ~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  506 (567)
T 1qks_A          427 NAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVV  506 (567)
T ss_dssp             TBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEE
T ss_pred             ccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceE
Confidence              2   34444333334577899998 544442       459999999866     21    11110   001123456


Q ss_pred             EEeccCCCceeEEEEe----CCCcEEEEecCCC
Q psy7057         245 KLKSANEQEIGGVKVS----DDGIVRVFSANPD  273 (557)
Q Consensus       245 ~l~~~~~~~~~~vs~s----~DG~IrvW~~~~~  273 (557)
                      .+.+.+......+|.-    .++.|.|+|..+.
T Consensus       507 ~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~  539 (567)
T 1qks_A          507 QGEFNKDGTEVWFSVWNGKDQESALVVVDDKTL  539 (567)
T ss_dssp             EEEECTTSSEEEEEEECCTTSCCEEEEEETTTT
T ss_pred             eeeECCCCCEEEEEeecCCCCCCcEEEEECCCc
Confidence            6667776665556643    4789999987654

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=99.20  E-value=2.7e-09  Score=119.26  Aligned_cols=229  Identities=8%  Similarity=-0.022  Sum_probs=149.3

Q ss_pred             CCCCCCCCEEEEEECCC-----eEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCe---------------
Q psy7057          43 LSPGAKVNTLLSASWDM-----TAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKT---------------  101 (557)
Q Consensus        43 ~~~~~~~~~l~sgs~Dg-----~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~---------------  101 (557)
                      ++++|++++|+.++.++     +|++||+.+++.......+ ..+.+++|+|+| .|+.++.++.               
T Consensus       130 ~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~  208 (710)
T 2xdw_A          130 YAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQ  208 (710)
T ss_dssp             EEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCC
T ss_pred             EEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCccccccccccccCCCC
Confidence            56788999998776543     8999999999876533222 225679999998 7888887766               


Q ss_pred             -EEEEeCCCcE---EEEEe--CCCCCEEEEEEeCCCe-EEEEEC-----CCeEEEEECCC------Ce-EEEEEeCCCCc
Q psy7057         102 -IKLHSEEGEF---LKTLT--GHTDCVRGLAVLNDTD-FVSCSN-----DASIRVWDSTT------GK-CVHTMYGHPNF  162 (557)
Q Consensus       102 -I~vwd~~~~~---~~~l~--~h~~~V~~l~~~~~~~-lvs~s~-----Dg~I~vwd~~~------~~-~~~~~~~h~~~  162 (557)
                       |++|+.....   ...+.  .|...+..+.|+|+++ ++.++.     +..|.+||+.+      +. ....+..+...
T Consensus       209 ~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~  288 (710)
T 2xdw_A          209 KLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEG  288 (710)
T ss_dssp             EEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSS
T ss_pred             EEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCc
Confidence             9999953321   22223  3556688999999987 444443     56899999876      43 35566666555


Q ss_pred             EEE-EEEcCCEEEEEeCC----CeEEEEECCCC-----ceEeeCCc--cEEEEEEcCCCc-EEEEEcCCc--EEEEecCC
Q psy7057         163 IYS-VAAHGDLITSGGED----QCVCVYQNKAQ-----NSFMIPAM--SVWAVAILPNSD-IVTGSSDGI--VRVFSANP  227 (557)
Q Consensus       163 V~~-l~~~~~~l~s~s~D----g~I~iwd~~~~-----~~~~~~~~--~v~~v~~~p~g~-l~sg~~Dg~--I~iwd~~~  227 (557)
                      +.. +..+++.|+..+..    ..|.+|++...     +.+..+..  .+..+++++++. +++...|+.  |++|++.+
T Consensus       289 ~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~  368 (710)
T 2xdw_A          289 EYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLAT  368 (710)
T ss_dssp             CEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTT
T ss_pred             EEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCC
Confidence            544 33378876665543    36999997653     45555544  688899997777 667777885  45566644


Q ss_pred             CCcchhHHHhcccceeEEEeccCCCceeEEEEeC---CCcEEEEecCCCh
Q psy7057         228 DRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSD---DGIVRVFSANPDR  274 (557)
Q Consensus       228 ~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~---DG~IrvW~~~~~~  274 (557)
                      +.....  .......+..+...+......++.++   .++|.+|++.+++
T Consensus       369 g~~~~~--l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~  416 (710)
T 2xdw_A          369 GALLKI--FPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE  416 (710)
T ss_dssp             CCEEEE--ECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred             CCEEEe--cCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence            443211  11224456666665555444455443   5789999987653

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=99.19  E-value=8.7e-10  Score=113.00  Aligned_cols=235  Identities=10%  Similarity=0.089  Sum_probs=155.0

Q ss_pred             CCCcEEEEcCCC--------------CCCCCCCCEEEEEEC----------CCeEEEEECCCCeEEEEEccc------CC
Q psy7057          31 RDKSAKLWKPND--------------LSPGAKVNTLLSASW----------DMTAKLWCLESQQCKLTIRQH------EM   80 (557)
Q Consensus        31 ~Dg~V~iWd~~~--------------~~~~~~~~~l~sgs~----------Dg~i~iwd~~~~~~~~~l~~h------~~   80 (557)
                      .|++|.+||..+              +.++++++++++++.          +++|.+||+.+++.+.++...      ..
T Consensus        29 ~d~~v~v~D~~t~~~~~~i~~g~~p~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~  108 (361)
T 2oiz_A           29 TESRVHVYDYTNGKFLGMVPTAFNGHVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLN  108 (361)
T ss_dssp             GGCEEEEEETTTCCEEEEEECCEEEEEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCC
T ss_pred             ccCeEEEEECCCCeEEEEecCCCCCceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCC
Confidence            377999999765              678889999999873          678999999999888877542      24


Q ss_pred             cEEEEEEcCCC-EEEEEEC--CCeEEEEeC-CCcEEEE-EeCCCCCEEEEEEeCCC--eEEEEECCCeEEEEECCC-CeE
Q psy7057          81 AVWGVIQLANG-IIVTGCA--DKTIKLHSE-EGEFLKT-LTGHTDCVRGLAVLNDT--DFVSCSNDASIRVWDSTT-GKC  152 (557)
Q Consensus        81 ~V~~l~~~~~~-~l~sgs~--dg~I~vwd~-~~~~~~~-l~~h~~~V~~l~~~~~~--~lvs~s~Dg~I~vwd~~~-~~~  152 (557)
                      ....++++|+| .|+++..  +++|.+||. +++.+.. +. +.. ...+.+.|++  .+++.+.||.+.+|++.. ++.
T Consensus       109 ~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~-~~~-~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~  186 (361)
T 2oiz_A          109 YDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTA-AAG-CWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKV  186 (361)
T ss_dssp             CGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGG-GTT-EEEEEECTTSSSEEEEEETTSSEEEEEECTTSSE
T ss_pred             CcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEec-CCC-cceeEEcCCCCeeEEEECCCCcEEEEEECCCCcE
Confidence            56679999999 6666653  689999994 5555555 33 322 2335667765  488999999999999765 555


Q ss_pred             EEEE------eCCCCcEE-EEEEcCCEEEEEeCCCeEEEEECCCC--ce---EeeCC----------ccEEEEEEcCCCc
Q psy7057         153 VHTM------YGHPNFIY-SVAAHGDLITSGGEDQCVCVYQNKAQ--NS---FMIPA----------MSVWAVAILPNSD  210 (557)
Q Consensus       153 ~~~~------~~h~~~V~-~l~~~~~~l~s~s~Dg~I~iwd~~~~--~~---~~~~~----------~~v~~v~~~p~g~  210 (557)
                      ....      ..+...+. ....++..++..+.++.+.++|+...  ..   +....          .....++++|++.
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~  266 (361)
T 2oiz_A          187 ASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASG  266 (361)
T ss_dssp             EEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTT
T ss_pred             eeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCC
Confidence            4222      11122221 11235666777778899999997543  11   11111          1112378999977


Q ss_pred             -EEEEEc-----------CCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCC
Q psy7057         211 -IVTGSS-----------DGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPD  273 (557)
Q Consensus       211 -l~sg~~-----------Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~  273 (557)
                       ++++..           .+.|.+||..+.+.........    ...+.+.++.. .+++++. +.|+|||..+.
T Consensus       267 ~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~----p~~ia~spdg~-~l~v~n~-~~v~v~D~~t~  335 (361)
T 2oiz_A          267 RMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD----ALSMTIDQQRN-LMLTLDG-GNVNVYDISQP  335 (361)
T ss_dssp             EEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT----CCEEEEETTTT-EEEEECS-SCEEEEECSSS
T ss_pred             eEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC----eeEEEECCCCC-EEEEeCC-CeEEEEECCCC
Confidence             444432           3489999998876554332221    66777777766 4555555 99999998765

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=99.16  E-value=1.4e-08  Score=100.79  Aligned_cols=219  Identities=10%  Similarity=0.069  Sum_probs=146.8

Q ss_pred             eccCcccEEEEEEcCCCcEEEE--------ECCCcEEEEcCCC--------------------CCCCCCCCEEEEEECCC
Q psy7057           8 LYGHSMDVRSLSVTPDGCILSA--------SRDKSAKLWKPND--------------------LSPGAKVNTLLSASWDM   59 (557)
Q Consensus         8 l~gH~~~V~~l~~spdg~l~sg--------s~Dg~V~iWd~~~--------------------~~~~~~~~~l~sgs~Dg   59 (557)
                      +...-....+++|+++|.|+.+        ..++.|.+|+..+                    +.+++++..|..++...
T Consensus        13 ~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~   92 (314)
T 1pjx_A           13 VTEDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRL   92 (314)
T ss_dssp             EECCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTT
T ss_pred             hhccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCC
Confidence            3444456789999999985544        7789999998644                    22334424555555556


Q ss_pred             eEEEEECCCCeEEEE-Ecc----cCCcEEEEEEcCCC-EEEEEECC---------------CeEEEEeCCCcEEEEEeCC
Q psy7057          60 TAKLWCLESQQCKLT-IRQ----HEMAVWGVIQLANG-IIVTGCAD---------------KTIKLHSEEGEFLKTLTGH  118 (557)
Q Consensus        60 ~i~iwd~~~~~~~~~-l~~----h~~~V~~l~~~~~~-~l~sgs~d---------------g~I~vwd~~~~~~~~l~~h  118 (557)
                      .|.+|+.. ++.... ...    ....+.++++.+++ ++++...+               +.|..++..++.... ..+
T Consensus        93 ~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~-~~~  170 (314)
T 1pjx_A           93 GLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDGQMIQV-DTA  170 (314)
T ss_dssp             EEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTSCEEEE-EEE
T ss_pred             CEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCCCCEEEe-ccC
Confidence            89999988 665432 211    12457899999998 44444333               567777766554333 333


Q ss_pred             CCCEEEEEEe----CCCe-EE-EEECCCeEEEEECC-CCe-----EEEEEeCCC-CcEEEEEE--cCCEEEEEeCCCeEE
Q psy7057         119 TDCVRGLAVL----NDTD-FV-SCSNDASIRVWDST-TGK-----CVHTMYGHP-NFIYSVAA--HGDLITSGGEDQCVC  183 (557)
Q Consensus       119 ~~~V~~l~~~----~~~~-lv-s~s~Dg~I~vwd~~-~~~-----~~~~~~~h~-~~V~~l~~--~~~~l~s~s~Dg~I~  183 (557)
                      ......++++    +++. ++ +.+.++.|.+||+. +++     ....+..+. ..+..+++  ++.++++...++.|.
T Consensus       171 ~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~  250 (314)
T 1pjx_A          171 FQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIE  250 (314)
T ss_dssp             ESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEE
T ss_pred             CCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEE
Confidence            4457889999    9985 44 55567899999976 454     222333343 56788888  567777777889999


Q ss_pred             EEECCCC---ceEeeCCccEEEEEEcCCCc-EEEEE-cCCcEEEEecCCC
Q psy7057         184 VYQNKAQ---NSFMIPAMSVWAVAILPNSD-IVTGS-SDGIVRVFSANPD  228 (557)
Q Consensus       184 iwd~~~~---~~~~~~~~~v~~v~~~p~g~-l~sg~-~Dg~I~iwd~~~~  228 (557)
                      +|+..+.   ..+..+...+.+++++|+++ |++++ .++.|..|+....
T Consensus       251 ~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~  300 (314)
T 1pjx_A          251 VFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN  300 (314)
T ss_dssp             EECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred             EEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence            9997633   45555667899999999998 65554 4678999998643

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=99.15  E-value=2.9e-09  Score=105.33  Aligned_cols=212  Identities=11%  Similarity=0.035  Sum_probs=139.4

Q ss_pred             CCCCCCCC-EEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeC-CCcEEEEEeCC-
Q psy7057          43 LSPGAKVN-TLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSE-EGEFLKTLTGH-  118 (557)
Q Consensus        43 ~~~~~~~~-~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~-~~~~~~~l~~h-  118 (557)
                      +.++++++ .++++..++.|..|+..++  ...+..+...+.++++++++ ++++...++.|.+||. +++........ 
T Consensus        33 ~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~  110 (296)
T 3e5z_A           33 PVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFE  110 (296)
T ss_dssp             EEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEET
T ss_pred             CeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccC
Confidence            33455677 7788888999999999887  56676778889999999999 5555545689999996 66654333221 


Q ss_pred             ---CCCEEEEEEeCCCeEEEE-----E-------------CCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEE
Q psy7057         119 ---TDCVRGLAVLNDTDFVSC-----S-------------NDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITS  175 (557)
Q Consensus       119 ---~~~V~~l~~~~~~~lvs~-----s-------------~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s  175 (557)
                         ...+.+++++|+|.++.+     +             ..+.|..++.. ++ +..+..+......+++  +++.+++
T Consensus       111 ~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~~~~~~~~gi~~s~dg~~lv~  188 (296)
T 3e5z_A          111 GKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-LSAPIRDRVKPNGLAFLPSGNLLVS  188 (296)
T ss_dssp             TEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-EEEEECCCSSEEEEEECTTSCEEEE
T ss_pred             CCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-EEEeecCCCCCccEEECCCCCEEEE
Confidence               234678999999886642     2             13456666654 44 3445556677788998  6777777


Q ss_pred             EeCCCeEEEEECCC-Cc------eEeeCCccEEEEEEcCCCcEEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEec
Q psy7057         176 GGEDQCVCVYQNKA-QN------SFMIPAMSVWAVAILPNSDIVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKS  248 (557)
Q Consensus       176 ~s~Dg~I~iwd~~~-~~------~~~~~~~~v~~v~~~p~g~l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~  248 (557)
                      .+.++.|++|+... ..      .+..+...+..+++.++|.+.+++ ++.|++|+... +.....  ..... +..+.+
T Consensus       189 ~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~-~~~v~~~~~~g-~~~~~~--~~~~~-~~~~~f  263 (296)
T 3e5z_A          189 DTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA-GDGVHVLTPDG-DELGRV--LTPQT-TSNLCF  263 (296)
T ss_dssp             ETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE-TTEEEEECTTS-CEEEEE--ECSSC-CCEEEE
T ss_pred             eCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc-CCeEEEECCCC-CEEEEE--ECCCC-ceeEEE
Confidence            77889999999652 11      121233456789999999976666 88999999863 322111  11222 455555


Q ss_pred             cCCCceeEEEEeCCC
Q psy7057         249 ANEQEIGGVKVSDDG  263 (557)
Q Consensus       249 ~~~~~~~~vs~s~DG  263 (557)
                      ...+...+..++.+|
T Consensus       264 ~~~d~~~L~v~t~~~  278 (296)
T 3e5z_A          264 GGPEGRTLYMTVSTE  278 (296)
T ss_dssp             ESTTSCEEEEEETTE
T ss_pred             ECCCCCEEEEEcCCe
Confidence            333333455555554

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=99.14  E-value=1.9e-08  Score=104.89  Aligned_cols=211  Identities=10%  Similarity=0.082  Sum_probs=147.4

Q ss_pred             ccEEEEEEcCCCcEE-EEECCCcEEEEcCCC--------------CCCCCCCCEEEEEECCC--eEEEEECCCCeEEEEE
Q psy7057          13 MDVRSLSVTPDGCIL-SASRDKSAKLWKPND--------------LSPGAKVNTLLSASWDM--TAKLWCLESQQCKLTI   75 (557)
Q Consensus        13 ~~V~~l~~spdg~l~-sgs~Dg~V~iWd~~~--------------~~~~~~~~~l~sgs~Dg--~i~iwd~~~~~~~~~l   75 (557)
                      .....|+|+++++|+ +...++.|++||..+              +.++++++.|+++..++  .|.+++..++.....+
T Consensus       131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~  210 (409)
T 3hrp_A          131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGKPAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRI  210 (409)
T ss_dssp             CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCBCEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEE
T ss_pred             CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCceeEecCCCcEEEEecCCCceEEEEEcCCCceeEEe
Confidence            467899999999955 555678999999875              44567788888888866  7888888765443344


Q ss_pred             ----cccCCcEEEEEEcC-CCEEEEEECCCeEEEEeCCCcEEEEE-----eCCCCCE-E-EEEEeCC-CeEE-EEECCCe
Q psy7057          76 ----RQHEMAVWGVIQLA-NGIIVTGCADKTIKLHSEEGEFLKTL-----TGHTDCV-R-GLAVLND-TDFV-SCSNDAS  141 (557)
Q Consensus        76 ----~~h~~~V~~l~~~~-~~~l~sgs~dg~I~vwd~~~~~~~~l-----~~h~~~V-~-~l~~~~~-~~lv-s~s~Dg~  141 (557)
                          ......+.+++++| ++.|+.+..++.|+.||..+.....+     .++...- . .++++|+ +.|+ +-+..+.
T Consensus       211 g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~  290 (409)
T 3hrp_A          211 GQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSS  290 (409)
T ss_dssp             EECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTE
T ss_pred             eeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCE
Confidence                22456678899999 66666677788999999654433333     2222222 3 8999994 6644 6667889


Q ss_pred             EEEEECCCCeEEEEEeCCC---------------CcEEEEEE--cCCEEEEEe-CCCeEEEEECCCC--ceEeeC-----
Q psy7057         142 IRVWDSTTGKCVHTMYGHP---------------NFIYSVAA--HGDLITSGG-EDQCVCVYQNKAQ--NSFMIP-----  196 (557)
Q Consensus       142 I~vwd~~~~~~~~~~~~h~---------------~~V~~l~~--~~~~l~s~s-~Dg~I~iwd~~~~--~~~~~~-----  196 (557)
                      |+.|+... + +..+.++.               .....+++  +++++++-+ .+++|+.|+....  ..+.++     
T Consensus       291 I~~~~~~g-~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~~g~~~~~g  368 (409)
T 3hrp_A          291 VYKITPDG-E-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTVAGQVDVAS  368 (409)
T ss_dssp             EEEECTTC-C-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEEEEECTTCBS
T ss_pred             EEEEecCC-C-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEEeCCCCCCC
Confidence            99999653 3 33444432               34678888  567777777 7899999995444  344443     


Q ss_pred             ----------CccEEEEEEcCCCc-EEEEEcCCcEEEEec
Q psy7057         197 ----------AMSVWAVAILPNSD-IVTGSSDGIVRVFSA  225 (557)
Q Consensus       197 ----------~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~  225 (557)
                                -.....+++.+++. +++-..++.|+.+++
T Consensus       369 ~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~  408 (409)
T 3hrp_A          369 QIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV  408 (409)
T ss_dssp             CCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred             cCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence                      13588999999988 555566788888765

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=99.13  E-value=7.5e-08  Score=94.35  Aligned_cols=216  Identities=12%  Similarity=0.082  Sum_probs=150.1

Q ss_pred             ccCcccEEEEEEcCCCcEEEEE-CCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEECCCCeE
Q psy7057           9 YGHSMDVRSLSVTPDGCILSAS-RDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCLESQQC   71 (557)
Q Consensus         9 ~gH~~~V~~l~~spdg~l~sgs-~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~   71 (557)
                      ......+.+|++.++|+|..+. .++.|.+|+...                +..++++..+++...++.|..+|.. ++.
T Consensus        16 ~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~   94 (300)
T 2qc5_A           16 SIPDSGPYGITSSEDGKVWFTQHKANKISSLDQSGRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGF   94 (300)
T ss_dssp             SSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred             CCCCCCcceeeECCCCCEEEEcCCCCeEEEECCCCceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCe
Confidence            3456788999999999966555 578899998763                3344567766666667889999987 554


Q ss_pred             E-EEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcEEEE-EeCCCCCEEEEEEeCCCeEEEE-ECCCeEEEEEC
Q psy7057          72 K-LTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFLKT-LTGHTDCVRGLAVLNDTDFVSC-SNDASIRVWDS  147 (557)
Q Consensus        72 ~-~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~~~-l~~h~~~V~~l~~~~~~~lvs~-s~Dg~I~vwd~  147 (557)
                      . ..+......+.++++.+++ ++++...++.|..++..++.... +......+.++++.+++.+..+ ..++.|..+|.
T Consensus        95 ~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~  174 (300)
T 2qc5_A           95 TEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTADGTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN  174 (300)
T ss_dssp             EEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT
T ss_pred             EEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCCCCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC
Confidence            3 2223245678999999988 55555557899999977665432 2334567899999998886544 45788999997


Q ss_pred             CCCeEEEE-EeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC-ceEe--eCCccEEEEEEcCCCcEEEEE-cCCcE
Q psy7057         148 TTGKCVHT-MYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ-NSFM--IPAMSVWAVAILPNSDIVTGS-SDGIV  220 (557)
Q Consensus       148 ~~~~~~~~-~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~-~~~~--~~~~~v~~v~~~p~g~l~sg~-~Dg~I  220 (557)
                       +++.... ...+...+.++++  ++.++++....+.|.+|+.... ..+.  .....+.++++.++|.+..+. .++.|
T Consensus       175 -~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i  253 (300)
T 2qc5_A          175 -TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITTTGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQI  253 (300)
T ss_dssp             -TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEE
T ss_pred             -CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcCCCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeE
Confidence             5655432 2234456888888  4566666666778999997333 2222  234568899999999865555 46889


Q ss_pred             EEEecC
Q psy7057         221 RVFSAN  226 (557)
Q Consensus       221 ~iwd~~  226 (557)
                      ..|+..
T Consensus       254 ~~~~~~  259 (300)
T 2qc5_A          254 GRITND  259 (300)
T ss_dssp             EEECTT
T ss_pred             EEECCC
Confidence            999874

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=99.11  E-value=1.2e-08  Score=103.01  Aligned_cols=212  Identities=11%  Similarity=0.072  Sum_probs=147.0

Q ss_pred             ccEEEEEEcCCCc-EEEEECCCcEEEEcCCC---------------CCCCCCCCEEEEEE-CCCeEEEEECCCCeEEEEE
Q psy7057          13 MDVRSLSVTPDGC-ILSASRDKSAKLWKPND---------------LSPGAKVNTLLSAS-WDMTAKLWCLESQQCKLTI   75 (557)
Q Consensus        13 ~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~---------------~~~~~~~~~l~sgs-~Dg~i~iwd~~~~~~~~~l   75 (557)
                      ....++++.. ++ +++...+++|.+||..+               +.+++++ .+..+. .++.|.+||+.+++....+
T Consensus        44 ~~~~~i~~~~-~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~p~~i~~~~~g-~lyv~~~~~~~v~~iD~~t~~~~~~i  121 (328)
T 3dsm_A           44 DVAQSMVIRD-GIGWIVVNNSHVIFAIDINTFKEVGRITGFTSPRYIHFLSDE-KAYVTQIWDYRIFIINPKTYEITGYI  121 (328)
T ss_dssp             SCEEEEEEET-TEEEEEEGGGTEEEEEETTTCCEEEEEECCSSEEEEEEEETT-EEEEEEBSCSEEEEEETTTTEEEEEE
T ss_pred             ccceEEEEEC-CEEEEEEcCCCEEEEEECcccEEEEEcCCCCCCcEEEEeCCC-eEEEEECCCCeEEEEECCCCeEEEEE
Confidence            3467787753 45 55666789999999986               3444556 455555 8999999999999888777


Q ss_pred             cccC-----CcEEEEEEcCCCEEEEEE--CCCeEEEEeC-CCcEEEEEeCCCCCEEEEEEeCCCeEEEEEC-C-------
Q psy7057          76 RQHE-----MAVWGVIQLANGIIVTGC--ADKTIKLHSE-EGEFLKTLTGHTDCVRGLAVLNDTDFVSCSN-D-------  139 (557)
Q Consensus        76 ~~h~-----~~V~~l~~~~~~~l~sgs--~dg~I~vwd~-~~~~~~~l~~h~~~V~~l~~~~~~~lvs~s~-D-------  139 (557)
                      ....     .....+++ .++.++.+.  .++.|.++|. +++.+..+.. ......++++++++++.++. +       
T Consensus       122 ~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~-g~~p~~i~~~~dG~l~v~~~~~~~~~~~~  199 (328)
T 3dsm_A          122 ECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELTI-GIQPTSLVMDKYNKMWTITDGGYEGSPYG  199 (328)
T ss_dssp             ECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEEC-SSCBCCCEECTTSEEEEEBCCBCTTCSSC
T ss_pred             EcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEc-CCCccceEEcCCCCEEEEECCCccCCccc
Confidence            5433     14456676 455555554  4889999994 5666666653 33467888999998664443 3       


Q ss_pred             ---CeEEEEECCCCeEEEEEeCC-CCcEEEEEE--cCCEEEEEeCCCeEEEEECCCCceE-----eeCCccEEEEEEcCC
Q psy7057         140 ---ASIRVWDSTTGKCVHTMYGH-PNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQNSF-----MIPAMSVWAVAILPN  208 (557)
Q Consensus       140 ---g~I~vwd~~~~~~~~~~~~h-~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~~~~-----~~~~~~v~~v~~~p~  208 (557)
                         +.|.++|..+++....+... ......+++  +++.|+++..  .|.+||..+....     .........++++|+
T Consensus       200 ~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~  277 (328)
T 3dsm_A          200 YEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPN  277 (328)
T ss_dssp             BCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTT
T ss_pred             cCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCC
Confidence               68999999999888777532 236788888  4677777655  8999997654221     111356899999994


Q ss_pred             -CcEE-EE----EcCCcEEEEecCCCCcc
Q psy7057         209 -SDIV-TG----SSDGIVRVFSANPDRQA  231 (557)
Q Consensus       209 -g~l~-sg----~~Dg~I~iwd~~~~~~~  231 (557)
                       +.+. +.    ..++.|.+|+.. ++..
T Consensus       278 ~g~lyva~~~~y~~~~~V~v~d~~-g~~~  305 (328)
T 3dsm_A          278 NGEVYVADAIDYQQQGIVYRYSPQ-GKLI  305 (328)
T ss_dssp             TCCEEEEECTTSSSEEEEEEECTT-CCEE
T ss_pred             CCeEEEEcccccccCCEEEEECCC-CCEE
Confidence             5554 44    468999999987 5443

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=99.07  E-value=6.1e-08  Score=105.12  Aligned_cols=222  Identities=9%  Similarity=-0.005  Sum_probs=155.0

Q ss_pred             CCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeC---CCcEEEEEeCCCCCEEE
Q psy7057          49 VNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSE---EGEFLKTLTGHTDCVRG  124 (557)
Q Consensus        49 ~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~---~~~~~~~l~~h~~~V~~  124 (557)
                      +..+++...+++|.++|..+++.+.++... ..+..+.++|++ ++++++.|+.|.+||.   +++.+..+... ...+.
T Consensus       167 ~~~~V~~~~~~~V~viD~~t~~v~~~i~~g-~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G-~~P~~  244 (567)
T 1qks_A          167 NLFSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIG-SEARS  244 (567)
T ss_dssp             GEEEEEETTTTEEEEEETTTCCEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECC-SEEEE
T ss_pred             ceEEEEeCCCCeEEEEECCCCeEEEEEeCC-CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecC-CCCce
Confidence            456677778899999999999998888643 356789999999 7888899999999996   66777777653 34789


Q ss_pred             EEEe----CCCe-E-EEEECCCeEEEEECCCCeEEEEEeCC----------CC-cEEEEEE--c-CCEEEEEeCCCeEEE
Q psy7057         125 LAVL----NDTD-F-VSCSNDASIRVWDSTTGKCVHTMYGH----------PN-FIYSVAA--H-GDLITSGGEDQCVCV  184 (557)
Q Consensus       125 l~~~----~~~~-l-vs~s~Dg~I~vwd~~~~~~~~~~~~h----------~~-~V~~l~~--~-~~~l~s~s~Dg~I~i  184 (557)
                      ++++    |+++ + ++...+++|.++|..+.+.+.++...          .. .+..+..  + +.++++...+|.|.+
T Consensus       245 ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~  324 (567)
T 1qks_A          245 IETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILL  324 (567)
T ss_dssp             EEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEE
T ss_pred             eEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEE
Confidence            9999    6886 3 35667799999999999998877521          12 5666666  2 346667778899999


Q ss_pred             EECCCCceE----eeCCccEEEEEEcCCCc-EEE-EEcCCcEEEEecCCCCcchhHHH-h--cccceeEEEeccCCCcee
Q psy7057         185 YQNKAQNSF----MIPAMSVWAVAILPNSD-IVT-GSSDGIVRVFSANPDRQAEDAVQ-A--QYAEEVKKLKSANEQEIG  255 (557)
Q Consensus       185 wd~~~~~~~----~~~~~~v~~v~~~p~g~-l~s-g~~Dg~I~iwd~~~~~~~~~~~~-~--~~~~~v~~l~~~~~~~~~  255 (557)
                      +|......+    .........+.|+|+++ +++ +..++.|.++|..+.+....... .  .|.+.-..+ +.+.....
T Consensus       325 vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v  403 (567)
T 1qks_A          325 VDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHPTFGPV  403 (567)
T ss_dssp             EETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EETTTEEE
T ss_pred             EecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee-ECCCCCcE
Confidence            997654211    12334677899999999 444 44688999999998765432222 1  121111111 23332333


Q ss_pred             EEEEe-CCCcEEEEecCCC
Q psy7057         256 GVKVS-DDGIVRVFSANPD  273 (557)
Q Consensus       256 ~vs~s-~DG~IrvW~~~~~  273 (557)
                      .++.. .+++|.+++..++
T Consensus       404 ~~t~~~g~~~Vsvid~~~~  422 (567)
T 1qks_A          404 WATSHMGDDSVALIGTDPE  422 (567)
T ss_dssp             EEEEBSSSSEEEEEECCTT
T ss_pred             EEeCCCCCCeEEEecCCCC
Confidence            34443 5789999998874

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=99.06  E-value=9.5e-08  Score=94.66  Aligned_cols=211  Identities=12%  Similarity=0.021  Sum_probs=140.5

Q ss_pred             cEEEEEeccCcccEEEEEEcCCC-c-EEEEECCCcEEEEcCCC--------------CCCCCCCCEEEEEECCCeEEEEE
Q psy7057           2 YKLSTALYGHSMDVRSLSVTPDG-C-ILSASRDKSAKLWKPND--------------LSPGAKVNTLLSASWDMTAKLWC   65 (557)
Q Consensus         2 ~kl~~~l~gH~~~V~~l~~spdg-~-l~sgs~Dg~V~iWd~~~--------------~~~~~~~~~l~sgs~Dg~i~iwd   65 (557)
                      .+....+..+..---+..|+|++ . +++...++.|..||..+              +.++++++++++ . +..|.+||
T Consensus         2 ~~~~~~~~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d   79 (297)
T 3g4e_A            2 IKIECVLPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVTMDAPVSSVALRQSGGYVAT-I-GTKFCALN   79 (297)
T ss_dssp             CEEEEEECCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECSSCEEEEEEBTTSSEEEE-E-TTEEEEEE
T ss_pred             ccEEEEeccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEEeCCCceEEEEECCCCCEEEE-E-CCeEEEEE
Confidence            34555566666667789999964 4 45666789999999875              456677885444 4 56899999


Q ss_pred             CCCCeEEEEEcc----cCCcEEEEEEcCCCEEEEEE-C-----------CCeEEEEeCCCcEEEEEeCCCCCEEEEEEeC
Q psy7057          66 LESQQCKLTIRQ----HEMAVWGVIQLANGIIVTGC-A-----------DKTIKLHSEEGEFLKTLTGHTDCVRGLAVLN  129 (557)
Q Consensus        66 ~~~~~~~~~l~~----h~~~V~~l~~~~~~~l~sgs-~-----------dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~  129 (557)
                      .++++.......    ....+..+++.|+|.+..++ .           .+.|..++..+.... +..+......++|+|
T Consensus        80 ~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~-~~~~~~~pngi~~sp  158 (297)
T 3g4e_A           80 WKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKK-YFDQVDISNGLDWSL  158 (297)
T ss_dssp             TTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEE-EEEEESBEEEEEECT
T ss_pred             CCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEE-EeeccccccceEEcC
Confidence            988765433322    13458899999999444443 1           234555555554433 333445578999999


Q ss_pred             CCe-E-EEEECCCeEEEEEC--CCCeEE-----EEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC---ceEee
Q psy7057         130 DTD-F-VSCSNDASIRVWDS--TTGKCV-----HTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ---NSFMI  195 (557)
Q Consensus       130 ~~~-l-vs~s~Dg~I~vwd~--~~~~~~-----~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~---~~~~~  195 (557)
                      +++ + ++.+.++.|.+|++  .++...     ..+..+......+++  +|+++++....+.|..||..+.   ..+..
T Consensus       159 dg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~  238 (297)
T 3g4e_A          159 DHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKL  238 (297)
T ss_dssp             TSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEEC
T ss_pred             CCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEEC
Confidence            986 4 46667889999987  455432     222233456778888  5677777778889999997643   55566


Q ss_pred             CCccEEEEEEc-CCCc-EEEEE
Q psy7057         196 PAMSVWAVAIL-PNSD-IVTGS  215 (557)
Q Consensus       196 ~~~~v~~v~~~-p~g~-l~sg~  215 (557)
                      +...+++++|. |+++ |++++
T Consensus       239 p~~~~t~~~f~g~d~~~L~vt~  260 (297)
T 3g4e_A          239 PVDKTTSCCFGGKNYSEMYVTC  260 (297)
T ss_dssp             SSSBEEEEEEESGGGCEEEEEE
T ss_pred             CCCCceEEEEeCCCCCEEEEEc
Confidence            66789999998 7776 44333

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=99.03  E-value=6.5e-09  Score=115.96  Aligned_cols=225  Identities=9%  Similarity=-0.030  Sum_probs=141.9

Q ss_pred             CCCCCCCCEEE-----EEECCCeEEEEECCCCeEEEEEcccCCcE--EEEEEcCCC-EEEEEECCCe-------------
Q psy7057          43 LSPGAKVNTLL-----SASWDMTAKLWCLESQQCKLTIRQHEMAV--WGVIQLANG-IIVTGCADKT-------------  101 (557)
Q Consensus        43 ~~~~~~~~~l~-----sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V--~~l~~~~~~-~l~sgs~dg~-------------  101 (557)
                      ++++|++++|+     .|+.+.+|++||+.+++.+.  ..+...+  ..++|+|+| .|+.++.|..             
T Consensus       126 ~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~  203 (695)
T 2bkl_A          126 WAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTT  203 (695)
T ss_dssp             EEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCE
T ss_pred             EEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCE
Confidence            56788999988     44455789999999987541  1121122  578999999 8888888776             


Q ss_pred             EEEEeCC-Cc----EEEEEeCCCCCEEEEEEeCCCe-EEEEECCC----eEEEEECCCCeEEEEEeCCCCcEEEEEE-cC
Q psy7057         102 IKLHSEE-GE----FLKTLTGHTDCVRGLAVLNDTD-FVSCSNDA----SIRVWDSTTGKCVHTMYGHPNFIYSVAA-HG  170 (557)
Q Consensus       102 I~vwd~~-~~----~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg----~I~vwd~~~~~~~~~~~~h~~~V~~l~~-~~  170 (557)
                      |++|+.. +.    ++.....|...+.++.++|+|+ ++.++.++    .|.+|+..+++. ..+..+...+....+ ++
T Consensus       204 v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~-~~l~~~~~~~~~~~~~~g  282 (695)
T 2bkl_A          204 IRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDF-RLLVKGVGAKYEVHAWKD  282 (695)
T ss_dssp             EEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSC-EEEEECSSCCEEEEEETT
T ss_pred             EEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCce-EEeecCCCceEEEEecCC
Confidence            9999953 22    3333345667889999999987 55555554    677777655543 344445544455444 66


Q ss_pred             CEEEEEeC----CCeEEEEECCCC-----ceEeeC--CccEEEEEEcCCCc-EEEEEcCCcEEEEecCC-CCcchhHHHh
Q psy7057         171 DLITSGGE----DQCVCVYQNKAQ-----NSFMIP--AMSVWAVAILPNSD-IVTGSSDGIVRVFSANP-DRQAEDAVQA  237 (557)
Q Consensus       171 ~~l~s~s~----Dg~I~iwd~~~~-----~~~~~~--~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~-~~~~~~~~~~  237 (557)
                      . ++..+.    ++.|.+|++.+.     +.+..+  ...+..++++ ++. +++...|+..+||.++. +........ 
T Consensus       283 ~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~-  359 (695)
T 2bkl_A          283 R-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKPVRTVQL-  359 (695)
T ss_dssp             E-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEEEECCC-
T ss_pred             c-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCeeEEecC-
Confidence            6 554443    578999997543     344333  3457888888 555 77888899988887652 221111110 


Q ss_pred             cccceeEEEeccCCCceeEEEEe---CCCcEEEEecCCC
Q psy7057         238 QYAEEVKKLKSANEQEIGGVKVS---DDGIVRVFSANPD  273 (557)
Q Consensus       238 ~~~~~v~~l~~~~~~~~~~vs~s---~DG~IrvW~~~~~  273 (557)
                      .....+..+.+.+......++.+   ..++|++|++.++
T Consensus       360 ~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g  398 (695)
T 2bkl_A          360 PGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTG  398 (695)
T ss_dssp             SSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTC
T ss_pred             CCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCC
Confidence            11334444555554444444444   3578999998764

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=98.99  E-value=1.9e-08  Score=103.43  Aligned_cols=167  Identities=8%  Similarity=-0.010  Sum_probs=122.5

Q ss_pred             cEEEEEEcCCC-EEEEEECCCeEEEEeC---C---------CcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEEEEE
Q psy7057          81 AVWGVIQLANG-IIVTGCADKTIKLHSE---E---------GEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVWD  146 (557)
Q Consensus        81 ~V~~l~~~~~~-~l~sgs~dg~I~vwd~---~---------~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd  146 (557)
                      .+..+++++.. ++++|+.+ .+++|+.   .         -++... ..+.. |+.|+|  ++. |+++ .++.|++||
T Consensus        39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~-~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d  112 (388)
T 1xip_A           39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWE-KEIPD-VIFVCF--HGDQVLVS-TRNALYSLD  112 (388)
T ss_dssp             CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEE-EECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred             cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEE-eeCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence            67889999876 88888887 4555971   1         122122 23666 999999  544 5555 889999999


Q ss_pred             CCCCeEEEEEeCCCCcEEEEEEcCCEEEEEeCCCeEEEEECCCCceEeeCCccEEEEEEcCCCcEEEEEcCCcEEEEecC
Q psy7057         147 STTGKCVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILPNSDIVTGSSDGIVRVFSAN  226 (557)
Q Consensus       147 ~~~~~~~~~~~~h~~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~v~~v~~~p~g~l~sg~~Dg~I~iwd~~  226 (557)
                      +++.........|...+.++.+....+++++.||.|.+||++...... +...|+|++|+|+| ++.|..||++++|+..
T Consensus       113 v~sl~~~~~~~~~~~~v~~i~~~~p~~av~~~dG~L~v~dl~~~~~~~-~~~~Vs~v~WSpkG-~~vg~~dg~i~~~~~~  190 (388)
T 1xip_A          113 LEELSEFRTVTSFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKSTKQ-LAQNVTSFDVTNSQ-LAVLLKDRSFQSFAWR  190 (388)
T ss_dssp             SSSTTCEEEEEECSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEE-EEESEEEEEECSSE-EEEEETTSCEEEEEEE
T ss_pred             chhhhccCccceeecceeeEEecCCCEEEEECCCCEEEEEccCCcccc-ccCCceEEEEcCCc-eEEEEcCCcEEEEcCC
Confidence            987766666777888898888844459999999999999998764433 45689999999999 8889999999999887


Q ss_pred             CCCc---ch---hHHHh---cccceeEEEeccCCCcee
Q psy7057         227 PDRQ---AE---DAVQA---QYAEEVKKLKSANEQEIG  255 (557)
Q Consensus       227 ~~~~---~~---~~~~~---~~~~~v~~l~~~~~~~~~  255 (557)
                      ....   ..   .....   .+...+.++.+.......
T Consensus       191 ~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~fl  228 (388)
T 1xip_A          191 NGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFL  228 (388)
T ss_dssp             TTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEE
T ss_pred             CccccccceecCCcccccccCCCeeEEEEEEecCCeEE
Confidence            6552   11   11122   245778888888765543

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=98.98  E-value=9.4e-09  Score=102.72  Aligned_cols=251  Identities=13%  Similarity=0.009  Sum_probs=170.0

Q ss_pred             CcccEEEEEEcCCCcEEEEECCCcEEEEcCCC-----CC--------CCCCCCEEEEEECCCeEEEEECCCCeEEEEEcc
Q psy7057          11 HSMDVRSLSVTPDGCILSASRDKSAKLWKPND-----LS--------PGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQ   77 (557)
Q Consensus        11 H~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~-----~~--------~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~   77 (557)
                      +...+.++...++|.|+.++.+  |..+|...     ..        ..-....+..++.++.+..+|.. ++.......
T Consensus        58 ~~~~~~~~~~~~~g~l~v~t~~--l~~~d~~g~~~~~~~~~~~~~~~~~~~~~~l~v~t~~~~l~~~d~~-g~~~~~~~~  134 (330)
T 3hxj_A           58 GEIIECRPSIGKDGTIYFGSDK--VYAINPDGTEKWRFDTKKAIVSDFTIFEDILYVTSMDGHLYAINTD-GTEKWRFKT  134 (330)
T ss_dssp             GGEEEECCEETTTTEECCSSCE--EEEECCCGGGGGGSCC-----CCEEEETTEEEEECTTSEEEEECTT-SCEEEEEEC
T ss_pred             CCCcccceEEecCCcEEEecCc--EEEECCCCcEEEEEECCCCcccCceEECCEEEEEecCCEEEEEcCC-CCEEEEEcC
Confidence            3345677788888887776665  88888643     00        00114678888889999999988 777777766


Q ss_pred             cCCcEEEEEEcCCCEEEEEECCCeEEEEeCCCcEEEEEeCCCCCEEEEEEeCCCeEEEEECCCeEEEEECCCCeEEEEEe
Q psy7057          78 HEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMY  157 (557)
Q Consensus        78 h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~~~~~~~  157 (557)
                      +...+.++...+++.++.++.++.|..+|..++.+..+......+.++...+++.+..++  +.|..+| .+++.+..+.
T Consensus       135 ~~~~~~~~~~~~~g~l~vgt~~~~l~~~d~~g~~~~~~~~~~~~~~~~~~d~~g~l~v~t--~~l~~~d-~~g~~~~~~~  211 (330)
T 3hxj_A          135 KKAIYATPIVSEDGTIYVGSNDNYLYAINPDGTEKWRFKTNDAITSAASIGKDGTIYFGS--DKVYAIN-PDGTEKWNFY  211 (330)
T ss_dssp             SSCCCSCCEECTTSCEEEECTTSEEEEECTTSCEEEEEECSSCCCSCCEECTTCCEEEES--SSEEEEC-TTSCEEEEEC
T ss_pred             CCceeeeeEEcCCCEEEEEcCCCEEEEECCCCCEeEEEecCCCceeeeEEcCCCEEEEEe--CEEEEEC-CCCcEEEEEc
Confidence            666667777777888888889999999997777777776666667778887788877777  8899999 7888877777


Q ss_pred             CCCCcEEEEEEcCC-EEEEEeCCCeEEEEECCCC--ceEeeCCccEEEEEEcCCCcEEEEEcCCcEEEEecCCCCcchhH
Q psy7057         158 GHPNFIYSVAAHGD-LITSGGEDQCVCVYQNKAQ--NSFMIPAMSVWAVAILPNSDIVTGSSDGIVRVFSANPDRQAEDA  234 (557)
Q Consensus       158 ~h~~~V~~l~~~~~-~l~s~s~Dg~I~iwd~~~~--~~~~~~~~~v~~v~~~p~g~l~sg~~Dg~I~iwd~~~~~~~~~~  234 (557)
                      .....+.++..+++ .|..++.++.|..++....  ..+......+.++.+.+++.+..++.+|.|..++. +++.....
T Consensus       212 ~~~~~~~~~~~~~~g~l~v~t~~~gl~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~ggl~~~d~-~g~~~~~~  290 (330)
T 3hxj_A          212 AGYWTVTRPAISEDGTIYVTSLDGHLYAINPDGTEKWRFKTGKRIESSPVIGNTDTIYFGSYDGHLYAINP-DGTEKWNF  290 (330)
T ss_dssp             CSSCCCSCCEECTTSCEEEEETTTEEEEECTTSCEEEEEECSSCCCSCCEECTTSCEEEECTTCEEEEECT-TSCEEEEE
T ss_pred             cCCcceeceEECCCCeEEEEcCCCeEEEECCCCCEeEEeeCCCCccccceEcCCCeEEEecCCCCEEEECC-CCcEEEEE
Confidence            66667778887543 6777888888888874333  22233333344566666778999999999999985 33332111


Q ss_pred             HHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCC
Q psy7057         235 VQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANP  272 (557)
Q Consensus       235 ~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~  272 (557)
                      ..  ....+..+.....  ..+..++.+|.+++.....
T Consensus       291 ~~--~~~~~~~~~~d~~--g~l~~gt~~G~~~~~~~~~  324 (330)
T 3hxj_A          291 ET--GSWIIATPVIDEN--GTIYFGTRNGKFYALFNLE  324 (330)
T ss_dssp             EC--SSCCCSCCEECTT--CCEEEECTTSCEEEEEC--
T ss_pred             Ec--CCccccceEEcCC--CEEEEEcCCCeEEEEeccc
Confidence            11  1111222222122  2356788999999887554

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=98.97  E-value=1.8e-07  Score=92.57  Aligned_cols=224  Identities=9%  Similarity=0.026  Sum_probs=143.2

Q ss_pred             CCCCCCEEEE-------EECCCeEEEEECCCCeEEEEEc----ccCCcEEEEEEcCC-CEEEEEECCCeEEEEeCCCcEE
Q psy7057          45 PGAKVNTLLS-------ASWDMTAKLWCLESQQCKLTIR----QHEMAVWGVIQLAN-GIIVTGCADKTIKLHSEEGEFL  112 (557)
Q Consensus        45 ~~~~~~~l~s-------gs~Dg~i~iwd~~~~~~~~~l~----~h~~~V~~l~~~~~-~~l~sgs~dg~I~vwd~~~~~~  112 (557)
                      +++++..+++       +..++.|.+|+..+++......    ++...+.++++.++ +.+..++....|.+||..++..
T Consensus        25 ~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~~l~~~d~~g~~~  104 (314)
T 1pjx_A           25 FDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVVQTDGTFE  104 (314)
T ss_dssp             ECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEEEETTSCEE
T ss_pred             ECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCCCEEEEeCCCCEE
Confidence            3446777777       5778999999988877543222    24567899999999 8766666666899999765543


Q ss_pred             EE-EeC----CCCCEEEEEEeCCCeEEEEE-CC---------------CeEEEEECCCCeEEEEEeCCCCcEEEEEEc--
Q psy7057         113 KT-LTG----HTDCVRGLAVLNDTDFVSCS-ND---------------ASIRVWDSTTGKCVHTMYGHPNFIYSVAAH--  169 (557)
Q Consensus       113 ~~-l~~----h~~~V~~l~~~~~~~lvs~s-~D---------------g~I~vwd~~~~~~~~~~~~h~~~V~~l~~~--  169 (557)
                      .. ...    ....+.++++.+++.++.++ .+               +.|..||.. ++..... .+......++++  
T Consensus       105 ~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~-~~~~~~~~i~~~~~  182 (314)
T 1pjx_A          105 EIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD-TAFQFPNGIAVRHM  182 (314)
T ss_dssp             ECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE-EEESSEEEEEEEEC
T ss_pred             EEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEec-cCCCCcceEEEecc
Confidence            32 221    12358899999998866444 33               567777765 5544332 233345666665  


Q ss_pred             --CC--EEE-EEeCCCeEEEEECC-CCc-----eEee---CC-ccEEEEEEcCCCcEE-EEEcCCcEEEEecCCCCcchh
Q psy7057         170 --GD--LIT-SGGEDQCVCVYQNK-AQN-----SFMI---PA-MSVWAVAILPNSDIV-TGSSDGIVRVFSANPDRQAED  233 (557)
Q Consensus       170 --~~--~l~-s~s~Dg~I~iwd~~-~~~-----~~~~---~~-~~v~~v~~~p~g~l~-sg~~Dg~I~iwd~~~~~~~~~  233 (557)
                        ++  .|+ +...++.|.+|+.. ...     .+..   +. ..+..+++.++|.+. +...++.|.+|+..+++....
T Consensus       183 ~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~  262 (314)
T 1pjx_A          183 NDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMR  262 (314)
T ss_dssp             TTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEE
T ss_pred             cCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEE
Confidence              43  454 44567899999854 221     2222   11 457889999999954 445788999999875443321


Q ss_pred             HHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCC
Q psy7057         234 AVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANP  272 (557)
Q Consensus       234 ~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~  272 (557)
                      .  ......+..+.+.+......++...++.|..|++..
T Consensus       263 ~--~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~  299 (314)
T 1pjx_A          263 I--RCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR  299 (314)
T ss_dssp             E--ECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred             E--eCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence            1  112245666666555544556667778999998764

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=98.96  E-value=6.2e-08  Score=108.00  Aligned_cols=219  Identities=13%  Similarity=0.110  Sum_probs=144.7

Q ss_pred             cCcccEEEEEEcCCCc-EE-EEEC----CCcEEEEcCCC---------------CCCCCCCCEEEEEECCCe--------
Q psy7057          10 GHSMDVRSLSVTPDGC-IL-SASR----DKSAKLWKPND---------------LSPGAKVNTLLSASWDMT--------   60 (557)
Q Consensus        10 gH~~~V~~l~~spdg~-l~-sgs~----Dg~V~iWd~~~---------------~~~~~~~~~l~sgs~Dg~--------   60 (557)
                      +|...+..++|||||+ |+ +.+.    ..+|++||+.+               ++|+ +++.|+.++.+..        
T Consensus       126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~  204 (693)
T 3iuj_A          126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSAR  204 (693)
T ss_dssp             TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC-------
T ss_pred             CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCccccccccc
Confidence            4666788999999998 55 3333    35799999876               5677 8899999888744        


Q ss_pred             -----EEEEECCCCe----EEEEEcc-cCCcEEEEEEcCCC-E-EEEEECC---CeEEEEeCCCc--EEEEEeCCCCCEE
Q psy7057          61 -----AKLWCLESQQ----CKLTIRQ-HEMAVWGVIQLANG-I-IVTGCAD---KTIKLHSEEGE--FLKTLTGHTDCVR  123 (557)
Q Consensus        61 -----i~iwd~~~~~----~~~~l~~-h~~~V~~l~~~~~~-~-l~sgs~d---g~I~vwd~~~~--~~~~l~~h~~~V~  123 (557)
                           |++|++.+..    ++..... |...+.++.++|++ . +++.+.+   ..|.++|....  ....+..+.....
T Consensus       205 ~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~  284 (693)
T 3iuj_A          205 TDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADV  284 (693)
T ss_dssp             CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCE
T ss_pred             CCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceE
Confidence                 9999988764    3333344 55567889999999 3 4444432   57899995433  4566666776666


Q ss_pred             EEEEeCCCeEE-EEECC---CeEEEEECCCCeE--EEEEeCCCCcEEEEEEcCCEEEEEe-CCC--eEEEEECCCC--ce
Q psy7057         124 GLAVLNDTDFV-SCSND---ASIRVWDSTTGKC--VHTMYGHPNFIYSVAAHGDLITSGG-EDQ--CVCVYQNKAQ--NS  192 (557)
Q Consensus       124 ~l~~~~~~~lv-s~s~D---g~I~vwd~~~~~~--~~~~~~h~~~V~~l~~~~~~l~s~s-~Dg--~I~iwd~~~~--~~  192 (557)
                      ....++.+.|+ ++..+   +.|..+|+.++.+  ...+..|...+..++.+++.|+... .++  .|++|++...  ..
T Consensus       285 ~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~~~  364 (693)
T 3iuj_A          285 SLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVLTVHSGSGYLFAEYMVDATARVEQFDYEGKRVRE  364 (693)
T ss_dssp             EEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEETTEEEEEEEETTEEEEEEECTTSCEEEE
T ss_pred             EEEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEEEEEEECCEEEEEEEECCeeEEEEEECCCCeeEE
Confidence            65333345555 44333   6799999987654  2455556554446666888766555 444  6888887644  33


Q ss_pred             EeeC-CccEEEEEEcCCCc-EEEEEcC----CcEEEEecCCCC
Q psy7057         193 FMIP-AMSVWAVAILPNSD-IVTGSSD----GIVRVFSANPDR  229 (557)
Q Consensus       193 ~~~~-~~~v~~v~~~p~g~-l~sg~~D----g~I~iwd~~~~~  229 (557)
                      +..+ ...+..+.+++++. ++....+    ++|+.||+.+++
T Consensus       365 l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~  407 (693)
T 3iuj_A          365 VALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGA  407 (693)
T ss_dssp             ECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCC
T ss_pred             eecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCe
Confidence            3332 24567777888877 5544443    789999987654

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=98.96  E-value=5.8e-07  Score=87.94  Aligned_cols=213  Identities=8%  Similarity=0.012  Sum_probs=145.7

Q ss_pred             cCcccEEEEEEcCCCcEEEEE-CCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEECCCCeEE
Q psy7057          10 GHSMDVRSLSVTPDGCILSAS-RDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCLESQQCK   72 (557)
Q Consensus        10 gH~~~V~~l~~spdg~l~sgs-~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~   72 (557)
                      .+...+.++++.++|.++.+. .++.|..||...                +..++++..+++...++.|..++.. ++..
T Consensus        59 ~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~  137 (300)
T 2qc5_A           59 TPDAKVMCLIVSSLGDIWFTENGANKIGKLSKKGGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIY  137 (300)
T ss_dssp             STTCCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEE
T ss_pred             CCCCcceeEEECCCCCEEEEecCCCeEEEECCCCCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEE
Confidence            344678999999999966554 478898887654                3344567777776668899999987 5544


Q ss_pred             E-EEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcEEEE-EeCCCCCEEEEEEeCCCeEEEEE-CCCeEEEEECC
Q psy7057          73 L-TIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFLKT-LTGHTDCVRGLAVLNDTDFVSCS-NDASIRVWDST  148 (557)
Q Consensus        73 ~-~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~~~-l~~h~~~V~~l~~~~~~~lvs~s-~Dg~I~vwd~~  148 (557)
                      . .+......+.++++.+++ ++++...++.|..++.++..... +..+...+.++++.+++.+..+. ..+.|.+||. 
T Consensus       138 ~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-  216 (300)
T 2qc5_A          138 EYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITNTGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-  216 (300)
T ss_dssp             EEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-
T ss_pred             EccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECCCCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-
Confidence            2 233345678999999988 45555557889999986665432 22345678999999988866554 4668999997 


Q ss_pred             CCeEEEE-EeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC-ceEee--CCccEEEEEEcCCCcEEEEEcCCcEEE
Q psy7057         149 TGKCVHT-MYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ-NSFMI--PAMSVWAVAILPNSDIVTGSSDGIVRV  222 (557)
Q Consensus       149 ~~~~~~~-~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~-~~~~~--~~~~v~~v~~~p~g~l~sg~~Dg~I~i  222 (557)
                      +++.... +..+...+.++++  ++.++++...++.|..|+.... ..+..  ....+.++++.++|.+..++.. .|..
T Consensus       217 ~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~-~i~~  295 (300)
T 2qc5_A          217 TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITNDNTIQEYQLQTENAEPHGITFGKDGSVWFALKC-KIGK  295 (300)
T ss_dssp             TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTTSCEEEEECCSTTCCCCCEEECTTSCEEEECSS-EEEE
T ss_pred             CCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECCCCcEEEEECCccCCccceeEeCCCCCEEEEccC-ceEE
Confidence            5554433 2334567888888  4565666556789999997433 33322  2346788999999997766664 6666


Q ss_pred             Eec
Q psy7057         223 FSA  225 (557)
Q Consensus       223 wd~  225 (557)
                      ++.
T Consensus       296 ~~p  298 (300)
T 2qc5_A          296 LNL  298 (300)
T ss_dssp             EEE
T ss_pred             eCC
Confidence            654

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=98.94  E-value=1.3e-07  Score=98.37  Aligned_cols=225  Identities=8%  Similarity=-0.036  Sum_probs=141.8

Q ss_pred             CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCC--eEEEEeCCC-cEEEEE---
Q psy7057          43 LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADK--TIKLHSEEG-EFLKTL---  115 (557)
Q Consensus        43 ~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg--~I~vwd~~~-~~~~~l---  115 (557)
                      ++++++++++++...++.|++||+.++......... .... +++++++ .|+++..++  .|.+++..+ .....+   
T Consensus       136 la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~-~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~  213 (409)
T 3hrp_A          136 IAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGF-KGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQL  213 (409)
T ss_dssp             EEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETC-CBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEEC
T ss_pred             EEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccC-CCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeec
Confidence            566677877777777899999999887766555443 3333 8999988 777777765  788888433 222333   


Q ss_pred             eC-CCCCEEEEEEeC-CCeEEEEECCCeEEEEECCCCeEEEE----EeCCCCcE-E-EEEEc---CCEEEEEeCCCeEEE
Q psy7057         116 TG-HTDCVRGLAVLN-DTDFVSCSNDASIRVWDSTTGKCVHT----MYGHPNFI-Y-SVAAH---GDLITSGGEDQCVCV  184 (557)
Q Consensus       116 ~~-h~~~V~~l~~~~-~~~lvs~s~Dg~I~vwd~~~~~~~~~----~~~h~~~V-~-~l~~~---~~~l~s~s~Dg~I~i  184 (557)
                      .. ....+.+++++| ++.|+.+..++.|+.||..++.....    ..++...- . .++++   +.++++-...+.|+.
T Consensus       214 ~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~  293 (409)
T 3hrp_A          214 GSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYK  293 (409)
T ss_dssp             CTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEE
T ss_pred             cchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEE
Confidence            12 456788999999 67777777889999999887764322    12222222 2 77873   335556667889999


Q ss_pred             EECCCC-ceEeeCC---------------ccEEEEEEcCCCcE-EEEE-cCCcEEEEecCCCCcchhHHH---hc-----
Q psy7057         185 YQNKAQ-NSFMIPA---------------MSVWAVAILPNSDI-VTGS-SDGIVRVFSANPDRQAEDAVQ---AQ-----  238 (557)
Q Consensus       185 wd~~~~-~~~~~~~---------------~~v~~v~~~p~g~l-~sg~-~Dg~I~iwd~~~~~~~~~~~~---~~-----  238 (557)
                      |+.... ..+.+..               .....+++.|+|.| ++-. .++.|+.|+...+........   ..     
T Consensus       294 ~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~~g~~~~~g~~~g~  373 (409)
T 3hrp_A          294 ITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTVAGQVDVASQIDGT  373 (409)
T ss_dssp             ECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEEEEECTTCBSCCCBS
T ss_pred             EecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEEeCCCCCCCcCCCC
Confidence            986543 3333322               34789999999994 4555 688999999655543211110   00     


Q ss_pred             ----ccceeEEEeccCCCceeEEEEeCCCcEEEEec
Q psy7057         239 ----YAEEVKKLKSANEQEIGGVKVSDDGIVRVFSA  270 (557)
Q Consensus       239 ----~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~  270 (557)
                          .......++..+. ....++-..++.||.+++
T Consensus       374 ~~~~~~~~P~giavd~~-g~lyVad~~n~~Ir~i~~  408 (409)
T 3hrp_A          374 PLEATFNYPYDICYDGE-GGYWIAEAWGKAIRKYAV  408 (409)
T ss_dssp             TTTCCBSSEEEEEECSS-SEEEEEESTTCEEEEEEE
T ss_pred             hhceEeCCceEEEEcCC-CCEEEEECCCCeEEEEEe
Confidence                0122344444444 344555566666666654

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=98.93  E-value=1.8e-08  Score=103.53  Aligned_cols=127  Identities=16%  Similarity=0.103  Sum_probs=97.5

Q ss_pred             cCCcEEEEEEcCCCEEEEEECCCeEEEEeC-CCcEEEEEeCCCCCEEEEEEeCCCeEEEEECCCeEEEEECCCCeEEEEE
Q psy7057          78 HEMAVWGVIQLANGIIVTGCADKTIKLHSE-EGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTM  156 (557)
Q Consensus        78 h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~-~~~~~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~~~~~~  156 (557)
                      +.. |..++| .+..|+++ .++.|++||. +.........|...+.++.+.+.. +++++.||.|.+||+.++....  
T Consensus        87 lp~-V~~l~f-d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p~-~av~~~dG~L~v~dl~~~~~~~--  160 (388)
T 1xip_A           87 IPD-VIFVCF-HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNNT-LVILNSVNDLSALDLRTKSTKQ--  160 (388)
T ss_dssp             CTT-EEEEEE-ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSSE-EEEEETTSEEEEEETTTCCEEE--
T ss_pred             CCC-eeEEEE-CCCEEEEE-cCCcEEEEEchhhhccCccceeecceeeEEecCCC-EEEEECCCCEEEEEccCCcccc--
Confidence            556 999999 33477777 8899999993 333344556677889888877553 8899999999999999887653  


Q ss_pred             eCCCCcEEEEEEcCCEEEEEeCCCeEEEEECCCCc-----eE------e---eCCccEEEEEEcCCCcEE
Q psy7057         157 YGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQN-----SF------M---IPAMSVWAVAILPNSDIV  212 (557)
Q Consensus       157 ~~h~~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~~~-----~~------~---~~~~~v~~v~~~p~g~l~  212 (557)
                        +...|+|++|+++-++.|..||++++|+.....     .+      .   .+...|.+|+|.+++.++
T Consensus       161 --~~~~Vs~v~WSpkG~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~fl  228 (388)
T 1xip_A          161 --LAQNVTSFDVTNSQLAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFL  228 (388)
T ss_dssp             --EEESEEEEEECSSEEEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEE
T ss_pred             --ccCCceEEEEcCCceEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEE
Confidence              456899999977668999999999999855432     23      1   256789999999999833

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=98.93  E-value=3.9e-07  Score=91.66  Aligned_cols=198  Identities=11%  Similarity=0.041  Sum_probs=129.0

Q ss_pred             cEEEEEEcCCC-c-EEEEECCCcEEEEcCCC--------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcc
Q psy7057          14 DVRSLSVTPDG-C-ILSASRDKSAKLWKPND--------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQ   77 (557)
Q Consensus        14 ~V~~l~~spdg-~-l~sgs~Dg~V~iWd~~~--------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~   77 (557)
                      -..+.+|+|++ . +++...++.|..|+..+              +.+.+++.++++ +. ..|.+||..+++.......
T Consensus        50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~~v~~i~~~~dg~l~v~-~~-~gl~~~d~~~g~~~~~~~~  127 (326)
T 2ghs_A           50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKTVHALPFMGSALAKISDSKQLIA-SD-DGLFLRDTATGVLTLHAEL  127 (326)
T ss_dssp             BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEECSSCEEEEEEEETTEEEEE-ET-TEEEEEETTTCCEEEEECS
T ss_pred             CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEEECCCcceEEEEeCCCeEEEE-EC-CCEEEEECCCCcEEEEeeC
Confidence            45678999975 4 55666788999998765              334455665554 44 4599999988775433221


Q ss_pred             ----cCCcEEEEEEcCCCEEEEEEC-------CCeEEEEeCCCcEEEEEeCCCCCEEEEEEeCCCe-E-EEEECCCeEEE
Q psy7057          78 ----HEMAVWGVIQLANGIIVTGCA-------DKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTD-F-VSCSNDASIRV  144 (557)
Q Consensus        78 ----h~~~V~~l~~~~~~~l~sgs~-------dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~~~-l-vs~s~Dg~I~v  144 (557)
                          ....+.++++.++|.++.++.       .+.|..++ +++.. .+..+......++|+|++. + ++.+.++.|.+
T Consensus       128 ~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~-~g~~~-~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~  205 (326)
T 2ghs_A          128 ESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA-KGKVT-KLFADISIPNSICFSPDGTTGYFVDTKVNRLMR  205 (326)
T ss_dssp             STTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE-TTEEE-EEEEEESSEEEEEECTTSCEEEEEETTTCEEEE
T ss_pred             CCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe-CCcEE-EeeCCCcccCCeEEcCCCCEEEEEECCCCEEEE
Confidence                124688999999994444432       24566666 55433 3333334578999999986 4 35556789999


Q ss_pred             EECC--CC-e-----EEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC--ceEeeCCccEEEEEEc-CCCc-
Q psy7057         145 WDST--TG-K-----CVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ--NSFMIPAMSVWAVAIL-PNSD-  210 (557)
Q Consensus       145 wd~~--~~-~-----~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~--~~~~~~~~~v~~v~~~-p~g~-  210 (557)
                      ||+.  ++ +     ....+.........+++  ++.++++...++.|.+|+....  ..+..+...+.+++|. |++. 
T Consensus       206 ~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~g~~~~~i~~~~~~~~~~af~g~d~~~  285 (326)
T 2ghs_A          206 VPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTDGNHIARYEVPGKQTTCPAFIGPDASR  285 (326)
T ss_dssp             EEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTTCCEEEEEECSCSBEEEEEEESTTSCE
T ss_pred             EEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCCCCEEEEEECCCCCcEEEEEecCCCCE
Confidence            9975  55 3     22233334456677888  5666666667789999997433  4555566679999998 7876 


Q ss_pred             EEEEE
Q psy7057         211 IVTGS  215 (557)
Q Consensus       211 l~sg~  215 (557)
                      |++++
T Consensus       286 L~vt~  290 (326)
T 2ghs_A          286 LLVTS  290 (326)
T ss_dssp             EEEEE
T ss_pred             EEEEe
Confidence            54444

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=98.91  E-value=3.3e-07  Score=93.68  Aligned_cols=240  Identities=13%  Similarity=0.098  Sum_probs=155.8

Q ss_pred             CCCcEEEEECCCcEEEEcCCC--------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcE-----
Q psy7057          22 PDGCILSASRDKSAKLWKPND--------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAV-----   82 (557)
Q Consensus        22 pdg~l~sgs~Dg~V~iWd~~~--------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V-----   82 (557)
                      .++.++.++.++.|..+|..+              ..+...+..++.++.++.+..+|..+++.+..........     
T Consensus       102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~  181 (376)
T 3q7m_A          102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGE  181 (376)
T ss_dssp             ETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEEETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCC
T ss_pred             eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCC
Confidence            456788899999999999875              1111235678889999999999999999887776432211     


Q ss_pred             EEEEEcCCCEEEEEECCCeEEEEe-CCCcEEEEEeCCCCC----------EEEEEEeCCCeEEEEECCCeEEEEECCCCe
Q psy7057          83 WGVIQLANGIIVTGCADKTIKLHS-EEGEFLKTLTGHTDC----------VRGLAVLNDTDFVSCSNDASIRVWDSTTGK  151 (557)
Q Consensus        83 ~~l~~~~~~~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~----------V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~  151 (557)
                      ..... .++.++.++.++.+..+| .+++.+.........          +.+.....++.++.++.++.+..+|..+++
T Consensus       182 ~~~~~-~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~  260 (376)
T 3q7m_A          182 SAPTT-AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQ  260 (376)
T ss_dssp             CCCEE-ETTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCC
T ss_pred             CCcEE-ECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCc
Confidence            11111 256788889999999999 577777665432110          111111124677888889999999999999


Q ss_pred             EEEEEeCCCCcEEEEEEcCCEEEEEeCCCeEEEEECCCCceEe-eC---CccEEEEEEcCCCcEEEEEcCCcEEEEecCC
Q psy7057         152 CVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQNSFM-IP---AMSVWAVAILPNSDIVTGSSDGIVRVFSANP  227 (557)
Q Consensus       152 ~~~~~~~h~~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~~~~~~-~~---~~~v~~v~~~p~g~l~sg~~Dg~I~iwd~~~  227 (557)
                      .+.....  .....+..++..++.++.++.|..+|..+.+.+- ..   ...+..... .++.+++++.+|.|+++|..+
T Consensus       261 ~~w~~~~--~~~~~~~~~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~-~~~~l~v~~~~g~l~~~d~~t  337 (376)
T 3q7m_A          261 IMWKREL--GSVNDFIVDGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL-YNGNLVVGDSEGYLHWINVED  337 (376)
T ss_dssp             EEEEECC--CCEEEEEEETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE-ETTEEEEECTTSEEEEEETTT
T ss_pred             EEeeccC--CCCCCceEECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE-ECCEEEEEeCCCeEEEEECCC
Confidence            8876652  3355666678889999999999999987663322 11   112222222 245688999999999999988


Q ss_pred             CCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEe
Q psy7057         228 DRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFS  269 (557)
Q Consensus       228 ~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~  269 (557)
                      ++........  ...+......  ....++.++.||.|..|+
T Consensus       338 G~~~~~~~~~--~~~~~~~~~~--~~~~l~v~~~~G~l~~~~  375 (376)
T 3q7m_A          338 GRFVAQQKVD--SSGFQTEPVA--ADGKLLIQAKDGTVYSIT  375 (376)
T ss_dssp             CCEEEEEECC--TTCBCSCCEE--ETTEEEEEBTTSCEEEEE
T ss_pred             CcEEEEEecC--CCcceeCCEE--ECCEEEEEeCCCEEEEEe
Confidence            7654222110  0111111111  122467788999999886

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=98.88  E-value=1.2e-07  Score=106.51  Aligned_cols=228  Identities=13%  Similarity=0.056  Sum_probs=140.5

Q ss_pred             CCCCCCCCEEEEEECC-----CeEEEEECCCCeEEEEEcccCCcEEEEEEcCCCEEEEEECCCe--------------EE
Q psy7057          43 LSPGAKVNTLLSASWD-----MTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKT--------------IK  103 (557)
Q Consensus        43 ~~~~~~~~~l~sgs~D-----g~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~~l~sgs~dg~--------------I~  103 (557)
                      ++++|++++|+.++.+     .+|++||+.+++.+... .+...+..++|+|+..|+.++.++.              |+
T Consensus       168 ~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~-~~~~~~~~~~wspD~~l~~~~~~~~~~~~~~~~~~~~~~v~  246 (741)
T 1yr2_A          168 WAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADE-LKWVKFSGLAWLGNDALLYSRFAEPKEGQAFQALNYNQTVW  246 (741)
T ss_dssp             EEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEE-EEEEESCCCEESTTSEEEEEECCCC--------CCCCCEEE
T ss_pred             EEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCcc-CCCceeccEEEECCCEEEEEEecCcccccccccCCCCCEEE
Confidence            5678899999887654     46999999998865431 1222235788999876666666554              88


Q ss_pred             EEeCC-Cc--EEEEEe--CCCCCEEEEEEeCCCe-EEEEECC-----CeEEEEECCCC--eEEEEEeCCCCcEEEE-EEc
Q psy7057         104 LHSEE-GE--FLKTLT--GHTDCVRGLAVLNDTD-FVSCSND-----ASIRVWDSTTG--KCVHTMYGHPNFIYSV-AAH  169 (557)
Q Consensus       104 vwd~~-~~--~~~~l~--~h~~~V~~l~~~~~~~-lvs~s~D-----g~I~vwd~~~~--~~~~~~~~h~~~V~~l-~~~  169 (557)
                      +|+.. +.  ....+.  .+...+.++.|+|+|+ ++..+.+     ..|.+||+.++  ++...+..+...+... ..+
T Consensus       247 ~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~d  326 (741)
T 1yr2_A          247 LHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFVDGV  326 (741)
T ss_dssp             EEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEEEEE
T ss_pred             EEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEEecc
Confidence            88843 22  122232  3444688999999987 5544433     48999998876  3145555554444433 348


Q ss_pred             CCEEEEEeCC----CeEEEEECCCC----ceE-eeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCC-CCcchhHHHhc
Q psy7057         170 GDLITSGGED----QCVCVYQNKAQ----NSF-MIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANP-DRQAEDAVQAQ  238 (557)
Q Consensus       170 ~~~l~s~s~D----g~I~iwd~~~~----~~~-~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~-~~~~~~~~~~~  238 (557)
                      ++.|+..+.+    +.|.+|++...    +.+ ..+...+..+++. ++. +++...|+..+||.++. +........ .
T Consensus       327 g~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~-~  404 (741)
T 1yr2_A          327 GDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSL-P  404 (741)
T ss_dssp             TTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBC-S
T ss_pred             CCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccC-C
Confidence            8887777754    45999997652    333 3334456677777 444 67888899888886642 222111111 1


Q ss_pred             ccceeEEEeccCCCceeEEEEe---CCCcEEEEecCCC
Q psy7057         239 YAEEVKKLKSANEQEIGGVKVS---DDGIVRVFSANPD  273 (557)
Q Consensus       239 ~~~~v~~l~~~~~~~~~~vs~s---~DG~IrvW~~~~~  273 (557)
                      ....+..+...+......++.+   ..++|.+|++.++
T Consensus       405 ~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg  442 (741)
T 1yr2_A          405 GIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATA  442 (741)
T ss_dssp             SSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTT
T ss_pred             CCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCC
Confidence            1344555655554443444443   3578999998764

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=98.86  E-value=4.6e-07  Score=92.66  Aligned_cols=246  Identities=8%  Similarity=0.003  Sum_probs=158.8

Q ss_pred             CCcEEEEECCCcEEEEcCCC--------CC----------------CCCCCCEEEEEECCCeEEEEECCCCeEEEEEccc
Q psy7057          23 DGCILSASRDKSAKLWKPND--------LS----------------PGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQH   78 (557)
Q Consensus        23 dg~l~sgs~Dg~V~iWd~~~--------~~----------------~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h   78 (557)
                      ++.+++++.++.|..+|..+        +.                +...+..++.++.++.|..+|..+++.+......
T Consensus        53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~  132 (376)
T 3q7m_A           53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVA  132 (376)
T ss_dssp             TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECS
T ss_pred             CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeCC
Confidence            45688888888999998865        11                0112467888999999999999999988777644


Q ss_pred             CCcEEEEEEcCCCEEEEEECCCeEEEEe-CCCcEEEEEeCCCCCE-----EEEEEeCCCeEEEEECCCeEEEEECCCCeE
Q psy7057          79 EMAVWGVIQLANGIIVTGCADKTIKLHS-EEGEFLKTLTGHTDCV-----RGLAVLNDTDFVSCSNDASIRVWDSTTGKC  152 (557)
Q Consensus        79 ~~~V~~l~~~~~~~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V-----~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~~  152 (557)
                      ......... .++.++.++.++.+..+| .+++.+..........     ...... ++.++.++.++.|..+|..+++.
T Consensus       133 ~~~~~~p~~-~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~-~~~v~~g~~~g~l~~~d~~tG~~  210 (376)
T 3q7m_A          133 GEALSRPVV-SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA-FGAAVVGGDNGRVSAVLMEQGQM  210 (376)
T ss_dssp             SCCCSCCEE-ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE-TTEEEECCTTTEEEEEETTTCCE
T ss_pred             CceEcCCEE-ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE-CCEEEEEcCCCEEEEEECCCCcE
Confidence            322111122 256888899999999999 5788777765432211     122222 56788888899999999999998


Q ss_pred             EEEEeCCCCc----------E-EEEEEcCCEEEEEeCCCeEEEEECCCCceE-eeCCccEEEEEEcCCCcEEEEEcCCcE
Q psy7057         153 VHTMYGHPNF----------I-YSVAAHGDLITSGGEDQCVCVYQNKAQNSF-MIPAMSVWAVAILPNSDIVTGSSDGIV  220 (557)
Q Consensus       153 ~~~~~~h~~~----------V-~~l~~~~~~l~s~s~Dg~I~iwd~~~~~~~-~~~~~~v~~v~~~p~g~l~sg~~Dg~I  220 (557)
                      +.........          + ......+..++.++.++.+..+|..+.+.+ .........+... ++.++.++.++.|
T Consensus       211 ~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~-~~~l~~~~~~g~l  289 (376)
T 3q7m_A          211 IWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIVD-GNRIYLVDQNDRV  289 (376)
T ss_dssp             EEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECCCCEEEEEEE-TTEEEEEETTCCE
T ss_pred             EEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccCCCCCCceEE-CCEEEEEcCCCeE
Confidence            8776532110          1 111235677888889999999998766332 2333344444443 4558888899999


Q ss_pred             EEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCChh
Q psy7057         221 RVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQ  275 (557)
Q Consensus       221 ~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~~~  275 (557)
                      ..+|..+++..-....... ........   ....++.++.+|.|.+++..+++.
T Consensus       290 ~~~d~~tG~~~w~~~~~~~-~~~~~~~~---~~~~l~v~~~~g~l~~~d~~tG~~  340 (376)
T 3q7m_A          290 MALTIDGGVTLWTQSDLLH-RLLTSPVL---YNGNLVVGDSEGYLHWINVEDGRF  340 (376)
T ss_dssp             EEEETTTCCEEEEECTTTT-SCCCCCEE---ETTEEEEECTTSEEEEEETTTCCE
T ss_pred             EEEECCCCcEEEeecccCC-CcccCCEE---ECCEEEEEeCCCeEEEEECCCCcE
Confidence            9999988765421110000 00111111   122467788899999999877643

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=98.82  E-value=5.1e-06  Score=85.24  Aligned_cols=222  Identities=13%  Similarity=0.046  Sum_probs=142.3

Q ss_pred             cEEEEEeccCcccEEEEEEcCCCc-EEEEE----------CCCcEEEEcCCC-----------------------CCCCC
Q psy7057           2 YKLSTALYGHSMDVRSLSVTPDGC-ILSAS----------RDKSAKLWKPND-----------------------LSPGA   47 (557)
Q Consensus         2 ~kl~~~l~gH~~~V~~l~~spdg~-l~sgs----------~Dg~V~iWd~~~-----------------------~~~~~   47 (557)
                      .++..++..-..+  .++++|||+ |+.+.          .++.|.+||..+                       +.++|
T Consensus        57 ~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~sp  134 (373)
T 2mad_H           57 GSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTP  134 (373)
T ss_pred             CeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECC
Confidence            3455556544444  899999998 55553          367899999865                       24677


Q ss_pred             CCCEEEEEEC--CCeEEEEECCCCeEEEE-EcccCCcEEEEEEcCCC--EEEEEECCCeEEEEeCCCcEEEEEe-----C
Q psy7057          48 KVNTLLSASW--DMTAKLWCLESQQCKLT-IRQHEMAVWGVIQLANG--IIVTGCADKTIKLHSEEGEFLKTLT-----G  117 (557)
Q Consensus        48 ~~~~l~sgs~--Dg~i~iwd~~~~~~~~~-l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~~~~~~~~l~-----~  117 (557)
                      ++++|++++.  +.+|.++| .+++.+.+ +.. ..   |+.+.|.+  .+++.+.||.+.+++.+++......     .
T Consensus       135 DG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~-~~---~~~~~~~~~~~~~~~~~dg~~~~vd~~g~~~~~~~~~~~~~  209 (373)
T 2mad_H          135 NNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSS-PT---CYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLT  209 (373)
T ss_pred             CCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCC-Cc---eEEEEeCCCceEEEEcCCCCEEEEECCCcEEEEEecccccc
Confidence            8999998875  47899999 99988877 542 22   24444544  6777888999999988554442221     1


Q ss_pred             CCCCE-EEEEEeCC-CeEEEEECCCeEEEEECCCCe--EEEEEeCC----------CCcEEEEEE--cCCEEEEEeC---
Q psy7057         118 HTDCV-RGLAVLND-TDFVSCSNDASIRVWDSTTGK--CVHTMYGH----------PNFIYSVAA--HGDLITSGGE---  178 (557)
Q Consensus       118 h~~~V-~~l~~~~~-~~lvs~s~Dg~I~vwd~~~~~--~~~~~~~h----------~~~V~~l~~--~~~~l~s~s~---  178 (557)
                      ...++ ....+.++ +.++..+..+.+.+.|+.+..  .+..+.-.          ......+.+  +++.++++..   
T Consensus       210 ~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~  289 (373)
T 2mad_H          210 AAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQS  289 (373)
T ss_pred             CCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCC
Confidence            11221 22334444 444544467899999986542  22333211          122233444  6666666543   


Q ss_pred             -------CCeEEEEECCCCc---eEeeCCccEEEEEEcCCCc--EEEEE-cCCcEEEEecCCCCcc
Q psy7057         179 -------DQCVCVYQNKAQN---SFMIPAMSVWAVAILPNSD--IVTGS-SDGIVRVFSANPDRQA  231 (557)
Q Consensus       179 -------Dg~I~iwd~~~~~---~~~~~~~~v~~v~~~p~g~--l~sg~-~Dg~I~iwd~~~~~~~  231 (557)
                             .+.|.++|..+.+   ++. .....++++|+|+|+  ++++. .++.|.++|..+.+..
T Consensus       290 ~~~~~~~~~~V~VID~~t~~vv~~i~-~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv  354 (373)
T 2mad_H          290 AWKLHAAAKEVTSVTGLVGQTSSQIS-LGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQD  354 (373)
T ss_pred             cccccCCCCeEEEEECCCCEEEEEEE-CCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEE
Confidence                   3579999987763   332 233689999999998  55555 4899999999887654

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=98.82  E-value=6e-07  Score=91.92  Aligned_cols=226  Identities=15%  Similarity=0.097  Sum_probs=147.0

Q ss_pred             cEEEEEeccCcccEEEEEEcCCCc-EEEEE----------CCCcEEEEcCCC-----------------------CCCCC
Q psy7057           2 YKLSTALYGHSMDVRSLSVTPDGC-ILSAS----------RDKSAKLWKPND-----------------------LSPGA   47 (557)
Q Consensus         2 ~kl~~~l~gH~~~V~~l~~spdg~-l~sgs----------~Dg~V~iWd~~~-----------------------~~~~~   47 (557)
                      +++..++..-..+  .++++|||+ ++.++          .++.|.+||..+                       +.+++
T Consensus        69 ~~v~~~I~vG~~P--~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~sp  146 (386)
T 3sjl_D           69 GRVIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTP  146 (386)
T ss_dssp             TEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECT
T ss_pred             CeEEEEEECCCCC--cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcC
Confidence            4566666654455  499999998 65554          467899999876                       24567


Q ss_pred             CCCEEEEEEC--CCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEeCC--CcEEEEEeCCC--
Q psy7057          48 KVNTLLSASW--DMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHSEE--GEFLKTLTGHT--  119 (557)
Q Consensus        48 ~~~~l~sgs~--Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~~--~~~~~~l~~h~--  119 (557)
                      ++++++++..  +++|.++|+.+++.+.++....  . ... .|.+  .+++.+.||.+.+.+..  ++.......+.  
T Consensus       147 DGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g--~-~~~-~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~  222 (386)
T 3sjl_D          147 DGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD--C-YHI-FPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHP  222 (386)
T ss_dssp             TSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--E-EEE-EEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSC
T ss_pred             CCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC--c-cee-ecCCCceeEEECCCCCEEEEECCCCCeEEEeecceecc
Confidence            8999888874  6899999999999998885322  1 222 3433  67788999998888842  44433222121  


Q ss_pred             --CCEE-EEEEe-CCCeEEEEECCCeEEEEECCCCe--EEEEEe------------CCCCcEEEEEEcCCEEEEEeC---
Q psy7057         120 --DCVR-GLAVL-NDTDFVSCSNDASIRVWDSTTGK--CVHTMY------------GHPNFIYSVAAHGDLITSGGE---  178 (557)
Q Consensus       120 --~~V~-~l~~~-~~~~lvs~s~Dg~I~vwd~~~~~--~~~~~~------------~h~~~V~~l~~~~~~l~s~s~---  178 (557)
                        ..+. ...|. ++++++..+.+|+|.+.|+.+..  .+..+.            .......++..+++.++....   
T Consensus       223 ~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~  302 (386)
T 3sjl_D          223 EDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRD  302 (386)
T ss_dssp             TTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECC
T ss_pred             ccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEecccc
Confidence              2222 13443 67887767778999999987653  333332            111122333335666655432   


Q ss_pred             -------CCeEEEEECCCCceEee--CCccEEEEEEcCCCc--EEEE-EcCCcEEEEecCCCCcchh
Q psy7057         179 -------DQCVCVYQNKAQNSFMI--PAMSVWAVAILPNSD--IVTG-SSDGIVRVFSANPDRQAED  233 (557)
Q Consensus       179 -------Dg~I~iwd~~~~~~~~~--~~~~v~~v~~~p~g~--l~sg-~~Dg~I~iwd~~~~~~~~~  233 (557)
                             ...|.+.|+.+.+.+..  ....+++|+++++++  |+++ ..++.|.++|..+.+....
T Consensus       303 ~~~hk~~~~~V~viD~~t~kv~~~i~vg~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~  369 (386)
T 3sjl_D          303 EWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRS  369 (386)
T ss_dssp             TTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEE
T ss_pred             ccccCCCCCEEEEEECCCCeEEEEEECCCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEE
Confidence                   25799999887733322  224788999999986  5554 4589999999988775533

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=98.81  E-value=1.7e-07  Score=93.38  Aligned_cols=201  Identities=13%  Similarity=0.030  Sum_probs=147.7

Q ss_pred             CCcEEEEECCCcEEEEcCCC---------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEE
Q psy7057          23 DGCILSASRDKSAKLWKPND---------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQ   87 (557)
Q Consensus        23 dg~l~sgs~Dg~V~iWd~~~---------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~   87 (557)
                      ++.|+.++.++.|..+|...               +...+ ...+..++.++.+..+|.. ++....+......+.++..
T Consensus       107 ~~~l~v~t~~~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~-~g~l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~  184 (330)
T 3hxj_A          107 EDILYVTSMDGHLYAINTDGTEKWRFKTKKAIYATPIVSE-DGTIYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASI  184 (330)
T ss_dssp             TTEEEEECTTSEEEEECTTSCEEEEEECSSCCCSCCEECT-TSCEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEE
T ss_pred             CCEEEEEecCCEEEEEcCCCCEEEEEcCCCceeeeeEEcC-CCEEEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEE
Confidence            66788888889999888763               11122 3457778888999999988 7777777666666777777


Q ss_pred             cCCCEEEEEECCCeEEEEeCCCcEEEEEeCCCCCEEEEEEeCCCeEEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEE
Q psy7057          88 LANGIIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVA  167 (557)
Q Consensus        88 ~~~~~l~sgs~dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~  167 (557)
                      .+++.+..++  +.+..+|.+++.+.........+.++...+++.+..++.++.|..+| .+++.+..+......+.++.
T Consensus       185 d~~g~l~v~t--~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~~gl~~~~-~~g~~~~~~~~~~~~~~~~~  261 (330)
T 3hxj_A          185 GKDGTIYFGS--DKVYAINPDGTEKWNFYAGYWTVTRPAISEDGTIYVTSLDGHLYAIN-PDGTEKWRFKTGKRIESSPV  261 (330)
T ss_dssp             CTTCCEEEES--SSEEEECTTSCEEEEECCSSCCCSCCEECTTSCEEEEETTTEEEEEC-TTSCEEEEEECSSCCCSCCE
T ss_pred             cCCCEEEEEe--CEEEEECCCCcEEEEEccCCcceeceEECCCCeEEEEcCCCeEEEEC-CCCCEeEEeeCCCCccccce
Confidence            7778666666  88899997777777777666778888888888888898888999998 46777766665544444555


Q ss_pred             Ec-CCEEEEEeCCCeEEEEECCCC--ceEeeCCccEEEEEEcCCCcEEEEEcCCcEEEEecCCC
Q psy7057         168 AH-GDLITSGGEDQCVCVYQNKAQ--NSFMIPAMSVWAVAILPNSDIVTGSSDGIVRVFSANPD  228 (557)
Q Consensus       168 ~~-~~~l~s~s~Dg~I~iwd~~~~--~~~~~~~~~v~~v~~~p~g~l~sg~~Dg~I~iwd~~~~  228 (557)
                      .+ +..|..++.++.|..+|....  ..+......+.++...+++.+..++.+|.+++......
T Consensus       262 ~~~~g~l~v~t~~ggl~~~d~~g~~~~~~~~~~~~~~~~~~d~~g~l~~gt~~G~~~~~~~~~~  325 (330)
T 3hxj_A          262 IGNTDTIYFGSYDGHLYAINPDGTEKWNFETGSWIIATPVIDENGTIYFGTRNGKFYALFNLEH  325 (330)
T ss_dssp             ECTTSCEEEECTTCEEEEECTTSCEEEEEECSSCCCSCCEECTTCCEEEECTTSCEEEEEC---
T ss_pred             EcCCCeEEEecCCCCEEEECCCCcEEEEEEcCCccccceEEcCCCEEEEEcCCCeEEEEecccc
Confidence            54 557888889989999995322  23333445567777878888999999999999876543

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=98.79  E-value=5.9e-06  Score=84.74  Aligned_cols=248  Identities=12%  Similarity=0.030  Sum_probs=154.7

Q ss_pred             EEcCCCc-EEEEEC--CC---cEEEEcCCC--------------CCCCCCCCEEEEEE----------CCCeEEEEECCC
Q psy7057          19 SVTPDGC-ILSASR--DK---SAKLWKPND--------------LSPGAKVNTLLSAS----------WDMTAKLWCLES   68 (557)
Q Consensus        19 ~~spdg~-l~sgs~--Dg---~V~iWd~~~--------------~~~~~~~~~l~sgs----------~Dg~i~iwd~~~   68 (557)
                      ...|+++ ++.+..  ..   +|.++|..+              +.+++++++++.+.          .++.|.+||+.+
T Consensus        27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t  106 (373)
T 2mad_H           27 APGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLPNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVT  106 (373)
T ss_pred             cCCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCCCeEECCCCCEEEEEeccccccccCCCCCeEEEEECCC
Confidence            3446776 444432  22   889999876              67788899998886          367899999998


Q ss_pred             CeEEEEEccc-------CCcEEEEEEcCCC-EEEEEEC--CCeEEEEeCCC-cEEEE-EeCCCCCEEEEEEeCCC--eEE
Q psy7057          69 QQCKLTIRQH-------EMAVWGVIQLANG-IIVTGCA--DKTIKLHSEEG-EFLKT-LTGHTDCVRGLAVLNDT--DFV  134 (557)
Q Consensus        69 ~~~~~~l~~h-------~~~V~~l~~~~~~-~l~sgs~--dg~I~vwd~~~-~~~~~-l~~h~~~V~~l~~~~~~--~lv  134 (557)
                      .+.+.++...       ......++++|+| .|+.++.  ++.|.++| .. +.+.. +. ....   +.+.|.+  .++
T Consensus       107 ~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~-~~~~---~~~~~~~~~~~~  181 (373)
T 2mad_H          107 FLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLS-SPTC---YHIHPGAPSTFY  181 (373)
T ss_pred             CcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcC-CCce---EEEEeCCCceEE
Confidence            8877766432       1234578999999 6666653  57899999 54 44444 32 2222   3444553  377


Q ss_pred             EEECCCeEEEEECCCCeEEEEEe-----CCCCcE-EEEEE--cCCEEEEEeCCCeEEEEECCCC--c---eEeeC-----
Q psy7057         135 SCSNDASIRVWDSTTGKCVHTMY-----GHPNFI-YSVAA--HGDLITSGGEDQCVCVYQNKAQ--N---SFMIP-----  196 (557)
Q Consensus       135 s~s~Dg~I~vwd~~~~~~~~~~~-----~h~~~V-~~l~~--~~~~l~s~s~Dg~I~iwd~~~~--~---~~~~~-----  196 (557)
                      +.+.||.+.++|. +++.+....     .....+ ....+  ++..++..+..+.+.+.|+...  .   .+...     
T Consensus       182 ~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~  260 (373)
T 2mad_H          182 LLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRK  260 (373)
T ss_pred             EEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCccc
Confidence            8889999999999 887764322     111121 11222  3444333346788999987533  1   11110     


Q ss_pred             -----CccEEEEEEcCCCc-EEEEEc----------CCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEe
Q psy7057         197 -----AMSVWAVAILPNSD-IVTGSS----------DGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVS  260 (557)
Q Consensus       197 -----~~~v~~v~~~p~g~-l~sg~~----------Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s  260 (557)
                           ......++++|++. +.++..          .+.|.++|..+.+........   .....+.+.++....++++.
T Consensus       261 ~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g---~~p~~i~~s~Dg~~~l~v~~  337 (373)
T 2mad_H          261 ADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLG---HDVDAISVAQDGGPDLYALS  337 (373)
T ss_pred             ccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECC---CCcCeEEECCCCCeEEEEEc
Confidence                 12244478899887 544432          357999999887664333222   23556667777663455555


Q ss_pred             -CCCcEEEEecCCChh
Q psy7057         261 -DDGIVRVFSANPDRQ  275 (557)
Q Consensus       261 -~DG~IrvW~~~~~~~  275 (557)
                       .++.|.|+|..+.+.
T Consensus       338 ~~~~~V~ViD~~t~~v  353 (373)
T 2mad_H          338 AGTEVLHIYDAGAGDQ  353 (373)
T ss_pred             CCCCeEEEEECCCCCE
Confidence             689999999886543

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=98.74  E-value=1.3e-09  Score=111.99  Aligned_cols=177  Identities=15%  Similarity=0.087  Sum_probs=101.9

Q ss_pred             CCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeC-CCcEEEEEeCCCC-CEE-
Q psy7057          48 KVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSE-EGEFLKTLTGHTD-CVR-  123 (557)
Q Consensus        48 ~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~-~~~~~~~l~~h~~-~V~-  123 (557)
                      .+..+++++.|+.|+.||..+|+.+.++..  ..+.+..+..++ .+++++.|+.|+.||. +|+.+..+..+.. .+. 
T Consensus         8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~   85 (369)
T 2hz6_A            8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA   85 (369)
T ss_dssp             CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred             eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence            478899999999999999999999888876  344444445566 7777789999999995 6776666543321 110 


Q ss_pred             EEEEeCCCeEEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEEcCCEEEEEeCCCeEEEEECCCCc---eEeeCCccE
Q psy7057         124 GLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQN---SFMIPAMSV  200 (557)
Q Consensus       124 ~l~~~~~~~lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~~~---~~~~~~~~v  200 (557)
                      +..+..++.+++++.|+.|+.||..+|+.+.++..+.. + ..+.++..+++++.|+.|+.||.++.+   .+...  ..
T Consensus        86 sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~-~-~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~--~~  161 (369)
T 2hz6_A           86 SPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA-D-SLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYF--DY  161 (369)
T ss_dssp             CSCC-----CCCCEEEEEEEEECCC------------------------EEEEEEEEEEECCCSSSSSCCCEEEEE--EE
T ss_pred             CceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCCc-c-cccccCCEEEEEecCCEEEEEECCCCCEEEeEecc--cc
Confidence            11111345677888899999999999999887765542 1 222367788899999999999976652   22111  11


Q ss_pred             EEEEEcCC----CcEEEEEcCCcEEEEecCCCCc
Q psy7057         201 WAVAILPN----SDIVTGSSDGIVRVFSANPDRQ  230 (557)
Q Consensus       201 ~~v~~~p~----g~l~sg~~Dg~I~iwd~~~~~~  230 (557)
                      ...++.++    +.+++++.||.|+.||..+++.
T Consensus       162 ~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~  195 (369)
T 2hz6_A          162 AASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDV  195 (369)
T ss_dssp             CCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCE
T ss_pred             cCccccCCccccceEEEECCCCEEEEEECCCCcE
Confidence            22333332    4588899999999999987764

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=98.69  E-value=1.5e-06  Score=86.00  Aligned_cols=157  Identities=11%  Similarity=0.075  Sum_probs=108.7

Q ss_pred             CcccEEEEEEcCCCcEEEEECCCcEEEEcCCC--------------------CCCCCCCCEEEEEECC---------CeE
Q psy7057          11 HSMDVRSLSVTPDGCILSASRDKSAKLWKPND--------------------LSPGAKVNTLLSASWD---------MTA   61 (557)
Q Consensus        11 H~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~--------------------~~~~~~~~~l~sgs~D---------g~i   61 (557)
                      +...+.+++++++|+|+.+. ++.|.+||..+                    +.+++++.++++....         ..-
T Consensus        52 ~~~~~~~i~~~~dG~l~v~~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~  130 (297)
T 3g4e_A           52 MDAPVSSVALRQSGGYVATI-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQG  130 (297)
T ss_dssp             CSSCEEEEEEBTTSSEEEEE-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCE
T ss_pred             CCCceEEEEECCCCCEEEEE-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCc
Confidence            35679999999999977666 56788888764                    3455667766554321         234


Q ss_pred             EEEECCC-CeEEEEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEeC---CCcE-----EEEEeCCCCCEEEEEEeCC
Q psy7057          62 KLWCLES-QQCKLTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHSE---EGEF-----LKTLTGHTDCVRGLAVLND  130 (557)
Q Consensus        62 ~iwd~~~-~~~~~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~---~~~~-----~~~l~~h~~~V~~l~~~~~  130 (557)
                      .||.+.. ++.. .+..+......++|+|++  ++++.+.++.|.+|+.   ++..     ...+..+...+..+++.++
T Consensus       131 ~l~~~d~~g~~~-~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~  209 (297)
T 3g4e_A          131 ALYSLFPDHHVK-KYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAE  209 (297)
T ss_dssp             EEEEECTTSCEE-EEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTT
T ss_pred             EEEEEECCCCEE-EEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCC
Confidence            5555443 3332 233344567889999988  4466667889999983   3432     1222334456889999999


Q ss_pred             CeEE-EEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEEc
Q psy7057         131 TDFV-SCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAH  169 (557)
Q Consensus       131 ~~lv-s~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~~  169 (557)
                      +.+. +....+.|..||..+++.+..+..+...+++++|.
T Consensus       210 G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~  249 (297)
T 3g4e_A          210 GKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFG  249 (297)
T ss_dssp             SCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEE
T ss_pred             CCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEe
Confidence            8855 55567889999998899999998887889999994

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=98.69  E-value=9.2e-07  Score=87.78  Aligned_cols=209  Identities=12%  Similarity=0.100  Sum_probs=131.8

Q ss_pred             EeccCcccEEEEEEcCCCc--EEEEECCCcEEEEcCCC--------------CCCCCCCCEEEEEECCCeEEEEECCCCe
Q psy7057           7 ALYGHSMDVRSLSVTPDGC--ILSASRDKSAKLWKPND--------------LSPGAKVNTLLSASWDMTAKLWCLESQQ   70 (557)
Q Consensus         7 ~l~gH~~~V~~l~~spdg~--l~sgs~Dg~V~iWd~~~--------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~   70 (557)
                      .|..+.......+|+|+|+  +++...++.|..|+...              +.++++++++++...++.|.+|+.. ++
T Consensus        39 ~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g~~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~  117 (305)
T 3dr2_A           39 TLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDGTVDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQ  117 (305)
T ss_dssp             EEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETTSCEEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred             EEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCCCCEEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CC
Confidence            3444556778899999987  55777789999998743              5566778766655566889999976 55


Q ss_pred             EEEEEccc----CCcEEEEEEcCCC-EEEE----EEC-------------CCeEEEEeC-CCcEEEEEeCCCCCEEEEEE
Q psy7057          71 CKLTIRQH----EMAVWGVIQLANG-IIVT----GCA-------------DKTIKLHSE-EGEFLKTLTGHTDCVRGLAV  127 (557)
Q Consensus        71 ~~~~l~~h----~~~V~~l~~~~~~-~l~s----gs~-------------dg~I~vwd~-~~~~~~~l~~h~~~V~~l~~  127 (557)
                      ........    ...+.++++.++| ++++    |..             .+.|..+|. +++.... . .......++|
T Consensus       118 ~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~-~-~~~~p~gl~~  195 (305)
T 3dr2_A          118 AHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRM-A-DLDHPNGLAF  195 (305)
T ss_dssp             EEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEE-E-EESSEEEEEE
T ss_pred             EEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEE-e-cCCCCcceEE
Confidence            33222111    2346679999999 4444    332             245777775 4443332 2 3456788999


Q ss_pred             eCCCe-EEEEECC------CeEEEEECCCCeE--EEEEe-CCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC--ceE
Q psy7057         128 LNDTD-FVSCSND------ASIRVWDSTTGKC--VHTMY-GHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ--NSF  193 (557)
Q Consensus       128 ~~~~~-lvs~s~D------g~I~vwd~~~~~~--~~~~~-~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~--~~~  193 (557)
                      +|++. ++.+...      +.|.+|++..+..  ...+. ........+++  +|+ |.+++.+ .|.+|+....  ..+
T Consensus       196 spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~-lwv~~~~-gv~~~~~~g~~~~~~  273 (305)
T 3dr2_A          196 SPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGW-LWSSSGT-GVCVFDSDGQLLGHI  273 (305)
T ss_dssp             CTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSC-EEECCSS-EEEEECTTSCEEEEE
T ss_pred             cCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCC-EEEecCC-cEEEECCCCCEEEEE
Confidence            99986 5555544      7899999875541  11121 12233445666  566 4444444 4999996443  444


Q ss_pred             eeCCccEEEEEEcCCCc-EEEEEcCCcEE
Q psy7057         194 MIPAMSVWAVAILPNSD-IVTGSSDGIVR  221 (557)
Q Consensus       194 ~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~  221 (557)
                      ..+. .+.+++|.|+++ |..++.++..+
T Consensus       274 ~~~~-~~~~~~f~~d~~~L~it~~~~l~~  301 (305)
T 3dr2_A          274 PTPG-TASNCTFDQAQQRLFITGGPCLWM  301 (305)
T ss_dssp             ECSS-CCCEEEECTTSCEEEEEETTEEEE
T ss_pred             ECCC-ceeEEEEeCCCCEEEEEcCCeEEE
Confidence            4444 588999998887 66666664333

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=98.62  E-value=5.2e-06  Score=84.95  Aligned_cols=250  Identities=13%  Similarity=0.060  Sum_probs=160.5

Q ss_pred             EEEcCCCc-EEEEEC-----CCcEEEEcCCC--------------CCCCCCCCEEEEEE----------CCCeEEEEECC
Q psy7057          18 LSVTPDGC-ILSASR-----DKSAKLWKPND--------------LSPGAKVNTLLSAS----------WDMTAKLWCLE   67 (557)
Q Consensus        18 l~~spdg~-l~sgs~-----Dg~V~iWd~~~--------------~~~~~~~~~l~sgs----------~Dg~i~iwd~~   67 (557)
                      ....|++. ++....     ++.|.+.|..+              +.++++++++++++          .++.|.+||..
T Consensus        38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~  117 (386)
T 3sjl_D           38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPV  117 (386)
T ss_dssp             CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT
T ss_pred             eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCCcEEECCCCCEEEEEcccccccccCCCCCEEEEEECC
Confidence            34568887 555543     68999999877              56678899887776          36789999999


Q ss_pred             CCeEEEEEcccC-------CcEEEEEEcCCC-EEEEEEC--CCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCC--CeEE
Q psy7057          68 SQQCKLTIRQHE-------MAVWGVIQLANG-IIVTGCA--DKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLND--TDFV  134 (557)
Q Consensus        68 ~~~~~~~l~~h~-------~~V~~l~~~~~~-~l~sgs~--dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~--~~lv  134 (557)
                      +.+.+.++....       .....++++|+| .++.+..  ++.|.++| .+++.+.++... ..  . .+.|.  ..|+
T Consensus       118 t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~-g~--~-~~~P~g~~~~~  193 (386)
T 3sjl_D          118 TLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVP-DC--Y-HIFPTAPDTFF  193 (386)
T ss_dssp             TCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECC-SE--E-EEEEEETTEEE
T ss_pred             CCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECC-Cc--c-eeecCCCceeE
Confidence            999888875321       234568999999 6666653  68999999 566667776532 21  1 22233  3477


Q ss_pred             EEECCCeEEEEECCC-CeEEEEEeCC----CCcEE-EEEE---cCCEEEEEeCCCeEEEEECCCC-----ceEeeC----
Q psy7057         135 SCSNDASIRVWDSTT-GKCVHTMYGH----PNFIY-SVAA---HGDLITSGGEDQCVCVYQNKAQ-----NSFMIP----  196 (557)
Q Consensus       135 s~s~Dg~I~vwd~~~-~~~~~~~~~h----~~~V~-~l~~---~~~~l~s~s~Dg~I~iwd~~~~-----~~~~~~----  196 (557)
                      +.+.||++.+.++.+ ++...+...+    ...+. ...|   +|++++ .+.+|.|++.|....     ..+...    
T Consensus       194 ~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~  272 (386)
T 3sjl_D          194 MHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAE  272 (386)
T ss_dssp             EEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHH
T ss_pred             EECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceecccccc
Confidence            889999999999876 5653322211    11221 1244   444444 666899999997543     112100    


Q ss_pred             ------CccEEEEEEcCCCc-EEEEEc----------CCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeE-EE
Q psy7057         197 ------AMSVWAVAILPNSD-IVTGSS----------DGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGG-VK  258 (557)
Q Consensus       197 ------~~~v~~v~~~p~g~-l~sg~~----------Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~-vs  258 (557)
                            ......+++++++. ++....          .+.|.++|..+.+........   .....+...++....+ ++
T Consensus       273 ~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg---~~~~~lavs~D~~~~ly~t  349 (386)
T 3sjl_D          273 RADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG---HEIDSINVSQDEKPLLYAL  349 (386)
T ss_dssp             HHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE---EEECEEEECSSSSCEEEEE
T ss_pred             ccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECC---CCcceEEECCCCCeEEEEE
Confidence                  11233477788877 444322          256999999888766443332   2456677777765344 55


Q ss_pred             EeCCCcEEEEecCCChh
Q psy7057         259 VSDDGIVRVFSANPDRQ  275 (557)
Q Consensus       259 ~s~DG~IrvW~~~~~~~  275 (557)
                      ...++.|.|+|..+.+.
T Consensus       350 n~~~~~VsViD~~t~k~  366 (386)
T 3sjl_D          350 STGDKTLYIHDAESGEE  366 (386)
T ss_dssp             ETTTTEEEEEETTTCCE
T ss_pred             cCCCCeEEEEECCCCcE
Confidence            56799999999876643

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=98.55  E-value=2.8e-06  Score=85.93  Aligned_cols=214  Identities=9%  Similarity=0.036  Sum_probs=128.5

Q ss_pred             cEEEEEeccCcccEEEEEEcCCCcEE-EEE--CCCcEEEEcCCC----------------------CCCCCCCCEEEEEE
Q psy7057           2 YKLSTALYGHSMDVRSLSVTPDGCIL-SAS--RDKSAKLWKPND----------------------LSPGAKVNTLLSAS   56 (557)
Q Consensus         2 ~kl~~~l~gH~~~V~~l~~spdg~l~-sgs--~Dg~V~iWd~~~----------------------~~~~~~~~~l~sgs   56 (557)
                      +++++.+.   .....|+++|+|+++ +..  .++.++||.+.+                      +.+++++.++++-+
T Consensus         9 ~~~v~~~~---~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~   85 (343)
T 2qe8_A            9 LEVVAELS---LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDN   85 (343)
T ss_dssp             CEEEEEES---SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEEC
T ss_pred             eEEEEEcC---CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcC
Confidence            34444444   688999999999954 543  234244444311                      34455555444433


Q ss_pred             C-----CCeEEEEECCCCeEEEEEccc------CCcEEEEEEcCC-C-EEEEEE---CCCeEEEEeC-CCcEEEEEeCCC
Q psy7057          57 W-----DMTAKLWCLESQQCKLTIRQH------EMAVWGVIQLAN-G-IIVTGC---ADKTIKLHSE-EGEFLKTLTGHT  119 (557)
Q Consensus        57 ~-----Dg~i~iwd~~~~~~~~~l~~h------~~~V~~l~~~~~-~-~l~sgs---~dg~I~vwd~-~~~~~~~l~~h~  119 (557)
                      .     +..|.+||+.+++.+.++...      ...+..+++.++ + .+++.+   .++.|.+||. +++..+.+.+|.
T Consensus        86 g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~  165 (343)
T 2qe8_A           86 GNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYP  165 (343)
T ss_dssp             HHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCT
T ss_pred             CCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCC
Confidence            3     578999999999877766532      235678999875 5 445555   6789999995 455555554321


Q ss_pred             -----------------------------CCEEEEEEeCCCe-EEEEECCC-eEEEEECC---CCe-----EE--EEEeC
Q psy7057         120 -----------------------------DCVRGLAVLNDTD-FVSCSNDA-SIRVWDST---TGK-----CV--HTMYG  158 (557)
Q Consensus       120 -----------------------------~~V~~l~~~~~~~-lvs~s~Dg-~I~vwd~~---~~~-----~~--~~~~~  158 (557)
                                                   ..+..|+++|++. ++.+..++ .+..++..   .+.     ..  ....+
T Consensus       166 ~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g  245 (343)
T 2qe8_A          166 GIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYS  245 (343)
T ss_dssp             TTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEE
T ss_pred             cccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecc
Confidence                                         2368899999986 55665554 45444421   110     00  01112


Q ss_pred             CCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC--ceEeeC--CccEEEEEEcCCCc-EEEEEcCC
Q psy7057         159 HPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ--NSFMIP--AMSVWAVAILPNSD-IVTGSSDG  218 (557)
Q Consensus       159 h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~--~~~~~~--~~~v~~v~~~p~g~-l~sg~~Dg  218 (557)
                      +......+++  ++.++++...++.|.+||....  ..+...  ...+.++++.+++. +++.+..+
T Consensus       246 ~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~  312 (343)
T 2qe8_A          246 EKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLH  312 (343)
T ss_dssp             ECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCGG
T ss_pred             cCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCccc
Confidence            3334445666  6778888888999999998333  333222  23578899988887 44444333

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=98.54  E-value=4.2e-06  Score=92.84  Aligned_cols=169  Identities=12%  Similarity=0.103  Sum_probs=113.5

Q ss_pred             CCcEEEEECCCcEEEEcCCC--------CC-----------------CCCCCCEEEEEECCCeEEEEECCCCeEEEEEcc
Q psy7057          23 DGCILSASRDKSAKLWKPND--------LS-----------------PGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQ   77 (557)
Q Consensus        23 dg~l~sgs~Dg~V~iWd~~~--------~~-----------------~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~   77 (557)
                      ++.|+.++.++.|.-+|..+        ..                 +.-.+..|+.++.|+.|..+|..+|+.+..+..
T Consensus        77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~  156 (677)
T 1kb0_A           77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWDGRLIALDAATGKEVWHQNT  156 (677)
T ss_dssp             TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEEET
T ss_pred             CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcCCCEEEEEECCCCCEEeeecC
Confidence            45677777788888888765        10                 001357899999999999999999999988875


Q ss_pred             c-C----CcEEEEEEcCCCEEEEEEC------CCeEEEEe-CCCcEEEEEeCCCCC------------------------
Q psy7057          78 H-E----MAVWGVIQLANGIIVTGCA------DKTIKLHS-EEGEFLKTLTGHTDC------------------------  121 (557)
Q Consensus        78 h-~----~~V~~l~~~~~~~l~sgs~------dg~I~vwd-~~~~~~~~l~~h~~~------------------------  121 (557)
                      + .    ..+.+.-...++.++.++.      ++.|+.+| .+|+.+..+......                        
T Consensus       157 ~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~  236 (677)
T 1kb0_A          157 FEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWW  236 (677)
T ss_dssp             TTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHH
T ss_pred             CcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCcee
Confidence            4 2    1221111112566666553      78999999 688888776542211                        


Q ss_pred             --------EEEEEEeCC-CeEEEEECCC-------------------eEEEEECCCCeEEEEEeC--CC--------Cc-
Q psy7057         122 --------VRGLAVLND-TDFVSCSNDA-------------------SIRVWDSTTGKCVHTMYG--HP--------NF-  162 (557)
Q Consensus       122 --------V~~l~~~~~-~~lvs~s~Dg-------------------~I~vwd~~~~~~~~~~~~--h~--------~~-  162 (557)
                              ...++++++ +.++.++.++                   +|..+|..+|+.+-.++.  |.        .+ 
T Consensus       237 ~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~  316 (677)
T 1kb0_A          237 EAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMI  316 (677)
T ss_dssp             HHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCE
T ss_pred             EeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcE
Confidence                    124677776 4455665553                   599999999999888764  21        11 


Q ss_pred             EEEEEEcC---CEEEEEeCCCeEEEEECCCCc
Q psy7057         163 IYSVAAHG---DLITSGGEDQCVCVYQNKAQN  191 (557)
Q Consensus       163 V~~l~~~~---~~l~s~s~Dg~I~iwd~~~~~  191 (557)
                      +..+..+|   ..++.++.+|.++++|..+.+
T Consensus       317 l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~  348 (677)
T 1kb0_A          317 LADIKIAGKPRKVILHAPKNGFFFVLDRTNGK  348 (677)
T ss_dssp             EEEEEETTEEEEEEEECCTTSEEEEEETTTCC
T ss_pred             EEecccCCcEeeEEEEECCCCEEEEEECCCCC
Confidence            22233366   578999999999999977663

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=98.54  E-value=3.8e-06  Score=93.35  Aligned_cols=170  Identities=11%  Similarity=0.086  Sum_probs=113.5

Q ss_pred             CCcEEEEECCCcEEEEcCCC--------CC-----------------CCCCCCEEEEEECCCeEEEEECCCCeEEEEEcc
Q psy7057          23 DGCILSASRDKSAKLWKPND--------LS-----------------PGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQ   77 (557)
Q Consensus        23 dg~l~sgs~Dg~V~iWd~~~--------~~-----------------~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~   77 (557)
                      ++.++.++.++.|.-+|..+        ..                 +.-.+..++.++.|+.|..+|.++|+.+..+..
T Consensus        70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~dg~l~AlDa~TG~~~W~~~~  149 (689)
T 1yiq_A           70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVLDGRLEAIDAKTGQRAWSVDT  149 (689)
T ss_dssp             TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred             CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEccCCEEEEEECCCCCEeeeecC
Confidence            45677888888888888765        00                 011356889999999999999999998887754


Q ss_pred             c--CCcEEEEEEcC---CCEEEEEE------CCCeEEEEe-CCCcEEEEEeCCC--------------------------
Q psy7057          78 H--EMAVWGVIQLA---NGIIVTGC------ADKTIKLHS-EEGEFLKTLTGHT--------------------------  119 (557)
Q Consensus        78 h--~~~V~~l~~~~---~~~l~sgs------~dg~I~vwd-~~~~~~~~l~~h~--------------------------  119 (557)
                      .  ......+...|   ++.++.++      .++.|+.|| .+|+.+..+....                          
T Consensus       150 ~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~  229 (689)
T 1yiq_A          150 RADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVE  229 (689)
T ss_dssp             CSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHH
T ss_pred             cCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeee
Confidence            2  11111111122   56565554      378999999 6788877765210                          


Q ss_pred             -----CCEEEEEEeCC-CeEEEEECCC-------------------eEEEEECCCCeEEEEEeC--CC-------CcE--
Q psy7057         120 -----DCVRGLAVLND-TDFVSCSNDA-------------------SIRVWDSTTGKCVHTMYG--HP-------NFI--  163 (557)
Q Consensus       120 -----~~V~~l~~~~~-~~lvs~s~Dg-------------------~I~vwd~~~~~~~~~~~~--h~-------~~V--  163 (557)
                           .....+++.|+ +.++.++.++                   .|..+|..+|+.+-.++.  |.       ...  
T Consensus       230 ~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l  309 (689)
T 1yiq_A          230 QGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMIL  309 (689)
T ss_dssp             HCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEE
T ss_pred             cCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEE
Confidence                 01124677776 5566777665                   399999999999988864  21       111  


Q ss_pred             EEEEEcCC---EEEEEeCCCeEEEEECCCCce
Q psy7057         164 YSVAAHGD---LITSGGEDQCVCVYQNKAQNS  192 (557)
Q Consensus       164 ~~l~~~~~---~l~s~s~Dg~I~iwd~~~~~~  192 (557)
                      ..+.+++.   .++.++.+|.++++|..+.+.
T Consensus       310 ~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~  341 (689)
T 1yiq_A          310 AELPIDGKPRKVLMQAPKNGFFYVIDRATGEL  341 (689)
T ss_dssp             EEEEETTEEEEEEEECCTTSEEEEEETTTCCE
T ss_pred             EeeccCCcEEEEEEEECCCCeEEEEECCCCCE
Confidence            22334554   788999999999999776643

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=98.52  E-value=2.9e-06  Score=84.12  Aligned_cols=179  Identities=11%  Similarity=-0.002  Sum_probs=116.8

Q ss_pred             CCCCCC-EEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCCEEEEEE-CCCeEEEEeCCCcEEEEEeCC----
Q psy7057          45 PGAKVN-TLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGC-ADKTIKLHSEEGEFLKTLTGH----  118 (557)
Q Consensus        45 ~~~~~~-~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~~l~sgs-~dg~I~vwd~~~~~~~~l~~h----  118 (557)
                      ++++++ ++++...++.|..|+. +++ ...+..+...+.++++.++|.++++. .++.|.+|+.++.........    
T Consensus        52 ~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~g~~~~~~~~~~~~~  129 (305)
T 3dr2_A           52 WWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDADGQAHLLVGRYAGKR  129 (305)
T ss_dssp             EEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECEETTEE
T ss_pred             EeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCCCCEEEEEeccCCCc
Confidence            344566 5667777899999998 444 34555567789999999999555555 457899999766543222111    


Q ss_pred             CCCEEEEEEeCCCeEEE-----EEC-------------CCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeC
Q psy7057         119 TDCVRGLAVLNDTDFVS-----CSN-------------DASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGE  178 (557)
Q Consensus       119 ~~~V~~l~~~~~~~lvs-----~s~-------------Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~  178 (557)
                      ...+.++++.++|.+..     |..             .+.|..+|..+++.....  .......+++  +++.|+.+..
T Consensus       130 ~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~  207 (305)
T 3dr2_A          130 LNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQT  207 (305)
T ss_dssp             CSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEECTTSSEEEEEEC
T ss_pred             cCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcCCCCEEEEEec
Confidence            13467899999988665     322             256888887666644332  3345567788  6676776665


Q ss_pred             C------CeEEEEECCCCc-----eEe-eCCccEEEEEEcCCCcEEEEEcCCcEEEEecCCC
Q psy7057         179 D------QCVCVYQNKAQN-----SFM-IPAMSVWAVAILPNSDIVTGSSDGIVRVFSANPD  228 (557)
Q Consensus       179 D------g~I~iwd~~~~~-----~~~-~~~~~v~~v~~~p~g~l~sg~~Dg~I~iwd~~~~  228 (557)
                      .      +.|++|+.....     .+. ........+++.++|.+.+++.++ |.+|+....
T Consensus       208 ~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~~~g-v~~~~~~g~  268 (305)
T 3dr2_A          208 PEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSSGTG-VCVFDSDGQ  268 (305)
T ss_dssp             CC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECCSSE-EEEECTTSC
T ss_pred             CCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEecCCc-EEEECCCCC
Confidence            4      789999865321     111 112334568899999977776555 999987543

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=98.48  E-value=4.7e-08  Score=100.32  Aligned_cols=179  Identities=12%  Similarity=0.155  Sum_probs=99.1

Q ss_pred             CCEEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEEEEECCCCeEEEEEeCCCC-cEE-E
Q psy7057          90 NGIIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHTMYGHPN-FIY-S  165 (557)
Q Consensus        90 ~~~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~-~V~-~  165 (557)
                      ++.+++++.|+.|+.|| .+|+.+..+..  ..+.+..+..++. +++++.|+.|+.||..+|+.+..+..+.. .+. +
T Consensus         9 ~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~s   86 (369)
T 2hz6_A            9 ETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQAS   86 (369)
T ss_dssp             TTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTC
T ss_pred             CCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccC
Confidence            56899999999999999 68888888876  4455544555664 66778999999999988887766653321 110 1


Q ss_pred             EEE-cCCEEEEEeCCCeEEEEECCCCceEeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHhccccee
Q psy7057         166 VAA-HGDLITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEV  243 (557)
Q Consensus       166 l~~-~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v  243 (557)
                      ... .+..+++++.++.|+.||..+.+.+...... ....++|++. +++++.|+.|+.||..+++..-......    .
T Consensus        87 p~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~-~~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~----~  161 (369)
T 2hz6_A           87 PCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSA-FADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFD----Y  161 (369)
T ss_dssp             SCC-----CCCCEEEEEEEEECCC-----------------------EEEEEEEEEEECCCSSSSSCCCEEEEEE----E
T ss_pred             ceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCC-CcccccccCCEEEEEecCCEEEEEECCCCCEEEeEeccc----c
Confidence            111 4556888889999999998766332211111 0234556555 8889999999999998876542211111    1


Q ss_pred             EEEeccCC--CceeEEEEeCCCcEEEEecCCChh
Q psy7057         244 KKLKSANE--QEIGGVKVSDDGIVRVFSANPDRQ  275 (557)
Q Consensus       244 ~~l~~~~~--~~~~~vs~s~DG~IrvW~~~~~~~  275 (557)
                      ........  ....++.++.||.|+.|+...++.
T Consensus       162 ~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~  195 (369)
T 2hz6_A          162 AASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDV  195 (369)
T ss_dssp             CCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCE
T ss_pred             cCccccCCccccceEEEECCCCEEEEEECCCCcE
Confidence            11111111  013467788999999999876643

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=98.46  E-value=4.8e-06  Score=92.64  Aligned_cols=224  Identities=17%  Similarity=0.100  Sum_probs=133.5

Q ss_pred             CCCCCCCCEEEEE-----ECCCeEEEEECCCCeEEEE-EcccCCcEEEEEEcCCC-EEEEEECCCe-------------E
Q psy7057          43 LSPGAKVNTLLSA-----SWDMTAKLWCLESQQCKLT-IRQHEMAVWGVIQLANG-IIVTGCADKT-------------I  102 (557)
Q Consensus        43 ~~~~~~~~~l~sg-----s~Dg~i~iwd~~~~~~~~~-l~~h~~~V~~l~~~~~~-~l~sgs~dg~-------------I  102 (557)
                      ++++|++++|+-+     +...+|++||+.+++.+.. +...  ....++|+ ++ .|+.++.+..             |
T Consensus       134 ~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~--k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v  210 (693)
T 3iuj_A          134 LSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDV--KFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKV  210 (693)
T ss_dssp             EEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEE--ESCCCEEE-TTTEEEEEESSCCC-------CCCCEE
T ss_pred             EEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCc--eeccEEEe-CCCEEEEEEecCcccccccccCCCcEE
Confidence            4678889988743     3335799999999986543 2211  12467899 88 7777777643             8


Q ss_pred             EEEeCCCc-----EEEEEeC-CCCCEEEEEEeCCCeEE--EEEC---CCeEEEEECCCCe-EEEEEeCCCCcEEE-EEEc
Q psy7057         103 KLHSEEGE-----FLKTLTG-HTDCVRGLAVLNDTDFV--SCSN---DASIRVWDSTTGK-CVHTMYGHPNFIYS-VAAH  169 (557)
Q Consensus       103 ~vwd~~~~-----~~~~l~~-h~~~V~~l~~~~~~~lv--s~s~---Dg~I~vwd~~~~~-~~~~~~~h~~~V~~-l~~~  169 (557)
                      ++|++...     ++..... |...+.++.++|+++++  +.+.   +..|.++|+.++. ....+..+...... +..+
T Consensus       211 ~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~~~~~  290 (693)
T 3iuj_A          211 YFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSLVDNK  290 (693)
T ss_dssp             EEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEEEEEE
T ss_pred             EEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEEEecc
Confidence            88984321     2222233 45567889999998733  3332   3589999987763 44556666555544 3446


Q ss_pred             CCEEEEEe-CC---CeEEEEECCCC-----ceEeeCCccEEEEEEcCCCc-EEEEE-cCC--cEEEEecCCCCcchhHHH
Q psy7057         170 GDLITSGG-ED---QCVCVYQNKAQ-----NSFMIPAMSVWAVAILPNSD-IVTGS-SDG--IVRVFSANPDRQAEDAVQ  236 (557)
Q Consensus       170 ~~~l~s~s-~D---g~I~iwd~~~~-----~~~~~~~~~v~~v~~~p~g~-l~sg~-~Dg--~I~iwd~~~~~~~~~~~~  236 (557)
                      ++.|+..+ .+   +.|..+++...     +.+..+...+.  .|+++++ |+... .++  .|++|++........ ..
T Consensus       291 g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~~~l-~~  367 (693)
T 3iuj_A          291 GSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGKRVREV-AL  367 (693)
T ss_dssp             TTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSCEEEEE-CC
T ss_pred             CCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCCeeEEe-ec
Confidence            66554443 33   57889997653     34555555554  8888887 55444 454  688888875432211 11


Q ss_pred             hcccceeEEEeccCCCceeEEEEeCC---CcEEEEecCCC
Q psy7057         237 AQYAEEVKKLKSANEQEIGGVKVSDD---GIVRVFSANPD  273 (557)
Q Consensus       237 ~~~~~~v~~l~~~~~~~~~~vs~s~D---G~IrvW~~~~~  273 (557)
                       .....+..+...+......++.++.   ++|..|++..+
T Consensus       368 -p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g  406 (693)
T 3iuj_A          368 -PGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSG  406 (693)
T ss_dssp             -SSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTC
T ss_pred             -CCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCC
Confidence             1122344444444444444444432   78888887654

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=98.45  E-value=3e-05  Score=80.62  Aligned_cols=224  Identities=12%  Similarity=0.088  Sum_probs=141.4

Q ss_pred             cEEEEEeccCcccEEEEEEcCCCc-EEEEE----------CCCcEEEEcCCC-----------------------CCCCC
Q psy7057           2 YKLSTALYGHSMDVRSLSVTPDGC-ILSAS----------RDKSAKLWKPND-----------------------LSPGA   47 (557)
Q Consensus         2 ~kl~~~l~gH~~~V~~l~~spdg~-l~sgs----------~Dg~V~iWd~~~-----------------------~~~~~   47 (557)
                      +++..++..-..+  .++++|||+ |+.+.          .++.|.++|..+                       +.+++
T Consensus       109 ~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~sp  186 (426)
T 3c75_H          109 GRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTP  186 (426)
T ss_dssp             TEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECT
T ss_pred             CEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcC
Confidence            4566666544455  899999998 65554          477899999876                       24567


Q ss_pred             CCCEEEEEEC--CCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEeC-CCcEEEE----EeCC
Q psy7057          48 KVNTLLSASW--DMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHSE-EGEFLKT----LTGH  118 (557)
Q Consensus        48 ~~~~l~sgs~--Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~-~~~~~~~----l~~h  118 (557)
                      ++++++++..  +++|.+.|+.+++.+.++.....    ....|++  .+++.+.||.+.+.+. .++....    +...
T Consensus       187 DGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~----~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~  262 (426)
T 3c75_H          187 DNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC----YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTE  262 (426)
T ss_dssp             TSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE----EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCT
T ss_pred             CCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc----eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccC
Confidence            8899999875  57899999999998888764221    2233332  6677777888777764 3333221    1111


Q ss_pred             CCCE-EEEEEeCCCe-EEEEECCCeEEEEECCCCeEE--EEEeC------------CCCcEEEEEEcCCEEEEEeC----
Q psy7057         119 TDCV-RGLAVLNDTD-FVSCSNDASIRVWDSTTGKCV--HTMYG------------HPNFIYSVAAHGDLITSGGE----  178 (557)
Q Consensus       119 ~~~V-~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~~--~~~~~------------h~~~V~~l~~~~~~l~s~s~----  178 (557)
                      ..++ ..+.+.+++. ++..+..+.+.+.|+......  ..+.-            .......+..+++.+++...    
T Consensus       263 ~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~  342 (426)
T 3c75_H          263 DELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDE  342 (426)
T ss_dssp             TSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCT
T ss_pred             CCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEeccccc
Confidence            1111 1245677644 555567889999998654422  11110            01111233336666555432    


Q ss_pred             ------CCeEEEEECCCCceEeeC--CccEEEEEEcCCCc--EEEEE-cCCcEEEEecCCCCcc
Q psy7057         179 ------DQCVCVYQNKAQNSFMIP--AMSVWAVAILPNSD--IVTGS-SDGIVRVFSANPDRQA  231 (557)
Q Consensus       179 ------Dg~I~iwd~~~~~~~~~~--~~~v~~v~~~p~g~--l~sg~-~Dg~I~iwd~~~~~~~  231 (557)
                            ++.|.++|..+.+.+...  ....+.++|+|+++  ++++. .++.|.++|..+.+..
T Consensus       343 gthk~~s~~VsVID~~T~kvv~~I~vg~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv  406 (426)
T 3c75_H          343 WKHKAASRFVVVLNAETGERINKIELGHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEEL  406 (426)
T ss_dssp             TCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEE
T ss_pred             ccccCCCCEEEEEECCCCeEEEEEECCCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEE
Confidence                  357999998877333221  22588999999987  55666 4899999999887654

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=98.43  E-value=0.00016  Score=81.69  Aligned_cols=215  Identities=12%  Similarity=0.163  Sum_probs=148.7

Q ss_pred             cccEEEEEEcCCCcEEEEECCCcEEEEcCCC-----------------------CCCCCCCCEEEEEECCCeEEEEECCC
Q psy7057          12 SMDVRSLSVTPDGCILSASRDKSAKLWKPND-----------------------LSPGAKVNTLLSASWDMTAKLWCLES   68 (557)
Q Consensus        12 ~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~-----------------------~~~~~~~~~l~sgs~Dg~i~iwd~~~   68 (557)
                      ...|.++...+++.|..|+.++-+.+|+..+                       +..+.+ ..|..|+.+ -|.+|+..+
T Consensus       214 ~~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~-g~lWigt~~-Gl~~~~~~~  291 (795)
T 4a2l_A          214 TKQIQAILQQSPTRIWVATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQ-NRLWIGTFN-DLNIYHEGT  291 (795)
T ss_dssp             CCCEEEEEEEETTEEEEEEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTT-SCEEEEESS-CEEEEETTT
T ss_pred             CCeeEEEEEcCCCCEEEEECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCC-CCEEEEeCC-hhheEcCCC
Confidence            4578899888888888787665577787654                       111122 334556655 588899877


Q ss_pred             CeEEEEEcc-------cCCcEEEEEEcCCCEEEEEECCCeEEEEeCCCcEEEEEeC-------CCCCEEEEEEeCCCeEE
Q psy7057          69 QQCKLTIRQ-------HEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKTLTG-------HTDCVRGLAVLNDTDFV  134 (557)
Q Consensus        69 ~~~~~~l~~-------h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~~~~~~~~l~~-------h~~~V~~l~~~~~~~lv  134 (557)
                      ++.......       ....|.++...++|.|..|+.++-|..++........+..       ....|.++...+++.+.
T Consensus       292 ~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lW  371 (795)
T 4a2l_A          292 DSFASYSSNPVENGSLSQRSVRSIFMDSQGGMWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLW  371 (795)
T ss_dssp             TEEEEECCCTTSTTSCSSSCEEEEEECTTSCEEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCEE
T ss_pred             CeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCEE
Confidence            664432211       2367999999999989999998889999854333333321       23569999998889998


Q ss_pred             EEECCCeEEEEECCCCeEEEEEeC--------CCCcEEEEEEc--CCEEEEEeCCCeEEEEECCCC--ceEe-----eCC
Q psy7057         135 SCSNDASIRVWDSTTGKCVHTMYG--------HPNFIYSVAAH--GDLITSGGEDQCVCVYQNKAQ--NSFM-----IPA  197 (557)
Q Consensus       135 s~s~Dg~I~vwd~~~~~~~~~~~~--------h~~~V~~l~~~--~~~l~s~s~Dg~I~iwd~~~~--~~~~-----~~~  197 (557)
                      .|+.++-|..||..+++...-...        ....|.++..+  +..|..|+.++-|..|+..+.  ..+.     .+.
T Consensus       372 iGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~  451 (795)
T 4a2l_A          372 IGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVN  451 (795)
T ss_dssp             EEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSC
T ss_pred             EEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCC
Confidence            999988899999877654332211        24678899883  443788888788999997654  2222     134


Q ss_pred             ccEEEEEEcCCCcEEEEEcCCcEEEEecCCCC
Q psy7057         198 MSVWAVAILPNSDIVTGSSDGIVRVFSANPDR  229 (557)
Q Consensus       198 ~~v~~v~~~p~g~l~sg~~Dg~I~iwd~~~~~  229 (557)
                      ..|+++...+++.|..|+.+ -|.+|+..+.+
T Consensus       452 ~~v~~i~~d~~g~lwigt~~-Gl~~~~~~~~~  482 (795)
T 4a2l_A          452 ENVYAILPDGEGNLWLGTLS-ALVRFNPEQRS  482 (795)
T ss_dssp             SCEEEEEECSSSCEEEEESS-CEEEEETTTTE
T ss_pred             CeeEEEEECCCCCEEEEecC-ceeEEeCCCCe
Confidence            57999999998888778774 48888877654

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=98.42  E-value=3e-05  Score=77.68  Aligned_cols=161  Identities=9%  Similarity=-0.043  Sum_probs=106.3

Q ss_pred             cccEEEEEEcCCCcEEEEECCCcEEEEcCCC--------------------CCCCCCCCEEEEEEC------CCeEEEEE
Q psy7057          12 SMDVRSLSVTPDGCILSASRDKSAKLWKPND--------------------LSPGAKVNTLLSASW------DMTAKLWC   65 (557)
Q Consensus        12 ~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~--------------------~~~~~~~~~l~sgs~------Dg~i~iwd   65 (557)
                      ...|.+++++++|+++.++.++ |.+||..+                    +.+++++.++++...      .+.|..++
T Consensus        89 ~~~v~~i~~~~dg~l~v~~~~g-l~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~  167 (326)
T 2ghs_A           89 PFMGSALAKISDSKQLIASDDG-LFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA  167 (326)
T ss_dssp             SSCEEEEEEEETTEEEEEETTE-EEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE
T ss_pred             CCcceEEEEeCCCeEEEEECCC-EEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe
Confidence            4679999999999966666544 88888653                    234556666555432      23455555


Q ss_pred             CCCCeEEEEEcccCCcEEEEEEcCCC-EE-EEEECCCeEEEEeC---CC-c-----EEEEEeCCCCCEEEEEEeCCCeEE
Q psy7057          66 LESQQCKLTIRQHEMAVWGVIQLANG-II-VTGCADKTIKLHSE---EG-E-----FLKTLTGHTDCVRGLAVLNDTDFV  134 (557)
Q Consensus        66 ~~~~~~~~~l~~h~~~V~~l~~~~~~-~l-~sgs~dg~I~vwd~---~~-~-----~~~~l~~h~~~V~~l~~~~~~~lv  134 (557)
                        +++... +..+......++|+|++ .+ ++.+.++.|.+|+.   ++ .     ....+......+..+++.+++.+.
T Consensus       168 --~g~~~~-~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lw  244 (326)
T 2ghs_A          168 --KGKVTK-LFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIW  244 (326)
T ss_dssp             --TTEEEE-EEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEE
T ss_pred             --CCcEEE-eeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEE
Confidence              454332 33334457789999998 44 45556789999995   34 2     122233344567889999988865


Q ss_pred             E-EECCCeEEEEECCCCeEEEEEeCCCCcEEEEEEc---CCEEEEEe
Q psy7057         135 S-CSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAH---GDLITSGG  177 (557)
Q Consensus       135 s-~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~~---~~~l~s~s  177 (557)
                      . ...++.|.+||. +++.+..+..+...+.+++|.   ++.|+.++
T Consensus       245 va~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~  290 (326)
T 2ghs_A          245 NARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDASRLLVTS  290 (326)
T ss_dssp             EEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEESTTSCEEEEEE
T ss_pred             EEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEecCCCCEEEEEe
Confidence            4 445688999997 678888887777789999984   34554443

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=98.40  E-value=0.00028  Score=79.59  Aligned_cols=215  Identities=10%  Similarity=0.088  Sum_probs=146.7

Q ss_pred             cccEEEEEEcCCCcEEEEECCCcEEEEcCCC----------------------CCCCCCCCEEEEEECCCeEEEEECCCC
Q psy7057          12 SMDVRSLSVTPDGCILSASRDKSAKLWKPND----------------------LSPGAKVNTLLSASWDMTAKLWCLESQ   69 (557)
Q Consensus        12 ~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~----------------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~   69 (557)
                      ...|.++...++|.|..|+.++-|..|+...                      +..+.+ ..|..|+.++-|..|+..++
T Consensus       309 ~~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~-g~lWiGt~~~Gl~~~~~~~~  387 (795)
T 4a2l_A          309 QRSVRSIFMDSQGGMWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKD-KNLWIGTNDGGLNLYNPITQ  387 (795)
T ss_dssp             SSCEEEEEECTTSCEEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTT-SCEEEEESSSCEEEECTTTC
T ss_pred             CCcEEEEEEeCCcCEEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCC-CCEEEEECCCCeEEEcCCCC
Confidence            3679999999999999999988888887543                      111222 34666788878999998776


Q ss_pred             eEEEEEcc--------cCCcEEEEEEcCCCE-EEEEECCCeEEEEeCCCcEEEEEeC-----CCCCEEEEEEeCCCeEEE
Q psy7057          70 QCKLTIRQ--------HEMAVWGVIQLANGI-IVTGCADKTIKLHSEEGEFLKTLTG-----HTDCVRGLAVLNDTDFVS  135 (557)
Q Consensus        70 ~~~~~l~~--------h~~~V~~l~~~~~~~-l~sgs~dg~I~vwd~~~~~~~~l~~-----h~~~V~~l~~~~~~~lvs  135 (557)
                      +.......        ....|.+++..+++. |..|+.++-+..+|........+..     ....|.++...+++.|..
T Consensus       388 ~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwi  467 (795)
T 4a2l_A          388 RFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWL  467 (795)
T ss_dssp             CEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEE
T ss_pred             cEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEE
Confidence            54432211        246799999888886 9999998889999965444444432     346799999888888887


Q ss_pred             EECCCeEEEEECCCCeEEEEEeC------CCCcEEEEEEcC-CEEEEEeCCCeEEEEECCCCce-Ee-------eCCccE
Q psy7057         136 CSNDASIRVWDSTTGKCVHTMYG------HPNFIYSVAAHG-DLITSGGEDQCVCVYQNKAQNS-FM-------IPAMSV  200 (557)
Q Consensus       136 ~s~Dg~I~vwd~~~~~~~~~~~~------h~~~V~~l~~~~-~~l~s~s~Dg~I~iwd~~~~~~-~~-------~~~~~v  200 (557)
                      |+. +-+.+||..+++.......      ....|.++..+. ..|..|+. +-|..|+..+... +.       .+...|
T Consensus       468 gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~Gl~~~~~~~~~~~~~~~~~~~~l~~~~i  545 (795)
T 4a2l_A          468 GTL-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-EGLSVFKQEGLDIQKASILPVSNVTKLFT  545 (795)
T ss_dssp             EES-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-SCEEEEEEETTEEEECCCSCSCGGGGSCE
T ss_pred             Eec-CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC-CceEEEeCCCCeEEEecCCCCCCCCCCee
Confidence            777 4588899877654332211      235788888832 23555555 4577787544321 11       123468


Q ss_pred             EEEEEcCCCcEEEEEcCCcEEEEecCCCCc
Q psy7057         201 WAVAILPNSDIVTGSSDGIVRVFSANPDRQ  230 (557)
Q Consensus       201 ~~v~~~p~g~l~sg~~Dg~I~iwd~~~~~~  230 (557)
                      .++...++|.+..|+.. -|..|+..+.+.
T Consensus       546 ~~i~~d~~g~lWigT~~-Gl~~~d~~~~~~  574 (795)
T 4a2l_A          546 NCIYEASNGIIWVGTRE-GFYCFNEKDKQI  574 (795)
T ss_dssp             EEEEECTTSCEEEEESS-CEEEEETTTTEE
T ss_pred             EEEEECCCCCEEEEeCC-CceeECCCCCcE
Confidence            99999999997777776 477888765543

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=98.38  E-value=7e-05  Score=77.83  Aligned_cols=110  Identities=5%  Similarity=-0.100  Sum_probs=81.6

Q ss_pred             CCCCEEEEEECC-----CeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEE----------CCCeEEEEe-CCC
Q psy7057          47 AKVNTLLSASWD-----MTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGC----------ADKTIKLHS-EEG  109 (557)
Q Consensus        47 ~~~~~l~sgs~D-----g~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs----------~dg~I~vwd-~~~  109 (557)
                      +++..+++....     ++|.++|+.+++.+.++.....+  .++++|++ .++.+.          .++.|.++| .+.
T Consensus        82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~  159 (426)
T 3c75_H           82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF  159 (426)
T ss_dssp             CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred             CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence            456666666653     69999999999999998766666  89999999 444443          467899999 566


Q ss_pred             cEEEEEeCC-------CCCEEEEEEeCCCe-EEEEEC--CCeEEEEECCCCeEEEEEeC
Q psy7057         110 EFLKTLTGH-------TDCVRGLAVLNDTD-FVSCSN--DASIRVWDSTTGKCVHTMYG  158 (557)
Q Consensus       110 ~~~~~l~~h-------~~~V~~l~~~~~~~-lvs~s~--Dg~I~vwd~~~~~~~~~~~~  158 (557)
                      +.+..+.--       ......+.++|+++ ++.+..  +++|.+.|+.+++.+.++.-
T Consensus       160 ~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v  218 (426)
T 3c75_H          160 LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDV  218 (426)
T ss_dssp             CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEEC
T ss_pred             cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEc
Confidence            676665421       23456789999987 445553  57899999999998888763

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=98.24  E-value=0.00031  Score=68.01  Aligned_cols=201  Identities=11%  Similarity=0.036  Sum_probs=128.9

Q ss_pred             cEEEEEeccCcc--cEEEEEEcCCCcEEEEECCCcEEEEcCCCCCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEccc-
Q psy7057           2 YKLSTALYGHSM--DVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQH-   78 (557)
Q Consensus         2 ~kl~~~l~gH~~--~V~~l~~spdg~l~sgs~Dg~V~iWd~~~~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h-   78 (557)
                      |++++++. |..  ....++|++++.|+.++..                       ..++.|+++|+.+++.+.++... 
T Consensus         9 ~~vv~~~p-~~~~~f~~Gl~~~~dg~Lyvstg~-----------------------~~~s~v~~iD~~tg~v~~~i~l~~   64 (266)
T 2iwa_A            9 VEVLNEFP-HDPYAFTQGLVYAENDTLFESTGL-----------------------YGRSSVRQVALQTGKVENIHKMDD   64 (266)
T ss_dssp             EEEEEEEE-CCTTCCEEEEEECSTTEEEEEECS-----------------------TTTCEEEEEETTTCCEEEEEECCT
T ss_pred             ceEEEEEE-CCCCCCcccEEEeCCCeEEEECCC-----------------------CCCCEEEEEECCCCCEEEEEecCC
Confidence            56667774 443  3578888877543322110                       02467888888888877776422 


Q ss_pred             CCcEEEEEEcCCCEEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCC-eEEEEECCCeEEEEECCCCeEEEEE
Q psy7057          79 EMAVWGVIQLANGIIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDT-DFVSCSNDASIRVWDSTTGKCVHTM  156 (557)
Q Consensus        79 ~~~V~~l~~~~~~~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~-~lvs~s~Dg~I~vwd~~~~~~~~~~  156 (557)
                      ......+++..+.+.++.-.++.+.++| .+.+.+.++..-...-+.++  +++ .++.+..+++|.++|..+.+.+.++
T Consensus        65 ~~fgeGi~~~g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~~g~glt--~Dg~~l~vs~gs~~l~viD~~t~~v~~~I  142 (266)
T 2iwa_A           65 SYFGEGLTLLNEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQMKDGWGLA--TDGKILYGSDGTSILYEIDPHTFKLIKKH  142 (266)
T ss_dssp             TCCEEEEEEETTEEEEEETTCSEEEEEETTTTEEEEEEECCSSSCCEEE--ECSSSEEEECSSSEEEEECTTTCCEEEEE
T ss_pred             CcceEEEEEeCCEEEEEEecCCEEEEEECCCCcEEEEEECCCCCeEEEE--ECCCEEEEECCCCeEEEEECCCCcEEEEE
Confidence            2233456665443555556688999999 56677777753212223344  454 3555557889999999999888887


Q ss_pred             eCC--C---CcEEEEEE-cCCEEEEEeCCCeEEEEECCCC---ceEeeC-------------CccEEEEEEcCCCc--EE
Q psy7057         157 YGH--P---NFIYSVAA-HGDLITSGGEDQCVCVYQNKAQ---NSFMIP-------------AMSVWAVAILPNSD--IV  212 (557)
Q Consensus       157 ~~h--~---~~V~~l~~-~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~-------------~~~v~~v~~~p~g~--l~  212 (557)
                      .--  .   ..+..+.+ ++..++....++.|.+.|..+.   ..+...             ......++++|+++  ++
T Consensus       143 ~Vg~~~~p~~~~nele~~dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfV  222 (266)
T 2iwa_A          143 NVKYNGHRVIRLNELEYINGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFV  222 (266)
T ss_dssp             ECEETTEECCCEEEEEEETTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEE
T ss_pred             EECCCCcccccceeEEEECCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEE
Confidence            632  1   23566777 5544555556789999998776   333221             12568999999987  66


Q ss_pred             EEEcCCcEEEEecCCC
Q psy7057         213 TGSSDGIVRVFSANPD  228 (557)
Q Consensus       213 sg~~Dg~I~iwd~~~~  228 (557)
                      ++...++|.+.++...
T Consensus       223 Tgk~~~~v~~i~l~~~  238 (266)
T 2iwa_A          223 TGKLWPKLFEIKLHLV  238 (266)
T ss_dssp             EETTCSEEEEEEEEEC
T ss_pred             ECCCCCeEEEEEEecc
Confidence            7778899999887653

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=98.24  E-value=4.2e-05  Score=77.17  Aligned_cols=183  Identities=12%  Similarity=0.041  Sum_probs=116.1

Q ss_pred             CCCCCCCCEEEEEEC--CCeEEEEECCCCeEEEEE-------cccCCcEEEEEEcCCCEEEEEEC------CCeEEEEeC
Q psy7057          43 LSPGAKVNTLLSASW--DMTAKLWCLESQQCKLTI-------RQHEMAVWGVIQLANGIIVTGCA------DKTIKLHSE  107 (557)
Q Consensus        43 ~~~~~~~~~l~sgs~--Dg~i~iwd~~~~~~~~~l-------~~h~~~V~~l~~~~~~~l~sgs~------dg~I~vwd~  107 (557)
                      +++++++..+++...  ++.++||.+.+++.. .+       ..|-..+.++++.+++.|.....      +..|.+||.
T Consensus        22 va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~  100 (343)
T 2qe8_A           22 ITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDT  100 (343)
T ss_dssp             EEECTTSCEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEET
T ss_pred             EEECCCCCEEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEEC
Confidence            445556777777542  342555555455432 22       23456899999999995554443      578999995


Q ss_pred             -CCcEEEEEeCC------CCCEEEEEEeCC-CeE-EEEE---CCCeEEEEECCCCeEEEEEeCCC---------------
Q psy7057         108 -EGEFLKTLTGH------TDCVRGLAVLND-TDF-VSCS---NDASIRVWDSTTGKCVHTMYGHP---------------  160 (557)
Q Consensus       108 -~~~~~~~l~~h------~~~V~~l~~~~~-~~l-vs~s---~Dg~I~vwd~~~~~~~~~~~~h~---------------  160 (557)
                       +++.+..+...      ...+..++++++ +.+ ++.+   .++.|.+||+.+++..+.+.+|.               
T Consensus       101 ~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~  180 (343)
T 2qe8_A          101 LNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVP  180 (343)
T ss_dssp             TTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEE
T ss_pred             CCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEE
Confidence             46666665432      235688999975 554 4555   67899999998888776664431               


Q ss_pred             --------------CcEEEEEE--cCCEEEEEeCCC-eEEEEECC---CC--------c--eEeeCCccEEEEEEcCCCc
Q psy7057         161 --------------NFIYSVAA--HGDLITSGGEDQ-CVCVYQNK---AQ--------N--SFMIPAMSVWAVAILPNSD  210 (557)
Q Consensus       161 --------------~~V~~l~~--~~~~l~s~s~Dg-~I~iwd~~---~~--------~--~~~~~~~~v~~v~~~p~g~  210 (557)
                                    ..+..|++  +++.|+.+..++ .+..++..   ..        .  ....+......+++.++|.
T Consensus       181 ~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~  260 (343)
T 2qe8_A          181 VQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHN  260 (343)
T ss_dssp             CBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCC
T ss_pred             EEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCC
Confidence                          12466777  566777776655 55555521   10        0  1222333456789999998


Q ss_pred             -EEEEEcCCcEEEEecC
Q psy7057         211 -IVTGSSDGIVRVFSAN  226 (557)
Q Consensus       211 -l~sg~~Dg~I~iwd~~  226 (557)
                       +++...++.|.+|+..
T Consensus       261 l~va~~~~~~V~~~d~~  277 (343)
T 2qe8_A          261 IYVGDLAHSAIGVITSA  277 (343)
T ss_dssp             EEEEEGGGTEEEEEETT
T ss_pred             EEEEccCCCeEEEEECC
Confidence             5566678899999983

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=98.22  E-value=0.00028  Score=78.32  Aligned_cols=134  Identities=10%  Similarity=0.040  Sum_probs=89.6

Q ss_pred             CCcEEEEECCCcEEEEcCCC--------CC----------CCC--CCCEEEEEE------CCCeEEEEECCCCeEEEEEc
Q psy7057          23 DGCILSASRDKSAKLWKPND--------LS----------PGA--KVNTLLSAS------WDMTAKLWCLESQQCKLTIR   76 (557)
Q Consensus        23 dg~l~sgs~Dg~V~iWd~~~--------~~----------~~~--~~~~l~sgs------~Dg~i~iwd~~~~~~~~~l~   76 (557)
                      +++++.++.|+.|..+|..+        ..          ..|  .+..++.++      .++.|+.||..+|+.+..+.
T Consensus       121 ~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~  200 (689)
T 1yiq_A          121 KGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY  200 (689)
T ss_dssp             TTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred             CCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence            45688888999999999876        11          011  134555554      36899999999999988775


Q ss_pred             ccC-------------------------------CcEEEEEEcCCC-EEEEEECCCe-------------------EEEE
Q psy7057          77 QHE-------------------------------MAVWGVIQLANG-IIVTGCADKT-------------------IKLH  105 (557)
Q Consensus        77 ~h~-------------------------------~~V~~l~~~~~~-~l~sgs~dg~-------------------I~vw  105 (557)
                      ...                               .....+++.+++ +++.++.++.                   |..+
T Consensus       201 ~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~Al  280 (689)
T 1yiq_A          201 TVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAV  280 (689)
T ss_dssp             SSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEE
T ss_pred             ccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEE
Confidence            210                               011246777755 8888887764                   8999


Q ss_pred             e-CCCcEEEEEeC--CC-------CCEEEEEEeCCC----eEEEEECCCeEEEEECCCCeEEEEE
Q psy7057         106 S-EEGEFLKTLTG--HT-------DCVRGLAVLNDT----DFVSCSNDASIRVWDSTTGKCVHTM  156 (557)
Q Consensus       106 d-~~~~~~~~l~~--h~-------~~V~~l~~~~~~----~lvs~s~Dg~I~vwd~~~~~~~~~~  156 (557)
                      | .+|+.+..+..  |.       ..+.......++    .++.++.+|.++++|.++|+.+...
T Consensus       281 D~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~  345 (689)
T 1yiq_A          281 NADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAK  345 (689)
T ss_dssp             ETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEE
T ss_pred             EccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccc
Confidence            9 67888877764  22       122222222244    3668899999999999999987543

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=98.20  E-value=0.00011  Score=81.33  Aligned_cols=210  Identities=10%  Similarity=0.015  Sum_probs=136.2

Q ss_pred             CCcEEEEECCCcEEEEcCCC--------CC------CC------CCCCEEEEEEC------CCeEEEEECCCCeEEEEEc
Q psy7057          23 DGCILSASRDKSAKLWKPND--------LS------PG------AKVNTLLSASW------DMTAKLWCLESQQCKLTIR   76 (557)
Q Consensus        23 dg~l~sgs~Dg~V~iWd~~~--------~~------~~------~~~~~l~sgs~------Dg~i~iwd~~~~~~~~~l~   76 (557)
                      +++|+.++.|+.|..+|..+        ..      ..      ..+..++.++.      ++.|+.+|..+|+.+.++.
T Consensus       128 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~  207 (677)
T 1kb0_A          128 KGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWF  207 (677)
T ss_dssp             TTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred             CCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEec
Confidence            45688888999999999876        11      00      02356666654      7999999999999988875


Q ss_pred             ccCCc--------------------------------EEEEEEcCCC-EEEEEECCC-------------------eEEE
Q psy7057          77 QHEMA--------------------------------VWGVIQLANG-IIVTGCADK-------------------TIKL  104 (557)
Q Consensus        77 ~h~~~--------------------------------V~~l~~~~~~-~l~sgs~dg-------------------~I~v  104 (557)
                      .....                                ...+++.+++ +++.++.++                   .|..
T Consensus       208 ~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~A  287 (677)
T 1kb0_A          208 SVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVA  287 (677)
T ss_dssp             SSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEE
T ss_pred             cCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEE
Confidence            43211                                1246777765 777777664                   4888


Q ss_pred             Ee-CCCcEEEEEeC--CC-------CCEEEEEEeCCC---e-EEEEECCCeEEEEECCCCeEEEEEeCCCC---------
Q psy7057         105 HS-EEGEFLKTLTG--HT-------DCVRGLAVLNDT---D-FVSCSNDASIRVWDSTTGKCVHTMYGHPN---------  161 (557)
Q Consensus       105 wd-~~~~~~~~l~~--h~-------~~V~~l~~~~~~---~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~---------  161 (557)
                      +| .+|+.+..+..  |.       .....+....+|   . ++.++.+|.++++|..+|+.+..+.....         
T Consensus       288 lD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~  367 (677)
T 1kb0_A          288 LDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKH  367 (677)
T ss_dssp             ECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTT
T ss_pred             EECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCC
Confidence            99 57888777653  31       112222333355   3 67899999999999999999877652210         


Q ss_pred             --cEE------------------------EEEE--cCCEEEEEeC-----------------------------------
Q psy7057         162 --FIY------------------------SVAA--HGDLITSGGE-----------------------------------  178 (557)
Q Consensus       162 --~V~------------------------~l~~--~~~~l~s~s~-----------------------------------  178 (557)
                        .+.                        .+++  +..++++...                                   
T Consensus       368 g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~  447 (677)
T 1kb0_A          368 GKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFN  447 (677)
T ss_dssp             SCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEEC
T ss_pred             CceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccc
Confidence              111                        3445  3456655432                                   


Q ss_pred             --------CCeEEEEECCCCceEee--CCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcch
Q psy7057         179 --------DQCVCVYQNKAQNSFMI--PAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAE  232 (557)
Q Consensus       179 --------Dg~I~iwd~~~~~~~~~--~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~  232 (557)
                              .+.|..||+.+.+.+-.  +..+++...+...+. +++++.||.+++||..+++.+.
T Consensus       448 ~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw  512 (677)
T 1kb0_A          448 AEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLW  512 (677)
T ss_dssp             SSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEE
T ss_pred             cccCCCCCccEEEEEeCCCCcEEeecCCCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceee
Confidence                    27899999887733221  222344445555555 7788999999999999887653

>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}

Probab=98.19  E-value=0.00076  Score=75.83  Aligned_cols=255  Identities=9%  Similarity=0.019  Sum_probs=158.8

Q ss_pred             ccEEEEEEcCCCcEEEEECCCcEEEEcCCC-----------------------CCCCCCCCEEEEEECCCeEEEEECCCC
Q psy7057          13 MDVRSLSVTPDGCILSASRDKSAKLWKPND-----------------------LSPGAKVNTLLSASWDMTAKLWCLESQ   69 (557)
Q Consensus        13 ~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~-----------------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~   69 (557)
                      ..|.++...++|.|..|+.++-+..|+..+                       +..+.++ .|..|+.+ -+.+||..++
T Consensus       163 ~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g-~lwigt~~-Gl~~~d~~~~  240 (781)
T 3v9f_A          163 EQTWTATEAEDGKLYIGHVEGGLSILSLNDKSVKHFVHDPQNPNSLPGNDVRCIYKDTNG-NIWIGTSK-GLALFNANTE  240 (781)
T ss_dssp             CCEEEEEEEETTEEEEEETTTEEEEEETTTTEEEEECC--------CCSSEEEEEECTTC-CEEEEETT-EEEEEETTTT
T ss_pred             cceEEEEECCCCCEEEEecCCCeEEEcCCCCceEeeecCCCCcccCCCCceeEEEEcCCC-CEEEEeCC-cHheECCCCC
Confidence            468899888888888888775677777544                       1111222 34555655 6888998776


Q ss_pred             eEEEEEc-------ccCCcEEEEEEcCCCEEEEEECCCeEEEEeCCCcEEEEEe---------------CCCCCEEEEEE
Q psy7057          70 QCKLTIR-------QHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKTLT---------------GHTDCVRGLAV  127 (557)
Q Consensus        70 ~~~~~l~-------~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~~~~~~~~l~---------------~h~~~V~~l~~  127 (557)
                      +......       .....|.++...++|.|..|+..+-|.+++........+.               .....|.++..
T Consensus       241 ~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~  320 (781)
T 3v9f_A          241 TFTNFHNNPGNIHGALSSYIFSIKQLKDNKLWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQ  320 (781)
T ss_dssp             EEEC-----------CCCCEEEEEECTTSEEEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEE
T ss_pred             cEEEEEcCCCccccccCceEEEEEECCCCCEEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEE
Confidence            5432211       1246799999989998888888667888885443322221               12457999999


Q ss_pred             eCCCeEEEEECCCeEEEEECCCCeEEEEEe----------CCCCcEEEEEEcC-CEEEEEeCCCeEEEEECCCCc--eE-
Q psy7057         128 LNDTDFVSCSNDASIRVWDSTTGKCVHTMY----------GHPNFIYSVAAHG-DLITSGGEDQCVCVYQNKAQN--SF-  193 (557)
Q Consensus       128 ~~~~~lvs~s~Dg~I~vwd~~~~~~~~~~~----------~h~~~V~~l~~~~-~~l~s~s~Dg~I~iwd~~~~~--~~-  193 (557)
                      .+++.+..|+.++-|..++..+..... +.          .....|.++..+. ..|..|+.++-|..|+..+..  .+ 
T Consensus       321 D~~g~lWigt~~~Gl~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~  399 (781)
T 3v9f_A          321 DSFNNIWIGTWGGGINFISNAPPTFHT-WSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTDGGGINVFENGKRVAIYNK  399 (781)
T ss_dssp             CSSCCEEEEEBSSCEEEECSSCCSCEE-EC----CCCSSCCSSSCEEEEEECTTSCEEEEEBSSCEEEEETTEEEEECC-
T ss_pred             eCCCCEEEEecCCeEEEeCCCCCccee-eccCccccccCCCCCcceEEEEEcCCCCEEEEeCCCcEEEEECCCCeEEEcc
Confidence            888988899988889999976554322 21          0235789998843 457777767778888865431  11 


Q ss_pred             ---eeCCccEEEEEEcCCCcEEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEec
Q psy7057         194 ---MIPAMSVWAVAILPNSDIVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSA  270 (557)
Q Consensus       194 ---~~~~~~v~~v~~~p~g~l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~  270 (557)
                         ......|++++..+++.|..|+.++-|..++..+++.............+..+.......  +-.++. +-|.+|+.
T Consensus       400 ~~~~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~--lwigt~-~Gl~~~~~  476 (781)
T 3v9f_A          400 ENRELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKK--IWIGTH-AGVFVIDL  476 (781)
T ss_dssp             ----CCCSBEEEEEECTTSCEEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSE--EEEEET-TEEEEEES
T ss_pred             CCCCCCCcceEEEEECCCCCEEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCC--EEEEEC-CceEEEeC
Confidence               123357999999888888888887778888876554322111011223455554443333  333444 44667776


Q ss_pred             CCC
Q psy7057         271 NPD  273 (557)
Q Consensus       271 ~~~  273 (557)
                      ...
T Consensus       477 ~~~  479 (781)
T 3v9f_A          477 ASK  479 (781)
T ss_dssp             SSS
T ss_pred             CCC
Confidence            543

>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}

Probab=98.19  E-value=0.00099  Score=74.89  Aligned_cols=257  Identities=11%  Similarity=0.019  Sum_probs=161.2

Q ss_pred             cccEEEEEEcCCCcEEEEECCCcEEEEcCCCC------------------------------CCCCCCCEEEEEECCCeE
Q psy7057          12 SMDVRSLSVTPDGCILSASRDKSAKLWKPNDL------------------------------SPGAKVNTLLSASWDMTA   61 (557)
Q Consensus        12 ~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~~------------------------------~~~~~~~~l~sgs~Dg~i   61 (557)
                      ...|+++...++|.|..|+..+-|.+++..+-                              ..+. ...|-.|+.++-|
T Consensus       257 ~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~-~g~lWigt~~~Gl  335 (781)
T 3v9f_A          257 SSYIFSIKQLKDNKLWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDS-FNNIWIGTWGGGI  335 (781)
T ss_dssp             CCCEEEEEECTTSEEEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECS-SCCEEEEEBSSCE
T ss_pred             CceEEEEEECCCCCEEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeC-CCCEEEEecCCeE
Confidence            35799999999999888888566777775541                              0111 2345667777778


Q ss_pred             EEEECCCCeEEEEEc------c---cCCcEEEEEEcCCCEEEEEECCCeEEEEeCCCcEEEEE----eCCCCCEEEEEEe
Q psy7057          62 KLWCLESQQCKLTIR------Q---HEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKTL----TGHTDCVRGLAVL  128 (557)
Q Consensus        62 ~iwd~~~~~~~~~l~------~---h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~~~~~~~~l----~~h~~~V~~l~~~  128 (557)
                      ..++..+........      .   ....|.+++..+++.|..|+.++-|..++........+    ......|.++...
T Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d  415 (781)
T 3v9f_A          336 NFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKD  415 (781)
T ss_dssp             EEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEEC
T ss_pred             EEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEEC
Confidence            888876554322110      0   23579999998888888888777788888554333222    1234679999988


Q ss_pred             CCCeEEEEECCCeEEEEECCCCeEEEEEe--CCCCcEEEEEEc-CCEEEEEeCCCeEEEEECCCC--ceEeeC------C
Q psy7057         129 NDTDFVSCSNDASIRVWDSTTGKCVHTMY--GHPNFIYSVAAH-GDLITSGGEDQCVCVYQNKAQ--NSFMIP------A  197 (557)
Q Consensus       129 ~~~~lvs~s~Dg~I~vwd~~~~~~~~~~~--~h~~~V~~l~~~-~~~l~s~s~Dg~I~iwd~~~~--~~~~~~------~  197 (557)
                      +++.|..|+.++-|..+|..+++......  .....|.++..+ ...|..|+. +-|..|+..+.  ..+...      .
T Consensus       416 ~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~  494 (781)
T 3v9f_A          416 SEGNLWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTH-AGVFVIDLASKKVIHHYDTSNSQLLE  494 (781)
T ss_dssp             TTSCEEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEET-TEEEEEESSSSSCCEEECTTTSSCSC
T ss_pred             CCCCEEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEEC-CceEEEeCCCCeEEecccCccccccc
Confidence            88888888887889999977765432211  134678998884 345666776 56888886543  333221      3


Q ss_pred             ccEEEEEEcCCCcEEEEEcCCcEEEEecCCCCcchhHHHhc-ccceeEEEeccCCCceeEEEEeCCCcEEEEecCC
Q psy7057         198 MSVWAVAILPNSDIVTGSSDGIVRVFSANPDRQAEDAVQAQ-YAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANP  272 (557)
Q Consensus       198 ~~v~~v~~~p~g~l~sg~~Dg~I~iwd~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~  272 (557)
                      ..|.++...++|.+..|+.++-|..|+..+.+......... ....+..+.......  +-.++.+|.|..|+...
T Consensus       495 ~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~--lWi~T~~Glv~~~d~~~  568 (781)
T 3v9f_A          495 NFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQ--MWLATGEGLVCFPSARN  568 (781)
T ss_dssp             SCEEEEEECTTCCEEEEESSSCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSC--EEEEETTEEEEESCTTT
T ss_pred             ceeEEEEEcCCCCEEEEEcCCCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCC--EEEEECCCceEEECCCC
Confidence            57899999999998888875557778876543321111111 122344444433333  23334466546666543

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=98.13  E-value=0.0011  Score=64.04  Aligned_cols=202  Identities=8%  Similarity=0.035  Sum_probs=136.7

Q ss_pred             eEEEEEcccC--CcEEEEEEcCCCEEEEEE-C--CCeEEEEe-CCCcEEEEEeC-CCCCEEEEEEeCCCeEEEEECCCeE
Q psy7057          70 QCKLTIRQHE--MAVWGVIQLANGIIVTGC-A--DKTIKLHS-EEGEFLKTLTG-HTDCVRGLAVLNDTDFVSCSNDASI  142 (557)
Q Consensus        70 ~~~~~l~~h~--~~V~~l~~~~~~~l~sgs-~--dg~I~vwd-~~~~~~~~l~~-h~~~V~~l~~~~~~~lvs~s~Dg~I  142 (557)
                      +.+.++. |.  .....+.|++++.|..++ .  ++.|++.| .+++.+..+.- .......+++..+..+++.-.++.+
T Consensus        10 ~vv~~~p-~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~v   88 (266)
T 2iwa_A           10 EVLNEFP-HDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNIG   88 (266)
T ss_dssp             EEEEEEE-CCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSEE
T ss_pred             eEEEEEE-CCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCEE
Confidence            4455553 54  346899999988444443 3  58999999 56777777652 2223345666643334566678999


Q ss_pred             EEEECCCCeEEEEEeCCCCcEEEEEEcCCEEEEEeCCCeEEEEECCCC---ceEeeC-----CccEEEEEEcCCCcEEEE
Q psy7057         143 RVWDSTTGKCVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQ---NSFMIP-----AMSVWAVAILPNSDIVTG  214 (557)
Q Consensus       143 ~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~-----~~~v~~v~~~p~g~l~sg  214 (557)
                      .++|..+.+.+.++......-+.++.+++.++++..++.|.++|..+.   ..+...     -..++.+.+. ++.+.+.
T Consensus        89 ~viD~~t~~v~~~i~~g~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn  167 (266)
T 2iwa_A           89 FIYDRRTLSNIKNFTHQMKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWAN  167 (266)
T ss_dssp             EEEETTTTEEEEEEECCSSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEE
T ss_pred             EEEECCCCcEEEEEECCCCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEe
Confidence            999999999999986321333568888877776667899999998775   233221     1236778887 6775544


Q ss_pred             E-cCCcEEEEecCCCCcchhHHHhc-----------ccceeEEEeccCCCceeEEEEeCCCcEEEEecCCC
Q psy7057         215 S-SDGIVRVFSANPDRQAEDAVQAQ-----------YAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPD  273 (557)
Q Consensus       215 ~-~Dg~I~iwd~~~~~~~~~~~~~~-----------~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~  273 (557)
                      . .++.|.+.|..+++.........           .......+.+.+.....++++...+.|.+.++.+.
T Consensus       168 ~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~  238 (266)
T 2iwa_A          168 IWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV  238 (266)
T ss_dssp             ETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred             cCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence            4 57899999999887643222111           11345778888888888899999999999887654

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=98.12  E-value=0.0001  Score=75.25  Aligned_cols=207  Identities=8%  Similarity=-0.003  Sum_probs=125.8

Q ss_pred             eEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEE----------CCCeEEEEe-CCCcEEEEEeCC-------CC
Q psy7057          60 TAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGC----------ADKTIKLHS-EEGEFLKTLTGH-------TD  120 (557)
Q Consensus        60 ~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs----------~dg~I~vwd-~~~~~~~~l~~h-------~~  120 (557)
                      +|.++|..+++.+.++.....+  .+.++|++ .++.+.          .++.|.+|| .+++.+.++...       ..
T Consensus        47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~  124 (368)
T 1mda_H           47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGP  124 (368)
T ss_dssp             EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSC
T ss_pred             eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCC
Confidence            8889999999999998766666  79999998 555554          378899999 677778877533       12


Q ss_pred             CEEEEEEeCCCe-EEEEEC--CCeEEE--EECCCCeEEEEEeCCC------------------CcEEEEE----------
Q psy7057         121 CVRGLAVLNDTD-FVSCSN--DASIRV--WDSTTGKCVHTMYGHP------------------NFIYSVA----------  167 (557)
Q Consensus       121 ~V~~l~~~~~~~-lvs~s~--Dg~I~v--wd~~~~~~~~~~~~h~------------------~~V~~l~----------  167 (557)
                      ....+.++|+++ ++.+..  +..+.+  +|+.+   +.++....                  +.+..+.          
T Consensus       125 ~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~  201 (368)
T 1mda_H          125 RVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGI  201 (368)
T ss_dssp             CTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEE
T ss_pred             CcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCe
Confidence            456789999987 555553  467888  98765   33332100                  0000011          


Q ss_pred             -----------------E-cCCEEEEEeCCCeEEEEECCCC-ceEee----C-------C---ccEEEEEEcCCCc-EEE
Q psy7057         168 -----------------A-HGDLITSGGEDQCVCVYQNKAQ-NSFMI----P-------A---MSVWAVAILPNSD-IVT  213 (557)
Q Consensus       168 -----------------~-~~~~l~s~s~Dg~I~iwd~~~~-~~~~~----~-------~---~~v~~v~~~p~g~-l~s  213 (557)
                                       . ++..++..+. +.+.+.|.... ..+..    .       .   .....++++|+++ ++.
T Consensus       202 v~~~~t~~i~vg~~P~~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV  280 (368)
T 1mda_H          202 VGAQCTGAQNCSSQAAQANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMI  280 (368)
T ss_dssp             CCCCSCTTSCBCSCCEEETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEE
T ss_pred             EEEEeeeeeeCCCCccccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEE
Confidence                             1 1111222222 44555554321 11100    0       0   0011267999987 544


Q ss_pred             EEc---------CCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEe-CCCcEEEEecCCChh
Q psy7057         214 GSS---------DGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVS-DDGIVRVFSANPDRQ  275 (557)
Q Consensus       214 g~~---------Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s-~DG~IrvW~~~~~~~  275 (557)
                      +..         ++.+.++|..+.+........   .....+.+.++....+++.. .++.|.|+|+.+.+.
T Consensus       281 ~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg---~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kv  349 (368)
T 1mda_H          281 LTVEHSRSCLAAAENTSSVTASVGQTSGPISNG---HDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQD  349 (368)
T ss_dssp             EEEECSSCTTSCEEEEEEEESSSCCEEECCEEE---EEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEE
T ss_pred             EeccccCcccccCCCEEEEECCCCeEEEEEECC---CCcceEEECCCCCEEEEEccCCCCeEEEEECCCCcE
Confidence            322         235669999987765433222   24566777777766677777 699999999887643

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=98.05  E-value=4.8e-05  Score=77.60  Aligned_cols=217  Identities=11%  Similarity=-0.004  Sum_probs=130.3

Q ss_pred             cEEEEEeccCcccEEEEEEcCCCc-EEEEE----------CCCcEEEEcCCC-----------------------CCCCC
Q psy7057           2 YKLSTALYGHSMDVRSLSVTPDGC-ILSAS----------RDKSAKLWKPND-----------------------LSPGA   47 (557)
Q Consensus         2 ~kl~~~l~gH~~~V~~l~~spdg~-l~sgs----------~Dg~V~iWd~~~-----------------------~~~~~   47 (557)
                      +++..++..-..+  .++++||++ ++.+.          .+++|.+||+.+                       +.+++
T Consensus        56 ~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~Sp  133 (368)
T 1mda_H           56 GVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCA  133 (368)
T ss_dssp             TEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECT
T ss_pred             CeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcC
Confidence            5667777654456  799999998 66554          478899999876                       23456


Q ss_pred             CCCEEEEEEC--CCeEEE--EECCCCeEEEEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEeCCC------cEEE--
Q psy7057          48 KVNTLLSASW--DMTAKL--WCLESQQCKLTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHSEEG------EFLK--  113 (557)
Q Consensus        48 ~~~~l~sgs~--Dg~i~i--wd~~~~~~~~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~~~------~~~~--  113 (557)
                      ++++++++..  +..+.+  +|+.+   +.++..- ..   ....|++  .+++.+.|+.+.+.+...      +.+.  
T Consensus       134 DGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~-~~---~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~  206 (368)
T 1mda_H          134 SSACLLFFLFGSSAAAGLSVPGASD---DQLTKSA-SC---FHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQC  206 (368)
T ss_dssp             TSSCEEEEECSSSCEEEEEETTTEE---EEEEECS-SC---CCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCS
T ss_pred             CCCEEEEEccCCCCeEEEEEEchhh---ceEEECC-Cc---eEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEe
Confidence            7888888875  356888  88766   3444311 11   1122333  566677788877777443      1111  


Q ss_pred             --EEeCCCCCEEEEEEeCCCeEEEEECCCeEEEEECCCC--eEEEEEeC------------CCCcEEEEEEcCCEEEEEe
Q psy7057         114 --TLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTG--KCVHTMYG------------HPNFIYSVAAHGDLITSGG  177 (557)
Q Consensus       114 --~l~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~--~~~~~~~~------------h~~~V~~l~~~~~~l~s~s  177 (557)
                        .+.-...+.   .....+.++..+. +.+.+.|+.+.  +.+..+.-            +......+..+++.++.+.
T Consensus       207 t~~i~vg~~P~---~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~  282 (368)
T 1mda_H          207 TGAQNCSSQAA---QANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILT  282 (368)
T ss_dssp             CTTSCBCSCCE---EETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEE
T ss_pred             eeeeeCCCCcc---ccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEe
Confidence              011112233   3333455665556 89999998643  23332211            1111123444777666543


Q ss_pred             C---------CCeEEEEECCCCceEeeC--CccEEEEEEcCCCc--EEEEE-cCCcEEEEecCCCCcc
Q psy7057         178 E---------DQCVCVYQNKAQNSFMIP--AMSVWAVAILPNSD--IVTGS-SDGIVRVFSANPDRQA  231 (557)
Q Consensus       178 ~---------Dg~I~iwd~~~~~~~~~~--~~~v~~v~~~p~g~--l~sg~-~Dg~I~iwd~~~~~~~  231 (557)
                      .         +..+.++|+.+.+.+...  ....+.++++|+++  +++.. .++.|.++|..+.+..
T Consensus       283 ~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv  350 (368)
T 1mda_H          283 VEHSRSCLAAAENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQ  350 (368)
T ss_dssp             EECSSCTTSCEEEEEEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEE
T ss_pred             ccccCcccccCCCEEEEECCCCeEEEEEECCCCcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEE
Confidence            2         235669998777433221  22588999999997  55666 5999999999987654

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=98.05  E-value=0.00054  Score=70.83  Aligned_cols=181  Identities=11%  Similarity=0.023  Sum_probs=118.2

Q ss_pred             CCCCEEE-EEECCCeEEEEECCCC----eEEEEEc------c-cCCcEEEEEEcCCCEEEEEECC------CeEEEEe-C
Q psy7057          47 AKVNTLL-SASWDMTAKLWCLESQ----QCKLTIR------Q-HEMAVWGVIQLANGIIVTGCAD------KTIKLHS-E  107 (557)
Q Consensus        47 ~~~~~l~-sgs~Dg~i~iwd~~~~----~~~~~l~------~-h~~~V~~l~~~~~~~l~sgs~d------g~I~vwd-~  107 (557)
                      .+.++|+ ++..+++|.++|+.+.    +...++.      . .......+.++|+|+++++..+      +.+.+.| .
T Consensus        93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdGi~Vs~~g~~~g~~~g~v~vlD~~  172 (462)
T 2ece_A           93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDAIYISALGNEEGEGPGGILMLDHY  172 (462)
T ss_dssp             CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSCEEEEEEEETTSCSCCEEEEECTT
T ss_pred             ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCeEEEEcCCCcCCCCCCeEEEEECC
Confidence            4555555 4667889999998765    6666673      1 1224556788899966666555      7899999 5


Q ss_pred             CCcEEEEEeCCC---CCEEEEEEeCCCeEE-EEE-------------------CCCeEEEEECCCCeEEEEEeCC-C-Cc
Q psy7057         108 EGEFLKTLTGHT---DCVRGLAVLNDTDFV-SCS-------------------NDASIRVWDSTTGKCVHTMYGH-P-NF  162 (557)
Q Consensus       108 ~~~~~~~l~~h~---~~V~~l~~~~~~~lv-s~s-------------------~Dg~I~vwd~~~~~~~~~~~~h-~-~~  162 (557)
                      +.+.+.++..-.   ..-..+.|+|++.++ +..                   .+.+|.+||+.+++.+.++.-- . ..
T Consensus       173 T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~  252 (462)
T 2ece_A          173 SFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRM  252 (462)
T ss_dssp             TCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEE
T ss_pred             CCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCc
Confidence            578887776221   223457889997744 443                   2789999999999888888742 1 34


Q ss_pred             EEEEEE----cCCEEEEEe------CCCeEEEEECCCC-----ceEeeC------------------CccEEEEEEcCCC
Q psy7057         163 IYSVAA----HGDLITSGG------EDQCVCVYQNKAQ-----NSFMIP------------------AMSVWAVAILPNS  209 (557)
Q Consensus       163 V~~l~~----~~~~l~s~s------~Dg~I~iwd~~~~-----~~~~~~------------------~~~v~~v~~~p~g  209 (557)
                      .+.+.|    +++++++++      .+++|.+|.....     +.+...                  ......+.++|++
T Consensus       253 P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DG  332 (462)
T 2ece_A          253 ALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDD  332 (462)
T ss_dssp             EEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTS
T ss_pred             cceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCC
Confidence            455555    566655555      5667876542211     111111                  1346789999999


Q ss_pred             c-EE-EEEcCCcEEEEecCC
Q psy7057         210 D-IV-TGSSDGIVRVFSANP  227 (557)
Q Consensus       210 ~-l~-sg~~Dg~I~iwd~~~  227 (557)
                      + |. +.-..+.|.+|++..
T Consensus       333 rfLYVSnrg~d~VavfdV~d  352 (462)
T 2ece_A          333 KFLYLSLWGIGEVRQYDISN  352 (462)
T ss_dssp             CEEEEEETTTTEEEEEECSS
T ss_pred             CEEEEEeCCCCEEEEEEecC
Confidence            9 43 444478999999863

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=98.04  E-value=0.0013  Score=63.26  Aligned_cols=195  Identities=9%  Similarity=0.055  Sum_probs=120.3

Q ss_pred             cEEEEEEcCCC-cEE-EEECCCcEEEEcCCC----------------CCCCCCCCEEEEE-ECCCeEEEEECCCCeEEEE
Q psy7057          14 DVRSLSVTPDG-CIL-SASRDKSAKLWKPND----------------LSPGAKVNTLLSA-SWDMTAKLWCLESQQCKLT   74 (557)
Q Consensus        14 ~V~~l~~spdg-~l~-sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sg-s~Dg~i~iwd~~~~~~~~~   74 (557)
                      .+.+++|++++ .|+ +-...+.|..+++..                +.+++.+..|+.+ ...+.|.++++........
T Consensus        37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~  116 (267)
T 1npe_A           37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVL  116 (267)
T ss_dssp             EEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred             cEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEE
Confidence            45688999865 455 445678899998765                3344444444444 4457888888765332222


Q ss_pred             EcccCCcEEEEEEcCC-CEEEEEEC---CCeEEEEeCCCcEEEEEe-CCCCCEEEEEEeCC-CeE-EEEECCCeEEEEEC
Q psy7057          75 IRQHEMAVWGVIQLAN-GIIVTGCA---DKTIKLHSEEGEFLKTLT-GHTDCVRGLAVLND-TDF-VSCSNDASIRVWDS  147 (557)
Q Consensus        75 l~~h~~~V~~l~~~~~-~~l~sgs~---dg~I~vwd~~~~~~~~l~-~h~~~V~~l~~~~~-~~l-vs~s~Dg~I~vwd~  147 (557)
                      +.........+++.|+ +.|..+..   .+.|..++.++.....+. ..-.....++++++ +.+ ++-...+.|.++|+
T Consensus       117 ~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~  196 (267)
T 1npe_A          117 FDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNP  196 (267)
T ss_dssp             ECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred             EECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEec
Confidence            2222356789999994 55555544   368888887766544443 23356889999986 454 46666789999998


Q ss_pred             CCCeEEEEEeCCCCcEEEEEEcCCEEEEEe-CCCeEEEEECCCCc---eEeeCC-ccEEEEEEcCCC
Q psy7057         148 TTGKCVHTMYGHPNFIYSVAAHGDLITSGG-EDQCVCVYQNKAQN---SFMIPA-MSVWAVAILPNS  209 (557)
Q Consensus       148 ~~~~~~~~~~~h~~~V~~l~~~~~~l~s~s-~Dg~I~iwd~~~~~---~~~~~~-~~v~~v~~~p~g  209 (557)
                      ........+.. ......++.++..|+.+. ..+.|..+|..+.+   .+.... ...+.+++.|++
T Consensus       197 ~g~~~~~~~~~-~~~P~gi~~d~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~~  262 (267)
T 1npe_A          197 AQPGRRKVLEG-LQYPFAVTSYGKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIALSQ  262 (267)
T ss_dssp             TEEEEEEEEEC-CCSEEEEEEETTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEECSC
T ss_pred             CCCceEEEecC-CCCceEEEEeCCEEEEEECCCCeEEEEeCCCCCceEEEccccccccceeeecCcc
Confidence            75443333332 234467777666555554 56899999977653   232221 135667777665

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=97.97  E-value=0.0003  Score=77.79  Aligned_cols=170  Identities=10%  Similarity=0.076  Sum_probs=112.2

Q ss_pred             CCcEEEEECCCcEEEEcCCC--------CC-----------------CCCCCCEEEEEECCCeEEEEECCCCeEEEEEcc
Q psy7057          23 DGCILSASRDKSAKLWKPND--------LS-----------------PGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQ   77 (557)
Q Consensus        23 dg~l~sgs~Dg~V~iWd~~~--------~~-----------------~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~   77 (557)
                      ++.++.++.++.|.-+|..+        ..                 +.-.+..++.++.|+.|..+|..+|+.+..+..
T Consensus        66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~  145 (668)
T 1kv9_A           66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLDGRLIALDAKTGKAIWSQQT  145 (668)
T ss_dssp             TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred             CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcCCCEEEEEECCCCCEeeeecc
Confidence            45677788888888888765        00                 001256788999999999999999999887764


Q ss_pred             cC----CcEEEEEEcCCCEEEEEEC------CCeEEEEe-CCCcEEEEEeCC---CC-----------------------
Q psy7057          78 HE----MAVWGVIQLANGIIVTGCA------DKTIKLHS-EEGEFLKTLTGH---TD-----------------------  120 (557)
Q Consensus        78 h~----~~V~~l~~~~~~~l~sgs~------dg~I~vwd-~~~~~~~~l~~h---~~-----------------------  120 (557)
                      ..    ..+.+.-...++.++.++.      ++.|..+| .+|+.+..+...   ..                       
T Consensus       146 ~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~  225 (668)
T 1kv9_A          146 TDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKL  225 (668)
T ss_dssp             SCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHH
T ss_pred             CCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeee
Confidence            21    1111100012566666543      58999999 688888776521   00                       


Q ss_pred             -----CEEEEEEeCC-CeEEEEECCC-------------------eEEEEECCCCeEEEEEeC--CC-------CcE--E
Q psy7057         121 -----CVRGLAVLND-TDFVSCSNDA-------------------SIRVWDSTTGKCVHTMYG--HP-------NFI--Y  164 (557)
Q Consensus       121 -----~V~~l~~~~~-~~lvs~s~Dg-------------------~I~vwd~~~~~~~~~~~~--h~-------~~V--~  164 (557)
                           ....+++.++ +.++.++.++                   .|..+|..+|+.+-.++.  |.       ...  .
T Consensus       226 ~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~  305 (668)
T 1kv9_A          226 GGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLA  305 (668)
T ss_dssp             CEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEE
T ss_pred             CCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEE
Confidence                 1123577776 4555666655                   499999999999988864  22       222  2


Q ss_pred             EEEEcCC---EEEEEeCCCeEEEEECCCCce
Q psy7057         165 SVAAHGD---LITSGGEDQCVCVYQNKAQNS  192 (557)
Q Consensus       165 ~l~~~~~---~l~s~s~Dg~I~iwd~~~~~~  192 (557)
                      .+.++++   .++.++.+|.++++|..+.+.
T Consensus       306 d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~  336 (668)
T 1kv9_A          306 ELNIDGKPRKVLMQAPKNGFFYVLDRTNGKL  336 (668)
T ss_dssp             EEEETTEEEEEEEECCTTSEEEEEETTTCCE
T ss_pred             EeccCCcEEEEEEEECCCCEEEEEECCCCCE
Confidence            3344665   688999999999999776643

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=97.97  E-value=0.00088  Score=64.33  Aligned_cols=186  Identities=7%  Similarity=-0.048  Sum_probs=123.4

Q ss_pred             EEEEEcccC--CcEEEEEEcCCCEEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCeEEEEECCCeEEEEEC
Q psy7057          71 CKLTIRQHE--MAVWGVIQLANGIIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDS  147 (557)
Q Consensus        71 ~~~~l~~h~--~~V~~l~~~~~~~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~  147 (557)
                      .+.++ .|.  .....+.|..+.++++.+.++.|+++| .+++.+..+.....---.+++..+..+++.-.++.+.++|.
T Consensus        45 Vv~~~-phd~~~ftqGL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~  123 (268)
T 3nok_A           45 IIREY-PHATNAFTQGLVFHQGHFFESTGHQGTLRQLSLESAQPVWMERLGNIFAEGLASDGERLYQLTWTEGLLFTWSG  123 (268)
T ss_dssp             EEEEE-ECCTTCCEEEEEEETTEEEEEETTTTEEEECCSSCSSCSEEEECTTCCEEEEEECSSCEEEEESSSCEEEEEET
T ss_pred             EEEEE-cCCCccccceEEEECCEEEEEcCCCCEEEEEECCCCcEEeEECCCCcceeEEEEeCCEEEEEEccCCEEEEEEC
Confidence            44445 353  455788888544888888999999999 56666666522111223466655444556667899999999


Q ss_pred             CCCeEEEEEeCCCCcEEEEEEcCCEEEEEeCCCeEEEEECCCCc---eEee--CC---ccEEEEEEcCCCcEEEEE-cCC
Q psy7057         148 TTGKCVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQN---SFMI--PA---MSVWAVAILPNSDIVTGS-SDG  218 (557)
Q Consensus       148 ~~~~~~~~~~~h~~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~~~---~~~~--~~---~~v~~v~~~p~g~l~sg~-~Dg  218 (557)
                      .+.+.+.++... ..-+.++.++..|+.+..++.|.++|..+.+   .+..  ..   ..++.+.+. +|++.+.. .+.
T Consensus       124 ~Tl~~~~ti~~~-~eGwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~  201 (268)
T 3nok_A          124 MPPQRERTTRYS-GEGWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSS  201 (268)
T ss_dssp             TTTEEEEEEECS-SCCCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCS
T ss_pred             CcCcEEEEEeCC-CceeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCC
Confidence            999999999853 3346788888888877779999999977662   2222  11   245667776 77755555 578


Q ss_pred             cEEEEecCCCCcchhHHHh-----------cccceeEEEeccCCCceeEEEE
Q psy7057         219 IVRVFSANPDRQAEDAVQA-----------QYAEEVKKLKSANEQEIGGVKV  259 (557)
Q Consensus       219 ~I~iwd~~~~~~~~~~~~~-----------~~~~~v~~l~~~~~~~~~~vs~  259 (557)
                      .|.+.|..+++........           ........+++.+.....++||
T Consensus       202 ~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG  253 (268)
T 3nok_A          202 DVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG  253 (268)
T ss_dssp             EEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred             eEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence            9999999988764322111           1123456677776666666665

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=97.95  E-value=0.0014  Score=62.87  Aligned_cols=165  Identities=9%  Similarity=-0.007  Sum_probs=106.6

Q ss_pred             CCEEEEEECCC--eEEEEECCCCeEEEEEcccCCc-EEEEEEcCCCEEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEE
Q psy7057          49 VNTLLSASWDM--TAKLWCLESQQCKLTIRQHEMA-VWGVIQLANGIIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRG  124 (557)
Q Consensus        49 ~~~l~sgs~Dg--~i~iwd~~~~~~~~~l~~h~~~-V~~l~~~~~~~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~  124 (557)
                      +.++.+.+.+|  .|+++|+++++.+..+...... --.++...+.+.++.-.++.+.++| .+.+.+.++.-.. .=+.
T Consensus        53 ~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~-eG~g  131 (262)
T 3nol_A           53 GYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDG-EGWG  131 (262)
T ss_dssp             TEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEEEECSS-CCCC
T ss_pred             CEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEEEECCC-CceE
Confidence            44555666655  8999999999988877644322 2345554444555555688999999 5678888776432 2234


Q ss_pred             EEEeCCCeEEEEECCCeEEEEECCCCeEEEEEeCC--C---CcEEEEEE-cCCEEEEEeCCCeEEEEECCCCc---eEee
Q psy7057         125 LAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGH--P---NFIYSVAA-HGDLITSGGEDQCVCVYQNKAQN---SFMI  195 (557)
Q Consensus       125 l~~~~~~~lvs~s~Dg~I~vwd~~~~~~~~~~~~h--~---~~V~~l~~-~~~~l~s~s~Dg~I~iwd~~~~~---~~~~  195 (557)
                      ++.. ...++.+..+++|.++|..+.+.+.++.-.  .   ..+..+.+ +|..++..-.+..|.+.|..+.+   .+..
T Consensus       132 lt~d-g~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lyan~w~~~~I~vIDp~tG~V~~~Id~  210 (262)
T 3nol_A          132 LTHN-DQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIFANVWQTNKIVRIDPETGKVTGIIDL  210 (262)
T ss_dssp             EEEC-SSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEEEEETTSSEEEEECTTTCBEEEEEEC
T ss_pred             EecC-CCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEEEEEccCCeEEEEECCCCcEEEEEEC
Confidence            4432 244555555788999999999988887532  1   33445666 66555555568899999977662   2222


Q ss_pred             C------------CccEEEEEEcCCCc-EEEEE
Q psy7057         196 P------------AMSVWAVAILPNSD-IVTGS  215 (557)
Q Consensus       196 ~------------~~~v~~v~~~p~g~-l~sg~  215 (557)
                      .            ....+.+|++|+++ |++.|
T Consensus       211 ~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG  243 (262)
T 3nol_A          211 NGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG  243 (262)
T ss_dssp             TTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred             CcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence            1            23568999999887 54444

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=97.95  E-value=0.002  Score=63.92  Aligned_cols=186  Identities=9%  Similarity=0.005  Sum_probs=106.8

Q ss_pred             cEEEEEEcC-CCEEEEEECCCeEEEEeCCCcEEEEEeCC-----CCCEEEEEEeC-CCeEEEEEC---------------
Q psy7057          81 AVWGVIQLA-NGIIVTGCADKTIKLHSEEGEFLKTLTGH-----TDCVRGLAVLN-DTDFVSCSN---------------  138 (557)
Q Consensus        81 ~V~~l~~~~-~~~l~sgs~dg~I~vwd~~~~~~~~l~~h-----~~~V~~l~~~~-~~~lvs~s~---------------  138 (557)
                      .+.++++.+ ++.|+.+...+.|..+|..+..+..+...     ......+++.+ ++.+..+..               
T Consensus        81 ~p~gi~~~~~~g~l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~  160 (322)
T 2fp8_A           81 RTYDISYNLQNNQLYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDT  160 (322)
T ss_dssp             CEEEEEEETTTTEEEEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHH
T ss_pred             CCceEEEcCCCCcEEEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcc
Confidence            578899997 77777776667788888665444333211     13478899999 888664432               


Q ss_pred             ---CCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEE-eCCCeEEEEECCCC-----ceEeeCCccEEEEEEcC
Q psy7057         139 ---DASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSG-GEDQCVCVYQNKAQ-----NSFMIPAMSVWAVAILP  207 (557)
Q Consensus       139 ---Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~-s~Dg~I~iwd~~~~-----~~~~~~~~~v~~v~~~p  207 (557)
                         ++.|..+|..+++....... -.....|++  +++.|+.+ +..+.|.+|+....     ..+..... ...+++.+
T Consensus       161 ~~~~g~v~~~d~~~~~~~~~~~~-~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~  238 (322)
T 2fp8_A          161 SDKTGRLIKYDPSTKETTLLLKE-LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNA  238 (322)
T ss_dssp             TCCCEEEEEEETTTTEEEEEEEE-ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECT
T ss_pred             cCCCceEEEEeCCCCEEEEeccC-CccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECC
Confidence               36788899776664332221 122345677  56655544 56689999996531     22222223 77899999


Q ss_pred             CCcEEEEEc-----------CCcEEEEecCCCCcchhHHHh-cc-cceeEEEeccCCCceeEEEEeCCCcEEEEecC
Q psy7057         208 NSDIVTGSS-----------DGIVRVFSANPDRQAEDAVQA-QY-AEEVKKLKSANEQEIGGVKVSDDGIVRVFSAN  271 (557)
Q Consensus       208 ~g~l~sg~~-----------Dg~I~iwd~~~~~~~~~~~~~-~~-~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~  271 (557)
                      +|.+.++..           .+.|..++... +........ .. ...+..+..  ......++....+.|.++++.
T Consensus       239 ~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G-~~~~~~~~~~g~~~~~~~~~~~--~~g~L~v~~~~~~~i~~~~~~  312 (322)
T 2fp8_A          239 DGHFWVSSSEELDGNMHGRVDPKGIKFDEFG-NILEVIPLPPPFAGEHFEQIQE--HDGLLYIGTLFHGSVGILVYD  312 (322)
T ss_dssp             TSCEEEEEEEETTSSTTSCEEEEEEEECTTS-CEEEEEECCTTTTTSCCCEEEE--ETTEEEEECSSCSEEEEEEC-
T ss_pred             CCCEEEEecCcccccccCCCccEEEEECCCC-CEEEEEECCCCCccccceEEEE--eCCEEEEeecCCCceEEEecc
Confidence            998554443           35677777542 222111110 00 112223322  233344555677788888765

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=97.94  E-value=0.0012  Score=65.45  Aligned_cols=212  Identities=11%  Similarity=0.051  Sum_probs=125.3

Q ss_pred             ccEEEEEEcCCCc-EEEEECCCcEEEEcCCC--C---------------------------------CCCCCCCEEEEEE
Q psy7057          13 MDVRSLSVTPDGC-ILSASRDKSAKLWKPND--L---------------------------------SPGAKVNTLLSAS   56 (557)
Q Consensus        13 ~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~--~---------------------------------~~~~~~~~l~sgs   56 (557)
                      ..-.++++.++|. ++++..++.|..|+...  +                                 .+++....|+.+.
T Consensus        19 ~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d   98 (322)
T 2fp8_A           19 YAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVD   98 (322)
T ss_dssp             SCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEE
T ss_pred             CCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEE
Confidence            3456788999998 88888899999998754  1                                 1222234566666


Q ss_pred             CCCeEEEEECCCCeEEEEEcc-----cCCcEEEEEEcC-CCEEEEEEC------------------CCeEEEEeCCCcEE
Q psy7057          57 WDMTAKLWCLESQQCKLTIRQ-----HEMAVWGVIQLA-NGIIVTGCA------------------DKTIKLHSEEGEFL  112 (557)
Q Consensus        57 ~Dg~i~iwd~~~~~~~~~l~~-----h~~~V~~l~~~~-~~~l~sgs~------------------dg~I~vwd~~~~~~  112 (557)
                      ..+.+..++..++.. ..+..     .......+++.+ +|.|..+..                  ++.|..+|..+..+
T Consensus        99 ~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~  177 (322)
T 2fp8_A           99 CYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKET  177 (322)
T ss_dssp             TTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEE
T ss_pred             CCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEE
Confidence            566677888765432 22211     123578899999 884444432                  36688888654333


Q ss_pred             EEEeCCCCCEEEEEEeCCCe-EE-EEECCCeEEEEECCCCe--EEEEEeCCCCcEEEEEE--cCCEEEEEeC--------
Q psy7057         113 KTLTGHTDCVRGLAVLNDTD-FV-SCSNDASIRVWDSTTGK--CVHTMYGHPNFIYSVAA--HGDLITSGGE--------  178 (557)
Q Consensus       113 ~~l~~h~~~V~~l~~~~~~~-lv-s~s~Dg~I~vwd~~~~~--~~~~~~~h~~~V~~l~~--~~~~l~s~s~--------  178 (557)
                      ..+...-.....|++++++. ++ +-+..+.|.++++....  ....+....+ ...+++  +|+++++...        
T Consensus       178 ~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~  256 (322)
T 2fp8_A          178 TLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGNMHG  256 (322)
T ss_dssp             EEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTSSTTS
T ss_pred             EEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCcccccccC
Confidence            33322223456789999975 44 44566899999986421  1112211223 667777  5666555544        


Q ss_pred             --CCeEEEEECCCC--ceEeeCC----ccEEEEEEcCCCcEE-EEEcCCcEEEEecCC
Q psy7057         179 --DQCVCVYQNKAQ--NSFMIPA----MSVWAVAILPNSDIV-TGSSDGIVRVFSANP  227 (557)
Q Consensus       179 --Dg~I~iwd~~~~--~~~~~~~----~~v~~v~~~p~g~l~-sg~~Dg~I~iwd~~~  227 (557)
                        .+.|..+|....  ..+..+.    ..+.++++ .++.|+ +....+.|.++++..
T Consensus       257 ~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~  313 (322)
T 2fp8_A          257 RVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDK  313 (322)
T ss_dssp             CEEEEEEEECTTSCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC--
T ss_pred             CCccEEEEECCCCCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEeccc
Confidence              466888885432  3333332    24556665 456644 444678888888754

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=97.93  E-value=0.0039  Score=59.86  Aligned_cols=186  Identities=10%  Similarity=-0.016  Sum_probs=113.3

Q ss_pred             CCCCCCCCEEEEE-ECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCC-C-EEEEEECCCeEEEEeCCCcEEEEEeC-C
Q psy7057          43 LSPGAKVNTLLSA-SWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLAN-G-IIVTGCADKTIKLHSEEGEFLKTLTG-H  118 (557)
Q Consensus        43 ~~~~~~~~~l~sg-s~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~-~-~l~sgs~dg~I~vwd~~~~~~~~l~~-h  118 (557)
                      +.+++.++.|+.+ ...+.|..+++........+.........+++.++ + ++++-...+.|.+++.++.....+.. .
T Consensus        41 i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~  120 (267)
T 1npe_A           41 LAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTG  120 (267)
T ss_dssp             EEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSS
T ss_pred             EEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECC
Confidence            3444445555544 45689999998765543333333357789999985 4 45555567889999977654444332 2


Q ss_pred             CCCEEEEEEeCC-CeEEEEEC---CCeEEEEECCCCeEEEEEe-CCCCcEEEEEEc--CCEE-EEEeCCCeEEEEECCCC
Q psy7057         119 TDCVRGLAVLND-TDFVSCSN---DASIRVWDSTTGKCVHTMY-GHPNFIYSVAAH--GDLI-TSGGEDQCVCVYQNKAQ  190 (557)
Q Consensus       119 ~~~V~~l~~~~~-~~lvs~s~---Dg~I~vwd~~~~~~~~~~~-~h~~~V~~l~~~--~~~l-~s~s~Dg~I~iwd~~~~  190 (557)
                      ......++++|+ +.+..+..   .+.|..+++.. +....+. ..-.....++++  +..| ++-...+.|.+++....
T Consensus       121 ~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg-~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~  199 (267)
T 1npe_A          121 LVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG-TNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQP  199 (267)
T ss_dssp             CSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTS-CCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEE
T ss_pred             CCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCC-CCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCC
Confidence            256789999995 66554443   36888888753 3233332 233456788883  4554 55556789999997644


Q ss_pred             --ceEeeCCccEEEEEEcCCCcEE-EEEcCCcEEEEecCCCCc
Q psy7057         191 --NSFMIPAMSVWAVAILPNSDIV-TGSSDGIVRVFSANPDRQ  230 (557)
Q Consensus       191 --~~~~~~~~~v~~v~~~p~g~l~-sg~~Dg~I~iwd~~~~~~  230 (557)
                        ..+.........+++. .+.++ +....+.|.+++..+++.
T Consensus       200 ~~~~~~~~~~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g~~  241 (267)
T 1npe_A          200 GRRKVLEGLQYPFAVTSY-GKNLYYTDWKTNSVIAMDLAISKE  241 (267)
T ss_dssp             EEEEEEECCCSEEEEEEE-TTEEEEEETTTTEEEEEETTTTEE
T ss_pred             ceEEEecCCCCceEEEEe-CCEEEEEECCCCeEEEEeCCCCCc
Confidence              2222222334566664 34444 444568899998876543

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=97.90  E-value=0.0014  Score=62.88  Aligned_cols=185  Identities=9%  Similarity=0.052  Sum_probs=119.6

Q ss_pred             EEEEEcccC--CcEEEEEEcCCC-EEEEEECCC--eEEEEe-CCCcEEEEEeCCCCC-EEEEEEeCCCeEEEEECCCeEE
Q psy7057          71 CKLTIRQHE--MAVWGVIQLANG-IIVTGCADK--TIKLHS-EEGEFLKTLTGHTDC-VRGLAVLNDTDFVSCSNDASIR  143 (557)
Q Consensus        71 ~~~~l~~h~--~~V~~l~~~~~~-~l~sgs~dg--~I~vwd-~~~~~~~~l~~h~~~-V~~l~~~~~~~lvs~s~Dg~I~  143 (557)
                      .+.++ .|.  .....+.|+ ++ ++.+.+.+|  .|+++| .+++.+..+.-.... --.+++..+..+++.-.++.+.
T Consensus        33 vv~~~-phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~  110 (262)
T 3nol_A           33 IVHSY-PHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGF  110 (262)
T ss_dssp             EEEEE-ECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEE
T ss_pred             EEEEe-cCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEE
Confidence            44555 354  445788888 56 677777766  899999 577777776543322 2335555433344555689999


Q ss_pred             EEECCCCeEEEEEeCCCCcEEEEEEcCCEEEEEeCCCeEEEEECCCC---ceEeeC--C---ccEEEEEEcCCCcEEEEE
Q psy7057         144 VWDSTTGKCVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQ---NSFMIP--A---MSVWAVAILPNSDIVTGS  215 (557)
Q Consensus       144 vwd~~~~~~~~~~~~h~~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~--~---~~v~~v~~~p~g~l~sg~  215 (557)
                      ++|..+.+.+.++.... .-+.++.++..|+.+..++.|.++|..+.   ..+...  .   ..++.+.+. +|++.+..
T Consensus       111 v~D~~t~~~~~ti~~~~-eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~  188 (262)
T 3nol_A          111 VWNIRNLRQVRSFNYDG-EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANV  188 (262)
T ss_dssp             EEETTTCCEEEEEECSS-CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEE
T ss_pred             EEECccCcEEEEEECCC-CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEE
Confidence            99999999999997433 33677788887777666888999997766   233221  1   234556776 67755555


Q ss_pred             -cCCcEEEEecCCCCcchhHHHhcc----------cceeEEEeccCCCceeEEEE
Q psy7057         216 -SDGIVRVFSANPDRQAEDAVQAQY----------AEEVKKLKSANEQEIGGVKV  259 (557)
Q Consensus       216 -~Dg~I~iwd~~~~~~~~~~~~~~~----------~~~v~~l~~~~~~~~~~vs~  259 (557)
                       .++.|.+.|..+++..........          ......+++.+.....+++|
T Consensus       189 w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG  243 (262)
T 3nol_A          189 WQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG  243 (262)
T ss_dssp             TTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred             ccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence             588899999988876433222111          12345666666666555655

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=97.87  E-value=0.0016  Score=70.51  Aligned_cols=168  Identities=9%  Similarity=0.050  Sum_probs=105.3

Q ss_pred             CCcEEEEEC-CCcEEEEcC-CC--------CC-----------------CCCCCCEEEEEECCCeEEEEECCCCeEEEEE
Q psy7057          23 DGCILSASR-DKSAKLWKP-ND--------LS-----------------PGAKVNTLLSASWDMTAKLWCLESQQCKLTI   75 (557)
Q Consensus        23 dg~l~sgs~-Dg~V~iWd~-~~--------~~-----------------~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l   75 (557)
                      ++.++.++. ++.|.-+|. .+        +.                 +.-.+..++.++.|+.+..+|..+|+.+...
T Consensus        62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~l~alD~~tG~~~W~~  141 (571)
T 2ad6_A           62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQANGHLLALDAKTGKINWEV  141 (571)
T ss_dssp             TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred             CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeCCCEEEEEECCCCCEEEEe
Confidence            455666666 777777777 44        10                 0012567888999999999999999988776


Q ss_pred             cccC----CcEEEEEEcCCCEEEEEEC------CCeEEEEe-CCCcEEEEEeCCCCC-----------------------
Q psy7057          76 RQHE----MAVWGVIQLANGIIVTGCA------DKTIKLHS-EEGEFLKTLTGHTDC-----------------------  121 (557)
Q Consensus        76 ~~h~----~~V~~l~~~~~~~l~sgs~------dg~I~vwd-~~~~~~~~l~~h~~~-----------------------  121 (557)
                      ....    ..+.+--...++.++.++.      ++.|..+| .+|+.+.++......                       
T Consensus       142 ~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~  221 (571)
T 2ad6_A          142 EVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGT  221 (571)
T ss_dssp             ECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHH
T ss_pred             cCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCccccccccccccccccc
Confidence            5321    0121100012566666665      78999999 578887776532110                       


Q ss_pred             --------------E-EEEEEeCC-CeEEEEECC----------------CeEEEEECCCCeEEEEEeCC--C-------
Q psy7057         122 --------------V-RGLAVLND-TDFVSCSND----------------ASIRVWDSTTGKCVHTMYGH--P-------  160 (557)
Q Consensus       122 --------------V-~~l~~~~~-~~lvs~s~D----------------g~I~vwd~~~~~~~~~~~~h--~-------  160 (557)
                                    + ..+++.++ +.++.++.+                +.|..+|..+|+.+-.++..  .       
T Consensus       222 ~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~  301 (571)
T 2ad6_A          222 KTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGV  301 (571)
T ss_dssp             HTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCC
T ss_pred             ccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccC
Confidence                          0 12455554 455444432                36999999999998887632  1       


Q ss_pred             -CcEE-EEEEcCC---EEEEEeCCCeEEEEECCCC
Q psy7057         161 -NFIY-SVAAHGD---LITSGGEDQCVCVYQNKAQ  190 (557)
Q Consensus       161 -~~V~-~l~~~~~---~l~s~s~Dg~I~iwd~~~~  190 (557)
                       .++. ....+++   .++.++.+|.++++|..+.
T Consensus       302 ~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG  336 (571)
T 2ad6_A          302 NQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENG  336 (571)
T ss_dssp             CCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTC
T ss_pred             CCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCC
Confidence             2222 2222563   5778889999999997665

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=97.86  E-value=0.0083  Score=56.90  Aligned_cols=155  Identities=10%  Similarity=-0.003  Sum_probs=101.4

Q ss_pred             CeEEEEECCCCeEEEEEcccCC-cEEEEEEcCCCEEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCeEEEE
Q psy7057          59 MTAKLWCLESQQCKLTIRQHEM-AVWGVIQLANGIIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTDFVSC  136 (557)
Q Consensus        59 g~i~iwd~~~~~~~~~l~~h~~-~V~~l~~~~~~~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~lvs~  136 (557)
                      ..|+.+|+.+++.+..+..... .--.++...+.+.+..-.++.+.++| .+.+.+.++.... .-+.++.. .+.|+.+
T Consensus        43 S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~-~Gwglt~d-g~~L~vS  120 (243)
T 3mbr_X           43 SSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPRARFRYPG-EGWALTSD-DSHLYMS  120 (243)
T ss_dssp             CEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTTEEEEEEECSS-CCCEEEEC-SSCEEEE
T ss_pred             ceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEEEEEeCCC-CceEEeeC-CCEEEEE
Confidence            4788888888888877754332 22345555444555566789999999 5677787776433 23555543 3446655


Q ss_pred             ECCCeEEEEECCCCeEEEEEeCC--C---CcEEEEEE-cCCEEEEEeCCCeEEEEECCCCce---Eee------------
Q psy7057         137 SNDASIRVWDSTTGKCVHTMYGH--P---NFIYSVAA-HGDLITSGGEDQCVCVYQNKAQNS---FMI------------  195 (557)
Q Consensus       137 s~Dg~I~vwd~~~~~~~~~~~~h--~---~~V~~l~~-~~~~l~s~s~Dg~I~iwd~~~~~~---~~~------------  195 (557)
                      ..++.|.++|..+.+.+.++.-.  .   ..+..+.+ ++..++..-.+..|.+.|..+.+.   +..            
T Consensus       121 dgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~  200 (243)
T 3mbr_X          121 DGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTD  200 (243)
T ss_dssp             CSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCC
T ss_pred             CCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccC
Confidence            56889999999999988887632  1   34556677 565555555677899999776622   221            


Q ss_pred             -CCccEEEEEEcCCCc-EEEEE
Q psy7057         196 -PAMSVWAVAILPNSD-IVTGS  215 (557)
Q Consensus       196 -~~~~v~~v~~~p~g~-l~sg~  215 (557)
                       .....+.+++.|+++ |++.+
T Consensus       201 ~~~~vlNGIA~d~~~~~lfVTG  222 (243)
T 3mbr_X          201 STNDVLNGIAFDAEHDRLFVTG  222 (243)
T ss_dssp             TTSSCEEEEEEETTTTEEEEEE
T ss_pred             CcCCceEEEEEcCCCCEEEEEC
Confidence             123568999999877 44443

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=97.85  E-value=0.0017  Score=67.22  Aligned_cols=193  Identities=11%  Similarity=0.041  Sum_probs=124.2

Q ss_pred             CCCc--EEEEECCCcEEEEcCCC---------------------------CCCCCCCCEEEEEECC------CeEEEEEC
Q psy7057          22 PDGC--ILSASRDKSAKLWKPND---------------------------LSPGAKVNTLLSASWD------MTAKLWCL   66 (557)
Q Consensus        22 pdg~--l~sgs~Dg~V~iWd~~~---------------------------~~~~~~~~~l~sgs~D------g~i~iwd~   66 (557)
                      ++++  ++++-.+++|.+.|+.+                           +...+++ .++++..+      +.+.+.|.
T Consensus        93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~  171 (462)
T 2ece_A           93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH  171 (462)
T ss_dssp             CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred             ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence            7776  55778899999999863                           2344667 77776665      78999999


Q ss_pred             CCCeEEEEEcccCC---cEEEEEEcCCC-EEEEEE-------------------CCCeEEEEeC-CCcEEEEEeCC--CC
Q psy7057          67 ESQQCKLTIRQHEM---AVWGVIQLANG-IIVTGC-------------------ADKTIKLHSE-EGEFLKTLTGH--TD  120 (557)
Q Consensus        67 ~~~~~~~~l~~h~~---~V~~l~~~~~~-~l~sgs-------------------~dg~I~vwd~-~~~~~~~l~~h--~~  120 (557)
                      ++.+.+.++.....   .-..+.|+|++ .+++..                   .+.+|.+||. +++.+.++..-  ..
T Consensus       172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~  251 (462)
T 2ece_A          172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENR  251 (462)
T ss_dssp             TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEE
T ss_pred             CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCC
Confidence            99999988863322   23347788988 666664                   2689999995 45566666542  23


Q ss_pred             CEEEEEE--eCCCe--EEEEE-----CCCeEEEEECCCCe--EEEEE--eCC----------------CCcEEEEEE--c
Q psy7057         121 CVRGLAV--LNDTD--FVSCS-----NDASIRVWDSTTGK--CVHTM--YGH----------------PNFIYSVAA--H  169 (557)
Q Consensus       121 ~V~~l~~--~~~~~--lvs~s-----~Dg~I~vwd~~~~~--~~~~~--~~h----------------~~~V~~l~~--~  169 (557)
                      ....+.|  +|+++  ++++-     .+++|.+|....++  .++.+  ...                ......|.+  +
T Consensus       252 ~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~D  331 (462)
T 2ece_A          252 MALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLD  331 (462)
T ss_dssp             EEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTT
T ss_pred             ccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCC
Confidence            4556666  88887  44555     67788877654443  22221  110                123455555  7


Q ss_pred             CCEEEEEe-CCCeEEEEECCCC------ceEeeCC--------------ccEEEEEEcCCCc-EEEEE
Q psy7057         170 GDLITSGG-EDQCVCVYQNKAQ------NSFMIPA--------------MSVWAVAILPNSD-IVTGS  215 (557)
Q Consensus       170 ~~~l~s~s-~Dg~I~iwd~~~~------~~~~~~~--------------~~v~~v~~~p~g~-l~sg~  215 (557)
                      +++|.++. ..+.|.+||+...      ..+....              ..-..++++|+|+ ++++.
T Consensus       332 GrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN  399 (462)
T 2ece_A          332 DKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN  399 (462)
T ss_dssp             SCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred             CCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence            88766555 5789999996422      1221110              1357899999998 55555

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=97.82  E-value=0.0053  Score=58.26  Aligned_cols=187  Identities=8%  Similarity=0.010  Sum_probs=120.9

Q ss_pred             eEEEEEccc--CCcEEEEEEcCCCEEEEEECCC--eEEEEe-CCCcEEEEEeCCCCC-EEEEEEeCCCeEEEEECCCeEE
Q psy7057          70 QCKLTIRQH--EMAVWGVIQLANGIIVTGCADK--TIKLHS-EEGEFLKTLTGHTDC-VRGLAVLNDTDFVSCSNDASIR  143 (557)
Q Consensus        70 ~~~~~l~~h--~~~V~~l~~~~~~~l~sgs~dg--~I~vwd-~~~~~~~~l~~h~~~-V~~l~~~~~~~lvs~s~Dg~I~  143 (557)
                      +.+.++ .|  ......+.|+++.++.+.+.+|  .|+.+| .+++.+....-.... --.+++..+..++..-.++.+.
T Consensus        10 ~v~~~~-phd~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~   88 (243)
T 3mbr_X           10 RVVKRY-PHDTTAFTEGLFYLRGHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGF   88 (243)
T ss_dssp             EEEEEE-ECCTTCCEEEEEEETTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEE
T ss_pred             EEEEEc-CCCCccccccEEEECCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEE
Confidence            344555 45  3567789998744677777654  899999 577777776533322 2345555433355666789999


Q ss_pred             EEECCCCeEEEEEeCCCCcEEEEEEcCCEEEEEeCCCeEEEEECCCC---ceEeeC--C---ccEEEEEEcCCCcEEEEE
Q psy7057         144 VWDSTTGKCVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQ---NSFMIP--A---MSVWAVAILPNSDIVTGS  215 (557)
Q Consensus       144 vwd~~~~~~~~~~~~h~~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~--~---~~v~~v~~~p~g~l~sg~  215 (557)
                      ++|..+.+.+.++... ..-+.++.++..|+.+..++.|.++|..+.   .++...  .   ..++.+.+. +|++.+..
T Consensus        89 v~D~~tl~~~~ti~~~-~~Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanv  166 (243)
T 3mbr_X           89 VYDLATLTPRARFRYP-GEGWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANV  166 (243)
T ss_dssp             EEETTTTEEEEEEECS-SCCCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEE
T ss_pred             EEECCcCcEEEEEeCC-CCceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEE
Confidence            9999999999999843 334688887777776667899999997766   233221  1   244556655 67755555


Q ss_pred             -cCCcEEEEecCCCCcchhHHHhc-----------ccceeEEEeccCCCceeEEEE
Q psy7057         216 -SDGIVRVFSANPDRQAEDAVQAQ-----------YAEEVKKLKSANEQEIGGVKV  259 (557)
Q Consensus       216 -~Dg~I~iwd~~~~~~~~~~~~~~-----------~~~~v~~l~~~~~~~~~~vs~  259 (557)
                       .+..|.+.|..+++.........           .......+++.+.....++||
T Consensus       167 w~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG  222 (243)
T 3mbr_X          167 WLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG  222 (243)
T ss_dssp             TTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred             CCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence             57889999998887653322211           112445666666655555665

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=97.75  E-value=0.0026  Score=61.10  Aligned_cols=165  Identities=13%  Similarity=0.042  Sum_probs=110.4

Q ss_pred             CCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCCEEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEE
Q psy7057          49 VNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAV  127 (557)
Q Consensus        49 ~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~  127 (557)
                      +.++++.+.+|.|+++|+++++.+..+......-..++...+.+.++.-.++.+.++| .+.+.+.++... ..-+.++.
T Consensus        65 ~~Ly~stG~~g~v~~iD~~Tgkv~~~~l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~-~eGwGLt~  143 (268)
T 3nok_A           65 GHFFESTGHQGTLRQLSLESAQPVWMERLGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERTTRYS-GEGWGLCY  143 (268)
T ss_dssp             TEEEEEETTTTEEEECCSSCSSCSEEEECTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEEEECS-SCCCCEEE
T ss_pred             CEEEEEcCCCCEEEEEECCCCcEEeEECCCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEEeCC-CceeEEec
Confidence            4566677778899999999998777662122223446666555666666789999999 567778777642 22345554


Q ss_pred             eCCCeEEEEECCCeEEEEECCCCeEEEEEeC--CC---CcEEEEEE-cCCEEEEEeCCCeEEEEECCCCce---Eee---
Q psy7057         128 LNDTDFVSCSNDASIRVWDSTTGKCVHTMYG--HP---NFIYSVAA-HGDLITSGGEDQCVCVYQNKAQNS---FMI---  195 (557)
Q Consensus       128 ~~~~~lvs~s~Dg~I~vwd~~~~~~~~~~~~--h~---~~V~~l~~-~~~~l~s~s~Dg~I~iwd~~~~~~---~~~---  195 (557)
                      . ...|+.+..+++|.++|..+.+.+.++.-  +.   ..+..+.+ +|..++..-.+..|.+.|..+.+.   +..   
T Consensus       144 D-g~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L  222 (268)
T 3nok_A          144 W-NGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYANIWHSSDVLEIDPATGTVVGVIDASAL  222 (268)
T ss_dssp             E-TTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTCSEEEEECTTTCBEEEEEECHHH
T ss_pred             C-CCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEEEECCCCeEEEEeCCCCcEEEEEECCCC
Confidence            3 24566555689999999999998888763  22   24466777 666555555678999999776622   211   


Q ss_pred             ----------CCccEEEEEEcCCCc-EEEEE
Q psy7057         196 ----------PAMSVWAVAILPNSD-IVTGS  215 (557)
Q Consensus       196 ----------~~~~v~~v~~~p~g~-l~sg~  215 (557)
                                .....+.+++.|+++ |++.+
T Consensus       223 ~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG  253 (268)
T 3nok_A          223 TRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG  253 (268)
T ss_dssp             HHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred             cccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence                      123578999999877 44443

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=97.70  E-value=0.0028  Score=69.93  Aligned_cols=135  Identities=7%  Similarity=0.021  Sum_probs=90.1

Q ss_pred             CCcEEEEECCCcEEEEcCCC--------C---------CCCC--CCCEEEEEEC------CCeEEEEECCCCeEEEEEcc
Q psy7057          23 DGCILSASRDKSAKLWKPND--------L---------SPGA--KVNTLLSASW------DMTAKLWCLESQQCKLTIRQ   77 (557)
Q Consensus        23 dg~l~sgs~Dg~V~iWd~~~--------~---------~~~~--~~~~l~sgs~------Dg~i~iwd~~~~~~~~~l~~   77 (557)
                      +++++.++.|+.|..+|..+        .         ...|  .+..++.++.      ++.|..+|..+|+.+.++..
T Consensus       117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~  196 (668)
T 1kv9_A          117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYT  196 (668)
T ss_dssp             BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred             CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecc
Confidence            34577888899999998876        1         0011  2355666543      58999999999999888753


Q ss_pred             c--C-----------------------------CcEEEEEEcCCC-EEEEEECCC-------------------eEEEEe
Q psy7057          78 H--E-----------------------------MAVWGVIQLANG-IIVTGCADK-------------------TIKLHS  106 (557)
Q Consensus        78 h--~-----------------------------~~V~~l~~~~~~-~l~sgs~dg-------------------~I~vwd  106 (557)
                      .  .                             .....+++.++. +++.++.++                   .|..+|
T Consensus       197 ~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD  276 (668)
T 1kv9_A          197 VPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIR  276 (668)
T ss_dssp             SCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEEC
T ss_pred             cCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEc
Confidence            1  0                             011235677754 777777766                   388899


Q ss_pred             -CCCcEEEEEeC--CC-------CCEEEEEEeCCCe----EEEEECCCeEEEEECCCCeEEEEEe
Q psy7057         107 -EEGEFLKTLTG--HT-------DCVRGLAVLNDTD----FVSCSNDASIRVWDSTTGKCVHTMY  157 (557)
Q Consensus       107 -~~~~~~~~l~~--h~-------~~V~~l~~~~~~~----lvs~s~Dg~I~vwd~~~~~~~~~~~  157 (557)
                       .+|+.+..+..  |.       .+.....+..++.    ++.++.+|.+.++|..+|+.+....
T Consensus       277 ~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~  341 (668)
T 1kv9_A          277 PDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEK  341 (668)
T ss_dssp             TTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEE
T ss_pred             CCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEecccc
Confidence             67888777763  32       2222223333553    7789999999999999999885543

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=97.70  E-value=0.025  Score=55.45  Aligned_cols=211  Identities=13%  Similarity=0.051  Sum_probs=123.1

Q ss_pred             EEEEEeccCcccEEEEEEcCCCcEEEEE-CCCcEEEEcCCC--------------CCCCCCCCEEEEEECCC--eEEEEE
Q psy7057           3 KLSTALYGHSMDVRSLSVTPDGCILSAS-RDKSAKLWKPND--------------LSPGAKVNTLLSASWDM--TAKLWC   65 (557)
Q Consensus         3 kl~~~l~gH~~~V~~l~~spdg~l~sgs-~Dg~V~iWd~~~--------------~~~~~~~~~l~sgs~Dg--~i~iwd   65 (557)
                      ++...+..+ .....++|+++|+|+.+. .++.|..||...              +.+.++++++++.....  .|..++
T Consensus        23 ~~~~~~p~~-~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~~~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d  101 (306)
T 2p4o_A           23 KIITSFPVN-TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLV  101 (306)
T ss_dssp             EEEEEECTT-CCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEE
T ss_pred             eEeEeCCCC-CCcceEEECCCCCEEEEeCCCCeEEEECCCCceEEEEeCCCCceeEEEcCCCcEEEEeccCCcceEEEEc
Confidence            455566543 567889999999865554 788999998765              55666777665554332  466677


Q ss_pred             CCCCeEEEEEc-ccCCcEEEEEEcCCCE-EEEEECCCeEEEEeCCCc--EEEEEe---------CCCCCEEEEEEeCCCe
Q psy7057          66 LESQQCKLTIR-QHEMAVWGVIQLANGI-IVTGCADKTIKLHSEEGE--FLKTLT---------GHTDCVRGLAVLNDTD  132 (557)
Q Consensus        66 ~~~~~~~~~l~-~h~~~V~~l~~~~~~~-l~sgs~dg~I~vwd~~~~--~~~~l~---------~h~~~V~~l~~~~~~~  132 (557)
                      ..+++...... ........++..+++. +++-..++.|.++|....  .+....         ..-.....|  ++++.
T Consensus       102 ~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~  179 (306)
T 2p4o_A          102 KSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGN  179 (306)
T ss_dssp             CTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETT
T ss_pred             CCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCC
Confidence            77776543222 1223345555566664 444445888888885432  121111         111235555  56653


Q ss_pred             --EEEEECCCeEEEEECCC-CeE--EEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC-ceE---eeCCccEE
Q psy7057         133 --FVSCSNDASIRVWDSTT-GKC--VHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ-NSF---MIPAMSVW  201 (557)
Q Consensus       133 --lvs~s~Dg~I~vwd~~~-~~~--~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~-~~~---~~~~~~v~  201 (557)
                        +++-+..+.|..+++.. ++.  ...+.. ......+++  +|+++++....+.|.+++.... ..+   ........
T Consensus       180 ~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~G~~~~~~~~~~~~~~p~  258 (306)
T 2p4o_A          180 FLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNLYGATHIYNSVVRIAPDRSTTIIAQAEQGVIGST  258 (306)
T ss_dssp             EEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCEEEECBTTCCEEEECTTCCEEEEECGGGTCTTEE
T ss_pred             EEEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCCEEEEeCCCCeEEEECCCCCEEEEeecccccCCce
Confidence              44666778999999864 321  111111 122334555  6777777677889999996532 222   12234688


Q ss_pred             EEEEc---CCCc-EEEEEcC
Q psy7057         202 AVAIL---PNSD-IVTGSSD  217 (557)
Q Consensus       202 ~v~~~---p~g~-l~sg~~D  217 (557)
                      +++|.   |++. |++++..
T Consensus       259 ~~a~~g~~~d~~~LyVt~~~  278 (306)
T 2p4o_A          259 AVAFGQTEGDCTAIYVVTNG  278 (306)
T ss_dssp             EEEECCSTTTTTEEEEEECT
T ss_pred             EEEEecccCCCCEEEEECCC
Confidence            99998   7765 5544443

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=97.65  E-value=0.0033  Score=68.23  Aligned_cols=139  Identities=12%  Similarity=0.079  Sum_probs=89.9

Q ss_pred             EEEEECCCeEEEEECCCCeEEEEEcccCC----cEEEEEEcCCCEEEEEE------CCCeEEEEe-CCCcEEEEEeCCCC
Q psy7057          52 LLSASWDMTAKLWCLESQQCKLTIRQHEM----AVWGVIQLANGIIVTGC------ADKTIKLHS-EEGEFLKTLTGHTD  120 (557)
Q Consensus        52 l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~----~V~~l~~~~~~~l~sgs------~dg~I~vwd-~~~~~~~~l~~h~~  120 (557)
                      |+.++.|+.+..+|..+|+.+........    .+.+--...++.++.++      .++.|+.+| .+|+.+..+.....
T Consensus       124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~  203 (599)
T 1w6s_A          124 ILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGP  203 (599)
T ss_dssp             EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSC
T ss_pred             EEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCC
Confidence            88889999999999999998877643220    11111011256666665      389999999 67888777653221


Q ss_pred             C-------------------------------------EE-EEEEeCC-CeEEEEECC----------------CeEEEE
Q psy7057         121 C-------------------------------------VR-GLAVLND-TDFVSCSND----------------ASIRVW  145 (557)
Q Consensus       121 ~-------------------------------------V~-~l~~~~~-~~lvs~s~D----------------g~I~vw  145 (557)
                      .                                     ++ .+++.+. +.++.++.+                +.|.-+
T Consensus       204 ~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Al  283 (599)
T 1w6s_A          204 DKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGR  283 (599)
T ss_dssp             HHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEE
T ss_pred             ccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEE
Confidence            1                                     11 2345554 555555544                489999


Q ss_pred             ECCCCeEEEEEeCCC----------CcEE-EEE-EcC---CEEEEEeCCCeEEEEECCCC
Q psy7057         146 DSTTGKCVHTMYGHP----------NFIY-SVA-AHG---DLITSGGEDQCVCVYQNKAQ  190 (557)
Q Consensus       146 d~~~~~~~~~~~~h~----------~~V~-~l~-~~~---~~l~s~s~Dg~I~iwd~~~~  190 (557)
                      |..+|+.+-.++...          .++. .+. .++   ..++.++.+|.++++|..+.
T Consensus       284 d~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG  343 (599)
T 1w6s_A          284 DADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDG  343 (599)
T ss_dssp             ETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTC
T ss_pred             eCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCC
Confidence            999999988876422          1222 222 246   46777889999999997665

>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}

Probab=97.64  E-value=0.062  Score=53.33  Aligned_cols=251  Identities=10%  Similarity=0.042  Sum_probs=133.1

Q ss_pred             cccEEEEEEcCCCcEEEEECCCcEEEEcCCC------CCCC---CC---------CCEEEEEECCCeEEEEECCCCeEEE
Q psy7057          12 SMDVRSLSVTPDGCILSASRDKSAKLWKPND------LSPG---AK---------VNTLLSASWDMTAKLWCLESQQCKL   73 (557)
Q Consensus        12 ~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~------~~~~---~~---------~~~l~sgs~Dg~i~iwd~~~~~~~~   73 (557)
                      ...+.+|.|.+++.++.++..|.|... .+.      +...   +.         .+.++.++..+.|.. ....++.-.
T Consensus        35 ~~~~~~v~~~~~~~~~~~G~~g~i~~s-~DgG~tW~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~g~i~~-S~DgG~tW~  112 (327)
T 2xbg_A           35 TATILDMSFIDRHHGWLVGVNATLMET-RDGGQTWEPRTLVLDHSDYRFNSVSFQGNEGWIVGEPPIMLH-TTDGGQSWS  112 (327)
T ss_dssp             SSCEEEEEESSSSCEEEEETTTEEEEE-SSTTSSCEECCCCCSCCCCEEEEEEEETTEEEEEEETTEEEE-ESSTTSSCE
T ss_pred             CCcEEEEEECCCCcEEEEcCCCeEEEe-CCCCCCCeECCCCCCCCCccEEEEEecCCeEEEEECCCeEEE-ECCCCCCce
Confidence            457999999887775446677765432 111      1110   01         122333334443322 222222111


Q ss_pred             EEc---ccCCcEEEEEEcCCCEEEEEECCCeEEEEeCCCc-EEEEEeCCCCCEEEEEEeCCCeEEEEECCCeEEE-EEC-
Q psy7057          74 TIR---QHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGE-FLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRV-WDS-  147 (557)
Q Consensus        74 ~l~---~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~~~~-~~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~I~v-wd~-  147 (557)
                      .+.   .+...+..+.+.+++.++.++.++.|..-.-.|+ -.....++...+.++.+.+++.++..+.++.+.. +|- 
T Consensus       113 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~g  192 (327)
T 2xbg_A          113 QIPLDPKLPGSPRLIKALGNGSAEMITNVGAIYRTKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPG  192 (327)
T ss_dssp             ECCCCTTCSSCEEEEEEEETTEEEEEETTCCEEEESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTT
T ss_pred             ECccccCCCCCeEEEEEECCCCEEEEeCCccEEEEcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCC
Confidence            111   2334577788777775555556665543322232 2233345566789999999888776666666544 442 


Q ss_pred             -CCCeEEEEEeCCCCcEEEEEE-cCCEEEEEeCCCeEEEEECCCC---ceEeeC----CccEEEEEEcCCCcEEEEEcCC
Q psy7057         148 -TTGKCVHTMYGHPNFIYSVAA-HGDLITSGGEDQCVCVYQNKAQ---NSFMIP----AMSVWAVAILPNSDIVTGSSDG  218 (557)
Q Consensus       148 -~~~~~~~~~~~h~~~V~~l~~-~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~----~~~v~~v~~~p~g~l~sg~~Dg  218 (557)
                       .+.+.+.  ......+..+.+ ....++.++.+|.+++.+....   ..+...    ...+.++++.+++.+++++.++
T Consensus       193 G~tW~~~~--~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g  270 (327)
T 2xbg_A          193 QTAWEPHN--RTTSRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAG  270 (327)
T ss_dssp             CSSCEEEE--CCSSSCEEEEEECTTSCEEEEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEESTT
T ss_pred             CCceeECC--CCCCCccceeEECCCCCEEEEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeCCC
Confidence             3344442  245567788888 2234556677888887742212   222211    2358899999888877777788


Q ss_pred             cEEEEecCCCCcchhHH-HhcccceeEEEeccCCCceeEEEEeCCCcEEEEe
Q psy7057         219 IVRVFSANPDRQAEDAV-QAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFS  269 (557)
Q Consensus       219 ~I~iwd~~~~~~~~~~~-~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~  269 (557)
                      .| .+..+.++.-.... .......+..+.+.+  ...+++++.+|.|.-++
T Consensus       271 ~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~--~~~~~~~G~~G~i~~~~  319 (327)
T 2xbg_A          271 AL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFS--PDQGFILGQKGILLRYV  319 (327)
T ss_dssp             CE-EEESSTTSSCEECGGGTTSSSCCCEEEEEE--TTEEEEECSTTEEEEEC
T ss_pred             eE-EEeCCCCcccEEcCccCCCCCCeEEEEEEC--CCceEEEcCCceEEEEc
Confidence            77 34444443221111 101122334444432  22367788899776665

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=97.47  E-value=0.016  Score=62.61  Aligned_cols=168  Identities=8%  Similarity=0.082  Sum_probs=103.2

Q ss_pred             CCcEEEEECCCcEEEEcCCC--------CCC---------------CCCCCEEEEEECCCeEEEEECCCCeEEEEEcccC
Q psy7057          23 DGCILSASRDKSAKLWKPND--------LSP---------------GAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHE   79 (557)
Q Consensus        23 dg~l~sgs~Dg~V~iWd~~~--------~~~---------------~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~   79 (557)
                      +++++.++.++.|.-+|..+        ...               .-.+..++.++.|+.|..+|..+|+.+.......
T Consensus        68 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~  147 (582)
T 1flg_A           68 DGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTLDASVVALNKNTGKVVWKKKFAD  147 (582)
T ss_dssp             TTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEETTTEEEEEESSSCCEEEEEECSC
T ss_pred             CCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeCCCEEEEEECCCCCEEeeecCCC
Confidence            55666666644477777655        100               0125678899999999999999999887765432


Q ss_pred             C----cEEE-EEEcCC---C--EEEEEEC------CCeEEEEe-CCCcEEEEEeCCCCCE--------------------
Q psy7057          80 M----AVWG-VIQLAN---G--IIVTGCA------DKTIKLHS-EEGEFLKTLTGHTDCV--------------------  122 (557)
Q Consensus        80 ~----~V~~-l~~~~~---~--~l~sgs~------dg~I~vwd-~~~~~~~~l~~h~~~V--------------------  122 (557)
                      .    .+.+ -....+   +  .+++++.      ++.|..+| .+|+.+.........+                    
T Consensus       148 ~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~  227 (582)
T 1flg_A          148 HGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWP  227 (582)
T ss_dssp             GGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCTTSC
T ss_pred             CCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCcccccccccccccCC
Confidence            1    1110 111112   2  6666653      78999999 5788776553211000                    


Q ss_pred             ---------------------EEEEEeCC-CeEEEEEC--------------------C----CeEEEEECCCCeEEEEE
Q psy7057         123 ---------------------RGLAVLND-TDFVSCSN--------------------D----ASIRVWDSTTGKCVHTM  156 (557)
Q Consensus       123 ---------------------~~l~~~~~-~~lvs~s~--------------------D----g~I~vwd~~~~~~~~~~  156 (557)
                                           ..+++.|+ +.++.++.                    |    +.|.-+|..+|+.+-.+
T Consensus       228 ~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~  307 (582)
T 1flg_A          228 DDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFY  307 (582)
T ss_dssp             BCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEE
T ss_pred             CccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEE
Confidence                                 12345555 45544442                    2    68999999999999887


Q ss_pred             eC--CC--------CcEEE-EE-EcCC---EEEEEeCCCeEEEEECCCC
Q psy7057         157 YG--HP--------NFIYS-VA-AHGD---LITSGGEDQCVCVYQNKAQ  190 (557)
Q Consensus       157 ~~--h~--------~~V~~-l~-~~~~---~l~s~s~Dg~I~iwd~~~~  190 (557)
                      +.  |.        .++.. .. .+++   .++.++.+|.++++|..+.
T Consensus       308 q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG  356 (582)
T 1flg_A          308 QHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNG  356 (582)
T ss_dssp             ESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTC
T ss_pred             eCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCC
Confidence            53  32        12221 11 2453   6888999999999997665

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=97.42  E-value=0.022  Score=61.45  Aligned_cols=134  Identities=10%  Similarity=0.029  Sum_probs=86.3

Q ss_pred             CCcEEEEECCCcEEEEcCCC--------C---------CCCC--CCCEEEEEEC------CCeEEEEECCCCeEEEEEcc
Q psy7057          23 DGCILSASRDKSAKLWKPND--------L---------SPGA--KVNTLLSASW------DMTAKLWCLESQQCKLTIRQ   77 (557)
Q Consensus        23 dg~l~sgs~Dg~V~iWd~~~--------~---------~~~~--~~~~l~sgs~------Dg~i~iwd~~~~~~~~~l~~   77 (557)
                      +++++.++.|+.|..+|..+        +         ...|  .+..++.++.      ++.|..+|..+++.+.++..
T Consensus       115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~  194 (571)
T 2ad6_A          115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFA  194 (571)
T ss_dssp             TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred             CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEcc
Confidence            45577788888888888765        1         1111  2456777665      79999999999999887754


Q ss_pred             cCCc-------------------------------------E-EEEEEcCC-CEEEEEECC----------------CeE
Q psy7057          78 HEMA-------------------------------------V-WGVIQLAN-GIIVTGCAD----------------KTI  102 (557)
Q Consensus        78 h~~~-------------------------------------V-~~l~~~~~-~~l~sgs~d----------------g~I  102 (557)
                      ....                                     + ..+++.++ +.+..++.+                +.|
T Consensus       195 ~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v  274 (571)
T 2ad6_A          195 TGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTI  274 (571)
T ss_dssp             SSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEE
T ss_pred             CCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEE
Confidence            2211                                     0 12455554 466555532                358


Q ss_pred             EEEe-CCCcEEEEEeC--CC--------CCEEEEEEeCCCe----EEEEECCCeEEEEECCCCeEEEEEe
Q psy7057         103 KLHS-EEGEFLKTLTG--HT--------DCVRGLAVLNDTD----FVSCSNDASIRVWDSTTGKCVHTMY  157 (557)
Q Consensus       103 ~vwd-~~~~~~~~l~~--h~--------~~V~~l~~~~~~~----lvs~s~Dg~I~vwd~~~~~~~~~~~  157 (557)
                      ..+| .+|+.+..+..  |.        .++. +....+++    ++.++.+|.+.++|..+|+.+..+.
T Consensus       275 ~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~  343 (571)
T 2ad6_A          275 WGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEK  343 (571)
T ss_dssp             EEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred             EEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeec
Confidence            8888 57888777653  21        1221 22223563    5578889999999999999887765

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=97.38  E-value=0.13  Score=50.69  Aligned_cols=212  Identities=9%  Similarity=-0.075  Sum_probs=121.9

Q ss_pred             CCeEEEEECCCCeEEEEEcccCCcEEEEEEcCC-C-EEEEEECCCeEEEEeCCC----cEEEE-EeCCCCCEEEEEEeC-
Q psy7057          58 DMTAKLWCLESQQCKLTIRQHEMAVWGVIQLAN-G-IIVTGCADKTIKLHSEEG----EFLKT-LTGHTDCVRGLAVLN-  129 (557)
Q Consensus        58 Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~-~-~l~sgs~dg~I~vwd~~~----~~~~~-l~~h~~~V~~l~~~~-  129 (557)
                      ...|+..++.+.+....+. ....+..++|.+. + ++++-...+.|..++..+    ..... +...-.....+++.+ 
T Consensus         9 ~~~I~~i~~~~~~~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~   87 (316)
T 1ijq_A            9 RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI   87 (316)
T ss_dssp             BSSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETT
T ss_pred             CCeEEEEECCCcceEehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeec
Confidence            3568888988776555444 3456789999975 4 555555678899998665    33222 222234567888885 


Q ss_pred             CCeE-EEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEEc--CCEEEEEeC-C-CeEEEEECCCC--ceEe-eCCccEE
Q psy7057         130 DTDF-VSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAH--GDLITSGGE-D-QCVCVYQNKAQ--NSFM-IPAMSVW  201 (557)
Q Consensus       130 ~~~l-vs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~~--~~~l~s~s~-D-g~I~iwd~~~~--~~~~-~~~~~v~  201 (557)
                      .+.+ ++-...+.|.+.++........+...-.....++++  +..|+.+.. . +.|...++...  ..+. ..-....
T Consensus        88 ~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~~~~P~  167 (316)
T 1ijq_A           88 HSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPN  167 (316)
T ss_dssp             TTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEE
T ss_pred             CCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEECCCCCce
Confidence            4554 465677899999976544333333334566788884  444444443 3 68888886433  2222 2234678


Q ss_pred             EEEEcCCCc-EE-EEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCC
Q psy7057         202 AVAILPNSD-IV-TGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANP  272 (557)
Q Consensus       202 ~v~~~p~g~-l~-sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~  272 (557)
                      .+++.|++. |. +-+..+.|..++.+...................+...  .....++-...+.|..++...
T Consensus       168 gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~--~~~ly~~d~~~~~V~~~~~~~  238 (316)
T 1ijq_A          168 GITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLT  238 (316)
T ss_dssp             EEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTEEEEEETTT
T ss_pred             EEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE--CCEEEEEECCCCeEEEEeCCC
Confidence            999998765 44 4445678999998754322111100011122333332  233345555667777776543

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=97.34  E-value=0.11  Score=49.77  Aligned_cols=194  Identities=13%  Similarity=0.093  Sum_probs=116.5

Q ss_pred             EeccCcccEEEEEEcCCCcEEEEECCCcEEEEcCCCCCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcc-cCCcEEEE
Q psy7057           7 ALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQ-HEMAVWGV   85 (557)
Q Consensus         7 ~l~gH~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~-h~~~V~~l   85 (557)
                      .|.|=.+.+..|+++|++.                        .++++...++.|...|+. ++.+..+.- -....-.|
T Consensus        21 ~l~g~~~~lSGla~~~~~~------------------------~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGI   75 (255)
T 3qqz_A           21 EIAGITNNISSLTWSAQSN------------------------TLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETI   75 (255)
T ss_dssp             ECTTCCSCEEEEEEETTTT------------------------EEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEE
T ss_pred             ECCCcccCcceeEEeCCCC------------------------EEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHe
Confidence            4566667788899988743                        222334445566666665 666655532 23567788


Q ss_pred             EEcCCCEE-EEEECCCeEEEEeC--CCc--EEEEEe------CCCCCEEEEEEeCCC-eEEEEECCCeEEEEECC---CC
Q psy7057          86 IQLANGII-VTGCADKTIKLHSE--EGE--FLKTLT------GHTDCVRGLAVLNDT-DFVSCSNDASIRVWDST---TG  150 (557)
Q Consensus        86 ~~~~~~~l-~sgs~dg~I~vwd~--~~~--~~~~l~------~h~~~V~~l~~~~~~-~lvs~s~Dg~I~vwd~~---~~  150 (557)
                      ++.+++.+ ++.-.++.+.+++.  .+.  .+....      ......-.|++.|.+ +|+++.......+|.+.   ..
T Consensus        76 a~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~  155 (255)
T 3qqz_A           76 EYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSS  155 (255)
T ss_dssp             EECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCS
T ss_pred             EEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccC
Confidence            88888855 44445677888872  232  122221      123457899999986 56655554444444432   11


Q ss_pred             eEEEEEeC-------CCCcEEEEEE---cCCEEEEEeCCCeEEEEECCCC--ceEeeCC---------ccEEEEEEcCCC
Q psy7057         151 KCVHTMYG-------HPNFIYSVAA---HGDLITSGGEDQCVCVYQNKAQ--NSFMIPA---------MSVWAVAILPNS  209 (557)
Q Consensus       151 ~~~~~~~~-------h~~~V~~l~~---~~~~l~s~s~Dg~I~iwd~~~~--~~~~~~~---------~~v~~v~~~p~g  209 (557)
                      ..+..+..       +-..+.++++   .+.+++.....+.|.++|....  ..+....         ...-.|++.++|
T Consensus       156 ~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G  235 (255)
T 3qqz_A          156 NELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASG  235 (255)
T ss_dssp             SCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTC
T ss_pred             CceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCC
Confidence            11222211       2234567777   3457777778888999986544  2222221         256789999999


Q ss_pred             cEEEEEcCCcEEEEec
Q psy7057         210 DIVTGSSDGIVRVFSA  225 (557)
Q Consensus       210 ~l~sg~~Dg~I~iwd~  225 (557)
                      .+...++-+.+++|..
T Consensus       236 ~lyIvsE~n~~y~f~~  251 (255)
T 3qqz_A          236 NIYIVSEPNRFYRFTP  251 (255)
T ss_dssp             CEEEEETTTEEEEEEC
T ss_pred             CEEEEcCCceEEEEEe
Confidence            9877888887777754

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=97.25  E-value=0.0067  Score=66.71  Aligned_cols=213  Identities=12%  Similarity=0.169  Sum_probs=114.6

Q ss_pred             EEEEcC-CCc-EEEEECCC-----------cEEEEcCCC---------------C----CCCCCCCEEEEEEC-CCeEEE
Q psy7057          17 SLSVTP-DGC-ILSASRDK-----------SAKLWKPND---------------L----SPGAKVNTLLSASW-DMTAKL   63 (557)
Q Consensus        17 ~l~~sp-dg~-l~sgs~Dg-----------~V~iWd~~~---------------~----~~~~~~~~l~sgs~-Dg~i~i   63 (557)
                      ++++.+ +++ ++.|+.+.           .+.+||+.+               .    ....++..++.|+. +..+.+
T Consensus       190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~  269 (656)
T 1k3i_A          190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL  269 (656)
T ss_dssp             EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred             eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence            456677 788 56666543           588999876               1    11245778888874 468999


Q ss_pred             EECCCCeEEEEEcccC-CcEEEEEEcCCC-EEEEEE-CC-----CeEEEEeCCCcEEEEEeCC-----CCCEEEEEEeCC
Q psy7057          64 WCLESQQCKLTIRQHE-MAVWGVIQLANG-IIVTGC-AD-----KTIKLHSEEGEFLKTLTGH-----TDCVRGLAVLND  130 (557)
Q Consensus        64 wd~~~~~~~~~l~~h~-~~V~~l~~~~~~-~l~sgs-~d-----g~I~vwd~~~~~~~~l~~h-----~~~V~~l~~~~~  130 (557)
                      ||+.+.+-...-..+. ..-.+++..+++ +++.|+ .+     ..+.+||.....-..+...     ...-....+..+
T Consensus       270 yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~  349 (656)
T 1k3i_A          270 YDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSD  349 (656)
T ss_dssp             EEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTT
T ss_pred             ecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeecC
Confidence            9988765332211111 111244556566 777777 34     5688999554433332100     000000011122


Q ss_pred             Ce-EEEEECC---------CeEEEEECCCCeEEEEEeCCC---------CcEEEEEE---cCCEEEEEeCCC--------
Q psy7057         131 TD-FVSCSND---------ASIRVWDSTTGKCVHTMYGHP---------NFIYSVAA---HGDLITSGGEDQ--------  180 (557)
Q Consensus       131 ~~-lvs~s~D---------g~I~vwd~~~~~~~~~~~~h~---------~~V~~l~~---~~~~l~s~s~Dg--------  180 (557)
                      +. ++.++.+         ..+..||..+.........+.         ..-.++.+   ++++++.|+.++        
T Consensus       350 ~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~  429 (656)
T 1k3i_A          350 NHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATT  429 (656)
T ss_dssp             CSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCC
T ss_pred             CceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCC
Confidence            22 3444433         457888887765443332221         12234443   566777777432        


Q ss_pred             ---eEEEEECCCC--ceEe---eCCccE-EEEEEcCCCc-EEEEEcC-----------CcEEEEecCCCC
Q psy7057         181 ---CVCVYQNKAQ--NSFM---IPAMSV-WAVAILPNSD-IVTGSSD-----------GIVRVFSANPDR  229 (557)
Q Consensus       181 ---~I~iwd~~~~--~~~~---~~~~~v-~~v~~~p~g~-l~sg~~D-----------g~I~iwd~~~~~  229 (557)
                         .|.+||..+.  ..+.   .+.... .++++.|+++ ++.|+.+           ..+.+||..+.+
T Consensus       430 ~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~  499 (656)
T 1k3i_A          430 NAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDT  499 (656)
T ss_dssp             CEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTE
T ss_pred             cceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCc
Confidence               6778886654  2221   122222 3456778888 6677754           468888876543

>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}

Probab=97.19  E-value=0.028  Score=56.54  Aligned_cols=200  Identities=15%  Similarity=0.094  Sum_probs=107.8

Q ss_pred             ccEEEEEEcCCCcEEEEECCCcEEEEcCCC--------------------CCCCCC---CCEEEEEEC-C-----CeEEE
Q psy7057          13 MDVRSLSVTPDGCILSASRDKSAKLWKPND--------------------LSPGAK---VNTLLSASW-D-----MTAKL   63 (557)
Q Consensus        13 ~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~--------------------~~~~~~---~~~l~sgs~-D-----g~i~i   63 (557)
                      ..-+.|+|.|+|+|+.+..+|.|++++ ..                    ++++++   +..|..+.. .     ..|..
T Consensus        31 ~~P~~ia~~pdG~l~V~e~~g~I~~i~-~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r  109 (352)
T 2ism_A           31 EVPWALAFLPDGGMLIAERPGRIRLFR-EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVR  109 (352)
T ss_dssp             SCEEEEEECTTSCEEEEETTTEEEEEE-TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEE
T ss_pred             CCceEEEEcCCCeEEEEeCCCeEEEEE-CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEE
Confidence            356789999999988888889999886 11                    445554   345544433 2     56777


Q ss_pred             EECCCCe-----EEEE-Ec---ccCCcEEEEEEcCCCEEEEEEC--------------CCeEEEEeCCCcE---------
Q psy7057          64 WCLESQQ-----CKLT-IR---QHEMAVWGVIQLANGIIVTGCA--------------DKTIKLHSEEGEF---------  111 (557)
Q Consensus        64 wd~~~~~-----~~~~-l~---~h~~~V~~l~~~~~~~l~sgs~--------------dg~I~vwd~~~~~---------  111 (557)
                      ++...+.     .+.. +.   ........++|.|+|.|..+..              .+.|.-++.++..         
T Consensus       110 ~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~  189 (352)
T 2ism_A          110 LRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLGR  189 (352)
T ss_dssp             EEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTC
T ss_pred             EEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccCC
Confidence            7776431     1222 33   1112335799999994333322              2456666655411         


Q ss_pred             -----EEEEeCCCCCEEEEEEeC-CCeEEEEECC-Ce--------EEEEECCC----------------CeEEEEEeCCC
Q psy7057         112 -----LKTLTGHTDCVRGLAVLN-DTDFVSCSND-AS--------IRVWDSTT----------------GKCVHTMYGHP  160 (557)
Q Consensus       112 -----~~~l~~h~~~V~~l~~~~-~~~lvs~s~D-g~--------I~vwd~~~----------------~~~~~~~~~h~  160 (557)
                           .....+| .....++|+| ++.|.++... ..        |.+.....                ..++..+ .+.
T Consensus       190 ~~~~~~i~a~G~-rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~-~~~  267 (352)
T 2ism_A          190 RGARPEVYSLGH-RNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFW-PQG  267 (352)
T ss_dssp             TTSCTTEEEECC-SEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEEC-TTC
T ss_pred             CCCCccEEEEcC-CCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEec-CCC
Confidence                 1111233 2367788998 5665543322 22        33332110                0122233 223


Q ss_pred             CcEEEEEE-cCCEEEEEeCCCeEEEEECCCC---------ceEeeCCccEEEEEEcCCCcEEEEE
Q psy7057         161 NFIYSVAA-HGDLITSGGEDQCVCVYQNKAQ---------NSFMIPAMSVWAVAILPNSDIVTGS  215 (557)
Q Consensus       161 ~~V~~l~~-~~~~l~s~s~Dg~I~iwd~~~~---------~~~~~~~~~v~~v~~~p~g~l~sg~  215 (557)
                      .....+++ .+..+++.-..+.|...++...         ..+......+..+++.|+|.|..+.
T Consensus       268 ~ap~G~~~~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~  332 (352)
T 2ism_A          268 FPPGNLAFFRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTT  332 (352)
T ss_dssp             CCEEEEEEETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEE
T ss_pred             CCCcceEEECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEE
Confidence            34556776 6666666666677777764322         1121223467888888888844333

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=97.17  E-value=0.12  Score=51.86  Aligned_cols=174  Identities=12%  Similarity=0.041  Sum_probs=107.1

Q ss_pred             cEEEEEEcCCC-cEE-EEECCCcEEEEcCCC----------------CCCCCCCCEE-EEEECCCeEEEEECCCCeEEEE
Q psy7057          14 DVRSLSVTPDG-CIL-SASRDKSAKLWKPND----------------LSPGAKVNTL-LSASWDMTAKLWCLESQQCKLT   74 (557)
Q Consensus        14 ~V~~l~~spdg-~l~-sgs~Dg~V~iWd~~~----------------~~~~~~~~~l-~sgs~Dg~i~iwd~~~~~~~~~   74 (557)
                      ....++|.+.+ .|+ +-...+.|..+++..                +++++.+..| ++-...+.|.+.++........
T Consensus        74 ~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l  153 (349)
T 3v64_C           74 NAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVL  153 (349)
T ss_dssp             CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred             ceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEE
Confidence            46788998654 454 545677888887764                2333333333 4444457788888765443333


Q ss_pred             EcccCCcEEEEEEcCC-C-EEEEEECC-CeEEEEeCCCcEEEEEeC-CCCCEEEEEEeCC-CeEE-EEECCCeEEEEECC
Q psy7057          75 IRQHEMAVWGVIQLAN-G-IIVTGCAD-KTIKLHSEEGEFLKTLTG-HTDCVRGLAVLND-TDFV-SCSNDASIRVWDST  148 (557)
Q Consensus        75 l~~h~~~V~~l~~~~~-~-~l~sgs~d-g~I~vwd~~~~~~~~l~~-h~~~V~~l~~~~~-~~lv-s~s~Dg~I~vwd~~  148 (557)
                      +...-.....+++.|. + ++++-... +.|...+.++.....+.. .-.....|+++++ +.|. +-+..+.|..+|+.
T Consensus       154 ~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~d  233 (349)
T 3v64_C          154 LWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLD  233 (349)
T ss_dssp             ECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred             EeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCC
Confidence            3334456789999984 5 44444444 778888887766555432 3345789999975 5544 55567889999976


Q ss_pred             CCeEEEEEeCCCCcEEEEEEcCC-EEEEEeCCCeEEEEEC
Q psy7057         149 TGKCVHTMYGHPNFIYSVAAHGD-LITSGGEDQCVCVYQN  187 (557)
Q Consensus       149 ~~~~~~~~~~h~~~V~~l~~~~~-~l~s~s~Dg~I~iwd~  187 (557)
                      .......+...-.....|++.+. .+++-...+.|..++.
T Consensus       234 G~~~~~~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~  273 (349)
T 3v64_C          234 GSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANK  273 (349)
T ss_dssp             SCSCEEEECSSCSSEEEEEEETTEEEEEETTTTEEEEEET
T ss_pred             CCceEEEEeCCCCCceEEEEECCEEEEecCCCCeEEEEEc
Confidence            43333333333445567777444 4555556777887773

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=97.16  E-value=0.13  Score=52.43  Aligned_cols=210  Identities=9%  Similarity=0.006  Sum_probs=122.0

Q ss_pred             EEEEcCCCcEEEEECCCcEEEEcCCC---------------CCCCCCCCEEEEE-ECCCeEEEEECCCCeEEEEEcccCC
Q psy7057          17 SLSVTPDGCILSASRDKSAKLWKPND---------------LSPGAKVNTLLSA-SWDMTAKLWCLESQQCKLTIRQHEM   80 (557)
Q Consensus        17 ~l~~spdg~l~sgs~Dg~V~iWd~~~---------------~~~~~~~~~l~sg-s~Dg~i~iwd~~~~~~~~~l~~h~~   80 (557)
                      |.+..+.+ ++..+....|+..++..               +.+++..+.|+.. ...+.|..+++........+.....
T Consensus        81 C~~~~~~~-~l~~~~~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~  159 (386)
T 3v65_B           81 CKALGPEP-VLLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLE  159 (386)
T ss_dssp             EEECSSCC-EEEEECBSCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCS
T ss_pred             ECCccccc-eeEeecCccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCC
Confidence            44444433 33334456677777654               3444444444444 4567788888776554443433333


Q ss_pred             cEEEEEEcC-CC-EEEEEECCCeEEEEeCCCcEEEEEe-CCCCCEEEEEEeCC-CeEE-EEECC-CeEEEEECCCCeEEE
Q psy7057          81 AVWGVIQLA-NG-IIVTGCADKTIKLHSEEGEFLKTLT-GHTDCVRGLAVLND-TDFV-SCSND-ASIRVWDSTTGKCVH  154 (557)
Q Consensus        81 ~V~~l~~~~-~~-~l~sgs~dg~I~vwd~~~~~~~~l~-~h~~~V~~l~~~~~-~~lv-s~s~D-g~I~vwd~~~~~~~~  154 (557)
                      ....+++.+ .+ ++++-...+.|.+.+..+.....+. ..-.....|++.|. +.|+ +-... +.|...++.......
T Consensus       160 ~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~  239 (386)
T 3v65_B          160 SPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRI  239 (386)
T ss_dssp             CCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEE
T ss_pred             CccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEE
Confidence            456778876 34 5566666788988887776544443 33466899999986 5544 44444 678888875433222


Q ss_pred             EEeCCCCcEEEEEEc--CC-EEEEEeCCCeEEEEECCCC--ceEe-eCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCC
Q psy7057         155 TMYGHPNFIYSVAAH--GD-LITSGGEDQCVCVYQNKAQ--NSFM-IPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANP  227 (557)
Q Consensus       155 ~~~~h~~~V~~l~~~--~~-~l~s~s~Dg~I~iwd~~~~--~~~~-~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~  227 (557)
                      .....-.....|+++  +. ++++-+..+.|..++....  ..+. ........+++. .+. +++-...+.|..++..+
T Consensus       240 ~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~~~~~V~~~~~~~  318 (386)
T 3v65_B          240 IADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDWHTKSINSANKFT  318 (386)
T ss_dssp             EECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEEE-TTEEEEEETTTTEEEEEETTT
T ss_pred             EEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEEE-CCEEEEeeCCCCeEEEEECCC
Confidence            222233456778883  44 4455566788999986543  2222 223356677773 344 55555677788877444


Q ss_pred             C
Q psy7057         228 D  228 (557)
Q Consensus       228 ~  228 (557)
                      +
T Consensus       319 G  319 (386)
T 3v65_B          319 G  319 (386)
T ss_dssp             C
T ss_pred             C
Confidence            3

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=97.15  E-value=0.17  Score=49.42  Aligned_cols=181  Identities=13%  Similarity=0.095  Sum_probs=105.8

Q ss_pred             CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCCEEEEEE-C-CC-eEEEEe-CCCcEEEEEe-C
Q psy7057          43 LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGC-A-DK-TIKLHS-EEGEFLKTLT-G  117 (557)
Q Consensus        43 ~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~~l~sgs-~-dg-~I~vwd-~~~~~~~~l~-~  117 (557)
                      +.+++++..+++-..++.|..|+.... ....+. ....+.++++.+++.++.+. . ++ .|..++ .+++...... .
T Consensus        37 ia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~  114 (306)
T 2p4o_A           37 LASAPDGTIFVTNHEVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLP  114 (306)
T ss_dssp             EEECTTSCEEEEETTTTEEEEECTTCC-EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECT
T ss_pred             EEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCC
Confidence            344556776666667889999997653 333332 34578899999988444443 3 22 466666 4555432222 1


Q ss_pred             CCCCEEEEEEeCCCeEE-EEECCCeEEEEECCCCeE-EEEEe---------CCCCcEEEEEEcCCEE-EEEeCCCeEEEE
Q psy7057         118 HTDCVRGLAVLNDTDFV-SCSNDASIRVWDSTTGKC-VHTMY---------GHPNFIYSVAAHGDLI-TSGGEDQCVCVY  185 (557)
Q Consensus       118 h~~~V~~l~~~~~~~lv-s~s~Dg~I~vwd~~~~~~-~~~~~---------~h~~~V~~l~~~~~~l-~s~s~Dg~I~iw  185 (557)
                      .......++..+++.++ +-+.++.|..+|..+++. +....         ..-.....|+.+++.| ++-+..+.|..|
T Consensus       115 ~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~~lyv~d~~~~~I~~~  194 (306)
T 2p4o_A          115 DAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNTEKMLLLRI  194 (306)
T ss_dssp             TCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEETTTTEEEEE
T ss_pred             CccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCCCEEEEEeCCCCEEEEE
Confidence            22334556656666644 444688999999765532 21111         1112345566677655 455567899999


Q ss_pred             ECCC-C-----ceEeeCCccEEEEEEcCCCcEEEE-EcCCcEEEEecC
Q psy7057         186 QNKA-Q-----NSFMIPAMSVWAVAILPNSDIVTG-SSDGIVRVFSAN  226 (557)
Q Consensus       186 d~~~-~-----~~~~~~~~~v~~v~~~p~g~l~sg-~~Dg~I~iwd~~  226 (557)
                      +... .     ..+.. ......+++.++|.+.++ ...+.|.+++..
T Consensus       195 ~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~  241 (306)
T 2p4o_A          195 PVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD  241 (306)
T ss_dssp             EBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCEEEECBTTCCEEEECTT
T ss_pred             EeCCCCCCCccEEEec-cCCCCCeEECCCCCEEEEeCCCCeEEEECCC
Confidence            9653 1     11211 124567889999985544 456789999865

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=97.12  E-value=0.068  Score=54.48  Aligned_cols=175  Identities=11%  Similarity=0.021  Sum_probs=107.3

Q ss_pred             ccEEEEEEcCC-CcEE-EEECCCcEEEEcCCC----------------CCCCCCCCEE-EEEECCCeEEEEECCCCeEEE
Q psy7057          13 MDVRSLSVTPD-GCIL-SASRDKSAKLWKPND----------------LSPGAKVNTL-LSASWDMTAKLWCLESQQCKL   73 (557)
Q Consensus        13 ~~V~~l~~spd-g~l~-sgs~Dg~V~iWd~~~----------------~~~~~~~~~l-~sgs~Dg~i~iwd~~~~~~~~   73 (557)
                      .....++|.+. +.|+ +-...+.|..+++..                +++++.+..| ++-...+.|.+.++.......
T Consensus       116 ~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~  195 (386)
T 3v65_B          116 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKV  195 (386)
T ss_dssp             SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEE
T ss_pred             CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEE
Confidence            34678899875 4454 545677888887764                2333333333 344445677777766543333


Q ss_pred             EEcccCCcEEEEEEcCCC-EE-EEEECC-CeEEEEeCCCcEEEEEe-CCCCCEEEEEEeCC-CeEE-EEECCCeEEEEEC
Q psy7057          74 TIRQHEMAVWGVIQLANG-II-VTGCAD-KTIKLHSEEGEFLKTLT-GHTDCVRGLAVLND-TDFV-SCSNDASIRVWDS  147 (557)
Q Consensus        74 ~l~~h~~~V~~l~~~~~~-~l-~sgs~d-g~I~vwd~~~~~~~~l~-~h~~~V~~l~~~~~-~~lv-s~s~Dg~I~vwd~  147 (557)
                      .+...-.....+++.|.+ .| ++-... +.|...+..+.....+. ..-.....|+++++ +.|. +-+..+.|..+|+
T Consensus       196 l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~  275 (386)
T 3v65_B          196 LLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANL  275 (386)
T ss_dssp             EECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECT
T ss_pred             eecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeC
Confidence            344344667899999854 44 444344 67888887776555543 23445789999965 5544 5566788999997


Q ss_pred             CCCeEEEEEeCCCCcEEEEEEcCC-EEEEEeCCCeEEEEEC
Q psy7057         148 TTGKCVHTMYGHPNFIYSVAAHGD-LITSGGEDQCVCVYQN  187 (557)
Q Consensus       148 ~~~~~~~~~~~h~~~V~~l~~~~~-~l~s~s~Dg~I~iwd~  187 (557)
                      ........+.........|++++. ++++-...+.|..++.
T Consensus       276 dG~~~~~~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~  316 (386)
T 3v65_B          276 DGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANK  316 (386)
T ss_dssp             TSCSCEEEECSSCSSEEEEEEETTEEEEEETTTTEEEEEET
T ss_pred             CCCeeEEEEECCCCCceEEEEECCEEEEeeCCCCeEEEEEC
Confidence            644333333333445667777444 5556667778888873

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=97.06  E-value=0.05  Score=56.39  Aligned_cols=212  Identities=9%  Similarity=0.045  Sum_probs=119.9

Q ss_pred             cEEEEEEcCC--CcEEEEECCCcEEEEcCCC---------------CCCCCCCCEEEEEECC-C----eEEEEECCCC-e
Q psy7057          14 DVRSLSVTPD--GCILSASRDKSAKLWKPND---------------LSPGAKVNTLLSASWD-M----TAKLWCLESQ-Q   70 (557)
Q Consensus        14 ~V~~l~~spd--g~l~sgs~Dg~V~iWd~~~---------------~~~~~~~~~l~sgs~D-g----~i~iwd~~~~-~   70 (557)
                      ....|+++|+  +.|+.+...+.|+.+|+..               +++++++++|+.+... +    .+...+.... .
T Consensus       138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~  217 (430)
T 3tc9_A          138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFK  217 (430)
T ss_dssp             CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSC
T ss_pred             CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCcee
Confidence            3468899973  5577666668888888765               5566777766665542 1    2333332221 1


Q ss_pred             EEEEEcccCCcEEEEEEcC-CC-EEEEEECCCeEEEEeCCCcEEEEEe--CCCCCEEEEEEeCCCe-EE-EEECCCeEEE
Q psy7057          71 CKLTIRQHEMAVWGVIQLA-NG-IIVTGCADKTIKLHSEEGEFLKTLT--GHTDCVRGLAVLNDTD-FV-SCSNDASIRV  144 (557)
Q Consensus        71 ~~~~l~~h~~~V~~l~~~~-~~-~l~sgs~dg~I~vwd~~~~~~~~l~--~h~~~V~~l~~~~~~~-lv-s~s~Dg~I~v  144 (557)
                      ....+.. ......+++.| ++ ++++-..++.|..++..+.....+.  +.....+.|+++|++. ++ +-...+.|..
T Consensus       218 ~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~  296 (430)
T 3tc9_A          218 VITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILR  296 (430)
T ss_dssp             SEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEE
T ss_pred             eeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEE
Confidence            0122221 23345778899 66 4555556788999997665542222  1224578999999987 44 5556788999


Q ss_pred             EECCC--CeE--EEEEeCC---C------------CcEE-EEEEc----------CCEEEEEeCCCeEEEEECCCC-ceE
Q psy7057         145 WDSTT--GKC--VHTMYGH---P------------NFIY-SVAAH----------GDLITSGGEDQCVCVYQNKAQ-NSF  193 (557)
Q Consensus       145 wd~~~--~~~--~~~~~~h---~------------~~V~-~l~~~----------~~~l~s~s~Dg~I~iwd~~~~-~~~  193 (557)
                      ++...  ++.  +..+.+.   .            .... .++.+          +.++++-...+.|+.++.... ..+
T Consensus       297 ~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~~G~v~~~  376 (430)
T 3tc9_A          297 SDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTPQGRVTTF  376 (430)
T ss_dssp             EEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEECTTSEEEEE
T ss_pred             EeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEECCCCcEEEE
Confidence            87542  222  2222221   0            0122 34332          334445455678888873322 222


Q ss_pred             eeC---------C---------ccEEEEEEcC-CCcEEEE-EcCCcEEEEecC
Q psy7057         194 MIP---------A---------MSVWAVAILP-NSDIVTG-SSDGIVRVFSAN  226 (557)
Q Consensus       194 ~~~---------~---------~~v~~v~~~p-~g~l~sg-~~Dg~I~iwd~~  226 (557)
                      .+.         .         ...+.+++.| ++.|+.+ ...+.||.++.+
T Consensus       377 ~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e  429 (430)
T 3tc9_A          377 AGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE  429 (430)
T ss_dssp             EECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred             EeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence            221         1         1478999999 4665444 456778887754

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=97.03  E-value=0.028  Score=62.76  Aligned_cols=174  Identities=11%  Similarity=0.110  Sum_probs=102.3

Q ss_pred             cEEEEEEc-CCCc-EE-EEECCC----cEEEEcCCC---------------CCCCCCCCEEEEEECC-----CeEEEEEC
Q psy7057          14 DVRSLSVT-PDGC-IL-SASRDK----SAKLWKPND---------------LSPGAKVNTLLSASWD-----MTAKLWCL   66 (557)
Q Consensus        14 ~V~~l~~s-pdg~-l~-sgs~Dg----~V~iWd~~~---------------~~~~~~~~~l~sgs~D-----g~i~iwd~   66 (557)
                      .+...+|| |||+ |+ +.+.+|    +|+++|+.+               +.|+++++.|+....+     ..|.++++
T Consensus       175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~l  254 (751)
T 2xe4_A          175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVM  254 (751)
T ss_dssp             EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEEECSCCEECSSTTEEEEEEECTTCCEEEEEEEET
T ss_pred             EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccCceeeEEEecCCCEEEEEEECCCCCCCEEEEEEC
Confidence            67889999 9998 55 444443    488888653               4567788888777765     35788888


Q ss_pred             CCCe--EEEEEc-ccCCcEEEEEEcCCC-EEEEEE-C--CCeEEEEeCCCc--EE--EEEe-CCCCCEEEEEEeCCCeEE
Q psy7057          67 ESQQ--CKLTIR-QHEMAVWGVIQLANG-IIVTGC-A--DKTIKLHSEEGE--FL--KTLT-GHTDCVRGLAVLNDTDFV  134 (557)
Q Consensus        67 ~~~~--~~~~l~-~h~~~V~~l~~~~~~-~l~sgs-~--dg~I~vwd~~~~--~~--~~l~-~h~~~V~~l~~~~~~~lv  134 (557)
                      .++.  ....+. .+......+.|+|++ .|+..+ .  ...|.++|..+.  ..  ..+. .......++.|+..+.|+
T Consensus       255 gt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~  334 (751)
T 2xe4_A          255 GKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHLV  334 (751)
T ss_dssp             TSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTEEE
T ss_pred             CCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCEEE
Confidence            7763  122332 233456788999999 444433 2  334777775432  22  3333 344566777766666665


Q ss_pred             EEE-CC----CeEEEEECCCCeEEEE-EeCCCC--cEEEEEEcCC-EEEEEeCCCeE--EEEEC
Q psy7057         135 SCS-ND----ASIRVWDSTTGKCVHT-MYGHPN--FIYSVAAHGD-LITSGGEDQCV--CVYQN  187 (557)
Q Consensus       135 s~s-~D----g~I~vwd~~~~~~~~~-~~~h~~--~V~~l~~~~~-~l~s~s~Dg~I--~iwd~  187 (557)
                      ..+ .+    ..|..+++.++..... +..|..  .+..+.+.++ ++++...++..  .++++
T Consensus       335 ~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~dl  398 (751)
T 2xe4_A          335 ILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRAGLTRIWTMMA  398 (751)
T ss_dssp             EEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEEETTEEEEEEEEC
T ss_pred             EEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEECCEEEEEEEeCCEEEEEEEec
Confidence            433 33    3577777764222222 233333  4566777555 45566777754  44554

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=97.02  E-value=0.26  Score=49.25  Aligned_cols=212  Identities=8%  Similarity=0.011  Sum_probs=121.7

Q ss_pred             cEEEEEEcCCCcEEEEECCCcEEEEcCCC---------------CCCCCCCCEEEEEE-CCCeEEEEECCCCeEEEEEcc
Q psy7057          14 DVRSLSVTPDGCILSASRDKSAKLWKPND---------------LSPGAKVNTLLSAS-WDMTAKLWCLESQQCKLTIRQ   77 (557)
Q Consensus        14 ~V~~l~~spdg~l~sgs~Dg~V~iWd~~~---------------~~~~~~~~~l~sgs-~Dg~i~iwd~~~~~~~~~l~~   77 (557)
                      ..+|.+..++..|+ -+....|+..++..               +.+++..+.|+... ..+.|..+++........+..
T Consensus        35 ~~~C~~~~~~~~ll-~~~~~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~  113 (349)
T 3v64_C           35 RRSCKALGPEPVLL-FANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVST  113 (349)
T ss_dssp             SSCEEESSSCCEEE-EECBSCEEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS
T ss_pred             CCcccccccCceeE-eecccceEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeC
Confidence            34455555533333 33445566666654               34444444444443 456777777766543333333


Q ss_pred             cCCcEEEEEEcC-CC-EEEEEECCCeEEEEeCCCcEEEEEe-CCCCCEEEEEEeCC-CeEE-EEECC-CeEEEEECCCCe
Q psy7057          78 HEMAVWGVIQLA-NG-IIVTGCADKTIKLHSEEGEFLKTLT-GHTDCVRGLAVLND-TDFV-SCSND-ASIRVWDSTTGK  151 (557)
Q Consensus        78 h~~~V~~l~~~~-~~-~l~sgs~dg~I~vwd~~~~~~~~l~-~h~~~V~~l~~~~~-~~lv-s~s~D-g~I~vwd~~~~~  151 (557)
                      .......+++.+ .+ ++++-...+.|.+.+.++.....+. ..-.....+++.|. +.+. +-... +.|...++... 
T Consensus       114 ~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~-  192 (349)
T 3v64_C          114 GLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS-  192 (349)
T ss_dssp             SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-
T ss_pred             CCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCC-
Confidence            334456788876 44 5566666788999997776544443 33456899999985 5544 54444 78888887543 


Q ss_pred             EEEEE-eCCCCcEEEEEEc--CCE-EEEEeCCCeEEEEECCCC--ceEe-eCCccEEEEEEcCCCc-EEEEEcCCcEEEE
Q psy7057         152 CVHTM-YGHPNFIYSVAAH--GDL-ITSGGEDQCVCVYQNKAQ--NSFM-IPAMSVWAVAILPNSD-IVTGSSDGIVRVF  223 (557)
Q Consensus       152 ~~~~~-~~h~~~V~~l~~~--~~~-l~s~s~Dg~I~iwd~~~~--~~~~-~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iw  223 (557)
                      ....+ ...-.....|+++  +.. +++-+..+.|..++....  ..+. ........+++. .+. +++-...+.|..+
T Consensus       193 ~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~~~~~V~~~  271 (349)
T 3v64_C          193 GRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDWHTKSINSA  271 (349)
T ss_dssp             SCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEE-TTEEEEEETTTTEEEEE
T ss_pred             CcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEEE-CCEEEEecCCCCeEEEE
Confidence            22232 2223456778884  444 445556678999986543  2222 223355677773 444 4455556777777


Q ss_pred             ecCCC
Q psy7057         224 SANPD  228 (557)
Q Consensus       224 d~~~~  228 (557)
                      +..++
T Consensus       272 ~~~~G  276 (349)
T 3v64_C          272 NKFTG  276 (349)
T ss_dssp             ETTTC
T ss_pred             EccCC
Confidence            74333

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=97.00  E-value=0.39  Score=49.01  Aligned_cols=177  Identities=10%  Similarity=-0.013  Sum_probs=110.7

Q ss_pred             EEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCC-C-EEEEEECCCeEEEEeCCCc-----EEEEEeCCCCCEE
Q psy7057          51 TLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLAN-G-IIVTGCADKTIKLHSEEGE-----FLKTLTGHTDCVR  123 (557)
Q Consensus        51 ~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~-~-~l~sgs~dg~I~vwd~~~~-----~~~~l~~h~~~V~  123 (557)
                      +|+.+. ...|+..++........+. ....+..++|.+. + ++++-...+.|+.++..+.     ....+........
T Consensus        85 ~ll~~~-~~~I~~i~l~~~~~~~~~~-~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~  162 (400)
T 3p5b_L           85 YLFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD  162 (400)
T ss_dssp             EEEEEE-TTEEEEECTTSCSCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEE
T ss_pred             eeEEec-cceeEEEccCCcceeEecc-ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcc
Confidence            444444 4688888987765444443 4567789999974 4 4555556788888886552     2233333445688


Q ss_pred             EEEEeC-CCeEE-EEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEEc--CCEEEEEe-C-CCeEEEEECCCC--ceEe-
Q psy7057         124 GLAVLN-DTDFV-SCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAH--GDLITSGG-E-DQCVCVYQNKAQ--NSFM-  194 (557)
Q Consensus       124 ~l~~~~-~~~lv-s~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~~--~~~l~s~s-~-Dg~I~iwd~~~~--~~~~-  194 (557)
                      .|++.+ .+.|+ +-...+.|.+.++........+...-.....|+++  +..|+... . .+.|...++...  ..+. 
T Consensus       163 glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~  242 (400)
T 3p5b_L          163 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT  242 (400)
T ss_dssp             EEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEEC
T ss_pred             cEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEE
Confidence            899987 45544 66677899999987554444444344557788884  34444443 2 367888886543  2222 


Q ss_pred             eCCccEEEEEEcCCCc-EE-EEEcCCcEEEEecCCCC
Q psy7057         195 IPAMSVWAVAILPNSD-IV-TGSSDGIVRVFSANPDR  229 (557)
Q Consensus       195 ~~~~~v~~v~~~p~g~-l~-sg~~Dg~I~iwd~~~~~  229 (557)
                      ..-.....|++.+++. |. +=...+.|+.++++...
T Consensus       243 ~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~  279 (400)
T 3p5b_L          243 ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN  279 (400)
T ss_dssp             SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCC
T ss_pred             CCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCc
Confidence            2224678999998765 54 44456789999987543

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=96.98  E-value=0.02  Score=61.16  Aligned_cols=177  Identities=8%  Similarity=-0.013  Sum_probs=111.0

Q ss_pred             CCEEEEEEC-CCeEEEEECCCCeEEEEEcc-cCCcEEEEEE-c-CCC-EEEEEE------------------CCCeEEEE
Q psy7057          49 VNTLLSASW-DMTAKLWCLESQQCKLTIRQ-HEMAVWGVIQ-L-ANG-IIVTGC------------------ADKTIKLH  105 (557)
Q Consensus        49 ~~~l~sgs~-Dg~i~iwd~~~~~~~~~l~~-h~~~V~~l~~-~-~~~-~l~sgs------------------~dg~I~vw  105 (557)
                      ++++..... +.+|.+.|+.+.++...+.- ....+..+++ . |++ ++++++                  .++.+.+.
T Consensus       101 G~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvI  180 (595)
T 1fwx_A          101 GRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAV  180 (595)
T ss_dssp             EEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEE
T ss_pred             CCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEE
Confidence            455555544 56799999999998875532 2345778887 4 776 666664                  24578888


Q ss_pred             eC-CCcEEEEEeCCCCCEEEEEEeCCCeEE-EEECCC--------------------------------------eEEEE
Q psy7057         106 SE-EGEFLKTLTGHTDCVRGLAVLNDTDFV-SCSNDA--------------------------------------SIRVW  145 (557)
Q Consensus       106 d~-~~~~~~~l~~h~~~V~~l~~~~~~~lv-s~s~Dg--------------------------------------~I~vw  145 (557)
                      |. +.+.+.++.--. ....++++|+++++ +++.+.                                      .|.+.
T Consensus       181 D~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VI  259 (595)
T 1fwx_A          181 DADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVV  259 (595)
T ss_dssp             ETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEE
T ss_pred             ECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEE
Confidence            84 445555554212 34567788887743 444332                                      36666


Q ss_pred             ECCC--CeE-EEEEeCCCCcEEEEEE--cCCEEEEE-eCCCeEEEEECCCCc------------eE--eeCCccEEEEEE
Q psy7057         146 DSTT--GKC-VHTMYGHPNFIYSVAA--HGDLITSG-GEDQCVCVYQNKAQN------------SF--MIPAMSVWAVAI  205 (557)
Q Consensus       146 d~~~--~~~-~~~~~~h~~~V~~l~~--~~~~l~s~-s~Dg~I~iwd~~~~~------------~~--~~~~~~v~~v~~  205 (557)
                      |.++  ++. +..+.. .....++.+  +|++++++ ..+.+|.++|..+..            ..  .......+.++|
T Consensus       260 D~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF  338 (595)
T 1fwx_A          260 DGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAF  338 (595)
T ss_dssp             ECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEE
T ss_pred             eCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEE
Confidence            7665  433 334431 112234444  78876555 477899999977442            11  122346899999


Q ss_pred             cCCCc-EEEEEcCCcEEEEecCC
Q psy7057         206 LPNSD-IVTGSSDGIVRVFSANP  227 (557)
Q Consensus       206 ~p~g~-l~sg~~Dg~I~iwd~~~  227 (557)
                      +|+|. +++.--|+.|.+|++..
T Consensus       339 ~~dG~aY~t~~ldsqV~kwdi~~  361 (595)
T 1fwx_A          339 DGRGNAYTSLFLDSQVVKWNIED  361 (595)
T ss_dssp             CTTSEEEEEETTTTEEEEEEHHH
T ss_pred             CCCCeEEEEEecCCcEEEEEhhH
Confidence            99997 45666799999999865

>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}

Probab=96.96  E-value=0.056  Score=53.65  Aligned_cols=173  Identities=10%  Similarity=0.028  Sum_probs=99.6

Q ss_pred             CcccEEEEEEcCCCcEEEEECCCcE-EEEcCCC---------------CCCCCCCCEEEEEECCCeEEEEEC--CCCeEE
Q psy7057          11 HSMDVRSLSVTPDGCILSASRDKSA-KLWKPND---------------LSPGAKVNTLLSASWDMTAKLWCL--ESQQCK   72 (557)
Q Consensus        11 H~~~V~~l~~spdg~l~sgs~Dg~V-~iWd~~~---------------~~~~~~~~~l~sgs~Dg~i~iwd~--~~~~~~   72 (557)
                      +.+.+.+|.+.+++.++.++.++.| +-+|--.               +.+.+.+..++.+...+..+-+|-  .+.+.+
T Consensus       120 ~~~~~~~i~~~~~~~~~~~~~~g~v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~  199 (327)
T 2xbg_A          120 LPGSPRLIKALGNGSAEMITNVGAIYRTKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPH  199 (327)
T ss_dssp             CSSCEEEEEEEETTEEEEEETTCCEEEESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEE
T ss_pred             CCCCeEEEEEECCCCEEEEeCCccEEEEcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeEC
Confidence            3456788888777775555556654 3333111               223344555544433333333342  233333


Q ss_pred             EEEcccCCcEEEEEEcCCCEEEEEECCCeEEEEeCC-CcEEEEEe-C---CCCCEEEEEEeCCCeEEEEECCCeEEEEEC
Q psy7057          73 LTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEE-GEFLKTLT-G---HTDCVRGLAVLNDTDFVSCSNDASIRVWDS  147 (557)
Q Consensus        73 ~~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~~-~~~~~~l~-~---h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~  147 (557)
                      .  ......+..+++.+++.++.++.+|.+++.+.+ +..-..+. .   +...+.++.+.+++.++.++.++.|. +..
T Consensus       200 ~--~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g~i~-~S~  276 (327)
T 2xbg_A          200 N--RTTSRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAGALL-CSQ  276 (327)
T ss_dssp             E--CCSSSCEEEEEECTTSCEEEEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEESTTCEE-EES
T ss_pred             C--CCCCCccceeEECCCCCEEEEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeCCCeEE-EeC
Confidence            2  234567888999888866777788888877423 32222221 1   23458889888877777777778773 333


Q ss_pred             CCCeEEEEEe---CCCCcEEEEEE-cCCEEEEEeCCCeEEEEE
Q psy7057         148 TTGKCVHTMY---GHPNFIYSVAA-HGDLITSGGEDQCVCVYQ  186 (557)
Q Consensus       148 ~~~~~~~~~~---~h~~~V~~l~~-~~~~l~s~s~Dg~I~iwd  186 (557)
                      ..++.-..+.   .+...++++.+ ++..+++++.+|.|.-++
T Consensus       277 DgG~tW~~~~~~~~~~~~~~~v~~~~~~~~~~~G~~G~i~~~~  319 (327)
T 2xbg_A          277 DGGQTWQQDVDVKKVPSNFYKILFFSPDQGFILGQKGILLRYV  319 (327)
T ss_dssp             STTSSCEECGGGTTSSSCCCEEEEEETTEEEEECSTTEEEEEC
T ss_pred             CCCcccEEcCccCCCCCCeEEEEEECCCceEEEcCCceEEEEc
Confidence            4443322232   23456677777 566677888888777665

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=96.94  E-value=0.1  Score=56.31  Aligned_cols=135  Identities=13%  Similarity=0.006  Sum_probs=85.6

Q ss_pred             CCcEEEEECCCcEEEEcCCC--------CC---------CCC--CCC------EEEEEE------CCCeEEEEECCCCeE
Q psy7057          23 DGCILSASRDKSAKLWKPND--------LS---------PGA--KVN------TLLSAS------WDMTAKLWCLESQQC   71 (557)
Q Consensus        23 dg~l~sgs~Dg~V~iWd~~~--------~~---------~~~--~~~------~l~sgs------~Dg~i~iwd~~~~~~   71 (557)
                      +++++.++.|+.|.-+|..+        +.         ..|  .+.      .+++++      .++.|..+|..+|+.
T Consensus       117 ~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~  196 (582)
T 1flg_A          117 GDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEE  196 (582)
T ss_dssp             TTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCE
T ss_pred             CCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCE
Confidence            45677888889888888765        10         011  123      566655      378999999999998


Q ss_pred             EEEEcccCCcE-----------------------------------------EEEEEcCC-CEEEEEEC-----------
Q psy7057          72 KLTIRQHEMAV-----------------------------------------WGVIQLAN-GIIVTGCA-----------   98 (557)
Q Consensus        72 ~~~l~~h~~~V-----------------------------------------~~l~~~~~-~~l~sgs~-----------   98 (557)
                      +.+.......+                                         ..+++.|. +++..++.           
T Consensus       197 ~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~  276 (582)
T 1flg_A          197 IWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWART  276 (582)
T ss_dssp             EEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGS
T ss_pred             EeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccc
Confidence            87654321110                                         12344554 46666553           


Q ss_pred             ---------C----CeEEEEe-CCCcEEEEEeC--CC--------CCEEEEEEe-CCC----eEEEEECCCeEEEEECCC
Q psy7057          99 ---------D----KTIKLHS-EEGEFLKTLTG--HT--------DCVRGLAVL-NDT----DFVSCSNDASIRVWDSTT  149 (557)
Q Consensus        99 ---------d----g~I~vwd-~~~~~~~~l~~--h~--------~~V~~l~~~-~~~----~lvs~s~Dg~I~vwd~~~  149 (557)
                               |    +.|..+| .+|+.+..++.  |.        .++. +... .++    .++.++.+|.++++|..+
T Consensus       277 ~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~t  355 (582)
T 1flg_A          277 AKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSN  355 (582)
T ss_dssp             CTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTT
T ss_pred             cCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCC
Confidence                     2    5788999 58888877653  32        1222 1221 345    366889999999999999


Q ss_pred             CeEEEEEeC
Q psy7057         150 GKCVHTMYG  158 (557)
Q Consensus       150 ~~~~~~~~~  158 (557)
                      |+.+..+..
T Consensus       356 G~~lw~~~~  364 (582)
T 1flg_A          356 GKLQNAFPF  364 (582)
T ss_dssp             CCEEEEEES
T ss_pred             CCEeccccc
Confidence            998877653

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=96.93  E-value=0.41  Score=48.81  Aligned_cols=177  Identities=13%  Similarity=0.009  Sum_probs=108.2

Q ss_pred             cccEEEEEEcCCC-cEE-EEECCCcEEEEcCCC--------------------CCCCCCCCEE-EEEECCCeEEEEECCC
Q psy7057          12 SMDVRSLSVTPDG-CIL-SASRDKSAKLWKPND--------------------LSPGAKVNTL-LSASWDMTAKLWCLES   68 (557)
Q Consensus        12 ~~~V~~l~~spdg-~l~-sgs~Dg~V~iWd~~~--------------------~~~~~~~~~l-~sgs~Dg~i~iwd~~~   68 (557)
                      ...+..|+|++.+ .|+ +-...+.|+.+++..                    ++.+..+..| ++-...+.|.+.+++.
T Consensus       111 ~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g  190 (400)
T 3p5b_L          111 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG  190 (400)
T ss_dssp             CSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTT
T ss_pred             cCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCC
Confidence            4567889999854 454 444567787777653                    2333323333 3444567777887765


Q ss_pred             CeEEEEEcccCCcEEEEEEcCC-CEEEEEEC--CCeEEEEeCCCcEEEEEe-CCCCCEEEEEEeCC-CeEE-EEECCCeE
Q psy7057          69 QQCKLTIRQHEMAVWGVIQLAN-GIIVTGCA--DKTIKLHSEEGEFLKTLT-GHTDCVRGLAVLND-TDFV-SCSNDASI  142 (557)
Q Consensus        69 ~~~~~~l~~h~~~V~~l~~~~~-~~l~sgs~--dg~I~vwd~~~~~~~~l~-~h~~~V~~l~~~~~-~~lv-s~s~Dg~I  142 (557)
                      ......+...-.....|++.|. +.|....+  .+.|...+.+|.....+. ..-.....|+++++ +.|. +-+....|
T Consensus       191 ~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I  270 (400)
T 3p5b_L          191 VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSI  270 (400)
T ss_dssp             CSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred             CceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEE
Confidence            5444444434456789999984 55554443  367888888876655543 23357899999976 5554 55566889


Q ss_pred             EEEECCCCeEEEEEeC--CCCcEEEEEEcCC-EEEEEeCCCeEEEEECC
Q psy7057         143 RVWDSTTGKCVHTMYG--HPNFIYSVAAHGD-LITSGGEDQCVCVYQNK  188 (557)
Q Consensus       143 ~vwd~~~~~~~~~~~~--h~~~V~~l~~~~~-~l~s~s~Dg~I~iwd~~  188 (557)
                      ...|+...........  .-.....|++.++ ++++-...+.|..++..
T Consensus       271 ~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~~~lywtd~~~~~V~~~~~~  319 (400)
T 3p5b_L          271 SSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRL  319 (400)
T ss_dssp             EEEETTSCCCEEEEECSSTTSSEEEEEEETTEEEEEESSSCSEEEEESS
T ss_pred             EEEeCCCCccEEEEeCCCCCCCCEEEEEeCCEEEEecCCCCeEEEEEcC
Confidence            9999864433222222  2344567777554 55566667788888843

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=96.84  E-value=0.17  Score=52.29  Aligned_cols=143  Identities=12%  Similarity=0.082  Sum_probs=87.5

Q ss_pred             CCCCC-CCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEEC-CC----eEEEEeCCCcEE--E
Q psy7057          43 LSPGA-KVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCA-DK----TIKLHSEEGEFL--K  113 (557)
Q Consensus        43 ~~~~~-~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~-dg----~I~vwd~~~~~~--~  113 (557)
                      +++++ +...|..+...+.|+.+|+.++.... +.........+++.+++ .|+.+.. ++    .+.+.+..+...  .
T Consensus       142 lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~-~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~  220 (430)
T 3tc9_A          142 LSFDPKNHNHLYLVGEQHPTRLIDFEKEYVST-VYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVIT  220 (430)
T ss_dssp             EEEETTEEEEEEEEEBTEEEEEEETTTTEEEE-EECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSEE
T ss_pred             EEECCCCCCeEEEEeCCCcEEEEECCCCEEEE-EecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeeee
Confidence            55665 34556666555888999988765443 33355678899999988 4555554 22    344444333221  2


Q ss_pred             EEeCCCCCEEEEEEeC-CCeEE-EEECCCeEEEEECCCCeEEEEEeC-CCCcEEEEEE--cCC-EEEEEeCCCeEEEEEC
Q psy7057         114 TLTGHTDCVRGLAVLN-DTDFV-SCSNDASIRVWDSTTGKCVHTMYG-HPNFIYSVAA--HGD-LITSGGEDQCVCVYQN  187 (557)
Q Consensus       114 ~l~~h~~~V~~l~~~~-~~~lv-s~s~Dg~I~vwd~~~~~~~~~~~~-h~~~V~~l~~--~~~-~l~s~s~Dg~I~iwd~  187 (557)
                      .+.. ......++++| ++.|+ +-..++.|..++..++........ .....+.|++  +++ ++++-...+.|..++.
T Consensus       221 ~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~  299 (430)
T 3tc9_A          221 ELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDY  299 (430)
T ss_dssp             EEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred             eecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeC
Confidence            2221 23456788999 67755 444678899999876654222221 2234667888  667 4555567788999874

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=96.75  E-value=0.49  Score=46.44  Aligned_cols=179  Identities=11%  Similarity=-0.002  Sum_probs=104.7

Q ss_pred             CCEEEE-EECCCeEEEEECCC----CeEEEEEcccCCcEEEEEEcC-CC-EEEEEECCCeEEEEeCCCcEEEEEe-CCCC
Q psy7057          49 VNTLLS-ASWDMTAKLWCLES----QQCKLTIRQHEMAVWGVIQLA-NG-IIVTGCADKTIKLHSEEGEFLKTLT-GHTD  120 (557)
Q Consensus        49 ~~~l~s-gs~Dg~i~iwd~~~----~~~~~~l~~h~~~V~~l~~~~-~~-~l~sgs~dg~I~vwd~~~~~~~~l~-~h~~  120 (557)
                      .+.|+. -...+.|..+++..    ......+...-.....+++.+ .+ ++++-...+.|.+.+..+.....+. ..-.
T Consensus        41 ~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~  120 (316)
T 1ijq_A           41 SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGS  120 (316)
T ss_dssp             TTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTC
T ss_pred             CCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCC
Confidence            344443 34457788888765    122222322224456788875 44 5556567889999998776554443 3345


Q ss_pred             CEEEEEEeCC-CeEEEEEC-C-CeEEEEECCCCeEEEEEe-CCCCcEEEEEEc--CCEE-EEEeCCCeEEEEECCCC--c
Q psy7057         121 CVRGLAVLND-TDFVSCSN-D-ASIRVWDSTTGKCVHTMY-GHPNFIYSVAAH--GDLI-TSGGEDQCVCVYQNKAQ--N  191 (557)
Q Consensus       121 ~V~~l~~~~~-~~lvs~s~-D-g~I~vwd~~~~~~~~~~~-~h~~~V~~l~~~--~~~l-~s~s~Dg~I~iwd~~~~--~  191 (557)
                      ....+++.|. +.++.+.. . +.|...++. ++....+. ..-.....|+++  +..| ++-+..+.|..++....  +
T Consensus       121 ~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d-G~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~  199 (316)
T 1ijq_A          121 KPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN-GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRK  199 (316)
T ss_dssp             CEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred             CcceEEeCCCCCEEEEEccCCCCeEEEEcCC-CCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceE
Confidence            7899999985 55554443 3 688888875 44333332 233456788884  4454 45556679999997543  3


Q ss_pred             eEeeC---CccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCC
Q psy7057         192 SFMIP---AMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDR  229 (557)
Q Consensus       192 ~~~~~---~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~  229 (557)
                      .+...   ......+++.. +. +++-...+.|..++..+++
T Consensus       200 ~~~~~~~~~~~P~giav~~-~~ly~~d~~~~~V~~~~~~~g~  240 (316)
T 1ijq_A          200 TILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFSANRLTGS  240 (316)
T ss_dssp             EEEECTTTTSSEEEEEEET-TEEEEEETTTTEEEEEETTTCC
T ss_pred             EEeecCCccCCcEEEEEEC-CEEEEEECCCCeEEEEeCCCCc
Confidence            33221   23456777753 44 5555567788888765443

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=96.72  E-value=0.26  Score=48.70  Aligned_cols=177  Identities=12%  Similarity=0.019  Sum_probs=107.8

Q ss_pred             cEEEEEEcCC-CcEE-EEECCCcEEEEcCCC-----------------CCCCCCCCEE-EEEECCCeEEEEECCCCeEEE
Q psy7057          14 DVRSLSVTPD-GCIL-SASRDKSAKLWKPND-----------------LSPGAKVNTL-LSASWDMTAKLWCLESQQCKL   73 (557)
Q Consensus        14 ~V~~l~~spd-g~l~-sgs~Dg~V~iWd~~~-----------------~~~~~~~~~l-~sgs~Dg~i~iwd~~~~~~~~   73 (557)
                      ...+|+|.+. +.|+ +-...+.|..+++..                 +++++.+..| ++-...+.|.++++.......
T Consensus        36 ~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~  115 (318)
T 3sov_A           36 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKV  115 (318)
T ss_dssp             EEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred             ccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEE
Confidence            4567888874 4544 555667788887654                 2233223333 333445678888876543333


Q ss_pred             EEcccCCcEEEEEEcCC-CEEEEEEC--CCeEEEEeCCCcEEEEEe-CCCCCEEEEEEeCC-CeEE-EEECCCeEEEEEC
Q psy7057          74 TIRQHEMAVWGVIQLAN-GIIVTGCA--DKTIKLHSEEGEFLKTLT-GHTDCVRGLAVLND-TDFV-SCSNDASIRVWDS  147 (557)
Q Consensus        74 ~l~~h~~~V~~l~~~~~-~~l~sgs~--dg~I~vwd~~~~~~~~l~-~h~~~V~~l~~~~~-~~lv-s~s~Dg~I~vwd~  147 (557)
                      .+.........+++.|. +.|.....  .+.|...+.+|.....+. ..-.....|+++++ +.|. +-+..+.|..+|+
T Consensus       116 l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~  195 (318)
T 3sov_A          116 LFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNL  195 (318)
T ss_dssp             EECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred             EEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcC
Confidence            33344556789999985 55555553  577888887776554443 23346789999985 5544 5566788999998


Q ss_pred             CCCeEEEEEeCCCCcEEEEEEcCC-EEEEEeCCCeEEEEECCCC
Q psy7057         148 TTGKCVHTMYGHPNFIYSVAAHGD-LITSGGEDQCVCVYQNKAQ  190 (557)
Q Consensus       148 ~~~~~~~~~~~h~~~V~~l~~~~~-~l~s~s~Dg~I~iwd~~~~  190 (557)
                      ..........+.......++++++ .+++-...+.|..++..+.
T Consensus       196 dG~~~~~~~~~~~~~P~glav~~~~lywtd~~~~~V~~~~~~~G  239 (318)
T 3sov_A          196 DGTNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILACNKYTG  239 (318)
T ss_dssp             TSCSCEEEECSCCSCEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred             CCCceEEEecCCCCCceEEEEeCCEEEEEecCCCeEEEEECCCC
Confidence            643322222333455667777554 4556556788888886433

>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A

Probab=96.68  E-value=1.1  Score=49.62  Aligned_cols=205  Identities=12%  Similarity=0.133  Sum_probs=123.8

Q ss_pred             ccEEEEEEcCCCcEEEEECCCcEEEEcCCCCCCCC--------------CCCEEEEEECCCeEEEEECCCCeEEEEEc--
Q psy7057          13 MDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGA--------------KVNTLLSASWDMTAKLWCLESQQCKLTIR--   76 (557)
Q Consensus        13 ~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~~~~~~--------------~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~--   76 (557)
                      ..|.++....+|.|..|+.+| +..||..+-.+..              ....|..++.+ -+..++..+++.. .+.  
T Consensus        63 ~~i~~i~~d~~g~lWigT~~G-l~~yd~~~~~f~~~~~~~~~~i~~i~~~~g~lWigt~~-Gl~~~~~~~~~~~-~~~~~  139 (758)
T 3ott_A           63 TRIYCGVIIDNTYLYMGTDNG-ILVYNYRADRYEQPETDFPTDVRTMALQGDTLWLGALN-GLYTYQLQSRKLT-SFDTR  139 (758)
T ss_dssp             SCEEEEEEETTTEEEEEETTE-EEEEETTTTEECCCSCCCCSCEEEEEEETTEEEEEETT-EEEEEETTTCCEE-EECHH
T ss_pred             ceEEEEEEcCCCcEEEEeCCC-eEEEeCCCCEEECcccCCCceEEEEEecCCcEEEEcCC-cceeEeCCCCeEE-EeccC
Confidence            569999888888888888766 6788876511100              12334445554 5677787665433 231  


Q ss_pred             ---ccCCcEEEEEEcCCCEEEEEECCCeEEEEeCCCcEEEEEeCC------CCCEEEEEEeCCC-eEEEEECCCeEEEEE
Q psy7057          77 ---QHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKTLTGH------TDCVRGLAVLNDT-DFVSCSNDASIRVWD  146 (557)
Q Consensus        77 ---~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~~~~~~~~l~~h------~~~V~~l~~~~~~-~lvs~s~Dg~I~vwd  146 (557)
                         .....|.++....++.|..|+.+| +..++........+...      ...|.++...+++ .|..|+. +-+..+|
T Consensus       140 ~~~l~~~~i~~i~~d~~g~lWigt~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~  217 (758)
T 3ott_A          140 RNGLPNNTIYSIIRTKDNQIYVGTYNG-LCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYF  217 (758)
T ss_dssp             HHCCSCSCEEEEEECTTCCEEEEETTE-EEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEE
T ss_pred             CCCcCCCeEEEEEEcCCCCEEEEeCCC-HhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEc
Confidence               123568888888888777777654 66777544443333211      1248888887764 4555554 4588899


Q ss_pred             CCCCeEEEEEeCCCCcEEEEEEc-CCEEEEEeCCCeEEEEECCCC--ceEe--------eCCccEEEEEEcCCCcEEEEE
Q psy7057         147 STTGKCVHTMYGHPNFIYSVAAH-GDLITSGGEDQCVCVYQNKAQ--NSFM--------IPAMSVWAVAILPNSDIVTGS  215 (557)
Q Consensus       147 ~~~~~~~~~~~~h~~~V~~l~~~-~~~l~s~s~Dg~I~iwd~~~~--~~~~--------~~~~~v~~v~~~p~g~l~sg~  215 (557)
                      ..+++...........|.++..+ ...|..|+.+ -+.+++..+.  ..+.        .....|+++....+|.|-.|+
T Consensus       218 ~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWiGT  296 (758)
T 3ott_A          218 PSTGQIKQTEAFHNNSIKSLALDGNGDLLAGTDN-GLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHNIWLGT  296 (758)
T ss_dssp             TTTTEEEEEEEEEEEEEEEEEECTTCCEEEEETT-EEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCCEEEEE
T ss_pred             CCCCeEEeccCCCCCeEEEEEEcCCCCEEEEeCC-ceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCCEEEEe
Confidence            77765432211123467888773 3346666654 4777875543  2222        123468999988888888888


Q ss_pred             cCCcEEEEe
Q psy7057         216 SDGIVRVFS  224 (557)
Q Consensus       216 ~Dg~I~iwd  224 (557)
                      ..| +.++.
T Consensus       297 ~~G-l~~~~  304 (758)
T 3ott_A          297 DYG-ISLSR  304 (758)
T ss_dssp             SSS-EEEEC
T ss_pred             CCc-ccccc
Confidence            777 55443

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=96.66  E-value=0.03  Score=59.90  Aligned_cols=158  Identities=11%  Similarity=0.020  Sum_probs=103.1

Q ss_pred             cEEEEEecc-CcccEEEEEE-c-CCCc-EEEEE------------------CCCcEEEEcCCC---------------CC
Q psy7057           2 YKLSTALYG-HSMDVRSLSV-T-PDGC-ILSAS------------------RDKSAKLWKPND---------------LS   44 (557)
Q Consensus         2 ~kl~~~l~g-H~~~V~~l~~-s-pdg~-l~sgs------------------~Dg~V~iWd~~~---------------~~   44 (557)
                      +++.+.+.- .......+++ + |++. ++.++                  .++.+.+.|..+               +.
T Consensus       122 ~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg~pd~~~  201 (595)
T 1fwx_A          122 MKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSGNLDNCD  201 (595)
T ss_dssp             TEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESSCCCCEE
T ss_pred             ceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeCCCccceE
Confidence            455553322 1235778887 4 7877 55553                  245677777776               55


Q ss_pred             CCCCCCEEEEEECCC--------------------------------------eEEEEECCC--CeE-EEEEcccCCcEE
Q psy7057          45 PGAKVNTLLSASWDM--------------------------------------TAKLWCLES--QQC-KLTIRQHEMAVW   83 (557)
Q Consensus        45 ~~~~~~~l~sgs~Dg--------------------------------------~i~iwd~~~--~~~-~~~l~~h~~~V~   83 (557)
                      .++++.++++.+.+.                                      .|.+.|..+  ++. +..+.. .....
T Consensus       202 ~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipv-g~~Ph  280 (595)
T 1fwx_A          202 ADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPI-ANNPH  280 (595)
T ss_dssp             ECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEE-ESSCC
T ss_pred             ECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEec-CCCce
Confidence            667788888887553                                      366777766  433 344432 22445


Q ss_pred             EEEEcCCC--EEEEEECCCeEEEEeCCCc-------------EEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEEEEEC
Q psy7057          84 GVIQLANG--IIVTGCADKTIKLHSEEGE-------------FLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVWDS  147 (557)
Q Consensus        84 ~l~~~~~~--~l~sgs~dg~I~vwd~~~~-------------~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~  147 (557)
                      ++.++|||  .++++..+.+|.++|....             ....+ .-....+.++|+++|. +++.-.|+.|.+||+
T Consensus       281 Gv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v-~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi  359 (595)
T 1fwx_A          281 GCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEP-ELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNI  359 (595)
T ss_dssp             CEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECC-BCCSCEEEEEECTTSEEEEEETTTTEEEEEEH
T ss_pred             EEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEc-CCCCCcceEEECCCCeEEEEEecCCcEEEEEh
Confidence            78999999  5666667899999995422             22333 2345689999999996 347778999999998


Q ss_pred             CC----------CeEEEEEeCCCC
Q psy7057         148 TT----------GKCVHTMYGHPN  161 (557)
Q Consensus       148 ~~----------~~~~~~~~~h~~  161 (557)
                      .+          .+.+.++.-|-.
T Consensus       360 ~~a~~~~~g~~~~~vi~kidV~yq  383 (595)
T 1fwx_A          360 EDAIRAYAGEKVDPIKDKLDVHYQ  383 (595)
T ss_dssp             HHHHHHHHTCSCCCEEEEEECSSC
T ss_pred             hHhhhhhcccccceeEEEeecccc
Confidence            76          556777765543

>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A

Probab=96.64  E-value=0.74  Score=51.09  Aligned_cols=208  Identities=11%  Similarity=0.098  Sum_probs=127.6

Q ss_pred             cccEEEEEEcCCCcEEEEECCCcEEEEcCCCC-----------------CCCCCCCEEEEEECCCeEEEEECCCCeEEEE
Q psy7057          12 SMDVRSLSVTPDGCILSASRDKSAKLWKPNDL-----------------SPGAKVNTLLSASWDMTAKLWCLESQQCKLT   74 (557)
Q Consensus        12 ~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~~-----------------~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~   74 (557)
                      ...|+||.-..+|.|..|..+|.. .||-..+                 ... ....|..|+.+| +..||..+.+....
T Consensus        21 ~n~V~~I~qD~~G~lWigT~~GL~-ryDG~~~~~~~~~~~~~~~~i~~i~~d-~~g~lWigT~~G-l~~yd~~~~~f~~~   97 (758)
T 3ott_A           21 ASVVSCFLQDSEGLIWIGSNKGLF-SYDGYSTQQHFTYGENNNTRIYCGVII-DNTYLYMGTDNG-ILVYNYRADRYEQP   97 (758)
T ss_dssp             CCCEEEEEECTTSCEEEEESSCEE-EECSSCEEECSCTTSTTSSCEEEEEEE-TTTEEEEEETTE-EEEEETTTTEECCC
T ss_pred             cceEEEEEECCCCCEEEEECCCcc-ccCCCceEEEEccCCCCCceEEEEEEc-CCCcEEEEeCCC-eEEEeCCCCEEECc
Confidence            467999999999998888887744 4553220                 111 123566666554 67888877543221


Q ss_pred             EcccCCcEEEEEEcCCCEEEEEECCCeEEEEeCCCcEEEEEe-----CCCCCEEEEEEeCCCeEEEEECCCeEEEEECCC
Q psy7057          75 IRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKTLT-----GHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTT  149 (557)
Q Consensus        75 l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~~~~~~~~l~-----~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~  149 (557)
                      .......|.++.. .++.|..|+.+ -+..++........+.     .....|.++....++.+..++.. -|..++..+
T Consensus        98 ~~~~~~~i~~i~~-~~g~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~-Gl~~~~~~~  174 (758)
T 3ott_A           98 ETDFPTDVRTMAL-QGDTLWLGALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYVGTYN-GLCRYIPSN  174 (758)
T ss_dssp             SCCCCSCEEEEEE-ETTEEEEEETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCCEEEEETT-EEEEEETTT
T ss_pred             ccCCCceEEEEEe-cCCcEEEEcCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCCEEEEeCC-CHhhCccCC
Confidence            1112335777754 46777777776 5777885444444441     12356889888888887777765 477788766


Q ss_pred             CeEEEEEeCC------CCcEEEEEEc--CCEEEEEeCCCeEEEEECCCC--ceEe-eCCccEEEEEEcCCCcEEEEEcCC
Q psy7057         150 GKCVHTMYGH------PNFIYSVAAH--GDLITSGGEDQCVCVYQNKAQ--NSFM-IPAMSVWAVAILPNSDIVTGSSDG  218 (557)
Q Consensus       150 ~~~~~~~~~h------~~~V~~l~~~--~~~l~s~s~Dg~I~iwd~~~~--~~~~-~~~~~v~~v~~~p~g~l~sg~~Dg  218 (557)
                      ++.. .+...      ...|.++..+  +..|..|+. +-+..++..+.  ..+. .....|.++...++|.|..|+.+|
T Consensus       175 ~~~~-~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~~G  252 (758)
T 3ott_A          175 GKFE-GIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLAGTDNG  252 (758)
T ss_dssp             TEEE-EECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEEEETTE
T ss_pred             CceE-EecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEEEeCCc
Confidence            6533 22211      2348888774  455666664 45778886554  2221 123458888888888888787554


Q ss_pred             cEEEEecCCC
Q psy7057         219 IVRVFSANPD  228 (557)
Q Consensus       219 ~I~iwd~~~~  228 (557)
                       +.+++..+.
T Consensus       253 -l~~~~~~~~  261 (758)
T 3ott_A          253 -LYVYHNDTT  261 (758)
T ss_dssp             -EEEECCTTS
T ss_pred             -eeEEecCCC
Confidence             777876654

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=96.63  E-value=0.24  Score=51.18  Aligned_cols=211  Identities=11%  Similarity=0.033  Sum_probs=116.2

Q ss_pred             cEEEEEEcCC---CcEEEEECCCcEEEEcCCC---------------CCCCCCCCEEEEEECCC----e-EEEEECCCCe
Q psy7057          14 DVRSLSVTPD---GCILSASRDKSAKLWKPND---------------LSPGAKVNTLLSASWDM----T-AKLWCLESQQ   70 (557)
Q Consensus        14 ~V~~l~~spd---g~l~sgs~Dg~V~iWd~~~---------------~~~~~~~~~l~sgs~Dg----~-i~iwd~~~~~   70 (557)
                      .-..|+|+|+   +.|+.+...+.|+.+++.+               ++++++++ |+.+...+    . +...+...+.
T Consensus       140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~  218 (433)
T 4hw6_A          140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGF  218 (433)
T ss_dssp             CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTT
T ss_pred             CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCe
Confidence            4568999985   6677665558899998854               44555666 33333211    1 2222221111


Q ss_pred             E-EEEEcccCCcEEEEEEcC-CCE-EEEEECCCeEEEEeCC-CcEEEEEe--CCCCCEEEEEEeCCCe-EE-EEECCCeE
Q psy7057          71 C-KLTIRQHEMAVWGVIQLA-NGI-IVTGCADKTIKLHSEE-GEFLKTLT--GHTDCVRGLAVLNDTD-FV-SCSNDASI  142 (557)
Q Consensus        71 ~-~~~l~~h~~~V~~l~~~~-~~~-l~sgs~dg~I~vwd~~-~~~~~~l~--~h~~~V~~l~~~~~~~-lv-s~s~Dg~I  142 (557)
                      . ...+. .-.....+++.| ++. +++-..++.|+.++.. +.....+.  +....-..|+++|++. |+ +-.....|
T Consensus       219 ~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I  297 (433)
T 4hw6_A          219 TERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCI  297 (433)
T ss_dssp             CCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEE
T ss_pred             ecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEE
Confidence            0 01111 223345678888 664 4454567789999865 55423322  1222345799999976 44 55567889


Q ss_pred             EEEECC--CCeE--EEEEeCC---------------CCcEEEEEE---------cC--CEEEEEeCCCeEEEEECCCC-c
Q psy7057         143 RVWDST--TGKC--VHTMYGH---------------PNFIYSVAA---------HG--DLITSGGEDQCVCVYQNKAQ-N  191 (557)
Q Consensus       143 ~vwd~~--~~~~--~~~~~~h---------------~~~V~~l~~---------~~--~~l~s~s~Dg~I~iwd~~~~-~  191 (557)
                      +.++..  ++..  ...+.+.               -.....+++         +.  .++++-...++|+.++.... .
T Consensus       298 ~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~~G~v~  377 (433)
T 4hw6_A          298 YRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTPEGRVT  377 (433)
T ss_dssp             EEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECTTSEEE
T ss_pred             EEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECCCCCEE
Confidence            998754  2321  1222221               112456776         33  34555556678888884322 2


Q ss_pred             eEeeC------------------CccEEEEEEc-CCCcEEEEE-cCCcEEEEecC
Q psy7057         192 SFMIP------------------AMSVWAVAIL-PNSDIVTGS-SDGIVRVFSAN  226 (557)
Q Consensus       192 ~~~~~------------------~~~v~~v~~~-p~g~l~sg~-~Dg~I~iwd~~  226 (557)
                      .+.+.                  -.....|++. +++.|+.+. ..+.||.++++
T Consensus       378 t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e  432 (433)
T 4hw6_A          378 TYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE  432 (433)
T ss_dssp             EEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred             EEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence            22211                  1236789999 667755444 56778887754

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=96.50  E-value=0.41  Score=49.44  Aligned_cols=181  Identities=14%  Similarity=0.047  Sum_probs=105.1

Q ss_pred             CCCCCC--CCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCCEEEEEECCC----e-EEEEeCCCcEE--E
Q psy7057          43 LSPGAK--VNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADK----T-IKLHSEEGEFL--K  113 (557)
Q Consensus        43 ~~~~~~--~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~~l~sgs~dg----~-I~vwd~~~~~~--~  113 (557)
                      +.++++  ...|+.+...+.|+.+++.++.... +........++++.+++.|+.+...+    . +...+..+...  .
T Consensus       144 vavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~-~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~~~~  222 (433)
T 4hw6_A          144 MMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDI-KTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFTERL  222 (433)
T ss_dssp             EEECTTTTTCEEEEECBTSCEEEEETTTTEEEE-ECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTCCEE
T ss_pred             EEEccccCCCEEEEEeCCCCEEEEECCCCEEEE-eecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCeeccc
Confidence            556653  4555555544889999987776543 44455678899999988444444321    2 33333221111  1


Q ss_pred             EEeCCCCCEEEEEEeC-CCeEE-EEECCCeEEEEECCCCeEEEEEeC--CCCcEEEEEE--cCC-EEEEEeCCCeEEEEE
Q psy7057         114 TLTGHTDCVRGLAVLN-DTDFV-SCSNDASIRVWDSTTGKCVHTMYG--HPNFIYSVAA--HGD-LITSGGEDQCVCVYQ  186 (557)
Q Consensus       114 ~l~~h~~~V~~l~~~~-~~~lv-s~s~Dg~I~vwd~~~~~~~~~~~~--h~~~V~~l~~--~~~-~l~s~s~Dg~I~iwd  186 (557)
                      .+. .-.....++++| ++.|. +-..++.|+.+|..++.....+..  ....-..|++  +++ ++++-...+.|+.++
T Consensus       223 ~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~  301 (433)
T 4hw6_A          223 SLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVD  301 (433)
T ss_dssp             EEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred             ccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEe
Confidence            121 233456788888 67766 444667899999877766333321  1222345777  566 455555678999987


Q ss_pred             CCC--C-----ceEeeC---------------CccEEEEEE---------cCCCcEEEE-EcCCcEEEEec
Q psy7057         187 NKA--Q-----NSFMIP---------------AMSVWAVAI---------LPNSDIVTG-SSDGIVRVFSA  225 (557)
Q Consensus       187 ~~~--~-----~~~~~~---------------~~~v~~v~~---------~p~g~l~sg-~~Dg~I~iwd~  225 (557)
                      ...  .     ..+.+.               -.....+++         .+++.|..+ ...+.|+.++.
T Consensus       302 ~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~  372 (433)
T 4hw6_A          302 YNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP  372 (433)
T ss_dssp             BCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT
T ss_pred             CCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC
Confidence            431  1     122221               123567888         666775544 45678888875

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=96.49  E-value=0.11  Score=56.11  Aligned_cols=181  Identities=12%  Similarity=0.075  Sum_probs=114.5

Q ss_pred             CCEEEEEEC-CCeEEEEEC-CCCeEEEEEcccCCc-----------EEEEEEcC-CCE----EEEEECCCeEEEEe-CCC
Q psy7057          49 VNTLLSASW-DMTAKLWCL-ESQQCKLTIRQHEMA-----------VWGVIQLA-NGI----IVTGCADKTIKLHS-EEG  109 (557)
Q Consensus        49 ~~~l~sgs~-Dg~i~iwd~-~~~~~~~~l~~h~~~-----------V~~l~~~~-~~~----l~sgs~dg~I~vwd-~~~  109 (557)
                      +..++.++. ++.|.-+|. .+|+.+.++......           ...+++.| ++.    |+.++.|+.+..+| .+|
T Consensus        62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG  141 (599)
T 1w6s_A           62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG  141 (599)
T ss_dssp             TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred             CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence            567788887 899999999 899998887643211           12244433 335    88899999999999 688


Q ss_pred             cEEEEEeCCC----CCEEE-EEEeCCCeEEEEE------CCCeEEEEECCCCeEEEEEeCCCCc----------------
Q psy7057         110 EFLKTLTGHT----DCVRG-LAVLNDTDFVSCS------NDASIRVWDSTTGKCVHTMYGHPNF----------------  162 (557)
Q Consensus       110 ~~~~~l~~h~----~~V~~-l~~~~~~~lvs~s------~Dg~I~vwd~~~~~~~~~~~~h~~~----------------  162 (557)
                      +.+.......    ..+.+ -.+ .++.++.++      .++.|+-+|.++|+.+-++......                
T Consensus       142 ~~~W~~~~~~~~~~~~~~ssP~v-~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~  220 (599)
T 1w6s_A          142 ETVWKVENSDIKVGSTLTIAPYV-VKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHY  220 (599)
T ss_dssp             CEEEEEECCCGGGTCBCCSCCEE-ETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGG
T ss_pred             CEEEeecCCCCCccceeecCCEE-ECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCccccccccccccccccc
Confidence            8877654322    12221 112 246666554      3899999999999998877643211                


Q ss_pred             ---------------------EE-EEEE--cCCEEEEEeCC----------------CeEEEEECCCCceE---ee--CC
Q psy7057         163 ---------------------IY-SVAA--HGDLITSGGED----------------QCVCVYQNKAQNSF---MI--PA  197 (557)
Q Consensus       163 ---------------------V~-~l~~--~~~~l~s~s~D----------------g~I~iwd~~~~~~~---~~--~~  197 (557)
                                           ++ .+++  ....++.++.+                +.|..+|..+.+..   +.  |.
T Consensus       221 g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d  300 (599)
T 1w6s_A          221 GQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHD  300 (599)
T ss_dssp             CCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTC
T ss_pred             cccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCc
Confidence                                 11 2233  44566666554                37888887766322   11  11


Q ss_pred             --------ccEEEEEEc-CCC---c-EEEEEcCCcEEEEecCCCCcc
Q psy7057         198 --------MSVWAVAIL-PNS---D-IVTGSSDGIVRVFSANPDRQA  231 (557)
Q Consensus       198 --------~~v~~v~~~-p~g---~-l~sg~~Dg~I~iwd~~~~~~~  231 (557)
                              .++. +... .+|   . ++.++.+|.++++|..+++.+
T Consensus       301 ~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l  346 (599)
T 1w6s_A          301 EWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALV  346 (599)
T ss_dssp             SSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEE
T ss_pred             cccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEe
Confidence                    1121 2222 456   4 566889999999999888754

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=96.47  E-value=1.1  Score=50.13  Aligned_cols=174  Identities=10%  Similarity=-0.035  Sum_probs=106.7

Q ss_pred             ECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcC-CC-EEEEEECCCeEEEEeCCCc-----EEEEEeCCCCCEEEEEEe
Q psy7057          56 SWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLA-NG-IIVTGCADKTIKLHSEEGE-----FLKTLTGHTDCVRGLAVL  128 (557)
Q Consensus        56 s~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~-~~-~l~sgs~dg~I~vwd~~~~-----~~~~l~~h~~~V~~l~~~  128 (557)
                      +....|+..++........+. ....+..|++.+ .+ ++++-...+.|+.+++.+.     ....+.........|++.
T Consensus       401 an~~~Ir~i~l~~~~~~~l~~-~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD  479 (791)
T 3m0c_C          401 TNRHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVD  479 (791)
T ss_dssp             ECBSSEEEECTTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEE
T ss_pred             ccccceeEeeccCCcceeeec-CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeee
Confidence            345567888877655444343 455677899988 44 5555556678888886652     223333344567789988


Q ss_pred             CCC-e-EEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEEcC--CEEEEEe-CC-CeEEEEECCCC-c-eEee-CCcc
Q psy7057         129 NDT-D-FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHG--DLITSGG-ED-QCVCVYQNKAQ-N-SFMI-PAMS  199 (557)
Q Consensus       129 ~~~-~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~~~--~~l~s~s-~D-g~I~iwd~~~~-~-~~~~-~~~~  199 (557)
                      +.+ . +++-...+.|.+.++........+...-.....|+++.  ..|+... .. +.|...++... . .+.. .-..
T Consensus       480 ~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~  559 (791)
T 3m0c_C          480 WIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQW  559 (791)
T ss_dssp             TTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSC
T ss_pred             ecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCC
Confidence            664 4 44666778999999875443333333445678888843  3444443 33 67888886544 2 2222 2246


Q ss_pred             EEEEEEcCCCc-EEEE-EcCCcEEEEecCCCCc
Q psy7057         200 VWAVAILPNSD-IVTG-SSDGIVRVFSANPDRQ  230 (557)
Q Consensus       200 v~~v~~~p~g~-l~sg-~~Dg~I~iwd~~~~~~  230 (557)
                      ...|++.+.+. |+.+ ...+.|..++++....
T Consensus       560 P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~  592 (791)
T 3m0c_C          560 PNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR  592 (791)
T ss_dssp             EEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred             ceEEEEecCCCeEEEEeCCCCcEEEEecCCCce
Confidence            88999997655 5444 4567788888875443

>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*

Probab=96.38  E-value=0.46  Score=47.62  Aligned_cols=202  Identities=13%  Similarity=0.023  Sum_probs=109.2

Q ss_pred             ccEEEEEEcCCCcEEEEECCCcEEEEcCCC-------------------CCCCCC---CCEEEEEEC----C----CeEE
Q psy7057          13 MDVRSLSVTPDGCILSASRDKSAKLWKPND-------------------LSPGAK---VNTLLSASW----D----MTAK   62 (557)
Q Consensus        13 ~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~-------------------~~~~~~---~~~l~sgs~----D----g~i~   62 (557)
                      ..-++|+|.|+|+|+.+..+|.|++++...                   ++++++   +..|..+..    +    ..|.
T Consensus        29 ~~P~~ia~~pdG~l~V~e~~g~I~~~d~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~  108 (354)
T 3a9g_A           29 EVPWSIAPLGGGRYLVTERPGRLVLISPSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVI  108 (354)
T ss_dssp             SCEEEEEEEETTEEEEEETTTEEEEECSSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEE
T ss_pred             CCCeEEEEcCCCeEEEEeCCCEEEEEeCCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEE
Confidence            456899999999988888889999886321                   344444   344444332    2    5666


Q ss_pred             EEECCCC-------eEEE-EEcc-cCCcEEEEEEcCCC-EEEEEEC-------------CCeEEEEeCCCcE--------
Q psy7057          63 LWCLESQ-------QCKL-TIRQ-HEMAVWGVIQLANG-IIVTGCA-------------DKTIKLHSEEGEF--------  111 (557)
Q Consensus        63 iwd~~~~-------~~~~-~l~~-h~~~V~~l~~~~~~-~l~sgs~-------------dg~I~vwd~~~~~--------  111 (557)
                      .|+....       +.+. .+.. .......++|.|+| ++++-+.             .+.|..++.++..        
T Consensus       109 r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~  188 (354)
T 3a9g_A          109 RGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPN  188 (354)
T ss_dssp             EEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTT
T ss_pred             EEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCC
Confidence            6776543       1111 1221 11234578999999 4443221             2456666655431        


Q ss_pred             -EEEEeCCCCCEEEEEEeC-CCeEEEEECCC----eEEEEECCC--------C--------eEEEEEeCCCCcEEEEEE-
Q psy7057         112 -LKTLTGHTDCVRGLAVLN-DTDFVSCSNDA----SIRVWDSTT--------G--------KCVHTMYGHPNFIYSVAA-  168 (557)
Q Consensus       112 -~~~l~~h~~~V~~l~~~~-~~~lvs~s~Dg----~I~vwd~~~--------~--------~~~~~~~~h~~~V~~l~~-  168 (557)
                       .....+|. ....++|+| ++.|.++....    .|.+.....        +        .++..+.........+++ 
T Consensus       189 ~~i~a~G~r-np~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~~y  267 (354)
T 3a9g_A          189 SPIWSYGHR-NPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGASFV  267 (354)
T ss_dssp             CCEEEECCS-CCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEEEEC
T ss_pred             CcEEEEccC-CcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcceEEE
Confidence             11223443 356789999 57766554332    243332100        0        122233112234566666 


Q ss_pred             --------cCCEEEEEeCCCeEEEEECCCC-c-----eEe-eCCccEEEEEEcCCCcEEEEE
Q psy7057         169 --------HGDLITSGGEDQCVCVYQNKAQ-N-----SFM-IPAMSVWAVAILPNSDIVTGS  215 (557)
Q Consensus       169 --------~~~~l~s~s~Dg~I~iwd~~~~-~-----~~~-~~~~~v~~v~~~p~g~l~sg~  215 (557)
                              ++.++++.-..+.|...++... .     .+. .....+..+++.|+|.|..+.
T Consensus       268 ~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~  329 (354)
T 3a9g_A          268 HGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILIST  329 (354)
T ss_dssp             CSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEE
T ss_pred             CCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEE
Confidence                    3455666566678888876532 1     111 113468888999988855444

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=96.35  E-value=0.036  Score=60.77  Aligned_cols=202  Identities=11%  Similarity=0.091  Sum_probs=106.1

Q ss_pred             cEEEEEEcCCCc-EEEEE-CCCcEEEEcCCC-----------------CCCCCCCCEEEEEE-CC-----CeEEEEECCC
Q psy7057          14 DVRSLSVTPDGC-ILSAS-RDKSAKLWKPND-----------------LSPGAKVNTLLSAS-WD-----MTAKLWCLES   68 (557)
Q Consensus        14 ~V~~l~~spdg~-l~sgs-~Dg~V~iWd~~~-----------------~~~~~~~~~l~sgs-~D-----g~i~iwd~~~   68 (557)
                      ...++++..+++ ++.|+ .+..+.+||..+                 ....+++..++.|+ .+     ..+.+||+.+
T Consensus       244 ~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t  323 (656)
T 1k3i_A          244 FCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSS  323 (656)
T ss_dssp             SSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTT
T ss_pred             ccccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCC
Confidence            344577788888 55666 456899999765                 11223677888888 44     5689999987


Q ss_pred             CeEEEEEcc-----cCCcEEEEEEcCCC-EEEEEECC---------CeEEEEeCCC-cEEEEEeCCC---------CCEE
Q psy7057          69 QQCKLTIRQ-----HEMAVWGVIQLANG-IIVTGCAD---------KTIKLHSEEG-EFLKTLTGHT---------DCVR  123 (557)
Q Consensus        69 ~~~~~~l~~-----h~~~V~~l~~~~~~-~l~sgs~d---------g~I~vwd~~~-~~~~~l~~h~---------~~V~  123 (557)
                      .+-.. +..     ....-....+..++ .++.|+.+         ..+..||... ........+.         ..-.
T Consensus       324 ~~W~~-~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~  402 (656)
T 1k3i_A          324 KTWTS-LPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGN  402 (656)
T ss_dssp             TEEEE-ETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCE
T ss_pred             Cccee-CCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCc
Confidence            65332 210     00000001111233 44445444         4566777332 2222221111         1234


Q ss_pred             EEEEeC-CCe-EEEEECCC-----------eEEEEECCCCeEEEEE--eCCCCc--EEEEEE-cCCEEEEEeCC------
Q psy7057         124 GLAVLN-DTD-FVSCSNDA-----------SIRVWDSTTGKCVHTM--YGHPNF--IYSVAA-HGDLITSGGED------  179 (557)
Q Consensus       124 ~l~~~~-~~~-lvs~s~Dg-----------~I~vwd~~~~~~~~~~--~~h~~~--V~~l~~-~~~~l~s~s~D------  179 (557)
                      ++.+.. +++ ++.|+.++           .|.+||..+.+-....  ..+...  ..++.. ++++++.|+.+      
T Consensus       403 av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~  482 (656)
T 1k3i_A          403 AVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFE  482 (656)
T ss_dssp             EEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTC
T ss_pred             eEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcC
Confidence            444433 566 44666432           6788888776544332  112222  233444 78888888754      


Q ss_pred             -----CeEEEEECCCC--ceEe---eCCccEEEEEEcCCCc-EEEEEc
Q psy7057         180 -----QCVCVYQNKAQ--NSFM---IPAMSVWAVAILPNSD-IVTGSS  216 (557)
Q Consensus       180 -----g~I~iwd~~~~--~~~~---~~~~~v~~v~~~p~g~-l~sg~~  216 (557)
                           ..+.+||..+.  ..+.   .+.....+..+.|+++ ++.||.
T Consensus       483 ~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~  530 (656)
T 1k3i_A          483 DSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG  530 (656)
T ss_dssp             CCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred             CCCcccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence                 46889996554  2221   1112233455678998 566664

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=96.21  E-value=1.1  Score=50.07  Aligned_cols=177  Identities=13%  Similarity=0.008  Sum_probs=108.1

Q ss_pred             cccEEEEEEcCC-CcEE-EEECCCcEEEEcCCC--------------------CCCCCCCCEEE-EEECCCeEEEEECCC
Q psy7057          12 SMDVRSLSVTPD-GCIL-SASRDKSAKLWKPND--------------------LSPGAKVNTLL-SASWDMTAKLWCLES   68 (557)
Q Consensus        12 ~~~V~~l~~spd-g~l~-sgs~Dg~V~iWd~~~--------------------~~~~~~~~~l~-sgs~Dg~i~iwd~~~   68 (557)
                      ...+..|+|.+. ++|+ +-...+.|+.+++..                    ++++..+..|+ +-...+.|.+.++..
T Consensus       423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG  502 (791)
T 3m0c_C          423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG  502 (791)
T ss_dssp             CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred             CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCC
Confidence            345678899874 4544 555567777777642                    33443444444 444567888888875


Q ss_pred             CeEEEEEcccCCcEEEEEEcCC-CEEEEEEC-C-CeEEEEeCCCcEEEEEeC-CCCCEEEEEEeCC-CeEE-EEECCCeE
Q psy7057          69 QQCKLTIRQHEMAVWGVIQLAN-GIIVTGCA-D-KTIKLHSEEGEFLKTLTG-HTDCVRGLAVLND-TDFV-SCSNDASI  142 (557)
Q Consensus        69 ~~~~~~l~~h~~~V~~l~~~~~-~~l~sgs~-d-g~I~vwd~~~~~~~~l~~-h~~~V~~l~~~~~-~~lv-s~s~Dg~I  142 (557)
                      ......+...-.....|++.|. +.|....+ . +.|...++.|.....+.. .-.....|++.+. ++|+ +-.....|
T Consensus       503 ~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I  582 (791)
T 3m0c_C          503 VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSI  582 (791)
T ss_dssp             SSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred             CeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcE
Confidence            5443334344556889999986 55555543 2 678888888877666543 3357899999965 5555 44556789


Q ss_pred             EEEECCCCeEEEEEeC--CCCcEEEEEEcCCEE-EEEeCCCeEEEEECC
Q psy7057         143 RVWDSTTGKCVHTMYG--HPNFIYSVAAHGDLI-TSGGEDQCVCVYQNK  188 (557)
Q Consensus       143 ~vwd~~~~~~~~~~~~--h~~~V~~l~~~~~~l-~s~s~Dg~I~iwd~~  188 (557)
                      ...++........+..  .-....+|++.++.| ++-...+.|...+..
T Consensus       583 ~~~d~dG~~~~~v~~~~~~l~~P~glav~~~~lYwtD~~~~~I~~~dk~  631 (791)
T 3m0c_C          583 SSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRL  631 (791)
T ss_dssp             EEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETT
T ss_pred             EEEecCCCceEEEecCCCccCCCCEEEEeCCEEEEEECCCCEEEEEeCC
Confidence            9999864433333332  223455777755544 444566777777743

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=96.19  E-value=0.15  Score=56.87  Aligned_cols=178  Identities=10%  Similarity=0.063  Sum_probs=100.3

Q ss_pred             CCCC-CCCCEEEEEEC-CC----eEEEEECCCC-eEEE-EEcccCCcEEEEEEcCCC-EEEEEECC-----CeEEEEeCC
Q psy7057          43 LSPG-AKVNTLLSASW-DM----TAKLWCLESQ-QCKL-TIRQHEMAVWGVIQLANG-IIVTGCAD-----KTIKLHSEE  108 (557)
Q Consensus        43 ~~~~-~~~~~l~sgs~-Dg----~i~iwd~~~~-~~~~-~l~~h~~~V~~l~~~~~~-~l~sgs~d-----g~I~vwd~~  108 (557)
                      ..++ |++++|+-+.. +|    +|+++|+.++ +.+. .+.   .....++|+|++ .|+..+.+     ..|.++++.
T Consensus       179 ~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lg  255 (751)
T 2xe4_A          179 VKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMG  255 (751)
T ss_dssp             EEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEEEETT
T ss_pred             eEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEEEECC
Confidence            4567 88988775443 33    5999999988 6221 111   112357899998 55555554     246677754


Q ss_pred             Cc---EEEEEe-CCCCCEEEEEEeCCCe-EE-EEE--CCCeEEEEECCCC--eE-EEEE-eCCCCcEEEEEE-cCCEEEE
Q psy7057         109 GE---FLKTLT-GHTDCVRGLAVLNDTD-FV-SCS--NDASIRVWDSTTG--KC-VHTM-YGHPNFIYSVAA-HGDLITS  175 (557)
Q Consensus       109 ~~---~~~~l~-~h~~~V~~l~~~~~~~-lv-s~s--~Dg~I~vwd~~~~--~~-~~~~-~~h~~~V~~l~~-~~~~l~s  175 (557)
                      +.   ....+. ........+.|+|+++ |+ +..  ....|.++|+.++  +. +..+ .......+++.+ .++.|+.
T Consensus       256 t~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~  335 (751)
T 2xe4_A          256 KLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHLVI  335 (751)
T ss_dssp             SCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTEEEE
T ss_pred             CCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCEEEE
Confidence            32   122222 2334567889999987 44 332  2345888898765  23 1333 334556677774 5665554


Q ss_pred             EeC-C----CeEEEEECCC--C-ce-EeeCCc--cEEEEEEcCCCc-EEEEEcCCcEEEEe
Q psy7057         176 GGE-D----QCVCVYQNKA--Q-NS-FMIPAM--SVWAVAILPNSD-IVTGSSDGIVRVFS  224 (557)
Q Consensus       176 ~s~-D----g~I~iwd~~~--~-~~-~~~~~~--~v~~v~~~p~g~-l~sg~~Dg~I~iwd  224 (557)
                      .+. +    ..|..+++..  . +. +..+..  .+..+.+.. +. +++...++..+||-
T Consensus       336 ~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~-~~lv~~~~~~g~~~l~~  395 (751)
T 2xe4_A          336 LTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRS-NYLVVAGRRAGLTRIWT  395 (751)
T ss_dssp             EECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEECS-SEEEEEEEETTEEEEEE
T ss_pred             EeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEEC-CEEEEEEEeCCEEEEEE
Confidence            443 3    2567777653  2 44 444433  345555542 23 56777788755554

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=96.19  E-value=0.93  Score=45.14  Aligned_cols=176  Identities=11%  Similarity=0.155  Sum_probs=112.9

Q ss_pred             CCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCC----C----EEEEEEC---CCeEEEEeC--CCcEEE
Q psy7057          47 AKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLAN----G----IIVTGCA---DKTIKLHSE--EGEFLK  113 (557)
Q Consensus        47 ~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~----~----~l~sgs~---dg~I~vwd~--~~~~~~  113 (557)
                      +...+++.....+-+.+||+ +|+.+..+..  ..+..+..-|+    +    ++++...   +++|++|++  ....+.
T Consensus        38 p~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~  114 (355)
T 3amr_A           38 PQNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQ  114 (355)
T ss_dssp             GGGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEE
T ss_pred             CCccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCcee
Confidence            34566777788889999999 7888888864  45666665552    2    2233333   578999963  333455


Q ss_pred             EEeC------CC-CCEEEEEE--eCC-Ce--EEEEECCCeEEEEECC-------CCeEEEEEeCCCCcEEEEEEc--CCE
Q psy7057         114 TLTG------HT-DCVRGLAV--LND-TD--FVSCSNDASIRVWDST-------TGKCVHTMYGHPNFIYSVAAH--GDL  172 (557)
Q Consensus       114 ~l~~------h~-~~V~~l~~--~~~-~~--lvs~s~Dg~I~vwd~~-------~~~~~~~~~~h~~~V~~l~~~--~~~  172 (557)
                      .+..      .. ..+..+|+  ++. +.  ++....+|.+..|++.       +.+.+++|.. .+.+..+..+  ...
T Consensus       115 ~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~  193 (355)
T 3amr_A          115 SMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGR  193 (355)
T ss_dssp             ECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTE
T ss_pred             eccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCe
Confidence            4421      11 55677787  664 43  4577888999999882       3466777764 4567777774  458


Q ss_pred             EEEEeCCCeEEEEECC-----CCceEee-----CCccEEEEEEc--CCCc--EEEEE-cCCcEEEEecC
Q psy7057         173 ITSGGEDQCVCVYQNK-----AQNSFMI-----PAMSVWAVAIL--PNSD--IVTGS-SDGIVRVFSAN  226 (557)
Q Consensus       173 l~s~s~Dg~I~iwd~~-----~~~~~~~-----~~~~v~~v~~~--p~g~--l~sg~-~Dg~I~iwd~~  226 (557)
                      |+.+-++.-|..++.+     +...+..     ....+-.|++-  ++++  +++++ .+++..+|+..
T Consensus       194 Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~  262 (355)
T 3amr_A          194 LYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ  262 (355)
T ss_dssp             EEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred             EEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence            9999999777666733     1222221     12357777774  4444  55555 57799999986

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=96.19  E-value=0.7  Score=45.62  Aligned_cols=153  Identities=10%  Similarity=0.140  Sum_probs=98.9

Q ss_pred             EcccCCcEEEEEEcC-CCEEEEEE-CCCeEEEEeCCCc-EEEEEeCC-----C--CCEEEEEE---eCCCeEEEEEC---
Q psy7057          75 IRQHEMAVWGVIQLA-NGIIVTGC-ADKTIKLHSEEGE-FLKTLTGH-----T--DCVRGLAV---LNDTDFVSCSN---  138 (557)
Q Consensus        75 l~~h~~~V~~l~~~~-~~~l~sgs-~dg~I~vwd~~~~-~~~~l~~h-----~--~~V~~l~~---~~~~~lvs~s~---  138 (557)
                      +........+++|.+ ++.+..++ ..++|..|+..+. ........     .  ..+..|.+   .|+++|+.+..   
T Consensus         8 ~~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~   87 (334)
T 2p9w_A            8 VKVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAK   87 (334)
T ss_dssp             ECCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETT
T ss_pred             ecCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccc
Confidence            344445556788877 45666555 7899999997643 33222222     1  13678999   57888664333   


Q ss_pred             -----------CCeEEEEECC---CCeEEEEEe--CC-----------CCcEEEEEE--cCCEEEEEeCC-CeEEEEECC
Q psy7057         139 -----------DASIRVWDST---TGKCVHTMY--GH-----------PNFIYSVAA--HGDLITSGGED-QCVCVYQNK  188 (557)
Q Consensus       139 -----------Dg~I~vwd~~---~~~~~~~~~--~h-----------~~~V~~l~~--~~~~l~s~s~D-g~I~iwd~~  188 (557)
                                 +..|..+|+.   +++.+....  ..           ......++.  +|+..++++.. +.|...+..
T Consensus        88 af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pd  167 (334)
T 2p9w_A           88 SFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSAD  167 (334)
T ss_dssp             TTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTT
T ss_pred             cccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCC
Confidence                       6779999998   777665543  11           124667777  67888888877 777777744


Q ss_pred             CC--ceEeeC------CccEEEEEEcCCCc-EEEEEcCCcEEEEecCC
Q psy7057         189 AQ--NSFMIP------AMSVWAVAILPNSD-IVTGSSDGIVRVFSANP  227 (557)
Q Consensus       189 ~~--~~~~~~------~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~  227 (557)
                      ..  ..+...      ....+.++++|++. |++....|.|..+|+..
T Consensus       168 G~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~  215 (334)
T 2p9w_A          168 GKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK  215 (334)
T ss_dssp             SCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred             CCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence            32  211111      12356899999998 66665699999999874

>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}

Probab=96.14  E-value=0.78  Score=45.83  Aligned_cols=211  Identities=12%  Similarity=0.099  Sum_probs=111.8

Q ss_pred             ccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------------CCCCCC---CCEEEEE-EC-------C
Q psy7057          13 MDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------------LSPGAK---VNTLLSA-SW-------D   58 (557)
Q Consensus        13 ~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------------~~~~~~---~~~l~sg-s~-------D   58 (557)
                      ..-+.|+|.|+|+ |+.+...|.|++++...                      ++++|+   ...|..+ +.       .
T Consensus        18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~   97 (353)
T 2g8s_A           18 DHPWALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG   97 (353)
T ss_dssp             SSEEEEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred             CCcEEEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence            4568999999999 99999999999987432                      233332   2333332 22       1


Q ss_pred             CeEEEEECCCC--e--EEEE-Ecc------cCCcEEEEEEcCCCEEEEEECC--------------CeEEEEeCCCc---
Q psy7057          59 MTAKLWCLESQ--Q--CKLT-IRQ------HEMAVWGVIQLANGIIVTGCAD--------------KTIKLHSEEGE---  110 (557)
Q Consensus        59 g~i~iwd~~~~--~--~~~~-l~~------h~~~V~~l~~~~~~~l~sgs~d--------------g~I~vwd~~~~---  110 (557)
                      ..|..|++...  .  .... +..      .......|+|.|+|.|..+..|              +.|.-++.++.   
T Consensus        98 ~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~  177 (353)
T 2g8s_A           98 TAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPD  177 (353)
T ss_dssp             EEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCT
T ss_pred             eEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCC
Confidence            24555555432  1  1111 111      1122357999999944444332              45666665543   


Q ss_pred             ----------EEEE-EeCCCCCEEEEEEeC-CCeEEEEECCC--eEEEEECCCC--------------------------
Q psy7057         111 ----------FLKT-LTGHTDCVRGLAVLN-DTDFVSCSNDA--SIRVWDSTTG--------------------------  150 (557)
Q Consensus       111 ----------~~~~-l~~h~~~V~~l~~~~-~~~lvs~s~Dg--~I~vwd~~~~--------------------------  150 (557)
                                .... -.+| .....++|.| .+.|.++....  .=.|.-+..+                          
T Consensus       178 ~npf~~~~~~~~~i~a~G~-rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~~~  256 (353)
T 2g8s_A          178 DNPFIKESGVRAEIWSYGI-RNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGEI  256 (353)
T ss_dssp             TCTTTTSTTSCTTEEEECC-SEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCBSS
T ss_pred             CCCCcCCCCCCccEEEEcC-cCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccCCC
Confidence                      1111 1234 3478899999 67766544321  1122111111                          


Q ss_pred             -----eEEEEEeCCCCcEEEEEE---------cCCEEEEEeCCCeEEEEECCCCc-----eEe-eCCccEEEEEEcCCCc
Q psy7057         151 -----KCVHTMYGHPNFIYSVAA---------HGDLITSGGEDQCVCVYQNKAQN-----SFM-IPAMSVWAVAILPNSD  210 (557)
Q Consensus       151 -----~~~~~~~~h~~~V~~l~~---------~~~~l~s~s~Dg~I~iwd~~~~~-----~~~-~~~~~v~~v~~~p~g~  210 (557)
                           .++..+. +......+.+         .+.++++.-..+.|...++....     .+. .....+..+++.|+|.
T Consensus       257 ~~~~~~P~~~~~-~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~  335 (353)
T 2g8s_A          257 VAGTEQPVFYWK-DSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGY  335 (353)
T ss_dssp             CTTSCCCSEEES-SCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSC
T ss_pred             CCCccCCeEEeC-CCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCc
Confidence                 1122232 2335566776         25566666677777777754331     111 1224688999999999


Q ss_pred             EEEEEcCCcEEEEec
Q psy7057         211 IVTGSSDGIVRVFSA  225 (557)
Q Consensus       211 l~sg~~Dg~I~iwd~  225 (557)
                      |..++.+..=+||.+
T Consensus       336 lyv~td~~~g~I~ri  350 (353)
T 2g8s_A          336 LYVLTDESSGELLKV  350 (353)
T ss_dssp             EEEEECSTTEEEEEE
T ss_pred             EEEEEeCCCCEEEEE
Confidence            666544333345544

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=96.13  E-value=0.97  Score=42.96  Aligned_cols=155  Identities=12%  Similarity=0.053  Sum_probs=100.6

Q ss_pred             EEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEeCCCcEEEEEeC-CCCCEEEEEEeCCCeEEEEE-CCCeEEEEECCC
Q psy7057          74 TIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHSEEGEFLKTLTG-HTDCVRGLAVLNDTDFVSCS-NDASIRVWDSTT  149 (557)
Q Consensus        74 ~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~~~~~~~~l~~-h~~~V~~l~~~~~~~lvs~s-~Dg~I~vwd~~~  149 (557)
                      .+.+-...+..+++.|++  ++++...++.|...|.+++.++.+.- -....-.|++.+++.++.++ .++.+.++++..
T Consensus        21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~  100 (255)
T 3qqz_A           21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTP  100 (255)
T ss_dssp             ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETTCCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECT
T ss_pred             ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCCCCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCC
Confidence            455666789999999865  56667788889999988888887742 22457888888888876444 567888888754


Q ss_pred             Ce---EEEEEe------CCCCcEEEEEEc--CCEEEEEeCCCe--EEEEEC--CCC-ceEee--------CCccEEEEEE
Q psy7057         150 GK---CVHTMY------GHPNFIYSVAAH--GDLITSGGEDQC--VCVYQN--KAQ-NSFMI--------PAMSVWAVAI  205 (557)
Q Consensus       150 ~~---~~~~~~------~h~~~V~~l~~~--~~~l~s~s~Dg~--I~iwd~--~~~-~~~~~--------~~~~v~~v~~  205 (557)
                      ..   .+....      ........|+++  ++.|+++.+...  |+.|+.  ... ..+..        +...+.++++
T Consensus       101 ~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~  180 (255)
T 3qqz_A          101 NSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEF  180 (255)
T ss_dssp             TCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEE
T ss_pred             CCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEE
Confidence            33   223332      123345788984  446666665544  455551  111 11111        1224688999


Q ss_pred             cCCCc--EEEEEcCCcEEEEecCCC
Q psy7057         206 LPNSD--IVTGSSDGIVRVFSANPD  228 (557)
Q Consensus       206 ~p~g~--l~sg~~Dg~I~iwd~~~~  228 (557)
                      .|...  ++.+...+.|.++|....
T Consensus       181 dp~tg~lliLS~~s~~L~~~d~~g~  205 (255)
T 3qqz_A          181 NQQKNTLLVLSHESRALQEVTLVGE  205 (255)
T ss_dssp             ETTTTEEEEEETTTTEEEEECTTCC
T ss_pred             cCCCCeEEEEECCCCeEEEEcCCCC
Confidence            99765  566677888888987754

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=96.04  E-value=1.3  Score=43.57  Aligned_cols=211  Identities=8%  Similarity=-0.067  Sum_probs=118.5

Q ss_pred             CCeEEEEECCCCe--EEEEEcccCCcEEEEEEcCC-C-EEEEEECCCeEEEEeCCCcE--EEEEeCCCCCEEEEEEeC-C
Q psy7057          58 DMTAKLWCLESQQ--CKLTIRQHEMAVWGVIQLAN-G-IIVTGCADKTIKLHSEEGEF--LKTLTGHTDCVRGLAVLN-D  130 (557)
Q Consensus        58 Dg~i~iwd~~~~~--~~~~l~~h~~~V~~l~~~~~-~-~l~sgs~dg~I~vwd~~~~~--~~~l~~h~~~V~~l~~~~-~  130 (557)
                      ...|+..++....  ....+. ....+.+++|.+. + ++++-...+.|..++..+..  ...+...-.....+++.+ .
T Consensus        12 ~~~I~~i~l~~~~~~~~~~~~-~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~   90 (318)
T 3sov_A           12 RRDLRLVDATNGKENATIVVG-GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLG   90 (318)
T ss_dssp             EEEEEEEETTCTTSCCEEEEE-EEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTT
T ss_pred             cCeEEEEECCCCceEEEEEec-CCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCC
Confidence            5678888887653  222222 2235668899874 4 55665667889888865542  122222234567788886 4


Q ss_pred             CeEE-EEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEEc--CCEEEEEe--CCCeEEEEECCCC--ceEe-eCCccEEE
Q psy7057         131 TDFV-SCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAH--GDLITSGG--EDQCVCVYQNKAQ--NSFM-IPAMSVWA  202 (557)
Q Consensus       131 ~~lv-s~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~~--~~~l~s~s--~Dg~I~iwd~~~~--~~~~-~~~~~v~~  202 (557)
                      +.|+ +-...+.|.++++........+...-.....++++  +..|+.+.  ..+.|...++...  ..+. ..-.....
T Consensus        91 g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Png  170 (318)
T 3sov_A           91 EKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNG  170 (318)
T ss_dssp             TEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEE
T ss_pred             CeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccE
Confidence            5544 65667889999976433322233344566788884  34454444  3578888886533  2222 22235689


Q ss_pred             EEEcCCCc-EE-EEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCC
Q psy7057         203 VAILPNSD-IV-TGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPD  273 (557)
Q Consensus       203 v~~~p~g~-l~-sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~  273 (557)
                      ++++|++. |. +=+..+.|..++++........  .........+...  .....++-...+.|..++...+
T Consensus       171 lavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~--~~~~~~P~glav~--~~~lywtd~~~~~V~~~~~~~G  239 (318)
T 3sov_A          171 LTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVV--KGSLPHPFALTLF--EDILYWTDWSTHSILACNKYTG  239 (318)
T ss_dssp             EEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE--CSCCSCEEEEEEE--TTEEEEEETTTTEEEEEETTTC
T ss_pred             EEEeccCCEEEEEECCCCEEEEEcCCCCceEEEe--cCCCCCceEEEEe--CCEEEEEecCCCeEEEEECCCC
Confidence            99998655 44 4455788999998753322111  1111222233322  2233345455667777766433

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=95.88  E-value=2.1  Score=46.47  Aligned_cols=174  Identities=10%  Similarity=0.001  Sum_probs=110.2

Q ss_pred             ccEEEEEEcCCC-cEE-EEECCCcEEEEcCCC----------------CCCCCCCCEEE-EEECCCeEEEEECCCCeEEE
Q psy7057          13 MDVRSLSVTPDG-CIL-SASRDKSAKLWKPND----------------LSPGAKVNTLL-SASWDMTAKLWCLESQQCKL   73 (557)
Q Consensus        13 ~~V~~l~~spdg-~l~-sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~-sgs~Dg~i~iwd~~~~~~~~   73 (557)
                      .....|+|.+.+ +|+ +-..++.|..+++..                ++.+..+..|+ +-...+.|.+.++.......
T Consensus        37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~  116 (628)
T 4a0p_A           37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQV  116 (628)
T ss_dssp             SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEE
T ss_pred             CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEE
Confidence            356789999854 444 555678888887654                33333334443 33445778888876543322


Q ss_pred             EEcccCCcEEEEEEcC-CCEEEEEEC--CCeEEEEeCCCcEEEEEeCCCCCEEEEEEeCC-CeEE-EEECCCeEEEEECC
Q psy7057          74 TIRQHEMAVWGVIQLA-NGIIVTGCA--DKTIKLHSEEGEFLKTLTGHTDCVRGLAVLND-TDFV-SCSNDASIRVWDST  148 (557)
Q Consensus        74 ~l~~h~~~V~~l~~~~-~~~l~sgs~--dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~-~~lv-s~s~Dg~I~vwd~~  148 (557)
                      .+...-.....|++.| .|.|....+  .+.|...+.+|.....+...-.....|++.++ ++|. +-...+.|...|+.
T Consensus       117 l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~d  196 (628)
T 4a0p_A          117 LVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNML  196 (628)
T ss_dssp             EECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred             EEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCC
Confidence            2333445678999998 555555553  46777777777765555545567899999986 5544 55667889999986


Q ss_pred             CCeEEEEEeCCCCcEEEEEEcCCEEE-EEeCCCeEEEEEC
Q psy7057         149 TGKCVHTMYGHPNFIYSVAAHGDLIT-SGGEDQCVCVYQN  187 (557)
Q Consensus       149 ~~~~~~~~~~h~~~V~~l~~~~~~l~-s~s~Dg~I~iwd~  187 (557)
                      .... ..+.........|++++..|+ +-...+.|...|.
T Consensus       197 G~~~-~v~~~~l~~P~glav~~~~ly~tD~~~~~I~~~dk  235 (628)
T 4a0p_A          197 GLNR-EVIADDLPHPFGLTQYQDYIYWTDWSRRSIERANK  235 (628)
T ss_dssp             SCSC-EEEEECCSCEEEEEEETTEEEEEETTTTEEEEEET
T ss_pred             CCce-EEeeccCCCceEEEEECCEEEEecCCCCEEEEEEC
Confidence            5433 334334445568887555544 4445788888884

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=95.69  E-value=1.8  Score=42.64  Aligned_cols=141  Identities=11%  Similarity=0.056  Sum_probs=87.1

Q ss_pred             CCEEEEEE-CCCeEEEEECCCCeEEEE-Ecc----c--CCcEEEEEE---cCCC-EEEEEE-------------CCCeEE
Q psy7057          49 VNTLLSAS-WDMTAKLWCLESQQCKLT-IRQ----H--EMAVWGVIQ---LANG-IIVTGC-------------ADKTIK  103 (557)
Q Consensus        49 ~~~l~sgs-~Dg~i~iwd~~~~~~~~~-l~~----h--~~~V~~l~~---~~~~-~l~sgs-------------~dg~I~  103 (557)
                      ...+..++ ..++|..|+...+..... +.+    .  ...+..|.+   .|++ ++++..             .+..+.
T Consensus        24 ~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~  103 (334)
T 2p9w_A           24 RQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFH  103 (334)
T ss_dssp             TTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEE
T ss_pred             CCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEE
Confidence            44455554 677888887765433222 221    1  124578999   4777 444333             257788


Q ss_pred             EEeCC----CcEEEEEe--CC-----------CCCEEEEEEeCCCe-EEEEECC-CeEEEEECCCCeEEEEEeCC-----
Q psy7057         104 LHSEE----GEFLKTLT--GH-----------TDCVRGLAVLNDTD-FVSCSND-ASIRVWDSTTGKCVHTMYGH-----  159 (557)
Q Consensus       104 vwd~~----~~~~~~l~--~h-----------~~~V~~l~~~~~~~-lvs~s~D-g~I~vwd~~~~~~~~~~~~h-----  159 (557)
                      .+|+.    ++.+....  ..           ......+++.++|. +++++.. +.|...+.. ++.+..+...     
T Consensus       104 ~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pd-G~~~~~~~~~~~~~~  182 (334)
T 2p9w_A          104 SFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSAD-GKTVSTFAWESGNGG  182 (334)
T ss_dssp             EEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTT-SCCEEEEEECCCCSS
T ss_pred             EEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCC-CCEEeeeeecCCCcc
Confidence            89965    66654433  11           12478899999977 7778888 888888754 4433333211     


Q ss_pred             -CCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC
Q psy7057         160 -PNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ  190 (557)
Q Consensus       160 -~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~  190 (557)
                       ......|++  ++..|++....+.|..+|+...
T Consensus       183 ~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p  216 (334)
T 2p9w_A          183 QRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP  216 (334)
T ss_dssp             SCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred             cccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence             112457777  5778887767999999997755

>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...

Probab=95.51  E-value=3.5  Score=48.07  Aligned_cols=212  Identities=12%  Similarity=0.109  Sum_probs=125.1

Q ss_pred             CeEEEEECCCCeEEEEEccc-CCcEEEEEEc---CC--CEEEEEE----------CCCeEEEEeCCCcEEEEE--eCCCC
Q psy7057          59 MTAKLWCLESQQCKLTIRQH-EMAVWGVIQL---AN--GIIVTGC----------ADKTIKLHSEEGEFLKTL--TGHTD  120 (557)
Q Consensus        59 g~i~iwd~~~~~~~~~l~~h-~~~V~~l~~~---~~--~~l~sgs----------~dg~I~vwd~~~~~~~~l--~~h~~  120 (557)
                      +.|++.|..+++.+..+.-. ...+.|++..   .+  .+++.|+          ..|.|.+++.....+..+  ....+
T Consensus       807 s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g  886 (1158)
T 3ei3_A          807 HNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKG  886 (1158)
T ss_dssp             EEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESS
T ss_pred             EEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCC
Confidence            35788888888776655422 3445555432   22  3777776          357799988433333222  23467


Q ss_pred             CEEEEEEeCCCeEEEEECCCeEEEEECCCCeEEE-EEeCCCC-cEEEEEEcCCEEEEEeCCCeEEEEE--CCCC--ceEe
Q psy7057         121 CVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVH-TMYGHPN-FIYSVAAHGDLITSGGEDQCVCVYQ--NKAQ--NSFM  194 (557)
Q Consensus       121 ~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~~~~-~~~~h~~-~V~~l~~~~~~l~s~s~Dg~I~iwd--~~~~--~~~~  194 (557)
                      +|++++-.. |+|++|- ..+|++|++...+.++ ....+.. .+..+...+++++.|..-..|.++.  ....  ..+.
T Consensus       887 ~v~al~~~~-g~Lla~i-g~~l~vy~l~~~~~L~~~~~~~~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~L~~~a  964 (1158)
T 3ei3_A          887 AVYSMVEFN-GKLLASI-NSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIA  964 (1158)
T ss_dssp             CEEEEEEET-TEEEEEE-TTEEEEEEECTTSCEEEEEEECCCSCEEEEEEETTEEEEEESSBCEEEEEEETTTTEEEEEE
T ss_pred             cCEEEeeeC-CEEEEEc-CCEEEEEECCCCceEEEEeeccccEEEEEEeccCCEEEEEEhhheEEEEEEEcCCCeEEEEE
Confidence            899998664 5666554 4789999987655333 1111222 1345656788999998877777654  3322  2222


Q ss_pred             --eCCccEEEEEEcCCCcEEEEEcCCcEEEEecCCCCcchhHHH------hcc-cceeEEEec---cCCC--------ce
Q psy7057         195 --IPAMSVWAVAILPNSDIVTGSSDGIVRVFSANPDRQAEDAVQ------AQY-AEEVKKLKS---ANEQ--------EI  254 (557)
Q Consensus       195 --~~~~~v~~v~~~p~g~l~sg~~Dg~I~iwd~~~~~~~~~~~~------~~~-~~~v~~l~~---~~~~--------~~  254 (557)
                        .....++++.+..+..++.+..+|.|.+..............      .-| ...++++..   ....        ..
T Consensus       965 ~D~~~~~vta~~~ld~~t~l~aD~~gNl~vl~~~~~~~~~~~~~~L~~~~~fhlG~~vt~~~~~sl~~~~~~~~~~~~~~ 1044 (1158)
T 3ei3_A          965 RDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQG 1044 (1158)
T ss_dssp             ECCSCBCEEEEEEEETTEEEEEETTSEEEEEEECTTCCSTTGGGBEEEEEEEECSSCEEEEEECCSCCC-------CEEE
T ss_pred             eecccccEEEEEEEccCcEEEEcCCCcEEEEecCCCCCCccccceeeeEEEEeCCCcEeeEEeeeeecCCCccccccccc
Confidence              234468888888777788899999999998876422111000      001 123333321   1111        23


Q ss_pred             eEEEEeCCCcEEEEecCC
Q psy7057         255 GGVKVSDDGIVRVFSANP  272 (557)
Q Consensus       255 ~~vs~s~DG~IrvW~~~~  272 (557)
                      .++-++.+|.|-+.-.-+
T Consensus      1045 ~il~~T~~GsIg~l~pl~ 1062 (1158)
T 3ei3_A         1045 SVLFGTVNGMIGLVTSLS 1062 (1158)
T ss_dssp             EEEEEETTSCEEEEEEEC
T ss_pred             eEEEEecCCEEEEEEEcC
Confidence            467889999998876544

>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}

Probab=95.26  E-value=2.8  Score=43.86  Aligned_cols=214  Identities=11%  Similarity=0.036  Sum_probs=121.7

Q ss_pred             EEEEEEcCC--CcEEEEEC-CCcEEEEcCCC-------------------CCC-------CCCCCEEEEEECCC------
Q psy7057          15 VRSLSVTPD--GCILSASR-DKSAKLWKPND-------------------LSP-------GAKVNTLLSASWDM------   59 (557)
Q Consensus        15 V~~l~~spd--g~l~sgs~-Dg~V~iWd~~~-------------------~~~-------~~~~~~l~sgs~Dg------   59 (557)
                      -..|+|+|.  +.|+.+.. .+.|++.|+..                   +++       +++++.|+.+...+      
T Consensus       141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~  220 (496)
T 3kya_A          141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDES  220 (496)
T ss_dssp             EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGE
T ss_pred             CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccC
Confidence            568999984  44655544 46788887765                   334       66777677666654      


Q ss_pred             -eEEEEECCC-CeEE-----EEEcccCCcEEEEEEcC-CC-EEEEEECCCeEEEEeCC--------CcE-----------
Q psy7057          60 -TAKLWCLES-QQCK-----LTIRQHEMAVWGVIQLA-NG-IIVTGCADKTIKLHSEE--------GEF-----------  111 (557)
Q Consensus        60 -~i~iwd~~~-~~~~-----~~l~~h~~~V~~l~~~~-~~-~l~sgs~dg~I~vwd~~--------~~~-----------  111 (557)
                       .|.+++... +...     ..+.... ....++..| ++ ++++-..++.|..+|..        +..           
T Consensus       221 ~~V~~i~r~~~G~~~~~~~~~~v~~~~-~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~  299 (496)
T 3kya_A          221 PSVYIIKRNADGTFDDRSDIQLIAAYK-QCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNT  299 (496)
T ss_dssp             EEEEEEECCTTSCCSTTSCEEEEEEES-CCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTT
T ss_pred             ceEEEEecCCCCceeecccceeeccCC-CceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccc
Confidence             255554333 1111     1121111 234667788 44 56666678889999853        332           


Q ss_pred             EEE-Ee-CCCCCEEEEEEeCCCe--EEEEECCCeEEEEEC--CCCeE--EEEEeCC---C------------CcEE-EEE
Q psy7057         112 LKT-LT-GHTDCVRGLAVLNDTD--FVSCSNDASIRVWDS--TTGKC--VHTMYGH---P------------NFIY-SVA  167 (557)
Q Consensus       112 ~~~-l~-~h~~~V~~l~~~~~~~--lvs~s~Dg~I~vwd~--~~~~~--~~~~~~h---~------------~~V~-~l~  167 (557)
                      ... +. +.....+.|+++|++.  +++-+....|+.++.  .++..  ..++.+.   .            .... .++
T Consensus       300 ~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~  379 (496)
T 3kya_A          300 FKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVF  379 (496)
T ss_dssp             EEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEE
T ss_pred             cceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEE
Confidence            112 21 2234568999999987  345566788988654  33322  1233221   1            1223 333


Q ss_pred             Ec---------CCEEEEEeCCCeEEEEECCCC-ceEeeC------------------------CccEEEEEEcCC-CcEE
Q psy7057         168 AH---------GDLITSGGEDQCVCVYQNKAQ-NSFMIP------------------------AMSVWAVAILPN-SDIV  212 (557)
Q Consensus       168 ~~---------~~~l~s~s~Dg~I~iwd~~~~-~~~~~~------------------------~~~v~~v~~~p~-g~l~  212 (557)
                      .+         +.++++=....+|+.++.... .++.+.                        -.....|++.++ +.|+
T Consensus       380 vd~~~~~~~~~g~lyVaD~~N~rIr~i~~~G~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~ly  459 (496)
T 3kya_A          380 VKNPDYTGEEEYDFYFVDRLNFCVRKVTPEGIVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFY  459 (496)
T ss_dssp             EECTTCCSSCCEEEEEEEGGGTEEEEECTTCBEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEE
T ss_pred             EccccccccCCCeEEEEECCCCEEEEEeCCCCEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEE
Confidence            33         345556567788999884322 333221                        023678999996 7755


Q ss_pred             EEE-cCCcEEEEecCCCC
Q psy7057         213 TGS-SDGIVRVFSANPDR  229 (557)
Q Consensus       213 sg~-~Dg~I~iwd~~~~~  229 (557)
                      .+. ....||.+++....
T Consensus       460 VaD~~N~rIrki~~~~~~  477 (496)
T 3kya_A          460 VHDQVGHTIRTISMEQEE  477 (496)
T ss_dssp             EEETTTTEEEEEEECCCC
T ss_pred             EEeCCCCEEEEEECCCCc
Confidence            554 56789999887653

>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}

Probab=95.01  E-value=4.1  Score=42.59  Aligned_cols=233  Identities=9%  Similarity=0.072  Sum_probs=124.6

Q ss_pred             CCCCCC-CCEEEEE-ECCCeEEEEECCCCeEEEEEccc---CCcEEEEEE-------cCCC-EEEEEECCC-------eE
Q psy7057          43 LSPGAK-VNTLLSA-SWDMTAKLWCLESQQCKLTIRQH---EMAVWGVIQ-------LANG-IIVTGCADK-------TI  102 (557)
Q Consensus        43 ~~~~~~-~~~l~sg-s~Dg~i~iwd~~~~~~~~~l~~h---~~~V~~l~~-------~~~~-~l~sgs~dg-------~I  102 (557)
                      ++++|. ...|+.+ ...+.|++.|++++.....+...   ......++|       .+++ .|+.+...+       .|
T Consensus       144 la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V  223 (496)
T 3kya_A          144 LAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSV  223 (496)
T ss_dssp             EEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEE
T ss_pred             EEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceE
Confidence            556652 3444444 44477899998887655444322   235889999       8888 466666554       25


Q ss_pred             EEEeCCC--cEE-----EEEeCCCCCEEEEEEeCC-CeEE-EEECCCeEEEEECC-------CCeE-----------EEE
Q psy7057         103 KLHSEEG--EFL-----KTLTGHTDCVRGLAVLND-TDFV-SCSNDASIRVWDST-------TGKC-----------VHT  155 (557)
Q Consensus       103 ~vwd~~~--~~~-----~~l~~h~~~V~~l~~~~~-~~lv-s~s~Dg~I~vwd~~-------~~~~-----------~~~  155 (557)
                      .+.+...  ...     ..+... .....++++|+ +.|+ +-..++.|..+|+.       ++..           ...
T Consensus       224 ~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~  302 (496)
T 3kya_A          224 YIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQ  302 (496)
T ss_dssp             EEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEE
T ss_pred             EEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccce
Confidence            5665222  221     122211 23456788884 5544 66677889999987       4543           122


Q ss_pred             -Ee-CCCCcEEEEEE--cCCE-EEEEeCCCeEEEEEC--CCC-----ceEeeC---C------------ccEE-EEEEc-
Q psy7057         156 -MY-GHPNFIYSVAA--HGDL-ITSGGEDQCVCVYQN--KAQ-----NSFMIP---A------------MSVW-AVAIL-  206 (557)
Q Consensus       156 -~~-~h~~~V~~l~~--~~~~-l~s~s~Dg~I~iwd~--~~~-----~~~~~~---~------------~~v~-~v~~~-  206 (557)
                       +. +.....+.|++  +++. +++-+....|+.++.  ...     ..+.+.   .            .... .++.. 
T Consensus       303 l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~  382 (496)
T 3kya_A          303 LFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKN  382 (496)
T ss_dssp             EEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEEC
T ss_pred             eEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEcc
Confidence             21 22344578888  6674 555567788988663  221     122221   0            1234 45554 


Q ss_pred             ------CCCcEE-EEEcCCcEEEEecCCCCcchhHHH---------------------hcccceeEEEeccCCCceeEEE
Q psy7057         207 ------PNSDIV-TGSSDGIVRVFSANPDRQAEDAVQ---------------------AQYAEEVKKLKSANEQEIGGVK  258 (557)
Q Consensus       207 ------p~g~l~-sg~~Dg~I~iwd~~~~~~~~~~~~---------------------~~~~~~v~~l~~~~~~~~~~vs  258 (557)
                            +++.|+ +=....+||.++.. +........                     .........++..+......|+
T Consensus       383 ~~~~~~~~g~lyVaD~~N~rIr~i~~~-G~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVa  461 (496)
T 3kya_A          383 PDYTGEEEYDFYFVDRLNFCVRKVTPE-GIVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVH  461 (496)
T ss_dssp             TTCCSSCCEEEEEEEGGGTEEEEECTT-CBEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEE
T ss_pred             ccccccCCCeEEEEECCCCEEEEEeCC-CCEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEE
Confidence                  456654 44457889999843 322111000                     0011123344444433444566


Q ss_pred             EeCCCcEEEEecCCChhhH
Q psy7057         259 VSDDGIVRVFSANPDRQAE  277 (557)
Q Consensus       259 ~s~DG~IrvW~~~~~~~~~  277 (557)
                      =+....||.++++.+....
T Consensus       462 D~~N~rIrki~~~~~~~~~  480 (496)
T 3kya_A          462 DQVGHTIRTISMEQEENVA  480 (496)
T ss_dssp             ETTTTEEEEEEECCCC---
T ss_pred             eCCCCEEEEEECCCCcccc
Confidence            6667788888887765543

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=94.85  E-value=5.4  Score=43.15  Aligned_cols=182  Identities=8%  Similarity=-0.089  Sum_probs=109.6

Q ss_pred             CCCCCCEEEEE-ECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCC-C-EEEEEECCCeEEEEeCCCcEEEEEe-CCCC
Q psy7057          45 PGAKVNTLLSA-SWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLAN-G-IIVTGCADKTIKLHSEEGEFLKTLT-GHTD  120 (557)
Q Consensus        45 ~~~~~~~l~sg-s~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~-~-~l~sgs~dg~I~vwd~~~~~~~~l~-~h~~  120 (557)
                      +++..+.|+.+ ..++.|..+++........+.........+++.+. + ++++-...+.|.+.+.+|.....+. ..-.
T Consensus        44 ~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~  123 (628)
T 4a0p_A           44 FDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLD  123 (628)
T ss_dssp             EETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCC
T ss_pred             EECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCC
Confidence            34444444444 44677888887654433333333345667888754 3 5566666788999998776554443 3445


Q ss_pred             CEEEEEEeCC-CeEEEEEC--CCeEEEEECCCCeEEEEEeCCCCcEEEEEEc--CCEE-EEEeCCCeEEEEECCCC--ce
Q psy7057         121 CVRGLAVLND-TDFVSCSN--DASIRVWDSTTGKCVHTMYGHPNFIYSVAAH--GDLI-TSGGEDQCVCVYQNKAQ--NS  192 (557)
Q Consensus       121 ~V~~l~~~~~-~~lvs~s~--Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~~--~~~l-~s~s~Dg~I~iwd~~~~--~~  192 (557)
                      ..+.|++.|. +.|..+.+  .+.|...++.... ...+...-.....|+++  +..| ++-...+.|..+++...  +.
T Consensus       124 ~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~-~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~v  202 (628)
T 4a0p_A          124 SPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSE-RTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREV  202 (628)
T ss_dssp             CEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS-CEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred             CcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCc-eEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCceEE
Confidence            6899999985 66654443  4678888875433 23333344566788884  4444 45556778999986543  33


Q ss_pred             EeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCC
Q psy7057         193 FMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPD  228 (557)
Q Consensus       193 ~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~  228 (557)
                      +.........+++.. +. +++-...+.|...+..++
T Consensus       203 ~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg  238 (628)
T 4a0p_A          203 IADDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSG  238 (628)
T ss_dssp             EEECCSCEEEEEEET-TEEEEEETTTTEEEEEETTTC
T ss_pred             eeccCCCceEEEEEC-CEEEEecCCCCEEEEEECCCC
Confidence            333334556778765 44 445445778888876544

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=94.22  E-value=4.1  Score=40.46  Aligned_cols=176  Identities=15%  Similarity=0.218  Sum_probs=106.0

Q ss_pred             EEEEEECCCeEEEEeCCCcEEEEEeCCCCCEEEEEEeCC----Ce---EE--EEEC--CCeEEEEEC--CCCeEEEEEeC
Q psy7057          92 IIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLND----TD---FV--SCSN--DASIRVWDS--TTGKCVHTMYG  158 (557)
Q Consensus        92 ~l~sgs~dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~----~~---lv--s~s~--Dg~I~vwd~--~~~~~~~~~~~  158 (557)
                      +++.....+-+.++|++|+.+..+..  +.+..+.+-|+    ++   ++  +.-.  +.+|++|++  .+++ +..+..
T Consensus        42 ~ii~t~k~~gL~Vydl~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~i~~  118 (355)
T 3amr_A           42 KLITTNKKSGLVVYSLDGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQSMTD  118 (355)
T ss_dssp             EEEEEETTTEEEEEETTSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEECSC
T ss_pred             EEEEEcCCCCEEEEcCCCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eeeccc
Confidence            67777788899999999999998864  55777776653    22   33  3334  578999976  3333 444421


Q ss_pred             ------CC-CcEEEEEE--c---CC-EEEEEeCCCeEEEEECC---CC-------ceEeeCCccEEEEEEcCCCc-EEEE
Q psy7057         159 ------HP-NFIYSVAA--H---GD-LITSGGEDQCVCVYQNK---AQ-------NSFMIPAMSVWAVAILPNSD-IVTG  214 (557)
Q Consensus       159 ------h~-~~V~~l~~--~---~~-~l~s~s~Dg~I~iwd~~---~~-------~~~~~~~~~v~~v~~~p~g~-l~sg  214 (557)
                            .. ..++.+|+  +   +. ++++...+|.+..|++.   ..       +++.. ...+-.+.+.+... |+.+
T Consensus       119 ~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~Lyv~  197 (355)
T 3amr_A          119 PDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGRLYIA  197 (355)
T ss_dssp             TTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTEEEEE
T ss_pred             cccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCeEEEe
Confidence                  11 44555665  3   33 68888889999999852   21       33333 34677777877654 8888


Q ss_pred             EcCCcEEEEecCCCC-----cchhHHHhcccceeEEEecc--CCCceeEEEEe-CCCcEEEEecC
Q psy7057         215 SSDGIVRVFSANPDR-----QAEDAVQAQYAEEVKKLKSA--NEQEIGGVKVS-DDGIVRVFSAN  271 (557)
Q Consensus       215 ~~Dg~I~iwd~~~~~-----~~~~~~~~~~~~~v~~l~~~--~~~~~~~vs~s-~DG~IrvW~~~  271 (557)
                      -++.-|..++.+...     .............+..+...  +...-++++.| .+.++.||+..
T Consensus       198 eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~  262 (355)
T 3amr_A          198 EEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ  262 (355)
T ss_dssp             ETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred             cccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence            888665555544322     11111112223345555442  22332344444 78899999986

>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*

Probab=94.20  E-value=2.5  Score=42.21  Aligned_cols=147  Identities=11%  Similarity=0.121  Sum_probs=86.8

Q ss_pred             cEEEEEEcCCCEEEEEE-------------CCCeEEEEeCC---CcEE-EEEeC-----CCCCEEEEEEeC--CC--eEE
Q psy7057          81 AVWGVIQLANGIIVTGC-------------ADKTIKLHSEE---GEFL-KTLTG-----HTDCVRGLAVLN--DT--DFV  134 (557)
Q Consensus        81 ~V~~l~~~~~~~l~sgs-------------~dg~I~vwd~~---~~~~-~~l~~-----h~~~V~~l~~~~--~~--~lv  134 (557)
                      ....+...++|++++++             .+|.|.++|..   ++.. ..+.+     ..-....|.+.+  ++  .|+
T Consensus        51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~  130 (355)
T 3sre_A           51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL  130 (355)
T ss_dssp             CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred             CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence            34466678888766666             68999999954   2221 12222     123567777755  34  344


Q ss_pred             EE-EC--CCeEEEEECCCC--e--EEEEEeCC-CCcEEEEEE--cCCEEEEEe-----------------CCCeEEEEEC
Q psy7057         135 SC-SN--DASIRVWDSTTG--K--CVHTMYGH-PNFIYSVAA--HGDLITSGG-----------------EDQCVCVYQN  187 (557)
Q Consensus       135 s~-s~--Dg~I~vwd~~~~--~--~~~~~~~h-~~~V~~l~~--~~~~l~s~s-----------------~Dg~I~iwd~  187 (557)
                      .+ ..  +.+|.+|++...  .  .+.++.+. -.....+.+  +|.++++..                 ..+.|..++.
T Consensus       131 Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~  210 (355)
T 3sre_A          131 VVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP  210 (355)
T ss_dssp             EEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT
T ss_pred             EEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC
Confidence            33 32  467778776542  2  23344432 235677777  555555543                 1255666666


Q ss_pred             CCCceEeeCCccEEEEEEcCCCc-E-EEEEcCCcEEEEecCC
Q psy7057         188 KAQNSFMIPAMSVWAVAILPNSD-I-VTGSSDGIVRVFSANP  227 (557)
Q Consensus       188 ~~~~~~~~~~~~v~~v~~~p~g~-l-~sg~~Dg~I~iwd~~~  227 (557)
                      .+...+...-...+.++|+|+++ + ++-+..+.|+.|++..
T Consensus       211 ~~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~  252 (355)
T 3sre_A          211 NDVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHA  252 (355)
T ss_dssp             TCCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred             CeEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECC
Confidence            54444433334678999999997 4 4555678999999874

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=94.01  E-value=7.6  Score=41.86  Aligned_cols=184  Identities=8%  Similarity=-0.051  Sum_probs=102.7

Q ss_pred             CCCCCCEEEEEEC-CCeEEEEECCCCeE-EEEEcccCCcEEEEEEcCC-C-EEEEEECCCeEEEEeCCCcEEEEEe-CCC
Q psy7057          45 PGAKVNTLLSASW-DMTAKLWCLESQQC-KLTIRQHEMAVWGVIQLAN-G-IIVTGCADKTIKLHSEEGEFLKTLT-GHT  119 (557)
Q Consensus        45 ~~~~~~~l~sgs~-Dg~i~iwd~~~~~~-~~~l~~h~~~V~~l~~~~~-~-~l~sgs~dg~I~vwd~~~~~~~~l~-~h~  119 (557)
                      +++..+.|+.+.. .+.|..+++..... ...+...-.....+++.+. + ++++-...+.|.+.+.+|.....+. ..-
T Consensus        47 ~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l  126 (619)
T 3s94_A           47 FVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQEL  126 (619)
T ss_dssp             EETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSC
T ss_pred             EEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCC
Confidence            3334455554443 46777777765432 2233333357888999884 4 5556666789999998887655554 444


Q ss_pred             CCEEEEEEeCC-CeEEEEEC--CCeEEEEECCCCeEEEEEeCCCCcEEEEEEc--CCEE-EEEeCCCeEEEEECCCC--c
Q psy7057         120 DCVRGLAVLND-TDFVSCSN--DASIRVWDSTTGKCVHTMYGHPNFIYSVAAH--GDLI-TSGGEDQCVCVYQNKAQ--N  191 (557)
Q Consensus       120 ~~V~~l~~~~~-~~lvs~s~--Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~~--~~~l-~s~s~Dg~I~iwd~~~~--~  191 (557)
                      ...+.|++.|. +.|..+..  .+.|...++............-.....|+++  +..| ++=+..+.|..+++...  +
T Consensus       127 ~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~  206 (619)
T 3s94_A          127 DQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQ  206 (619)
T ss_dssp             SCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC
T ss_pred             CCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccE
Confidence            56789999986 66554443  3567777765332222222234456778884  4444 45456678888886543  2


Q ss_pred             eEee-CCccEEEEEEcCCCcEEEEEcCCcEEEEecCCC
Q psy7057         192 SFMI-PAMSVWAVAILPNSDIVTGSSDGIVRVFSANPD  228 (557)
Q Consensus       192 ~~~~-~~~~v~~v~~~p~g~l~sg~~Dg~I~iwd~~~~  228 (557)
                      .+.. .......+++..+.-+++-...+.|...+..++
T Consensus       207 ~~~~~~~~~P~gi~~~~~~ly~td~~~~~V~~~d~~tg  244 (619)
T 3s94_A          207 AVVKGSLPHPFALTLFEDILYWTDWSTHSILACNKYTG  244 (619)
T ss_dssp             ---------CCCEEESSSEEEEECTTTCSEEEEESSSC
T ss_pred             EEEeCCCCCceEEEEeCCEEEEecCCCCEEEEEECCCC
Confidence            1111 111224566655522444445677888776554

>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...

Probab=93.98  E-value=12  Score=43.58  Aligned_cols=251  Identities=14%  Similarity=0.097  Sum_probs=139.8

Q ss_pred             EEEEEcCCCcEEEEECCCcEEEEcCCC-----------------------CC---C-CCCCCEEEEEEC---CCeEEEEE
Q psy7057          16 RSLSVTPDGCILSASRDKSAKLWKPND-----------------------LS---P-GAKVNTLLSASW---DMTAKLWC   65 (557)
Q Consensus        16 ~~l~~spdg~l~sgs~Dg~V~iWd~~~-----------------------~~---~-~~~~~~l~sgs~---Dg~i~iwd   65 (557)
                      .|+++..+|.|+.||..|.=.+|.+..                       +.   . ......|++++.   +|++++..
T Consensus       330 ssl~~l~~g~lFvgS~~Gds~l~~~~~~~~~~~~~~~~~~~~~N~~PI~D~~v~d~~~~~~~~i~~~sG~g~~gsL~~lr  409 (1158)
T 3ei3_A          330 ECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR  409 (1158)
T ss_dssp             SEEEECSTTEEEEECSSSCEEEEEECSSCCTTSCCEEEEEEECCCCSEEEEEEECTTSSSCCEEEEEECCGGGCEEEEEE
T ss_pred             cEEEEECCCEEEEEEecCCcEEEEEecCCCCccceEEeEeeecCcCCceeEEEEccCCCCCCeEEEEECcCCCCeEEEEe
Confidence            566666777788898877766665542                       00   0 012235665553   57788775


Q ss_pred             CCCC-eEEEEEc-ccCCcEEEEEEcC----CCEEEEEECCCeEEEEeCCCcEEEEEe--CCC---CCEEEEEEeCCCeEE
Q psy7057          66 LESQ-QCKLTIR-QHEMAVWGVIQLA----NGIIVTGCADKTIKLHSEEGEFLKTLT--GHT---DCVRGLAVLNDTDFV  134 (557)
Q Consensus        66 ~~~~-~~~~~l~-~h~~~V~~l~~~~----~~~l~sgs~dg~I~vwd~~~~~~~~l~--~h~---~~V~~l~~~~~~~lv  134 (557)
                      -.=+ +....+. ..-..+|.+....    +.+|+.+..+.+ +++..+++.+..+.  +-.   ..+.+- -.+++.++
T Consensus       410 ~Gi~~~~~~~~~l~gv~~iWtl~~~~~~~~~~yLvlS~~~~T-~Vl~i~~e~veev~~~gf~~~~~TL~~~-~l~~~~iv  487 (1158)
T 3ei3_A          410 NGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQT-RVLMLNGEEVEETELMGFVDDQQTFFCG-NVAHQQLI  487 (1158)
T ss_dssp             ESBCEEEEEEECCCSCCEEEEECCCSSCSSCCEEEEEETTEE-EEEEEETTEEEEECCTTCCSSSCEEEEE-EETTTEEE
T ss_pred             cCCCEEEEEeecCCCccEEEEEeecCCCCCCCEEEEECCCCe-EEEEEeCCcccccccccccCCCCcEEEE-EcCCCeEE
Confidence            3222 1222221 1235677765432    236666666666 45544444444332  111   122222 22455566


Q ss_pred             EEECCCeEEEEECCCCeEEEEEeCC-CCcEEEEEEcCCEEEEEeCCCeEEEEECCCC--c--eEeeCCccEEEEEEcCCC
Q psy7057         135 SCSNDASIRVWDSTTGKCVHTMYGH-PNFIYSVAAHGDLITSGGEDQCVCVYQNKAQ--N--SFMIPAMSVWAVAILPNS  209 (557)
Q Consensus       135 s~s~Dg~I~vwd~~~~~~~~~~~~h-~~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~~--~--~~~~~~~~v~~v~~~p~g  209 (557)
                      =... ..|++.+......+..+... ...|...+.++..++.++ .+.+.++.+...  .  .-......|.|+++.|..
T Consensus       488 QVt~-~~Irli~~~~~~~~~~w~~p~~~~I~~As~n~~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~  565 (1158)
T 3ei3_A          488 QITS-ASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLG  565 (1158)
T ss_dssp             EEES-SCEEEEESSSCCEEEEECCTTCCCCCEEEECSSEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCS
T ss_pred             EEec-CEEEEEECCCCeEEEEEECCCCCEEEEEEeCCCEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCC
Confidence            4443 45888886666677777643 345777777667776665 677888765432  1  112235579999987632


Q ss_pred             ------c-EEEEEc-CCcEEEEecCCCCcchhHHHhc--ccceeEEEeccCCCceeEEEEeCCCcEEEEecCC
Q psy7057         210 ------D-IVTGSS-DGIVRVFSANPDRQAEDAVQAQ--YAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANP  272 (557)
Q Consensus       210 ------~-l~sg~~-Dg~I~iwd~~~~~~~~~~~~~~--~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~  272 (557)
                            + ++.|+. |++|+|+++...+.........  ...++..+..  .....+..|-.||.+..+.+++
T Consensus       566 ~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~--~~~~~L~igl~dG~l~~~~~d~  636 (1158)
T 3ei3_A          566 DSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTF--ESSHYLLCALGDGALFYFGLNI  636 (1158)
T ss_dssp             SSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEE--TTEEEEEEEETTSEEEEEEECT
T ss_pred             CCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEe--CCCcEEEEEeCCCeEEEEEEcC
Confidence                  3 778886 9999999998644332111111  1122222222  2345678888999988777664

>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}

Probab=93.71  E-value=0.1  Score=52.01  Aligned_cols=181  Identities=9%  Similarity=-0.010  Sum_probs=101.5

Q ss_pred             CCEEEEEECCCeEEEEECCCCeEEEEEccc-CCcEEEEEEc---CCCEEEEE--ECCCeEEEEeC-CCcEEEEEeC----
Q psy7057          49 VNTLLSASWDMTAKLWCLESQQCKLTIRQH-EMAVWGVIQL---ANGIIVTG--CADKTIKLHSE-EGEFLKTLTG----  117 (557)
Q Consensus        49 ~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h-~~~V~~l~~~---~~~~l~sg--s~dg~I~vwd~-~~~~~~~l~~----  117 (557)
                      +..++.++.||.|.-+|..+|+...++... ..++....-.   .++.++.+  +.||.+..++. +|.....+..    
T Consensus        10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv   89 (339)
T 2be1_A           10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLV   89 (339)
T ss_dssp             EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHH
T ss_pred             CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccce
Confidence            457899999999999999999999998754 1222221100   13334433  58999999984 4433332221    


Q ss_pred             CCCCEEE---EEE------eCCCeEEEEECCCeEEEEECCCCeEEEEEeCCC--C-----cEEEEE-------EcCCEEE
Q psy7057         118 HTDCVRG---LAV------LNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHP--N-----FIYSVA-------AHGDLIT  174 (557)
Q Consensus       118 h~~~V~~---l~~------~~~~~lvs~s~Dg~I~vwd~~~~~~~~~~~~h~--~-----~V~~l~-------~~~~~l~  174 (557)
                      ...++..   ..+      +.++.+++|+.++++...|+++|+.+.++....  .     ...|..       ..+..++
T Consensus        90 ~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~  169 (339)
T 2be1_A           90 STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIV  169 (339)
T ss_dssp             TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEE
T ss_pred             eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEE
Confidence            2223331   001      245678899999999999999999999986321  1     011111       1234566


Q ss_pred             EEeCCCeEEEEECCCCce----Ee---eCCc--cEE-EEEEcCCCcEEEEEcCCcEEEEecCCCCc
Q psy7057         175 SGGEDQCVCVYQNKAQNS----FM---IPAM--SVW-AVAILPNSDIVTGSSDGIVRVFSANPDRQ  230 (557)
Q Consensus       175 s~s~Dg~I~iwd~~~~~~----~~---~~~~--~v~-~v~~~p~g~l~sg~~Dg~I~iwd~~~~~~  230 (557)
                      .+..+..+.+.+ ++.+.    +.   ....  .+. .-..+.++.++.++.||.|..+|..++..
T Consensus       170 ig~~~y~v~~~~-~sG~~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~~~~~~dg~v~A~d~~~G~~  234 (339)
T 2be1_A          170 IGKTIFELGIHS-YDGASYNVTYSTWQQNVLDVPLALQNTFSKDGMCIAPFRDKSLLASDLDFRIA  234 (339)
T ss_dssp             EEEEEEECEECC-TTSCCCCCEEEEEECCTTTHHHHTTCSSCSSSCCEEEETTTEEEEECSTTCCE
T ss_pred             EecceEEEEEEC-CCCCeEEEecccccccccccccccccccccCCcEEEECCCCEEEEEECCCCcE
Confidence            666666666655 22110    00   0000  000 00001235556688899998888876654

>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}

Probab=93.58  E-value=6.4  Score=39.10  Aligned_cols=206  Identities=13%  Similarity=0.042  Sum_probs=106.9

Q ss_pred             eccCcccEEEEEEcCCCcEEEEEC-CCcEEEEcCCC----------------------CCCCCC---CCEEEEE-E--CC
Q psy7057           8 LYGHSMDVRSLSVTPDGCILSASR-DKSAKLWKPND----------------------LSPGAK---VNTLLSA-S--WD   58 (557)
Q Consensus         8 l~gH~~~V~~l~~spdg~l~sgs~-Dg~V~iWd~~~----------------------~~~~~~---~~~l~sg-s--~D   58 (557)
                      +...-..-+.|+|.|||+|+.+.. .|.|++++...                      ++++|+   ...|... +  .+
T Consensus        27 va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~  106 (347)
T 3das_A           27 VATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASD  106 (347)
T ss_dssp             EECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSS
T ss_pred             eecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCC
Confidence            333345678999999999777777 89999997542                      333332   2233322 2  23


Q ss_pred             CeEEEEECCC----------CeEEE-EEcc-cCCcEEEEEEcCCC-EEEEEE-------------CCCeEEEEeCCCcE-
Q psy7057          59 MTAKLWCLES----------QQCKL-TIRQ-HEMAVWGVIQLANG-IIVTGC-------------ADKTIKLHSEEGEF-  111 (557)
Q Consensus        59 g~i~iwd~~~----------~~~~~-~l~~-h~~~V~~l~~~~~~-~l~sgs-------------~dg~I~vwd~~~~~-  111 (557)
                      ..|.-|.+..          .+.+. .+.. .......|+|.|+| ++++.+             ..+.|.-.+.++.. 
T Consensus       107 ~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip  186 (347)
T 3das_A          107 NRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPA  186 (347)
T ss_dssp             EEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBC
T ss_pred             CEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCcc
Confidence            4454455443          12222 2221 12234568999999 444433             13455555544431 


Q ss_pred             --------EEEEeCCCCCEEEEEEeCCCeEEEEEC--CC--eEEEEE--------CCCC--------eEEEEEeCCCCcE
Q psy7057         112 --------LKTLTGHTDCVRGLAVLNDTDFVSCSN--DA--SIRVWD--------STTG--------KCVHTMYGHPNFI  163 (557)
Q Consensus       112 --------~~~l~~h~~~V~~l~~~~~~~lvs~s~--Dg--~I~vwd--------~~~~--------~~~~~~~~h~~~V  163 (557)
                              ...-.+|. ....++|+|++.|.++-.  |+  .|.+..        ...+        .++..+..+....
T Consensus       187 ~~nPf~~~~i~a~G~R-Np~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap  265 (347)
T 3das_A          187 PGNPFPGSPVYSYGHR-NVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEASP  265 (347)
T ss_dssp             TTCSSTTCCEEEBCCS-BCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTCCE
T ss_pred             CCCCCCCCeEEeeCCC-CcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCCCC
Confidence                    11223554 356789999888765543  22  132221        0011        1233333232456


Q ss_pred             EEEEE-cCCEEEEEeCCCeEEEEECCCC------ce-EeeCCccEEEEEEcCCCcEEEE
Q psy7057         164 YSVAA-HGDLITSGGEDQCVCVYQNKAQ------NS-FMIPAMSVWAVAILPNSDIVTG  214 (557)
Q Consensus       164 ~~l~~-~~~~l~s~s~Dg~I~iwd~~~~------~~-~~~~~~~v~~v~~~p~g~l~sg  214 (557)
                      ..|++ .+..++..-..+.|....+...      .. +......+..|+..|+|.|..+
T Consensus       266 ~G~~~~~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~  324 (347)
T 3das_A          266 SGIAYAEGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLV  324 (347)
T ss_dssp             EEEEEETTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEE
T ss_pred             cceEEEcCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEE
Confidence            67777 5555555555556655553322      11 1222346888888888874443

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=93.53  E-value=0.064  Score=59.33  Aligned_cols=171  Identities=10%  Similarity=-0.045  Sum_probs=93.8

Q ss_pred             CCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EE-EEEECCCeEEEEeCCC----cEEE-EEeCCCCCEEEEEEeC
Q psy7057          57 WDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-II-VTGCADKTIKLHSEEG----EFLK-TLTGHTDCVRGLAVLN  129 (557)
Q Consensus        57 ~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l-~sgs~dg~I~vwd~~~----~~~~-~l~~h~~~V~~l~~~~  129 (557)
                      ....|+..++.+.+....+. ....+..++|.+.+ .| ++-...+.|+.++..+    .... .+.........|++.+
T Consensus       384 ~~~~I~~id~~~~~~~~~~~-~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~  462 (699)
T 1n7d_A          384 NRHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDW  462 (699)
T ss_dssp             CTTC-CEECTTSCCEECCSC-CCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCC
T ss_pred             CccceEEEeCCCCcceeeec-cCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEe
Confidence            34577888877665443333 23345678888744 44 4444567888888654    1111 1111122345677764


Q ss_pred             C-Ce-EEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEEc--CC-EEEEEeCC-CeEEEEECCCC--ceEe-eCCccE
Q psy7057         130 D-TD-FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAH--GD-LITSGGED-QCVCVYQNKAQ--NSFM-IPAMSV  200 (557)
Q Consensus       130 ~-~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~~--~~-~l~s~s~D-g~I~iwd~~~~--~~~~-~~~~~v  200 (557)
                      . +. +++-...+.|.+.++........+.........|+++  +. ++++-... +.|..+++...  ..+. ..-...
T Consensus       463 ~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~P  542 (699)
T 1n7d_A          463 IHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWP  542 (699)
T ss_dssp             SSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSC
T ss_pred             eCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCc
Confidence            3 44 4455567889999976544333222222344566663  33 34433222 67777775433  2221 122345


Q ss_pred             EEEEEcCCCc-E-EEEEcCCcEEEEecCCC
Q psy7057         201 WAVAILPNSD-I-VTGSSDGIVRVFSANPD  228 (557)
Q Consensus       201 ~~v~~~p~g~-l-~sg~~Dg~I~iwd~~~~  228 (557)
                      ..|++.|++. | ++-+..+.|.+++++..
T Consensus       543 nGlavd~~~~~LY~aD~~~~~I~~~d~dG~  572 (699)
T 1n7d_A          543 NGITLDLLSGRLYWVDSKLHSISSIDVNGG  572 (699)
T ss_dssp             CCEEECTTTCCEEEEETTTTEEEEECSSSS
T ss_pred             cEEEEeccCCEEEEEecCCCeEEEEccCCC
Confidence            6899998765 4 45556778999998753

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=93.31  E-value=0.076  Score=58.70  Aligned_cols=176  Identities=14%  Similarity=0.011  Sum_probs=100.0

Q ss_pred             cEEEEEEcCCC-cEEEE-ECCCcEEEEcCCC--------------------CCCCCCC-CEEEEEECCCeEEEEECCCCe
Q psy7057          14 DVRSLSVTPDG-CILSA-SRDKSAKLWKPND--------------------LSPGAKV-NTLLSASWDMTAKLWCLESQQ   70 (557)
Q Consensus        14 ~V~~l~~spdg-~l~sg-s~Dg~V~iWd~~~--------------------~~~~~~~-~~l~sgs~Dg~i~iwd~~~~~   70 (557)
                      .+..|+|.+.+ .|+.+ ...+.|+.+++..                    ++++..+ .++++-...+.|.++++....
T Consensus       407 ~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~  486 (699)
T 1n7d_A          407 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK  486 (699)
T ss_dssp             TCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCC
T ss_pred             ceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCc
Confidence            45678888754 45433 4557788877652                    2222222 333333456778888876544


Q ss_pred             EEEEEcccCCcEEEEEEcCC-CEEEEEEC-C-CeEEEEeCCCcEEEEEe-CCCCCEEEEEEeCC-CeE-EEEECCCeEEE
Q psy7057          71 CKLTIRQHEMAVWGVIQLAN-GIIVTGCA-D-KTIKLHSEEGEFLKTLT-GHTDCVRGLAVLND-TDF-VSCSNDASIRV  144 (557)
Q Consensus        71 ~~~~l~~h~~~V~~l~~~~~-~~l~sgs~-d-g~I~vwd~~~~~~~~l~-~h~~~V~~l~~~~~-~~l-vs~s~Dg~I~v  144 (557)
                      ....+.........|++.|. +.|+.... . +.|.+.++.+.....+. ..-.....|+++++ +.| ++-+..+.|..
T Consensus       487 ~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~  566 (699)
T 1n7d_A          487 RKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISS  566 (699)
T ss_dssp             EEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEE
T ss_pred             eEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEE
Confidence            33333322344567888885 44443332 2 67888777665544442 22345678999986 444 45566788999


Q ss_pred             EECCCCeEEEEEeC---CCCcEEEEEEcCCE-EEEEeCCCeEEEEECCCC
Q psy7057         145 WDSTTGKCVHTMYG---HPNFIYSVAAHGDL-ITSGGEDQCVCVYQNKAQ  190 (557)
Q Consensus       145 wd~~~~~~~~~~~~---h~~~V~~l~~~~~~-l~s~s~Dg~I~iwd~~~~  190 (557)
                      +++.... ...+..   .-.....|+++++. +++....+.|..++..+.
T Consensus       567 ~d~dG~~-~~~~~~~~~~~~~P~glavd~~~lywtd~~~~~V~~~d~~~G  615 (699)
T 1n7d_A          567 IDVNGGN-RKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTG  615 (699)
T ss_dssp             ECSSSSC-CEEECCCSSSCSSCCCCEEETTEEEEECSTTTCEEEEETTTE
T ss_pred             EccCCCc-eEEEEecCCcCCCceEeEEECCEEEEEeCCCCeEEEEEccCC
Confidence            9986432 233321   12233456665554 445556678888886544

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=92.88  E-value=12  Score=40.30  Aligned_cols=174  Identities=7%  Similarity=-0.076  Sum_probs=99.3

Q ss_pred             ECCCeEEEEECCCCe-EEEEEcccCCcEEEEEEcCC-CEEE-EEECCCeEEEEeCCCcE--EEEEeCCCCCEEEEEEeCC
Q psy7057          56 SWDMTAKLWCLESQQ-CKLTIRQHEMAVWGVIQLAN-GIIV-TGCADKTIKLHSEEGEF--LKTLTGHTDCVRGLAVLND  130 (557)
Q Consensus        56 s~Dg~i~iwd~~~~~-~~~~l~~h~~~V~~l~~~~~-~~l~-sgs~dg~I~vwd~~~~~--~~~l~~h~~~V~~l~~~~~  130 (557)
                      .....|+..++.... ....+...-..+..++|.+. +.|. +-...+.|..++.++..  ...+...-.....|++.+.
T Consensus        15 ~~~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~   94 (619)
T 3s94_A           15 ANRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWL   94 (619)
T ss_dssp             ECSSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETT
T ss_pred             eccccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEec
Confidence            445678888887543 22223334456778999984 4444 44456788888876652  2233333357899999974


Q ss_pred             -CeEE-EEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEEcC--CEEEEEeC--CCeEEEEECCCC--ceEe-eCCccEE
Q psy7057         131 -TDFV-SCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHG--DLITSGGE--DQCVCVYQNKAQ--NSFM-IPAMSVW  201 (557)
Q Consensus       131 -~~lv-s~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~~~--~~l~s~s~--Dg~I~iwd~~~~--~~~~-~~~~~v~  201 (557)
                       +.++ +-...+.|.+.++........+...-.....|++++  ..|+....  .+.|...++...  ..+. ..-....
T Consensus        95 ~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~  174 (619)
T 3s94_A           95 GEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPN  174 (619)
T ss_dssp             TTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEE
T ss_pred             CCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCc
Confidence             5544 666778999999764433222223344566777743  34444432  456666665433  2232 2334678


Q ss_pred             EEEEcCCCc-EE-EEEcCCcEEEEecCCCC
Q psy7057         202 AVAILPNSD-IV-TGSSDGIVRVFSANPDR  229 (557)
Q Consensus       202 ~v~~~p~g~-l~-sg~~Dg~I~iwd~~~~~  229 (557)
                      .+++.+++. |. +=...+.|..++++...
T Consensus       175 Glald~~~~~LY~aD~~~~~I~~~~~dG~~  204 (619)
T 3s94_A          175 GLTLDYEEQKLYWADAKLNFIHKSNLDGTN  204 (619)
T ss_dssp             EEEEETTTTEEEEEETTTCCEEEESSSCCE
T ss_pred             EEEEEccCCEEEEEeCCCCeEEEecCCCCc
Confidence            999998655 44 44456788888887643

>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*

Probab=92.60  E-value=2.4  Score=39.32  Aligned_cols=125  Identities=8%  Similarity=-0.071  Sum_probs=76.2

Q ss_pred             ccEEEEEEcCCCcEEEEECCCcEEEEcCCC-----------------------CCCCCCCCEEEEEECCCeEEEEECCCC
Q psy7057          13 MDVRSLSVTPDGCILSASRDKSAKLWKPND-----------------------LSPGAKVNTLLSASWDMTAKLWCLESQ   69 (557)
Q Consensus        13 ~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~-----------------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~   69 (557)
                      ..+++++|+|+|.|.+. .+|.+.--+..+                       +.+++++.+.++  .||.|.-++..+.
T Consensus        41 ~~~~~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~  117 (236)
T 1tl2_A           41 SNFKFLFLSPGGELYGV-LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQS  117 (236)
T ss_dssp             TTCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCS
T ss_pred             ccceeEEECCCccEEEE-eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcC
Confidence            36779999999997777 778776666533                       455677777777  5688877775332


Q ss_pred             eE-------EEEEcccCCcEEEEEEcCCCEEEEEECCCeEEEEeCC-Cc------EEEEEe-CCCCCEEEEEEeCCCeEE
Q psy7057          70 QC-------KLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEE-GE------FLKTLT-GHTDCVRGLAVLNDTDFV  134 (557)
Q Consensus        70 ~~-------~~~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~~-~~------~~~~l~-~h~~~V~~l~~~~~~~lv  134 (557)
                      ..       ...-..-=..+.+|.+.|+|.|.... |+.+.-+... +.      ....+- .....-+.+.+.+++.|.
T Consensus       118 ~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~-dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~  196 (236)
T 1tl2_A          118 DTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH-GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTLF  196 (236)
T ss_dssp             TTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE-TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCEE
T ss_pred             CCCceeccccEeccCCCCceEEEEECCCceEEEEe-CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCcEE
Confidence            10       11111122567899999999777777 8886544311 11      011111 233344556678888776


Q ss_pred             EEECCCeE
Q psy7057         135 SCSNDASI  142 (557)
Q Consensus       135 s~s~Dg~I  142 (557)
                      ..+ ++.+
T Consensus       197 ~v~-~g~~  203 (236)
T 1tl2_A          197 GVQ-GGKF  203 (236)
T ss_dssp             EEE-TTEE
T ss_pred             EEe-CCeE
Confidence            666 6643

>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1

Probab=91.91  E-value=12  Score=38.22  Aligned_cols=239  Identities=10%  Similarity=0.070  Sum_probs=151.7

Q ss_pred             CcEEEEcCCC-------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCCEEEEEECC
Q psy7057          33 KSAKLWKPND-------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCAD   99 (557)
Q Consensus        33 g~V~iWd~~~-------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~~l~sgs~d   99 (557)
                      ..|.|-|+.+             .-.+|..+.|+--. ..++.|+|+++.+.+..+.-.+ .|.--.|..+..|+.. .+
T Consensus        48 ~~vvIiDl~~~~~~~rrpi~AdsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e-~VvfWkWis~~~l~lV-T~  124 (494)
T 1bpo_A           48 AQVVIIDMNDPSNPIRRPISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISLNTVALV-TD  124 (494)
T ss_dssp             CEEEEEETTSTTSCEEEECCCSEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSS-CCCEEEEEETTEEEEE-CS
T ss_pred             CeEEEEECCCCCcceecccccceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCC-CceEEEecCCCeEEEE-cC
Confidence            3677777765             11234455555554 7899999999988888776444 5556677766644433 35


Q ss_pred             CeEEEEeCCC--cEEEEEeCCC----CCEEEEEEeCCCe-EE-EEE------CCCeEEEEECCCCeEEEEEeCCCCcEEE
Q psy7057         100 KTIKLHSEEG--EFLKTLTGHT----DCVRGLAVLNDTD-FV-SCS------NDASIRVWDSTTGKCVHTMYGHPNFIYS  165 (557)
Q Consensus       100 g~I~vwd~~~--~~~~~l~~h~----~~V~~l~~~~~~~-lv-s~s------~Dg~I~vwd~~~~~~~~~~~~h~~~V~~  165 (557)
                      ..|.-|+..+  .+.+.+..|.    ..|..-..+++.+ ++ +|-      -.|.+.+|... .+..+.+.+|.+....
T Consensus       125 taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~e-r~~sQ~ieGhaa~F~~  203 (494)
T 1bpo_A          125 NAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVD-RKVSQPIEGHAASFAQ  203 (494)
T ss_dssp             SEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEEST-TCCEEEECCSEEEEEE
T ss_pred             CeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecc-ccccchheeeeeeeEE
Confidence            6899999643  5677776654    3566666677766 22 222      23678899965 4556778888877766


Q ss_pred             EEEcCC----EEEE-EeC---CCeEEEEECCCC----c-----eEe------eCCccEEEEEEcCCCc-EEEEEcCCcEE
Q psy7057         166 VAAHGD----LITS-GGE---DQCVCVYQNKAQ----N-----SFM------IPAMSVWAVAILPNSD-IVTGSSDGIVR  221 (557)
Q Consensus       166 l~~~~~----~l~s-~s~---Dg~I~iwd~~~~----~-----~~~------~~~~~v~~v~~~p~g~-l~sg~~Dg~I~  221 (557)
                      +..+|+    .|++ +..   .+.+++-++...    .     ...      ...+...++.+++... +..-+.-|.|+
T Consensus       204 ~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~  283 (494)
T 1bpo_A          204 FKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIH  283 (494)
T ss_dssp             EECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEE
T ss_pred             EecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEE
Confidence            666443    2333 322   278899886432    1     111      1134566777887766 77888999999


Q ss_pred             EEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCChhhHH
Q psy7057         222 VFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQAED  278 (557)
Q Consensus       222 iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~~~~~~  278 (557)
                      +||+.++.......   .......+........++++....|.|.--.+++....+-
T Consensus       284 lyDleTgt~i~~nr---Is~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~~ivpy  337 (494)
T 1bpo_A          284 LYDLETGTCIYMNR---ISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPY  337 (494)
T ss_dssp             EEETTTCCEEEEEE---CCSSCEEEEEEETTTTEEEEEETTCEEEEEEECTTTHHHH
T ss_pred             EEecccceeeeeec---ccCCceEEecccCCCCcEEEEccCceEEEEEEccccchhh
Confidence            99999987653222   1122222333333444678888999999999998876553

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}

Probab=91.42  E-value=6.5  Score=37.54  Aligned_cols=166  Identities=16%  Similarity=0.229  Sum_probs=77.6

Q ss_pred             eEEEEECCCCeEEEE--EcccCCcEEEEEEcCCCEEEEEECC-----CeEEEEeCCCcEEEEEeC---CCCCEEEEEEeC
Q psy7057          60 TAKLWCLESQQCKLT--IRQHEMAVWGVIQLANGIIVTGCAD-----KTIKLHSEEGEFLKTLTG---HTDCVRGLAVLN  129 (557)
Q Consensus        60 ~i~iwd~~~~~~~~~--l~~h~~~V~~l~~~~~~~l~sgs~d-----g~I~vwd~~~~~~~~l~~---h~~~V~~l~~~~  129 (557)
                      .+..||+.+.+-...  +......- +++...+.+++.|+.+     ..+.+||.....-..+..   .... .+++.. 
T Consensus        31 ~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~~-  107 (302)
T 2xn4_A           31 SVECYDFKEERWHQVAELPSRRCRA-GMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRST-LGAAVL-  107 (302)
T ss_dssp             CEEEEETTTTEEEEECCCSSCCBSC-EEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBS-CEEEEE-
T ss_pred             cEEEEcCcCCcEeEcccCCcccccc-eEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccc-eEEEEE-
Confidence            466777776542211  11111111 2222333366666654     347778854443333321   1111 122223 


Q ss_pred             CCe-EEEEECCC-----eEEEEECCCCeEEEE--EeCCCCcEEEEEEcCCEEEEEeCC-------CeEEEEECCCC--ce
Q psy7057         130 DTD-FVSCSNDA-----SIRVWDSTTGKCVHT--MYGHPNFIYSVAAHGDLITSGGED-------QCVCVYQNKAQ--NS  192 (557)
Q Consensus       130 ~~~-lvs~s~Dg-----~I~vwd~~~~~~~~~--~~~h~~~V~~l~~~~~~l~s~s~D-------g~I~iwd~~~~--~~  192 (557)
                      ++. ++.|+.++     .+.+||+.+.+-...  +........++..++.+++.|+.+       ..+.+||..+.  ..
T Consensus       108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~  187 (302)
T 2xn4_A          108 NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTY  187 (302)
T ss_dssp             TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEE
T ss_pred             CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEE
Confidence            344 55666543     477888876653322  111111222333466666666542       35888997665  22


Q ss_pred             EeeCCcc--EEEEEEcCCCc-EEEEEcC-----CcEEEEecCCCC
Q psy7057         193 FMIPAMS--VWAVAILPNSD-IVTGSSD-----GIVRVFSANPDR  229 (557)
Q Consensus       193 ~~~~~~~--v~~v~~~p~g~-l~sg~~D-----g~I~iwd~~~~~  229 (557)
                      +.....+  -.+++.. ++. ++.|+.+     ..+.+||..+..
T Consensus       188 ~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~  231 (302)
T 2xn4_A          188 IAEMSTRRSGAGVGVL-NNLLYAVGGHDGPLVRKSVEVYDPTTNA  231 (302)
T ss_dssp             ECCCSSCCBSCEEEEE-TTEEEEECCBSSSSBCCCEEEEETTTTE
T ss_pred             CCCCccccccccEEEE-CCEEEEECCCCCCcccceEEEEeCCCCC
Confidence            2211111  1122222 455 5666654     368888877643

>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*

Probab=91.30  E-value=13  Score=37.07  Aligned_cols=132  Identities=15%  Similarity=0.211  Sum_probs=76.3

Q ss_pred             EEEEEEcCCCcEEEEE-------------CCCcEEEEcCCC-------CC-----C-----CC---------CCC-EEEE
Q psy7057          15 VRSLSVTPDGCILSAS-------------RDKSAKLWKPND-------LS-----P-----GA---------KVN-TLLS   54 (557)
Q Consensus        15 V~~l~~spdg~l~sgs-------------~Dg~V~iWd~~~-------~~-----~-----~~---------~~~-~l~s   54 (557)
                      .-+++..|+|.+++++             .+|.|.++|+.+       +.     +     .|         ++. +|+.
T Consensus        52 ~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~V  131 (355)
T 3sre_A           52 SEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLV  131 (355)
T ss_dssp             CCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEE
T ss_pred             cceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEE
Confidence            4456678988866665             689999999873       11     1     11         122 3333


Q ss_pred             EE-C--CCeEEEEECCCC--e--EEEEEccc-CCcEEEEEEcCCCEEEEEEC------------------CCeEEEEeCC
Q psy7057          55 AS-W--DMTAKLWCLESQ--Q--CKLTIRQH-EMAVWGVIQLANGIIVTGCA------------------DKTIKLHSEE  108 (557)
Q Consensus        55 gs-~--Dg~i~iwd~~~~--~--~~~~l~~h-~~~V~~l~~~~~~~l~sgs~------------------dg~I~vwd~~  108 (557)
                      +. .  +.++.+|++...  .  .+.++.+. -...+.+++.++|.+..++.                  .+.+..++. 
T Consensus       132 vnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~-  210 (355)
T 3sre_A          132 VNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP-  210 (355)
T ss_dssp             EECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT-
T ss_pred             EECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC-
Confidence            32 2  456667665442  2  23334332 34678888888885444432                  234544543 


Q ss_pred             CcEEEEEeCCCCCEEEEEEeCCCe--EEEEECCCeEEEEECC
Q psy7057         109 GEFLKTLTGHTDCVRGLAVLNDTD--FVSCSNDASIRVWDST  148 (557)
Q Consensus       109 ~~~~~~l~~h~~~V~~l~~~~~~~--lvs~s~Dg~I~vwd~~  148 (557)
                      ++ +..+...-...+.++|+|+++  +++-+..+.|..|++.
T Consensus       211 ~~-~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~  251 (355)
T 3sre_A          211 ND-VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKH  251 (355)
T ss_dssp             TC-CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred             Ce-EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEEC
Confidence            22 222322334578999999985  3455667889999875

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}

Probab=91.08  E-value=10  Score=36.20  Aligned_cols=166  Identities=11%  Similarity=0.131  Sum_probs=79.1

Q ss_pred             CeEEEEECCCCeEEE--EEcccCCcEEEEEEcCCCEEEEEECC----CeEEEEeCCCcEEEEEeC---CCCCEEEEEEeC
Q psy7057          59 MTAKLWCLESQQCKL--TIRQHEMAVWGVIQLANGIIVTGCAD----KTIKLHSEEGEFLKTLTG---HTDCVRGLAVLN  129 (557)
Q Consensus        59 g~i~iwd~~~~~~~~--~l~~h~~~V~~l~~~~~~~l~sgs~d----g~I~vwd~~~~~~~~l~~---h~~~V~~l~~~~  129 (557)
                      ..+.+||+.+.+-..  .+....... +++...+.+++.|+.+    ..+.++|.....-..+..   ..... +++.. 
T Consensus        24 ~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~-  100 (306)
T 3ii7_A           24 QSCRYFNPKDYSWTDIRCPFEKRRDA-ACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSL-AACAA-  100 (306)
T ss_dssp             TSEEEEETTTTEEEECCCCSCCCBSC-EEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSC-EEEEE-
T ss_pred             ceEEEecCCCCCEecCCCCCccccee-EEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccce-eEEEE-
Confidence            457777877654221  111111111 2222233366667654    567778854433222221   11112 22223 


Q ss_pred             CCe-EEEEECC------CeEEEEECCCCeEEEE--EeCCCCcEEEEEEcCCEEEEEeC---------CCeEEEEECCCC-
Q psy7057         130 DTD-FVSCSND------ASIRVWDSTTGKCVHT--MYGHPNFIYSVAAHGDLITSGGE---------DQCVCVYQNKAQ-  190 (557)
Q Consensus       130 ~~~-lvs~s~D------g~I~vwd~~~~~~~~~--~~~h~~~V~~l~~~~~~l~s~s~---------Dg~I~iwd~~~~-  190 (557)
                      ++. ++.|+.+      ..+.+||+.+.+-...  +......-.++..++.+++.|+.         -..+.+||..+. 
T Consensus       101 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~  180 (306)
T 3ii7_A          101 EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATET  180 (306)
T ss_dssp             TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTE
T ss_pred             CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCe
Confidence            455 5566654      4588899887653322  11111122233346666666653         345888997665 


Q ss_pred             -ceEeeCCcc--EEEEEEcCCCc-EEEEEcC-----CcEEEEecCCC
Q psy7057         191 -NSFMIPAMS--VWAVAILPNSD-IVTGSSD-----GIVRVFSANPD  228 (557)
Q Consensus       191 -~~~~~~~~~--v~~v~~~p~g~-l~sg~~D-----g~I~iwd~~~~  228 (557)
                       ..+.....+  -.+++.. +++ ++.|+.+     ..+.+||..+.
T Consensus       181 W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~~  226 (306)
T 3ii7_A          181 WTELCPMIEARKNHGLVFV-KDKIFAVGGQNGLGGLDNVEYYDIKLN  226 (306)
T ss_dssp             EEEECCCSSCCBSCEEEEE-TTEEEEECCEETTEEBCCEEEEETTTT
T ss_pred             EEECCCccchhhcceEEEE-CCEEEEEeCCCCCCCCceEEEeeCCCC
Confidence             333211111  1122222 555 5566543     45788887765

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}

Probab=91.07  E-value=7.4  Score=37.05  Aligned_cols=166  Identities=20%  Similarity=0.216  Sum_probs=78.1

Q ss_pred             eEEEEECCCCeEEE--EEcccCCcEEEEEEcCCCEEEEEECC-----CeEEEEeCCCcE---EEEE---eCCCCCEEEEE
Q psy7057          60 TAKLWCLESQQCKL--TIRQHEMAVWGVIQLANGIIVTGCAD-----KTIKLHSEEGEF---LKTL---TGHTDCVRGLA  126 (557)
Q Consensus        60 ~i~iwd~~~~~~~~--~l~~h~~~V~~l~~~~~~~l~sgs~d-----g~I~vwd~~~~~---~~~l---~~h~~~V~~l~  126 (557)
                      .+.+||+.+.+-..  .+....... +++...+.+++.|+.+     ..+.+||.....   -..+   ........ ++
T Consensus        32 ~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~-~~  109 (301)
T 2vpj_A           32 VVEKYDPKTQEWSFLPSITRKRRYV-ASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAG-AT  109 (301)
T ss_dssp             CEEEEETTTTEEEECCCCSSCCBSC-EEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCE-EE
T ss_pred             EEEEEcCCCCeEEeCCCCChhhccc-cEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCcccee-EE
Confidence            56777776654221  111111111 2222333366666654     357788843222   1222   11111122 22


Q ss_pred             EeCCCe-EEEEECC-----CeEEEEECCCCeEE--EEEeCCCCcEEEEEEcCCEEEEEeCC-----CeEEEEECCCC--c
Q psy7057         127 VLNDTD-FVSCSND-----ASIRVWDSTTGKCV--HTMYGHPNFIYSVAAHGDLITSGGED-----QCVCVYQNKAQ--N  191 (557)
Q Consensus       127 ~~~~~~-lvs~s~D-----g~I~vwd~~~~~~~--~~~~~h~~~V~~l~~~~~~l~s~s~D-----g~I~iwd~~~~--~  191 (557)
                      .. ++. ++.|+.+     ..+.++|+.+.+-.  ..+......-.++..++.+++.|+.+     ..+.+||..+.  .
T Consensus       110 ~~-~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~  188 (301)
T 2vpj_A          110 TL-GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWT  188 (301)
T ss_dssp             EE-TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEE
T ss_pred             EE-CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEE
Confidence            22 455 4555543     35888998776532  22221112222333467777777654     45888997665  3


Q ss_pred             eEeeCCcc-E-EEEEEcCCCc-EEEEEcC-----CcEEEEecCCCC
Q psy7057         192 SFMIPAMS-V-WAVAILPNSD-IVTGSSD-----GIVRVFSANPDR  229 (557)
Q Consensus       192 ~~~~~~~~-v-~~v~~~p~g~-l~sg~~D-----g~I~iwd~~~~~  229 (557)
                      .+.....+ . .+++.. ++. ++.|+.+     ..+.+||..+..
T Consensus       189 ~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~  233 (301)
T 2vpj_A          189 NVTPMATKRSGAGVALL-NDHIYVVGGFDGTAHLSSVEAYNIRTDS  233 (301)
T ss_dssp             EECCCSSCCBSCEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred             eCCCCCcccccceEEEE-CCEEEEEeCCCCCcccceEEEEeCCCCc
Confidence            32211111 1 122222 455 5666654     468888887653

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=90.02  E-value=18  Score=36.83  Aligned_cols=125  Identities=14%  Similarity=0.058  Sum_probs=82.6

Q ss_pred             CCeEEEEeCC-CcEEEEEeCC----CCCEEEEEEeCCCeEEEEECCCeEEEEECCCCe------------EEEEEeC---
Q psy7057          99 DKTIKLHSEE-GEFLKTLTGH----TDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGK------------CVHTMYG---  158 (557)
Q Consensus        99 dg~I~vwd~~-~~~~~~l~~h----~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~------------~~~~~~~---  158 (557)
                      ++.||.-+.. ...-+.+...    -..|..+..+|+|.+++-..+..|.|-.+..+.            ..+.+.-   
T Consensus        40 ~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~  119 (452)
T 3pbp_A           40 DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEE  119 (452)
T ss_dssp             TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGC
T ss_pred             CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCCeEEEEEecCccccCcccccccccceeEEEcCCc
Confidence            4667766633 3233334322    235788999999999988888999998876321            1233332   


Q ss_pred             ---CCCcEEEEEE-----cCCEEEEEeCCCeEEEEECCCC----ceEee---------CCccEEEEEEcCCCc-EEEEE-
Q psy7057         159 ---HPNFIYSVAA-----HGDLITSGGEDQCVCVYQNKAQ----NSFMI---------PAMSVWAVAILPNSD-IVTGS-  215 (557)
Q Consensus       159 ---h~~~V~~l~~-----~~~~l~s~s~Dg~I~iwd~~~~----~~~~~---------~~~~v~~v~~~p~g~-l~sg~-  215 (557)
                         ....|..+.|     ++..|++-..|++||+||+...    ..+..         ....|.+++|.+++- |...+ 
T Consensus       120 ~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~  199 (452)
T 3pbp_A          120 EVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNT  199 (452)
T ss_dssp             C--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTSSCEEEEEC
T ss_pred             ccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCCcEEEEEec
Confidence               2567999999     4568999999999999996642    11211         114678899998765 55544 


Q ss_pred             -cCCcEEEE
Q psy7057         216 -SDGIVRVF  223 (557)
Q Consensus       216 -~Dg~I~iw  223 (557)
                       +.|.|+-.
T Consensus       200 t~~GDIYAl  208 (452)
T 3pbp_A          200 TEGGDIFAF  208 (452)
T ss_dssp             TTSCEEEEE
T ss_pred             CCCCCEEEE
Confidence             67776654

>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A

Probab=90.01  E-value=16  Score=43.04  Aligned_cols=239  Identities=11%  Similarity=0.067  Sum_probs=140.8

Q ss_pred             CCcEEEEcCCC-------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCCEEEEEEC
Q psy7057          32 DKSAKLWKPND-------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCA   98 (557)
Q Consensus        32 Dg~V~iWd~~~-------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~~l~sgs~   98 (557)
                      ..+|.|-|+.+             .-.+|..+.|+.- ...++.|+|+++...+.++.- ...|.--.|.....|+..+ 
T Consensus        47 ~~~vvIidl~~~~~~~rrpi~AdsAIMnP~~~iiALr-ag~~lQiFnl~~k~klks~~~-~e~VvfWkWis~~~l~lVT-  123 (1630)
T 1xi4_A           47 QAQVVIIDMNDPSNPIRRPISADSAIMNPASKVIALK-AGKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLNTVALVT-  123 (1630)
T ss_pred             CceEEEEECCCCCCcccccccchhhccCCCcceEEEe-cCCeEEEeehHHhhhhccccc-CCCceEEEecCCCeeEEEc-
Confidence            34677777765             1223445555544 478999999998777666654 3456667777766443332 


Q ss_pred             CCeEEEEeCCC--cEEEEEeCC----CCCEEEEEEeCCCe-EE-EE------ECCCeEEEEECCCCeEEEEEeCCCCcEE
Q psy7057          99 DKTIKLHSEEG--EFLKTLTGH----TDCVRGLAVLNDTD-FV-SC------SNDASIRVWDSTTGKCVHTMYGHPNFIY  164 (557)
Q Consensus        99 dg~I~vwd~~~--~~~~~l~~h----~~~V~~l~~~~~~~-lv-s~------s~Dg~I~vwd~~~~~~~~~~~~h~~~V~  164 (557)
                      +..|..|+..+  .+.+.+..|    ...|..-..+++.+ ++ +|      .-.|.+.+|... .+..+.+.||.+...
T Consensus       124 ~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~e-r~~sQ~iegha~~F~  202 (1630)
T 1xi4_A          124 DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVD-RKVSQPIEGHAASFA  202 (1630)
T ss_pred             CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecc-cccchhhhHhHhhhh
Confidence            46799999644  455555444    34566666667666 22 32      234788899864 344455667766554


Q ss_pred             EEEEcC----CEEEEEeC----CCeEEEEECCCC----ceE-------ee----CCccEEEEEEcCCCc-EEEEEcCCcE
Q psy7057         165 SVAAHG----DLITSGGE----DQCVCVYQNKAQ----NSF-------MI----PAMSVWAVAILPNSD-IVTGSSDGIV  220 (557)
Q Consensus       165 ~l~~~~----~~l~s~s~----Dg~I~iwd~~~~----~~~-------~~----~~~~v~~v~~~p~g~-l~sg~~Dg~I  220 (557)
                      .+..+|    ..|++-..    .+.++|-++...    ..+       ..    ..+...++.+++... +..-+.-|.|
T Consensus       203 ~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~  282 (1630)
T 1xi4_A          203 QFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYI  282 (1630)
T ss_pred             eeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceE
Confidence            444422    12333222    268888886432    111       11    123345666666655 6678889999


Q ss_pred             EEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCChhhH
Q psy7057         221 RVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQAE  277 (557)
Q Consensus       221 ~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~~~~~  277 (557)
                      .++|+.++.......   .......+........++++....|.|.--.+++....+
T Consensus       283 ~~~d~~t~~~i~~~r---is~~~iF~~~~~~~~~g~~~vnr~G~vl~v~v~~~~iv~  336 (1630)
T 1xi4_A          283 HLYDLETGTCIYMNR---ISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIP  336 (1630)
T ss_pred             EEEecccchhhhhcc---ccCCceEEeccCCCCCceEEEcCCceEEEEEEccchhhh
Confidence            999999886643222   222222333333344566777788888888887765543

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}

Probab=89.91  E-value=5.3  Score=38.16  Aligned_cols=177  Identities=16%  Similarity=0.162  Sum_probs=83.3

Q ss_pred             CCEEEEEECC-----CeEEEEECCCCeEEEE--EcccCCcEEEEEEcCCCEEEEEECCC-----eEEEEeCCCcEEEEEe
Q psy7057          49 VNTLLSASWD-----MTAKLWCLESQQCKLT--IRQHEMAVWGVIQLANGIIVTGCADK-----TIKLHSEEGEFLKTLT  116 (557)
Q Consensus        49 ~~~l~sgs~D-----g~i~iwd~~~~~~~~~--l~~h~~~V~~l~~~~~~~l~sgs~dg-----~I~vwd~~~~~~~~l~  116 (557)
                      +..++.|+.+     ..+.+||+.+.+-...  +....... +++...+.+++.|+.++     .+.+||.....-..+.
T Consensus        62 ~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~  140 (302)
T 2xn4_A           62 GLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTL-GAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVA  140 (302)
T ss_dssp             TEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSC-EEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEEC
T ss_pred             CEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccce-EEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecC
Confidence            3445555543     3577888877642221  11111111 22222333666676553     4667775444333332


Q ss_pred             CCC--CCEEEEEEeCCCe-EEEEEC-------CCeEEEEECCCCeEEEE--EeCCCCcEEEEEEcCCEEEEEeCC-----
Q psy7057         117 GHT--DCVRGLAVLNDTD-FVSCSN-------DASIRVWDSTTGKCVHT--MYGHPNFIYSVAAHGDLITSGGED-----  179 (557)
Q Consensus       117 ~h~--~~V~~l~~~~~~~-lvs~s~-------Dg~I~vwd~~~~~~~~~--~~~h~~~V~~l~~~~~~l~s~s~D-----  179 (557)
                      ...  ..-.+++.. ++. ++.|+.       -..+.+||+.+.+-...  +........++..++.+++.|+.+     
T Consensus       141 ~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~  219 (302)
T 2xn4_A          141 PMNTRRSSVGVGVV-GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVR  219 (302)
T ss_dssp             CCSSCCBSCEEEEE-TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBSSSSBC
T ss_pred             CCCCcccCceEEEE-CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEECCEEEEECCCCCCccc
Confidence            111  111122333 445 445543       23588899877653322  211111223334467777777654     


Q ss_pred             CeEEEEECCCC--ceEeeCCcc-E-EEEEEcCCCc-EEEEEcCC-----cEEEEecCCC
Q psy7057         180 QCVCVYQNKAQ--NSFMIPAMS-V-WAVAILPNSD-IVTGSSDG-----IVRVFSANPD  228 (557)
Q Consensus       180 g~I~iwd~~~~--~~~~~~~~~-v-~~v~~~p~g~-l~sg~~Dg-----~I~iwd~~~~  228 (557)
                      ..+.+||..+.  ..+...... . .+++.. ++. ++.|+.++     .+.+||..+.
T Consensus       220 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~  277 (302)
T 2xn4_A          220 KSVEVYDPTTNAWRQVADMNMCRRNAGVCAV-NGLLYVVGGDDGSCNLASVEYYNPTTD  277 (302)
T ss_dssp             CCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred             ceEEEEeCCCCCEeeCCCCCCccccCeEEEE-CCEEEEECCcCCCcccccEEEEcCCCC
Confidence            36889997665  333211111 1 112222 555 56666543     4777777654

>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}

Probab=89.32  E-value=18  Score=35.69  Aligned_cols=71  Identities=15%  Similarity=0.156  Sum_probs=47.1

Q ss_pred             CCcEEEEEEcCCCEEEEEECCCeEEEEeCCCcEE--EEEe---CCCCCEEEEEEeCC----CeEE-EEECC-----CeEE
Q psy7057          79 EMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFL--KTLT---GHTDCVRGLAVLND----TDFV-SCSND-----ASIR  143 (557)
Q Consensus        79 ~~~V~~l~~~~~~~l~sgs~dg~I~vwd~~~~~~--~~l~---~h~~~V~~l~~~~~----~~lv-s~s~D-----g~I~  143 (557)
                      -...+.++|.|+|.++.+..++.|.+++ .+...  ..+.   ........|+++|+    +.+. +-+..     ..|.
T Consensus        30 l~~P~~ia~~pdG~l~V~e~~g~I~~i~-~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~  108 (352)
T 2ism_A           30 LEVPWALAFLPDGGMLIAERPGRIRLFR-EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV  108 (352)
T ss_dssp             CSCEEEEEECTTSCEEEEETTTEEEEEE-TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred             CCCceEEEEcCCCeEEEEeCCCeEEEEE-CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence            4467799999999777777889999998 55422  1111   12356899999998    5544 43322     5677


Q ss_pred             EEECCCC
Q psy7057         144 VWDSTTG  150 (557)
Q Consensus       144 vwd~~~~  150 (557)
                      .++...+
T Consensus       109 r~~~~~~  115 (352)
T 2ism_A          109 RLRHLGE  115 (352)
T ss_dssp             EEEECSS
T ss_pred             EEEeCCC
Confidence            7876643

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}

Probab=89.17  E-value=12  Score=35.70  Aligned_cols=199  Identities=14%  Similarity=0.133  Sum_probs=95.3

Q ss_pred             EEEEEC--CCcEEEEcCCC-----CCCC-----------CCCCEEEEEECC----CeEEEEECCCCeEEEE--EcccCCc
Q psy7057          26 ILSASR--DKSAKLWKPND-----LSPG-----------AKVNTLLSASWD----MTAKLWCLESQQCKLT--IRQHEMA   81 (557)
Q Consensus        26 l~sgs~--Dg~V~iWd~~~-----~~~~-----------~~~~~l~sgs~D----g~i~iwd~~~~~~~~~--l~~h~~~   81 (557)
                      ++.|+.  ...+.+||..+     +...           .++..++.|+.+    ..+.+||+.+.+-...  +......
T Consensus        15 ~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~   94 (306)
T 3ii7_A           15 IALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDS   94 (306)
T ss_dssp             EEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBS
T ss_pred             EEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccc
Confidence            445554  35678888776     1111           123455566544    5678888887643222  2111111


Q ss_pred             EEEEEEcCCCEEEEEECC------CeEEEEeCCCcEEEEEeCC--CCCEEEEEEeCCCe-EEEEEC---------CCeEE
Q psy7057          82 VWGVIQLANGIIVTGCAD------KTIKLHSEEGEFLKTLTGH--TDCVRGLAVLNDTD-FVSCSN---------DASIR  143 (557)
Q Consensus        82 V~~l~~~~~~~l~sgs~d------g~I~vwd~~~~~~~~l~~h--~~~V~~l~~~~~~~-lvs~s~---------Dg~I~  143 (557)
                      . +++...+.+++.|+.+      ..+.+||.....-..+...  ...-.+++.. ++. ++.|+.         -..+.
T Consensus        95 ~-~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~  172 (306)
T 3ii7_A           95 L-AACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA-NGLIYVCGGSLGNNVSGRVLNSCE  172 (306)
T ss_dssp             C-EEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCEESCTTTCEECCCEE
T ss_pred             e-eEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE-CCEEEEECCCCCCCCcccccceEE
Confidence            1 2222233366667655      4577888544433332211  1111122223 445 445542         34588


Q ss_pred             EEECCCCeEEEE--EeCCCCcEEEEEEcCCEEEEEeCC-----CeEEEEECCCC--ceEeeC---CccEEEEEEcCCCc-
Q psy7057         144 VWDSTTGKCVHT--MYGHPNFIYSVAAHGDLITSGGED-----QCVCVYQNKAQ--NSFMIP---AMSVWAVAILPNSD-  210 (557)
Q Consensus       144 vwd~~~~~~~~~--~~~h~~~V~~l~~~~~~l~s~s~D-----g~I~iwd~~~~--~~~~~~---~~~v~~v~~~p~g~-  210 (557)
                      +||+.+.+-...  +......-.++..++.+++.|+.+     ..+.+||..+.  ..+...   .... +++.. ++. 
T Consensus       173 ~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~~~-~~~i  250 (306)
T 3ii7_A          173 VYDPATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTV-KCAAV-GSIV  250 (306)
T ss_dssp             EEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCC-EEEEE-TTEE
T ss_pred             EeCCCCCeEEECCCccchhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccce-eEEEE-CCEE
Confidence            999877643222  111111222333366666666643     45788987665  222111   1111 22222 555 


Q ss_pred             EEEEEcC-----CcEEEEecCCC
Q psy7057         211 IVTGSSD-----GIVRVFSANPD  228 (557)
Q Consensus       211 l~sg~~D-----g~I~iwd~~~~  228 (557)
                      ++.|+.+     ..+.+||..+.
T Consensus       251 ~v~GG~~~~~~~~~~~~yd~~~~  273 (306)
T 3ii7_A          251 YVLAGFQGVGRLGHILEYNTETD  273 (306)
T ss_dssp             EEEECBCSSSBCCEEEEEETTTT
T ss_pred             EEEeCcCCCeeeeeEEEEcCCCC
Confidence            6667744     45777777654

>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1

Probab=89.01  E-value=22  Score=36.40  Aligned_cols=211  Identities=13%  Similarity=0.194  Sum_probs=132.6

Q ss_pred             EcCCCcEEEEECCCcEEEEcCCC---------------CCCCCCCCEEEEEECCCeEEEEECCC-CeEEEEEccc----C
Q psy7057          20 VTPDGCILSASRDKSAKLWKPND---------------LSPGAKVNTLLSASWDMTAKLWCLES-QQCKLTIRQH----E   79 (557)
Q Consensus        20 ~spdg~l~sgs~Dg~V~iWd~~~---------------~~~~~~~~~l~sgs~Dg~i~iwd~~~-~~~~~~l~~h----~   79 (557)
                      .+|..++++--...++.|+|++.               +.|- +.+.|+-. .+..|.-|++.. ..+...+..|    .
T Consensus        73 MnP~~~iiALrag~~lQiFnle~K~klks~~~~e~VvfWkWi-s~~~l~lV-T~taVyHWsi~~~s~P~kvFdR~~~L~~  150 (494)
T 1bpo_A           73 MNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWI-SLNTVALV-TDNAVYHWSMEGESQPVKMFDRHSSLAG  150 (494)
T ss_dssp             ECSSSSCEEEEETTEEEEEETTTTEEEEEEECSSCCCEEEEE-ETTEEEEE-CSSEEEEEESSSSCCCEEEEECCGGGTT
T ss_pred             eCCCCcEEEEecCCeEEEEchHHhhhhcceecCCCceEEEec-CCCeEEEE-cCCeeEEecccCCCCchhheecchhccc
Confidence            46666644433478899999977               1222 12333333 356899999864 3566666655    3


Q ss_pred             CcEEEEEEcCCC--EEEEEE------CCCeEEEEeCCCcEEEEEeCCCCCEEEEEEeCC---CeEE-EEECC---CeEEE
Q psy7057          80 MAVWGVIQLANG--IIVTGC------ADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLND---TDFV-SCSND---ASIRV  144 (557)
Q Consensus        80 ~~V~~l~~~~~~--~l~sgs------~dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~---~~lv-s~s~D---g~I~v  144 (557)
                      ..|..-..+++.  .+++|-      -.|.+.+|..+.+..+.+.||......+.+..+   ..++ .+...   +.++|
T Consensus       151 ~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi  230 (494)
T 1bpo_A          151 CQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHI  230 (494)
T ss_dssp             CEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEE
T ss_pred             ceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEE
Confidence            466666777776  444443      246788999888888899999776665555432   1233 33332   78999


Q ss_pred             EECCCC--------e-EEEEEeC---CCCcEEEEEEcC--CEEEEEeCCCeEEEEECCCCceE---eeCCccEEEEEEcC
Q psy7057         145 WDSTTG--------K-CVHTMYG---HPNFIYSVAAHG--DLITSGGEDQCVCVYQNKAQNSF---MIPAMSVWAVAILP  207 (557)
Q Consensus       145 wd~~~~--------~-~~~~~~~---h~~~V~~l~~~~--~~l~s~s~Dg~I~iwd~~~~~~~---~~~~~~v~~v~~~p  207 (557)
                      -++...        + .+..+..   ..+...++..+.  ..+..-+.-|.|++||+.+...+   +....+|...+...
T Consensus       231 ~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~  310 (494)
T 1bpo_A          231 IEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHE  310 (494)
T ss_dssp             EECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEET
T ss_pred             EEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeecccCCceEEecccC
Confidence            988432        1 1111111   234555666643  46888899999999998887322   33445666555555


Q ss_pred             CCc-EEEEEcCCcEEEEecCCCCcch
Q psy7057         208 NSD-IVTGSSDGIVRVFSANPDRQAE  232 (557)
Q Consensus       208 ~g~-l~sg~~Dg~I~iwd~~~~~~~~  232 (557)
                      ... ++.....|.|.--.++......
T Consensus       311 ~~~Gi~~Vnr~GqVl~v~v~e~~ivp  336 (494)
T 1bpo_A          311 ATAGIIGVNRKGQVLSVCVEEENIIP  336 (494)
T ss_dssp             TTTEEEEEETTCEEEEEEECTTTHHH
T ss_pred             CCCcEEEEccCceEEEEEEccccchh
Confidence            444 8888899999888888766544

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}

Probab=88.96  E-value=6.2  Score=37.62  Aligned_cols=176  Identities=14%  Similarity=0.147  Sum_probs=83.1

Q ss_pred             CCEEEEEECC-----CeEEEEECCCCe-----EEEEEcccCCcEEEEEEcCCCEEEEEECC-----CeEEEEeCCCcEEE
Q psy7057          49 VNTLLSASWD-----MTAKLWCLESQQ-----CKLTIRQHEMAVWGVIQLANGIIVTGCAD-----KTIKLHSEEGEFLK  113 (557)
Q Consensus        49 ~~~l~sgs~D-----g~i~iwd~~~~~-----~~~~l~~h~~~V~~l~~~~~~~l~sgs~d-----g~I~vwd~~~~~~~  113 (557)
                      +..++.|+.+     ..+.+||+.+.+     .+..+........ ++...+.+++.|+.+     ..+.++|.....-.
T Consensus        63 ~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~-~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~  141 (301)
T 2vpj_A           63 DRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAG-ATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWS  141 (301)
T ss_dssp             TEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCE-EEEETTEEEEECCBCSSCBCCEEEEEETTTTEEE
T ss_pred             CEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCcccee-EEEECCEEEEEcccCCCcccceEEEEcCCCCeEE
Confidence            3445556544     357888877654     2222221111222 222223366666543     35777885443322


Q ss_pred             EEe---CCCCCEEEEEEeCCCe-EEEEECC-----CeEEEEECCCCeEEEE--EeCCCCcEEEEEEcCCEEEEEeCC---
Q psy7057         114 TLT---GHTDCVRGLAVLNDTD-FVSCSND-----ASIRVWDSTTGKCVHT--MYGHPNFIYSVAAHGDLITSGGED---  179 (557)
Q Consensus       114 ~l~---~h~~~V~~l~~~~~~~-lvs~s~D-----g~I~vwd~~~~~~~~~--~~~h~~~V~~l~~~~~~l~s~s~D---  179 (557)
                      .+.   .....- +++.. ++. ++.|+.+     ..+.+||+.+.+-...  +........++..++.+++.|+.+   
T Consensus       142 ~~~~~p~~r~~~-~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~  219 (301)
T 2vpj_A          142 MLGDMQTAREGA-GLVVA-SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTA  219 (301)
T ss_dssp             EEEECSSCCBSC-EEEEE-TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSS
T ss_pred             ECCCCCCCcccc-eEEEE-CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEECCEEEEEeCCCCCc
Confidence            222   111111 22223 455 4566544     4588899877653322  111111223333466677777654   


Q ss_pred             --CeEEEEECCCC--ceEeeCC-ccE-EEEEEcCCCc-EEEEEcC-----CcEEEEecCCC
Q psy7057         180 --QCVCVYQNKAQ--NSFMIPA-MSV-WAVAILPNSD-IVTGSSD-----GIVRVFSANPD  228 (557)
Q Consensus       180 --g~I~iwd~~~~--~~~~~~~-~~v-~~v~~~p~g~-l~sg~~D-----g~I~iwd~~~~  228 (557)
                        ..+.+||..+.  ..+.... ... .+++.. +++ ++.|+.+     ..+.+||..+.
T Consensus       220 ~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~  279 (301)
T 2vpj_A          220 HLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL-RGRLYAIAGYDGNSLLSSIECYDPIID  279 (301)
T ss_dssp             BCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCBCSSSBEEEEEEEETTTT
T ss_pred             ccceEEEEeCCCCcEEECCCCCCcccceeEEEE-CCEEEEEcCcCCCcccccEEEEcCCCC
Confidence              46889997765  3332111 111 122222 555 5566654     34667776543

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}

Probab=87.73  E-value=13  Score=35.58  Aligned_cols=128  Identities=11%  Similarity=0.045  Sum_probs=60.2

Q ss_pred             EEEEECCCCeEEEEEcccCCc--EEEEEEcCCCEEEEEECC--------CeEEEEeCCCcEEEEEeCC--CCCEEEEEEe
Q psy7057          61 AKLWCLESQQCKLTIRQHEMA--VWGVIQLANGIIVTGCAD--------KTIKLHSEEGEFLKTLTGH--TDCVRGLAVL  128 (557)
Q Consensus        61 i~iwd~~~~~~~~~l~~h~~~--V~~l~~~~~~~l~sgs~d--------g~I~vwd~~~~~~~~l~~h--~~~V~~l~~~  128 (557)
                      +.+||+.+.+-.. +..-..+  -.+++...+.+++.|+.+        ..+.++|.....-..+..-  ...-.+++..
T Consensus        69 ~~~~d~~~~~W~~-~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~  147 (315)
T 4asc_A           69 FLQFDHLDSEWLG-MPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSH  147 (315)
T ss_dssp             EEEEETTTTEEEE-CCCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE
T ss_pred             eEEecCCCCeEEE-CCCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEE
Confidence            6678887764321 1111101  012222223366666632        3477788544332222211  1111122233


Q ss_pred             CCCe-EEEEEC-C-----CeEEEEECCCCeEEE--EEeCCCCcEEEEEEcCCEEEEEeCCC-----eEEEEECCCC
Q psy7057         129 NDTD-FVSCSN-D-----ASIRVWDSTTGKCVH--TMYGHPNFIYSVAAHGDLITSGGEDQ-----CVCVYQNKAQ  190 (557)
Q Consensus       129 ~~~~-lvs~s~-D-----g~I~vwd~~~~~~~~--~~~~h~~~V~~l~~~~~~l~s~s~Dg-----~I~iwd~~~~  190 (557)
                       +++ ++.|+. +     ..+.+||+.+.+-..  .+......-.++..++.+++.|+.++     .+.+||..+.
T Consensus       148 -~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~  222 (315)
T 4asc_A          148 -MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDN  222 (315)
T ss_dssp             -TTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTT
T ss_pred             -CCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCC
Confidence             344 556655 2     468889987764322  11111112233344777777777554     5788887665

>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B

Probab=87.66  E-value=15  Score=35.04  Aligned_cols=180  Identities=11%  Similarity=0.043  Sum_probs=97.0

Q ss_pred             CcEEEEEEcCCCEEEEEECCCeEEEEeC--CCcEEEEEeCCCCCEEEEEEeCCCeEEEEECCCeEEEEECCCCeEEEEEe
Q psy7057          80 MAVWGVIQLANGIIVTGCADKTIKLHSE--EGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMY  157 (557)
Q Consensus        80 ~~V~~l~~~~~~~l~sgs~dg~I~vwd~--~~~~~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~~~~~~~  157 (557)
                      ..|..++......++. . ||.+..|-.  .+++- .-..-...|..++......++. . ||.|..|-....-.+..-.
T Consensus        63 ~~i~~ia~G~~hs~~l-~-~G~v~~wG~n~~Gqlg-~P~~~~~~v~~ia~G~~hs~al-~-~G~v~~wG~n~~gqlg~~~  137 (282)
T 3qhy_B           63 SGVDAIAAGNYHSLAL-K-DGEVIAWGGNEDGQTT-VPAEARSGVDAIAAGAWASYAL-K-DGKVIAWGDDSDGQTTVPA  137 (282)
T ss_dssp             SCCCEEEECSSEEEEE-E-TTEEEEEECCTTSTTC-CCGGGSSSEEEEEEETTEEEEE-E-TTEEEEEECCTTSTTSCCG
T ss_pred             CCEEEEEeCCCEEEEE-E-CCEEEEeeCCCCCCCC-CCcccCCCeEEEECcCCEEEEE-e-CCeEEEecCCCCCcCCCCc
Confidence            3566777665555555 4 899999962  22210 0011124677777665544443 3 8999999754321111111


Q ss_pred             CCCCcEEEEEEcCCEEEEEeCCCeEEEEECCCCceEee---CCccEEEEEEcCCCcEEEEEcCCcEEEEecCCCCcchhH
Q psy7057         158 GHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQNSFMI---PAMSVWAVAILPNSDIVTGSSDGIVRVFSANPDRQAEDA  234 (557)
Q Consensus       158 ~h~~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~---~~~~v~~v~~~p~g~l~sg~~Dg~I~iwd~~~~~~~~~~  234 (557)
                      .....|..++......+.-. ||.|+.|-......+..   ....|..++.-....++.  .||.|+.|-.+..-+....
T Consensus       138 ~~~~~i~~i~~G~~~~~~l~-~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~hs~al--~~G~v~~wG~n~~gqlg~p  214 (282)
T 3qhy_B          138 EAQSGVTALDGGVYTALAVK-NGGVIAWGDNYFGQTTVPAEAQSGVDDVAGGIFHSLAL--KDGKVIAWGDNRYKQTTVP  214 (282)
T ss_dssp             GGGSSEEEEEECSSEEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEEEEE--ETTEEEEEECCTTSTTCCC
T ss_pred             cCCCCeEEEEcccCEEEEEE-CCEEEEecCCCCCCCCCceecCCCeEEEEecCCEEEEE--ECCeEEEEECCCCCCCCCC
Confidence            12346778877444433344 79999997543311111   123577776655444555  6999999987654333211


Q ss_pred             HHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCC
Q psy7057         235 VQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPD  273 (557)
Q Consensus       235 ~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~  273 (557)
                      .  .....+..+.....   ..++.. ||.|..|-.+..
T Consensus       215 ~--~~~~~v~~i~~G~~---h~~al~-~g~v~~wG~n~~  247 (282)
T 3qhy_B          215 T--EALSGVSAIASGEW---YSLALK-NGKVIAWGSSRT  247 (282)
T ss_dssp             G--GGGSSCCEEEECSS---CEEEEE-TTEEEEESTTCC
T ss_pred             c--ccCCCceEEEcCCC---EEEEEE-CCEEEEecCCCC
Confidence            1  11123444443322   223444 999999986653

>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*

Probab=86.82  E-value=25  Score=34.61  Aligned_cols=73  Identities=12%  Similarity=0.124  Sum_probs=48.7

Q ss_pred             cCCcEEEEEEcCCCEEEEEECCCeEEEEeCCCc-EEEEEe---CCCCCEEEEEEeCC----CeEEEEEC----C----Ce
Q psy7057          78 HEMAVWGVIQLANGIIVTGCADKTIKLHSEEGE-FLKTLT---GHTDCVRGLAVLND----TDFVSCSN----D----AS  141 (557)
Q Consensus        78 h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~~~~-~~~~l~---~h~~~V~~l~~~~~----~~lvs~s~----D----g~  141 (557)
                      .-...+.++|.|++.|+.+..++.|++++.++. .+..+.   ........|+++|+    +.|..+..    +    ..
T Consensus        27 ~l~~P~~ia~~pdG~l~V~e~~g~I~~~d~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~  106 (354)
T 3a9g_A           27 DLEVPWSIAPLGGGRYLVTERPGRLVLISPSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR  106 (354)
T ss_dssp             SCSCEEEEEEEETTEEEEEETTTEEEEECSSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred             CCCCCeEEEEcCCCeEEEEeCCCEEEEEeCCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence            345678999999997777788899999986665 222211   12356899999997    55543332    3    56


Q ss_pred             EEEEECCCC
Q psy7057         142 IRVWDSTTG  150 (557)
Q Consensus       142 I~vwd~~~~  150 (557)
                      |..|+....
T Consensus       107 v~r~~~~~~  115 (354)
T 3a9g_A          107 VIRGRLDGS  115 (354)
T ss_dssp             EEEEEECSS
T ss_pred             EEEEEECCC
Confidence            777776543

>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A

Probab=86.73  E-value=18  Score=37.27  Aligned_cols=29  Identities=21%  Similarity=0.173  Sum_probs=23.0

Q ss_pred             ccEEEEEEcCCCcEEEEECCC-cEEEEcCC
Q psy7057          13 MDVRSLSVTPDGCILSASRDK-SAKLWKPN   41 (557)
Q Consensus        13 ~~V~~l~~spdg~l~sgs~Dg-~V~iWd~~   41 (557)
                      ..-++|+|.|+|+|+.+...+ .|++++..
T Consensus        27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~   56 (454)
T 1cru_A           27 NKPHALLWGPDNQIWLTERATGKILRVNPE   56 (454)
T ss_dssp             SSEEEEEECTTSCEEEEETTTCEEEEECTT
T ss_pred             CCceEEEEcCCCcEEEEEcCCCEEEEEECC
Confidence            456799999999988888775 68888653

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=85.81  E-value=22  Score=36.30  Aligned_cols=88  Identities=24%  Similarity=0.259  Sum_probs=55.9

Q ss_pred             CCeEEEEECCCCeEEEEEeCC----CCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC---------------ceEee--
Q psy7057         139 DASIRVWDSTTGKCVHTMYGH----PNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ---------------NSFMI--  195 (557)
Q Consensus       139 Dg~I~vwd~~~~~~~~~~~~h----~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~---------------~~~~~--  195 (557)
                      ++.||.-++.....-+.+...    -..|..+..  +|++|+..+ +..|.|-.+...               +.+..  
T Consensus        40 ~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~  118 (452)
T 3pbp_A           40 DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDE  118 (452)
T ss_dssp             TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGG
T ss_pred             CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccccceeEEEcCC
Confidence            366777676543333333322    124556666  666666664 457777764411               01221  


Q ss_pred             ----CCccEEEEEEcCCCc----EEEEEcCCcEEEEecCC
Q psy7057         196 ----PAMSVWAVAILPNSD----IVTGSSDGIVRVFSANP  227 (557)
Q Consensus       196 ----~~~~v~~v~~~p~g~----l~sg~~Dg~I~iwd~~~  227 (557)
                          +..+|..+.|+|-+.    |++-.+|+.||+||+..
T Consensus       119 ~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~  158 (452)
T 3pbp_A          119 EEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILN  158 (452)
T ss_dssp             CC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTC
T ss_pred             cccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEccc
Confidence                246799999999764    99999999999999986

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}

Probab=85.54  E-value=26  Score=33.46  Aligned_cols=173  Identities=12%  Similarity=0.129  Sum_probs=82.5

Q ss_pred             EEEEECCCeEEEEECCCCeEEE-EEccc-CCcEEEEEEcCCCEEEEEEC-----C------CeEEEEeCCCcEEEEEeCC
Q psy7057          52 LLSASWDMTAKLWCLESQQCKL-TIRQH-EMAVWGVIQLANGIIVTGCA-----D------KTIKLHSEEGEFLKTLTGH  118 (557)
Q Consensus        52 l~sgs~Dg~i~iwd~~~~~~~~-~l~~h-~~~V~~l~~~~~~~l~sgs~-----d------g~I~vwd~~~~~~~~l~~h  118 (557)
                      ++.|+  ..+.+||+.+.+-.. .+... ...-.+++...+.+++.|+.     .      ..+.+||.....-..+..-
T Consensus         8 ~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~   85 (315)
T 4asc_A            8 FMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPL   85 (315)
T ss_dssp             EEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCB
T ss_pred             EEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCC
Confidence            34444  568889988876332 22211 22223333333446777773     1      1256677544333332211


Q ss_pred             CCC--EEEEEEeCCCe-EEEEECC--------CeEEEEECCCCeEEE--EEeCCCCcEEEEEEcCCEEEEEeC-C-----
Q psy7057         119 TDC--VRGLAVLNDTD-FVSCSND--------ASIRVWDSTTGKCVH--TMYGHPNFIYSVAAHGDLITSGGE-D-----  179 (557)
Q Consensus       119 ~~~--V~~l~~~~~~~-lvs~s~D--------g~I~vwd~~~~~~~~--~~~~h~~~V~~l~~~~~~l~s~s~-D-----  179 (557)
                      ..+  -.+++.. ++. ++.|+.+        ..+.+||+.+.+-..  .+......-.++..++..++.|+. +     
T Consensus        86 p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~  164 (315)
T 4asc_A           86 PSPRCLFGLGEA-LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCL  164 (315)
T ss_dssp             SSCEESCEEEEE-TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBC
T ss_pred             CcchhceeEEEE-CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCccc
Confidence            111  1122223 445 4555532        458889987764322  111111222233346666777765 2     


Q ss_pred             CeEEEEECCCC--ceEeeCC-ccE-EEEEEcCCCc-EEEEEcCC-----cEEEEecCCC
Q psy7057         180 QCVCVYQNKAQ--NSFMIPA-MSV-WAVAILPNSD-IVTGSSDG-----IVRVFSANPD  228 (557)
Q Consensus       180 g~I~iwd~~~~--~~~~~~~-~~v-~~v~~~p~g~-l~sg~~Dg-----~I~iwd~~~~  228 (557)
                      ..+.+||..+.  ..+.... ... .+++.. +++ ++.|+.++     .+.+||..+.
T Consensus       165 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~  222 (315)
T 4asc_A          165 NKMCVYDPKKFEWKELAPMQTARSLFGATVH-DGRIIVAAGVTDTGLTSSAEVYSITDN  222 (315)
T ss_dssp             CCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEEEEECSSSEEEEEEEEETTTT
T ss_pred             ceEEEEeCCCCeEEECCCCCCchhceEEEEE-CCEEEEEeccCCCCccceEEEEECCCC
Confidence            46888987655  2222111 111 122222 556 66777654     4778887665

>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A

Probab=85.47  E-value=22  Score=41.99  Aligned_cols=210  Identities=12%  Similarity=0.192  Sum_probs=120.5

Q ss_pred             EcCCCcEEEEECCCcEEEEcCCC---------------CCCCCCCCEEEEEECCCeEEEEECCC-CeEEEEEccc----C
Q psy7057          20 VTPDGCILSASRDKSAKLWKPND---------------LSPGAKVNTLLSASWDMTAKLWCLES-QQCKLTIRQH----E   79 (557)
Q Consensus        20 ~spdg~l~sgs~Dg~V~iWd~~~---------------~~~~~~~~~l~sgs~Dg~i~iwd~~~-~~~~~~l~~h----~   79 (557)
                      .+|..++++--...++.|+|+.+               +.|- +.+.|+.. .+..|.-|++.. ..+...+..|    .
T Consensus        73 MnP~~~iiALrag~~lQiFnl~~k~klks~~~~e~VvfWkWi-s~~~l~lV-T~~aVyHW~~~~~s~P~k~fdR~~~L~~  150 (1630)
T 1xi4_A           73 MNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWI-SLNTVALV-TDNAVYHWSMEGESQPVKMFDRHSSLAG  150 (1630)
T ss_pred             cCCCcceEEEecCCeEEEeehHHhhhhcccccCCCceEEEec-CCCeeEEE-cCCeEEEeccCCCCccHHHHhcchhccc
Confidence            34555555555578889998865               2222 12333333 256799999864 2444444444    4


Q ss_pred             CcEEEEEEcCCC--EEEEEE------CCCeEEEEeCCCcEEEEEeCCCCCEEEEEEeCC---CeEEE-EE---CCCeEEE
Q psy7057          80 MAVWGVIQLANG--IIVTGC------ADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLND---TDFVS-CS---NDASIRV  144 (557)
Q Consensus        80 ~~V~~l~~~~~~--~l~sgs------~dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~---~~lvs-~s---~Dg~I~v  144 (557)
                      ..|..-..+++.  .+++|-      -.|.+.+|+.+.+..+.+.||......+.....   ..+++ +.   ..+.++|
T Consensus       151 ~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi  230 (1630)
T 1xi4_A          151 CQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHI  230 (1630)
T ss_pred             CeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEE
Confidence            456666667766  444443      357888998777777788888776655554322   22332 21   2368888


Q ss_pred             EECCCC---e------EEEEEeCC---CCcEEEEEEcC--CEEEEEeCCCeEEEEECCCCceE---eeCCccEEEEEEcC
Q psy7057         145 WDSTTG---K------CVHTMYGH---PNFIYSVAAHG--DLITSGGEDQCVCVYQNKAQNSF---MIPAMSVWAVAILP  207 (557)
Q Consensus       145 wd~~~~---~------~~~~~~~h---~~~V~~l~~~~--~~l~s~s~Dg~I~iwd~~~~~~~---~~~~~~v~~v~~~p  207 (557)
                      -++...   .      .+..+...   .+...++..+.  ..+...+.-|.|.+||+.+...+   +....+|...+..+
T Consensus       231 ~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF~~~~~~  310 (1630)
T 1xi4_A          231 IEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHE  310 (1630)
T ss_pred             EecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhccccCCceEEeccCC
Confidence            887432   1      11111111   23334555533  36778888999999998776222   22334454444443


Q ss_pred             C-CcEEEEEcCCcEEEEecCCCCcc
Q psy7057         208 N-SDIVTGSSDGIVRVFSANPDRQA  231 (557)
Q Consensus       208 ~-g~l~sg~~Dg~I~iwd~~~~~~~  231 (557)
                      . +.++.....|.|.--.++.....
T Consensus       311 ~~~g~~~vnr~G~vl~v~v~~~~iv  335 (1630)
T 1xi4_A          311 ATAGIIGVNRKGQVLSVCVEEENII  335 (1630)
T ss_pred             CCCceEEEcCCceEEEEEEccchhh
Confidence            3 33777778888777777765544

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A

Probab=85.41  E-value=26  Score=33.36  Aligned_cols=98  Identities=13%  Similarity=0.166  Sum_probs=50.0

Q ss_pred             CCe-EEEEECC-----CeEEEEECCCCeEEEE--EeCCCCcEEEEEEcCCEEEEEeCC-----CeEEEEECCCC--ceEe
Q psy7057         130 DTD-FVSCSND-----ASIRVWDSTTGKCVHT--MYGHPNFIYSVAAHGDLITSGGED-----QCVCVYQNKAQ--NSFM  194 (557)
Q Consensus       130 ~~~-lvs~s~D-----g~I~vwd~~~~~~~~~--~~~h~~~V~~l~~~~~~l~s~s~D-----g~I~iwd~~~~--~~~~  194 (557)
                      ++. ++.|+.+     ..+.+||+.+.+-...  +......-.++.+++.+++.|+.+     ..+.+||..+.  ..+.
T Consensus       121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~  200 (308)
T 1zgk_A          121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMIT  200 (308)
T ss_dssp             TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEECC
T ss_pred             CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCC
Confidence            445 4455433     4588899877643221  111111222333466667777654     45888887655  2221


Q ss_pred             e---CCccEEEEEEcCCCc-EEEEEcC-----CcEEEEecCCCC
Q psy7057         195 I---PAMSVWAVAILPNSD-IVTGSSD-----GIVRVFSANPDR  229 (557)
Q Consensus       195 ~---~~~~v~~v~~~p~g~-l~sg~~D-----g~I~iwd~~~~~  229 (557)
                      .   ..... +++.. ++. ++.|+.+     ..+.+||..+..
T Consensus       201 ~~p~~r~~~-~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~  242 (308)
T 1zgk_A          201 AMNTIRSGA-GVCVL-HNCIYAAGGYDGQDQLNSVERYDVETET  242 (308)
T ss_dssp             CCSSCCBSC-EEEEE-TTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred             CCCCccccc-eEEEE-CCEEEEEeCCCCCCccceEEEEeCCCCc
Confidence            1   11111 22222 555 5666654     558888887653

>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*

Probab=85.11  E-value=6.3  Score=36.46  Aligned_cols=98  Identities=7%  Similarity=-0.088  Sum_probs=59.7

Q ss_pred             CCEEEEEEeCCCeEEEEECCCeEEEEECCCCeE------EEEEe--CCCCcEEEEEEcC--CEEEEEeCCCeEEEEECCC
Q psy7057         120 DCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKC------VHTMY--GHPNFIYSVAAHG--DLITSGGEDQCVCVYQNKA  189 (557)
Q Consensus       120 ~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~~------~~~~~--~h~~~V~~l~~~~--~~l~s~s~Dg~I~iwd~~~  189 (557)
                      ..+..++++|++.|.+. .+|.+.-.+..+...      -..+-  +-.. ..++.+++  .+.++  .||.|+-++..+
T Consensus        41 ~~~~~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~-F~a~~fD~~G~LYav--~dG~iyr~~pP~  116 (236)
T 1tl2_A           41 SNFKFLFLSPGGELYGV-LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQ-FQFLFFDPNGYLYAV--SKDKLYKASPPQ  116 (236)
T ss_dssp             TTCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHCEEEECSCGGG-CSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred             ccceeEEECCCccEEEE-eCCeEEEECCCCCCcccccccccEeccccccc-ceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence            46779999999987766 777777766544111      11111  1111 35667744  44444  669998887422


Q ss_pred             C--c------eEee--CCccEEEEEEcCCCcEEEEEcCCcEEE
Q psy7057         190 Q--N------SFMI--PAMSVWAVAILPNSDIVTGSSDGIVRV  222 (557)
Q Consensus       190 ~--~------~~~~--~~~~v~~v~~~p~g~l~sg~~Dg~I~i  222 (557)
                      .  .      ...+  --..+..|.+.|+|.|.+.. |+.++-
T Consensus       117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~-dg~lyr  158 (236)
T 1tl2_A          117 SDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH-GQQFYK  158 (236)
T ss_dssp             STTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE-TTEEEE
T ss_pred             CCCCceeccccEeccCCCCceEEEEECCCceEEEEe-CCcEEe
Confidence            1  1      1111  11467999999999977777 888544

>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}

Probab=84.19  E-value=5.7  Score=39.29  Aligned_cols=104  Identities=6%  Similarity=0.069  Sum_probs=66.6

Q ss_pred             CCEEEEEECCCeEEEEe-CCCcEEEEEeCC-CCCEEEEEEe---CCCeEEEE--ECCCeEEEEECCCCeEEEEEeC----
Q psy7057          90 NGIIVTGCADKTIKLHS-EEGEFLKTLTGH-TDCVRGLAVL---NDTDFVSC--SNDASIRVWDSTTGKCVHTMYG----  158 (557)
Q Consensus        90 ~~~l~sgs~dg~I~vwd-~~~~~~~~l~~h-~~~V~~l~~~---~~~~lvs~--s~Dg~I~vwd~~~~~~~~~~~~----  158 (557)
                      ++.++.++.||.|.-.| .+|+.+.++... ..++....-.   .++.++.+  +.||.|..++..+|.....+..    
T Consensus        10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv   89 (339)
T 2be1_A           10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLV   89 (339)
T ss_dssp             EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHH
T ss_pred             CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccce
Confidence            35789999999999999 678888887653 1222221100   12344443  6899999999888865544431    


Q ss_pred             CCCcEEE---EEE-------cCCEEEEEeCCCeEEEEECCCCceE
Q psy7057         159 HPNFIYS---VAA-------HGDLITSGGEDQCVCVYQNKAQNSF  193 (557)
Q Consensus       159 h~~~V~~---l~~-------~~~~l~s~s~Dg~I~iwd~~~~~~~  193 (557)
                      ...++..   ...       .+..+++|+.++.+...|..+.+.+
T Consensus        90 ~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~  134 (339)
T 2be1_A           90 STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEII  134 (339)
T ss_dssp             TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEE
T ss_pred             eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEE
Confidence            1222321   001       4557889999999999998877444

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	557
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	3e-22
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	2e-20
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	1e-15
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	2e-11
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	3e-10
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	3e-20
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	2e-13
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	6e-10
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	3e-06
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	0.003
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	7e-16
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	7e-14
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	2e-13
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	2e-11
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	3e-11
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	2e-15
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	9e-12
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	8e-11
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	1e-07
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	4e-15
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	4e-10
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	8e-05
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	8e-14
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	1e-09
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	3e-09
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	1e-08
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	6e-06
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	2e-05
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	3e-11
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	6e-10
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	0.001
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	2e-09
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	1e-06
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	7e-05
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	0.004
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	4e-09
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	1e-08
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	9e-07
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	4e-06
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	9e-09
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	3e-07
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	1e-06
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	0.002
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	1e-07
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	9e-06
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	4e-05
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	1e-04
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	2e-07
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	3e-06
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	2e-04
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	0.003
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	4e-07
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	1e-06
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	5e-06
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	2e-05
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	2e-04
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	1e-06
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	2e-06
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	3e-04
d1pbyb_	337	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	1e-06
d1pbyb_	337	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	9e-05
d1pbyb_	337	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	8e-04
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	1e-06
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	1e-04
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	8e-04
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	0.001
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	0.003
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	2e-06
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	4e-06
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	9e-05
d2bbkh_	355	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	2e-05
d1l0qa2	301	b.69.2.3 (A:1-301) Surface layer protein {Archaeon	3e-05
d1l0qa2	301	b.69.2.3 (A:1-301) Surface layer protein {Archaeon	5e-04
d1l0qa2	301	b.69.2.3 (A:1-301) Surface layer protein {Archaeon	0.001
d1ri6a_	333	b.69.11.1 (A:) Putative isomerase YbhE {Escherichi	0.002
d1qksa2	432	b.70.2.1 (A:136-567) C-terminal (heme d1) domain o	0.004

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 95.2 bits (235), Expect = 3e-22
 Identities = 48/184 (26%), Positives = 82/184 (44%), Gaps = 10/184 (5%)

Query: 8   LYGHSMDVRSLSVTPDGCIL-SASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCL 66
             GH   VR +    DG ++ S S D++ ++W    ++       L      +    W  
Sbjct: 139 FTGHREWVRMVRPNQDGTLIASCSNDQTVRVW---VVATKECKAELREHRHVVECISWAP 195

Query: 67  ESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKL-HSEEGEFLKTLTGHTDCVRGL 125
           ES    ++                  +++G  DKTIK+     G  L TL GH + VRG+
Sbjct: 196 ESSYSSISEATGSETKK--SGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGV 253

Query: 126 AVLNDTDF-VSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAH--GDLITSGGEDQCV 182
              +   F +SC++D ++RVWD    +C+ T+  H +F+ S+  H     + +G  DQ V
Sbjct: 254 LFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTV 313

Query: 183 CVYQ 186
            V++
Sbjct: 314 KVWE 317

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 90.6 bits (223), Expect = 2e-20
 Identities = 48/203 (23%), Positives = 87/203 (42%), Gaps = 29/203 (14%)

Query: 50  NTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEE 108
           + ++SAS D T K+W +++  C  T   H   V  V    +G +I +   D+T+++    
Sbjct: 114 DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 173

Query: 109 G-EFLKTLTGHTDCVRGLAVLNDTD---------------------FVSCSNDASIRVWD 146
             E    L  H   V  ++   ++                       +S S D +I++WD
Sbjct: 174 TKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWD 233

Query: 147 STTGKCVHTMYGHPNFIYSVAAH--GDLITSGGEDQCVCVY---QNKAQNSFMIPAMSVW 201
            +TG C+ T+ GH N++  V  H  G  I S  +D+ + V+     +   +       V 
Sbjct: 234 VSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVT 293

Query: 202 AVAILPNSD-IVTGSSDGIVRVF 223
           ++     +  +VTGS D  V+V+
Sbjct: 294 SLDFHKTAPYVVTGSVDQTVKVW 316

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 75.5 bits (184), Expect = 1e-15
 Identities = 61/333 (18%), Positives = 103/333 (30%), Gaps = 101/333 (30%)

Query: 8   LYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCLE 67
           L GH   V  +   P                           + ++SAS D T K+W  E
Sbjct: 13  LSGHRSPVTRVIFHPVF-------------------------SVMVSASEDATIKVWDYE 47

Query: 68  SQQCKLTIRQHEMAVWGVIQLA-------------------------------------- 89
           +   + T++ H  +V  +                                          
Sbjct: 48  TGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSV 107

Query: 90  -----NGIIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTDFV-SCSNDASI 142
                   IV+   DKTIK+   + G  +KT TGH + VR +    D   + SCSND ++
Sbjct: 108 SIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTV 167

Query: 143 RVWDSTTGKCVHTMYGHPNFIYSVAAH----------------------GDLITSGGEDQ 180
           RVW   T +C   +  H + +  ++                        G  + SG  D+
Sbjct: 168 RVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 227

Query: 181 CVCVYQ---NKAQNSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQ 236
            + ++         + +     V  V        I++ + D  +RV+     R       
Sbjct: 228 TIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCM--KTL 285

Query: 237 AQYAEEVKKLK-SANEQEIGGVKVSDDGIVRVF 268
             +   V  L        +  V  S D  V+V+
Sbjct: 286 NAHEHFVTSLDFHKTAPYV--VTGSVDQTVKVW 316

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 62.8 bits (151), Expect = 2e-11
 Identities = 33/144 (22%), Positives = 58/144 (40%), Gaps = 29/144 (20%)

Query: 6   TALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWC 65
           +++   +      S  P   +LS SRDK                          T K+W 
Sbjct: 200 SSISEATGSETKKSGKPGPFLLSGSRDK--------------------------TIKMWD 233

Query: 66  LESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKL-HSEEGEFLKTLTGHTDCVR 123
           + +  C +T+  H+  V GV+  + G  I++   DKT+++   +    +KTL  H   V 
Sbjct: 234 VSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVT 293

Query: 124 GLAVLNDTD-FVSCSNDASIRVWD 146
            L         V+ S D +++VW+
Sbjct: 294 SLDFHKTAPYVVTGSVDQTVKVWE 317

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 59.4 bits (142), Expect = 3e-10
 Identities = 25/117 (21%), Positives = 42/117 (35%), Gaps = 7/117 (5%)

Query: 114 TLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGDL 172
            L+GH   V  +         VS S DA+I+VWD  TG    T+ GH + +  ++     
Sbjct: 12  ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 71

Query: 173 ITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILP------NSDIVTGSSDGIVRVF 223
                    + +     Q    I  M      +           IV+ S D  ++++
Sbjct: 72  KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMW 128

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 89.8 bits (221), Expect = 3e-20
 Identities = 29/143 (20%), Positives = 56/143 (39%), Gaps = 7/143 (4%)

Query: 50  NTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEE 108
              +S + D +AKLW +    C+ T   HE  +  +    NG    TG  D T +L    
Sbjct: 197 RLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLR 256

Query: 109 GEFLKTLTGHTDCVRGLAVL----NDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIY 164
            +       H + + G+  +    +    ++  +D +  VWD+        + GH N + 
Sbjct: 257 ADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVS 316

Query: 165 SVAAH--GDLITSGGEDQCVCVY 185
            +     G  + +G  D  + ++
Sbjct: 317 CLGVTDDGMAVATGSWDSFLKIW 339

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 69.4 bits (168), Expect = 2e-13
 Identities = 27/144 (18%), Positives = 54/144 (37%), Gaps = 30/144 (20%)

Query: 8   LYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCLE 67
             GH  D+ ++   P+G                         N   + S D T +L+ L 
Sbjct: 222 FTGHESDINAICFFPNG-------------------------NAFATGSDDATCRLFDLR 256

Query: 68  SQQCKLTIRQHEM--AVWGVIQLANG-IIVTGCADKTIKL-HSEEGEFLKTLTGHTDCVR 123
           + Q  +T     +   +  V    +G +++ G  D    +  + + +    L GH + V 
Sbjct: 257 ADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVS 316

Query: 124 GLAVLNDTD-FVSCSNDASIRVWD 146
            L V +D     + S D+ +++W+
Sbjct: 317 CLGVTDDGMAVATGSWDSFLKIWN 340

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 58.6 bits (140), Expect = 6e-10
 Identities = 54/276 (19%), Positives = 91/276 (32%), Gaps = 40/276 (14%)

Query: 8   LYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCLE 67
           L GH   + ++    D                            L+SAS D    +W   
Sbjct: 51  LRGHLAKIYAMHWGTDS-------------------------RLLVSASQDGKLIIWDSY 85

Query: 68  SQQCKLTIRQHEMAVWGVI------QLANGIIVTGCADKTIKLHSEEGEFLKTLTGHTDC 121
           +      I      V           +A G +   C+   +K         + L GHT  
Sbjct: 86  TTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGY 145

Query: 122 VRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFI--YSVAAHGDLITSGGED 179
           +     L+D   V+ S D +  +WD  TG+   T  GH   +   S+A    L  SG  D
Sbjct: 146 LSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACD 205

Query: 180 QCVCVY---QNKAQNSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAV 235
               ++   +   + +F      + A+   PN +   TGS D   R+F    D++     
Sbjct: 206 ASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYS 265

Query: 236 QAQYAEEVKKLK-SANEQEIGGVKVSDDGIVRVFSA 270
                  +  +  S + + +  +   DD    V+ A
Sbjct: 266 HDNIICGITSVSFSKSGRLL--LAGYDDFNCNVWDA 299

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 47.0 bits (110), Expect = 3e-06
 Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 1/60 (1%)

Query: 113 KTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGD 171
           +TL GH   +  +    D+   VS S D  + +WDS T   VH +    +++ + A    
Sbjct: 49  RTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPS 108

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 37.4 bits (85), Expect = 0.003
 Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)

Query: 3   KLSTALYGHSMDVRSLSVTPDG-CILSASRDKSAKLW 38
             +  L GH   V  L VT DG  + + S D   K+W
Sbjct: 303 DRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.8 bits (187), Expect = 7e-16
 Identities = 58/243 (23%), Positives = 91/243 (37%), Gaps = 21/243 (8%)

Query: 3   KLSTALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGAKVNTLLS-------- 54
           K    L GH+  V S  +  +  I  ++                       +        
Sbjct: 48  KCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE 107

Query: 55  -----ASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHS-EE 108
                 S D T ++W +E+ QC   +  H  AV  V       +V+G  D  +K+   E 
Sbjct: 108 KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGR-RVVSGAYDFMVKVWDPET 166

Query: 109 GEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA 168
              L TL GHT+ V  L   +    VS S D SIRVWD  TG C+HT+ GH +    +  
Sbjct: 167 ETCLHTLQGHTNRVYSLQF-DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL 225

Query: 169 HGDLITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILPNSD-----IVTGSSDGIVRVF 223
             +++ SG  D  V ++  K               + +         ++T S DG V+++
Sbjct: 226 KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLW 285

Query: 224 SAN 226
              
Sbjct: 286 DLK 288

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.6 bits (171), Expect = 7e-14
 Identities = 30/141 (21%), Positives = 65/141 (46%), Gaps = 13/141 (9%)

Query: 50  NTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKL----H 105
             ++S S D + ++W +E+  C  T+  H+    G+ +L + I+V+G AD T+K+     
Sbjct: 188 IHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGM-ELKDNILVSGNADSTVKIWDIKT 246

Query: 106 SEEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMY-----GHP 160
            +  + L+    H   V  L    +   ++ S+D ++++WD  TG+ +  +      G  
Sbjct: 247 GQCLQTLQGPNKHQSAVTCLQFNKNF-VITSSDDGTVKLWDLKTGEFIRNLVTLESGGSG 305

Query: 161 NFIYSVAAH--GDLITSGGED 179
             ++ + A     +   G  +
Sbjct: 306 GVVWRIRASNTKLVCAVGSRN 326

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.1 bits (167), Expect = 2e-13
 Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 2/125 (1%)

Query: 108 EGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVA 167
           E +  K L GH D V           VS S+D +++VW + TGKC+ T+ GH   ++S  
Sbjct: 5   ELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQ 64

Query: 168 AHGDLITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILPNSD--IVTGSSDGIVRVFSA 225
              ++I SG  D+ + V+  +              V  +   +  +V+GS D  +RV+  
Sbjct: 65  MRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDI 124

Query: 226 NPDRQ 230
              + 
Sbjct: 125 ETGQC 129

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.3 bits (152), Expect = 2e-11
 Identities = 39/169 (23%), Positives = 73/169 (43%), Gaps = 4/169 (2%)

Query: 64  WCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHS-EEGEFLKTLTGHTDCV 122
           W     +    ++ H+  V   +Q     IV+G  D T+K+ S   G+ L+TL GHT  V
Sbjct: 1   WRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV 60

Query: 123 RGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGDLITSGGEDQCV 182
               + ++      ++         T  +C+HT+YGH + +  +  H   + SG  D  +
Sbjct: 61  WSSQMRDNIIISGSTDRTLKVWNAETG-ECIHTLYGHTSTVRCMHLHEKRVVSGSRDATL 119

Query: 183 CVYQNKAQNSFMIPAMSVWAVAIL--PNSDIVTGSSDGIVRVFSANPDR 229
            V+  +      +    V AV  +      +V+G+ D +V+V+    + 
Sbjct: 120 RVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETET 168

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.9 bits (151), Expect = 3e-11
 Identities = 62/231 (26%), Positives = 89/231 (38%), Gaps = 29/231 (12%)

Query: 2   YKLSTALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTA 61
            K    L GH   V +  +   G                         N ++S S D T 
Sbjct: 6   LKSPKVLKGHDDHVIT-CLQFCG-------------------------NRIVSGSDDNTL 39

Query: 62  KLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKTLTGHTDC 121
           K+W   + +C  T+  H   VW      N II           ++E GE + TL GHT  
Sbjct: 40  KVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTST 99

Query: 122 VRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGDLITSGGEDQC 181
           VR    L++   VS S DA++RVWD  TG+C+H + GH   +  V   G  + SG  D  
Sbjct: 100 VRC-MHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFM 158

Query: 182 VCVYQNKAQNSFMIPAMSVWAVAILPNSD--IVTGSSDGIVRVFSANPDRQ 230
           V V+  + +            V  L      +V+GS D  +RV+       
Sbjct: 159 VKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNC 209

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.9 bits (182), Expect = 2e-15
 Identities = 30/141 (21%), Positives = 58/141 (41%), Gaps = 10/141 (7%)

Query: 54  SASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLK 113
           SAS D T K+W   + +   T+  H+  +   +Q  + ++V+G +D TI+L   E     
Sbjct: 153 SASGDRTIKVWNTSTCEFVRTLNGHKRGIA-CLQYRDRLVVSGSSDNTIRLWDIECGACL 211

Query: 114 TLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTG---------KCVHTMYGHPNFIY 164
            +    + +      ++   VS + D  I+VWD              C+ T+  H   ++
Sbjct: 212 RVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVF 271

Query: 165 SVAAHGDLITSGGEDQCVCVY 185
            +      I S   D  + ++
Sbjct: 272 RLQFDEFQIVSSSHDDTILIW 292

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.7 bits (153), Expect = 9e-12
 Identities = 57/289 (19%), Positives = 102/289 (35%), Gaps = 41/289 (14%)

Query: 10  GHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPNDLSPGAKVNTL-------LSASWDMTA 61
             S  V  L    D   I+S  RD + K+W   D +       L       L   +D   
Sbjct: 13  ETSKGVYCLQ--YDDQKIVSGLRDNTIKIW---DKNTLECKRILTGHTGSVLCLQYDERV 67

Query: 62  KL---------WCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKL----HSEE 108
            +             +    L    H       ++  NG++VT   D++I +       +
Sbjct: 68  IITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTD 127

Query: 109 GEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA 168
               + L GH   V      +D   VS S D +I+VW+++T + V T+ GH   I  +  
Sbjct: 128 ITLRRVLVGHRAAVNV-VDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY 186

Query: 169 HGDLITSGGEDQCVCVY--QNKAQNSFMIPAMSVWAVAILPNSDIVTGSSDGIVRVFSAN 226
              L+ SG  D  + ++  +  A    +     +       N  IV+G+ DG ++V+   
Sbjct: 187 RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVW--- 243

Query: 227 PDRQAEDAVQAQYAEEVKKLKSANEQEIGGVK--------VSDDGIVRV 267
            D  A    +A       +    +   +  ++         S D  + +
Sbjct: 244 -DLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILI 291

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.0 bits (146), Expect = 8e-11
 Identities = 30/107 (28%), Positives = 47/107 (43%), Gaps = 12/107 (11%)

Query: 50  NTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKL----- 104
             ++S S D T +LW +E   C L + +    +   I+  N  IV+G  D  IK+     
Sbjct: 189 RLVVSGSSDNTIRLWDIECGAC-LRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVA 247

Query: 105 -----HSEEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWD 146
                       L+TL  H+  V  L   ++   VS S+D +I +WD
Sbjct: 248 ALDPRAPAGTLCLRTLVEHSGRVFRLQF-DEFQIVSSSHDDTILIWD 293

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.4 bits (121), Expect = 1e-07
 Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 2/92 (2%)

Query: 112 LKTLTGHTDCVRGLAVL--NDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAH 169
           L+ +   ++  +G+  L  +D   VS   D +I++WD  T +C   + GH   +  +   
Sbjct: 5   LQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYD 64

Query: 170 GDLITSGGEDQCVCVYQNKAQNSFMIPAMSVW 201
             +I +G  D  V V+                
Sbjct: 65  ERVIITGSSDSTVRVWDVNTGEMLNTLIHHCE 96

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 74.8 bits (182), Expect = 4e-15
 Identities = 33/167 (19%), Positives = 67/167 (40%), Gaps = 30/167 (17%)

Query: 50  NTLLSASWDMTAKLWCLESQQCKLTIRQ-------HEMAVWGVIQLANG-IIVTGCADKT 101
             + + S D   ++W  E+      +         H+ +V+ V+   +G  +V+G  D++
Sbjct: 218 KYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRS 277

Query: 102 IKLHSEEG-------------EFLKTLTGHTDCVRGLAVLNDTDF-VSCSNDASIRVWDS 147
           +KL + +                  T  GH D V  +A   + ++ +S S D  +  WD 
Sbjct: 278 VKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDK 337

Query: 148 TTGKCVHTMYGHPNFIYSVAAH--------GDLITSGGEDQCVCVYQ 186
            +G  +  + GH N + SVA           ++  +G  D    +++
Sbjct: 338 KSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWK 384

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 59.4 bits (142), Expect = 4e-10
 Identities = 52/279 (18%), Positives = 106/279 (37%), Gaps = 62/279 (22%)

Query: 10  GHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGAKV-------------------- 49
            H+  V  +  + DG  L+   +K+ ++++ +D S  A++                    
Sbjct: 60  DHTSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPS 119

Query: 50  --------------NTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLAN-GIIV 94
                           L + + D   ++W +E+++  + ++ HE  ++ +    +   +V
Sbjct: 120 SDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLV 179

Query: 95  TGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLN--DTDFVSCSNDASIRVWDSTTGKC 152
           +G  D+T+++               D V  +AV         + S D ++RVWDS TG  
Sbjct: 180 SGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFL 239

Query: 153 VHTM-------YGHPNFIYSVAAH--GDLITSGGEDQCVCVY---------------QNK 188
           V  +        GH + +YSV     G  + SG  D+ V ++                  
Sbjct: 240 VERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGT 299

Query: 189 AQNSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSAN 226
            + +++     V +VA   N + I++GS D  V  +   
Sbjct: 300 CEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKK 338

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 42.9 bits (99), Expect = 8e-05
 Identities = 10/73 (13%), Positives = 23/73 (31%)

Query: 112 LKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGD 171
           L     HT  V  +   ND ++++   + + +V+  + G  V  +               
Sbjct: 55  LHKSLDHTSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNT 114

Query: 172 LITSGGEDQCVCV 184
             +   +     V
Sbjct: 115 SSSPSSDLYIRSV 127

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 70.7 bits (171), Expect = 8e-14
 Identities = 33/133 (24%), Positives = 54/133 (40%), Gaps = 7/133 (5%)

Query: 114 TLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVA-AHGDL 172
           TL GH   V       D   ++ ++D  IRV+DS   K +  + GH   ++++  AHG +
Sbjct: 7   TLRGHMTSVITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGI 66

Query: 173 ITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILPNSDI------VTGSSDGIVRVFSAN 226
           + SG  D+ V V+  K      +       V  L   +       VTGS D  + V+   
Sbjct: 67  LVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLP 126

Query: 227 PDRQAEDAVQAQY 239
            +    D  +   
Sbjct: 127 KESSVPDHGEEHD 139

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 57.6 bits (137), Expect = 1e-09
 Identities = 30/119 (25%), Positives = 48/119 (40%), Gaps = 5/119 (4%)

Query: 72  KLTIRQHEMAVWGVIQLANGIIVTGCADKTIKL-HSEEGEFLKTLTGHTDCVRGLAVLND 130
           + T+R H  +V   +Q  +  ++TG  DK I++  S   +FL  L+GH   V  L   + 
Sbjct: 5   RTTLRGHMTSVITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHG 64

Query: 131 TDFVSCSNDASIRVWDSTT----GKCVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVY 185
              VS S D ++RVWD                          +   I +G  D  + V+
Sbjct: 65  GILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVW 123

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 56.4 bits (134), Expect = 3e-09
 Identities = 23/161 (14%), Positives = 55/161 (34%), Gaps = 30/161 (18%)

Query: 6   TALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWC 65
           T L GH   V +  +  +                          N +++ + D   +++ 
Sbjct: 6   TTLRGHMTSVIT-CLQFED-------------------------NYVITGADDKMIRVYD 39

Query: 66  LESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGL 125
             +++  L +  H+  VW +     GI+V+G  D+T+++   +      +    +     
Sbjct: 40  SINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRC 99

Query: 126 AVLNDTDF----VSCSNDASIRVWDSTTGKCVHTMYGHPNF 162
             + +       V+ S D ++ VW       V       ++
Sbjct: 100 LDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDY 140

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 54.9 bits (130), Expect = 1e-08
 Identities = 23/130 (17%), Positives = 50/130 (38%), Gaps = 3/130 (2%)

Query: 57  WDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKTLT 116
            D T +          +   Q   A+ G+++L++  +V+  AD +I+         K   
Sbjct: 221 MDTTIR-IWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSY 279

Query: 117 GHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMY-GHPNFIYSVAAHGD-LIT 174
            HT+           + +   ++    +++  +GK VH       + I+SV   G  L+ 
Sbjct: 280 HHTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKTLVA 339

Query: 175 SGGEDQCVCV 184
           +  +D    +
Sbjct: 340 AVEKDGQSFL 349

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 46.0 bits (107), Expect = 6e-06
 Identities = 49/311 (15%), Positives = 93/311 (29%), Gaps = 64/311 (20%)

Query: 3   KLSTALYGHSMDVRSLSVTPDGCILSAS-------------------------------- 30
           K    L GH   V +L     G ++S S                                
Sbjct: 44  KFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIV 103

Query: 31  ------------RDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQH 78
                       RD +  +W    L   + V                 E+      +R H
Sbjct: 104 EYKNIKYIVTGSRDNTLHVW---KLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGH 160

Query: 79  EMAVWGVIQLANGIIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTDFV-SC 136
             +V  V      I+V+G  D T+ +    + + L  L+GHTD +      ++     S 
Sbjct: 161 MASVRTVSG-HGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISA 219

Query: 137 SNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQNSFMIP 196
           S D +IR+WD   G+ ++T+ GH   +  +      + S   D  +  +     +     
Sbjct: 220 SMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSY 279

Query: 197 AMS--VWAVAILPNSDIVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEI 254
             +          + +I+   S+    +++             +  + V      +  +I
Sbjct: 280 HHTNLSAITTFYVSDNILVSGSENQFNIYN------------LRSGKLVHANILKDADQI 327

Query: 255 GGVKVSDDGIV 265
             V      +V
Sbjct: 328 WSVNFKGKTLV 338

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 44.9 bits (104), Expect = 2e-05
 Identities = 6/93 (6%), Positives = 24/93 (25%), Gaps = 2/93 (2%)

Query: 56  SWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHS-EEGEFLK- 113
           +    +      +   +     H           +  I+   ++    +++   G+ +  
Sbjct: 259 AAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHA 318

Query: 114 TLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWD 146
            +    D +  +     T   +   D    +  
Sbjct: 319 NILKDADQIWSVNFKGKTLVAAVEKDGQSFLEI 351

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 62.9 bits (151), Expect = 3e-11
 Identities = 34/225 (15%), Positives = 69/225 (30%), Gaps = 20/225 (8%)

Query: 6   TALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWC 65
            +    S    S+ ++  G I +   + + ++ + + L P     +  S   +  +    
Sbjct: 178 ESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSV 237

Query: 66  LESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGL 125
             S Q  L    H+   +G I L            ++ + +   +       H+  V  L
Sbjct: 238 KFSPQGSLLAIAHDSNSFGCITLYETEFGERI--GSLSVPTHSSQASLGEFAHSSWVMSL 295

Query: 126 AVLNDTD-FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVA------AHGDLITSGGE 178
           +  +  +   S   D  +R WD  T + + T+  H + I           HGD +   G 
Sbjct: 296 SFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGV 355

Query: 179 DQCVCVYQNKAQNSFMIPAMSVWAVAILPNSDIVTGSSDGIVRVF 223
                           +       +    N  +     D  +R F
Sbjct: 356 FDVK-----------FLKKGWRSGMGADLNESLCCVCLDRSIRWF 389

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 59.1 bits (141), Expect = 6e-10
 Identities = 27/313 (8%), Positives = 81/313 (25%), Gaps = 93/313 (29%)

Query: 6   TALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSP-------------------- 45
            A   H  D+ S+S       +S S D   K+W    L                      
Sbjct: 8   NAGKAHDADIFSVSACNSF-TVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHV 66

Query: 46  ---------GAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEM----------AVWGV- 85
                      ++  + + S+      + +  +     +   ++          + W + 
Sbjct: 67  DVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALK 126

Query: 86  -----IQLANGIIVTGCADKTIKL-------------------HSEEGEFLKTLTGHTDC 121
                 +L +  +V      T  +                     E    +++    +  
Sbjct: 127 WGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQF 186

Query: 122 VRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVA--------AHGDLI 173
              + +       +  N+ ++++ + +T + ++      + I +            G L+
Sbjct: 187 ATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLL 246

Query: 174 TSGGEDQCVCVY-------------------QNKAQNSFMIPAMSVWAVAILPNSD-IVT 213
               +                           ++A       +  V +++   + + + +
Sbjct: 247 AIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCS 306

Query: 214 GSSDGIVRVFSAN 226
              DG +R +   
Sbjct: 307 AGWDGKLRFWDVK 319

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 39.1 bits (89), Expect = 0.001
 Identities = 14/96 (14%), Positives = 28/96 (29%), Gaps = 17/96 (17%)

Query: 152 CVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNK--------------AQNSFMIPA 197
             +    H   I+SV+A      S   D  + V+ NK                +   +  
Sbjct: 6   TANAGKAHDADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHH 65

Query: 198 MSVWAVAILPNSD---IVTGSSDGIVRVFSANPDRQ 230
           + V         +   + T S  G +  +    + +
Sbjct: 66  VDVLQAIERDAFELCLVATTSFSGDLLFYRITREDE 101

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 56.9 bits (135), Expect = 2e-09
 Identities = 13/63 (20%), Positives = 19/63 (30%), Gaps = 2/63 (3%)

Query: 109 GEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHTMY-GHPNFIYSV 166
           G   +   GH   +  L+   D     S   +  I  WD +TG         H   I  +
Sbjct: 2   GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGI 61

Query: 167 AAH 169
              
Sbjct: 62  KTT 64

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 48.1 bits (112), Expect = 1e-06
 Identities = 27/200 (13%), Positives = 53/200 (26%), Gaps = 26/200 (13%)

Query: 3   KLSTALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAK 62
            +    YGH+  + +LS + DG                          TL SA  +    
Sbjct: 3   SIDQVRYGHNKAITALSSSADG-------------------------KTLFSADAEGHIN 37

Query: 63  LWCLESQQCKLTIRQ-HEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKTLTGHTDC 121
            W + +          H   + G+   + G + T   D  +K+    G  + +     + 
Sbjct: 38  SWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANK 97

Query: 122 VRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGDLITSGGEDQC 181
           +    +            A+     +       T          VA   D        Q 
Sbjct: 98  LSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQD 157

Query: 182 VCVYQNKAQNSFMIPAMSVW 201
             V+  K   + +    ++ 
Sbjct: 158 SKVHVYKLSGASVSEVKTIV 177

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 42.7 bits (98), Expect = 7e-05
 Identities = 14/94 (14%), Positives = 28/94 (29%), Gaps = 4/94 (4%)

Query: 57  WDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHS----EEGEFL 112
               +     E                      N  + TG  D ++ + +     +   +
Sbjct: 203 VIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPII 262

Query: 113 KTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWD 146
                    V  +  LN+T  VS   D++I+ W+
Sbjct: 263 IKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWN 296

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 36.9 bits (83), Expect = 0.004
 Identities = 15/83 (18%), Positives = 29/83 (34%), Gaps = 6/83 (7%)

Query: 150 GKCVHTMYGHPNFIYSVAAH--GDLITSGGEDQCVCVYQNKAQNSFMI----PAMSVWAV 203
           G      YGH   I ++++   G  + S   +  +  +      S  +     A  +  +
Sbjct: 2   GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGI 61

Query: 204 AILPNSDIVTGSSDGIVRVFSAN 226
                 D+ T S D  ++V  A 
Sbjct: 62  KTTSKGDLFTVSWDDHLKVVPAG 84

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 55.7 bits (132), Expect = 4e-09
 Identities = 19/93 (20%), Positives = 35/93 (37%), Gaps = 2/93 (2%)

Query: 56  SWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHS--EEGEFLK 113
           S ++    W   + +      +         ++   ++ TG  D  I ++S     + +K
Sbjct: 193 SREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIK 252

Query: 114 TLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWD 146
            L  H D V  L     +  VS   DA I+ W+
Sbjct: 253 ALNAHKDGVNNLLWETPSTLVSSGADACIKRWN 285

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 54.2 bits (128), Expect = 1e-08
 Identities = 21/95 (22%), Positives = 30/95 (31%), Gaps = 8/95 (8%)

Query: 108 EGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVA 167
             E LKT++GH   +  L V      +S S D  I  W S++         H N I S+ 
Sbjct: 2   HDEVLKTISGHNKGITALTV---NPLISGSYDGRIMEWSSSSMHQ-----DHSNLIVSLD 53

Query: 168 AHGDLITSGGEDQCVCVYQNKAQNSFMIPAMSVWA 202
                  S              ++ F        A
Sbjct: 54  NSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASA 88

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 48.4 bits (113), Expect = 9e-07
 Identities = 9/70 (12%), Positives = 25/70 (35%), Gaps = 2/70 (2%)

Query: 118 HTDCVRGLAVLNDTDFVSCSNDASIRVWD-STTGKCVHTMYGHPNFIYSVAAHGD-LITS 175
             +       + +    + S D +I ++      K +  +  H + + ++       + S
Sbjct: 215 PAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPSTLVS 274

Query: 176 GGEDQCVCVY 185
            G D C+  +
Sbjct: 275 SGADACIKRW 284

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 46.5 bits (108), Expect = 4e-06
 Identities = 35/288 (12%), Positives = 84/288 (29%), Gaps = 27/288 (9%)

Query: 3   KLSTALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPG--AKVNTLLSASWDMT 60
           ++   + GH+  + +L+V P   ++S S D     W  + +       + +L ++     
Sbjct: 4   EVLKTISGHNKGITALTVNP---LISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEY 60

Query: 61  AKLWCLESQQCKLTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHSEEGEFLKTLTGH 118
           + +   ++ +     +    +   V    N     V    D  + L S  G+ +K++  +
Sbjct: 61  SSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLN 120

Query: 119 TDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGD------- 171
           +         N         +       S                  ++           
Sbjct: 121 SPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAG 180

Query: 172 ----------LITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILPNSDIVTGSSDGIVR 221
                     L +   +        +K       PA        +    + TGS D  + 
Sbjct: 181 DVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIF 240

Query: 222 VFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFS 269
           ++S     +   A+ A + + V  L       +  V    D  ++ ++
Sbjct: 241 IYSVKRPMKIIKALNA-HKDGVNNLLWETPSTL--VSSGADACIKRWN 285

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.8 bits (130), Expect = 9e-09
 Identities = 22/136 (16%), Positives = 37/136 (27%), Gaps = 4/136 (2%)

Query: 54  SASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLK 113
           +   D T + W L   +                      +  G     +++         
Sbjct: 200 TGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY 259

Query: 114 TLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAH--G 170
            L  H  CV  L        FVS   D  +  W +  G  +       + + S       
Sbjct: 260 QLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQ-SKESSSVLSCDISVDD 318

Query: 171 DLITSGGEDQCVCVYQ 186
             I +G  D+   VY+
Sbjct: 319 KYIVTGSGDKKATVYE 334

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.2 bits (118), Expect = 3e-07
 Identities = 40/242 (16%), Positives = 72/242 (29%), Gaps = 25/242 (10%)

Query: 8   LYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCLE 67
                  +RS  + PDGC L    + S                 L S++    A     +
Sbjct: 93  CLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPD 152

Query: 68  SQQCKLTIRQHEMAVWGVIQ--------------------LANGIIVTGCADKTIKLHSE 107
           S+ C        +AVW +                           + TG  D T++    
Sbjct: 153 SKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDL 212

Query: 108 EGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVA 167
                      T  +  L      ++++   ++S            + ++ H + + S+ 
Sbjct: 213 REGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLK 272

Query: 168 AH--GDLITSGGEDQCVCVYQNKAQNSFMIPAM--SVWAVAILPNSD-IVTGSSDGIVRV 222
               G    S G+D  +  ++     S        SV +  I  +   IVTGS D    V
Sbjct: 273 FAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATV 332

Query: 223 FS 224
           + 
Sbjct: 333 YE 334

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.3 bits (113), Expect = 1e-06
 Identities = 18/100 (18%), Positives = 33/100 (33%), Gaps = 8/100 (8%)

Query: 109 GEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHT-----MYGHPNFI 163
              + TL  H + V  + + N T  V       ++VWD +                 N+I
Sbjct: 42  ARQINTL-NHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYI 100

Query: 164 YSVAAH--GDLITSGGEDQCVCVYQNKAQNSFMIPAMSVW 201
            S      G  +  GGE   + ++   A    +   ++  
Sbjct: 101 RSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSS 140

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.3 bits (87), Expect = 0.002
 Identities = 29/292 (9%), Positives = 75/292 (25%), Gaps = 38/292 (13%)

Query: 10  GHSMDVRSLSVTPDGCILSASRDKSAKLWKPND-----------------------LSPG 46
            H   V +++++     +        K+W  +                        L P 
Sbjct: 49  NHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPD 108

Query: 47  AKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHS 106
                +   +  ++       + + K  +     A + +    +  +   C         
Sbjct: 109 GCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVW 168

Query: 107 EEGEFLKTLTGHTDCVRGLAVLNDTD---FVSCSNDASIRVWDSTTGKCVHTMYGHPNFI 163
           +                   +    D     +   D ++R WD   G+     +   + I
Sbjct: 169 DLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQ-LQQHDFTSQI 227

Query: 164 YSVAAH----GDLITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILPNSD-IVTGSSDG 218
           +S+          +     +  V       +    +    V ++         V+   D 
Sbjct: 228 FSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDN 287

Query: 219 IVRVFSANPDRQAEDAVQAQYAEEVKKLK-SANEQEIGGVKVSDDGIVRVFS 269
           ++  +            Q++ +  V     S +++ I  V  S D    V+ 
Sbjct: 288 LLNAWRTPYGAS---IFQSKESSSVLSCDISVDDKYI--VTGSGDKKATVYE 334

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 51.1 bits (120), Expect = 1e-07
 Identities = 10/60 (16%), Positives = 21/60 (35%), Gaps = 3/60 (5%)

Query: 129 NDTDFVSCSNDASIRVWDSTTGKCVHTMYGH---PNFIYSVAAHGDLITSGGEDQCVCVY 185
           + T   S S D +I++W+  T K   T+       +    +      + S   +  +   
Sbjct: 249 DGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFV 308

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 45.3 bits (105), Expect = 9e-06
 Identities = 10/82 (12%), Positives = 19/82 (23%), Gaps = 2/82 (2%)

Query: 122 VRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAH--GDLITSGGED 179
              L      D +   N  S+      +         H +          G    SG   
Sbjct: 20  AVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVH 79

Query: 180 QCVCVYQNKAQNSFMIPAMSVW 201
             V ++        +   + V+
Sbjct: 80  GNVRIWDTTQTTHILKTTIPVF 101

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 43.4 bits (100), Expect = 4e-05
 Identities = 15/90 (16%), Positives = 27/90 (30%), Gaps = 3/90 (3%)

Query: 60  TAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKL-HSEEGEFLKTLTGH 118
                 +        +                 I +  ADKTIK+ +    +  KT+   
Sbjct: 220 DGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVG 279

Query: 119 TDC-VRGLAVLNDTD-FVSCSNDASIRVWD 146
           T    + L ++      VS S +  I   +
Sbjct: 280 TRIEDQQLGIIWTKQALVSISANGFINFVN 309

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 42.2 bits (97), Expect = 1e-04
 Identities = 27/265 (10%), Positives = 61/265 (23%), Gaps = 41/265 (15%)

Query: 3   KLSTALYGHSMDVRSLSVTPDGCIL-SASRDKSAKLWKPND------------------- 42
             +     HS        +P G    S     + ++W                       
Sbjct: 49  TDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDI 108

Query: 43  -----LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGC 97
                    A V         +        +       R      +   +    I  +  
Sbjct: 109 SWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDD 168

Query: 98  ADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMY 157
               I                          + + F S   D +I +++   G       
Sbjct: 169 NTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFE 228

Query: 158 GHPNFIYSVAAH---------GDLITSGGEDQCVCVYQ---NKAQNSFMIPA-MSVWAVA 204
                  + +           G  I S   D+ + ++     K + +  +   +    + 
Sbjct: 229 DDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLG 288

Query: 205 ILPNSD-IVTGSSDGIVRVFSANPD 228
           I+     +V+ S++G +     NP+
Sbjct: 289 IIWTKQALVSISANGFINFV--NPE 311

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 50.6 bits (119), Expect = 2e-07
 Identities = 9/97 (9%), Positives = 25/97 (25%), Gaps = 7/97 (7%)

Query: 112 LKTLTGHTDCVRGLAVLNDTDF-VSCSNDASIRVWDSTTGKCVHTM---YGHPNFIYSVA 167
           ++      D +  + ++      +  S D S+ V+          +     + + +    
Sbjct: 4   VQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCN 63

Query: 168 AHGD---LITSGGEDQCVCVYQNKAQNSFMIPAMSVW 201
              +    I  G     +         SF     +  
Sbjct: 64  FIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEA 100

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 47.2 bits (110), Expect = 3e-06
 Identities = 15/170 (8%), Positives = 43/170 (25%), Gaps = 24/170 (14%)

Query: 57  WDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLA-----NGIIVTGCADKTIKLHSEEG-- 109
            +   + + L   +      +     + +  +A              D  + +   +   
Sbjct: 168 NNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQG 227

Query: 110 --------------EFLKTLTGHTDCVRGLAVLNDTDFVSC-SNDASIRVWDSTTGKCVH 154
                               T     V  +       F+    +D  I  W+  T K + 
Sbjct: 228 DDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIK 287

Query: 155 TMY-GHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQNSFMIPAMSVWAV 203
                + + +  +A   +++     D            +  + A S++ +
Sbjct: 288 NFAKFNEDSVVKIACSDNILCLATSDDTFKTN-AAIDQTIELNASSIYII 336

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 41.8 bits (96), Expect = 2e-04
 Identities = 12/85 (14%), Positives = 30/85 (35%), Gaps = 3/85 (3%)

Query: 38  WKPNDLSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGC 97
           +  N +    +   L +A  D     W L++++      +        I  ++ I+    
Sbjct: 252 YPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIACSDNILCLAT 311

Query: 98  ADKTIKLHSEEGEFLKTLTGHTDCV 122
           +D T K +       +T+  +   +
Sbjct: 312 SDDTFKTN---AAIDQTIELNASSI 333

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 37.5 bits (85), Expect = 0.003
 Identities = 8/79 (10%), Positives = 21/79 (26%), Gaps = 28/79 (35%)

Query: 10 GHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCLESQ 69
               +  + + P                           + LL  SWD +  ++  + Q
Sbjct: 9  APKDYISDIKIIPSK-------------------------SLLLITSWDGSLTVYKFDIQ 43

Query: 70 QCKLTIRQ---HEMAVWGV 85
             + + Q   ++  +   
Sbjct: 44 AKNVDLLQSLRYKHPLLCC 62

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 49.9 bits (117), Expect = 4e-07
 Identities = 15/91 (16%), Positives = 32/91 (35%), Gaps = 5/91 (5%)

Query: 116 TGHTDCVRGLAVLND-TDFVSCSNDASIRVWDSTTGK--CVHTMYGHPNFIYSVAAH--G 170
           +   + +   A   D T    C N+  + +++ +  K   VH +  H   +  V      
Sbjct: 4   SFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDS 63

Query: 171 DLITSGGEDQCVCVYQNKAQNSFMIPAMSVW 201
           + I + G D+   V+  K +       +   
Sbjct: 64  NRIVTCGTDRNAYVWTLKGRTWKPTLVILRI 94

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 48.7 bits (114), Expect = 1e-06
 Identities = 13/75 (17%), Positives = 25/75 (33%), Gaps = 4/75 (5%)

Query: 92  IIVTGCADKTIKLHSEEG---EFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVWDS 147
            I     +  + ++ + G     +  L  H   V G+    D++  V+C  D +  VW  
Sbjct: 21  QIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTL 80

Query: 148 TTGKCVHTMYGHPNF 162
                  T+      
Sbjct: 81  KGRTWKPTLVILRIN 95

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 46.4 bits (108), Expect = 5e-06
 Identities = 17/159 (10%), Positives = 45/159 (28%), Gaps = 7/159 (4%)

Query: 41  NDLSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCAD 99
           + +   A  + +   S D T  L   + +    T+    + +  V  +    ++  G   
Sbjct: 205 HGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGHDC 264

Query: 100 KTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGH 159
             +    +      +  G  D  +  +    T      N       + +          H
Sbjct: 265 FPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLH 324

Query: 160 PNFIYSVAAHGD------LITSGGEDQCVCVYQNKAQNS 192
            N +  ++             + G D  + ++  ++  S
Sbjct: 325 KNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLES 363

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 44.8 bits (104), Expect = 2e-05
 Identities = 29/264 (10%), Positives = 66/264 (25%), Gaps = 51/264 (19%)

Query: 15  VRSLSVTPDG-CILSASRDKSAKLWKP------------------NDLSPGAKVNTLLSA 55
           +   +   D   I     +    +++                     +      N +++ 
Sbjct: 10  ISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTC 69

Query: 56  SWDMTAKLWCLESQQCKLTIRQH---EMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFL 112
             D  A +W L+ +  K T+        A              G   + I +   E E  
Sbjct: 70  GTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQEND 129

Query: 113 KTLTGHTDCVRGLAVLNDTDFV------SCSNDASIRVWDSTTGK--------------- 151
             +  H        VL+           + S D   R++ +   +               
Sbjct: 130 WWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMP 189

Query: 152 ---CVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVY-----QNKAQNSFMIPAMSVWAV 203
               +        +++ V    +            V      +  A  +     + + AV
Sbjct: 190 FGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAV 249

Query: 204 AILPNSDIVTGSSDGIVRVFSANP 227
             +  S +V    D    +F+ + 
Sbjct: 250 TFITESSLVAAGHDCFPVLFTYDS 273

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 41.8 bits (96), Expect = 2e-04
 Identities = 20/185 (10%), Positives = 51/185 (27%), Gaps = 11/185 (5%)

Query: 53  LSASWDMTAKLWCLESQQCKLTIRQHEMAVWGV-IQLANGIIVTGCADKTIKL-HSEEGE 110
           +      T     +   +           V GV        +     D T+ L  +++  
Sbjct: 175 VEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKM 234

Query: 111 FLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHG 170
            + TL   T  +  +  + ++  V+  +D    ++   +     +  G  +     +  G
Sbjct: 235 AVATLASETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRG 294

Query: 171 D----LITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILPNSD-----IVTGSSDGIVR 221
                   +  +                +   SV  +++L           T   DG + 
Sbjct: 295 LTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMS 354

Query: 222 VFSAN 226
           ++   
Sbjct: 355 IWDVR 359

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 48.3 bits (113), Expect = 1e-06
 Identities = 10/190 (5%), Positives = 41/190 (21%), Gaps = 20/190 (10%)

Query: 56  SWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKL--------HSE 107
                  ++ +E ++      ++           +  +                     E
Sbjct: 156 YVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFE 215

Query: 108 EGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVH-----TMYGHPNF 162
                  +           ++  +            ++  ++   V       +    + 
Sbjct: 216 VVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESS 275

Query: 163 IYSVAAH-----GDLITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILPNSD-IVTGSS 216
           I   +               E   +  Y  K +    +   ++  + +  +   ++    
Sbjct: 276 ILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTEVKN-NLTDLRLSADRKTVMVRKD 334

Query: 217 DGIVRVFSAN 226
           DG +  F   
Sbjct: 335 DGKIYTFPLE 344

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 47.9 bits (112), Expect = 2e-06
 Identities = 8/153 (5%), Positives = 31/153 (20%), Gaps = 23/153 (15%)

Query: 7   ALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCL 66
            +           + P      A       ++                     +      
Sbjct: 222 VIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMY------------------KRSSPINVDP 263

Query: 67  ESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGL 125
              +  + +    +     +                +  +  +    + +T   + +  L
Sbjct: 264 GDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKT---RKVTEVKNNLTDL 320

Query: 126 AVLND-TDFVSCSNDASIRVWDSTTGKCVHTMY 157
            +  D    +   +D  I  +     +   T+ 
Sbjct: 321 RLSADRKTVMVRKDDGKIYTFPLEKPEDERTVE 353

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 41.0 bits (94), Expect = 3e-04
 Identities = 19/313 (6%), Positives = 57/313 (18%), Gaps = 59/313 (18%)

Query: 10  GHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGA--------KVNTLLSASWDMTA 61
              + +R +    D  +      +        D   G              +    +   
Sbjct: 40  PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKF 99

Query: 62  KLWCLESQQCKLTIRQHEMAVWGVIQLANGI----------------------IVTGCAD 99
            +   +  +      +              I                             
Sbjct: 100 AVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQ 159

Query: 100 KTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKC------- 152
                  E  +     T ++         +  +    S  +     D             
Sbjct: 160 AIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSK 219

Query: 153 VHTMYGHPNFIYSVAAHGD---------LITSGGEDQCVCVYQNKAQNSFMIPAMSVWAV 203
              +   P                     +    +               +    S+   
Sbjct: 220 PFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIY 279

Query: 204 AILPNSD----IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLK-SANEQEIGGVK 258
           ++  + +           G++  +        +     +    +  L+ SA+ + +  + 
Sbjct: 280 SVPVHGEFAAYYQGAPEKGVLLKYD------VKTRKVTEVKNNLTDLRLSADRKTV--MV 331

Query: 259 VSDDGIVRVFSAN 271
             DDG +  F   
Sbjct: 332 RKDDGKIYTFPLE 344

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 48.3 bits (113), Expect = 1e-06
 Identities = 16/160 (10%), Positives = 40/160 (25%), Gaps = 2/160 (1%)

Query: 11  HSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCLESQQ 70
                      PD   +    + S  +  P   +    ++     ++        LE+ +
Sbjct: 172 IQSWEAETYAQPDVLAVWNQHESSGVMATP-FYTARKDIDPADPTAYRTGLLTMDLETGE 230

Query: 71  CKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLND 130
             +   +     +    +         A   ++    E                + V  D
Sbjct: 231 MAMREVRIMDVFYFSTAVNPAKTRAFGAYNVLESFDLEKNASIKRVPLPHSYYSVNVSTD 290

Query: 131 TDFV-SCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAH 169
              V        +  +D+ T +    +    N   S+A+ 
Sbjct: 291 GSTVWLGGALGDLAAYDAETLEKKGQVDLPGNASMSLASV 330

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 42.5 bits (98), Expect = 9e-05
 Identities = 10/83 (12%), Positives = 24/83 (28%), Gaps = 5/83 (6%)

Query: 93  IVTGCADKTIKL-HSEEGEFLKTLTGHTDC--VRGLAVLND--TDFVSCSNDASIRVWDS 147
           I+       + +  +E+    K +T            V       + + +   S+   D 
Sbjct: 4   ILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDL 63

Query: 148 TTGKCVHTMYGHPNFIYSVAAHG 170
            TG+ +  +          +  G
Sbjct: 64  VTGETLGRIDLSTPEERVKSLFG 86

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 39.4 bits (90), Expect = 8e-04
 Identities = 13/102 (12%), Positives = 33/102 (32%), Gaps = 4/102 (3%)

Query: 129 NDTDFVSCSNDASIRVWDSTTGKCVHT-MYGHPNFIYSVAAHGDLITSGGEDQCVCVYQN 187
           +       +    +   D  TG+     +     F +S A +     + G    +  +  
Sbjct: 208 DIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGAYNVLESFDL 267

Query: 188 KAQNSFMIPAM--SVWAVAILPNSD-IVTGSSDGIVRVFSAN 226
           +   S     +  S ++V +  +   +  G + G +  + A 
Sbjct: 268 EKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAE 309

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score = 48.2 bits (113), Expect = 1e-06
 Identities = 14/158 (8%), Positives = 39/158 (24%), Gaps = 6/158 (3%)

Query: 3   KLSTALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAK 62
           K + AL   + + +  S             +                    +A       
Sbjct: 174 KYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYL 233

Query: 63  LWCLESQQCKLTI-RQHEMAVWGVIQLANGIIVTGCADKTIKLHS-EEGEFLKTL-TGHT 119
              L++ +             +  ++              +  +  ++ + +K     HT
Sbjct: 234 SVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLNRLAKYDLKQRKLIKAANLDHT 293

Query: 120 DCVRGLAVLNDTDFV-SCSNDASIRVWDSTTGKCVHTM 156
                +A     D +        + V++  T + V  +
Sbjct: 294 --YYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNI 329

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score = 42.0 bits (97), Expect = 1e-04
 Identities = 12/113 (10%), Positives = 23/113 (20%), Gaps = 5/113 (4%)

Query: 77  QHEMAVWGVIQLANGIIVTGCADKTIKL--HSEEGEFLKTLTGHTDCVRGLAVLNDTDFV 134
              +      +       T                   +     T+              
Sbjct: 207 FSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQ 266

Query: 135 SCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVA--AHGDLITSGGEDQCVCVY 185
                  +  +D    K +       +  Y VA    GD +  GG    + V+
Sbjct: 267 IYGVLNRLAKYDLKQRKLIKA-ANLDHTYYCVAFDKKGDKLYLGGTFNDLAVF 318

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score = 39.3 bits (90), Expect = 8e-04
 Identities = 24/293 (8%), Positives = 67/293 (22%), Gaps = 29/293 (9%)

Query: 43  LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIR-QHEMAVWGVIQLANG--IIVTGCAD 99
           L  G +   ++  ++     +  + S     +     +      +   +     V     
Sbjct: 4   LKAGHEY--MIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHY 61

Query: 100 KTIKL-------HSEEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDAS----------- 141
             I         ++               +   A+  D   V  + + +           
Sbjct: 62  GDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKP 121

Query: 142 --IRVWDSTTGKCVHTMYGHPN----FIYSVAAHGDLITSGGEDQCVCVYQNKAQNSFMI 195
             + V+ +  G     +   P     ++   A  G L  +G +   + V   K   +  +
Sbjct: 122 PRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALPL 181

Query: 196 PAMSVWAVAILPNSDIVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIG 255
              +    +           S            R  +D      A+ +    S + +   
Sbjct: 182 RNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGK 241

Query: 256 GVKVSDDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDLP 308
                   +  ++        +          + K      + I    +    
Sbjct: 242 THTQEFADLTELYFTGLRSPKDPNQIYGVLNRLAKYDLKQRKLIKAANLDHTY 294

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score = 39.0 bits (89), Expect = 0.001
 Identities = 14/141 (9%), Positives = 36/141 (25%), Gaps = 6/141 (4%)

Query: 124 GLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHTM-YGHPNFIYSVAAHGD---LITSGGE 178
           G A+    +  +  +   ++ V D  +     +          +     D          
Sbjct: 1   GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNH 60

Query: 179 DQCVCVYQNKAQNSFMIPAMSVWAVAILPNSDIVTGSSDGIVRVFSANPDRQAEDAVQAQ 238
              +         +     +S     +  +      S DG   V++     Q  +     
Sbjct: 61  YGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGK-EVYATVNPTQRLNDHYVV 119

Query: 239 YAEEVKKLKSANEQEIGGVKV 259
               ++   +A+  E   V+ 
Sbjct: 120 KPPRLEVFSTADGLEAKPVRT 140

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score = 37.8 bits (86), Expect = 0.003
 Identities = 14/177 (7%), Positives = 36/177 (20%), Gaps = 21/177 (11%)

Query: 55  ASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKT 114
                      +++ +  + +        G             + +              
Sbjct: 159 YVAGPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRH------------- 205

Query: 115 LTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCV-HTMYGHPNFIYSVAAHGD-- 171
                         +  D  +          D  TGK             ++        
Sbjct: 206 -EFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDP 264

Query: 172 --LITSGGEDQCVCVYQNKAQNSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSA 225
             +           + Q K   +  +   + + VA     D +  G +   + VF+ 
Sbjct: 265 NQIYGVLNRLAKYDLKQRKLIKAANLDH-TYYCVAFDKKGDKLYLGGTFNDLAVFNP 320

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 47.6 bits (111), Expect = 2e-06
 Identities = 17/62 (27%), Positives = 23/62 (37%), Gaps = 5/62 (8%)

Query: 129 NDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA-----HGDLITSGGEDQCVC 183
           +   F +   DA+IRVWD TT KCV         + +            I S   D  + 
Sbjct: 262 DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLN 321

Query: 184 VY 185
            Y
Sbjct: 322 FY 323

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 46.8 bits (109), Expect = 4e-06
 Identities = 11/95 (11%), Positives = 30/95 (31%), Gaps = 5/95 (5%)

Query: 57  WDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHS-EEGEFLKTL 115
                       +  +      +  ++ +  L +    T  AD TI++      + ++  
Sbjct: 230 ISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKW 289

Query: 116 TGHTDCVRGLAV----LNDTDFVSCSNDASIRVWD 146
           T     +    V      +   +S S D ++  ++
Sbjct: 290 TLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYE 324

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 42.6 bits (98), Expect = 9e-05
 Identities = 11/59 (18%), Positives = 23/59 (38%), Gaps = 4/59 (6%)

Query: 50  NTLLSASWDMTAKLWCLESQQCKLTIRQHEMAV----WGVIQLANGIIVTGCADKTIKL 104
               +   D T ++W + + +C       +  +     GV+   NG I++   D T+  
Sbjct: 264 QKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNF 322

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 44.4 bits (103), Expect = 2e-05
 Identities = 14/154 (9%), Positives = 48/154 (31%), Gaps = 6/154 (3%)

Query: 21  TPDGCILSASRDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEM 80
              G ++  +          +  S  AK    + A  +             ++   +   
Sbjct: 204 QKAGRLVWPTYTGKIHQI--DLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALD 261

Query: 81  AVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTD---FVSCS 137
            ++ ++   +       +   + L ++ GE L       + +  + V  D     +   +
Sbjct: 262 RIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHE-IDSINVSQDEKPLLYALST 320

Query: 138 NDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGD 171
            D ++ + D+ +G+ + ++    +    +     
Sbjct: 321 GDKTLYIHDAESGEELRSVNQLGHGPQVITTADM 354

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Length = 301

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

 Score = 43.7 bits (101), Expect = 3e-05
 Identities = 21/120 (17%), Positives = 37/120 (30%), Gaps = 9/120 (7%)

Query: 57  WDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKTLT 116
             +   +        K+      +AV      A    V    +    + +   +    + 
Sbjct: 182 ISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIP 241

Query: 117 GHTDCVRGLAVLNDTD--FVSCSNDASIRVWDSTTGKCVHTM------YGHPNFIYSVAA 168
              D   G+AV  D    +V+ S   ++ V D+ T     TM      Y    FI S+  
Sbjct: 242 VGPD-PAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATMAVGKNPYASGQFIGSIPV 300

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Length = 301

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

 Score = 40.2 bits (92), Expect = 5e-04
 Identities = 10/56 (17%), Positives = 19/56 (33%), Gaps = 4/56 (7%)

Query: 133 FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGD---LITSGGEDQCVCVY 185
           +++ S   +I V D T+ K   T+    N         D   +  +      V + 
Sbjct: 5   YIANSESDNISVIDVTSNKVTATIPVGSN-PMGAVISPDGTKVYVANAHSNDVSII 59

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Length = 301

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

 Score = 39.1 bits (89), Expect = 0.001
 Identities = 8/111 (7%), Positives = 31/111 (27%), Gaps = 4/111 (3%)

Query: 94  VTGCADKTIKL-HSEEGEFLKTLTGHTDCVRGLAVLNDTD--FVSCSNDASIRVWDSTTG 150
           +       I +      +   T+   ++   G  +  D    +V+ ++   + + D+ T 
Sbjct: 6   IANSESDNISVIDVTSNKVTATIPVGSN-PMGAVISPDGTKVYVANAHSNDVSIIDTATN 64

Query: 151 KCVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQNSFMIPAMSVW 201
             + T+    +      +               +      ++ +   +   
Sbjct: 65  NVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG 115

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} Length = 333

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

 Score = 38.3 bits (87), Expect = 0.002
 Identities = 10/81 (12%), Positives = 22/81 (27%), Gaps = 5/81 (6%)

Query: 92  IIVTGCADKTIK---LHSEEGEFLKTLTGHTDCVRGLAVLND--TDFVSCSNDASIRVWD 146
           + +     + I    L+ E    L  +      V+ + V  D    +V    +  +  + 
Sbjct: 6   VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYR 65

Query: 147 STTGKCVHTMYGHPNFIYSVA 167
                   T         S+ 
Sbjct: 66  IAPDDGALTFAAESALPGSLT 86

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} Length = 432

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

 Score = 37.5 bits (86), Expect = 0.004
 Identities = 12/155 (7%), Positives = 37/155 (23%), Gaps = 15/155 (9%)

Query: 133 FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAH--GDLITSGGEDQCVCVYQNKAQ 190
            V+  +   I + D +T +    +      ++       G  +   G D  V +     +
Sbjct: 35  SVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMK 93

Query: 191 NSFMI--------PAMSVWAVAILPNSD--IVTGSSDGIVRVFSANPDRQAEDAVQAQYA 240
               +              +          I          +   + +      +Q+   
Sbjct: 94  EPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIM--DGETLEPKKIQSTRG 151

Query: 241 EEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQ 275
               + +   E  +  +  S      + +     +
Sbjct: 152 MTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGK 186

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	557
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	100.0
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	100.0
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	100.0
d1tbga_	340	beta1-subunit of the signal-transducing G protein	100.0
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	99.98
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	99.97
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	99.97
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	99.97
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	99.97
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	99.97
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	99.96
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	99.96
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	99.96
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	99.96
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	99.95
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	99.95
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	99.95
d1tbga_	340	beta1-subunit of the signal-transducing G protein	99.95
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	99.95
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	99.94
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	99.93
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	99.93
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	99.92
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	99.91
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	99.88
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	99.86
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	99.85
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.81
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.8
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.77
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.75
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	99.73
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	99.67
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	99.61
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	99.6
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.58
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	99.56
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.54
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	99.49
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	99.48
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	99.48
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	99.42
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	99.32
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	99.32
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	99.04
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	98.97
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	98.87
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	98.55
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	98.55
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	98.53
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	98.46
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	98.41
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	98.41
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	98.38
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	98.3
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	98.27
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	98.21
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	98.14
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	98.12
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	98.01
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	97.99
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	97.79
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	97.78
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	97.62
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	97.51
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	97.32
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	96.78
d1npea_	263	Nidogen {Mouse (Mus musculus) [TaxId: 10090]}	95.69
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	95.62
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	95.41
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	95.06
d1npea_	263	Nidogen {Mouse (Mus musculus) [TaxId: 10090]}	94.09
d1ijqa1	266	Low density lipoprotein (LDL) receptor {Human (Hom	92.06
d1k3ia3	387	Galactose oxidase, central domain {Fungi (Fusarium	90.21
d1utca2	327	Clathrin heavy-chain terminal domain {Rat (Rattus	89.17
d1w6sa_	596	Methanol dehydrogenase, heavy chain {Methylobacter	88.9
d2ad6a1	571	Methanol dehydrogenase, heavy chain {Methylophilus	88.89
d1v04a_	340	Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory	87.87
d1kv9a2	560	Quinoprotein alcohol dehydrogenase, N-terminal dom	87.02
d1ijqa1	266	Low density lipoprotein (LDL) receptor {Human (Hom	85.73
d1kb0a2	573	Quinoprotein alcohol dehydrogenase, N-terminal dom	85.39
d1kv9a2	560	Quinoprotein alcohol dehydrogenase, N-terminal dom	85.21
d2ad6a1	571	Methanol dehydrogenase, heavy chain {Methylophilus	84.39
d1xipa_	381	Nucleoporin NUP159 {Baker's yeast (Saccharomyces c	84.36
d1utca2	327	Clathrin heavy-chain terminal domain {Rat (Rattus	83.11
d1flga_	582	Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax	82.03
d1k3ia3	387	Galactose oxidase, central domain {Fungi (Fusarium	81.04
d1h6la_	353	Thermostable phytase (3-phytase) {Bacillus amyloli	80.27

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-34  Score=289.61  Aligned_cols=261  Identities=16%  Similarity=0.250  Sum_probs=226.4

Q ss_pred             EEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC---------------------CCCCCCCCEEEEEECCCe
Q psy7057           3 KLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND---------------------LSPGAKVNTLLSASWDMT   60 (557)
Q Consensus         3 kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~---------------------~~~~~~~~~l~sgs~Dg~   60 (557)
                      +.+++| +|...|+|++|+|+|+ |+||+ ||+|+|||+..                     +++++++++|++|+.|++
T Consensus        43 ~~~~~~-~H~~~V~~v~fs~~g~~latg~-dg~V~iWd~~~~~~~~~~~~~~~~~h~~~I~~v~~s~dg~~l~s~~~dg~  120 (337)
T d1gxra_          43 RQINTL-NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEAST  120 (337)
T ss_dssp             EEEEEE-CCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSE
T ss_pred             eEEEEC-CCCCcEEEEEECCCCCEEEEEE-CCEEEEEEccCCcccceeEEeeecCCCCcEEEEEEcCCCCEEEEeecccc
Confidence            455566 7999999999999999 66765 89999999864                     577889999999999999


Q ss_pred             EEEEECCCC--eEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe-EEE
Q psy7057          61 AKLWCLESQ--QCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD-FVS  135 (557)
Q Consensus        61 i~iwd~~~~--~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs  135 (557)
                      |++||+...  +....+..|...+.+++++|++ .+++++.|+.|++|+ .++++.....+|...|.++++++++. +++
T Consensus       121 i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~~~~  200 (337)
T d1gxra_         121 LSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWT  200 (337)
T ss_dssp             EEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            999998754  5667788899999999999988 999999999999999 56677788889999999999999876 779


Q ss_pred             EECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC--ceEeeCCccEEEEEEcCCCc-
Q psy7057         136 CSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ--NSFMIPAMSVWAVAILPNSD-  210 (557)
Q Consensus       136 ~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~--~~~~~~~~~v~~v~~~p~g~-  210 (557)
                      ++.|+.|++||+++++.+..+. |...|.++++  +++.|++++.|+.+++||.+..  .....|...|.+++|+|+++ 
T Consensus       201 ~~~d~~v~i~d~~~~~~~~~~~-~~~~i~~l~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~i~~v~~s~~g~~  279 (337)
T d1gxra_         201 GGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKW  279 (337)
T ss_dssp             EETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEECCCSSCEEEEEECTTSSE
T ss_pred             ccccccccccccccceeecccc-cccceEEEEEcccccccceeccccccccccccccccccccccccccceEEECCCCCE
Confidence            9999999999999999888775 8899999999  6779999999999999998766  45566788999999999998 


Q ss_pred             EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEec
Q psy7057         211 IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSA  270 (557)
Q Consensus       211 l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~  270 (557)
                      |++++.||.|++|++..++....   ..+...+..+.+.+... .++++|.||+|+||++
T Consensus       280 l~s~s~Dg~i~iwd~~~~~~~~~---~~~~~~v~~~~~s~d~~-~l~t~s~D~~I~vWdl  335 (337)
T d1gxra_         280 FVSTGKDNLLNAWRTPYGASIFQ---SKESSSVLSCDISVDDK-YIVTGSGDKKATVYEV  335 (337)
T ss_dssp             EEEEETTSEEEEEETTTCCEEEE---EECSSCEEEEEECTTSC-EEEEEETTSCEEEEEE
T ss_pred             EEEEeCCCeEEEEECCCCCEEEE---ccCCCCEEEEEEeCCCC-EEEEEeCCCeEEEEEE
Confidence            88999999999999988776533   23567788888876654 5899999999999986

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=5.8e-33  Score=272.58  Aligned_cols=262  Identities=28%  Similarity=0.384  Sum_probs=233.9

Q ss_pred             EEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEECC
Q psy7057           5 STALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCLE   67 (557)
Q Consensus         5 ~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~~   67 (557)
                      ..+|+||++.|++|+|+|++. |+||+.||+|+|||+.+                +.+++++..+++++.++++.+|+..
T Consensus        10 ~~~L~GH~~~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (317)
T d1vyhc1          10 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ   89 (317)
T ss_dssp             SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETT
T ss_pred             cEEEcCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCcEEEEeeeccccccccccccccccccccc
Confidence            357999999999999999998 88999999999999876                5667889999999999999999999


Q ss_pred             CCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEEE
Q psy7057          68 SQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRV  144 (557)
Q Consensus        68 ~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~v  144 (557)
                      ..+....+..|...+.++.+++++ .+++++.|+.+++|| .++..+..+.+|...+.++++++++. |++++.|+.|++
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~~  169 (317)
T d1vyhc1          90 GFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRV  169 (317)
T ss_dssp             SSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred             ccccccccccccccceeeeccCCCceEEeeccCcceeEeecccceeeeEEccCCCcceeeecccCCCEEEEEeCCCeEEE
Confidence            999888899999999999999988 999999999999999 56788899999999999999999976 679999999999


Q ss_pred             EECCCCeEEEEEeCCCCcEEEEEEc----------------------CCEEEEEeCCCeEEEEECCCC---ceEeeCCcc
Q psy7057         145 WDSTTGKCVHTMYGHPNFIYSVAAH----------------------GDLITSGGEDQCVCVYQNKAQ---NSFMIPAMS  199 (557)
Q Consensus       145 wd~~~~~~~~~~~~h~~~V~~l~~~----------------------~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~  199 (557)
                      |++.+++.+..+.+|...+.++++.                      +..+++++.|+.|++|+..+.   ..+..|...
T Consensus       170 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~  249 (317)
T d1vyhc1         170 WVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW  249 (317)
T ss_dssp             EETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSC
T ss_pred             EeeccceeeEEEecCCCCceEEEEeeccccceeeccccceeeeeccCCceeEeccCCCEEEEEECCCCcEEEEEeCCCCC
Confidence            9999999999999999999888762                      347899999999999998776   566778899


Q ss_pred             EEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEe
Q psy7057         200 VWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFS  269 (557)
Q Consensus       200 v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~  269 (557)
                      |.+++++|+++ |++|+.||.|++||+.+++...  ....|...|..+.+.+... .+++++.||+|+||+
T Consensus       250 v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~--~~~~h~~~V~~~~~s~~~~-~l~s~s~Dg~i~iWd  317 (317)
T d1vyhc1         250 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMK--TLNAHEHFVTSLDFHKTAP-YVVTGSVDQTVKVWE  317 (317)
T ss_dssp             EEEEEECSSSSCEEEEETTTEEEEECCTTSCCCE--EEECCSSCEEEEEECSSSS-CEEEEETTSEEEEEC
T ss_pred             EEEEEECCCCCEEEEEECCCeEEEEECCCCcEEE--EEcCCCCCEEEEEEcCCCC-EEEEEeCCCeEEEeC
Confidence            99999999998 8899999999999998876543  3345778899998877655 588999999999996

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.5e-32  Score=279.01  Aligned_cols=260  Identities=22%  Similarity=0.316  Sum_probs=213.3

Q ss_pred             ccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------------------------CCCCCCCCEEE
Q psy7057           9 YGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------------------------LSPGAKVNTLL   53 (557)
Q Consensus         9 ~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------------------------~~~~~~~~~l~   53 (557)
                      .+|++.|+||+|+|||+ |++| .|++|+|||+.+                                  +++++++++|+
T Consensus        59 ~~H~~~V~~l~fs~dg~~lasg-~d~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~  137 (388)
T d1erja_          59 LDHTSVVCCVKFSNDGEYLATG-CNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLA  137 (388)
T ss_dssp             EECSSCCCEEEECTTSSEEEEE-CBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEE
T ss_pred             CCCCCcEEEEEECCCCCEEEEE-eCCeEEEEEecccceEeeecccccccccccccccccccCCCCCEEEEEECCCCCcce
Confidence            36999999999999999 5666 599999999864                                  45778899999


Q ss_pred             EEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcEEEEEeCCCCCEEEEEEeC-CC
Q psy7057          54 SASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLN-DT  131 (557)
Q Consensus        54 sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~-~~  131 (557)
                      +|+.|++|++|+...++.+..+.+|...|.++.+++++ .+++++.++.+++||...........+.....++.+.+ ++
T Consensus       138 s~~~dg~v~i~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (388)
T d1erja_         138 TGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDG  217 (388)
T ss_dssp             EEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTTC
T ss_pred             ecccccccccccccccccccccccccccccccccccccccccccccceeeeeeeccccccccccccccccccccccCCCC
Confidence            99999999999999999999999999999999999988 89999999999999965544433333445555566655 45


Q ss_pred             e-EEEEECCCeEEEEECCCCeEEEEE-------eCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC-----------
Q psy7057         132 D-FVSCSNDASIRVWDSTTGKCVHTM-------YGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ-----------  190 (557)
Q Consensus       132 ~-lvs~s~Dg~I~vwd~~~~~~~~~~-------~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~-----------  190 (557)
                      . |++++.|+.|++||++++..+..+       .+|...|.++++  ++.+|++++.|+.|++||+...           
T Consensus       218 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~  297 (388)
T d1erja_         218 KYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNS  297 (388)
T ss_dssp             CEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC--------------
T ss_pred             CeEEEEcCCCeEEEeecccCccceeeccccccccCCCCCEEEEEECCCCCEEEEEECCCcEEEEeccCCccccccccccc
Confidence            5 779999999999999998877665       358889999999  6789999999999999996533           


Q ss_pred             ----ceEeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccC-----CCceeEEEEe
Q psy7057         191 ----NSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSAN-----EQEIGGVKVS  260 (557)
Q Consensus       191 ----~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~-----~~~~~~vs~s  260 (557)
                          .....|...|.+++|+|+++ |++|+.||.|++||+.++++..  ....|...+..+.+..     .+...++|||
T Consensus       298 ~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~--~l~~H~~~V~~~~~~~~~~~spd~~~l~s~s  375 (388)
T d1erja_         298 GTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLL--MLQGHRNSVISVAVANGSSLGPEYNVFATGS  375 (388)
T ss_dssp             -CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEE--EEECCSSCEEEEEECSSCTTCTTCEEEEEEE
T ss_pred             cceeeecccccceEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEE--EEeCCCCCEEEEEEecCcccCCCCCEEEEEe
Confidence                22345677899999999998 8899999999999999877653  3445777787776432     3456789999


Q ss_pred             CCCcEEEEecC
Q psy7057         261 DDGIVRVFSAN  271 (557)
Q Consensus       261 ~DG~IrvW~~~  271 (557)
                      .||+||||+++
T Consensus       376 ~Dg~I~iW~~~  386 (388)
T d1erja_         376 GDCKARIWKYK  386 (388)
T ss_dssp             TTSEEEEEEEE
T ss_pred             CCCEEEEEeee
Confidence            99999999974

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=1.9e-31  Score=265.86  Aligned_cols=265  Identities=23%  Similarity=0.314  Sum_probs=228.3

Q ss_pred             cEEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEE
Q psy7057           2 YKLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLW   64 (557)
Q Consensus         2 ~kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iw   64 (557)
                      ++..++|+||.+.|++|+|+|++. |+||+.||+|+|||+.+                +++++++.++++|+.|+.+++|
T Consensus        45 ~~~~~tL~GH~~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~d~~i~~~  124 (340)
T d1tbga_          45 MRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIY  124 (340)
T ss_dssp             CCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEEECSCSCEEEEEECTTSSEEEEEETTCCEEEE
T ss_pred             eeeeEEECCCCCCEEEEEECCCCCEEEEEECCCceeeeecccceeEEEEecccccEEeeEeeccceeeeeecccceeecc
Confidence            467899999999999999999998 89999999999999877                6678899999999999999999


Q ss_pred             ECCCC----eEEEEEcccCCcEEEEEEcCCCEEEEEECCCeEEEEeC-CCcEEEEEeCCCCCEEEEEEeCCCe-EEEEEC
Q psy7057          65 CLESQ----QCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSE-EGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSN  138 (557)
Q Consensus        65 d~~~~----~~~~~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~-~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~  138 (557)
                      +....    .....+.+|.....+.....+..+.....+.....+.. ..........+...+....+.+... +++++.
T Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (340)
T d1tbga_         125 NLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGAC  204 (340)
T ss_dssp             ESSSSCSCCCEEEEECCCSSCEEEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred             cccccccccccceecccccccccccccccccccccccccccccccccccccccccccccceeEeeeccccccceeEEeec
Confidence            97654    46677888998888888877888999999999999884 4455566677888899999988765 679999


Q ss_pred             CCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCCceE-----eeCCccEEEEEEcCCCc-
Q psy7057         139 DASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQNSF-----MIPAMSVWAVAILPNSD-  210 (557)
Q Consensus       139 Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~~~~-----~~~~~~v~~v~~~p~g~-  210 (557)
                      |+.|++||+++++++.++.+|...|.++++  ++++|++|+.|+.|++|+.+....+     ..+...|.+++|+|++. 
T Consensus       205 d~~v~i~d~~~~~~~~~~~~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~  284 (340)
T d1tbga_         205 DASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRL  284 (340)
T ss_dssp             TTEEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECSSSCE
T ss_pred             CceEEEEECCCCcEEEEEeCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeecccccccccccccccCceEEEEECCCCCE
Confidence            999999999999999999999999999999  6779999999999999998876332     23456799999999998 


Q ss_pred             EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEe
Q psy7057         211 IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFS  269 (557)
Q Consensus       211 l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~  269 (557)
                      |++|+.||.|++||+.+.+...  ...+|...|..+.+.+... .+++||.||.|+||+
T Consensus       285 l~~g~~dg~i~iwd~~~~~~~~--~~~~H~~~V~~l~~s~d~~-~l~s~s~Dg~v~iWd  340 (340)
T d1tbga_         285 LLAGYDDFNCNVWDALKADRAG--VLAGHDNRVSCLGVTDDGM-AVATGSWDSFLKIWN  340 (340)
T ss_dssp             EEEEETTSCEEEEETTTCCEEE--EECCCSSCEEEEEECTTSS-CEEEEETTSCEEEEC
T ss_pred             EEEEECCCEEEEEECCCCcEEE--EEcCCCCCEEEEEEeCCCC-EEEEEccCCEEEEeC
Confidence            8899999999999998876543  3345778899998877655 589999999999996

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=1.3e-31  Score=264.36  Aligned_cols=263  Identities=21%  Similarity=0.279  Sum_probs=205.5

Q ss_pred             EEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC-----------------CCCCCCCCEEEEEECCCeEEEE
Q psy7057           3 KLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND-----------------LSPGAKVNTLLSASWDMTAKLW   64 (557)
Q Consensus         3 kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~-----------------~~~~~~~~~l~sgs~Dg~i~iw   64 (557)
                      ++.++++||.+.|++|+|+|+++ |+||+.||+|++||+.+                 +.+++++. +++++.|+++++|
T Consensus         3 ~~~~~~~GH~~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~h~~~v~~v~~~~~g~-~~~~~~d~~v~~~   81 (299)
T d1nr0a2           3 SIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGD-LFTVSWDDHLKVV   81 (299)
T ss_dssp             EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSC-EEEEETTTEEEEE
T ss_pred             ccceEcCCCCCCcEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCCcEEEEEeeccce-eecccceeeEEEe
Confidence            57899999999999999999998 88999999999999876                 44556654 6778889999999


Q ss_pred             ECCCCe---EEEEEcccCCcEEEEEEcCCCEEEEEECCCeEEEEeCCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCC
Q psy7057          65 CLESQQ---CKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDA  140 (557)
Q Consensus        65 d~~~~~---~~~~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg  140 (557)
                      +.....   .......+...+.++++++++.+++++.++.+++|+.. +.....  ....+.+++++|++. +++++.|+
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~i~~~~~~-~~~~~~--~~~~~~~~~~s~~~~~l~~g~~dg  158 (299)
T d1nr0a2          82 PAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHG-KLTEVP--ISYNSSCVALSNDKQFVAVGGQDS  158 (299)
T ss_dssp             CSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETT-EEEEEE--CSSCEEEEEECTTSCEEEEEETTS
T ss_pred             ccCCccccccccccccccccccccccccccccccccccccccccccc-cccccc--cccccccccccccccccccccccc
Confidence            976532   11223457788999999999966666677899999843 333333  345688999999976 66999999


Q ss_pred             eEEEEECCCCeEEE-EEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC------ceEeeCCccEEEEEEcCCCc-
Q psy7057         141 SIRVWDSTTGKCVH-TMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ------NSFMIPAMSVWAVAILPNSD-  210 (557)
Q Consensus       141 ~I~vwd~~~~~~~~-~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~------~~~~~~~~~v~~v~~~p~g~-  210 (557)
                      .|++||+++++... ....|...|.++++  ++.+|++++.|+.|++||....      ..+..|...|++++|+|++. 
T Consensus       159 ~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~  238 (299)
T d1nr0a2         159 KVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVR  238 (299)
T ss_dssp             EEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSE
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            99999998877554 34568999999999  6779999999999999996543      34456788999999999998 


Q ss_pred             EEEEEcCCcEEEEecCCCCcchhHHHh-cccceeEEEeccCCCceeEEEEeCCCcEEEEecC
Q psy7057         211 IVTGSSDGIVRVFSANPDRQAEDAVQA-QYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSAN  271 (557)
Q Consensus       211 l~sg~~Dg~I~iwd~~~~~~~~~~~~~-~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~  271 (557)
                      |++|+.||.|++|++............ .+...+..+.+.+ + ..++++|.||+||+|++.
T Consensus       239 l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~-~~l~s~s~D~~i~iWdl~  298 (299)
T d1nr0a2         239 LATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLN-E-TTIVSAGQDSNIKFWNVP  298 (299)
T ss_dssp             EEEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEEEE-T-TEEEEEETTSCEEEEECC
T ss_pred             eEEEcCCCEEEEEECCCCCcceEEEecCCCCCcEEEEEECC-C-CEEEEEeCCCEEEEEecc
Confidence            889999999999999876544322222 2334455555433 2 358999999999999974

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=8.2e-32  Score=269.72  Aligned_cols=257  Identities=16%  Similarity=0.191  Sum_probs=211.2

Q ss_pred             CcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEECCCCe--E
Q psy7057          11 HSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCLESQQ--C   71 (557)
Q Consensus        11 H~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~--~   71 (557)
                      +.+.+.+++++|+|. |+.+ .++.|.+|++.+                ++++|++++|++|+.|++|++||+.+++  .
T Consensus        16 ~r~~~~~~a~~~~g~~l~~~-~~~~v~i~~~~~~~~~~~~~~H~~~v~~~~~sp~g~~latg~~dg~i~iwd~~~~~~~~   94 (311)
T d1nr0a1          16 ARGTAVVLGNTPAGDKIQYC-NGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHIL   94 (311)
T ss_dssp             CTTCCCCCEECTTSSEEEEE-ETTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCE
T ss_pred             CCCCeEEEEEcCCCCEEEEE-eCCEEEEEECCCCceeEEEcCCCCCEEEEEEeCCCCeEeccccCceEeeeeeecccccc
Confidence            455677899999998 5555 577899999976                5678899999999999999999998875  3


Q ss_pred             EEEEcccCCcEEEEEEcCCC-EEEEEEC--CCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe--EEEEECCCeEEEE
Q psy7057          72 KLTIRQHEMAVWGVIQLANG-IIVTGCA--DKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD--FVSCSNDASIRVW  145 (557)
Q Consensus        72 ~~~l~~h~~~V~~l~~~~~~-~l~sgs~--dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~--lvs~s~Dg~I~vw  145 (557)
                      ...+..|...|.+++|+|++ .|++++.  +..+++|+ ..++....+.+|...|++++|+|++.  |++|+.|++|++|
T Consensus        95 ~~~~~~~~~~v~~v~~s~d~~~l~~~~~~~~~~~~v~~~~~~~~~~~l~~h~~~v~~v~~~~~~~~~l~sgs~d~~i~i~  174 (311)
T d1nr0a1          95 KTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIF  174 (311)
T ss_dssp             EEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEE
T ss_pred             ccccccccCccccccccccccccccccccccccccccccccccccccccccccccccccccccceeeecccccccccccc
Confidence            45688899999999999998 7888875  45699999 55677788899999999999999865  6789999999999


Q ss_pred             ECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCCce----------EeeCCccEEEEEEcCCCc-EE
Q psy7057         146 DSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQNS----------FMIPAMSVWAVAILPNSD-IV  212 (557)
Q Consensus       146 d~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~~~----------~~~~~~~v~~v~~~p~g~-l~  212 (557)
                      |++++++...+..|...|+++.+  ++++|++++.|+.|++||......          ...|...|++++|+|+++ |+
T Consensus       175 d~~~~~~~~~~~~~~~~i~~v~~~p~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~  254 (311)
T d1nr0a1         175 EGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIA  254 (311)
T ss_dssp             ETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEE
T ss_pred             cccccccccccccccccccccccCccccccccccccccccccccccccccccccccccccccccccccccccCCCCCEEE
Confidence            99999999999999999999999  678999999999999999765421          234677899999999998 88


Q ss_pred             EEEcCCcEEEEecCCCCcchhHHH-hcccceeEEEeccCCCceeEEEEeCCCcEEEEecC
Q psy7057         213 TGSSDGIVRVFSANPDRQAEDAVQ-AQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSAN  271 (557)
Q Consensus       213 sg~~Dg~I~iwd~~~~~~~~~~~~-~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~  271 (557)
                      +|+.||+|+|||+++++....... ......+..+.+.   ...+++++.||.|++|+.+
T Consensus       255 tgs~Dg~v~iwd~~t~~~~~~l~~~~~~~~~~~~~~~~---~~~l~s~s~dG~i~~wd~d  311 (311)
T d1nr0a1         255 SASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWT---KQALVSISANGFINFVNPE  311 (311)
T ss_dssp             EEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEEC---SSCEEEEETTCCEEEEETT
T ss_pred             EEeCCCeEEEEECCCCcEEEEEECCCCccceEEEEEec---CCEEEEEECCCEEEEEeCC
Confidence            999999999999998876532211 1122233334332   3358999999999999964

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.98  E-value=6e-31  Score=269.38  Aligned_cols=261  Identities=13%  Similarity=0.184  Sum_probs=208.4

Q ss_pred             CcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC------------------CCCCCCCCEEEEEECCCeEEEEECCCCeE
Q psy7057          11 HSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND------------------LSPGAKVNTLLSASWDMTAKLWCLESQQC   71 (557)
Q Consensus        11 H~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~------------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~   71 (557)
                      +.++|+|++|+|+|+ |++|+.|+.|+|||...                  +.++|++++|++|+.|++|++||+.++..
T Consensus         6 ~~~pIt~~~~s~dg~~la~~~~~~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~~~   85 (371)
T d1k8kc_           6 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTW   85 (371)
T ss_dssp             CSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEE
T ss_pred             CCCCeEEEEECCCCCEEEEEeCCCEEEEEECCCCCEEEEEEecCCCCCEEEEEECCCCCEEEEEECCCeEEEEeeccccc
Confidence            457899999999998 88999999999999864                  67788999999999999999999987754


Q ss_pred             --EEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCC--Cc---EEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeE
Q psy7057          72 --KLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEE--GE---FLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASI  142 (557)
Q Consensus        72 --~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~--~~---~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I  142 (557)
                        ...+.+|...|.+++|+|++ .|++|+.|+++++|+..  ..   .......|...|.+++|+|++. |++|+.|++|
T Consensus        86 ~~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~D~~v  165 (371)
T d1k8kc_          86 KPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKC  165 (371)
T ss_dssp             EEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCE
T ss_pred             ccccccccccccccccccccccccceeecccCcceeeeeecccccccccccccccccccccccccccccceeccccCcEE
Confidence              44567789999999999998 99999999999999822  21   2344567999999999999976 7799999999


Q ss_pred             EEEECCC------------------CeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC---ceEeeCCcc
Q psy7057         143 RVWDSTT------------------GKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ---NSFMIPAMS  199 (557)
Q Consensus       143 ~vwd~~~------------------~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~  199 (557)
                      ++|++..                  ++.+....+|...|.+++|  ++++|++++.|++|++||....   ..+..|..+
T Consensus       166 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~  245 (371)
T d1k8kc_         166 RIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLP  245 (371)
T ss_dssp             EEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCC
T ss_pred             EEEeeccCccccccccccccccccceeeeeeccCccCcEEEEEeecccccccccccCCcceEEeeecccceeeeeccccc
Confidence            9999753                  2466777889999999999  6789999999999999997655   566778889


Q ss_pred             EEEEEEcCCCcEEEEEcCCcEEEEecCCCCcc----------hhH-----------H------------------Hhccc
Q psy7057         200 VWAVAILPNSDIVTGSSDGIVRVFSANPDRQA----------EDA-----------V------------------QAQYA  240 (557)
Q Consensus       200 v~~v~~~p~g~l~sg~~Dg~I~iwd~~~~~~~----------~~~-----------~------------------~~~~~  240 (557)
                      |.+++|+|++.+++++.|+.+++|..+.....          ...           .                  ...|.
T Consensus       246 v~s~~fs~d~~~la~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~  325 (371)
T d1k8kc_         246 LLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHK  325 (371)
T ss_dssp             EEEEEEEETTEEEEEETTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSS
T ss_pred             ceeeeecCCCCEEEEEcCCceEEEEeeCCCceEEEeeeecCccccccccccceeeEecccceeEEeccccccceeccccc
Confidence            99999999999888888998888765432100          000           0                  01144


Q ss_pred             ceeEEEeccCCC---ceeEEEEeCCCcEEEEecC
Q psy7057         241 EEVKKLKSANEQ---EIGGVKVSDDGIVRVFSAN  271 (557)
Q Consensus       241 ~~v~~l~~~~~~---~~~~vs~s~DG~IrvW~~~  271 (557)
                      ..+..+...+..   ...++|++.||.||||+++
T Consensus       326 ~~I~~i~~~~~~~~~~~~~~T~g~Dg~v~iW~~~  359 (371)
T d1k8kc_         326 NSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVR  359 (371)
T ss_dssp             SCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHH
T ss_pred             CCEEEEEEeCCCCcceEEEEEEcCCCeEEEEeCC
Confidence            556666554332   2346899999999999964

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.97  E-value=2.7e-30  Score=258.52  Aligned_cols=223  Identities=14%  Similarity=0.249  Sum_probs=191.5

Q ss_pred             EEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC------------------CCCCCCCCEEEEEEC--CCeE
Q psy7057           3 KLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND------------------LSPGAKVNTLLSASW--DMTA   61 (557)
Q Consensus         3 kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~------------------~~~~~~~~~l~sgs~--Dg~i   61 (557)
                      ++.+.+.+|.+.|++++|+|+|+ |++|+.||+|+|||+..                  +.+++++.+|++++.  +..+
T Consensus        49 ~~~~~~~~H~~~v~~~~~sp~g~~latg~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~v~~s~d~~~l~~~~~~~~~~~  128 (311)
T d1nr0a1          49 TDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFG  128 (311)
T ss_dssp             SCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSE
T ss_pred             ceeEEEcCCCCCEEEEEEeCCCCeEeccccCceEeeeeeeccccccccccccccCccccccccccccccccccccccccc
Confidence            34567899999999999999998 88999999999999876                  667888999999986  4669


Q ss_pred             EEEECCCCeEEEEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEE
Q psy7057          62 KLWCLESQQCKLTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCS  137 (557)
Q Consensus        62 ~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s  137 (557)
                      ++|++++++...++.+|...|.+++|+|++  .+++|+.|+.|++|| .+++....+..|...|+++.++|++. +++++
T Consensus       129 ~v~~~~~~~~~~~l~~h~~~v~~v~~~~~~~~~l~sgs~d~~i~i~d~~~~~~~~~~~~~~~~i~~v~~~p~~~~l~~~~  208 (311)
T d1nr0a1         129 HVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTG  208 (311)
T ss_dssp             EEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred             cccccccccccccccccccccccccccccceeeecccccccccccccccccccccccccccccccccccCcccccccccc
Confidence            999999999999999999999999999987  689999999999999 45677888889999999999999977 66999


Q ss_pred             CCCeEEEEECCCCeEEEEEe-------CCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC---ceEeeCC---ccEEE
Q psy7057         138 NDASIRVWDSTTGKCVHTMY-------GHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ---NSFMIPA---MSVWA  202 (557)
Q Consensus       138 ~Dg~I~vwd~~~~~~~~~~~-------~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~---~~v~~  202 (557)
                      .|+.|++||+++++.+..+.       +|...|.+++|  ++++|++|+.|++|++||..+.   +.+..+.   ..+.+
T Consensus       209 ~d~~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~tgs~Dg~v~iwd~~t~~~~~~l~~~~~~~~~~~~  288 (311)
T d1nr0a1         209 GDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLG  288 (311)
T ss_dssp             TTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEE
T ss_pred             ccccccccccccccccccccccccccccccccccccccCCCCCEEEEEeCCCeEEEEECCCCcEEEEEECCCCccceEEE
Confidence            99999999999998887764       57889999999  6789999999999999998776   3444443   23445


Q ss_pred             EEEcCCCcEEEEEcCCcEEEEecC
Q psy7057         203 VAILPNSDIVTGSSDGIVRVFSAN  226 (557)
Q Consensus       203 v~~~p~g~l~sg~~Dg~I~iwd~~  226 (557)
                      +.++++. +++++.||.|++||.+
T Consensus       289 ~~~~~~~-l~s~s~dG~i~~wd~d  311 (311)
T d1nr0a1         289 IIWTKQA-LVSISANGFINFVNPE  311 (311)
T ss_dssp             EEECSSC-EEEEETTCCEEEEETT
T ss_pred             EEecCCE-EEEEECCCEEEEEeCC
Confidence            5554432 9999999999999964

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=1.5e-29  Score=252.48  Aligned_cols=264  Identities=20%  Similarity=0.326  Sum_probs=213.7

Q ss_pred             cEEEEEeccCcccEEEEEEcCCCcEEEEECCCcEEEEcCCC------------------CCCCCCCCEEEEEECCCeEEE
Q psy7057           2 YKLSTALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPND------------------LSPGAKVNTLLSASWDMTAKL   63 (557)
Q Consensus         2 ~kl~~~l~gH~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~------------------~~~~~~~~~l~sgs~Dg~i~i   63 (557)
                      .++.++|.+|.+.|++|+|+|++.|++|+.|++|++|+...                  ..+.+++..+++++.|++|++
T Consensus        43 ~~~~~~l~~H~~~V~~l~~s~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~i  122 (355)
T d1nexb2          43 KKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHV  122 (355)
T ss_dssp             TEEEEEEECCSSCEEEEEEETTTEEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEEEEETTEEEEEEEETTSEEEE
T ss_pred             CcEEEEEECCCCCEEEEEEcCCCEEEEEecccccccccccccccccccccccccccccccccccccceeeeecCCCcEEE
Confidence            46789999999999999999988899999999999999877                  234456788999999999999


Q ss_pred             EECCCCeEEEE-----------------------EcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCC
Q psy7057          64 WCLESQQCKLT-----------------------IRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGH  118 (557)
Q Consensus        64 wd~~~~~~~~~-----------------------l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h  118 (557)
                      |++.+......                       ...|...+.+.  .+++ .+++++.|+.|++|| .+++.+....++
T Consensus       123 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~  200 (355)
T d1nexb2         123 WKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGH  200 (355)
T ss_dssp             EECCC-----------CCCEEESCTTTCTTEEEEEECCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCC
T ss_pred             EEccCCceeccccccceeccceeccccccceeeeeeecccccccc--ccccceeeeecccceeeeeecccccceeeeecc
Confidence            99987543322                       22234444433  3344 899999999999999 567778888899


Q ss_pred             CCCEEEEEEeCCCe-EEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEEcCCEEEEEeCCCeEEEEECCCC-ceEeeC
Q psy7057         119 TDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQ-NSFMIP  196 (557)
Q Consensus       119 ~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~~-~~~~~~  196 (557)
                      ...+.++.+++.+. +++++.|++|++||++++.++..+.+|...|.++++++++|++++.||+|++||+++. +.+..|
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~  280 (355)
T d1nexb2         201 TDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYH  280 (355)
T ss_dssp             SSCEEEEEEETTTTEEEEEETTSCEEEEETTTCCEEEEECCCSSCCCEEEECSSEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred             ccccccccccccceeeecccccceEEeeeccccccccccccccccccccccccceeeeeecccccccccccccceecccc
Confidence            99999999999866 7799999999999999999999999999999999999999999999999999998877 666677


Q ss_pred             CccEEEEE-EcCCCcEEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEec
Q psy7057         197 AMSVWAVA-ILPNSDIVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSA  270 (557)
Q Consensus       197 ~~~v~~v~-~~p~g~l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~  270 (557)
                      ...+.+++ +++++.+++++.|+.|+|||+++++.... ....+...+..+.+.+.  ..+++++.||.++||.+
T Consensus       281 ~~~~~~~~~~~~~~~~l~~g~d~~i~vwd~~tg~~~~~-~~~~~~~~V~~v~~~~~--~~~~~~s~dg~~~l~~~  352 (355)
T d1nexb2         281 HTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHA-NILKDADQIWSVNFKGK--TLVAAVEKDGQSFLEIL  352 (355)
T ss_dssp             CTTCCCCCEEEECSSEEEEEETTEEEEEETTTCCBCCS-CTTTTCSEEEEEEEETT--EEEEEEESSSCEEEEEE
T ss_pred             cCCceEEEEEcCCCCEEEEEeCCEEEEEECCCCCEEEE-EecCCCCCEEEEEEcCC--eEEEEEECCCcEEEEEE
Confidence            76666654 56677788888899999999998876532 23456778888887653  45678899999777654

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=6.8e-29  Score=250.17  Aligned_cols=217  Identities=19%  Similarity=0.253  Sum_probs=193.0

Q ss_pred             EeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC------------------CCCCCCCCEEEEEECCCeEEEEECC
Q psy7057           7 ALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND------------------LSPGAKVNTLLSASWDMTAKLWCLE   67 (557)
Q Consensus         7 ~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~------------------~~~~~~~~~l~sgs~Dg~i~iwd~~   67 (557)
                      ...+|.+.|++++|+|+++ |++|+.||+|++||+..                  +.+++++..+++++.|+.+++|++.
T Consensus        92 ~~~~h~~~I~~v~~s~dg~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~~~~  171 (337)
T d1gxra_          92 DCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLH  171 (337)
T ss_dssp             ECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred             eecCCCCcEEEEEEcCCCCEEEEeeccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            4568999999999999998 88999999999999875                  4577889999999999999999999


Q ss_pred             CCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeC-CCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEEE
Q psy7057          68 SQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSE-EGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRV  144 (557)
Q Consensus        68 ~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~-~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~v  144 (557)
                      ++++......|...|.+++|++++ .+++++.|+.+++||. +++.+..+ .|...|.+++++|++. +++++.|+.|++
T Consensus       172 ~~~~~~~~~~~~~~v~~l~~s~~~~~~~~~~~d~~v~i~d~~~~~~~~~~-~~~~~i~~l~~~~~~~~l~~~~~d~~i~i  250 (337)
T d1gxra_         172 NQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQH-DFTSQIFSLGYCPTGEWLAVGMESSNVEV  250 (337)
T ss_dssp             TTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE-ECSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccceeeccc-ccccceEEEEEcccccccceecccccccc
Confidence            999999999999999999999988 9999999999999994 55655555 4889999999999976 679999999999


Q ss_pred             EECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCCc--eEeeCCccEEEEEEcCCCc-EEEEEcCCc
Q psy7057         145 WDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQN--SFMIPAMSVWAVAILPNSD-IVTGSSDGI  219 (557)
Q Consensus       145 wd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~~--~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~  219 (557)
                      ||+++++.. ....|...|.+++|  ++++|++++.|++|++||..+.+  ....|...|++++|+|+++ |++|+.||+
T Consensus       251 ~d~~~~~~~-~~~~~~~~i~~v~~s~~g~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~s~D~~  329 (337)
T d1gxra_         251 LHVNKPDKY-QLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKK  329 (337)
T ss_dssp             EETTSSCEE-EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSC
T ss_pred             ccccccccc-cccccccccceEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEccCCCCEEEEEEeCCCCEEEEEeCCCe
Confidence            999988765 45679999999999  67899999999999999987662  3345778999999999998 889999999


Q ss_pred             EEEEec
Q psy7057         220 VRVFSA  225 (557)
Q Consensus       220 I~iwd~  225 (557)
                      |+|||+
T Consensus       330 I~vWdl  335 (337)
T d1gxra_         330 ATVYEV  335 (337)
T ss_dssp             EEEEEE
T ss_pred             EEEEEE
Confidence            999986

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.97  E-value=2.2e-28  Score=239.54  Aligned_cols=222  Identities=27%  Similarity=0.425  Sum_probs=202.7

Q ss_pred             EEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEE
Q psy7057           3 KLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWC   65 (557)
Q Consensus         3 kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd   65 (557)
                      ++.++|.+|.+.|++++|+|++. +++++.++.+.+|+...                +.+.++++.+++++.|+.+++|+
T Consensus        50 ~~~~~~~~h~~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~  129 (317)
T d1vyhc1          50 DFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWE  129 (317)
T ss_dssp             CCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEE
T ss_pred             CEEEEEeCCCCcEEEEeeecccccccccccccccccccccccccccccccccccceeeeccCCCceEEeeccCcceeEee
Confidence            45678999999999999999998 88999999999998776                45567789999999999999999


Q ss_pred             CCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCC------------
Q psy7057          66 LESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDT------------  131 (557)
Q Consensus        66 ~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~------------  131 (557)
                      +.+++....+.+|...+.++++++++ .|++++.|+.|++|+ ..+..+..+.+|...+.++.++|+.            
T Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  209 (317)
T d1vyhc1         130 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSE  209 (317)
T ss_dssp             TTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC
T ss_pred             cccceeeeEEccCCCcceeeecccCCCEEEEEeCCCeEEEEeeccceeeEEEecCCCCceEEEEeeccccceeeccccce
Confidence            99999999999999999999999988 999999999999999 5677888999999999999997642            


Q ss_pred             ---------eEEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC---ceEeeCC
Q psy7057         132 ---------DFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ---NSFMIPA  197 (557)
Q Consensus       132 ---------~lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~  197 (557)
                               .+++++.|+.|++||+++++++.++.+|...|.++++  ++++|++++.||.|++||+.+.   ..+..|.
T Consensus       210 ~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~  289 (317)
T d1vyhc1         210 TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHE  289 (317)
T ss_dssp             -------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCS
T ss_pred             eeeeccCCceeEeccCCCEEEEEECCCCcEEEEEeCCCCCEEEEEECCCCCEEEEEECCCeEEEEECCCCcEEEEEcCCC
Confidence                     2669999999999999999999999999999999999  6779999999999999997655   6778899


Q ss_pred             ccEEEEEEcCCCc-EEEEEcCCcEEEEe
Q psy7057         198 MSVWAVAILPNSD-IVTGSSDGIVRVFS  224 (557)
Q Consensus       198 ~~v~~v~~~p~g~-l~sg~~Dg~I~iwd  224 (557)
                      ..|++++|+|+++ |++|+.||+|+|||
T Consensus       290 ~~V~~~~~s~~~~~l~s~s~Dg~i~iWd  317 (317)
T d1vyhc1         290 HFVTSLDFHKTAPYVVTGSVDQTVKVWE  317 (317)
T ss_dssp             SCEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred             CCEEEEEEcCCCCEEEEEeCCCeEEEeC
Confidence            9999999999998 99999999999996

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.2e-28  Score=242.56  Aligned_cols=267  Identities=27%  Similarity=0.386  Sum_probs=205.5

Q ss_pred             CcEEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEE
Q psy7057           1 MYKLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKL   63 (557)
Q Consensus         1 ~~kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~i   63 (557)
                      .++..++|+||++.|.+ +++++|+ |+|||.||+|+|||+.+                +.++  +++|++|+.|+++++
T Consensus         5 ~~~~~~~l~GH~~~V~s-~~~~~g~~l~sgs~Dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~~--~~~l~s~s~D~~~~~   81 (342)
T d2ovrb2           5 ELKSPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKV   81 (342)
T ss_dssp             CCCCCEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEE
T ss_pred             CCCcCEEECCcCCceEE-EEEECCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCCEEEEEeC--CCccccceecccccc
Confidence            36778899999999865 3566777 99999999999999976                2333  468999999999999


Q ss_pred             EECCCCeEEEEEcccCCcEEEEE---------------------------------------EcCCCEEEEEECCCeEEE
Q psy7057          64 WCLESQQCKLTIRQHEMAVWGVI---------------------------------------QLANGIIVTGCADKTIKL  104 (557)
Q Consensus        64 wd~~~~~~~~~l~~h~~~V~~l~---------------------------------------~~~~~~l~sgs~dg~I~v  104 (557)
                      |+............+...+....                                       ......+++++.|+.|++
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~  161 (342)
T d2ovrb2          82 WNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKV  161 (342)
T ss_dssp             EETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTSCEEE
T ss_pred             cccccccceecccccceeEeeeecccccccccccceeEEEeecccccceeeeecccccceeeccccceeeeecCCCeEEE
Confidence            99887654444333332222111                                       111236788899999999


Q ss_pred             Ee-CCCcEEEEEeCCCCCEEEEEEeCCCeEEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEEcCCEEEEEeCCCeEE
Q psy7057         105 HS-EEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHGDLITSGGEDQCVC  183 (557)
Q Consensus       105 wd-~~~~~~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~l~s~s~Dg~I~  183 (557)
                      || .....+..+.+|...+..+.+. ...+++++.|++|++||++.++++..+.+|...+.++++++++|++++.|+.|+
T Consensus       162 ~d~~~~~~~~~~~~~~~~~~~~~~~-~~~l~s~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~s~d~~i~  240 (342)
T d2ovrb2         162 WDPETETCLHTLQGHTNRVYSLQFD-GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVK  240 (342)
T ss_dssp             EEGGGTEEEEEECCCSSCEEEEEEC-SSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEETTEEEEEETTSCEE
T ss_pred             eecccceeeEEEcCcccccccccCC-CCEEEEEeCCCeEEEeecccceeeeEecccccceeEEecCCCEEEEEcCCCEEE
Confidence            99 5567788888998888877664 245889999999999999999999999999999999999999999999999999


Q ss_pred             EEECCCC---ceEee---CCccEEEEEEcCCCcEEEEEcCCcEEEEecCCCCcchhH---HHhcccceeEEEeccCCCce
Q psy7057         184 VYQNKAQ---NSFMI---PAMSVWAVAILPNSDIVTGSSDGIVRVFSANPDRQAEDA---VQAQYAEEVKKLKSANEQEI  254 (557)
Q Consensus       184 iwd~~~~---~~~~~---~~~~v~~v~~~p~g~l~sg~~Dg~I~iwd~~~~~~~~~~---~~~~~~~~v~~l~~~~~~~~  254 (557)
                      +||....   ..+..   |...+.++.++++ .+++|+.||+|++||+++++.....   ....+...+..+.+.+. ..
T Consensus       241 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~s~Dg~i~iwd~~tg~~i~~~~~~~~~~~~~~v~~v~~s~~-~~  318 (342)
T d2ovrb2         241 IWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN-FVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNT-KL  318 (342)
T ss_dssp             EEETTTCCEEEEECSTTSCSSCEEEEEECSS-EEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSS-EE
T ss_pred             EEecccccccccccccceeeeceeecccCCC-eeEEEcCCCEEEEEECCCCCEEEEEecccCCCCCCCEEEEEECCC-CC
Confidence            9997665   23332   4456777777543 3889999999999999988764322   22356677888888765 45


Q ss_pred             eEEEEeCCCc----EEEEecCCC
Q psy7057         255 GGVKVSDDGI----VRVFSANPD  273 (557)
Q Consensus       255 ~~vs~s~DG~----IrvW~~~~~  273 (557)
                      .+++|+.||+    |++||++.+
T Consensus       319 ~la~g~~dGt~~~~l~~~Df~~~  341 (342)
T d2ovrb2         319 VCAVGSRNGTEETKLLVLDFDVD  341 (342)
T ss_dssp             EEEEECSSSSSCCEEEEEECCCC
T ss_pred             EEEEEeCCCCCeeEEEEEeCCCC
Confidence            6789999985    999998754

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.96  E-value=9.3e-28  Score=241.06  Aligned_cols=257  Identities=13%  Similarity=0.135  Sum_probs=193.7

Q ss_pred             cEEEEEEcCCCc-EEEEECCC-cEEEEcCCC-------------------CCCC--CCCCEEEEEECCCeEEEEECCCCe
Q psy7057          14 DVRSLSVTPDGC-ILSASRDK-SAKLWKPND-------------------LSPG--AKVNTLLSASWDMTAKLWCLESQQ   70 (557)
Q Consensus        14 ~V~~l~~spdg~-l~sgs~Dg-~V~iWd~~~-------------------~~~~--~~~~~l~sgs~Dg~i~iwd~~~~~   70 (557)
                      .+++++|+|++. |+.++.+. .|+.|+...                   ++++  .++.+|++|+.||+|+|||+..++
T Consensus        19 ~~t~l~~~~~~~~la~~~~~~~~i~~~~~~~~~~~~~~~~~gh~~~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd~~~~~   98 (325)
T d1pgua1          19 FTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDK   98 (325)
T ss_dssp             CCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEG
T ss_pred             CeEEEEECCCCCEEEEEeCCCEEEEEEeCCCCCccceEEEeCCCCCCEEEEEEeeCCCCCEEEEEeCCCCEEEeeecCCc
Confidence            567899999998 76666554 467776433                   3344  467899999999999999986532


Q ss_pred             --------EEEEEcccCCcEEEEEEcCCC-EEEEEEC--CCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe--EEEE
Q psy7057          71 --------CKLTIRQHEMAVWGVIQLANG-IIVTGCA--DKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD--FVSC  136 (557)
Q Consensus        71 --------~~~~l~~h~~~V~~l~~~~~~-~l~sgs~--dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~--lvs~  136 (557)
                              ....+..|..+|.+++|++++ .+++++.  ++.+++|+ .+++++..+.+|...|.+++|+|++.  ++++
T Consensus        99 ~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~  178 (325)
T d1pgua1          99 ESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTV  178 (325)
T ss_dssp             GGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEE
T ss_pred             ceeeeecccccccccccCcEEEEEECCCCCccceeeccccceEEEEeecccccceeeeecccccccccccccccceEEEe
Confidence                    223456789999999999998 6666554  67799998 56788999999999999999999864  6689


Q ss_pred             ECCCeEEEEECCCCeEEEEEe---CCCCcEEEEEEc---CCEEEEEeCCCeEEEEECCCC---ceEeeCCccEEEEEEc-
Q psy7057         137 SNDASIRVWDSTTGKCVHTMY---GHPNFIYSVAAH---GDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVAIL-  206 (557)
Q Consensus       137 s~Dg~I~vwd~~~~~~~~~~~---~h~~~V~~l~~~---~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~-  206 (557)
                      +.|+.|++||+...+....+.   .|...|.+++|+   +.+|++++.|+.|++||.++.   ..+..|...+.++.|+ 
T Consensus       179 ~~d~~v~~~d~~~~~~~~~~~~~~~~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~~~~~~~~l~~~~~~v~~~~~s~  258 (325)
T d1pgua1         179 GDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFAL  258 (325)
T ss_dssp             ETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEE
T ss_pred             ecccccccccccccccceecccccCCCCccEEeeeccccceeccccccccceeeeeeccccccccccccccccccceeee
Confidence            999999999998888776664   467789999993   568999999999999998766   4555566655444443 


Q ss_pred             --CCCc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEec
Q psy7057         207 --PNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSA  270 (557)
Q Consensus       207 --p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~  270 (557)
                        |+++ |++++.|+.|+|||+.+++.........+......+.+.......++++|.||.|+||++
T Consensus       259 ~~~dg~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~dg~i~vwdl  325 (325)
T d1pgua1         259 SWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYEL  325 (325)
T ss_dssp             EESSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEET
T ss_pred             eccCCCEEEEEeCCCeEEEEECCCCCEEEEEEecCCcccCeEEEEEECCCCEEEEEECCCEEEEEEC
Confidence              5665 999999999999999987765433333332223333333333335799999999999985

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=9.8e-27  Score=225.29  Aligned_cols=257  Identities=24%  Similarity=0.327  Sum_probs=201.6

Q ss_pred             EEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC--------------CCCCCCCCEEEEEECCCeEEEEECCC
Q psy7057           4 LSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND--------------LSPGAKVNTLLSASWDMTAKLWCLES   68 (557)
Q Consensus         4 l~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~--------------~~~~~~~~~l~sgs~Dg~i~iwd~~~   68 (557)
                      .++.+.+|...|+|++|  |++ |+||+.||+|+|||+.+              .+...++++|++|+.|++|++|++..
T Consensus         7 ~i~~~~~~~~~V~c~~~--d~~~l~sgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~v~~~~~~l~s~s~D~~i~~~~~~~   84 (293)
T d1p22a2           7 RIHCRSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNT   84 (293)
T ss_dssp             CEECCCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEESSS
T ss_pred             EEeccCCCCCCEEEEEE--cCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEeeeecccceeeccccccccccccccc
Confidence            34556788899999765  666 99999999999999976              22334688999999999999999999


Q ss_pred             CeEEEEEcccCCcEEEEEEcCCCEEEEEECCCeEEEEeCC----CcEEEEEeCCCCCEEEEEEeCCCeEEEEECCCeEEE
Q psy7057          69 QQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEE----GEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRV  144 (557)
Q Consensus        69 ~~~~~~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~~----~~~~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~I~v  144 (557)
                      +........+.....+ .....+.++++..++.+++|+..    ......+..|...|.++.+.+ ..+++++.|+.|++
T Consensus        85 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~s~d~~i~~  162 (293)
T d1p22a2          85 GEMLNTLIHHCEAVLH-LRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD-KYIVSASGDRTIKV  162 (293)
T ss_dssp             CCEEEEECCCCSCEEE-EECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEET-TEEEEEETTSEEEE
T ss_pred             cccccccccccccccc-ccccccceeecccccceeEeeccccccccccccccccccccccceecc-cccccccCCCceee
Confidence            9888777766555443 33445589999999999999933    234566778999999888765 44778999999999


Q ss_pred             EECCCCeEEEEEeCCCCcEEEEEEcCCEEEEEeCCCeEEEEECCCC---ceEeeCCccEEEEEEcCCCc-EEEEEcCCcE
Q psy7057         145 WDSTTGKCVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVAILPNSD-IVTGSSDGIV  220 (557)
Q Consensus       145 wd~~~~~~~~~~~~h~~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I  220 (557)
                      ||+++++++..+.+|...+..+.+++..+++++.|++|++||+++.   .....+...+..  +.+++. |++++.||.|
T Consensus       163 ~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~--~~~~~~~l~sg~~dg~i  240 (293)
T d1p22a2         163 WNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRC--IRFDNKRIVSGAYDGKI  240 (293)
T ss_dssp             EETTTCCEEEEEECCSSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEE--EECCSSEEEEEETTSCE
T ss_pred             ecCCCCcEEEEEcccccccccccCCCCeEEEecCCCEEEEEecccceeeeeecccceeeee--ccccceEEEEEcCCCEE
Confidence            9999999999999999999999999999999999999999998776   334445555654  445555 8999999999


Q ss_pred             EEEecCCCCcc-------hhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEe
Q psy7057         221 RVFSANPDRQA-------EDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFS  269 (557)
Q Consensus       221 ~iwd~~~~~~~-------~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~  269 (557)
                      ++|++......       .......|...|..+.+.   +..++|+|.||+|||||
T Consensus       241 ~iwd~~~~~~~~~~~~~~~~~~~~~H~~~V~~v~~d---~~~l~s~s~Dg~i~iWD  293 (293)
T d1p22a2         241 KVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFD---EFQIVSSSHDDTILIWD  293 (293)
T ss_dssp             EEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEEC---SSCEEECCSSSEEEEEC
T ss_pred             EEEECCCCccccccCCceeeEEecCCCCCEEEEEEc---CCEEEEEecCCEEEEeC
Confidence            99997543221       112234566677777663   34689999999999997

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.96  E-value=5.7e-27  Score=239.46  Aligned_cols=225  Identities=17%  Similarity=0.268  Sum_probs=185.3

Q ss_pred             cEEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC------------------CCCCCCCCEEEEEECCCeEE
Q psy7057           2 YKLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND------------------LSPGAKVNTLLSASWDMTAK   62 (557)
Q Consensus         2 ~kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~------------------~~~~~~~~~l~sgs~Dg~i~   62 (557)
                      ++....|++|.++|++|+|+|+++ |++|+.|++|+|||+.+                  +.++|+++.|++|+.|++++
T Consensus        41 ~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~  120 (371)
T d1k8kc_          41 WVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVIS  120 (371)
T ss_dssp             EEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEE
T ss_pred             EEEEEEecCCCCCEEEEEECCCCCEEEEEECCCeEEEEeecccccccccccccccccccccccccccccceeecccCcce
Confidence            456788999999999999999998 88999999999999865                  56788999999999999999


Q ss_pred             EEECCCCe----EEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCC-------------------CcEEEEEeCC
Q psy7057          63 LWCLESQQ----CKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEE-------------------GEFLKTLTGH  118 (557)
Q Consensus        63 iwd~~~~~----~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~-------------------~~~~~~l~~h  118 (557)
                      +|++....    .......|...|.+++|+|++ .|++|+.|++|++|+..                   +..+....+|
T Consensus       121 i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~D~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (371)
T d1k8kc_         121 ICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSS  200 (371)
T ss_dssp             EEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCC
T ss_pred             eeeeecccccccccccccccccccccccccccccceeccccCcEEEEEeeccCccccccccccccccccceeeeeeccCc
Confidence            99987653    234456789999999999998 99999999999999832                   2356667789


Q ss_pred             CCCEEEEEEeCCCe-EEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEE--CCCC-ce
Q psy7057         119 TDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQ--NKAQ-NS  192 (557)
Q Consensus       119 ~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd--~~~~-~~  192 (557)
                      ...|.+++|+|++. +++++.|++|++||+.+++++..+..|..+|.+++|  ++. +++++.|+.+++|.  .... ..
T Consensus       201 ~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~s~~fs~d~~-~la~g~d~~~~~~~~~~~~~~~~  279 (371)
T d1k8kc_         201 CGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESS-LVAAGHDCFPVLFTYDSAAGKLS  279 (371)
T ss_dssp             SSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTE-EEEEETTSSCEEEEEETTTTEEE
T ss_pred             cCcEEEEEeecccccccccccCCcceEEeeecccceeeeecccccceeeeecCCCC-EEEEEcCCceEEEEeeCCCceEE
Confidence            99999999999976 779999999999999999999999999999999999  444 55556677776664  2111 00


Q ss_pred             E-----------------------------------------eeCCccEEEEEEcCCCc-----EEEEEcCCcEEEEecC
Q psy7057         193 F-----------------------------------------MIPAMSVWAVAILPNSD-----IVTGSSDGIVRVFSAN  226 (557)
Q Consensus       193 ~-----------------------------------------~~~~~~v~~v~~~p~g~-----l~sg~~Dg~I~iwd~~  226 (557)
                      +                                         ..|...|.++++++.+.     |+|+|.||.|+||+++
T Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~I~~i~~~~~~~~~~~~~~T~g~Dg~v~iW~~~  359 (371)
T d1k8kc_         280 FGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVR  359 (371)
T ss_dssp             ECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHH
T ss_pred             EeeeecCccccccccccceeeEecccceeEEeccccccceecccccCCEEEEEEeCCCCcceEEEEEEcCCCeEEEEeCC
Confidence            0                                         12566799999987542     7899999999999985


Q ss_pred             C
Q psy7057         227 P  227 (557)
Q Consensus       227 ~  227 (557)
                      +
T Consensus       360 ~  360 (371)
T d1k8kc_         360 S  360 (371)
T ss_dssp             H
T ss_pred             c
Confidence            4

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.96  E-value=2.5e-27  Score=232.14  Aligned_cols=253  Identities=15%  Similarity=0.199  Sum_probs=196.5

Q ss_pred             cEEEEEeccCcccEEEEEEcCCCcEEEEECCCcEEEEcCCC-----------CCCCCCCCEEEEEECCCeEEEEECCCCe
Q psy7057           2 YKLSTALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPND-----------LSPGAKVNTLLSASWDMTAKLWCLESQQ   70 (557)
Q Consensus         2 ~kl~~~l~gH~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~-----------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~   70 (557)
                      .+++++|+||.++|++|+|+|   |+||+.||+|++||+.+           +.+. .+..+++++.|+++++|++... 
T Consensus         3 ~~~i~~l~gH~~~I~~l~~s~---l~sgs~Dg~v~~Wd~~~~~~~h~~~V~~~~~~-~~~~~~s~s~D~~v~~w~~~~~-   77 (287)
T d1pgua2           3 DEVLKTISGHNKGITALTVNP---LISGSYDGRIMEWSSSSMHQDHSNLIVSLDNS-KAQEYSSISWDDTLKVNGITKH-   77 (287)
T ss_dssp             EEEEEEECCCSSCEEEEETTT---TEEEETTSCEEETTTTEEECCCCSCEEEEECC-STTCCEEEETTTEEEETTEEEE-
T ss_pred             cceeEEECCCCCceEEEEECc---EEEEeCCCeEEEEECCCCCCCCCCCEEEEEec-CCCeEEEEeecccccccccccc-
Confidence            478999999999999999987   99999999999999876           3344 3567899999999999986432 


Q ss_pred             EEEEEcccCCcEEEEEEcCCCEEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCeEEEEECC-CeEEEEECC
Q psy7057          71 CKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSND-ASIRVWDST  148 (557)
Q Consensus        71 ~~~~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~lvs~s~D-g~I~vwd~~  148 (557)
                            .....+.++.+.+++.++..+.++.+.+|+ ..+..+..+..+ ..+.++.... ..+++++.+ +.+++|++.
T Consensus        78 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~v~~~~~~~v~~~~~~  149 (287)
T d1pgua2          78 ------EFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLN-SPGSAVSLSQ-NYVAVGLEEGNTIQVFKLS  149 (287)
T ss_dssp             ------ECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECS-SCEEEEEECS-SEEEEEETTTSCEEEEETT
T ss_pred             ------ccccceeeeeeccCCceEEEeecccceeeeccceeeeeecccc-ceeeeeeccC-cceeeeccccceeeeeecc
Confidence                  134567788899999777777788888888 566677776643 4455444332 346666665 579999987


Q ss_pred             CCeEEEEEe-CCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCCc----eEeeCCccEEEEEEcCCC----------c-
Q psy7057         149 TGKCVHTMY-GHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQN----SFMIPAMSVWAVAILPNS----------D-  210 (557)
Q Consensus       149 ~~~~~~~~~-~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~~----~~~~~~~~v~~v~~~p~g----------~-  210 (557)
                      ..+....+. .|...+.+++|  ++.+|++|+.||.|++||.....    .+..|...|.+++|+|.+          . 
T Consensus       150 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~  229 (287)
T d1pgua2         150 DLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDL  229 (287)
T ss_dssp             EEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCE
T ss_pred             ccceeeeeeeccCCceeEEEeccCccccccccccccccceeecccccccccccccccccceeeecccccccccccCCCCe
Confidence            766665554 47788999999  67899999999999999987662    345678899999998853          3 


Q ss_pred             EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEec
Q psy7057         211 IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSA  270 (557)
Q Consensus       211 l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~  270 (557)
                      +++|+.|++|+||++...... .....+|...+..+.+.+..  .+++++.||+||+|++
T Consensus       230 l~sgs~D~~i~iw~~~~~~~~-~~~~~~h~~~V~~v~~~~~~--~l~s~g~D~~v~iW~i  286 (287)
T d1pgua2         230 VATGSLDTNIFIYSVKRPMKI-IKALNAHKDGVNNLLWETPS--TLVSSGADACIKRWNV  286 (287)
T ss_dssp             EEEEETTSCEEEEESSCTTCC-EEETTSSTTCEEEEEEEETT--EEEEEETTSCEEEEEE
T ss_pred             eEeecCCCeEEEEECCCCCeE-EEEeCCCCCCeEEEEECCCC--EEEEEECCCeEEEEEE
Confidence            889999999999998764322 23345678889999887654  4799999999999985

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.95  E-value=2.9e-26  Score=228.35  Aligned_cols=261  Identities=20%  Similarity=0.295  Sum_probs=197.5

Q ss_pred             EEEeccCcccE-EEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEEC
Q psy7057           5 STALYGHSMDV-RSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCL   66 (557)
Q Consensus         5 ~~~l~gH~~~V-~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~   66 (557)
                      ..+|+||.+.| +|++|+  ++ |+||+.||+|+|||+.+                +++++ +++|++|+.|++|++|++
T Consensus         5 ~~tL~GH~~~vitc~~~~--~~~l~tgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~l~~s~-~~~l~s~s~D~~i~iw~~   81 (355)
T d1nexb2           5 RTTLRGHMTSVITCLQFE--DNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAH-GGILVSGSTDRTVRVWDI   81 (355)
T ss_dssp             EEEEECCSSSCEEEEEEE--TTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEEET-TTEEEEEETTCCEEEEET
T ss_pred             cEEECCcCCCcEEEEEEC--CCEEEEEeCCCeEEEEECCCCcEEEEEECCCCCEEEEEEcC-CCEEEEEecccccccccc
Confidence            56799998885 666664  55 99999999999999976                44554 568999999999999999


Q ss_pred             CCCeEEEEEcccCC--cEEEEEEcCCC-EEEEEECCCeEEEEeCCCc-E-----------------------EEEEeCCC
Q psy7057          67 ESQQCKLTIRQHEM--AVWGVIQLANG-IIVTGCADKTIKLHSEEGE-F-----------------------LKTLTGHT  119 (557)
Q Consensus        67 ~~~~~~~~l~~h~~--~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~-~-----------------------~~~l~~h~  119 (557)
                      ...+.......+..  ......+.+++ .+++++.|+.|++|+.... .                       +.....|.
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (355)
T d1nexb2          82 KKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHM  161 (355)
T ss_dssp             TTTEEEEEECCCSSCEEEEEEEEETTEEEEEEEETTSEEEEEECCC-----------CCCEEESCTTTCTTEEEEEECCS
T ss_pred             cccccccccccccccccccccccccccceeeeecCCCcEEEEEccCCceeccccccceeccceeccccccceeeeeeecc
Confidence            99888777655443  34455666776 8999999999999994322 1                       11223344


Q ss_pred             CCEEEEEEeCCCeEEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC---ceEe
Q psy7057         120 DCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ---NSFM  194 (557)
Q Consensus       120 ~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~---~~~~  194 (557)
                      ..+.+.... ...+++++.|+.|++||+++++.+..+.++...+.++.+  .+..+++++.|++|++|+..+.   ..+.
T Consensus       162 ~~v~~~~~~-~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~  240 (355)
T d1nexb2         162 ASVRTVSGH-GNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQ  240 (355)
T ss_dssp             SCEEEEEEE-TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred             ccccccccc-cceeeeecccceeeeeecccccceeeeeccccccccccccccceeeecccccceEEeeeccccccccccc
Confidence            455544433 244779999999999999999999999999999999988  6779999999999999998766   5667


Q ss_pred             eCCccEEEEEEcCCCcEEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCCh
Q psy7057         195 IPAMSVWAVAILPNSDIVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDR  274 (557)
Q Consensus       195 ~~~~~v~~v~~~p~g~l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~~  274 (557)
                      .|...|.+++++++ .+++++.||.|++||+++.....    ..+...+..+.+.+.+.. +++++.||+|+||++.+++
T Consensus       241 ~h~~~v~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~----~~~~~~~~~~~~~~~~~~-~l~~g~d~~i~vwd~~tg~  314 (355)
T d1nexb2         241 GHTALVGLLRLSDK-FLVSAAADGSIRGWDANDYSRKF----SYHHTNLSAITTFYVSDN-ILVSGSENQFNIYNLRSGK  314 (355)
T ss_dssp             CCSSCCCEEEECSS-EEEEECTTSEEEEEETTTCCEEE----EEECTTCCCCCEEEECSS-EEEEEETTEEEEEETTTCC
T ss_pred             cccccccccccccc-eeeeeecccccccccccccceec----ccccCCceEEEEEcCCCC-EEEEEeCCEEEEEECCCCC
Confidence            78889999999753 38999999999999998765431    223334444444444443 4555669999999988764


Q ss_pred             h
Q psy7057         275 Q  275 (557)
Q Consensus       275 ~  275 (557)
                      .
T Consensus       315 ~  315 (355)
T d1nexb2         315 L  315 (355)
T ss_dssp             B
T ss_pred             E
Confidence            3

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.95  E-value=5.6e-27  Score=235.30  Aligned_cols=221  Identities=14%  Similarity=0.164  Sum_probs=180.3

Q ss_pred             EEEeccCc-ccEEEEEEcCC--Cc-EEEEECCCcEEEEcCCC------------------------CCCCCCCCEEEEEE
Q psy7057           5 STALYGHS-MDVRSLSVTPD--GC-ILSASRDKSAKLWKPND------------------------LSPGAKVNTLLSAS   56 (557)
Q Consensus         5 ~~~l~gH~-~~V~~l~~spd--g~-l~sgs~Dg~V~iWd~~~------------------------~~~~~~~~~l~sgs   56 (557)
                      ...+.+|. ..|++++|+|+  +. |++|+.||+|+|||+..                        +.+++++.+|++++
T Consensus        55 ~~~~~gh~~~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~  134 (325)
T d1pgua1          55 VVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVG  134 (325)
T ss_dssp             EEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred             eEEEeCCCCCCEEEEEEeeCCCCCEEEEEeCCCCEEEeeecCCcceeeeecccccccccccCcEEEEEECCCCCccceee
Confidence            45677874 68999999984  55 78999999999998753                        56678889888876


Q ss_pred             C--CCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEeC-CCcEEEEE---eCCCCCEEEEEEe
Q psy7057          57 W--DMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHSE-EGEFLKTL---TGHTDCVRGLAVL  128 (557)
Q Consensus        57 ~--Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~-~~~~~~~l---~~h~~~V~~l~~~  128 (557)
                      .  ++.+++|+.++++++..+.+|...|.+++|+|++  .+++++.|+.+++|+. ..+....+   ..|...|++++|+
T Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~v~~v~~~  214 (325)
T d1pgua1         135 EGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFS  214 (325)
T ss_dssp             CCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEEC
T ss_pred             ccccceEEEEeecccccceeeeecccccccccccccccceEEEeecccccccccccccccceecccccCCCCccEEeeec
Confidence            5  6789999999999999999999999999999987  6889999999999994 44444443   4577889999999


Q ss_pred             CC-Ce-EEEEECCCeEEEEECCCCeEEEEEeCCCCcE----EEEEE-cCCEEEEEeCCCeEEEEECCCCc---eEeeCCc
Q psy7057         129 ND-TD-FVSCSNDASIRVWDSTTGKCVHTMYGHPNFI----YSVAA-HGDLITSGGEDQCVCVYQNKAQN---SFMIPAM  198 (557)
Q Consensus       129 ~~-~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V----~~l~~-~~~~l~s~s~Dg~I~iwd~~~~~---~~~~~~~  198 (557)
                      |+ +. +++++.|+.|++||+++++++.++.+|...+    +++++ ++.+|++++.|++|++||+++.+   .+..+..
T Consensus       215 pd~~~~l~s~~~d~~i~iwd~~~~~~~~~l~~~~~~v~~~~~s~~~~dg~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~  294 (325)
T d1pgua1         215 PDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQ  294 (325)
T ss_dssp             STTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEEECCTT
T ss_pred             cccceeccccccccceeeeeeccccccccccccccccccceeeeeccCCCEEEEEeCCCeEEEEECCCCCEEEEEEecCC
Confidence            97 44 6799999999999999999999998887654    56666 68899999999999999987663   3333433


Q ss_pred             --cE--EEEEEcCCCcEEEEEcCCcEEEEec
Q psy7057         199 --SV--WAVAILPNSDIVTGSSDGIVRVFSA  225 (557)
Q Consensus       199 --~v--~~v~~~p~g~l~sg~~Dg~I~iwd~  225 (557)
                        .+  .++.+.+++.+++++.||+|++||+
T Consensus       295 ~~~~~~~~~~~~~~~~l~s~s~dg~i~vwdl  325 (325)
T d1pgua1         295 QLGNQQVGVVATGNGRIISLSLDGTLNFYEL  325 (325)
T ss_dssp             CGGGCEEEEEEEETTEEEEEETTSCEEEEET
T ss_pred             cccCeEEEEEECCCCEEEEEECCCEEEEEEC
Confidence              23  3445555666999999999999986

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.95  E-value=2.3e-26  Score=234.31  Aligned_cols=219  Identities=28%  Similarity=0.479  Sum_probs=180.4

Q ss_pred             eccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEECCCCe
Q psy7057           8 LYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCLESQQ   70 (557)
Q Consensus         8 l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~   70 (557)
                      ..+|...|++|+|+|+++ |++|+.||+|++|+...                +.+.+.+..+++++.++.+++||..+..
T Consensus       117 ~~~~~~~V~~l~~s~~~~~l~s~~~dg~v~i~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~  196 (388)
T d1erja_         117 SPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQ  196 (388)
T ss_dssp             --CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred             ccCCCCCEEEEEECCCCCcceecccccccccccccccccccccccccccccccccccccccccccccceeeeeeeccccc
Confidence            346888899999999998 88999999999999876                4566778999999999999999999988


Q ss_pred             EEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEE-------eCCCCCEEEEEEeCCCe-EEEEECCC
Q psy7057          71 CKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTL-------TGHTDCVRGLAVLNDTD-FVSCSNDA  140 (557)
Q Consensus        71 ~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l-------~~h~~~V~~l~~~~~~~-lvs~s~Dg  140 (557)
                      .......+...+..+.+.+++ .|++|+.|+.|++|+ .++..+..+       .+|...|++++|+|++. |++++.|+
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d~  276 (388)
T d1erja_         197 CSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDR  276 (388)
T ss_dssp             EEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred             cccccccccccccccccCCCCCeEEEEcCCCeEEEeecccCccceeeccccccccCCCCCEEEEEECCCCCEEEEEECCC
Confidence            888777666555444444465 899999999999999 445554443       46889999999999976 77999999


Q ss_pred             eEEEEECCCCe------------EEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC---ceEeeCCccEEEE
Q psy7057         141 SIRVWDSTTGK------------CVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWAV  203 (557)
Q Consensus       141 ~I~vwd~~~~~------------~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v  203 (557)
                      .|++||++++.            +......|...|.++++  ++++|++|+.||+|++||+.+.   ..+..|...|.++
T Consensus       277 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~l~~H~~~V~~~  356 (388)
T d1erja_         277 SVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISV  356 (388)
T ss_dssp             EEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEE
T ss_pred             cEEEEeccCCccccccccccccceeeecccccceEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEeCCCCCEEEE
Confidence            99999987543            34556678999999999  7789999999999999998766   6678899999999


Q ss_pred             EE------cCCCc-EEEEEcCCcEEEEecC
Q psy7057         204 AI------LPNSD-IVTGSSDGIVRVFSAN  226 (557)
Q Consensus       204 ~~------~p~g~-l~sg~~Dg~I~iwd~~  226 (557)
                      ++      +|++. |++|+.||+|+||+++
T Consensus       357 ~~~~~~~~spd~~~l~s~s~Dg~I~iW~~~  386 (388)
T d1erja_         357 AVANGSSLGPEYNVFATGSGDCKARIWKYK  386 (388)
T ss_dssp             EECSSCTTCTTCEEEEEEETTSEEEEEEEE
T ss_pred             EEecCcccCCCCCEEEEEeCCCEEEEEeee
Confidence            86      46777 8899999999999974

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.95  E-value=1.3e-25  Score=223.15  Aligned_cols=223  Identities=22%  Similarity=0.277  Sum_probs=195.5

Q ss_pred             cEEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCCC-------------------CCCCCCCEEEEEECCCeE
Q psy7057           2 YKLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPNDL-------------------SPGAKVNTLLSASWDMTA   61 (557)
Q Consensus         2 ~kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~~-------------------~~~~~~~~l~sgs~Dg~i   61 (557)
                      .+..+.+.+|...|++++|+|++. +++|+.|+.+++|+....                   ........+.....+...
T Consensus        87 ~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (340)
T d1tbga_          87 TNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTC  166 (340)
T ss_dssp             TEEEEEEECSCSCEEEEEECTTSSEEEEEETTCCEEEEESSSSCSCCCEEEEECCCSSCEEEEEEEETTEEEEEETTTEE
T ss_pred             ceeEEEEecccccEEeeEeeccceeeeeecccceeecccccccccccccceecccccccccccccccccccccccccccc
Confidence            356788999999999999999998 889999999999997651                   111234567888899999


Q ss_pred             EEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEEC
Q psy7057          62 KLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSN  138 (557)
Q Consensus        62 ~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~  138 (557)
                      ..+.............+...+.+..+.+.+ .+++|+.|+.|++|| .++.++..+.+|...|++++|+|++. |++|+.
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i~d~~~~~~~~~~~~h~~~i~~v~~~p~~~~l~s~s~  246 (340)
T d1tbga_         167 ALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSD  246 (340)
T ss_dssp             EEEETTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred             cccccccccccccccccceeEeeeccccccceeEEeecCceEEEEECCCCcEEEEEeCCCCCeEEEEECCCCCEEEEEeC
Confidence            999998888888888889999999999877 899999999999999 67788899999999999999999976 779999


Q ss_pred             CCeEEEEECCCCeEEEEEe--CCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC---ceEeeCCccEEEEEEcCCCc-
Q psy7057         139 DASIRVWDSTTGKCVHTMY--GHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ---NSFMIPAMSVWAVAILPNSD-  210 (557)
Q Consensus       139 Dg~I~vwd~~~~~~~~~~~--~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~---~~~~~~~~~v~~v~~~p~g~-  210 (557)
                      |+.|++||++..+.+..+.  .|...|.++++  ++++|++|+.||.|++||+.+.   ..+..|...|++++|+|++. 
T Consensus       247 d~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~H~~~V~~l~~s~d~~~  326 (340)
T d1tbga_         247 DATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMA  326 (340)
T ss_dssp             TSCEEEEETTTTEEEEEECCTTCCSCEEEEEECSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSC
T ss_pred             CCeEEEEeecccccccccccccccCceEEEEECCCCCEEEEEECCCEEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCE
Confidence            9999999999998887764  46678999999  6789999999999999997765   56777899999999999998 


Q ss_pred             EEEEEcCCcEEEEe
Q psy7057         211 IVTGSSDGIVRVFS  224 (557)
Q Consensus       211 l~sg~~Dg~I~iwd  224 (557)
                      |++|+.||+|+|||
T Consensus       327 l~s~s~Dg~v~iWd  340 (340)
T d1tbga_         327 VATGSWDSFLKIWN  340 (340)
T ss_dssp             EEEEETTSCEEEEC
T ss_pred             EEEEccCCEEEEeC
Confidence            99999999999997

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.95  E-value=4.3e-26  Score=234.78  Aligned_cols=226  Identities=14%  Similarity=0.204  Sum_probs=173.5

Q ss_pred             EEEeccCcccEEEEEEcCCCcEEEEECCCcEEEEcCCCCC-----------------------------CCCCCCEEEEE
Q psy7057           5 STALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPNDLS-----------------------------PGAKVNTLLSA   55 (557)
Q Consensus         5 ~~~l~gH~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~~~-----------------------------~~~~~~~l~sg   55 (557)
                      ....++|.+.|++|++++ ..|+|||.|++|+|||.....                             .......++++
T Consensus         7 ~~~~~~H~~~I~~v~~~~-~~l~S~S~D~~iriWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~   85 (393)
T d1sq9a_           7 ANAGKAHDADIFSVSACN-SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATT   85 (393)
T ss_dssp             EEESSCSSSCEEEEEECS-SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEE
T ss_pred             eecCCcccCccEEEEEeC-CEEEEEECCCeEEEEECCCCCCCcccceeEeeeeccCCceEeeeEeeeccCCCCCcEEEEE
Confidence            456789999999999875 359999999999999965410                             00112467799


Q ss_pred             ECCCeEEEEECCCCeE-----EEEE-----cccCCcEEEEEEcCC-----C-EEEEEECCCeEEEEeCCC----------
Q psy7057          56 SWDMTAKLWCLESQQC-----KLTI-----RQHEMAVWGVIQLAN-----G-IIVTGCADKTIKLHSEEG----------  109 (557)
Q Consensus        56 s~Dg~i~iwd~~~~~~-----~~~l-----~~h~~~V~~l~~~~~-----~-~l~sgs~dg~I~vwd~~~----------  109 (557)
                      +.||+|++|++.....     ....     ..+...++.+++.++     + .+++++.|+++++|+...          
T Consensus        86 ~~dg~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~~~~~  165 (393)
T d1sq9a_          86 SFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTL  165 (393)
T ss_dssp             ETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTT
T ss_pred             eCCCcEEEEEccCCCceeeeeccccceeeeccCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCcccceeee
Confidence            9999999999754321     1111     124556778887764     2 789999999999998311          


Q ss_pred             --cE-------EEEEeCCCCCEEEEEEeCCCeEEEEECCCeEEEEECCCCeEEEEE------eCCCCcEEEEEE--cCCE
Q psy7057         110 --EF-------LKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTM------YGHPNFIYSVAA--HGDL  172 (557)
Q Consensus       110 --~~-------~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~~~~~~------~~h~~~V~~l~~--~~~~  172 (557)
                        ..       ......+...+.+++++|++.|++|+.|++|++||+.+++++..+      .+|...|++++|  ++++
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~spdg~~  245 (393)
T d1sq9a_         166 NWSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSL  245 (393)
T ss_dssp             CCCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTE
T ss_pred             eeccceecccceecccCCCCcEEEEEECCCCEEEEEeCCCcEEEEeecccccccccccccccccccceEEEcccccccce
Confidence              00       111224556789999999999999999999999999999887655      468999999999  7789


Q ss_pred             EEEEeCCC---eEEEEECCCC---ceE-------------eeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcc
Q psy7057         173 ITSGGEDQ---CVCVYQNKAQ---NSF-------------MIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQA  231 (557)
Q Consensus       173 l~s~s~Dg---~I~iwd~~~~---~~~-------------~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~  231 (557)
                      |++|+.|+   .|++||+...   ..+             .+|...|++++|+|+++ |++|+.|++|||||+.+++..
T Consensus       246 l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd~~~g~~~  324 (393)
T d1sq9a_         246 LAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERI  324 (393)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEE
T ss_pred             eeeecCCCCcceeeecccccceeeeeeccccccccceeeeecccCceeeeccCCCCCeeEEECCCCEEEEEECCCCCEE
Confidence            99999987   4899997654   222             36888999999999998 899999999999999887654

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=6.8e-25  Score=217.10  Aligned_cols=223  Identities=24%  Similarity=0.441  Sum_probs=189.4

Q ss_pred             cEEEEEeccCcccEEEEEEcCCCcEEEEECCCcEEEEcCCC---------------------------------------
Q psy7057           2 YKLSTALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPND---------------------------------------   42 (557)
Q Consensus         2 ~kl~~~l~gH~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~---------------------------------------   42 (557)
                      .++.++|.+|.+.|++++|+|+ .|++|+.|+++++|+...                                       
T Consensus        47 ~~~~~~~~~h~~~V~~v~~~~~-~l~s~s~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~  125 (342)
T d2ovrb2          47 GKCLRTLVGHTGGVWSSQMRDN-IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIE  125 (342)
T ss_dssp             CCEEEECCCCSSCEEEEEEETT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESS
T ss_pred             CCEEEEEeCCCCCEEEEEeCCC-ccccceecccccccccccccceecccccceeEeeeecccccccccccceeEEEeecc
Confidence            3678899999999999999975 799999999999999876                                       


Q ss_pred             ---------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCCEEEEEECCCeEEEEe-
Q psy7057          43 ---------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHS-  106 (557)
Q Consensus        43 ---------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd-  106 (557)
                                     .........+++++.|+.+++|++...+.+..+.+|...+.++.+. ...+++|+.|+.|++|| 
T Consensus       126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~l~s~~~dg~i~~~d~  204 (342)
T d2ovrb2         126 TGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD-GIHVVSGSLDTSIRVWDV  204 (342)
T ss_dssp             SCCEEEEEECCSSCEEEEEECSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEEC-SSEEEEEETTSCEEEEET
T ss_pred             cccceeeeecccccceeeccccceeeeecCCCeEEEeecccceeeEEEcCcccccccccCC-CCEEEEEeCCCeEEEeec
Confidence                           0111234568899999999999999999999999999888777663 23899999999999999 


Q ss_pred             CCCcEEEEEeCCCCCEEEEEEeCCCeEEEEECCCeEEEEECCCCeEEEEEeC---CCCcEEEEEEcCCEEEEEeCCCeEE
Q psy7057         107 EEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYG---HPNFIYSVAAHGDLITSGGEDQCVC  183 (557)
Q Consensus       107 ~~~~~~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~~~~~~~~---h~~~V~~l~~~~~~l~s~s~Dg~I~  183 (557)
                      ..++++..+.+|...+.++++++ ..|++++.|++|++||+...+....+..   |...+.++.++++++++|+.||+|+
T Consensus       205 ~~~~~~~~~~~~~~~v~~~~~~~-~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~s~Dg~i~  283 (342)
T d2ovrb2         205 ETGNCIHTLTGHQSLTSGMELKD-NILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVK  283 (342)
T ss_dssp             TTCCEEEEECCCCSCEEEEEEET-TEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEEEEEETTSEEE
T ss_pred             ccceeeeEecccccceeEEecCC-CEEEEEcCCCEEEEEecccccccccccccceeeeceeecccCCCeeEEEcCCCEEE
Confidence            56788899999999999999876 4688999999999999999988888865   5678889999999999999999999


Q ss_pred             EEECCCCc---eEe-----eCCccEEEEEEcCCCc-EEEEEcCCc----EEEEecCC
Q psy7057         184 VYQNKAQN---SFM-----IPAMSVWAVAILPNSD-IVTGSSDGI----VRVFSANP  227 (557)
Q Consensus       184 iwd~~~~~---~~~-----~~~~~v~~v~~~p~g~-l~sg~~Dg~----I~iwd~~~  227 (557)
                      +||+++.+   .+.     .|...|++++|+|++. +++|+.||+    |++||++.
T Consensus       284 iwd~~tg~~i~~~~~~~~~~~~~~v~~v~~s~~~~~la~g~~dGt~~~~l~~~Df~~  340 (342)
T d2ovrb2         284 LWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV  340 (342)
T ss_dssp             EEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred             EEECCCCCEEEEEecccCCCCCCCEEEEEECCCCCEEEEEeCCCCCeeEEEEEeCCC
Confidence            99987763   332     3556799999999998 778888885    99999874

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.93  E-value=2e-24  Score=212.28  Aligned_cols=226  Identities=19%  Similarity=0.180  Sum_probs=181.5

Q ss_pred             CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEc-ccCCcEEEEEEcCCCEEEEEECCCeEEEEeCCCcE----EEEEeC
Q psy7057          43 LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIR-QHEMAVWGVIQLANGIIVTGCADKTIKLHSEEGEF----LKTLTG  117 (557)
Q Consensus        43 ~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~-~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~~~~~----~~~l~~  117 (557)
                      ++++|++++|++|+.|++|++||+++++++..+. .|...|++++|+|++.+++++.|+.+++|+..+..    ......
T Consensus        18 l~~s~dg~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~h~~~v~~v~~~~~g~~~~~~~d~~v~~~~~~~~~~~~~~~~~~~   97 (299)
T d1nr0a2          18 LSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANK   97 (299)
T ss_dssp             EEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEE
T ss_pred             EEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCCcEEEEEeeccceeecccceeeEEEeccCCcccccccccccc
Confidence            4567789999999999999999999999888874 68999999999999988899999999999944322    222345


Q ss_pred             CCCCEEEEEEeCCCeEEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC----c
Q psy7057         118 HTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ----N  191 (557)
Q Consensus       118 h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~----~  191 (557)
                      +...+.++++++++.+++++.++.+++|+.  .+.......  ..+.++++  ++++|++++.|+.|++||+...    .
T Consensus        98 ~~~~~~~~~~s~~g~~~~~~~~~~i~~~~~--~~~~~~~~~--~~~~~~~~s~~~~~l~~g~~dg~i~~~d~~~~~~~~~  173 (299)
T d1nr0a2          98 LSSQPLGLAVSADGDIAVAACYKHIAIYSH--GKLTEVPIS--YNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEV  173 (299)
T ss_dssp             CSSCEEEEEECTTSSCEEEEESSEEEEEET--TEEEEEECS--SCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEE
T ss_pred             cccccccccccccccccccccccccccccc--ccccccccc--ccccccccccccccccccccccccccccccccccccc
Confidence            778899999999999887777889999993  444444433  44567777  7789999999999999997654    2


Q ss_pred             eEeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcch-hHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEe
Q psy7057         192 SFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAE-DAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFS  269 (557)
Q Consensus       192 ~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~-~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~  269 (557)
                      ....|...|.+++|+|++. +++++.|+.|++|++.+..... ......|...+..+.+.+... .+++|+.||.|+||+
T Consensus       174 ~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-~l~sgs~dg~i~iwd  252 (299)
T d1nr0a2         174 KTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNV-RLATGSLDNSVIVWN  252 (299)
T ss_dssp             EEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSS-EEEEEETTSCEEEEE
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-ceEEEcCCCEEEEEE
Confidence            3456788999999999998 8899999999999987654432 233445677888888877654 589999999999999


Q ss_pred             cCCC
Q psy7057         270 ANPD  273 (557)
Q Consensus       270 ~~~~  273 (557)
                      +...
T Consensus       253 ~~~~  256 (299)
T d1nr0a2         253 MNKP  256 (299)
T ss_dssp             TTCT
T ss_pred             CCCC
Confidence            8754

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.93  E-value=5.7e-25  Score=217.03  Aligned_cols=265  Identities=13%  Similarity=0.053  Sum_probs=187.4

Q ss_pred             cEEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC-------------------CCCCCC-CCEEEEEECCCe
Q psy7057           2 YKLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND-------------------LSPGAK-VNTLLSASWDMT   60 (557)
Q Consensus         2 ~kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~-------------------~~~~~~-~~~l~sgs~Dg~   60 (557)
                      .|+++.+++|++.|++|+|+|++. |++||.||+|+|||+..                   +++.++ +.+|++|+.|++
T Consensus         1 ~~~v~~~~~h~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~   80 (342)
T d1yfqa_           1 MQIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGE   80 (342)
T ss_dssp             CEEEECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSC
T ss_pred             CCeEEcCCCCCCCEEEEEEeCCCCEEEEEECCCeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCCCCCEEEEcccccc
Confidence            478899999999999999999998 88999999999999754                   445544 458999999999


Q ss_pred             EEEEECCCCeEEEEEcccCCc-EEEEEEcCC-CEEEEEECCCeEEEEeC-----CCcEEEEEeCCC--CCEEEEEEeCC-
Q psy7057          61 AKLWCLESQQCKLTIRQHEMA-VWGVIQLAN-GIIVTGCADKTIKLHSE-----EGEFLKTLTGHT--DCVRGLAVLND-  130 (557)
Q Consensus        61 i~iwd~~~~~~~~~l~~h~~~-V~~l~~~~~-~~l~sgs~dg~I~vwd~-----~~~~~~~l~~h~--~~V~~l~~~~~-  130 (557)
                      |++|++...........+... .....+.++ ..+++++.++++++||.     ..........+.  .....+.+.+. 
T Consensus        81 v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (342)
T d1yfqa_          81 ILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNS  160 (342)
T ss_dssp             EEEECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECS
T ss_pred             eeeeecccccccccccccccccccccccccccccccccccccccceeeccccccceeeecccccccccceeeeeeeeccC
Confidence            999999888766666554433 333334444 49999999999999992     122233333332  23344455544 


Q ss_pred             CeEEEEECCCeEEEEECCCCeE---EEEEeCCCCcEEEEEE---cCCEEEEEeCCCeEEEEECCCC---------ce---
Q psy7057         131 TDFVSCSNDASIRVWDSTTGKC---VHTMYGHPNFIYSVAA---HGDLITSGGEDQCVCVYQNKAQ---------NS---  192 (557)
Q Consensus       131 ~~lvs~s~Dg~I~vwd~~~~~~---~~~~~~h~~~V~~l~~---~~~~l~s~s~Dg~I~iwd~~~~---------~~---  192 (557)
                      ..+++++.|+.|++||++..+.   ......+...+.+...   ++..+++++.||.+.+|+....         ..   
T Consensus       161 ~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~~~~~~~~~~~~~~  240 (342)
T d1yfqa_         161 SRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRC  240 (342)
T ss_dssp             SEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEEC
T ss_pred             CceeeecCCCcEEEEecccCcccceeeeecccccceeeeEeecCCCCEEEeecCCCeEEEEEecCCcceeeccccceeee
Confidence            4588999999999999976543   2233345555666665   5678999999999999984322         11   


Q ss_pred             ------EeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcE
Q psy7057         193 ------FMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIV  265 (557)
Q Consensus       193 ------~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~I  265 (557)
                            ...|...+++++|+|++. |++|+.||+|++||+.+.+.+.... ..+...+  +.+.+. +..++++++|+.+
T Consensus       241 ~~~~~~~~~~~~~v~~l~~sp~~~~lasg~~Dg~v~vWD~~~~~~l~~~~-~~~~~~~--~~~s~~-~~~l~~a~sdd~~  316 (342)
T d1yfqa_         241 HRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFA-KFNEDSV--VKIACS-DNILCLATSDDTF  316 (342)
T ss_dssp             CCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECC-CCSSSEE--EEEEEC-SSEEEEEEECTHH
T ss_pred             eeeccCCCcccccceeEEecCCccEEEEECCCCEEEEEECCCCcEEEEec-CCCCCEE--EEEEeC-CCEEEEEEcCCcE
Confidence                  123455789999999998 9999999999999999876543221 1222233  333333 3356777788877


Q ss_pred             EEEec
Q psy7057         266 RVFSA  270 (557)
Q Consensus       266 rvW~~  270 (557)
                      ++|..
T Consensus       317 ~~~~~  321 (342)
T d1yfqa_         317 KTNAA  321 (342)
T ss_dssp             HHCSS
T ss_pred             EEeee
Confidence            77754

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=6.9e-23  Score=197.80  Aligned_cols=218  Identities=25%  Similarity=0.377  Sum_probs=185.5

Q ss_pred             cEEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC--------------CCCCCCCCEEEEEECCCeEEEEEC
Q psy7057           2 YKLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND--------------LSPGAKVNTLLSASWDMTAKLWCL   66 (557)
Q Consensus         2 ~kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~--------------~~~~~~~~~l~sgs~Dg~i~iwd~   66 (557)
                      .++.++|++|.+.|++|+|+  ++ |++|+.|++|++|++..              .........++++..++.+++|+.
T Consensus        45 ~~~~~~l~~H~~~V~~v~~~--~~~l~s~s~D~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (293)
T d1p22a2          45 LECKRILTGHTGSVLCLQYD--ERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDM  122 (293)
T ss_dssp             CCEEEEECCCSSCEEEEECC--SSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECCTTEEEEEETTSCEEEEEC
T ss_pred             CcEEEEEecCCCCEeeeecc--cceeecccccccccccccccccccccccccccccccccccccceeecccccceeEeec
Confidence            46788999999999999874  45 89999999999999876              233345678999999999999998


Q ss_pred             CCCe---EEEEEcccCCcEEEEEEcCCCEEEEEECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCeEEEEECCCeE
Q psy7057          67 ESQQ---CKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASI  142 (557)
Q Consensus        67 ~~~~---~~~~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~I  142 (557)
                      .+..   ....+..|...|.++.+.+. .+++++.|+.|++|| .+++++..+.+|...+..+.+++ ..+++++.|++|
T Consensus       123 ~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~s~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~-~~l~~~~~dg~i  200 (293)
T d1p22a2         123 ASPTDITLRRVLVGHRAAVNVVDFDDK-YIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD-RLVVSGSSDNTI  200 (293)
T ss_dssp             SSSSCCEEEEEECCCSSCEEEEEEETT-EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEET-TEEEEEETTSCE
T ss_pred             cccccccccccccccccccccceeccc-ccccccCCCceeeecCCCCcEEEEEcccccccccccCCC-CeEEEecCCCEE
Confidence            7654   45667788999988877643 678899999999999 56788899999999999988874 468899999999


Q ss_pred             EEEECCCCeEEEEEeCCCCcEEEEEEcCCEEEEEeCCCeEEEEECCC-----------C-ceEeeCCccEEEEEEcCCCc
Q psy7057         143 RVWDSTTGKCVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKA-----------Q-NSFMIPAMSVWAVAILPNSD  210 (557)
Q Consensus       143 ~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~-----------~-~~~~~~~~~v~~v~~~p~g~  210 (557)
                      ++||+++.+.+..+.+|...+.++..++.+|++++.||.|++||+..           . ..+..|...|++++|++. .
T Consensus       201 ~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~H~~~V~~v~~d~~-~  279 (293)
T d1p22a2         201 RLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEF-Q  279 (293)
T ss_dssp             EEEETTTCCEEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEECSS-C
T ss_pred             EEEecccceeeeeecccceeeeeccccceEEEEEcCCCEEEEEECCCCccccccCCceeeEEecCCCCCEEEEEEcCC-E
Confidence            99999999999999999999999888999999999999999999321           1 456778999999999543 3


Q ss_pred             EEEEEcCCcEEEEe
Q psy7057         211 IVTGSSDGIVRVFS  224 (557)
Q Consensus       211 l~sg~~Dg~I~iwd  224 (557)
                      |++|+.||+|+|||
T Consensus       280 l~s~s~Dg~i~iWD  293 (293)
T d1p22a2         280 IVSSSHDDTILIWD  293 (293)
T ss_dssp             EEECCSSSEEEEEC
T ss_pred             EEEEecCCEEEEeC
Confidence            99999999999997

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.91  E-value=2.2e-23  Score=203.60  Aligned_cols=216  Identities=14%  Similarity=0.077  Sum_probs=171.3

Q ss_pred             EEeccCcccEEEEEEcCCCcEEEEECCCcEEEEcCCC---------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEc
Q psy7057           6 TALYGHSMDVRSLSVTPDGCILSASRDKSAKLWKPND---------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIR   76 (557)
Q Consensus         6 ~~l~gH~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~---------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~   76 (557)
                      ....+|...|.++++++++.+++++.|++|++|++..         +...++ ..++..+.++.+.+|+..+++.+..+.
T Consensus        40 ~~~~~h~~~V~~~~~~~~~~~~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  118 (287)
T d1pgua2          40 SMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANND-GFTAVLTNDDDLLILQSFTGDIIKSVR  118 (287)
T ss_dssp             EEECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSS-SEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred             CCCCCCCCCEEEEEecCCCeEEEEeeccccccccccccccccceeeeeeccC-CceEEEeecccceeeeccceeeeeecc
Confidence            4567899999999999888899999999999999765         333433 445555677789999999998888876


Q ss_pred             ccCCcEEEEEEcCCC-EEEEEECC-CeEEEEeCCCc-EEEEE-eCCCCCEEEEEEeCCCe-EEEEECCCeEEEEECCCCe
Q psy7057          77 QHEMAVWGVIQLANG-IIVTGCAD-KTIKLHSEEGE-FLKTL-TGHTDCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGK  151 (557)
Q Consensus        77 ~h~~~V~~l~~~~~~-~l~sgs~d-g~I~vwd~~~~-~~~~l-~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~  151 (557)
                      .+ ..+.++  .+++ .+++++.+ +.+++|+.... ....+ ..|...+++++|+|++. |++|+.|+.|++||+.+++
T Consensus       119 ~~-~~~~~~--~~~~~~~~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~  195 (287)
T d1pgua2         119 LN-SPGSAV--SLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSRE  195 (287)
T ss_dssp             CS-SCEEEE--EECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred             cc-ceeeee--eccCcceeeeccccceeeeeeccccceeeeeeeccCCceeEEEeccCccccccccccccccceeecccc
Confidence            44 444444  4444 66666665 57999995433 33333 35778999999999977 7799999999999999988


Q ss_pred             EEEE-EeCCCCcEEEEEEc------------CCEEEEEeCCCeEEEEECCCC----ceEeeCCccEEEEEEcCCCcEEEE
Q psy7057         152 CVHT-MYGHPNFIYSVAAH------------GDLITSGGEDQCVCVYQNKAQ----NSFMIPAMSVWAVAILPNSDIVTG  214 (557)
Q Consensus       152 ~~~~-~~~h~~~V~~l~~~------------~~~l~s~s~Dg~I~iwd~~~~----~~~~~~~~~v~~v~~~p~g~l~sg  214 (557)
                      .... +.+|...|.+++|+            +.+|++|+.|++|++||++..    ..+..|...|++++|+|++.|+++
T Consensus       196 ~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~~~~~~~~~~~~h~~~V~~v~~~~~~~l~s~  275 (287)
T d1pgua2         196 VKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPSTLVSS  275 (287)
T ss_dssp             EEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTEEEEE
T ss_pred             cccccccccccccceeeecccccccccccCCCCeeEeecCCCeEEEEECCCCCeEEEEeCCCCCCeEEEEECCCCEEEEE
Confidence            7654 56899999999872            458999999999999997653    334568889999999999889999


Q ss_pred             EcCCcEEEEec
Q psy7057         215 SSDGIVRVFSA  225 (557)
Q Consensus       215 ~~Dg~I~iwd~  225 (557)
                      +.|++|++|++
T Consensus       276 g~D~~v~iW~i  286 (287)
T d1pgua2         276 GADACIKRWNV  286 (287)
T ss_dssp             ETTSCEEEEEE
T ss_pred             ECCCeEEEEEE
Confidence            99999999986

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.88  E-value=2.5e-21  Score=198.67  Aligned_cols=185  Identities=15%  Similarity=0.223  Sum_probs=141.2

Q ss_pred             EEEEECCCcEEEEcCCC--------------------------CCCC-----CCCCEEEEEECCCeEEEEECCCCe----
Q psy7057          26 ILSASRDKSAKLWKPND--------------------------LSPG-----AKVNTLLSASWDMTAKLWCLESQQ----   70 (557)
Q Consensus        26 l~sgs~Dg~V~iWd~~~--------------------------~~~~-----~~~~~l~sgs~Dg~i~iwd~~~~~----   70 (557)
                      +++++.||.|++|++..                          +.+.     ....++++++.|+++++|++....    
T Consensus        82 ~~s~~~dg~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~  161 (393)
T d1sq9a_          82 VATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESN  161 (393)
T ss_dssp             EEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHH
T ss_pred             EEEEeCCCcEEEEEccCCCceeeeeccccceeeeccCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCcccc
Confidence            66899999999998643                          1111     224678999999999999974210    


Q ss_pred             -----------EEEE---EcccCCcEEEEEEcCCCEEEEEECCCeEEEEeC-CCcEEEE------EeCCCCCEEEEEEeC
Q psy7057          71 -----------CKLT---IRQHEMAVWGVIQLANGIIVTGCADKTIKLHSE-EGEFLKT------LTGHTDCVRGLAVLN  129 (557)
Q Consensus        71 -----------~~~~---l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~-~~~~~~~------l~~h~~~V~~l~~~~  129 (557)
                                 ....   ...+...+.+++|+|+++|++|+.|++|++||. +++++..      +.+|..+|++++|+|
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~sp  241 (393)
T d1sq9a_         162 SLTLNWSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSP  241 (393)
T ss_dssp             HTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECS
T ss_pred             eeeeeeccceecccceecccCCCCcEEEEEECCCCEEEEEeCCCcEEEEeecccccccccccccccccccceEEEccccc
Confidence                       1111   223556789999999999999999999999994 4555544      457999999999999


Q ss_pred             CCe-EEEEECCCe---EEEEECCCCeEEEEEe-------------CCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC
Q psy7057         130 DTD-FVSCSNDAS---IRVWDSTTGKCVHTMY-------------GHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ  190 (557)
Q Consensus       130 ~~~-lvs~s~Dg~---I~vwd~~~~~~~~~~~-------------~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~  190 (557)
                      ++. |++|+.|++   |++||+.+++++.++.             +|...|++++|  ++++|+||+.|++|++||+.+.
T Consensus       242 dg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd~~~g  321 (393)
T d1sq9a_         242 QGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTK  321 (393)
T ss_dssp             STTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTT
T ss_pred             ccceeeeecCCCCcceeeecccccceeeeeeccccccccceeeeecccCceeeeccCCCCCeeEEECCCCEEEEEECCCC
Confidence            977 669998874   9999999999888874             79999999999  6789999999999999998776


Q ss_pred             ---ceEeeCCccEE----EEEEcCCCc
Q psy7057         191 ---NSFMIPAMSVW----AVAILPNSD  210 (557)
Q Consensus       191 ---~~~~~~~~~v~----~v~~~p~g~  210 (557)
                         ..+.+|...|.    .++++|++.
T Consensus       322 ~~~~~l~gH~~~v~~~~~~~~~~~~~~  348 (393)
T d1sq9a_         322 ERITTLNMHCDDIEIEEDILAVDEHGD  348 (393)
T ss_dssp             EEEEEEECCGGGCSSGGGCCCBCTTSC
T ss_pred             CEEEEECCcCCcccCCccEEEECCCCC
Confidence               55666655443    244455444

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.86  E-value=1.3e-20  Score=185.27  Aligned_cols=231  Identities=16%  Similarity=0.142  Sum_probs=163.2

Q ss_pred             CCCCCCCCEEEEEECCCeEEEEECCCCe---EEEEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEeCC-CcEEEEEe
Q psy7057          43 LSPGAKVNTLLSASWDMTAKLWCLESQQ---CKLTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHSEE-GEFLKTLT  116 (557)
Q Consensus        43 ~~~~~~~~~l~sgs~Dg~i~iwd~~~~~---~~~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~~-~~~~~~l~  116 (557)
                      ++++|++++|++|+.|++|+|||+.++.   ......+|..+|.+++|+|++  .|++|+.|++|++|+.. ........
T Consensus        17 l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~v~~w~~~~~~~~~~~~   96 (342)
T d1yfqa_          17 IKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALT   96 (342)
T ss_dssp             EEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECB
T ss_pred             EEEeCCCCEEEEEECCCeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCCCCCEEEEcccccceeeeeccccccccccc
Confidence            5677889999999999999999987653   233344699999999999864  89999999999999943 33344444


Q ss_pred             CCC-CCEEEEEEeC-CCeEEEEECCCeEEEEECCCCe----EEEEEeCC----CCcEEEEEEcCCEEEEEeCCCeEEEEE
Q psy7057         117 GHT-DCVRGLAVLN-DTDFVSCSNDASIRVWDSTTGK----CVHTMYGH----PNFIYSVAAHGDLITSGGEDQCVCVYQ  186 (557)
Q Consensus       117 ~h~-~~V~~l~~~~-~~~lvs~s~Dg~I~vwd~~~~~----~~~~~~~h----~~~V~~l~~~~~~l~s~s~Dg~I~iwd  186 (557)
                      .+. .......+.+ ...+++++.|+++++||++++.    .......+    ......+...+..+++++.|+.|++|+
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~  176 (342)
T d1yfqa_          97 NNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFR  176 (342)
T ss_dssp             SCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSEEEEEESTTEEEEEE
T ss_pred             ccccccccccccccccccccccccccccceeeccccccceeeecccccccccceeeeeeeeccCCceeeecCCCcEEEEe
Confidence            333 3333334443 4568899999999999986533    22222222    223344555788999999999999999


Q ss_pred             CCCC------ceEeeCCccEEEEEEcCCCc--EEEEEcCCcEEEEecCCCCcchh-------------HHHhcccceeEE
Q psy7057         187 NKAQ------NSFMIPAMSVWAVAILPNSD--IVTGSSDGIVRVFSANPDRQAED-------------AVQAQYAEEVKK  245 (557)
Q Consensus       187 ~~~~------~~~~~~~~~v~~v~~~p~g~--l~sg~~Dg~I~iwd~~~~~~~~~-------------~~~~~~~~~v~~  245 (557)
                      +...      .........+.+..+.+...  +++++.||.+.+|+.........             .....+...+..
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  256 (342)
T d1yfqa_         177 LPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNS  256 (342)
T ss_dssp             SSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEE
T ss_pred             cccCcccceeeeecccccceeeeEeecCCCCEEEeecCCCeEEEEEecCCcceeeccccceeeeeeeccCCCccccccee
Confidence            7544      12223344567777766544  88999999999999875432211             112334556777


Q ss_pred             EeccCCCceeEEEEeCCCcEEEEecCCCh
Q psy7057         246 LKSANEQEIGGVKVSDDGIVRVFSANPDR  274 (557)
Q Consensus       246 l~~~~~~~~~~vs~s~DG~IrvW~~~~~~  274 (557)
                      +.+.+... .+++|+.||.|+|||+...+
T Consensus       257 l~~sp~~~-~lasg~~Dg~v~vWD~~~~~  284 (342)
T d1yfqa_         257 IEFSPRHK-FLYTAGSDGIISCWNLQTRK  284 (342)
T ss_dssp             EEECTTTC-CEEEEETTSCEEEEETTTTE
T ss_pred             EEecCCcc-EEEEECCCCEEEEEECCCCc
Confidence            88877655 58999999999999987653

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.85  E-value=7.8e-21  Score=190.14  Aligned_cols=257  Identities=11%  Similarity=0.049  Sum_probs=192.4

Q ss_pred             cCcccEEEEEEcCCCc-EEEEECC--CcEEEEcCCC---------------CCCCCCCCEEEEEECCCeEEEEECCCCeE
Q psy7057          10 GHSMDVRSLSVTPDGC-ILSASRD--KSAKLWKPND---------------LSPGAKVNTLLSASWDMTAKLWCLESQQC   71 (557)
Q Consensus        10 gH~~~V~~l~~spdg~-l~sgs~D--g~V~iWd~~~---------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~   71 (557)
                      +|...|++++|+|||+ |++++.+  ..|++||..+               +.++|++.+|++++.++.+++|++.++++
T Consensus        40 ~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~  119 (360)
T d1k32a3          40 PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKP  119 (360)
T ss_dssp             SCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCE
T ss_pred             cCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCCcEEEeeCCCceEEeeeecccccccceeccccccccccccccce
Confidence            6999999999999998 6665544  3799999877               67889999999999999999999999999


Q ss_pred             EEEEcccCCcEEEEEEcCCC-EEEEEE----------CCCeEEEEeCCCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECC
Q psy7057          72 KLTIRQHEMAVWGVIQLANG-IIVTGC----------ADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSND  139 (557)
Q Consensus        72 ~~~l~~h~~~V~~l~~~~~~-~l~sgs----------~dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~D  139 (557)
                      ...+..|...+.+++|+|+| .|+.++          .++.+++|+........+..|...+.+++++|+++ |++++.|
T Consensus       120 ~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~s~~  199 (360)
T d1k32a3         120 TVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYR  199 (360)
T ss_dssp             EEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEESC
T ss_pred             eeeeecccccccchhhccceeeeeeeccccccceeeccccceeeeccccCceeeecccccccccccccCCCCEEEEEeCC
Confidence            99999999999999999999 665433          45569999977777777777888999999999987 7799999


Q ss_pred             CeEEEEECCCCeE-------EEEEeCCCCcEEEEEE--cCCEEEEEeCCC---eEEEEE--CCCC--ceEeeCCccEEEE
Q psy7057         140 ASIRVWDSTTGKC-------VHTMYGHPNFIYSVAA--HGDLITSGGEDQ---CVCVYQ--NKAQ--NSFMIPAMSVWAV  203 (557)
Q Consensus       140 g~I~vwd~~~~~~-------~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg---~I~iwd--~~~~--~~~~~~~~~v~~v  203 (557)
                      +.+++|+......       ...+..|...+..+.+  ++..+.++..+.   ..++|.  ....  ..+..+...+..+
T Consensus       200 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (360)
T d1k32a3         200 SLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIY  279 (360)
T ss_dssp             CCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEE
T ss_pred             CceEcccccccceeeccccceEEEecccCccccceECCCcCcccccceeecccccceeecccCcCceeEeeecCCCceEE
Confidence            9999999765432       2333334443333333  333343333221   122333  3332  4555566667777


Q ss_pred             EEcCCCc----EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCC
Q psy7057         204 AILPNSD----IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPD  273 (557)
Q Consensus       204 ~~~p~g~----l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~  273 (557)
                      .+.+.+.    +++++.++.|++||+.+.+..      .+.+.+..+.+.++.. .+++++.||.|++|+++.+
T Consensus       280 ~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~------~~~~~v~~~~~SpDG~-~l~~~~~Dg~i~v~d~~~~  346 (360)
T d1k32a3         280 SVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVT------EVKNNLTDLRLSADRK-TVMVRKDDGKIYTFPLEKP  346 (360)
T ss_dssp             ECCCCCSHHHHHHCCCCCEEEEEEETTTCCEE------EEEEEEEEEEECTTSC-EEEEEETTSCEEEEESSCT
T ss_pred             EEEecCCCeeEEEecCCCCEEEEEECCCCeEE------EecCCcCEEEECCCCC-EEEEEECCCeEEEEECCCC
Confidence            7766654    678888999999999876542      3456678888877654 5799999999999998765

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.81  E-value=7.7e-19  Score=182.13  Aligned_cols=272  Identities=13%  Similarity=0.056  Sum_probs=186.7

Q ss_pred             cEEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC---------------------CCCCCCCCEEEE-EECC
Q psy7057           2 YKLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND---------------------LSPGAKVNTLLS-ASWD   58 (557)
Q Consensus         2 ~kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~---------------------~~~~~~~~~l~s-gs~D   58 (557)
                      .+++.+|..|. .+..++|||||+ |++++.|++|++||+.+                     ..++|+++++++ +..+
T Consensus        52 ~~~~~~l~~g~-~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~~~~~~~~~s~~~spDG~~l~v~~~~~  130 (426)
T d1hzua2          52 KKIVKVIDTGY-AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWP  130 (426)
T ss_dssp             CSEEEEEECCS-SEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEES
T ss_pred             CcEEEEEeCCC-CeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEEEEEeCCCCCcceEEeeeecCCCCEEEEeecCC
Confidence            56788898874 699999999999 88999999999999875                     466788998754 5588


Q ss_pred             CeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC--EEEEEECC-----------CeEEEEeC-CCc-EEEEEeCCCCCEE
Q psy7057          59 MTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG--IIVTGCAD-----------KTIKLHSE-EGE-FLKTLTGHTDCVR  123 (557)
Q Consensus        59 g~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~--~l~sgs~d-----------g~I~vwd~-~~~-~~~~l~~h~~~V~  123 (557)
                      +++++||..++.+...+..|...+..+.+.+++  ..+.++.|           +.+.+++. ... ......++...+.
T Consensus       131 ~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  210 (426)
T d1hzua2         131 PQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLA  210 (426)
T ss_dssp             SEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECSSSSSCEEEEEECCSSEE
T ss_pred             CeEEEEcCCccceeEEeeccCCCccceeecCCCceeEEEECCCCCEEEEecCCCCeEEEEEeccccceeeEEeccCCccE
Confidence            999999999999888887665444333333333  23333333           34444431 111 1233446778899


Q ss_pred             EEEEeCCCeE-E-EEECCCeEEEEECCCCeEEEEEeCC--CCcEEEEE--EcCC---EEEEEeCCCeEEEEECCCC----
Q psy7057         124 GLAVLNDTDF-V-SCSNDASIRVWDSTTGKCVHTMYGH--PNFIYSVA--AHGD---LITSGGEDQCVCVYQNKAQ----  190 (557)
Q Consensus       124 ~l~~~~~~~l-v-s~s~Dg~I~vwd~~~~~~~~~~~~h--~~~V~~l~--~~~~---~l~s~s~Dg~I~iwd~~~~----  190 (557)
                      .+.++|++++ + +...+..+.+++..+++.+..+...  ........  ..+.   ..++.+.|+.+.+|+....    
T Consensus       211 ~~~~~~~g~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~~~~~~~~~~~  290 (426)
T d1hzua2         211 DGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQ  290 (426)
T ss_dssp             EEEECTTSCEEEEEETTCSEEEEEETTTTEEEEEEECSSCCCCSCCEEEEETTTEEEEEEECTTTCEEEEEECCTTTCTT
T ss_pred             eeeECCCCcEEEeeeecccceeeeecccccEEEEeccCCcccccceeeeecCCCCceEEeccCCCceEEEeecccccccc
Confidence            9999999873 3 5556778999999999988777532  22222222  2222   2233456788888874321    


Q ss_pred             ------ceEeeCCccEEEEEEcCCCc-EEE-------EEcCCcEEEEecCCCCcchh----HH---HhcccceeEEEecc
Q psy7057         191 ------NSFMIPAMSVWAVAILPNSD-IVT-------GSSDGIVRVFSANPDRQAED----AV---QAQYAEEVKKLKSA  249 (557)
Q Consensus       191 ------~~~~~~~~~v~~v~~~p~g~-l~s-------g~~Dg~I~iwd~~~~~~~~~----~~---~~~~~~~v~~l~~~  249 (557)
                            ..+.+|...++.++|+|+++ +++       ++.|++|+|||+.+.+....    ..   +..+...+..+.+.
T Consensus       291 ~~~~~~~~l~g~~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~vwd~~t~~~~~~~~~~~~~~~~~~~~~rv~~~~fS  370 (426)
T d1hzua2         291 YAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYN  370 (426)
T ss_dssp             TBTSEEEEEECSSSCCCCEECCTTCSEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCCEEEEEEC
T ss_pred             ccceEeEEEecCCCceeEEEcCCCCceEEEeecCCCCcccCCEEEEEECCCCCcCeEEeccchhcccCCCCccEEEEEEC
Confidence                  56778888999999999999 553       45688999999987754321    11   12334457777788


Q ss_pred             CCCceeEEEE----eCCCcEEEEecCCCh
Q psy7057         250 NEQEIGGVKV----SDDGIVRVFSANPDR  274 (557)
Q Consensus       250 ~~~~~~~vs~----s~DG~IrvW~~~~~~  274 (557)
                      ++....++++    +.||.|+|||..+.+
T Consensus       371 pDGk~i~vs~~~~~~~~~~i~v~D~~T~k  399 (426)
T d1hzua2         371 KRGDEVWFSVWNGKNDSSALVVVDDKTLK  399 (426)
T ss_dssp             SSSSEEEEEECCCTTSCCEEEEEETTTTE
T ss_pred             CCCCEEEEEEecCCCCCCeEEEEECCCCe
Confidence            8877666665    468999999987653

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.80  E-value=3.5e-17  Score=158.94  Aligned_cols=244  Identities=12%  Similarity=0.109  Sum_probs=184.1

Q ss_pred             EEEEECCCcEEEEcCCC---------------CCCCCCCCEE-EEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcC
Q psy7057          26 ILSASRDKSAKLWKPND---------------LSPGAKVNTL-LSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLA   89 (557)
Q Consensus        26 l~sgs~Dg~V~iWd~~~---------------~~~~~~~~~l-~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~   89 (557)
                      +++++.|++|.+||+.+               ++++|++++| ++++.+++|++||+.+++.+.++..|.. +..+++++
T Consensus         5 yV~~~~~~~v~v~D~~t~~~~~~i~~g~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~~~~~~~~~~~-~~~~~~~~   83 (301)
T d1l0qa2           5 YIANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSS-PQGVAVSP   83 (301)
T ss_dssp             EEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSS-EEEEEECT
T ss_pred             EEEECCCCEEEEEECCCCeEEEEEECCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCceeeeeecccc-cccccccc
Confidence            45778999999999887               6788899987 4667889999999999999999987764 57899999


Q ss_pred             CC--EEEEEECCCeEEEEeCC-CcEEEEEeCCCCCEEEEEEeCCCe--EEEEECCCeEEEEECCCCeEEEEEeCCCCcEE
Q psy7057          90 NG--IIVTGCADKTIKLHSEE-GEFLKTLTGHTDCVRGLAVLNDTD--FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIY  164 (557)
Q Consensus        90 ~~--~l~sgs~dg~I~vwd~~-~~~~~~l~~h~~~V~~l~~~~~~~--lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~  164 (557)
                      ++  .++++..++.+.+|+.. ++....+. +...+.+++++|++.  ++++..++.+.+|+..+++.+..+..+ ..+.
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  161 (301)
T d1l0qa2          84 DGKQVYVTNMASSTLSVIDTTSNTVAGTVK-TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSPK  161 (301)
T ss_dssp             TSSEEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSEE
T ss_pred             ccccccccccccceeeecccccceeeeecc-ccccceEEEeecCCCeeeeeeccccceeeeeccccceeeecccC-CCce
Confidence            88  56667778899999954 45555555 456678899999976  346777899999999999988888754 4567


Q ss_pred             EEEE--cCCEEEEEeC-CCeEEEEECCCC--ceEeeCCccEEEEEEcCCCc-EEEEE---cCCcEEEEecCCCCcchhHH
Q psy7057         165 SVAA--HGDLITSGGE-DQCVCVYQNKAQ--NSFMIPAMSVWAVAILPNSD-IVTGS---SDGIVRVFSANPDRQAEDAV  235 (557)
Q Consensus       165 ~l~~--~~~~l~s~s~-Dg~I~iwd~~~~--~~~~~~~~~v~~v~~~p~g~-l~sg~---~Dg~I~iwd~~~~~~~~~~~  235 (557)
                      ++.+  ++..+++++. ++.+.+|+....  .........+..+++++++. +++++   .++.|++||..+.+......
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~v~v~D~~t~~~~~~~~  241 (301)
T d1l0qa2         162 GIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIP  241 (301)
T ss_dssp             EEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEE
T ss_pred             EEEeeccccceeeecccccccccccccceeeeecccccCCcceeeccccccccccccccceeeeeeeeecCCCeEEEEEc
Confidence            7777  5666666665 467777876655  22233445678899999998 44433   34789999998876543221


Q ss_pred             HhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCChh
Q psy7057         236 QAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPDRQ  275 (557)
Q Consensus       236 ~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~~~  275 (557)
                         ....+..+.+.++....+++++.|+.|+|||+.+++.
T Consensus       242 ---~~~~~~~va~spdg~~l~va~~~~~~i~v~D~~t~~~  278 (301)
T d1l0qa2         242 ---VGPDPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTI  278 (301)
T ss_dssp             ---CCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred             ---CCCCEEEEEEeCCCCEEEEEECCCCeEEEEECCCCeE
Confidence               2234677888888776678999999999999887643

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.77  E-value=3.2e-17  Score=170.41  Aligned_cols=265  Identities=14%  Similarity=0.048  Sum_probs=178.3

Q ss_pred             cEEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC---------------------CCCCCCCCEE-EEEECC
Q psy7057           2 YKLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND---------------------LSPGAKVNTL-LSASWD   58 (557)
Q Consensus         2 ~kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~---------------------~~~~~~~~~l-~sgs~D   58 (557)
                      +++.+++..|. .+..++|||||+ |++++.|++|++||+.+                     ..+++++++| ++++.+
T Consensus        52 ~~v~~~~~~g~-~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~~~~~~s~~~SpDG~~l~vs~~~~  130 (432)
T d1qksa2          52 YEIKTVLDTGY-AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWP  130 (432)
T ss_dssp             CCEEEEEECSS-CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEET
T ss_pred             CcEEEEEeCCC-CeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCCCCCCeEEecccCCCCCEEEEEcCCC
Confidence            57888898874 699999999999 88999999999999865                     4567789876 778889


Q ss_pred             CeEEEEECCCCeEEEEEccc-----------CCcEEEEEEcCCC--EEEEEECCCeEEEEeC-CCcEEEEEe-CCCCCEE
Q psy7057          59 MTAKLWCLESQQCKLTIRQH-----------EMAVWGVIQLANG--IIVTGCADKTIKLHSE-EGEFLKTLT-GHTDCVR  123 (557)
Q Consensus        59 g~i~iwd~~~~~~~~~l~~h-----------~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~-~~~~~~~l~-~h~~~V~  123 (557)
                      +++++||..+++++..+..|           ......+.+++++  .+++...++.|.+|+. +.+...... .+...+.
T Consensus       131 ~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~~~~i~~~d~~~~~~~~~~~i~~g~~~~  210 (432)
T d1qksa2         131 PQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLH  210 (432)
T ss_dssp             TEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEE
T ss_pred             CeEEEEeCccccceeeeccCCccccceeccCCCceeEEEECCCCCEEEEEEccCCeEEEEEccCCCcceEEEEcccCccc
Confidence            99999999999988877543           4456778899988  5677778899999994 344433222 4667789


Q ss_pred             EEEEeCCCe-EEEE-ECCCeEEEEECCCCeEEEEEeC-----CCCcEEEEEE-cCC-EEEEE-eCCCeEEEEECCCCceE
Q psy7057         124 GLAVLNDTD-FVSC-SNDASIRVWDSTTGKCVHTMYG-----HPNFIYSVAA-HGD-LITSG-GEDQCVCVYQNKAQNSF  193 (557)
Q Consensus       124 ~l~~~~~~~-lvs~-s~Dg~I~vwd~~~~~~~~~~~~-----h~~~V~~l~~-~~~-~l~s~-s~Dg~I~iwd~~~~~~~  193 (557)
                      +++++|+++ ++++ ..+..+.++|..+++.+..+..     |......... ... ...+. ..++.|.+|...... .
T Consensus       211 ~~~~spdg~~~~va~~~~~~v~v~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~lg~~~v~~~~~~~~~-~  289 (432)
T d1qksa2         211 DGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEG-H  289 (432)
T ss_dssp             EEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTT-C
T ss_pred             cceECCCCCEEEEeccccceEEEeecccceEEEEeccCccccccCcccceecCCCCceecccccCCceEEeccccccc-c
Confidence            999999987 4444 4567899999998888777642     3333334443 222 22222 236778888743321 0


Q ss_pred             eeCCccEEEEEEc-----------------------------------CCCc-EEEEEcCCcEEEEecCCCCcchhHHHh
Q psy7057         194 MIPAMSVWAVAIL-----------------------------------PNSD-IVTGSSDGIVRVFSANPDRQAEDAVQA  237 (557)
Q Consensus       194 ~~~~~~v~~v~~~-----------------------------------p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~  237 (557)
                      ..+...+....++                                   |+++ +++++.|+.+++|++.+..     .+.
T Consensus       290 ~~~~~~v~~~~~~~~g~~~~~~s~p~~~~lw~~~~~~~~~~~~~sv~vpDg~~la~~s~d~~~k~w~~~~~~-----~l~  364 (432)
T d1qksa2         290 PDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWA-----GIT  364 (432)
T ss_dssp             TTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHH-----TCC
T ss_pred             cccccEEEEEEEcCCCCeEEEEecCCccceeecccCCCCCCeeeEEEEEechhhcccccCCceEeccccccc-----ccC
Confidence            1111222233333                                   5555 5666666666666553221     112


Q ss_pred             cccceeEEEeccCCCceeEEEEe----CCCcEEEEecCCC
Q psy7057         238 QYAEEVKKLKSANEQEIGGVKVS----DDGIVRVFSANPD  273 (557)
Q Consensus       238 ~~~~~v~~l~~~~~~~~~~vs~s----~DG~IrvW~~~~~  273 (557)
                      .+...+..+.+.++.....++.-    .||.|+|||..+.
T Consensus       365 ~~~~~v~~~~fS~DG~~v~~S~~~~~~~~g~i~i~D~~T~  404 (432)
T d1qksa2         365 EGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTL  404 (432)
T ss_dssp             SSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTT
T ss_pred             CCCCcEEEeEECCCCCEEEEEEecCCCCCCcEEEEECCCc
Confidence            34455667778777765555542    5789999997765

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.75  E-value=1.4e-15  Score=147.32  Aligned_cols=226  Identities=15%  Similarity=0.169  Sum_probs=167.4

Q ss_pred             cEEEEEeccCcccEEEEEEcCCCc-E-EEEECCCcEEEEcCCC---------------CCCCCCCCEEE-EEECCCeEEE
Q psy7057           2 YKLSTALYGHSMDVRSLSVTPDGC-I-LSASRDKSAKLWKPND---------------LSPGAKVNTLL-SASWDMTAKL   63 (557)
Q Consensus         2 ~kl~~~l~gH~~~V~~l~~spdg~-l-~sgs~Dg~V~iWd~~~---------------~~~~~~~~~l~-sgs~Dg~i~i   63 (557)
                      .++.+++... ..+..++|+|||+ | ++++.++.|++||+.+               +.+.+++..++ ++..++.+.+
T Consensus        22 ~~~~~~i~~g-~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  100 (301)
T d1l0qa2          22 NKVTATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSV  100 (301)
T ss_dssp             TEEEEEEECS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred             CeEEEEEECC-CCceEEEEeCCCCEEEEEECCCCEEEEEECCCCceeeeeeccccccccccccccccccccccccceeee
Confidence            4667777654 4578999999998 5 4677899999999987               44566676555 5556789999


Q ss_pred             EECCCCeEEEEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEeC-CCcEEEEEeCCCCCEEEEEEeCCCe-EEEEE-C
Q psy7057          64 WCLESQQCKLTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHSE-EGEFLKTLTGHTDCVRGLAVLNDTD-FVSCS-N  138 (557)
Q Consensus        64 wd~~~~~~~~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~-~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s-~  138 (557)
                      |+..+++....+..+ ..+.+++++|++  .++++..++.+.+|+. +...+..+. +...+.++.+++++. +++++ .
T Consensus       101 ~~~~~~~~~~~~~~~-~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  178 (301)
T d1l0qa2         101 IDTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVS-VGRSPKGIAVTPDGTKVYVANFD  178 (301)
T ss_dssp             EETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-CCSSEEEEEECTTSSEEEEEETT
T ss_pred             cccccceeeeecccc-ccceEEEeecCCCeeeeeeccccceeeeeccccceeeecc-cCCCceEEEeeccccceeeeccc
Confidence            999999988888755 466789999988  4566777889999994 555555555 445688999999865 55554 4


Q ss_pred             CCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEe---CCCeEEEEECCCCceEe--eCCccEEEEEEcCCCc-
Q psy7057         139 DASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGG---EDQCVCVYQNKAQNSFM--IPAMSVWAVAILPNSD-  210 (557)
Q Consensus       139 Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s---~Dg~I~iwd~~~~~~~~--~~~~~v~~v~~~p~g~-  210 (557)
                      ++.+.+|+....+....+..+ ..+..+++  ++..++.++   .++.|++||..+.+.+.  .....+++++|+|+|+ 
T Consensus       179 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~v~~~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~va~spdg~~  257 (301)
T d1l0qa2         179 SMSISVIDTVTNSVIDTVKVE-AAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDGKK  257 (301)
T ss_dssp             TTEEEEEETTTTEEEEEEECS-SEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCSSEEEEEECTTSSE
T ss_pred             ccccccccccceeeeeccccc-CCcceeeccccccccccccccceeeeeeeeecCCCeEEEEEcCCCCEEEEEEeCCCCE
Confidence            577888888777777776644 45566777  666655443   34689999988773322  2345789999999998 


Q ss_pred             E-EEEEcCCcEEEEecCCCCcc
Q psy7057         211 I-VTGSSDGIVRVFSANPDRQA  231 (557)
Q Consensus       211 l-~sg~~Dg~I~iwd~~~~~~~  231 (557)
                      + ++++.|++|++||+.+++..
T Consensus       258 l~va~~~~~~i~v~D~~t~~~~  279 (301)
T d1l0qa2         258 VYVALSFCNTVSVIDTATNTIT  279 (301)
T ss_dssp             EEEEETTTTEEEEEETTTTEEE
T ss_pred             EEEEECCCCeEEEEECCCCeEE
Confidence            4 57778999999999887644

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.73  E-value=4.5e-17  Score=162.31  Aligned_cols=177  Identities=12%  Similarity=0.000  Sum_probs=142.8

Q ss_pred             CCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCC--eEEEEeCCCcEEEEEeCCCCCEEEE
Q psy7057          49 VNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADK--TIKLHSEEGEFLKTLTGHTDCVRGL  125 (557)
Q Consensus        49 ~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg--~I~vwd~~~~~~~~l~~h~~~V~~l  125 (557)
                      ++++++++ ++.|++|++.++..+. + +|...|.+++|+|+| .|++++.+.  .|++||..+.....+..|...|.++
T Consensus        15 G~~~a~~~-~g~v~v~d~~~~~~~~-~-~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~~~~~~~~~~~v~~~   91 (360)
T d1k32a3          15 GDLIAFVS-RGQAFIQDVSGTYVLK-V-PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAM   91 (360)
T ss_dssp             GGCEEEEE-TTEEEEECTTSSBEEE-C-SCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCEEECCCCCCSEEEE
T ss_pred             CCEEEEEE-CCeEEEEECCCCcEEE-c-cCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCCcEEEeeCCCceEEee
Confidence            44444444 3567777776666554 3 699999999999999 666655443  7999998777788889999999999


Q ss_pred             EEeCCCe-EEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEe----------CCCeEEEEECCCC--
Q psy7057         126 AVLNDTD-FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGG----------EDQCVCVYQNKAQ--  190 (557)
Q Consensus       126 ~~~~~~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s----------~Dg~I~iwd~~~~--  190 (557)
                      +|+|++. +++++.++.+++|++.++++...+..|...+.+++|  ++++|+.++          .++.+++|+....  
T Consensus        92 ~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~~~~~~~~~~~~v~d~~~~~~  171 (360)
T d1k32a3          92 GVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKI  171 (360)
T ss_dssp             EECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEE
T ss_pred             eecccccccceeccccccccccccccceeeeeecccccccchhhccceeeeeeeccccccceeeccccceeeeccccCce
Confidence            9999987 779999999999999999999999999999999999  778887543          3456899998776  


Q ss_pred             ceEeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCC
Q psy7057         191 NSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPD  228 (557)
Q Consensus       191 ~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~  228 (557)
                      ..+..+...+..++|+|+|+ |++++.++.+++|+....
T Consensus       172 ~~~~~~~~~~~~~~~spdg~~l~~~s~~~~~~~~d~~~~  210 (360)
T d1k32a3         172 FAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVL  210 (360)
T ss_dssp             EECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSS
T ss_pred             eeecccccccccccccCCCCEEEEEeCCCceEccccccc
Confidence            44445667789999999999 889999999999987543

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.67  E-value=7.4e-15  Score=144.28  Aligned_cols=201  Identities=12%  Similarity=0.083  Sum_probs=146.0

Q ss_pred             EEEEECCCcEEEEcCCC------------------CCCCCCCCEE-EEEECCCeEEEEECCCCeEEEEEcccCC-----c
Q psy7057          26 ILSASRDKSAKLWKPND------------------LSPGAKVNTL-LSASWDMTAKLWCLESQQCKLTIRQHEM-----A   81 (557)
Q Consensus        26 l~sgs~Dg~V~iWd~~~------------------~~~~~~~~~l-~sgs~Dg~i~iwd~~~~~~~~~l~~h~~-----~   81 (557)
                      +++++.|++|++||+.+                  +.++|+++++ ++++.++.|.+||+.+++.+..+..+..     .
T Consensus         4 ~vt~~~d~~v~v~D~~s~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~   83 (337)
T d1pbyb_           4 ILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKS   83 (337)
T ss_dssp             EEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEEC
T ss_pred             EEEEcCCCEEEEEECCCCeEEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEEecCCCcccccc
Confidence            78999999999999987                  5677888887 5667899999999999999988876543     3


Q ss_pred             EEEEEEcCCC-EEEEEE------------CCCeEEEEeC-CCcEEEEEeCCCCCEEEEEEeCCCe-EEEEECCCeEEEEE
Q psy7057          82 VWGVIQLANG-IIVTGC------------ADKTIKLHSE-EGEFLKTLTGHTDCVRGLAVLNDTD-FVSCSNDASIRVWD  146 (557)
Q Consensus        82 V~~l~~~~~~-~l~sgs------------~dg~I~vwd~-~~~~~~~l~~h~~~V~~l~~~~~~~-lvs~s~Dg~I~vwd  146 (557)
                      +..++++|++ .+++++            .+..+.+||. .+..+..+. +...+.+++++|++. +++++  +.+.+||
T Consensus        84 ~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~--~~~~~~d  160 (337)
T d1pbyb_          84 LFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFE-APRQITMLAWARDGSKLYGLG--RDLHVMD  160 (337)
T ss_dssp             TTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEE-CCSSCCCEEECTTSSCEEEES--SSEEEEE
T ss_pred             eeeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccCCeEEEecc-ccCCceEEEEcCCCCEEEEEc--CCcceee
Confidence            3468999988 665554            4678888994 455555555 456688999999987 44654  4477888


Q ss_pred             CCCCeEEEEEeCC------------------------------------------------------------------C
Q psy7057         147 STTGKCVHTMYGH------------------------------------------------------------------P  160 (557)
Q Consensus       147 ~~~~~~~~~~~~h------------------------------------------------------------------~  160 (557)
                      ..+++...++..+                                                                  .
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (337)
T d1pbyb_         161 PEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMD  240 (337)
T ss_dssp             TTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECS
T ss_pred             eecCcEEEEeecCCccccceecCCcceeeccccccceeeeeeeeeeeccceeeecccCccEEEEEcCCCcEEEEEecCCC
Confidence            8777666554221                                                                  1


Q ss_pred             CcEEEEEE--cCCEEEEEeCCCeEEEEECCCCceE--eeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcc
Q psy7057         161 NFIYSVAA--HGDLITSGGEDQCVCVYQNKAQNSF--MIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQA  231 (557)
Q Consensus       161 ~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~~~~--~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~  231 (557)
                      ..+.++.+  ++.++++  .++.|++||+.+.+.+  ..+...+.+++|+|+|+ +++++.|++|+|||..+.+..
T Consensus       241 ~~~~~~~~~~~~~~~~~--~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dG~~l~v~~~~~~i~v~D~~t~~~v  314 (337)
T d1pbyb_         241 VFYFSTAVNPAKTRAFG--AYNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKK  314 (337)
T ss_dssp             SCEEEEEECTTSSEEEE--EESEEEEEETTTTEEEEEEECSSCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEE
T ss_pred             cceEEEEecccceEEEE--ccccEEEEECCCCcEEEEEcCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCcEE
Confidence            11222223  2233333  3578999998877322  23556789999999998 889999999999999887644

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=99.61  E-value=1.3e-14  Score=143.14  Aligned_cols=250  Identities=8%  Similarity=-0.024  Sum_probs=171.4

Q ss_pred             EEEcCCCc-EEEEECCCcEEEEcCCC-----------------CCCCCCCCEE-EEEECCCeEEEEECCCCeEEEEEccc
Q psy7057          18 LSVTPDGC-ILSASRDKSAKLWKPND-----------------LSPGAKVNTL-LSASWDMTAKLWCLESQQCKLTIRQH   78 (557)
Q Consensus        18 l~~spdg~-l~sgs~Dg~V~iWd~~~-----------------~~~~~~~~~l-~sgs~Dg~i~iwd~~~~~~~~~l~~h   78 (557)
                      ++|+++++ |++++.+++|.+||+.+                 +.++|++.++ ++++.++.|++||+.+++.+..+...
T Consensus         2 ~a~~~~~~~l~~~~~~~~v~v~D~~t~~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~~~~~~~   81 (346)
T d1jmxb_           2 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLS   81 (346)
T ss_dssp             CCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESC
T ss_pred             ccCCCCCcEEEEEcCCCEEEEEECCCCCEEEEEEcCCCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCeeeeeeccc
Confidence            47889998 88999999999999987                 5677888887 55567899999999999988877543


Q ss_pred             C------CcEEEEEEcCCC-EEEEEE------------CCCeEEEEeC-CCcEEEEEe--CCCCCEEEEEEeCCCeEEEE
Q psy7057          79 E------MAVWGVIQLANG-IIVTGC------------ADKTIKLHSE-EGEFLKTLT--GHTDCVRGLAVLNDTDFVSC  136 (557)
Q Consensus        79 ~------~~V~~l~~~~~~-~l~sgs------------~dg~I~vwd~-~~~~~~~l~--~h~~~V~~l~~~~~~~lvs~  136 (557)
                      .      ..+..++++|+| .+++++            .++.+.+|+. ++.....+.  .....+..+.+++++.++..
T Consensus        82 ~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (346)
T d1jmxb_          82 SVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVA  161 (346)
T ss_dssp             CSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSCEEEE
T ss_pred             ccccccCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEecccceeeeEEEeeeccCceEEEEecCCCEEEEe
Confidence            2      235578999998 555443            4677888883 333222221  12345666677777876655


Q ss_pred             ECCCeEEEEECCCCeEEEEEeCCCCc---------------------EEEE--EE----cCCEEEEEeCCCeEEEEECCC
Q psy7057         137 SNDASIRVWDSTTGKCVHTMYGHPNF---------------------IYSV--AA----HGDLITSGGEDQCVCVYQNKA  189 (557)
Q Consensus       137 s~Dg~I~vwd~~~~~~~~~~~~h~~~---------------------V~~l--~~----~~~~l~s~s~Dg~I~iwd~~~  189 (557)
                      +  ..+.+|++.+++.+..+..+...                     +...  ..    ....+.++..+..+.+|+...
T Consensus       162 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (346)
T d1jmxb_         162 G--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKT  239 (346)
T ss_dssp             S--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTT
T ss_pred             C--CcceEEEccCCCEEEEEecCCCccceEEeccccEEEEEecCCCceEeeeeeeeeccCceeEeeccCCceEEEEECCC
Confidence            4  56899999999988887643211                     0000  00    122344555667788999766


Q ss_pred             C----ceEeeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCc
Q psy7057         190 Q----NSFMIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGI  264 (557)
Q Consensus       190 ~----~~~~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~  264 (557)
                      .    .....+...+.++.+++++. ++.. .++.|++||..+.+......   ....+..+.+.++.. .+++++.||.
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~v~d~~~~~~~~~~~---~~~~~~~va~s~DG~-~l~v~~~d~~  314 (346)
T d1jmxb_         240 GKTHTQEFADLTELYFTGLRSPKDPNQIYG-VLNRLAKYDLKQRKLIKAAN---LDHTYYCVAFDKKGD-KLYLGGTFND  314 (346)
T ss_dssp             CCEEEEEEEECSSCEEEEEECSSCTTEEEE-EESEEEEEETTTTEEEEEEE---CSSCCCEEEECSSSS-CEEEESBSSE
T ss_pred             CceEEEEeecccceeEEEEEeCCCCEEEEe-cCCeEEEEECCCCcEEEEEc---CCCCEEEEEEcCCCC-EEEEEeCCCc
Confidence            5    33445677889999999888 5444 45679999998876543322   223466777777655 5677889999


Q ss_pred             EEEEecCCCh
Q psy7057         265 VRVFSANPDR  274 (557)
Q Consensus       265 IrvW~~~~~~  274 (557)
                      |+|||..+.+
T Consensus       315 v~v~D~~t~~  324 (346)
T d1jmxb_         315 LAVFNPDTLE  324 (346)
T ss_dssp             EEEEETTTTE
T ss_pred             EEEEECccCC
Confidence            9999987653

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.60  E-value=1.1e-13  Score=135.69  Aligned_cols=216  Identities=14%  Similarity=0.112  Sum_probs=155.7

Q ss_pred             CEEEEEECCCeEEEEECCCCeEEEEEccc--CCcEEEEEEcCCC-E-EEEEECCCeEEEEe-CCCcEEEEEeCCCC----
Q psy7057          50 NTLLSASWDMTAKLWCLESQQCKLTIRQH--EMAVWGVIQLANG-I-IVTGCADKTIKLHS-EEGEFLKTLTGHTD----  120 (557)
Q Consensus        50 ~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h--~~~V~~l~~~~~~-~-l~sgs~dg~I~vwd-~~~~~~~~l~~h~~----  120 (557)
                      +++++++.|++|++||+.+++.+.++..+  ...+.+++++|+| . +++++.++.|.+|| .+++.+..+..+..    
T Consensus         2 ~~~vt~~~d~~v~v~D~~s~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~   81 (337)
T d1pbyb_           2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV   81 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred             eEEEEEcCCCEEEEEECCCCeEEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEEecCCCcccc
Confidence            57999999999999999999999988653  4567899999998 4 46778899999999 57788887766543    


Q ss_pred             -CEEEEEEeCCCe-EEEEE------------CCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEE
Q psy7057         121 -CVRGLAVLNDTD-FVSCS------------NDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCV  184 (557)
Q Consensus       121 -~V~~l~~~~~~~-lvs~s------------~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~i  184 (557)
                       .+..++++|++. +++++            .+..+.+||..+++.+..+.. ...+.++++  +++++++++.+  +.+
T Consensus        82 ~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~--~~~  158 (337)
T d1pbyb_          82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGLGRD--LHV  158 (337)
T ss_dssp             ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEESSS--EEE
T ss_pred             cceeeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccCCeEEEeccc-cCCceEEEEcCCCCEEEEEcCC--cce
Confidence             345788999976 43443            467899999999999888874 445667777  67788887654  455


Q ss_pred             EECCCCc---------------------------------------------------------------------eEee
Q psy7057         185 YQNKAQN---------------------------------------------------------------------SFMI  195 (557)
Q Consensus       185 wd~~~~~---------------------------------------------------------------------~~~~  195 (557)
                      ||.....                                                                     .+..
T Consensus       159 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (337)
T d1pbyb_         159 MDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRI  238 (337)
T ss_dssp             EETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEE
T ss_pred             eeeecCcEEEEeecCCccccceecCCcceeeccccccceeeeeeeeeeeccceeeecccCccEEEEEcCCCcEEEEEecC
Confidence            6633220                                                                     0111


Q ss_pred             CCccEEEEEEcCCCcEEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCCC
Q psy7057         196 PAMSVWAVAILPNSDIVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANPD  273 (557)
Q Consensus       196 ~~~~v~~v~~~p~g~l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~~  273 (557)
                      +...+..++++|++.++.+ .++.|++||+.+.+......   +...+..+.+.++.. .+++++.||.|+|||..+.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~-~~~~i~v~d~~~~~~~~~~~---~~~~~~~~~~s~dG~-~l~v~~~~~~i~v~D~~t~  311 (337)
T d1pbyb_         239 MDVFYFSTAVNPAKTRAFG-AYNVLESFDLEKNASIKRVP---LPHSYYSVNVSTDGS-TVWLGGALGDLAAYDAETL  311 (337)
T ss_dssp             CSSCEEEEEECTTSSEEEE-EESEEEEEETTTTEEEEEEE---CSSCCCEEEECTTSC-EEEEESBSSEEEEEETTTC
T ss_pred             CCcceEEEEecccceEEEE-ccccEEEEECCCCcEEEEEc---CCCCEEEEEECCCCC-EEEEEeCCCcEEEEECCCC
Confidence            2223455667777764433 36899999999877654332   334566777776655 4677899999999998765

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.58  E-value=6.4e-14  Score=145.07  Aligned_cols=180  Identities=9%  Similarity=-0.064  Sum_probs=137.2

Q ss_pred             EEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeC-CCc--EEEEEe---CCCCCEE
Q psy7057          51 TLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSE-EGE--FLKTLT---GHTDCVR  123 (557)
Q Consensus        51 ~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~-~~~--~~~~l~---~h~~~V~  123 (557)
                      ++++.+.+++|.|||..+++++..+..|. .+..++|+|+| ++++++.|+++++||. +++  .+..+.   +|.+.+.
T Consensus        34 ~~v~~~d~g~v~v~D~~t~~v~~~~~~g~-~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~~~~~~  112 (432)
T d1qksa2          34 FSVTLRDAGQIALIDGSTYEIKTVLDTGY-AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIET  112 (432)
T ss_dssp             EEEEETTTTEEEEEETTTCCEEEEEECSS-CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEE
T ss_pred             EEEEEcCCCEEEEEECCCCcEEEEEeCCC-CeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCCCCCCeEE
Confidence            46899999999999999999999998774 68999999999 8899999999999994 333  233332   4555566


Q ss_pred             EEEEeCCCe-E-EEEECCCeEEEEECCCCeEEEEEeCC-----------CCcEEEEEE--cCCE-EEEEeCCCeEEEEEC
Q psy7057         124 GLAVLNDTD-F-VSCSNDASIRVWDSTTGKCVHTMYGH-----------PNFIYSVAA--HGDL-ITSGGEDQCVCVYQN  187 (557)
Q Consensus       124 ~l~~~~~~~-l-vs~s~Dg~I~vwd~~~~~~~~~~~~h-----------~~~V~~l~~--~~~~-l~s~s~Dg~I~iwd~  187 (557)
                      +..|+|+|+ + ++++.+++|++||..+++++..+..|           ......+.+  ++.. +++...++.|.+|+.
T Consensus       113 s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~~~~i~~~d~  192 (432)
T d1qksa2         113 SKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDY  192 (432)
T ss_dssp             CCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEET
T ss_pred             ecccCCCCCEEEEEcCCCCeEEEEeCccccceeeeccCCccccceeccCCCceeEEEECCCCCEEEEEEccCCeEEEEEc
Confidence            666778886 3 58889999999999999999887654           234456666  5554 567778899999997


Q ss_pred             CCCce---Ee-eCCccEEEEEEcCCCc-EEEEE-cCCcEEEEecCCCCcc
Q psy7057         188 KAQNS---FM-IPAMSVWAVAILPNSD-IVTGS-SDGIVRVFSANPDRQA  231 (557)
Q Consensus       188 ~~~~~---~~-~~~~~v~~v~~~p~g~-l~sg~-~Dg~I~iwd~~~~~~~  231 (557)
                      .....   .. .+...+..++++|+|+ +++++ .++.+.+++....+..
T Consensus       193 ~~~~~~~~~~i~~g~~~~~~~~spdg~~~~va~~~~~~v~v~d~~~~~~~  242 (432)
T d1qksa2         193 TDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLV  242 (432)
T ss_dssp             TCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEE
T ss_pred             cCCCcceEEEEcccCccccceECCCCCEEEEeccccceEEEeecccceEE
Confidence            66522   22 3455789999999998 55554 5678999998776543

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=99.56  E-value=1.8e-12  Score=129.86  Aligned_cols=262  Identities=10%  Similarity=-0.021  Sum_probs=176.1

Q ss_pred             ccCcccEEEEEEcCCCc-EEEE-----ECCCcEEEEcCCC--------------CCCCCCCCEEEEEE----------CC
Q psy7057           9 YGHSMDVRSLSVTPDGC-ILSA-----SRDKSAKLWKPND--------------LSPGAKVNTLLSAS----------WD   58 (557)
Q Consensus         9 ~gH~~~V~~l~~spdg~-l~sg-----s~Dg~V~iWd~~~--------------~~~~~~~~~l~sgs----------~D   58 (557)
                      .+|.+++.+++++|||+ ++..     +..+.|.+||..+              +.++|++.+|++++          .+
T Consensus        17 ~~~~~p~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~tg~~~~~~~~~~~~~~a~SpDG~~l~va~~~~~~~~~~~~~   96 (373)
T d2madh_          17 GAADGPTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLPNPVAAHSGSEFALASTSFSRIAKGKRT   96 (373)
T ss_pred             ccCCCCccccccCCCCCEEEEEcccccCCCceEEEEECCCCCEEEEEeCCCCccEEEcCCCCEEEEEeecCCcccccccc
Confidence            46889999999999998 5432     3456789998766              67889999998875          45


Q ss_pred             CeEEEEECCCCeEEEEEcccCCcEEE-------EEEcCCC-E--EEEEECCCeEEEEeCCCcEEEEEeCCCCCEEEEEEe
Q psy7057          59 MTAKLWCLESQQCKLTIRQHEMAVWG-------VIQLANG-I--IVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVL  128 (557)
Q Consensus        59 g~i~iwd~~~~~~~~~l~~h~~~V~~-------l~~~~~~-~--l~sgs~dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~  128 (557)
                      +.|.+||+.+++.+..+..+......       +.|++++ .  +.....++.+.+|+......   ..+.....++.++
T Consensus        97 ~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~s  173 (373)
T d2madh_          97 DYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQGGSSD---DQLLSSPTCYHIH  173 (373)
T ss_pred             eEEEEEECCCCcEEEEEecCCcceeEeccCCCcEEEEeCCCcEEEEEEcCCCceEEeeccCCeE---EEEeccceeEEEe
Confidence            78999999999998888777655543       4566665 2  22333455677776433222   2233456788899


Q ss_pred             CCCe--EEEEECCCeEEEEECCCCeEEEEEeCCC------CcEEEEEEcC-CEEEEEeCCCeEEEEECCCCce-----Ee
Q psy7057         129 NDTD--FVSCSNDASIRVWDSTTGKCVHTMYGHP------NFIYSVAAHG-DLITSGGEDQCVCVYQNKAQNS-----FM  194 (557)
Q Consensus       129 ~~~~--lvs~s~Dg~I~vwd~~~~~~~~~~~~h~------~~V~~l~~~~-~~l~s~s~Dg~I~iwd~~~~~~-----~~  194 (557)
                      |++.  +++.+.|+++.+|+...++.......+.      .....+.+.+ ..++..+.++.+.+|+......     ..
T Consensus       174 ~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~  253 (373)
T d2madh_         174 PGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPID  253 (373)
T ss_pred             cCCCcEEEEEcCCCeEEEEEcCCceeeEEEeeeccccCccceeeeEEECCCceEEEecCCceEEEEEcCCCeEEEEEeec
Confidence            8865  6789999999999998887776654322      2233344433 3566777889999998654411     11


Q ss_pred             eC----------CccEEEEEEcCCCc-----------EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCc
Q psy7057         195 IP----------AMSVWAVAILPNSD-----------IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQE  253 (557)
Q Consensus       195 ~~----------~~~v~~v~~~p~g~-----------l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~  253 (557)
                      ..          ......+++++++.           +++.+.++.+.+||..+++......   +...+..+.+.++..
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~d~~t~~~~~~~~---~~~~~~~~a~spDG~  330 (373)
T d2madh_         254 ALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS---LGHDVDAISVAQDGG  330 (373)
T ss_pred             cccCcEEeeeeccCcceeeEEecCCCeEEEecCCCceEEeecCCCeEEEEECCCCcEEEEec---CCCCeeEEEECCCCC
Confidence            11          11233445555543           4456677889999998877654332   234466777777765


Q ss_pred             e-eEEEEeCCCcEEEEecCCChhh
Q psy7057         254 I-GGVKVSDDGIVRVFSANPDRQA  276 (557)
Q Consensus       254 ~-~~vs~s~DG~IrvW~~~~~~~~  276 (557)
                      . .+++++.|++|+|||+.+++..
T Consensus       331 ~~l~vt~~~d~~v~v~D~~tg~~~  354 (373)
T d2madh_         331 PDLYALSAGTEVLHIYDAGAGDQD  354 (373)
T ss_pred             EEEEEEeCCCCeEEEEECCCCCEE
Confidence            4 4578999999999999887543

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.54  E-value=2.2e-13  Score=140.34  Aligned_cols=224  Identities=10%  Similarity=-0.041  Sum_probs=149.8

Q ss_pred             CCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeC-CCcEE--EEE---eCCCCC
Q psy7057          49 VNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSE-EGEFL--KTL---TGHTDC  121 (557)
Q Consensus        49 ~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~-~~~~~--~~l---~~h~~~  121 (557)
                      .-++++.+.|++|+|||+.+++.+.++..|. .+..++|+|+| ++++++.|+++++||. +++..  ..+   .+|...
T Consensus        32 ~~~~V~~~~dg~v~vwD~~t~~~~~~l~~g~-~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~~~~~~~  110 (426)
T d1hzua2          32 NLFSVTLRDAGQIALVDGDSKKIVKVIDTGY-AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSV  110 (426)
T ss_dssp             GEEEEEETTTTEEEEEETTTCSEEEEEECCS-SEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEE
T ss_pred             eEEEEEEcCCCEEEEEECCCCcEEEEEeCCC-CeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEEEEEeCCCCCcce
Confidence            3456888899999999999999999998775 58999999999 8899999999999994 44432  233   245556


Q ss_pred             EEEEEEeCCCe-E-EEEECCCeEEEEECCCCeEEEEEeCCCCcEEE-----------EEE--cCCEEE-EEeCCCeEEEE
Q psy7057         122 VRGLAVLNDTD-F-VSCSNDASIRVWDSTTGKCVHTMYGHPNFIYS-----------VAA--HGDLIT-SGGEDQCVCVY  185 (557)
Q Consensus       122 V~~l~~~~~~~-l-vs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~-----------l~~--~~~~l~-s~s~Dg~I~iw  185 (557)
                      +.+++|+|+|+ + +++..++++++||..+++++..+..|...+..           +..  ++..++ +....+.+.++
T Consensus       111 ~~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~~~i~~~  190 (426)
T d1hzua2         111 ESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLV  190 (426)
T ss_dssp             EECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEE
T ss_pred             EEeeeecCCCCEEEEeecCCCeEEEEcCCccceeEEeeccCCCccceeecCCCceeEEEECCCCCEEEEecCCCCeEEEE
Confidence            66777788887 3 46678999999999999998888766544322           222  333332 22333445555


Q ss_pred             ECCCC----ceEeeCCccEEEEEEcCCCc-EE-EEEcCCcEEEEecCCCCcchhHHHhccccee--EEEeccCCCceeEE
Q psy7057         186 QNKAQ----NSFMIPAMSVWAVAILPNSD-IV-TGSSDGIVRVFSANPDRQAEDAVQAQYAEEV--KKLKSANEQEIGGV  257 (557)
Q Consensus       186 d~~~~----~~~~~~~~~v~~v~~~p~g~-l~-sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v--~~l~~~~~~~~~~v  257 (557)
                      +....    .....+...+..+.++|+++ ++ +...+..+.+++..+.+..............  .............+
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (426)
T d1hzua2         191 NYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWST  270 (426)
T ss_dssp             ECSSSSSCEEEEEECCSSEEEEEECTTSCEEEEEETTCSEEEEEETTTTEEEEEEECSSCCCCSCCEEEEETTTEEEEEE
T ss_pred             EeccccceeeEEeccCCccEeeeECCCCcEEEeeeecccceeeeecccccEEEEeccCCcccccceeeeecCCCCceEEe
Confidence            53332    23345667889999999998 44 4456778999999877654332222221111  11122222233335


Q ss_pred             EEeCCCcEEEEecCCC
Q psy7057         258 KVSDDGIVRVFSANPD  273 (557)
Q Consensus       258 s~s~DG~IrvW~~~~~  273 (557)
                      +.+.|+.+.+|+....
T Consensus       271 ~~~~d~~v~~~~~~~~  286 (426)
T d1hzua2         271 SHLGDGSISLIGTDPK  286 (426)
T ss_dssp             ECTTTCEEEEEECCTT
T ss_pred             ccCCCceEEEeecccc
Confidence            5668999999987654

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=99.49  E-value=1.4e-12  Score=127.80  Aligned_cols=247  Identities=9%  Similarity=0.081  Sum_probs=163.0

Q ss_pred             EEEEECCCcEEEEcCCC------------------CCCCCCCCEEEEEE-CCCeEEEEECCCCeEEEEE---cccCCcEE
Q psy7057          26 ILSASRDKSAKLWKPND------------------LSPGAKVNTLLSAS-WDMTAKLWCLESQQCKLTI---RQHEMAVW   83 (557)
Q Consensus        26 l~sgs~Dg~V~iWd~~~------------------~~~~~~~~~l~sgs-~Dg~i~iwd~~~~~~~~~l---~~h~~~V~   83 (557)
                      +++++.|++|++|+++.                  ++++|++++|++++ .|++|++|++.......++   ..+...++
T Consensus         7 ~v~~~~~~~I~v~~~~~~~~l~~~~~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~~~~~p~   86 (333)
T d1ri6a_           7 YIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLT   86 (333)
T ss_dssp             EEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCS
T ss_pred             EEECCCCCcEEEEEEcCCCCeEEEEEEcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeecccCCCce
Confidence            46778899999998754                  67888999886655 4899999998765422222   23455677


Q ss_pred             EEEEcCCC-EEEEEE-CCCeEEEEeCCCcE---EEEEeCCCCCEEEEEEeCCCe-EEEE-ECCCeEEEEECCCCeEEEE-
Q psy7057          84 GVIQLANG-IIVTGC-ADKTIKLHSEEGEF---LKTLTGHTDCVRGLAVLNDTD-FVSC-SNDASIRVWDSTTGKCVHT-  155 (557)
Q Consensus        84 ~l~~~~~~-~l~sgs-~dg~I~vwd~~~~~---~~~l~~h~~~V~~l~~~~~~~-lvs~-s~Dg~I~vwd~~~~~~~~~-  155 (557)
                      .++|+|+| .|++++ .++.+.+|+.....   ......+...+.++.++|++. ++++ ..+..|.+|+......... 
T Consensus        87 ~l~~spDg~~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~  166 (333)
T d1ri6a_          87 HISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQ  166 (333)
T ss_dssp             EEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEE
T ss_pred             EEEEcCCCCEEeecccCCCceeeeccccccceecccccCCCccceEEEeeecceeeeccccccceeeEEEeccCCcceee
Confidence            89999999 677766 47789999843322   333456777889999999977 4444 4567799999765432211 


Q ss_pred             -----EeCCCCcEEEEEE--cCCEEE-EEeCCCeEEEEECCCC-------ceEee------CCccEEEEEEcCCCc--EE
Q psy7057         156 -----MYGHPNFIYSVAA--HGDLIT-SGGEDQCVCVYQNKAQ-------NSFMI------PAMSVWAVAILPNSD--IV  212 (557)
Q Consensus       156 -----~~~h~~~V~~l~~--~~~~l~-s~s~Dg~I~iwd~~~~-------~~~~~------~~~~v~~v~~~p~g~--l~  212 (557)
                           ...+....+.+++  ++..++ +....+...+|+....       ..+..      .......++++++++  ++
T Consensus       167 ~~~~~~~~~g~~p~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~~~  246 (333)
T d1ri6a_         167 DPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYA  246 (333)
T ss_dssp             EEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEE
T ss_pred             eceeeeeecCCCccEEEEeccceeEEeeccccCceEEEeecccccceeeeeeeeeeecCCCccccceeEEEecccCceee
Confidence                 1234456678888  455554 4456677888874322       11111      123567788999998  55


Q ss_pred             EEEcCCcEEEEecCCCCcchh-HHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecCC
Q psy7057         213 TGSSDGIVRVFSANPDRQAED-AVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSANP  272 (557)
Q Consensus       213 sg~~Dg~I~iwd~~~~~~~~~-~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~~  272 (557)
                      ++..++.+++|++........ ............+.+.++....+++++.++.|+||+++.
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~spDGk~l~va~~~~~~v~v~~id~  307 (333)
T d1ri6a_         247 CDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVG  307 (333)
T ss_dssp             EETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEET
T ss_pred             ecccCCeEEEEEEcCCCCEEEEEEEeCCCCCeeEEEEeCCCCEEEEEECCCCeEEEEEEEC
Confidence            666788999999876543211 111112234456777787776667777889999998764

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=99.48  E-value=1.4e-11  Score=123.09  Aligned_cols=224  Identities=11%  Similarity=0.024  Sum_probs=146.8

Q ss_pred             EEEEEeccCcccEEEEEEcCCCc-EEEEE----------CCCcEEEEcCCC-----------------------CCCCCC
Q psy7057           3 KLSTALYGHSMDVRSLSVTPDGC-ILSAS----------RDKSAKLWKPND-----------------------LSPGAK   48 (557)
Q Consensus         3 kl~~~l~gH~~~V~~l~~spdg~-l~sgs----------~Dg~V~iWd~~~-----------------------~~~~~~   48 (557)
                      ++..++.++...  .++|+|||+ |++++          .++.|.+||..+                       +.++++
T Consensus        58 ~~~~~~~~~~~~--~~a~SpDG~~l~va~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~d  135 (373)
T d2madh_          58 SILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPN  135 (373)
T ss_pred             CEEEEEeCCCCc--cEEEcCCCCEEEEEeecCCcccccccceEEEEEECCCCcEEEEEecCCcceeEeccCCCcEEEEeC
Confidence            556677766544  799999998 66553          468899999987                       123334


Q ss_pred             CCEEEEEE--CCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEeCC-CcEEEEEeC------
Q psy7057          49 VNTLLSAS--WDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHSEE-GEFLKTLTG------  117 (557)
Q Consensus        49 ~~~l~sgs--~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~~-~~~~~~l~~------  117 (557)
                      +..++...  .++.+.+|+..+.+...    +.....++.++|++  .+++.+.|+.+.+|+.. +........      
T Consensus       136 g~~~~v~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~  211 (373)
T d2madh_         136 NADLLFFQFAAGPAVGLVVQGGSSDDQ----LLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAA  211 (373)
T ss_pred             CCcEEEEEEcCCCceEEeeccCCeEEE----EeccceeEEEecCCCcEEEEEcCCCeEEEEEcCCceeeEEEeeeccccC
Confidence            44444333  34566677766655433    33346678889987  67899999999999944 333333322      


Q ss_pred             CCCCEEEEEEeCCCeEEEEECCCeEEEEECCCCeEEE--EEeCCCCc----------EEEEEE------------cCCEE
Q psy7057         118 HTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVH--TMYGHPNF----------IYSVAA------------HGDLI  173 (557)
Q Consensus       118 h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~~~~--~~~~h~~~----------V~~l~~------------~~~~l  173 (557)
                      +......+.+.+++.++..+.++.+.+|+..+.....  .+..+...          ...+++            .+..+
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~  291 (373)
T d2madh_         212 QNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAW  291 (373)
T ss_pred             ccceeeeEEECCCceEEEecCCceEEEEEcCCCeEEEEEeeccccCcEEeeeeccCcceeeEEecCCCeEEEecCCCceE
Confidence            2222345556677778888899999999987664322  22111111          111111            33455


Q ss_pred             EEEeCCCeEEEEECCCCceE--eeCCccEEEEEEcCCCc---EEEEEcCCcEEEEecCCCCcch
Q psy7057         174 TSGGEDQCVCVYQNKAQNSF--MIPAMSVWAVAILPNSD---IVTGSSDGIVRVFSANPDRQAE  232 (557)
Q Consensus       174 ~s~s~Dg~I~iwd~~~~~~~--~~~~~~v~~v~~~p~g~---l~sg~~Dg~I~iwd~~~~~~~~  232 (557)
                      ++...++.+.+||..+.+.+  ..+...+.+++|+|||+   +++++.|++|++||+.+++...
T Consensus       292 ~~~~~~~~v~~~d~~t~~~~~~~~~~~~~~~~a~spDG~~~l~vt~~~d~~v~v~D~~tg~~~~  355 (373)
T d2madh_         292 KLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQ  355 (373)
T ss_pred             EeecCCCeEEEEECCCCcEEEEecCCCCeeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEE
Confidence            66777888999998776333  23556789999999997   3578899999999999887653

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=99.48  E-value=1.5e-13  Score=135.25  Aligned_cols=226  Identities=10%  Similarity=0.025  Sum_probs=154.0

Q ss_pred             cEEEEEecc-CcccEEEEEEcCCCc-E-EEEECCCcEEEEcCCC----------------------CCCCCCCCEEEEEE
Q psy7057           2 YKLSTALYG-HSMDVRSLSVTPDGC-I-LSASRDKSAKLWKPND----------------------LSPGAKVNTLLSAS   56 (557)
Q Consensus         2 ~kl~~~l~g-H~~~V~~l~~spdg~-l-~sgs~Dg~V~iWd~~~----------------------~~~~~~~~~l~sgs   56 (557)
                      .++.++++. |...+.+++|+|||+ + ++++.++.|++||+.+                      +.+++++.++++++
T Consensus        28 ~~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~~~~~~~~~~~~~~~~~~~v~~s~DG~~l~v~~  107 (346)
T d1jmxb_          28 DTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATV  107 (346)
T ss_dssp             TEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEE
T ss_pred             CCEEEEEEcCCCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCeeeeeecccccccccCCceEEEEEecCCCEEEEEe
Confidence            467777764 566789999999998 4 5667899999999876                      45677888887765


Q ss_pred             ------------CCCeEEEEECCCCeEEEEEcc--cCCcEEEEEEcCCCEEEEEECCCeEEEEe-CCCcEEEEEeCCCCC
Q psy7057          57 ------------WDMTAKLWCLESQQCKLTIRQ--HEMAVWGVIQLANGIIVTGCADKTIKLHS-EEGEFLKTLTGHTDC  121 (557)
Q Consensus        57 ------------~Dg~i~iwd~~~~~~~~~l~~--h~~~V~~l~~~~~~~l~sgs~dg~I~vwd-~~~~~~~~l~~h~~~  121 (557)
                                  .+..+.+|+..+++....+..  ....+..+.+++++.++..+  ..+.+|+ .+++.+..+..+.. 
T Consensus       108 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-  184 (346)
T d1jmxb_         108 NPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAG--PDIYKMDVKTGKYTVALPLRNW-  184 (346)
T ss_dssp             EEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSCEEEES--SSEEEECTTTCCEEEEECSTTC-
T ss_pred             cCCcceeeeeccCcceEEEEecccceeeeEEEeeeccCceEEEEecCCCEEEEeC--CcceEEEccCCCEEEEEecCCC-
Confidence                        467788898877654332222  23445556677777555443  5588888 46666666654321 


Q ss_pred             EEEEEEeCCC--------------------------e-EEEEECCCeEEEEECCCCeEEEE-EeCCCCcEEEEEE--cCC
Q psy7057         122 VRGLAVLNDT--------------------------D-FVSCSNDASIRVWDSTTGKCVHT-MYGHPNFIYSVAA--HGD  171 (557)
Q Consensus       122 V~~l~~~~~~--------------------------~-lvs~s~Dg~I~vwd~~~~~~~~~-~~~h~~~V~~l~~--~~~  171 (557)
                      +..+.++|++                          . +.++..+..+.+||+.++..... +..|...+.++.+  ++.
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (346)
T d1jmxb_         185 NRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDP  264 (346)
T ss_dssp             CCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCT
T ss_pred             ccceEEeccccEEEEEecCCCceEeeeeeeeeccCceeEeeccCCceEEEEECCCCceEEEEeecccceeEEEEEeCCCC
Confidence            1222222221                          1 23445567788999988775544 4567778888877  444


Q ss_pred             EEEEEeCCCeEEEEECCCCceE--eeCCccEEEEEEcCCCc-EEEEEcCCcEEEEecCCCCcc
Q psy7057         172 LITSGGEDQCVCVYQNKAQNSF--MIPAMSVWAVAILPNSD-IVTGSSDGIVRVFSANPDRQA  231 (557)
Q Consensus       172 ~l~s~s~Dg~I~iwd~~~~~~~--~~~~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~~~~~  231 (557)
                      .++... ++.|++||..+.+.+  ..+...+++++|+|+|+ +++++.|+.|++||..+.+..
T Consensus       265 ~~~~~~-~~~v~v~d~~~~~~~~~~~~~~~~~~va~s~DG~~l~v~~~d~~v~v~D~~t~~~i  326 (346)
T d1jmxb_         265 NQIYGV-LNRLAKYDLKQRKLIKAANLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKV  326 (346)
T ss_dssp             TEEEEE-ESEEEEEETTTTEEEEEEECSSCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEE
T ss_pred             EEEEec-CCeEEEEECCCCcEEEEEcCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECccCCEE
Confidence            555544 457999998776332  23445799999999998 889999999999999877654

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=99.42  E-value=7.3e-12  Score=122.59  Aligned_cols=218  Identities=10%  Similarity=0.119  Sum_probs=148.1

Q ss_pred             cCcccEEEEEEcCCCc-EEE-EECCCcEEEEcCCC-------------------CCCCCCCCEEEEEEC-CCeEEEEECC
Q psy7057          10 GHSMDVRSLSVTPDGC-ILS-ASRDKSAKLWKPND-------------------LSPGAKVNTLLSASW-DMTAKLWCLE   67 (557)
Q Consensus        10 gH~~~V~~l~~spdg~-l~s-gs~Dg~V~iWd~~~-------------------~~~~~~~~~l~sgs~-Dg~i~iwd~~   67 (557)
                      .|.+.|.+|+|+|||+ |++ +..|+.|++|++..                   +++++++++|++++. ++++.+|+..
T Consensus        34 ~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~~~~~p~~l~~spDg~~l~v~~~~~~~v~~~~~~  113 (333)
T d1ri6a_          34 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLE  113 (333)
T ss_dssp             ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred             cCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeecccCCCceEEEEcCCCCEEeecccCCCceeeeccc
Confidence            5889999999999998 654 45589999998764                   567889999999885 6789999887


Q ss_pred             CCeEEE--EEcccCCcEEEEEEcCCC-EEEEEE-CCCeEEEEeCCC--cEEE-----EEeCCCCCEEEEEEeCCCeEE--
Q psy7057          68 SQQCKL--TIRQHEMAVWGVIQLANG-IIVTGC-ADKTIKLHSEEG--EFLK-----TLTGHTDCVRGLAVLNDTDFV--  134 (557)
Q Consensus        68 ~~~~~~--~l~~h~~~V~~l~~~~~~-~l~sgs-~dg~I~vwd~~~--~~~~-----~l~~h~~~V~~l~~~~~~~lv--  134 (557)
                      ......  ....+...+.++.++|++ .+++++ .+..|.+|+...  ....     ....+....+.+++++++.++  
T Consensus       114 ~~~~~~~~~~~~~~~~~~~v~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~~p~~i~~~~~~~~~~~  193 (333)
T d1ri6a_         114 DGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYC  193 (333)
T ss_dssp             TTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEE
T ss_pred             cccceecccccCCCccceEEEeeecceeeeccccccceeeEEEeccCCcceeeeceeeeeecCCCccEEEEeccceeEEe
Confidence            765443  344567778889999998 555555 556799998322  2211     122345667899999987633  


Q ss_pred             EEECCCeEEEEECCCC----eEEEEEeC------CCCcEEEEEE--cCCEE-EEEeCCCeEEEEECCCC---ceE---ee
Q psy7057         135 SCSNDASIRVWDSTTG----KCVHTMYG------HPNFIYSVAA--HGDLI-TSGGEDQCVCVYQNKAQ---NSF---MI  195 (557)
Q Consensus       135 s~s~Dg~I~vwd~~~~----~~~~~~~~------h~~~V~~l~~--~~~~l-~s~s~Dg~I~iwd~~~~---~~~---~~  195 (557)
                      +....+...+|+....    ........      .......+++  +++++ +++..++.+.+|+....   ..+   ..
T Consensus       194 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (333)
T d1ri6a_         194 VNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQP  273 (333)
T ss_dssp             EETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEE
T ss_pred             eccccCceEEEeecccccceeeeeeeeeeecCCCccccceeEEEecccCceeeecccCCeEEEEEEcCCCCEEEEEEEeC
Confidence            5556678888876432    22233321      1234455555  66654 45567789999985433   222   22


Q ss_pred             CCccEEEEEEcCCCc-EEEEE-cCCcEEEEecCC
Q psy7057         196 PAMSVWAVAILPNSD-IVTGS-SDGIVRVFSANP  227 (557)
Q Consensus       196 ~~~~v~~v~~~p~g~-l~sg~-~Dg~I~iwd~~~  227 (557)
                      ....+++++|+|+|+ |++++ .++.|++|+++.
T Consensus       274 ~~~~p~~~a~spDGk~l~va~~~~~~v~v~~id~  307 (333)
T d1ri6a_         274 TETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVG  307 (333)
T ss_dssp             CSSSCCCEEECTTSSEEEEECTTTCEEEEEEEET
T ss_pred             CCCCeeEEEEeCCCCEEEEEECCCCeEEEEEEEC
Confidence            334678899999999 55554 468999997754

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.32  E-value=1.4e-11  Score=121.88  Aligned_cols=256  Identities=10%  Similarity=0.007  Sum_probs=161.6

Q ss_pred             EEEEEEcCCCc-EEEE-----ECCCcEEEEcCCC--------------CCCCCCCCEEEEE----------ECCCeEEEE
Q psy7057          15 VRSLSVTPDGC-ILSA-----SRDKSAKLWKPND--------------LSPGAKVNTLLSA----------SWDMTAKLW   64 (557)
Q Consensus        15 V~~l~~spdg~-l~sg-----s~Dg~V~iWd~~~--------------~~~~~~~~~l~sg----------s~Dg~i~iw   64 (557)
                      +.-.+.+||++ ++..     +.+.+|.+||..+              ++++|++++|+++          +.|+.|++|
T Consensus         4 ~~~~a~spdg~~~~v~~~~~~~~~~~v~v~D~~tg~~~~~~~~g~~~~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~v~   83 (355)
T d2bbkh_           4 RILEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPNPVVADDGSFIAHASTVFSRIARGERTDYVEVF   83 (355)
T ss_dssp             CBCCCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEE
T ss_pred             cEeEeeCCCCCEEEEEecccCCCcCeEEEEECCCCcEEEEEECCCCCceEEcCCCCEEEEEeCCCccccccCCCCEEEEE
Confidence            33345689998 5443     3466799999887              5788899988764          357899999


Q ss_pred             ECCCCeEEEEEcccCC-------cEEEEEEcCCC-EEEEE--ECCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCeE
Q psy7057          65 CLESQQCKLTIRQHEM-------AVWGVIQLANG-IIVTG--CADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTDF  133 (557)
Q Consensus        65 d~~~~~~~~~l~~h~~-------~V~~l~~~~~~-~l~sg--s~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~l  133 (557)
                      |+.+++.+..+..+..       ....++|++++ .++.+  +.+..+.+|+ .+++.+..+..+....  +.......+
T Consensus        84 D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  161 (355)
T d2bbkh_          84 DPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYH--IFPTAPDTF  161 (355)
T ss_dssp             CTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEE--EEEEETTEE
T ss_pred             ECCCCCEEEEEecCCcceeecCCCCceEEEecCCCeeEEecCCCCceeeeeecCCCcEeeEEecCCcce--EeecCCcce
Confidence            9999998887754432       23457899988 55544  4567899999 4566666665443221  111222335


Q ss_pred             EEEECCCeEEEEECCCCeEEEEEe------CCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCCce-----EeeCC---
Q psy7057         134 VSCSNDASIRVWDSTTGKCVHTMY------GHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQNS-----FMIPA---  197 (557)
Q Consensus       134 vs~s~Dg~I~vwd~~~~~~~~~~~------~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~~~-----~~~~~---  197 (557)
                      ++.+.|+...++.......+..+.      .+...+.+..+  .+..++.++.++.+++|+......     ...+.   
T Consensus       162 ~~~~~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~  241 (355)
T d2bbkh_         162 FMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAE  241 (355)
T ss_dssp             EEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHH
T ss_pred             EEEcCCCCEEEEEecCCCeEEEEecccccceecceeeeccccCCCCeEEEecCCCeEEEEecCCCcEEEEeccCCcccce
Confidence            555666666555544332222221      22333334444  566888999999999999765411     11111   


Q ss_pred             -------ccEEEEEEcCCCc-EEEEEcC----------CcEEEEecCCCCcchhHHHhcccceeEEEeccCCCc-eeEEE
Q psy7057         198 -------MSVWAVAILPNSD-IVTGSSD----------GIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQE-IGGVK  258 (557)
Q Consensus       198 -------~~v~~v~~~p~g~-l~sg~~D----------g~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~~~vs  258 (557)
                             .....+++++++. ++....+          ..|++||..+.+......   ....+..+.+.++.. ..+++
T Consensus       242 ~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t~~~~~~~~---~~~~~~~~a~spDG~~~l~v~  318 (355)
T d2bbkh_         242 RADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFE---MGHEIDSINVSQDEKPLLYAL  318 (355)
T ss_dssp             HHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEE---EEEEECEEEECCSSSCEEEEE
T ss_pred             EeeeeeccceEEEEEeCCCCeEEEEeccCCceeecCCCCeEEEEeCCCCcEEEEec---CCCCEEEEEEcCCCCeEEEEE
Confidence                   1234578899988 4433332          369999998876543222   233456777777665 34577


Q ss_pred             EeCCCcEEEEecCCChh
Q psy7057         259 VSDDGIVRVFSANPDRQ  275 (557)
Q Consensus       259 ~s~DG~IrvW~~~~~~~  275 (557)
                      ++.|+.|+|||..+++.
T Consensus       319 ~~~d~~i~v~D~~tg~~  335 (355)
T d2bbkh_         319 STGDKTLYIHDAESGEE  335 (355)
T ss_dssp             ETTTTEEEEEETTTCCE
T ss_pred             ECCCCEEEEEECCCCCE
Confidence            88899999999887643

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.32  E-value=1.3e-10  Score=114.82  Aligned_cols=225  Identities=13%  Similarity=0.077  Sum_probs=142.7

Q ss_pred             EEEEEeccCcccEEEEEEcCCCc-EEEE----------ECCCcEEEEcCCC-----------------------CCCCCC
Q psy7057           3 KLSTALYGHSMDVRSLSVTPDGC-ILSA----------SRDKSAKLWKPND-----------------------LSPGAK   48 (557)
Q Consensus         3 kl~~~l~gH~~~V~~l~~spdg~-l~sg----------s~Dg~V~iWd~~~-----------------------~~~~~~   48 (557)
                      ++..++..+...  .++|||||+ |+++          +.|+.|++||..+                       +.++++
T Consensus        39 ~~~~~~~~g~~~--~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~d  116 (355)
T d2bbkh_          39 RVIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPD  116 (355)
T ss_dssp             EEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTT
T ss_pred             cEEEEEECCCCC--ceEEcCCCCEEEEEeCCCccccccCCCCEEEEEECCCCCEEEEEecCCcceeecCCCCceEEEecC
Confidence            456666665444  799999998 6543          4588999999876                       356778


Q ss_pred             CCEEEEEE--CCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCCEEEEEECCCeEEEEeC-CCcEEEEE------eCCC
Q psy7057          49 VNTLLSAS--WDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSE-EGEFLKTL------TGHT  119 (557)
Q Consensus        49 ~~~l~sgs--~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~-~~~~~~~l------~~h~  119 (557)
                      +..++.++  .+..+.+|+..+++.+..+..+....  +........++.+.|+...++.. .......+      ..+.
T Consensus       117 g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~dg~~~~v~~~~~~~~~~~~~~~~~~~~~  194 (355)
T d2bbkh_         117 GKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYH--IFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDE  194 (355)
T ss_dssp             SSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEE--EEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTS
T ss_pred             CCeeEEecCCCCceeeeeecCCCcEeeEEecCCcce--EeecCCcceEEEcCCCCEEEEEecCCCeEEEEecccccceec
Confidence            88887775  45789999999999888876544322  11112224455566666555541 11111111      1233


Q ss_pred             CCEEEEEEeCC-CeEEEEECCCeEEEEECCCCeEE--EEEeCCC------------CcEEEEEEcCCEEEEEeCC-----
Q psy7057         120 DCVRGLAVLND-TDFVSCSNDASIRVWDSTTGKCV--HTMYGHP------------NFIYSVAAHGDLITSGGED-----  179 (557)
Q Consensus       120 ~~V~~l~~~~~-~~lvs~s~Dg~I~vwd~~~~~~~--~~~~~h~------------~~V~~l~~~~~~l~s~s~D-----  179 (557)
                      ..+....+.++ +.++.++.++.+.+|++..++..  .....+.            .....+..++..++..+.+     
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~~  274 (355)
T d2bbkh_         195 FLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWR  274 (355)
T ss_dssp             CBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTC
T ss_pred             ceeeeccccCCCCeEEEecCCCeEEEEecCCCcEEEEeccCCcccceEeeeeeccceEEEEEeCCCCeEEEEeccCCcee
Confidence            34455556655 55888999999999998876532  2222221            1122333366665554433     


Q ss_pred             -----CeEEEEECCCCceEe--eCCccEEEEEEcCCCc---EEEEEcCCcEEEEecCCCCcc
Q psy7057         180 -----QCVCVYQNKAQNSFM--IPAMSVWAVAILPNSD---IVTGSSDGIVRVFSANPDRQA  231 (557)
Q Consensus       180 -----g~I~iwd~~~~~~~~--~~~~~v~~v~~~p~g~---l~sg~~Dg~I~iwd~~~~~~~  231 (557)
                           ..|.+||..+.+.+.  .+...+.+++|+|+|+   +++++.|++|++||..+++..
T Consensus       275 ~~~~~~~v~v~d~~t~~~~~~~~~~~~~~~~a~spDG~~~l~v~~~~d~~i~v~D~~tg~~~  336 (355)
T d2bbkh_         275 HKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEEL  336 (355)
T ss_dssp             TTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEE
T ss_pred             ecCCCCeEEEEeCCCCcEEEEecCCCCEEEEEEcCCCCeEEEEEECCCCEEEEEECCCCCEE
Confidence                 369999987663322  2334688999999997   345667999999999988754

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.04  E-value=1.8e-09  Score=107.83  Aligned_cols=225  Identities=10%  Similarity=-0.009  Sum_probs=142.6

Q ss_pred             EEEEEeccCcccEEEEEEcCCCc-EEEEE----------CCCcEEEEcCCC-----------------------CCCCCC
Q psy7057           3 KLSTALYGHSMDVRSLSVTPDGC-ILSAS----------RDKSAKLWKPND-----------------------LSPGAK   48 (557)
Q Consensus         3 kl~~~l~gH~~~V~~l~~spdg~-l~sgs----------~Dg~V~iWd~~~-----------------------~~~~~~   48 (557)
                      ++..++.+|...  .++|+|||+ |++.+          .|++|++||..+                       +.++++
T Consensus        57 ~~~~~~~~~~~~--~~a~spDg~~i~~~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~SpD  134 (368)
T d1mdah_          57 VTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCAS  134 (368)
T ss_dssp             EEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTT
T ss_pred             cEEEEEeCCCCC--cceECCCCCEEEEEcccCccccccccCCeEEEEECCCCcEeeeecCCccceecccCCccceEECCC
Confidence            455666666554  589999998 66543          478899999875                       347788


Q ss_pred             CCEEEEEE-CCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCCEEEEEECCCeEEEEeCC--CcEEE-----EEeCCCC
Q psy7057          49 VNTLLSAS-WDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCADKTIKLHSEE--GEFLK-----TLTGHTD  120 (557)
Q Consensus        49 ~~~l~sgs-~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~~l~sgs~dg~I~vwd~~--~~~~~-----~l~~h~~  120 (557)
                      +++|++++ .++.+.+||+.+++....+..+....  +.......++..+.||.+.+++..  +....     .+..+..
T Consensus       135 Gk~l~va~~~~~~v~~~d~~~~~~~~~~~~~~~~~--~~~~~~~~~v~~~~Dg~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (368)
T d1mdah_         135 SACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFH--IHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNC  212 (368)
T ss_dssp             SSCEEEEECSSSCEEEEEETTTEEEEEEECSSCCC--CEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCB
T ss_pred             CCEEEEEeCCCCeEEEEECCCCcEeEEeeccCcce--EccCCCceEEEEcCCCCEEEEEecCCceeeeeeeccccccccc
Confidence            99888876 56999999999999988887654432  111223377778888888888732  11111     1223444


Q ss_pred             CEEEEEEeCCCeEEEEECCCeEEEEECCCCeEEEEE--eCC------------CCcEEEEEEcCCEEEEEeCC-------
Q psy7057         121 CVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTM--YGH------------PNFIYSVAAHGDLITSGGED-------  179 (557)
Q Consensus       121 ~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~~~~~~--~~h------------~~~V~~l~~~~~~l~s~s~D-------  179 (557)
                      .+....+.+++..+. +..+.+.++++..+......  ..+            ......+..++..++....+       
T Consensus       213 ~~~~~~~~~~g~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~~~~v~~~~~~~~~~~  291 (368)
T d1mdah_         213 SSQAAQANYPGMLVW-AVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLA  291 (368)
T ss_dssp             CSCCEEETTTTEEEE-CBSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTS
T ss_pred             ceeecccccCcEEEE-ecCCCEEEEeecCCceEEEeecccccceeeeeeecCCCceeEEEcCCCCEEEEEecCCCceeec
Confidence            455667777776443 23456667776554433221  111            11223444466654443221       


Q ss_pred             --CeEEEEECCCCceEe--eCCccEEEEEEcCCCc---EEEEEcCCcEEEEecCCCCcch
Q psy7057         180 --QCVCVYQNKAQNSFM--IPAMSVWAVAILPNSD---IVTGSSDGIVRVFSANPDRQAE  232 (557)
Q Consensus       180 --g~I~iwd~~~~~~~~--~~~~~v~~v~~~p~g~---l~sg~~Dg~I~iwd~~~~~~~~  232 (557)
                        ..|.+||..+.+.+.  .+...+.+++|+|+|+   ++++..|+.|++||..+++...
T Consensus       292 ~~~~v~v~D~~t~~~~~~~~~~~~~~~~a~spDG~~~ly~s~~~~~~v~v~D~~tgk~~~  351 (368)
T d1mdah_         292 AAENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQS  351 (368)
T ss_dssp             CEEEEEEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEE
T ss_pred             CCceEEEEECCCCcEeEEecCCCceeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEE
Confidence              358899987764332  2234688999999996   3566679999999998877543

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.97  E-value=4.2e-09  Score=105.09  Aligned_cols=260  Identities=9%  Similarity=-0.069  Sum_probs=157.4

Q ss_pred             CcccEEEEEEcCCCc--EEE--EECCCc--EEEEcCCC--------------CCCCCCCCEEEEEE----------CCCe
Q psy7057          11 HSMDVRSLSVTPDGC--ILS--ASRDKS--AKLWKPND--------------LSPGAKVNTLLSAS----------WDMT   60 (557)
Q Consensus        11 H~~~V~~l~~spdg~--l~s--gs~Dg~--V~iWd~~~--------------~~~~~~~~~l~sgs----------~Dg~   60 (557)
                      +.++...++..++++  .++  ...+++  |.+||..+              +.+++++..|++.+          .|++
T Consensus        18 ~~g~~~~~a~~~~~~~~~v~~~~~~~g~~~~~~~d~~~~~~~~~~~~~~~~~~a~spDg~~i~~~~~~~~~~~~g~~d~~   97 (368)
T d1mdah_          18 SDGSSCDHGPGAISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLSLAVAGHSGSDFALASTSFARSAKGKRTDY   97 (368)
T ss_dssp             CCCCCBCCCCCCCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTCEEEECTTSSCEEEEEEEETTTTSSSEEEE
T ss_pred             cCCCccccccCCCCcceeEEeeccCCCcceEEEEeCCCCcEEEEEeCCCCCcceECCCCCEEEEEcccCccccccccCCe
Confidence            455556667778886  333  345555  44557665              56778898888765          3778


Q ss_pred             EEEEECCCCeEEEEEcccCC-------cEEEEEEcCCC-EEEEEE-CCCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCC
Q psy7057          61 AKLWCLESQQCKLTIRQHEM-------AVWGVIQLANG-IIVTGC-ADKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLND  130 (557)
Q Consensus        61 i~iwd~~~~~~~~~l~~h~~-------~V~~l~~~~~~-~l~sgs-~dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~  130 (557)
                      |++||..+++++..+..+..       ....++|+|+| .++++. .++.+.+|| .+++.+..+..+....  +...+.
T Consensus        98 v~v~D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~~~~v~~~d~~~~~~~~~~~~~~~~~--~~~~~~  175 (368)
T d1mdah_          98 VEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFH--IHPGAA  175 (368)
T ss_dssp             EEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEECSSCCC--CEEEET
T ss_pred             EEEEECCCCcEeeeecCCccceecccCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcEeEEeeccCcce--EccCCC
Confidence            99999999998888764432       22358999999 555554 679999999 5666667666554332  112233


Q ss_pred             CeEEEEECCCeEEEEECCCCeEEEEE------eCCCCcEEEEEEcCCEEEEEeCCCeEEEEECCCC--ceEee-------
Q psy7057         131 TDFVSCSNDASIRVWDSTTGKCVHTM------YGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQ--NSFMI-------  195 (557)
Q Consensus       131 ~~lvs~s~Dg~I~vwd~~~~~~~~~~------~~h~~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~~--~~~~~-------  195 (557)
                      ..+++.+.||++.+|++.........      ..+...+..+.+.....+.....+.+++++....  ..+..       
T Consensus       176 ~~~v~~~~Dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~  255 (368)
T d1mdah_         176 ATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESG  255 (368)
T ss_dssp             TEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECBSSCCEEEECCSSCCEEECCCCSSCTH
T ss_pred             ceEEEEcCCCCEEEEEecCCceeeeeeecccccccccceeecccccCcEEEEecCCCEEEEeecCCceEEEeecccccce
Confidence            45778888999999987654432222      1233333444442222222223344445543322  11100       


Q ss_pred             ------CCccEEEEEEcCCCc-EEEE-EcC--------CcEEEEecCCCCcchhHHHhcccceeEEEeccCCCc-eeEEE
Q psy7057         196 ------PAMSVWAVAILPNSD-IVTG-SSD--------GIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQE-IGGVK  258 (557)
Q Consensus       196 ------~~~~v~~v~~~p~g~-l~sg-~~D--------g~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~~~vs  258 (557)
                            .......++++|++. ++.. ..+        ..|.+||..+.+......   ....+..+.+.++.. ..+++
T Consensus       256 ~~~~~~~~~g~~~~a~~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~---~~~~~~~~a~spDG~~~ly~s  332 (368)
T d1mdah_         256 RKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPIS---NGHDSDAIIAAQDGASDNYAN  332 (368)
T ss_dssp             HHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCE---EEEEECEEEECCSSSCEEEEE
T ss_pred             eeeeeecCCCceeEEEcCCCCEEEEEecCCCceeecCCceEEEEECCCCcEeEEec---CCCceeEEEECCCCCEEEEEE
Confidence                  001123577888887 3332 222        358899998887553332   234566677777765 45678


Q ss_pred             EeCCCcEEEEecCCChh
Q psy7057         259 VSDDGIVRVFSANPDRQ  275 (557)
Q Consensus       259 ~s~DG~IrvW~~~~~~~  275 (557)
                      ++.|+.|+|||..+++.
T Consensus       333 ~~~~~~v~v~D~~tgk~  349 (368)
T d1mdah_         333 SAGTEVLDIYDAASDQD  349 (368)
T ss_dssp             ETTTTEEEEEESSSCEE
T ss_pred             eCCCCeEEEEECCCCCE
Confidence            88999999999887654

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=98.87  E-value=1.1e-06  Score=83.96  Aligned_cols=213  Identities=14%  Similarity=0.262  Sum_probs=147.3

Q ss_pred             cEEEEEEcCCCcEE-EEECCCcEEEEcCCC---------------------CCCCCC-CCEEEEE-ECCCeEEEEECCCC
Q psy7057          14 DVRSLSVTPDGCIL-SASRDKSAKLWKPND---------------------LSPGAK-VNTLLSA-SWDMTAKLWCLESQ   69 (557)
Q Consensus        14 ~V~~l~~spdg~l~-sgs~Dg~V~iWd~~~---------------------~~~~~~-~~~l~sg-s~Dg~i~iwd~~~~   69 (557)
                      .-+.|+++++|+|+ +-..++.|++||.+.                     +..... +..+++. +.++.|..++. .+
T Consensus        24 ~P~gvavd~dg~i~VaD~~n~rI~v~d~~G~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~g  102 (279)
T d1q7fa_          24 EPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQ-YG  102 (279)
T ss_dssp             CEEEEEECTTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECT-TS
T ss_pred             CccEEEEcCCCCEEEEECCCCEEEEEeCCCCEEEEecccCCCcccccccccccccccccccceeccCCccccccccc-cc
Confidence            46899999999955 445678899998764                     011111 2233322 23456666664 45


Q ss_pred             eEEEEEc-ccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcEEEEEe--CCCCCEEEEEEeCCCeEE-EEECCCeEEE
Q psy7057          70 QCKLTIR-QHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFLKTLT--GHTDCVRGLAVLNDTDFV-SCSNDASIRV  144 (557)
Q Consensus        70 ~~~~~l~-~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~~~l~--~h~~~V~~l~~~~~~~lv-s~s~Dg~I~v  144 (557)
                      .....+. ........+++.+++ .+++....+.+.+++.+++.+..+.  .+......+++.+++.++ +....+.|++
T Consensus       103 ~~~~~~~~~~~~~p~~~avd~~G~i~v~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~i~~d~~g~i~v~d~~~~~V~~  182 (279)
T d1q7fa_         103 QFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKV  182 (279)
T ss_dssp             CEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEE
T ss_pred             cceeecCCCcccccceeccccCCcEEEEeeccceeeEeccCCceeecccccccccccceeeeccceeEEeeeccccceee
Confidence            5555553 345667889999888 5666666777899998888877763  456678899999888754 6667789999


Q ss_pred             EECCCCeEEEEEe--CCCCcEEEEEE--cCCEEEEEe-CCCeEEEEECCCC--ceEeeC--CccEEEEEEcCCCcEEEEE
Q psy7057         145 WDSTTGKCVHTMY--GHPNFIYSVAA--HGDLITSGG-EDQCVCVYQNKAQ--NSFMIP--AMSVWAVAILPNSDIVTGS  215 (557)
Q Consensus       145 wd~~~~~~~~~~~--~h~~~V~~l~~--~~~~l~s~s-~Dg~I~iwd~~~~--~~~~~~--~~~v~~v~~~p~g~l~sg~  215 (557)
                      ||. +++.+.++.  ++......|++  +++.+++-+ .++.|.+|+....  ..+...  ....+.|++.|+|.|++++
T Consensus       183 ~d~-~G~~~~~~g~~g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~~~G~~~~~~~~~~~~~~p~~vav~~dG~l~V~~  261 (279)
T d1q7fa_         183 FNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLISALESKVKHAQCFDVALMDDGSVVLAS  261 (279)
T ss_dssp             EET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSCEEEEEEESSCCSCEEEEEEETTTEEEEEE
T ss_pred             eec-CCceeeeecccccccCCcccccccCCeEEEEECCCCcEEEEECCCCCEEEEEeCCCCCCCEeEEEEeCCCcEEEEe
Confidence            994 677777774  34456788888  566666644 4557999985432  333322  2357899999999977778


Q ss_pred             cCCcEEEEecCCC
Q psy7057         216 SDGIVRVFSANPD  228 (557)
Q Consensus       216 ~Dg~I~iwd~~~~  228 (557)
                      .+++|++|.....
T Consensus       262 ~n~~v~~fr~~~~  274 (279)
T d1q7fa_         262 KDYRLYIYRYVQL  274 (279)
T ss_dssp             TTTEEEEEECSCC
T ss_pred             CCCeEEEEEeeee
Confidence            8999999998754

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=98.55  E-value=1.3e-06  Score=88.26  Aligned_cols=191  Identities=13%  Similarity=0.107  Sum_probs=114.1

Q ss_pred             cCCcEEEEEEcCCC--EEEEEECCCeEEEEeC-CCcEEEEEe-CCCCCEEEEEEeCCCe--EEEEECCCe----------
Q psy7057          78 HEMAVWGVIQLANG--IIVTGCADKTIKLHSE-EGEFLKTLT-GHTDCVRGLAVLNDTD--FVSCSNDAS----------  141 (557)
Q Consensus        78 h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~-~~~~~~~l~-~h~~~V~~l~~~~~~~--lvs~s~Dg~----------  141 (557)
                      |..........|||  ++++...++.|.++|. ++++...+. .+...+..++++|+++  ++++..+..          
T Consensus        70 hhP~~s~t~gtpDGr~lfV~d~~~~rVavIDl~t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~  149 (441)
T d1qnia2          70 HHPHISMTDGRYDGKYLFINDKANTRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDF  149 (441)
T ss_dssp             CCCEEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCC
T ss_pred             cCCCcceecccCCCCEEEEEcCCCCEEEEEECCCCcEeeEEecCCCCCccceEEeccCCEEEEEeccCCcccccCccccc
Confidence            33445555556788  4466668889999994 556666554 4678899999999877  554443333          


Q ss_pred             --------EEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCC--------------------------------
Q psy7057         142 --------IRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGED--------------------------------  179 (557)
Q Consensus       142 --------I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~D--------------------------------  179 (557)
                              +..+|..+.+...++... .....+.+  +|+++++.+.+                                
T Consensus       150 ~~~~~~~~~~~iD~~t~~v~~qI~v~-~~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n~p~~~~~~~d  228 (441)
T d1qnia2         150 SLDNSYTMFTAIDAETMDVAWQVIVD-GNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVKA  228 (441)
T ss_dssp             CGGGEEEEEEEEETTTCSEEEEEEES-SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEHHHHHHHHHT
T ss_pred             ccccccceEEeecCccceeeEEEecC-CCccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeCCccceEEEecC
Confidence                    355888887777666532 23445555  67766665533                                


Q ss_pred             ---------CeEEEEECCCC---ceEeeCCccEEEEEEcCCCc--EEEEEcCCcEEEEecCCCCcchhHHHhcccceeEE
Q psy7057         180 ---------QCVCVYQNKAQ---NSFMIPAMSVWAVAILPNSD--IVTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKK  245 (557)
Q Consensus       180 ---------g~I~iwd~~~~---~~~~~~~~~v~~v~~~p~g~--l~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~  245 (557)
                               +.+.+++....   ..+.... ....+.++|+|+  ++++..+++|.|||+........... .+...+..
T Consensus       229 Gk~~~v~~~~v~vvd~~~~~~v~~~IPvgk-sPhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~~~~~~~~-~~~~~~~~  306 (441)
T d1qnia2         229 GNFKTIGDSKVPVVDGRGESEFTRYIPVPK-NPHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDKI-ELRDTIVA  306 (441)
T ss_dssp             TCCBCCTTCCCCEEECSSSCSSEEEECCBS-SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHTTTSS-CGGGGEEE
T ss_pred             CCEEEeCCCCcEEEEcccCCceEEEEeCCC-CccCceECCCCCEEEEeCCcCCcEEEEEeehhhhHhhccC-CcceEEEe
Confidence                     23344432222   2333333 357799999999  45677899999999865321100000 01111110


Q ss_pred             --------E-eccCCCceeEEEEeCCCcEEEEecC
Q psy7057         246 --------L-KSANEQEIGGVKVSDDGIVRVFSAN  271 (557)
Q Consensus       246 --------l-~~~~~~~~~~vs~s~DG~IrvW~~~  271 (557)
                              + ...........+...|..|..|++.
T Consensus       307 ~~~~glgplh~~fd~~g~~yts~~~ds~v~kw~~~  341 (441)
T d1qnia2         307 EPELGLGPLHTTFDGRGNAYTTLFIDSQVCKWNIA  341 (441)
T ss_dssp             CCBCCSCEEEEEECSSSEEEEEETTTTEEEEEEHH
T ss_pred             ecccccCcccceecCCceEEEcccccceEEEeccc
Confidence                    0 1123334556788899999999974

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=98.55  E-value=2.3e-05  Score=75.88  Aligned_cols=213  Identities=11%  Similarity=0.082  Sum_probs=137.9

Q ss_pred             cEEEEEEcCCCcEEEEEC--------CCcEEEEcCCC--------------------CCCCCCCCEEEEEECCCeEEEEE
Q psy7057          14 DVRSLSVTPDGCILSASR--------DKSAKLWKPND--------------------LSPGAKVNTLLSASWDMTAKLWC   65 (557)
Q Consensus        14 ~V~~l~~spdg~l~sgs~--------Dg~V~iWd~~~--------------------~~~~~~~~~l~sgs~Dg~i~iwd   65 (557)
                      ..-.++|.++|+|+.++.        +++|..||..+                    +.++++++.++++.....+..++
T Consensus        19 g~EGpa~d~dG~ly~~~~~~~~~~~~~g~I~r~d~~~~~~~~~~~~~~~~~~g~P~Gl~~~~dg~~l~vad~~~~i~~~~   98 (314)
T d1pjxa_          19 GAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVVQ   98 (314)
T ss_dssp             TCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEEEE
T ss_pred             CCeEeEEeCCCCEEEEECccccccccCCEEEEEECCCCcEEEEECCccccCCCcceeEEEeCCCCEEEEEECCCeEEEEe
Confidence            345678999999665443        46788888765                    45567788888888888888889


Q ss_pred             CCCCeEEEEEcccC----CcEEEEEEcCCCEEEEEEC----------------CCeEEEEeCCCcEEEEEeCCCCCEEEE
Q psy7057          66 LESQQCKLTIRQHE----MAVWGVIQLANGIIVTGCA----------------DKTIKLHSEEGEFLKTLTGHTDCVRGL  125 (557)
Q Consensus        66 ~~~~~~~~~l~~h~----~~V~~l~~~~~~~l~sgs~----------------dg~I~vwd~~~~~~~~l~~h~~~V~~l  125 (557)
                      ..............    ...+.+++.++|.|..+..                .+.|..++.+++...... .-...+.+
T Consensus        99 ~~g~~~~~~~~~~~g~~~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~dg~~~~~~~-~~~~pNGi  177 (314)
T d1pjxa_          99 TDGTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDGQMIQVDT-AFQFPNGI  177 (314)
T ss_dssp             TTSCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTSCEEEEEE-EESSEEEE
T ss_pred             CCCcEEEEEeccccccccCCCcEEEECCCCCEEEecCccCcccccccceeccCCceEEEEeecCceeEeeC-Ccceeeee
Confidence            77654322111111    1356789999984433332                234555556665544332 23345788


Q ss_pred             EEeCCC-----eE-EEEECCCeEEEEECCCCeEEE------EEeC-CCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC
Q psy7057         126 AVLNDT-----DF-VSCSNDASIRVWDSTTGKCVH------TMYG-HPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ  190 (557)
Q Consensus       126 ~~~~~~-----~l-vs~s~Dg~I~vwd~~~~~~~~------~~~~-h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~  190 (557)
                      +|++++     .| ++-+..+.|..||+.....+.      .+.+ +......|++  +|+++++....+.|.+||....
T Consensus       178 ~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~pdGiavD~~GnlyVa~~~~g~I~~~dp~~g  257 (314)
T d1pjxa_         178 AVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGG  257 (314)
T ss_dssp             EEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCB
T ss_pred             EECCCCCcceeEEEEEeecccceEEeeccCccccceeeEEEEccccccccceeeEEecCCcEEEEEcCCCEEEEEeCCCC
Confidence            888764     23 456677889888865332221      1111 2234556777  6777788888899999996543


Q ss_pred             ---ceEeeCCccEEEEEEcCCCc--EEEEEcCCcEEEEecCC
Q psy7057         191 ---NSFMIPAMSVWAVAILPNSD--IVTGSSDGIVRVFSANP  227 (557)
Q Consensus       191 ---~~~~~~~~~v~~v~~~p~g~--l~sg~~Dg~I~iwd~~~  227 (557)
                         ..+..+.....+++|.|+++  +++.+.++.|..+++..
T Consensus       258 ~~~~~i~~p~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~~~  299 (314)
T d1pjxa_         258 QPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR  299 (314)
T ss_dssp             SCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred             EEEEEEECCCCCEEEEEEeCCCCEEEEEECCCCcEEEEECCC
Confidence               44566667889999999986  56667788888887653

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.53  E-value=4.7e-06  Score=78.43  Aligned_cols=210  Identities=11%  Similarity=0.086  Sum_probs=132.4

Q ss_pred             EEEEEEcCCCcEE-EE-ECCCcEEEEcCCC----------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEc
Q psy7057          15 VRSLSVTPDGCIL-SA-SRDKSAKLWKPND----------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIR   76 (557)
Q Consensus        15 V~~l~~spdg~l~-sg-s~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~   76 (557)
                      -.+|++.++|.+. +. +..+.+..++...                +++++++..+++....+.+++++..+...+....
T Consensus        16 P~~vavd~dG~i~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~gvav~~~g~i~v~d~~~~~i~~~~~~~~~~~~~~~   95 (260)
T d1rwia_          16 PSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLPFD   95 (260)
T ss_dssp             EEEEEECTTCCEEEEECSSSCEEEEEC----CEEECCCCSCCSCCCEEECTTCCEEEEETTTEEEEECTTCSCCEECCCC
T ss_pred             CCEEEEcCCCCEEEEEcCCCCEEEEEcCCCceEEEeccCCccCceEEEEcCCCCEEEeeeeeceeeeeeeccceeeeeee
Confidence            4799999999944 33 4557777776554                4455667766666666666666555444433322


Q ss_pred             ccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcEEEEEe-CCCCCEEEEEEeCCCeE-EEEECCCeEEEEECCCCeEE
Q psy7057          77 QHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFLKTLT-GHTDCVRGLAVLNDTDF-VSCSNDASIRVWDSTTGKCV  153 (557)
Q Consensus        77 ~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~~~l~-~h~~~V~~l~~~~~~~l-vs~s~Dg~I~vwd~~~~~~~  153 (557)
                       ......++++.+++ ++++-..+..+..++..+....... .-.....++++.+++.+ ++...++.|..++.......
T Consensus        96 -~~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~~~v~~~~~~~i~~~d~~~~~~~  174 (260)
T d1rwia_          96 -GLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQV  174 (260)
T ss_dssp             -SCCSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSCEECCCCSCCSCCEEEECTTCCEEEEEGGGTEEEEECTTTCCEE
T ss_pred             -eeeecccccccccceeEeeccccccccccccccceeeeeeecccCCcceeeecCCCCEeeeccccccccccccccceee
Confidence             23567899999988 5555555666777775554433332 22345678999988774 46677788999997654433


Q ss_pred             EEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC-ceEee--CCccEEEEEEcCCCcEE-EEEcCCcEEEEec
Q psy7057         154 HTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ-NSFMI--PAMSVWAVAILPNSDIV-TGSSDGIVRVFSA  225 (557)
Q Consensus       154 ~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~-~~~~~--~~~~v~~v~~~p~g~l~-sg~~Dg~I~iwd~  225 (557)
                      ......-.....|++  +++++++....+.|..++.... ..+..  .-.....|++.++|.|. +-..+++|+.++.
T Consensus       175 ~~~~~~~~~p~gi~~d~~g~l~vsd~~~~~i~~~~~~~~~~~~~~~~~~~~P~~i~~d~~g~l~vad~~~~rI~~i~~  252 (260)
T d1rwia_         175 VLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTS  252 (260)
T ss_dssp             ECCCSSCCSEEEEEECTTCCEEEEETTTTEEEEECTTCSCCEECCCCSCCCEEEEEECTTCCEEEEEGGGTEEEEECC
T ss_pred             eeeccccCCCccceeeeeeeeeeeecCCCEEEEEeCCCCeEEEEccCCCCCeEEEEEeCCCCEEEEECCCCEEEEEeC
Confidence            322244556788888  5667777777888888885544 22222  22357899999998844 4455666666554

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=98.46  E-value=1.6e-05  Score=76.27  Aligned_cols=212  Identities=12%  Similarity=0.056  Sum_probs=138.7

Q ss_pred             EEEEEeccCcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC--------------CCCCCCCCEEEEEECCCeEEEEECC
Q psy7057           3 KLSTALYGHSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND--------------LSPGAKVNTLLSASWDMTAKLWCLE   67 (557)
Q Consensus         3 kl~~~l~gH~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~--------------~~~~~~~~~l~sgs~Dg~i~iwd~~   67 (557)
                      |++..+.... .+..++++|||+ +++...+++|..|+...              +.++++++++++...++.+.+|+..
T Consensus        19 ~v~~~~p~~~-~~e~iAv~pdG~l~vt~~~~~~I~~i~p~g~~~~~~~~~~~~~gla~~~dG~l~v~~~~~~~~~~~~~~   97 (302)
T d2p4oa1          19 KIITSFPVNT-FLENLASAPDGTIFVTNHEVGEIVSITPDGNQQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLV   97 (302)
T ss_dssp             EEEEEECTTC-CEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEE
T ss_pred             cEEEECCCCC-CcCCEEECCCCCEEEEeCCCCEEEEEeCCCCEEEEEcCCCCcceEEEcCCCCeEEEecCCceEEEEEec
Confidence            4445554322 588999999999 55777799999998766              7778889999998888888888764


Q ss_pred             CC--eEEE-EEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcEEEEEe-----------CCCCCEEEEEEeCCCe
Q psy7057          68 SQ--QCKL-TIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFLKTLT-----------GHTDCVRGLAVLNDTD  132 (557)
Q Consensus        68 ~~--~~~~-~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~~~l~-----------~h~~~V~~l~~~~~~~  132 (557)
                      ..  .... ...........+++.+++ ++++.+.++.+..++..+.......           ........+.+..+..
T Consensus        98 ~~~~~~~~~~~~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ngi~~~~~~l  177 (302)
T d2p4oa1          98 KSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFL  177 (302)
T ss_dssp             CTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEE
T ss_pred             ccccceeeccccCCccccceeEEccCCCEEeeccccccceeeeccCCcceeEecCCccceeeccCcccccccccccCCce
Confidence            43  2211 122345668899999999 6666677888888885544322211           1123466777776555


Q ss_pred             EEEEECCCeEEEEECCCCeEE---EEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC-ceEee---CCccEEEE
Q psy7057         133 FVSCSNDASIRVWDSTTGKCV---HTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ-NSFMI---PAMSVWAV  203 (557)
Q Consensus       133 lvs~s~Dg~I~vwd~~~~~~~---~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~-~~~~~---~~~~v~~v  203 (557)
                      +++.+..+.|..+++......   ..+. .......+++  +|+++++...++.|..++.... ..+..   .-....++
T Consensus       178 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~pdgia~d~dG~l~va~~~~~~V~~i~p~G~~~~~~~~~~~~~~pt~v  256 (302)
T d2p4oa1         178 YVSNTEKMLLLRIPVDSTDKPGEPEIFV-EQTNIDDFAFDVEGNLYGATHIYNSVVRIAPDRSTTIIAQAEQGVIGSTAV  256 (302)
T ss_dssp             EEEETTTTEEEEEEBCTTSCBCCCEEEE-ESCCCSSEEEBTTCCEEEECBTTCCEEEECTTCCEEEEECGGGTCTTEEEE
T ss_pred             eeecCCCCeEEecccccccccccccccc-CCCCCcceEECCCCCEEEEEcCCCcEEEECCCCCEEEEEecCCCCCCceEE
Confidence            678888899998887643211   1111 2223445677  6777777788899999986544 22222   33457899


Q ss_pred             EE---cCCCc-EEEEEc
Q psy7057         204 AI---LPNSD-IVTGSS  216 (557)
Q Consensus       204 ~~---~p~g~-l~sg~~  216 (557)
                      +|   .++++ |..++.
T Consensus       257 afg~~~~D~~~Lyvtt~  273 (302)
T d2p4oa1         257 AFGQTEGDCTAIYVVTN  273 (302)
T ss_dssp             EECCSTTTTTEEEEEEC
T ss_pred             EEcCCCCCCCEEEEECC
Confidence            99   56666 554444

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.41  E-value=2e-06  Score=88.08  Aligned_cols=93  Identities=15%  Similarity=0.114  Sum_probs=68.5

Q ss_pred             eccCcccEEEEEEcCCCc-EEEEE---------CCCcEEEEcCCC---------------CCCCCCCCEEEEEECCCeEE
Q psy7057           8 LYGHSMDVRSLSVTPDGC-ILSAS---------RDKSAKLWKPND---------------LSPGAKVNTLLSASWDMTAK   62 (557)
Q Consensus         8 l~gH~~~V~~l~~spdg~-l~sgs---------~Dg~V~iWd~~~---------------~~~~~~~~~l~sgs~Dg~i~   62 (557)
                      |..|...|.++.|||||+ |+.++         .++.+.+||+.+               ..++|++..|+.. .++.+.
T Consensus        57 ~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d~~~~~~~~l~~~~~~~~~~~~SPDG~~ia~~-~~~~l~  135 (470)
T d2bgra1          57 FDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYV-WNNDIY  135 (470)
T ss_dssp             TTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEE-ETTEEE
T ss_pred             hhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEEEECCCCcccccccCCccccccccccCcceeeEe-ecccce
Confidence            455678899999999998 77664         357889999987               5678899999885 567899


Q ss_pred             EEECCCCeEEEEEccc------------------CCcEEEEEEcCCC-EEEEEECCCe
Q psy7057          63 LWCLESQQCKLTIRQH------------------EMAVWGVIQLANG-IIVTGCADKT  101 (557)
Q Consensus        63 iwd~~~~~~~~~l~~h------------------~~~V~~l~~~~~~-~l~sgs~dg~  101 (557)
                      +|+..+++.......+                  ......+.|+|+| .|+....|.+
T Consensus       136 ~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~~~~wSPDGk~ia~~~~d~~  193 (470)
T d2bgra1         136 VKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDT  193 (470)
T ss_dssp             EESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECT
T ss_pred             EEECCCCceeeeeeccCCCcccccccceeeeeeecCCccccEECCCCCccceeEecCC
Confidence            9999888765443221                  1233557899999 7777765533

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=98.41  E-value=6.8e-05  Score=70.89  Aligned_cols=225  Identities=16%  Similarity=0.220  Sum_probs=140.8

Q ss_pred             CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcc------cCCcEEEEEEcCC-C-EEE-EEECCCeEEEEeCCCcEEE
Q psy7057          43 LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQ------HEMAVWGVIQLAN-G-IIV-TGCADKTIKLHSEEGEFLK  113 (557)
Q Consensus        43 ~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~------h~~~V~~l~~~~~-~-~l~-sgs~dg~I~vwd~~~~~~~  113 (557)
                      ++.+++++.+++-.....|++||.+ ++.+..+..      .......+++.++ + .++ ..+.++.|.+++..+....
T Consensus        28 vavd~dg~i~VaD~~n~rI~v~d~~-G~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~  106 (279)
T d1q7fa_          28 VAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQFVR  106 (279)
T ss_dssp             EEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTTSCEEE
T ss_pred             EEEcCCCCEEEEECCCCEEEEEeCC-CCEEEEecccCCCcccccccccccccccccccceeccCCcccccccccccccee
Confidence            3445556666666667889999854 666666632      1223455665554 3 333 3345567888888888877


Q ss_pred             EEe-CCCCCEEEEEEeCCCeEE-EEECCCeEEEEECCCCeEEEEEe--CCCCcEEEEEE--cCCEEEEEeCCCeEEEEEC
Q psy7057         114 TLT-GHTDCVRGLAVLNDTDFV-SCSNDASIRVWDSTTGKCVHTMY--GHPNFIYSVAA--HGDLITSGGEDQCVCVYQN  187 (557)
Q Consensus       114 ~l~-~h~~~V~~l~~~~~~~lv-s~s~Dg~I~vwd~~~~~~~~~~~--~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~  187 (557)
                      .+. ........+++.+++.++ +....+.+.+++ .+++.+.++.  .+......+++  +++.+++....+.|++|+.
T Consensus       107 ~~~~~~~~~p~~~avd~~G~i~v~~~~~~~~~~~~-~~g~~~~~~g~~~~~~~~~~i~~d~~g~i~v~d~~~~~V~~~d~  185 (279)
T d1q7fa_         107 KFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFD-QNGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY  185 (279)
T ss_dssp             EECTTTCSCEEEEEECTTSCEEEEETTTTEEEEEC-TTSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEET
T ss_pred             ecCCCcccccceeccccCCcEEEEeeccceeeEec-cCCceeecccccccccccceeeeccceeEEeeeccccceeeeec
Confidence            764 345668899999888855 545567788888 4577777763  35567778887  4557777778899999996


Q ss_pred             CCC--ceEe--eCCccEEEEEEcCCCcEEEEE--cCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeC
Q psy7057         188 KAQ--NSFM--IPAMSVWAVAILPNSDIVTGS--SDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSD  261 (557)
Q Consensus       188 ~~~--~~~~--~~~~~v~~v~~~p~g~l~sg~--~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~  261 (557)
                      ...  .++.  ........+++.++|.++.+.  .++.|.+|+.+. +................++..++..  ++..+.
T Consensus       186 ~G~~~~~~g~~g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~~~G-~~~~~~~~~~~~~~p~~vav~~dG~--l~V~~~  262 (279)
T d1q7fa_         186 EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDG-QLISALESKVKHAQCFDVALMDDGS--VVLASK  262 (279)
T ss_dssp             TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTS-CEEEEEEESSCCSCEEEEEEETTTE--EEEEET
T ss_pred             CCceeeeecccccccCCcccccccCCeEEEEECCCCcEEEEECCCC-CEEEEEeCCCCCCCEeEEEEeCCCc--EEEEeC
Confidence            544  2221  123357899999999955443  345799998553 3221111111112344555544433  344557


Q ss_pred             CCcEEEEecCC
Q psy7057         262 DGIVRVFSANP  272 (557)
Q Consensus       262 DG~IrvW~~~~  272 (557)
                      +..|++|....
T Consensus       263 n~~v~~fr~~~  273 (279)
T d1q7fa_         263 DYRLYIYRYVQ  273 (279)
T ss_dssp             TTEEEEEECSC
T ss_pred             CCeEEEEEeee
Confidence            88899998654

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.38  E-value=3.6e-06  Score=86.10  Aligned_cols=101  Identities=7%  Similarity=-0.052  Sum_probs=80.0

Q ss_pred             ECCCeEEEEECCCCeEEEEEcc-----cCCcEEEEEEcCCC-EEEEEEC---------CCeEEEEeCCCcEEEEEeCCCC
Q psy7057          56 SWDMTAKLWCLESQQCKLTIRQ-----HEMAVWGVIQLANG-IIVTGCA---------DKTIKLHSEEGEFLKTLTGHTD  120 (557)
Q Consensus        56 s~Dg~i~iwd~~~~~~~~~l~~-----h~~~V~~l~~~~~~-~l~sgs~---------dg~I~vwd~~~~~~~~l~~h~~  120 (557)
                      ..++.+.+||+.+++....+..     |...|.++.|+||+ .|+.++.         ++.+.+||..+..+..+..|..
T Consensus        33 ~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d~~~~~~~~l~~~~~  112 (470)
T d2bgra1          33 KQENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPN  112 (470)
T ss_dssp             ESSSCEEEEETTTCCEEEEECTTTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCT
T ss_pred             EcCCcEEEEECCCCCEEEEEchhhhhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEEEECCCCcccccccCCc
Confidence            3467788899888877665544     45789999999999 6776643         4678899988888888899999


Q ss_pred             CEEEEEEeCCCeEEEEECCCeEEEEECCCCeEEEEE
Q psy7057         121 CVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTM  156 (557)
Q Consensus       121 ~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~~~~~~  156 (557)
                      .+..+.|+|+|+.++-..++.+.+|+..+++..+..
T Consensus       113 ~~~~~~~SPDG~~ia~~~~~~l~~~~~~~g~~~~~t  148 (470)
T d2bgra1         113 NTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRIT  148 (470)
T ss_dssp             TEEEEEECSSTTCEEEEETTEEEEESSTTSCCEECC
T ss_pred             cccccccccCcceeeEeecccceEEECCCCceeeee
Confidence            999999999998554466789999999888765543

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=98.30  E-value=9.9e-05  Score=72.78  Aligned_cols=217  Identities=10%  Similarity=0.083  Sum_probs=125.7

Q ss_pred             CcccEEEEEEcCCCc-EEEEECCCcEEEEcCCC------------------CCCCCCCCEEE--EEE-CCCeEEEEECCC
Q psy7057          11 HSMDVRSLSVTPDGC-ILSASRDKSAKLWKPND------------------LSPGAKVNTLL--SAS-WDMTAKLWCLES   68 (557)
Q Consensus        11 H~~~V~~l~~spdg~-l~sgs~Dg~V~iWd~~~------------------~~~~~~~~~l~--sgs-~Dg~i~iwd~~~   68 (557)
                      +...+.-|+|+|+++ |.++ ..+.+..|.+..                  +.++++++.+.  ++. ..+++..+.+..
T Consensus        38 ~~~~~s~la~s~d~~~ly~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~p~~v~~~~~~~~~~v~~a~~~~~~v~~~~~~~  116 (365)
T d1jofa_          38 QDEPISWMTFDHERKNIYGA-AMKKWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYK  116 (365)
T ss_dssp             TTCCCSEEEECTTSSEEEEE-EBTEEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESS
T ss_pred             CCCCCCEEEEcCCCCEEEEE-eCCcEEEEEEeCCCCeEEEeeecCCCCcEEEEECCCCCEEEEEEecCCCCEEEEeEccC
Confidence            445567799999998 4444 446677775543                  55666676433  322 234555443321


Q ss_pred             -------------CeE---EEE-EcccCCcEEEEEEcCCC-EEEEEEC-CCeEEEEe--CCCcEE--EEEe--CCCCCEE
Q psy7057          69 -------------QQC---KLT-IRQHEMAVWGVIQLANG-IIVTGCA-DKTIKLHS--EEGEFL--KTLT--GHTDCVR  123 (557)
Q Consensus        69 -------------~~~---~~~-l~~h~~~V~~l~~~~~~-~l~sgs~-dg~I~vwd--~~~~~~--~~l~--~h~~~V~  123 (557)
                                   +..   ... -+.....+.++.|+|+| .+++++. ...|.+|+  .++...  ....  ......+
T Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~q~~~h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~~~~g~gPr  196 (365)
T d1jofa_         117 FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPR  196 (365)
T ss_dssp             SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEE
T ss_pred             CCCcceeEeeeecceecCcccCcccCCCCcceEEEECCCCCEEEEeeCCCCEEEEEEccCCCceeeccceeecCCCCceE
Confidence                         111   111 11223457899999999 5555543 45788876  334332  2222  3456789


Q ss_pred             EEEEeCCCeE--EEEECCCeEEEEECCCCe--EEEEEeC-----------------CCCcEEEEEE--cCCEEEEEeC-C
Q psy7057         124 GLAVLNDTDF--VSCSNDASIRVWDSTTGK--CVHTMYG-----------------HPNFIYSVAA--HGDLITSGGE-D  179 (557)
Q Consensus       124 ~l~~~~~~~l--vs~s~Dg~I~vwd~~~~~--~~~~~~~-----------------h~~~V~~l~~--~~~~l~s~s~-D  179 (557)
                      .++|+|++++  ++.-.+++|.+|++..++  .+.....                 +......+.+  +|++|+++.. +
T Consensus       197 ~i~f~pdg~~~yv~~e~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~  276 (365)
T d1jofa_         197 WVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRAN  276 (365)
T ss_dssp             EEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEES
T ss_pred             EEEECCCCceEEEeccCCCEEEEEEecCCCceEEEEeeeeccccccccccccccccccCCccceEECCCCCEEEEEcccC
Confidence            9999999873  466678999999986543  2222110                 1112345555  7888776532 2


Q ss_pred             -----CeEEEEECCCC---ce-Ee-----eCCccEEEEEEcC-CCc-EE-EEEcCCcEEEEecCCC
Q psy7057         180 -----QCVCVYQNKAQ---NS-FM-----IPAMSVWAVAILP-NSD-IV-TGSSDGIVRVFSANPD  228 (557)
Q Consensus       180 -----g~I~iwd~~~~---~~-~~-----~~~~~v~~v~~~p-~g~-l~-sg~~Dg~I~iwd~~~~  228 (557)
                           ..|..|+....   .. ..     ......+.++++| +|+ |+ +...++.|.+|+++..
T Consensus       277 ~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~G~~p~~i~~~p~~G~~l~va~~~s~~v~v~~~~~~  342 (365)
T d1jofa_         277 KFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE  342 (365)
T ss_dssp             STTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred             CCccceEEEEEEecCCCceeeEeEeeEEEcCCCCccEEEecCCCCCEEEEEeCCCCeEEEEEEeCC
Confidence                 24777775443   11 11     1123467799998 677 44 4456899999988654

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=98.27  E-value=2.4e-06  Score=86.34  Aligned_cols=178  Identities=8%  Similarity=-0.024  Sum_probs=113.2

Q ss_pred             CCCCEEEEE-ECCCeEEEEECCCCeEEEEEc-ccCCcEEEEEEcCCC---EEEEEECCCe-----------------EEE
Q psy7057          47 AKVNTLLSA-SWDMTAKLWCLESQQCKLTIR-QHEMAVWGVIQLANG---IIVTGCADKT-----------------IKL  104 (557)
Q Consensus        47 ~~~~~l~sg-s~Dg~i~iwd~~~~~~~~~l~-~h~~~V~~l~~~~~~---~l~sgs~dg~-----------------I~v  104 (557)
                      ++|++|++. ..+.+|.++|+.++++...+. .+...+..++|+|++   +++..+.+..                 +..
T Consensus        81 pDGr~lfV~d~~~~rVavIDl~t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~~~  160 (441)
T d1qnia2          81 YDGKYLFINDKANTRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTA  160 (441)
T ss_dssp             EEEEEEEEEETTTTEEEEEETTTTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEEEE
T ss_pred             CCCCEEEEEcCCCCEEEEEECCCCcEeeEEecCCCCCccceEEeccCCEEEEEeccCCcccccCcccccccccccceEEe
Confidence            456777555 467899999999999887764 467789999999987   3444444322                 233


Q ss_pred             Ee-CCCcEEEEEeCCCCCEEEEEEeCCCeEE-EEEC-----------------------------------------CCe
Q psy7057         105 HS-EEGEFLKTLTGHTDCVRGLAVLNDTDFV-SCSN-----------------------------------------DAS  141 (557)
Q Consensus       105 wd-~~~~~~~~l~~h~~~V~~l~~~~~~~lv-s~s~-----------------------------------------Dg~  141 (557)
                      +| .+.+....+.. ...+..+.++|+++.+ +++.                                         ++.
T Consensus       161 iD~~t~~v~~qI~v-~~~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n~p~~~~~~~dGk~~~v~~~~v  239 (441)
T d1qnia2         161 IDAETMDVAWQVIV-DGNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVKAGNFKTIGDSKV  239 (441)
T ss_dssp             EETTTCSEEEEEEE-SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEHHHHHHHHHTTCCBCCTTCCC
T ss_pred             ecCccceeeEEEec-CCCccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeCCccceEEEecCCCEEEeCCCCc
Confidence            55 33444444432 2346778888988733 3332                                         234


Q ss_pred             EEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEE-EEEeCCCeEEEEECCCCc-----------eEeeCC---ccEEEEE
Q psy7057         142 IRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLI-TSGGEDQCVCVYQNKAQN-----------SFMIPA---MSVWAVA  204 (557)
Q Consensus       142 I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l-~s~s~Dg~I~iwd~~~~~-----------~~~~~~---~~v~~v~  204 (557)
                      +.+++....+.+..+..... ...+.+  +|+++ +++..+++|.+||+.+..           .+....   -.....+
T Consensus       240 ~vvd~~~~~~v~~~IPvgks-PhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~~~~~~~~~~~~~~~~~~~~glgplh~~  318 (441)
T d1qnia2         240 PVVDGRGESEFTRYIPVPKN-PHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDKIELRDTIVAEPELGLGPLHTT  318 (441)
T ss_dssp             CEEECSSSCSSEEEECCBSS-CCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHTTTSSCGGGGEEECCBCCSCEEEEE
T ss_pred             EEEEcccCCceEEEEeCCCC-ccCceECCCCCEEEEeCCcCCcEEEEEeehhhhHhhccCCcceEEEeecccccCcccce
Confidence            45555444455566654333 334555  88865 566789999999965431           111111   1245568


Q ss_pred             EcCCCc-EEEEEcCCcEEEEecC
Q psy7057         205 ILPNSD-IVTGSSDGIVRVFSAN  226 (557)
Q Consensus       205 ~~p~g~-l~sg~~Dg~I~iwd~~  226 (557)
                      |.++|. +.+..-|..|..|++.
T Consensus       319 fd~~g~~yts~~~ds~v~kw~~~  341 (441)
T d1qnia2         319 FDGRGNAYTTLFIDSQVCKWNIA  341 (441)
T ss_dssp             ECSSSEEEEEETTTTEEEEEEHH
T ss_pred             ecCCceEEEcccccceEEEeccc
Confidence            999998 6677789999999984

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=98.21  E-value=0.00024  Score=67.70  Aligned_cols=183  Identities=14%  Similarity=0.090  Sum_probs=124.6

Q ss_pred             CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeC---CCcEEEEE-eC
Q psy7057          43 LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSE---EGEFLKTL-TG  117 (557)
Q Consensus        43 ~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~---~~~~~~~l-~~  117 (557)
                      +++.++++++++...+++|..|+....  ...+......+.++++.++| ++++...++.+..++.   .+...... ..
T Consensus        33 iAv~pdG~l~vt~~~~~~I~~i~p~g~--~~~~~~~~~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~  110 (302)
T d2p4oa1          33 LASAPDGTIFVTNHEVGEIVSITPDGN--QQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLP  110 (302)
T ss_dssp             EEECTTSCEEEEETTTTEEEEECTTCC--EEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECT
T ss_pred             EEECCCCCEEEEeCCCCEEEEEeCCCC--EEEEEcCCCCcceEEEcCCCCeEEEecCCceEEEEEecccccceeeccccC
Confidence            567788999999999999999986543  23344566789999999998 7777778888887772   23322222 23


Q ss_pred             CCCCEEEEEEeCCCeEE-EEECCCeEEEEECCCCeEEEEEeC----------CCCcEEEEEEcCC-EEEEEeCCCeEEEE
Q psy7057         118 HTDCVRGLAVLNDTDFV-SCSNDASIRVWDSTTGKCVHTMYG----------HPNFIYSVAAHGD-LITSGGEDQCVCVY  185 (557)
Q Consensus       118 h~~~V~~l~~~~~~~lv-s~s~Dg~I~vwd~~~~~~~~~~~~----------h~~~V~~l~~~~~-~l~s~s~Dg~I~iw  185 (557)
                      .......+++.+++.++ +.+.++.+..++...+........          .......+.+++. ++++.+..+.|+.+
T Consensus       111 ~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ngi~~~~~~l~~~~~~~~~i~~~  190 (302)
T d2p4oa1         111 DAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNTEKMLLLRI  190 (302)
T ss_dssp             TCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEETTTTEEEEE
T ss_pred             CccccceeEEccCCCEEeeccccccceeeeccCCcceeEecCCccceeeccCcccccccccccCCceeeecCCCCeEEec
Confidence            45568899999998855 667788899999877654333221          1234566777665 45566778888888


Q ss_pred             ECCCC-----ceEeeCCccEEEEEEcCCCcE-EEEEcCCcEEEEecCC
Q psy7057         186 QNKAQ-----NSFMIPAMSVWAVAILPNSDI-VTGSSDGIVRVFSANP  227 (557)
Q Consensus       186 d~~~~-----~~~~~~~~~v~~v~~~p~g~l-~sg~~Dg~I~iwd~~~  227 (557)
                      +....     ............+++.++|.+ ++...++.|..++...
T Consensus       191 ~~~~~~~~~~~~~~~~~~~pdgia~d~dG~l~va~~~~~~V~~i~p~G  238 (302)
T d2p4oa1         191 PVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPDR  238 (302)
T ss_dssp             EBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTTC
T ss_pred             cccccccccccccccCCCCCcceEECCCCCEEEEEcCCCcEEEECCCC
Confidence            85433     122222334567999999994 4555688888887654

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=98.14  E-value=0.00022  Score=66.08  Aligned_cols=197  Identities=12%  Similarity=0.044  Sum_probs=112.8

Q ss_pred             eccCcccEEEEEEcCCCc-EEEEE-CCC--cEEEEcCCC---------------CCCCCCCCEEEEEECC-Ce--EEEEE
Q psy7057           8 LYGHSMDVRSLSVTPDGC-ILSAS-RDK--SAKLWKPND---------------LSPGAKVNTLLSASWD-MT--AKLWC   65 (557)
Q Consensus         8 l~gH~~~V~~l~~spdg~-l~sgs-~Dg--~V~iWd~~~---------------~~~~~~~~~l~sgs~D-g~--i~iwd   65 (557)
                      +..+...+.+-+|||||+ ||-.+ ..+  .+.+.+...               ..+++++..++..+.. +.  +..+.
T Consensus        34 l~~~~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~  113 (269)
T d2hqsa1          34 VHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMD  113 (269)
T ss_dssp             EEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred             EecCCCceeeeEECCCCCEEEEEEeeccCcceeeeecccCceeEEeeeecccccceecCCCCeeeEeeecCCccceeecc
Confidence            334567788899999998 76443 333  244445443               4556677777665543 22  22222


Q ss_pred             CCCCeEEEEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEE--eCCCcEEEEEeCCCCCEEEEEEeCCCe-EE-EEECC
Q psy7057          66 LESQQCKLTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLH--SEEGEFLKTLTGHTDCVRGLAVLNDTD-FV-SCSND  139 (557)
Q Consensus        66 ~~~~~~~~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vw--d~~~~~~~~l~~h~~~V~~l~~~~~~~-lv-s~s~D  139 (557)
                      ...... ..............+++++  .+++...++...+|  +..+.....+..+........++|++. ++ +....
T Consensus       114 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~  192 (269)
T d2hqsa1         114 LASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNG  192 (269)
T ss_dssp             TTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECS
T ss_pred             cccccc-eeeeeccccccccccccccccceecccccCCceEeeeecccccceeeecccccccccccccccceeEEEeecC
Confidence            222222 2222334444455566655  55566666654444  455555556666667778889999987 44 44444


Q ss_pred             CeEE--EEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeC---CCeEEEEECCCC--ceEeeCCccEEEEEEcC
Q psy7057         140 ASIR--VWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGE---DQCVCVYQNKAQ--NSFMIPAMSVWAVAILP  207 (557)
Q Consensus       140 g~I~--vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~---Dg~I~iwd~~~~--~~~~~~~~~v~~v~~~p  207 (557)
                      +...  +.+...+..  .+..+........|  +|+.|+-.+.   ...|+++++...  ..+......+...+|+|
T Consensus       193 ~~~~i~~~~~~~~~~--~~~~~~~~~~~p~~SPDG~~i~f~s~~~~~~~l~~~~~dg~~~~~lt~~~g~~~~p~WSP  267 (269)
T d2hqsa1         193 GQQHIAKQDLATGGV--QVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWSP  267 (269)
T ss_dssp             SCEEEEEEETTTCCE--EECCCSSSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEECCCSSSEEEEEEECC
T ss_pred             CceeeeEeecccccc--eEeecCccccceEECCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEeCCCCcEEeEEeCC
Confidence            4444  445444443  33334555566667  7887654332   346788887655  45555556678888988

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.12  E-value=0.00088  Score=64.31  Aligned_cols=204  Identities=9%  Similarity=0.063  Sum_probs=126.4

Q ss_pred             cccEEEEEEcCCCcEE-EEECCCcEEEEcCCC----------------CCCCCCCCEEEEEECC----CeEEEEECCCCe
Q psy7057          12 SMDVRSLSVTPDGCIL-SASRDKSAKLWKPND----------------LSPGAKVNTLLSASWD----MTAKLWCLESQQ   70 (557)
Q Consensus        12 ~~~V~~l~~spdg~l~-sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sgs~D----g~i~iwd~~~~~   70 (557)
                      ...+..++|.++|+|+ +-...+.|..|+...                +++++++.++++...+    +.+...+.....
T Consensus        39 ~~~lEG~~~D~~G~Ly~~D~~~g~I~ri~p~g~~~~~~~~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~~~~~  118 (319)
T d2dg1a1          39 GLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDN  118 (319)
T ss_dssp             CCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCS
T ss_pred             CcCcEeCEECCCCCEEEEECCCCEEEEEECCCCeEEEEEeCCCCCeeEEEECCCCCEEEEecCCCccceeEEEEcCCCce
Confidence            3345789999999955 555788899898765                4556677766665432    334444444444


Q ss_pred             EEEEEcc--cCCcEEEEEEcCCCEEEEEECC-------CeEEEEeCCCcEEEEEeCCCCCEEEEEEeCCCe-E-EEEECC
Q psy7057          71 CKLTIRQ--HEMAVWGVIQLANGIIVTGCAD-------KTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTD-F-VSCSND  139 (557)
Q Consensus        71 ~~~~l~~--h~~~V~~l~~~~~~~l~sgs~d-------g~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~~~-l-vs~s~D  139 (557)
                      .......  -......+++.++|.+..+...       +.+..++..+..+..+...-...+.|+|+|++. | ++-+..
T Consensus       119 ~~~~~~~~~~~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~dg~~~~~~~~~~~~pnGia~s~dg~~lyvad~~~  198 (319)
T d2dg1a1         119 LQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTA  198 (319)
T ss_dssp             CEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGG
T ss_pred             eeeeccCCCcccCCcceeEEeccceeecccccccccCcceeEEEecccceeEEEeeccceeeeeeeccccceEEEecccC
Confidence            3333322  1345778999999955555432       235555666655544443344578899999975 4 566778


Q ss_pred             CeEEEEECCCC-e---EEE----EEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC--ceEeeCC------ccEE
Q psy7057         140 ASIRVWDSTTG-K---CVH----TMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ--NSFMIPA------MSVW  201 (557)
Q Consensus       140 g~I~vwd~~~~-~---~~~----~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~--~~~~~~~------~~v~  201 (557)
                      +.|..|++... .   ...    ...........|++  +|+++++....+.|.+|+....  ..+..+.      ..+.
T Consensus       199 ~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~p~G~~l~~i~~P~~~~~~~~~~~  278 (319)
T d2dg1a1         199 NRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGYPIGQILIPGRDEGHMLRST  278 (319)
T ss_dssp             TEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECTTSCEEEEEECTTGGGTCSCBCC
T ss_pred             CceEEEEEcCCCceeccccceeeeccCCccceeeeeEcCCCCEEEEEcCCCEEEEECCCCcEEEEEeCCCcCCCcCceee
Confidence            89999987532 1   111    11111233456777  6778888888999999995432  4444332      2467


Q ss_pred             EEEEcCCCc-EEEEE
Q psy7057         202 AVAILPNSD-IVTGS  215 (557)
Q Consensus       202 ~v~~~p~g~-l~sg~  215 (557)
                      +++|.|.+. +++..
T Consensus       279 ~~~~~~~~~~~~~t~  293 (319)
T d2dg1a1         279 HPQFIPGTNQLIICS  293 (319)
T ss_dssp             EEEECTTSCEEEEEE
T ss_pred             eEEEeCCCCEEEEEc
Confidence            999998776 44443

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.01  E-value=0.00013  Score=68.00  Aligned_cols=224  Identities=10%  Similarity=0.033  Sum_probs=118.0

Q ss_pred             CCCCCCEEEEE-ECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcEEEEEeCCCCCE
Q psy7057          45 PGAKVNTLLSA-SWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFLKTLTGHTDCV  122 (557)
Q Consensus        45 ~~~~~~~l~sg-s~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~~~l~~h~~~V  122 (557)
                      .+++++..++. +..+.+..++............-......+++.+++ ++++....+.+++++................
T Consensus        21 vd~dG~i~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~gvav~~~g~i~v~d~~~~~i~~~~~~~~~~~~~~~~~~~p  100 (260)
T d1rwia_          21 VDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYP  100 (260)
T ss_dssp             ECTTCCEEEEECSSSCEEEEEC----CEEECCCCSCCSCCCEEECTTCCEEEEETTTEEEEECTTCSCCEECCCCSCCSE
T ss_pred             EcCCCCEEEEEcCCCCEEEEEcCCCceEEEeccCCccCceEEEEcCCCCEEEeeeeeceeeeeeeccceeeeeeeeeeec
Confidence            34455655543 334566666544332222111122345678899988 5555545555555542222211112223567


Q ss_pred             EEEEEeCCCeEE-EEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCCceEe---eC
Q psy7057         123 RGLAVLNDTDFV-SCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQNSFM---IP  196 (557)
Q Consensus       123 ~~l~~~~~~~lv-s~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~~~~~---~~  196 (557)
                      .++++.+++.++ +-.....+..++............-.....++++  +++.+++...++.|..++........   ..
T Consensus       101 ~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~~~v~~~~~~~i~~~d~~~~~~~~~~~~~  180 (260)
T d1rwia_         101 EGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTD  180 (260)
T ss_dssp             EEEEECTTCCEEEEEGGGTEEEEECTTCSSCEECCCCSCCSCCEEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSS
T ss_pred             ccccccccceeEeeccccccccccccccceeeeeeecccCCcceeeecCCCCEeeeccccccccccccccceeeeeeccc
Confidence            899999988755 4445556777775443322111112234456777  66777788888899999976552222   22


Q ss_pred             CccEEEEEEcCCCcEEEEE-cCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEEecC
Q psy7057         197 AMSVWAVAILPNSDIVTGS-SDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVFSAN  271 (557)
Q Consensus       197 ~~~v~~v~~~p~g~l~sg~-~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW~~~  271 (557)
                      ......|++.++|.|+++. ..+.|..++......... .. ........++..+.. ...++-..++.|+.++..
T Consensus       181 ~~~p~gi~~d~~g~l~vsd~~~~~i~~~~~~~~~~~~~-~~-~~~~~P~~i~~d~~g-~l~vad~~~~rI~~i~~~  253 (260)
T d1rwia_         181 ITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVL-PF-TGLNTPLAVAVDSDR-TVYVADRGNDRVVKLTSL  253 (260)
T ss_dssp             CCSEEEEEECTTCCEEEEETTTTEEEEECTTCSCCEEC-CC-CSCCCEEEEEECTTC-CEEEEEGGGTEEEEECCC
T ss_pred             cCCCccceeeeeeeeeeeecCCCEEEEEeCCCCeEEEE-cc-CCCCCeEEEEEeCCC-CEEEEECCCCEEEEEeCC
Confidence            3457899999999955444 567788887654332111 11 111223344444433 234554555666655544

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=97.99  E-value=0.00079  Score=64.58  Aligned_cols=210  Identities=11%  Similarity=0.044  Sum_probs=127.1

Q ss_pred             CCeEEEEECCCCeEEEEEccc----CCcEEEEEEcCCC-EEEEEECCCeEEEEeCCCcEEEEEeCCC-----CCEEEEEE
Q psy7057          58 DMTAKLWCLESQQCKLTIRQH----EMAVWGVIQLANG-IIVTGCADKTIKLHSEEGEFLKTLTGHT-----DCVRGLAV  127 (557)
Q Consensus        58 Dg~i~iwd~~~~~~~~~l~~h----~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~~~~~~l~~h~-----~~V~~l~~  127 (557)
                      +++|..||..++.........    ......+++.+++ .++++.....|...+.++.....+....     .....+++
T Consensus        45 ~g~I~r~d~~~~~~~~~~~~~~~~~~g~P~Gl~~~~dg~~l~vad~~~~i~~~~~~g~~~~~~~~~~~g~~~~~pndl~~  124 (314)
T d1pjxa_          45 AGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVVQTDGTFEEIAKKDSEGRRMQGCNDCAF  124 (314)
T ss_dssp             CCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEEEETTSCEEECCSBCTTSCBCBCCCEEEE
T ss_pred             CCEEEEEECCCCcEEEEECCccccCCCcceeEEEeCCCCEEEEEECCCeEEEEeCCCcEEEEEeccccccccCCCcEEEE
Confidence            467888998887654433222    2235689999987 7777877778888887776554443221     13577899


Q ss_pred             eCCCeEEEEEC----------------CCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCC-----EEEEEeCCCeEEE
Q psy7057         128 LNDTDFVSCSN----------------DASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGD-----LITSGGEDQCVCV  184 (557)
Q Consensus       128 ~~~~~lvs~s~----------------Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~-----~l~s~s~Dg~I~i  184 (557)
                      .++|.|..+..                ++.|..++. .++...... .-..-..+++  +++     ++++-+..+.|..
T Consensus       125 d~~G~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~-dg~~~~~~~-~~~~pNGi~~~~d~d~~~~~lyv~d~~~~~i~~  202 (314)
T d1pjxa_         125 DYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTT-DGQMIQVDT-AFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWS  202 (314)
T ss_dssp             CTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECT-TSCEEEEEE-EESSEEEEEEEECTTSCEEEEEEEETTTTEEEE
T ss_pred             CCCCCEEEecCccCcccccccceeccCCceEEEEee-cCceeEeeC-CcceeeeeEECCCCCcceeEEEEEeecccceEE
Confidence            99988654432                234444443 344333222 2223345565  333     4455567888988


Q ss_pred             EECCCCc------eEeeC----CccEEEEEEcCCCcE-EEEEcCCcEEEEecCCCCcchhHHHhcccceeEEEeccCCCc
Q psy7057         185 YQNKAQN------SFMIP----AMSVWAVAILPNSDI-VTGSSDGIVRVFSANPDRQAEDAVQAQYAEEVKKLKSANEQE  253 (557)
Q Consensus       185 wd~~~~~------~~~~~----~~~v~~v~~~p~g~l-~sg~~Dg~I~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~  253 (557)
                      |++....      .+...    ......+++..+|.| ++....+.|.+|+.+.+.......  ......+.+++.++..
T Consensus       203 ~d~~~~g~~~~~~~~~~~~~~~~~~pdGiavD~~GnlyVa~~~~g~I~~~dp~~g~~~~~i~--~p~~~~t~~afg~d~~  280 (314)
T d1pjxa_         203 YDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIR--CPFEKPSNLHFKPQTK  280 (314)
T ss_dssp             EEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEE--CSSSCEEEEEECTTSS
T ss_pred             eeccCccccceeeEEEEccccccccceeeEEecCCcEEEEEcCCCEEEEEeCCCCEEEEEEE--CCCCCEEEEEEeCCCC
Confidence            8854321      11111    123567999999994 555568889999977655432111  1223456677766555


Q ss_pred             eeEEEEeCCCcEEEEecC
Q psy7057         254 IGGVKVSDDGIVRVFSAN  271 (557)
Q Consensus       254 ~~~vs~s~DG~IrvW~~~  271 (557)
                      ...|+.+.+|.|..+++.
T Consensus       281 ~lyVt~~~~g~i~~~~~~  298 (314)
T d1pjxa_         281 TIFVTEHENNAVWKFEWQ  298 (314)
T ss_dssp             EEEEEETTTTEEEEEECS
T ss_pred             EEEEEECCCCcEEEEECC
Confidence            566888888888877754

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=97.79  E-value=0.0003  Score=69.20  Aligned_cols=257  Identities=8%  Similarity=0.070  Sum_probs=134.0

Q ss_pred             CcccEEEEEEcCCCc-E--E-EEE--CCCcEEEEcCCCCCCCCCCCEEEEEECCCeEEEEECCCCeEEEEE--cccCCcE
Q psy7057          11 HSMDVRSLSVTPDGC-I--L-SAS--RDKSAKLWKPNDLSPGAKVNTLLSASWDMTAKLWCLESQQCKLTI--RQHEMAV   82 (557)
Q Consensus        11 H~~~V~~l~~spdg~-l--~-sgs--~Dg~V~iWd~~~~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l--~~h~~~V   82 (557)
                      +.+.|..+.|..+.. |  + ...  .++.+     .-+.+++++++|.+++. +.+..|.+.....+..+  .......
T Consensus        12 ~~~~i~~~~fd~~~~~l~~~~~~~~~~~~~~-----s~la~s~d~~~ly~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~p   85 (365)
T d1jofa_          12 PPGAIFTVQFDDEKLTCKLIKRTEIPQDEPI-----SWMTFDHERKNIYGAAM-KKWSSFAVKSPTEIVHEASHPIGGHP   85 (365)
T ss_dssp             SSCEEEEEEEETTTTEEEEEEEEECCTTCCC-----SEEEECTTSSEEEEEEB-TEEEEEEEEETTEEEEEEEEECCSSG
T ss_pred             CCCCEEEEEEcCCCCeEEEeeeeeccCCCCC-----CEEEEcCCCCEEEEEeC-CcEEEEEEeCCCCeEEEeeecCCCCc
Confidence            345688888887653 2  1 000  01000     01667788999888765 45777766532222222  1122334


Q ss_pred             EEEEEcCCC-E-EEEEE--CCCeEEEEe--------------CCCcE---EEE-EeCCCCCEEEEEEeCCCe-EEEEE-C
Q psy7057          83 WGVIQLANG-I-IVTGC--ADKTIKLHS--------------EEGEF---LKT-LTGHTDCVRGLAVLNDTD-FVSCS-N  138 (557)
Q Consensus        83 ~~l~~~~~~-~-l~sgs--~dg~I~vwd--------------~~~~~---~~~-l~~h~~~V~~l~~~~~~~-lvs~s-~  138 (557)
                      +.+++++++ . +++..  ..+.+..+.              ..+..   ... .......+.++.++|+++ +++++ .
T Consensus        86 ~~v~~~~~~~~~~v~~a~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~h~h~v~~sPdG~~l~v~d~g  165 (365)
T d1jofa_          86 RANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLT  165 (365)
T ss_dssp             GGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT
T ss_pred             EEEEECCCCCEEEEEEecCCCCEEEEeEccCCCCcceeEeeeecceecCcccCcccCCCCcceEEEECCCCCEEEEeeCC
Confidence            556667777 2 23222  234444433              11111   111 112233578999999988 44443 3


Q ss_pred             CCeEEEEECCC-CeEE--EEEe--CCCCcEEEEEE--cCCEEE-EEeCCCeEEEEECCCC--ceEee-------------
Q psy7057         139 DASIRVWDSTT-GKCV--HTMY--GHPNFIYSVAA--HGDLIT-SGGEDQCVCVYQNKAQ--NSFMI-------------  195 (557)
Q Consensus       139 Dg~I~vwd~~~-~~~~--~~~~--~h~~~V~~l~~--~~~~l~-s~s~Dg~I~iwd~~~~--~~~~~-------------  195 (557)
                      ...|.+|+... ++..  ....  ......+.+++  ++++++ +.-.+++|.+|+....  ..+..             
T Consensus       166 ~d~v~~~~~~~~g~~~~~~~~~~~~~g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (365)
T d1jofa_         166 ANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPD  245 (365)
T ss_dssp             TTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCC
T ss_pred             CCEEEEEEccCCCceeeccceeecCCCCceEEEEECCCCceEEEeccCCCEEEEEEecCCCceEEEEeeeeccccccccc
Confidence            45788887543 3322  2222  23567888999  666654 5556889999985433  11100             


Q ss_pred             -------CCccEEEEEEcCCCc-EEEEE-cCC-----cEEEEecCCCCcchhHHH----hcccceeEEEeccC-CCceeE
Q psy7057         196 -------PAMSVWAVAILPNSD-IVTGS-SDG-----IVRVFSANPDRQAEDAVQ----AQYAEEVKKLKSAN-EQEIGG  256 (557)
Q Consensus       196 -------~~~~v~~v~~~p~g~-l~sg~-~Dg-----~I~iwd~~~~~~~~~~~~----~~~~~~v~~l~~~~-~~~~~~  256 (557)
                             .......+.++|+|+ ++++. .+.     .|..|++...........    .........+.+.+ .....+
T Consensus       246 ~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~G~~p~~i~~~p~~G~~l~  325 (365)
T d1jofa_         246 RDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMA  325 (365)
T ss_dssp             BCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEE
T ss_pred             cccccccccCCccceEECCCCCEEEEEcccCCCccceEEEEEEecCCCceeeEeEeeEEEcCCCCccEEEecCCCCCEEE
Confidence                   011356789999999 44432 222     377777765322111000    00111223355554 345455


Q ss_pred             EEEeCCCcEEEEecCCC
Q psy7057         257 VKVSDDGIVRVFSANPD  273 (557)
Q Consensus       257 vs~s~DG~IrvW~~~~~  273 (557)
                      ++...++.|.||+++.+
T Consensus       326 va~~~s~~v~v~~~~~~  342 (365)
T d1jofa_         326 ITDDQEGWLEIYRWKDE  342 (365)
T ss_dssp             EECSSSCEEEEEEEETT
T ss_pred             EEeCCCCeEEEEEEeCC
Confidence            67778999999987643

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=97.78  E-value=0.006  Score=58.17  Aligned_cols=184  Identities=12%  Similarity=0.087  Sum_probs=114.7

Q ss_pred             CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCCE-EEEEEC----CCeEEEEeCCCcEEEEEeC
Q psy7057          43 LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGI-IVTGCA----DKTIKLHSEEGEFLKTLTG  117 (557)
Q Consensus        43 ~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~~-l~sgs~----dg~I~vwd~~~~~~~~l~~  117 (557)
                      +.+++++++.++-...+.|..|+..++.....+.........+++.++|. +++...    .+.+...+..+..+..+..
T Consensus        45 ~~~D~~G~Ly~~D~~~g~I~ri~p~g~~~~~~~~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~~~~~~~~~~~  124 (319)
T d2dg1a1          45 LNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIE  124 (319)
T ss_dssp             EEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEEC
T ss_pred             CEECCCCCEEEEECCCCEEEEEECCCCeEEEEEeCCCCCeeEEEECCCCCEEEEecCCCccceeEEEEcCCCceeeeecc
Confidence            34556688777777889999999888766666666667788999999994 444332    2334445544443333332


Q ss_pred             C---CCCEEEEEEeCCCeEEEEECC-------CeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEE-EEEeCCCeEEE
Q psy7057         118 H---TDCVRGLAVLNDTDFVSCSND-------ASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLI-TSGGEDQCVCV  184 (557)
Q Consensus       118 h---~~~V~~l~~~~~~~lvs~s~D-------g~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l-~s~s~Dg~I~i  184 (557)
                      +   ......+++.++|.|..+...       +.+..++.. ++.+..+...-.....|++  +++.| ++-+..+.|+.
T Consensus       125 ~~~~~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~d-g~~~~~~~~~~~~pnGia~s~dg~~lyvad~~~~~I~~  203 (319)
T d2dg1a1         125 DLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPD-FRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHR  203 (319)
T ss_dssp             SSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTT-SCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEE
T ss_pred             CCCcccCCcceeEEeccceeecccccccccCcceeEEEecc-cceeEEEeeccceeeeeeeccccceEEEecccCCceEE
Confidence            2   235778999999987655433       235555543 3333333222334567888  56654 56667889999


Q ss_pred             EECCCC----ceE-----eeC--CccEEEEEEcCCCc-EEEEEcCCcEEEEecCC
Q psy7057         185 YQNKAQ----NSF-----MIP--AMSVWAVAILPNSD-IVTGSSDGIVRVFSANP  227 (557)
Q Consensus       185 wd~~~~----~~~-----~~~--~~~v~~v~~~p~g~-l~sg~~Dg~I~iwd~~~  227 (557)
                      |++...    ...     ...  ......+++.++|. +++....+.|.+|+-..
T Consensus       204 ~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~p~G  258 (319)
T d2dg1a1         204 IALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKRG  258 (319)
T ss_dssp             EEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECTTS
T ss_pred             EEEcCCCceeccccceeeeccCCccceeeeeEcCCCCEEEEEcCCCEEEEECCCC
Confidence            985432    111     011  12356799999999 55566789999999653

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.62  E-value=0.012  Score=55.22  Aligned_cols=197  Identities=13%  Similarity=0.099  Sum_probs=118.5

Q ss_pred             EEEEcC-CCcEE-EEECCCcEEEEcCCC--------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcc---
Q psy7057          17 SLSVTP-DGCIL-SASRDKSAKLWKPND--------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQ---   77 (557)
Q Consensus        17 ~l~~sp-dg~l~-sgs~Dg~V~iWd~~~--------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~---   77 (557)
                      +..|.+ ++.|. +=-..+.|..||..+              +.+..++.++ .++.+ .+.++|..+++.......   
T Consensus        22 gp~wd~~~~~l~wvDi~~~~I~r~d~~~g~~~~~~~~~~~~~i~~~~dg~l~-va~~~-gl~~~d~~tg~~~~l~~~~~~   99 (295)
T d2ghsa1          22 GPTFDPASGTAWWFNILERELHELHLASGRKTVHALPFMGSALAKISDSKQL-IASDD-GLFLRDTATGVLTLHAELESD   99 (295)
T ss_dssp             EEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEECSSCEEEEEEEETTEEE-EEETT-EEEEEETTTCCEEEEECSSTT
T ss_pred             CCeEECCCCEEEEEECCCCEEEEEECCCCeEEEEECCCCcEEEEEecCCCEE-EEEeC-ccEEeecccceeeEEeeeecC
Confidence            345665 34443 333455666666554              3344445444 45555 588999998875443321   


Q ss_pred             -cCCcEEEEEEcCCCEEEEEEC-----CCeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCe--EEEEECCCeEEEEECC
Q psy7057          78 -HEMAVWGVIQLANGIIVTGCA-----DKTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTD--FVSCSNDASIRVWDST  148 (557)
Q Consensus        78 -h~~~V~~l~~~~~~~l~sgs~-----dg~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~--lvs~s~Dg~I~vwd~~  148 (557)
                       ....++.+.+.++|.+..++.     .+.-.+|. ..++...... .-.....+++++++.  +++-+..+.|..+++.
T Consensus       100 ~~~~~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~~~g~~~~~~~-~~~~~Ng~~~s~d~~~l~~~dt~~~~I~~~~~d  178 (295)
T d2ghsa1         100 LPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVTKLFA-DISIPNSICFSPDGTTGYFVDTKVNRLMRVPLD  178 (295)
T ss_dssp             CTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEEEEEE-EESSEEEEEECTTSCEEEEEETTTCEEEEEEBC
T ss_pred             CCcccceeeEECCCCCEEEEeccccccccceeEeeecCCcEEEEee-ccCCcceeeecCCCceEEEeecccceeeEeeec
Confidence             124688899999995555542     12334444 2344333333 234567899999875  4477778889988864


Q ss_pred             C------Ce--EEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC--ceEeeCCccEEEEEEc-CCCc--EEE
Q psy7057         149 T------GK--CVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ--NSFMIPAMSVWAVAIL-PNSD--IVT  213 (557)
Q Consensus       149 ~------~~--~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~--~~~~~~~~~v~~v~~~-p~g~--l~s  213 (557)
                      .      ++  ....+.+.......+++  +|++.++.-..+.|..||....  ..+..+...+++++|- |+.+  ++|
T Consensus       179 ~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~GnlWva~~~~g~V~~~dp~G~~~~~i~lP~~~~T~~~FGG~d~~~LyvT  258 (295)
T d2ghsa1         179 ARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTDGNHIARYEVPGKQTTCPAFIGPDASRLLVT  258 (295)
T ss_dssp             TTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTTCCEEEEEECSCSBEEEEEEESTTSCEEEEE
T ss_pred             ccccccccceEEEeccCcccccccceEEcCCCCEEeeeeCCCceEEecCCCcEeeEecCCCCceEEEEEeCCCCCEEEEE
Confidence            2      11  12223344556778888  6677777777889999995433  6666777789999995 5554  445


Q ss_pred             EEc
Q psy7057         214 GSS  216 (557)
Q Consensus       214 g~~  216 (557)
                      ++.
T Consensus       259 ta~  261 (295)
T d2ghsa1         259 SAR  261 (295)
T ss_dssp             EBC
T ss_pred             ECC
Confidence            443

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.51  E-value=0.012  Score=55.32  Aligned_cols=164  Identities=10%  Similarity=0.022  Sum_probs=108.3

Q ss_pred             cccEEEEEEcCCCcEEEEECCCcEEEEcCCC--------------------CCCCCCCCEEEEEEC----CCeEEEEECC
Q psy7057          12 SMDVRSLSVTPDGCILSASRDKSAKLWKPND--------------------LSPGAKVNTLLSASW----DMTAKLWCLE   67 (557)
Q Consensus        12 ~~~V~~l~~spdg~l~sgs~Dg~V~iWd~~~--------------------~~~~~~~~~l~sgs~----Dg~i~iwd~~   67 (557)
                      ...+.++++.++|.|+.++.+| +.++|..+                    +..++++++.++...    .+.-.+|.+.
T Consensus        58 ~~~~~~i~~~~dg~l~va~~~g-l~~~d~~tg~~~~l~~~~~~~~~~~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~~  136 (295)
T d2ghsa1          58 PFMGSALAKISDSKQLIASDDG-LFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA  136 (295)
T ss_dssp             SSCEEEEEEEETTEEEEEETTE-EEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE
T ss_pred             CCCcEEEEEecCCCEEEEEeCc-cEEeecccceeeEEeeeecCCCcccceeeEECCCCCEEEEeccccccccceeEeeec
Confidence            4578899999999977777654 77777665                    234455665554432    2344566666


Q ss_pred             CCeEEEEEcccCCcEEEEEEcCCC--EEEEEECCCeEEEEeCCC-------cE--EEEEeCCCCCEEEEEEeCCCeEEEE
Q psy7057          68 SQQCKLTIRQHEMAVWGVIQLANG--IIVTGCADKTIKLHSEEG-------EF--LKTLTGHTDCVRGLAVLNDTDFVSC  136 (557)
Q Consensus        68 ~~~~~~~l~~h~~~V~~l~~~~~~--~l~sgs~dg~I~vwd~~~-------~~--~~~l~~h~~~V~~l~~~~~~~lvs~  136 (557)
                      .++....+.. -.....+++++++  ++++-+..+.|..++...       +.  ...+.+.......+++..+|.|..+
T Consensus       137 ~g~~~~~~~~-~~~~Ng~~~s~d~~~l~~~dt~~~~I~~~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~GnlWva  215 (295)
T d2ghsa1         137 KGKVTKLFAD-ISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNA  215 (295)
T ss_dssp             TTEEEEEEEE-ESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEE
T ss_pred             CCcEEEEeec-cCCcceeeecCCCceEEEeecccceeeEeeecccccccccceEEEeccCcccccccceEEcCCCCEEee
Confidence            6655444433 3356789999988  566777788898887321       11  1222344556888999888886655


Q ss_pred             E-CCCeEEEEECCCCeEEEEEeCCCCcEEEEEE---cCC-EEEEEeC
Q psy7057         137 S-NDASIRVWDSTTGKCVHTMYGHPNFIYSVAA---HGD-LITSGGE  178 (557)
Q Consensus       137 s-~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~---~~~-~l~s~s~  178 (557)
                      . ..+.|..|| ..++.+..+.-....+++++|   +.+ +++|...
T Consensus       216 ~~~~g~V~~~d-p~G~~~~~i~lP~~~~T~~~FGG~d~~~LyvTta~  261 (295)
T d2ghsa1         216 RWGEGAVDRYD-TDGNHIARYEVPGKQTTCPAFIGPDASRLLVTSAR  261 (295)
T ss_dssp             EETTTEEEEEC-TTCCEEEEEECSCSBEEEEEEESTTSCEEEEEEBC
T ss_pred             eeCCCceEEec-CCCcEeeEecCCCCceEEEEEeCCCCCEEEEEECC
Confidence            4 567899999 578899888876678999999   334 4444443

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=97.32  E-value=0.055  Score=48.90  Aligned_cols=165  Identities=7%  Similarity=0.040  Sum_probs=94.8

Q ss_pred             eEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEECCC---eEEEEeCCCcEEEEEeCCCCCEEEEEEeCCCe-EE
Q psy7057          60 TAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGCADK---TIKLHSEEGEFLKTLTGHTDCVRGLAVLNDTD-FV  134 (557)
Q Consensus        60 ~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~dg---~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~~~-lv  134 (557)
                      .|.|.|...... ..+..+...+.+-+|+||| .|+-.+...   .+.+.+..+.....+..+........|+|++. ++
T Consensus        20 ~l~i~d~dG~~~-~~l~~~~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~   98 (269)
T d2hqsa1          20 ELRVSDYDGYNQ-FVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLA   98 (269)
T ss_dssp             EEEEEETTSCSC-EEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEE
T ss_pred             EEEEEcCCCCCc-EEEecCCCceeeeEECCCCCEEEEEEeeccCcceeeeecccCceeEEeeeecccccceecCCCCeee
Confidence            466667654333 3344456778899999999 666554433   35555666666777777888999999999987 44


Q ss_pred             EEE-CCCe--EEEEECCCCeEEEEEeCCCCcEEEEEE--cCC-EEEEEeCCCe--EEEEECCCC--ceEeeCCccEEEEE
Q psy7057         135 SCS-NDAS--IRVWDSTTGKCVHTMYGHPNFIYSVAA--HGD-LITSGGEDQC--VCVYQNKAQ--NSFMIPAMSVWAVA  204 (557)
Q Consensus       135 s~s-~Dg~--I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~-~l~s~s~Dg~--I~iwd~~~~--~~~~~~~~~v~~v~  204 (557)
                      ..+ .++.  +..+............ .........+  .+. .+++...++.  |.+.+....  ..+...........
T Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~  177 (269)
T d2hqsa1          99 FALSKTGSLNLYVMDLASGQIRQVTD-GRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDAD  177 (269)
T ss_dssp             EEECTTSSCEEEEEETTTCCEEECCC-CSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEEEE
T ss_pred             EeeecCCccceeecccccccceeeee-ccccccccccccccccceecccccCCceEeeeecccccceeeecccccccccc
Confidence            333 3333  3333333333333222 2222222233  444 4445555554  444454444  44444555677889


Q ss_pred             EcCCCc-EEE-EEcCCcEEEEecC
Q psy7057         205 ILPNSD-IVT-GSSDGIVRVFSAN  226 (557)
Q Consensus       205 ~~p~g~-l~s-g~~Dg~I~iwd~~  226 (557)
                      ++|+++ ++. ....+...+|...
T Consensus       178 ~spdg~~~~~~~~~~~~~~i~~~~  201 (269)
T d2hqsa1         178 VSSDGKFMVMVSSNGGQQHIAKQD  201 (269)
T ss_dssp             ECTTSSEEEEEEECSSCEEEEEEE
T ss_pred             cccccceeEEEeecCCceeeeEee
Confidence            999998 444 4445555555544

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=96.78  E-value=0.1  Score=46.96  Aligned_cols=84  Identities=11%  Similarity=0.013  Sum_probs=54.3

Q ss_pred             CCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEEEEE-CCC-----eEEEEeCCCcEEEEEeCCC--
Q psy7057          49 VNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIVTGC-ADK-----TIKLHSEEGEFLKTLTGHT--  119 (557)
Q Consensus        49 ~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~sgs-~dg-----~I~vwd~~~~~~~~l~~h~--  119 (557)
                      |+.++-.+ ++.|.+.|+.+++.. .|..+...+...+|+|+| .|+..+ .++     .|.+.+..+.....+..+.  
T Consensus        12 G~~v~f~~-~~dl~~~d~~~g~~~-~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~~~lt~~~~~   89 (281)
T d1k32a2          12 GDRIIFVC-CDDLWEHDLKSGSTR-KIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRITYFSGK   89 (281)
T ss_dssp             TTEEEEEE-TTEEEEEETTTCCEE-EEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEECCCCCEE
T ss_pred             CCEEEEEe-CCcEEEEECCCCCEE-EEecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCceEEeeecCCC
Confidence            66666554 456888899887754 566677788899999999 555432 222     3566666665555554332  


Q ss_pred             -----CCEEEEEEeCCCeEE
Q psy7057         120 -----DCVRGLAVLNDTDFV  134 (557)
Q Consensus       120 -----~~V~~l~~~~~~~lv  134 (557)
                           .......|+|+++.+
T Consensus        90 ~~~~~~~~~~~~~spdg~~l  109 (281)
T d1k32a2          90 STGRRMFTDVAGFDPDGNLI  109 (281)
T ss_dssp             EETTEECSEEEEECTTCCEE
T ss_pred             ccCccccccccccCCCCCEE
Confidence                 345677889988744

>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Nidogen
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.69  E-value=0.72  Score=41.71  Aligned_cols=181  Identities=8%  Similarity=0.001  Sum_probs=108.8

Q ss_pred             ccCcccEEEEEEcCCCc-EE-EEECCCcEEEEcCCC----------------CCCCCCCCEEEEE-ECCCeEEEEECCCC
Q psy7057           9 YGHSMDVRSLSVTPDGC-IL-SASRDKSAKLWKPND----------------LSPGAKVNTLLSA-SWDMTAKLWCLESQ   69 (557)
Q Consensus         9 ~gH~~~V~~l~~spdg~-l~-sgs~Dg~V~iWd~~~----------------~~~~~~~~~l~sg-s~Dg~i~iwd~~~~   69 (557)
                      ..+...+.+|+|.+.+. |. +-..++.|+..++..                ++.+..++.|..+ ...+.|.+.++...
T Consensus        32 ~~~~~~~~~ld~D~~~~~iywsd~~~~~I~~~~l~g~~~~~v~~~~~~~p~~iAvD~~~~~lY~~d~~~~~I~~~~~dg~  111 (263)
T d1npea_          32 HIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGT  111 (263)
T ss_dssp             EEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred             ccCCCcEEEEEEEeCCCEEEEEECCCCeEEEEEcccCCcEEEEEeccccccEEEEeccCCeEEEeccCCCEEEEEecCCc
Confidence            33445577788887654 44 445667777776654                3344335555544 34568888887765


Q ss_pred             eEEEEEcccCCcEEEEEEcCCC-EEEEEEC-CCeEEEE--eCCCcEEEEEe-CCCCCEEEEEEeCC-CeEE-EEECCCeE
Q psy7057          70 QCKLTIRQHEMAVWGVIQLANG-IIVTGCA-DKTIKLH--SEEGEFLKTLT-GHTDCVRGLAVLND-TDFV-SCSNDASI  142 (557)
Q Consensus        70 ~~~~~l~~h~~~V~~l~~~~~~-~l~sgs~-dg~I~vw--d~~~~~~~~l~-~h~~~V~~l~~~~~-~~lv-s~s~Dg~I  142 (557)
                      .....+......+..++..|.+ .+..... .+..+|+  +.+|.....+. ..-....+|++.+. ++|. +-...++|
T Consensus       112 ~~~~l~~~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~~~~~i~~~~~~~P~glaiD~~~~~lYw~d~~~~~I  191 (263)
T d1npea_         112 QRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRA  191 (263)
T ss_dssp             SCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred             eEEEEecccccCCcEEEEecccCcEEEeecCCCCcEEEEecCCCCCceeeeeecccccceEEEeecCcEEEEEeCCCCEE
Confidence            4433344444678899998855 4443332 2333444  46665444433 23356789999866 4444 55667889


Q ss_pred             EEEECCCCeEEEEEeCCCCcEEEEEEcCCEEE-EEeCCCeEEEEECCCC
Q psy7057         143 RVWDSTTGKCVHTMYGHPNFIYSVAAHGDLIT-SGGEDQCVCVYQNKAQ  190 (557)
Q Consensus       143 ~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~l~-s~s~Dg~I~iwd~~~~  190 (557)
                      ...++........+.+.. ...+|++++..|. +-...+.|...|....
T Consensus       192 ~~~~~~g~~~~~v~~~~~-~P~~lav~~~~lYwtd~~~~~I~~~~~~~g  239 (263)
T d1npea_         192 ECLNPAQPGRRKVLEGLQ-YPFAVTSYGKNLYYTDWKTNSVIAMDLAIS  239 (263)
T ss_dssp             EEEETTEEEEEEEEECCC-SEEEEEEETTEEEEEETTTTEEEEEETTTT
T ss_pred             EEEECCCCCeEEEECCCC-CcEEEEEECCEEEEEECCCCEEEEEECCCC
Confidence            999986544433444433 3468888666554 5456788888887655

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.62  E-value=0.62  Score=46.03  Aligned_cols=143  Identities=13%  Similarity=0.071  Sum_probs=85.9

Q ss_pred             cEEEEEEcCCCc-EEEE---------ECCCcEEEEcCCC------------------CCCCCCCCEEEEEECCCeEEEEE
Q psy7057          14 DVRSLSVTPDGC-ILSA---------SRDKSAKLWKPND------------------LSPGAKVNTLLSASWDMTAKLWC   65 (557)
Q Consensus        14 ~V~~l~~spdg~-l~sg---------s~Dg~V~iWd~~~------------------~~~~~~~~~l~sgs~Dg~i~iwd   65 (557)
                      .+....||||++ ++..         +..+.+.++|+.+                  ..++|+++.|+-.. ++.|.+.+
T Consensus        62 ~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~~~~~l~~~~~~~~~l~~~~wSPDG~~iafv~-~~nl~~~~  140 (465)
T d1xfda1          62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIF-ENNIYYCA  140 (465)
T ss_dssp             TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEE-TTEEEEES
T ss_pred             ccceeEECCCCCeEEEEEcccceeEeeccccEEEEEccCCceeeccCccCCccccceeeeccCCceEEEEe-cceEEEEe
Confidence            566788999998 5544         3457788888765                  46788999887765 66788888


Q ss_pred             CCCCeEEEEEc-ccCCcE-----------------EEEEEcCCC-EEEEEECC-CeEEEE--------------------
Q psy7057          66 LESQQCKLTIR-QHEMAV-----------------WGVIQLANG-IIVTGCAD-KTIKLH--------------------  105 (557)
Q Consensus        66 ~~~~~~~~~l~-~h~~~V-----------------~~l~~~~~~-~l~sgs~d-g~I~vw--------------------  105 (557)
                      ..++..++... +....|                 .++.|+|+| .|+....| ..+..+                    
T Consensus       141 ~~~~~~~~lt~~g~~~~i~nG~~d~vyeee~~~~~~a~~WSPDgk~iaf~~~D~s~V~~~~~~~~~~~~~p~~~~~~Yp~  220 (465)
T d1xfda1         141 HVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPK  220 (465)
T ss_dssp             SSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCB
T ss_pred             cCCCceEEEecccCcceeeccccchhhhhhhccccceEEECCCCCeEEEEEecccccceeecccccccccceeeeeeccc
Confidence            77765444332 222222                 467799999 66655432 223222                    


Q ss_pred             -------------eCCCcEEEEE-------eCCCCCEEEEEEeCCCeEEE--EECC---CeEEEEECCCCeEEEEEe
Q psy7057         106 -------------SEEGEFLKTL-------TGHTDCVRGLAVLNDTDFVS--CSND---ASIRVWDSTTGKCVHTMY  157 (557)
Q Consensus       106 -------------d~~~~~~~~l-------~~h~~~V~~l~~~~~~~lvs--~s~D---g~I~vwd~~~~~~~~~~~  157 (557)
                                   |.++......       .....-+..+.|+++++++.  ...+   ..|.++|..++++...+.
T Consensus       221 ~G~~np~~~l~v~d~~~~~~~~~~~~~~~~~~~~~y~~~~~W~~d~~~~~~~~nR~q~~~~i~~~d~~tg~~~~~~~  297 (465)
T d1xfda1         221 AGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHE  297 (465)
T ss_dssp             TTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEE
T ss_pred             cCCCCCceeEEEEecCCCcEEEEEeccCcCccccceeeeeEEcCCCeEEEEEEccccccceEEEEcCCCCcEEEEEE
Confidence                         2111110000       00112367788999988553  3333   257889999998765554

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=95.41  E-value=0.76  Score=40.79  Aligned_cols=23  Identities=17%  Similarity=0.186  Sum_probs=18.5

Q ss_pred             EEeccCcccEEEEEEcCCCc-EEE
Q psy7057           6 TALYGHSMDVRSLSVTPDGC-ILS   28 (557)
Q Consensus         6 ~~l~gH~~~V~~l~~spdg~-l~s   28 (557)
                      +.|..+.+.+...+|||||+ |+-
T Consensus        34 ~~Lt~~~~~~~~p~~SPDG~~iaf   57 (281)
T d1k32a2          34 RKIVSNLGVINNARFFPDGRKIAI   57 (281)
T ss_dssp             EEEECSSSEEEEEEECTTSSEEEE
T ss_pred             EEEecCCCcccCEEECCCCCEEEE
Confidence            45677778899999999998 663

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.06  E-value=0.067  Score=53.50  Aligned_cols=203  Identities=9%  Similarity=0.017  Sum_probs=110.6

Q ss_pred             EEEcCCCcEEEEECCCcEEEEcCCC-------------------CCCCCCCCEEEEEE---------CCCeEEEEECCCC
Q psy7057          18 LSVTPDGCILSASRDKSAKLWKPND-------------------LSPGAKVNTLLSAS---------WDMTAKLWCLESQ   69 (557)
Q Consensus        18 l~~spdg~l~sgs~Dg~V~iWd~~~-------------------~~~~~~~~~l~sgs---------~Dg~i~iwd~~~~   69 (557)
                      ..|.+++.++.-..+|.|.+||+.+                   ..++|++++++...         ..+.+.++|+.++
T Consensus        22 ~~W~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~  101 (465)
T d1xfda1          22 AKWISDTEFIYREQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHG  101 (465)
T ss_dssp             CCBSSSSCBCCCCSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSC
T ss_pred             CEEeCCCcEEEEeCCCcEEEEECCCCCEEEEEcCccccccccceeEECCCCCeEEEEEcccceeEeeccccEEEEEccCC
Confidence            3577887766556788899998765                   34678888887764         3567889999887


Q ss_pred             eEEEEE--cccCCcEEEEEEcCCC-EEEEEECCCeEEEEeCCC-cEEEEEe-CCCCC-----------------EEEEEE
Q psy7057          70 QCKLTI--RQHEMAVWGVIQLANG-IIVTGCADKTIKLHSEEG-EFLKTLT-GHTDC-----------------VRGLAV  127 (557)
Q Consensus        70 ~~~~~l--~~h~~~V~~l~~~~~~-~l~sgs~dg~I~vwd~~~-~~~~~l~-~h~~~-----------------V~~l~~  127 (557)
                      ......  ......+....|+|+| .|+-. .++.|.+.+..+ ..++... +....                 -.++.|
T Consensus       102 ~~~~l~~~~~~~~~l~~~~wSPDG~~iafv-~~~nl~~~~~~~~~~~~lt~~g~~~~i~nG~~d~vyeee~~~~~~a~~W  180 (465)
T d1xfda1         102 DPQSLDPPEVSNAKLQYAGWGPKGQQLIFI-FENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWW  180 (465)
T ss_dssp             CCEECCCTTCCSCCCSBCCBCSSTTCEEEE-ETTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEE
T ss_pred             ceeeccCccCCccccceeeeccCCceEEEE-ecceEEEEecCCCceEEEecccCcceeeccccchhhhhhhccccceEEE
Confidence            643322  2223455567899999 55544 467788877433 3332222 21111                 257789


Q ss_pred             eCCCe-EEEEE-CCCeEEEEECCCCeEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCeEEEEECCCC--ceE-------e
Q psy7057         128 LNDTD-FVSCS-NDASIRVWDSTTGKCVHTMYGHPNFIYSVAA--HGDLITSGGEDQCVCVYQNKAQ--NSF-------M  194 (557)
Q Consensus       128 ~~~~~-lvs~s-~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~--~~~~l~s~s~Dg~I~iwd~~~~--~~~-------~  194 (557)
                      +|+|+ |+... .+..+..+.+....     ......+..+.+  -|..    .....+.++|+...  ...       .
T Consensus       181 SPDgk~iaf~~~D~s~V~~~~~~~~~-----~~~~p~~~~~~Yp~~G~~----np~~~l~v~d~~~~~~~~~~~~~~~~~  251 (465)
T d1xfda1         181 SPDGTRLAYAAINDSRVPIMELPTYT-----GSIYPTVKPYHYPKAGSE----NPSISLHVIGLNGPTHDLEMMPPDDPR  251 (465)
T ss_dssp             CTTSSEEEEEEEECTTSCEEEECCCS-----SSSSCCCEEEECCBTTSC----CCEEEEEEEESSSSCCCEECCCCCCGG
T ss_pred             CCCCCeEEEEEecccccceeeccccc-----ccccceeeeeeccccCCC----CCceeEEEEecCCCcEEEEEeccCcCc
Confidence            99987 55433 33444444332100     001112222332  1110    00124566665433  111       1


Q ss_pred             eCCccEEEEEEcCCCcEEEE--EcC---CcEEEEecCCCCc
Q psy7057         195 IPAMSVWAVAILPNSDIVTG--SSD---GIVRVFSANPDRQ  230 (557)
Q Consensus       195 ~~~~~v~~v~~~p~g~l~sg--~~D---g~I~iwd~~~~~~  230 (557)
                      .....+..+.|+|+++++..  ..+   ..|.++|..++..
T Consensus       252 ~~~~y~~~~~W~~d~~~~~~~~nR~q~~~~i~~~d~~tg~~  292 (465)
T d1xfda1         252 MREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVC  292 (465)
T ss_dssp             GSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCE
T ss_pred             cccceeeeeEEcCCCeEEEEEEccccccceEEEEcCCCCcE
Confidence            12234788999999984332  222   2467777776654

>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Nidogen
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.09  E-value=1.9  Score=38.63  Aligned_cols=181  Identities=10%  Similarity=-0.020  Sum_probs=106.2

Q ss_pred             CCCEEEEEE-CCCeEEEEECCCCeEEEEEcccCCcEEEEEEcC-CC-EEEEEECCCeEEEEeCCCcEEEEEeC-CCCCEE
Q psy7057          48 KVNTLLSAS-WDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLA-NG-IIVTGCADKTIKLHSEEGEFLKTLTG-HTDCVR  123 (557)
Q Consensus        48 ~~~~l~sgs-~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~-~~-~l~sgs~dg~I~vwd~~~~~~~~l~~-h~~~V~  123 (557)
                      ..+.|.... .++.|+..++........+......+.++++.. .+ +.++-...+.|.+.++++.....+.. .-..+.
T Consensus        46 ~~~~iywsd~~~~~I~~~~l~g~~~~~v~~~~~~~p~~iAvD~~~~~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~p~  125 (263)
T d1npea_          46 VDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPR  125 (263)
T ss_dssp             TTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEE
T ss_pred             CCCEEEEEECCCCeEEEEEcccCCcEEEEEeccccccEEEEeccCCeEEEeccCCCEEEEEecCCceEEEEecccccCCc
Confidence            355555543 457788888776555444544445788888875 34 45565667889999977765544443 346789


Q ss_pred             EEEEeCC-CeEE-EEECCCe--EEEEECCCCeEEEEEeCCCCcEEEEEEc--CCEE-EEEeCCCeEEEEECCCC--ceEe
Q psy7057         124 GLAVLND-TDFV-SCSNDAS--IRVWDSTTGKCVHTMYGHPNFIYSVAAH--GDLI-TSGGEDQCVCVYQNKAQ--NSFM  194 (557)
Q Consensus       124 ~l~~~~~-~~lv-s~s~Dg~--I~vwd~~~~~~~~~~~~h~~~V~~l~~~--~~~l-~s~s~Dg~I~iwd~~~~--~~~~  194 (557)
                      .+++.|. +.+. +-...+.  |.--++............-....+|+++  ++.| ++-...+.|...++...  +.+.
T Consensus       126 ~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~~~~~i~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~~g~~~~~v~  205 (263)
T d1npea_         126 GIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVL  205 (263)
T ss_dssp             EEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEE
T ss_pred             EEEEecccCcEEEeecCCCCcEEEEecCCCCCceeeeeecccccceEEEeecCcEEEEEeCCCCEEEEEECCCCCeEEEE
Confidence            9999987 4443 4322233  4444554333222222233456788874  4455 45456788988887654  2232


Q ss_pred             eCCccEEEEEEcCCCcE-EEEEcCCcEEEEecCCCC
Q psy7057         195 IPAMSVWAVAILPNSDI-VTGSSDGIVRVFSANPDR  229 (557)
Q Consensus       195 ~~~~~v~~v~~~p~g~l-~sg~~Dg~I~iwd~~~~~  229 (557)
                      .......++++. ++.| .+-...+.|...+..+++
T Consensus       206 ~~~~~P~~lav~-~~~lYwtd~~~~~I~~~~~~~g~  240 (263)
T d1npea_         206 EGLQYPFAVTSY-GKNLYYTDWKTNSVIAMDLAISK  240 (263)
T ss_dssp             ECCCSEEEEEEE-TTEEEEEETTTTEEEEEETTTTE
T ss_pred             CCCCCcEEEEEE-CCEEEEEECCCCEEEEEECCCCc
Confidence            222334577776 4444 454466777777776554

>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Low density lipoprotein (LDL) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.06  E-value=3.9  Score=36.50  Aligned_cols=180  Identities=13%  Similarity=0.010  Sum_probs=109.5

Q ss_pred             CcccEEEEEEcCCCc-EE-EEECCCcEEEEcCCC--------------------CCCCCCCCEEEEE-ECCCeEEEEECC
Q psy7057          11 HSMDVRSLSVTPDGC-IL-SASRDKSAKLWKPND--------------------LSPGAKVNTLLSA-SWDMTAKLWCLE   67 (557)
Q Consensus        11 H~~~V~~l~~spdg~-l~-sgs~Dg~V~iWd~~~--------------------~~~~~~~~~l~sg-s~Dg~i~iwd~~   67 (557)
                      ....+.+|+|.+.+. |. +=...+.|+.-++..                    ++.+..+..|..+ ...++|.+.++.
T Consensus        28 ~~~~~~~id~d~~~~~lYw~D~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~p~glAvD~~~~~lY~~d~~~~~I~v~~~~  107 (266)
T d1ijqa1          28 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK  107 (266)
T ss_dssp             SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred             CCCceEEEEEEeCCCEEEEEECCCCEEEEEEecCCCCCcceEEEEeCCCCCcceEEEeeccceEEEEecCCCEEEeEecC
Confidence            445667888887654 44 434555565554432                    3444444445444 455788999987


Q ss_pred             CCeEEEEEcccCCcEEEEEEcC-CCEEEEEEC--CCeEEEEeCCCcEEEEEeC-CCCCEEEEEEeCC-CeEE-EEECCCe
Q psy7057          68 SQQCKLTIRQHEMAVWGVIQLA-NGIIVTGCA--DKTIKLHSEEGEFLKTLTG-HTDCVRGLAVLND-TDFV-SCSNDAS  141 (557)
Q Consensus        68 ~~~~~~~l~~h~~~V~~l~~~~-~~~l~sgs~--dg~I~vwd~~~~~~~~l~~-h~~~V~~l~~~~~-~~lv-s~s~Dg~  141 (557)
                      .......+.........++..| .|.+.....  .+.|...+++|.....+.. .-....+|++.+. ++|. +-+..+.
T Consensus       108 g~~~~~~~~~~~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~dGs~~~~l~~~~~~~p~gl~iD~~~~~lYw~d~~~~~  187 (266)
T d1ijqa1         108 GVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS  187 (266)
T ss_dssp             SSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred             CceEEEEEcCCCCCcceEEEEcccCeEEEeccCCCcceeEeccCCCceecccccccceeeEEEeeccccEEEEecCCcCE
Confidence            7665555555566788999988 454444433  3456656677776665543 3356789999876 4444 5566788


Q ss_pred             EEEEECCCCeEEEEEeC--CCCcEEEEEEcCCEEE-EEeCCCeEEEEECCCC
Q psy7057         142 IRVWDSTTGKCVHTMYG--HPNFIYSVAAHGDLIT-SGGEDQCVCVYQNKAQ  190 (557)
Q Consensus       142 I~vwd~~~~~~~~~~~~--h~~~V~~l~~~~~~l~-s~s~Dg~I~iwd~~~~  190 (557)
                      |...++...........  ......+|++.++.|. +-..++.|...+..+.
T Consensus       188 I~~~~~dG~~~~~~~~~~~~~~~p~~lav~~~~ly~td~~~~~I~~~~~~~g  239 (266)
T d1ijqa1         188 ISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTG  239 (266)
T ss_dssp             EEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred             EEEEECCCCCEEEEEeCCCcccccEEEEEECCEEEEEECCCCeEEEEECCCC
Confidence            99999865443333332  2345678888666554 4456778877774443

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=90.21  E-value=3.7  Score=38.15  Aligned_cols=139  Identities=14%  Similarity=0.124  Sum_probs=74.5

Q ss_pred             cEEEEEEcCCCc-EEEEECC-----C------cEEEEcCCC-------------------CCCCCCCCEEEEEECC-CeE
Q psy7057          14 DVRSLSVTPDGC-ILSASRD-----K------SAKLWKPND-------------------LSPGAKVNTLLSASWD-MTA   61 (557)
Q Consensus        14 ~V~~l~~spdg~-l~sgs~D-----g------~V~iWd~~~-------------------~~~~~~~~~l~sgs~D-g~i   61 (557)
                      .+...+...+|+ ++.|+.+     +      .+.+||+.+                   ..+..++..++.|+.+ .++
T Consensus        21 ~~~~a~~~~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~i~v~Gg~~~~~~  100 (387)
T d1k3ia3          21 PAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKT  100 (387)
T ss_dssp             CSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCE
T ss_pred             ccEEEEEeeCCEEEEEEeecCcccCCCCCceeEEEEEECCCCcEeecCCCCCCcccceeEEEEecCCcEEEeecCCCcce
Confidence            344455566888 5566642     1      377899876                   1123467777877655 589


Q ss_pred             EEEECCCCeEEEEEcc-cCCcEEEEEEcCCC-EEEEEECC------CeEEEEeCCCcEEEEEeC----------CC----
Q psy7057          62 KLWCLESQQCKLTIRQ-HEMAVWGVIQLANG-IIVTGCAD------KTIKLHSEEGEFLKTLTG----------HT----  119 (557)
Q Consensus        62 ~iwd~~~~~~~~~l~~-h~~~V~~l~~~~~~-~l~sgs~d------g~I~vwd~~~~~~~~l~~----------h~----  119 (557)
                      .+||..+..-...-.. ....-.+++..+++ .++.|+.+      ..+.+||.....-..+..          +.    
T Consensus       101 ~~yd~~~~~w~~~~~~~~~r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~  180 (387)
T d1k3ia3         101 SLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYR  180 (387)
T ss_dssp             EEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGT
T ss_pred             eEecCccCcccccccccccccccceeeecCCceeeeccccccccccceeeeecCCCCceeecCCCcccccccccccceee
Confidence            9999887654321111 11112345666777 66666542      358888855443332211          00    


Q ss_pred             -CCEEEEEEeCCCe-EEEEECCCeEEEEECCCCeE
Q psy7057         120 -DCVRGLAVLNDTD-FVSCSNDASIRVWDSTTGKC  152 (557)
Q Consensus       120 -~~V~~l~~~~~~~-lvs~s~Dg~I~vwd~~~~~~  152 (557)
                       ..-..+...++++ ++.+..+..+.+++..+...
T Consensus       181 ~~~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~  215 (387)
T d1k3ia3         181 SDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDV  215 (387)
T ss_dssp             TTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEE
T ss_pred             ccceeEEEEeCCCCEEEecCcCCcEEecCcccCcE
Confidence             0001112223444 44566666777777666543

>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Clathrin heavy-chain terminal domain
family: Clathrin heavy-chain terminal domain
domain: Clathrin heavy-chain terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=89.17  E-value=7.9  Score=35.21  Aligned_cols=230  Identities=11%  Similarity=0.083  Sum_probs=140.2

Q ss_pred             CCcEEEEcCCC-------------CCCCCCCCEEEEEECCCeEEEEECCCCeEEEEEcccCCcEEEEEEcCCCEEEEEEC
Q psy7057          32 DKSAKLWKPND-------------LSPGAKVNTLLSASWDMTAKLWCLESQQCKLTIRQHEMAVWGVIQLANGIIVTGCA   98 (557)
Q Consensus        32 Dg~V~iWd~~~-------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~~l~sgs~   98 (557)
                      ...|.|-|+.+             .-.+|..+.|+.-+ ..++.++|+++.+.+..+.-.+ .|.--.|..+..|+..+ 
T Consensus        44 ~~~VvIidl~n~~~~~Rrpi~AdsAIMhP~~~IiALra-g~~LQiFnletK~klks~~~~e-~VvfWkWis~~~L~lVT-  120 (327)
T d1utca2          44 QAQVVIIDMNDPSNPIRRPISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISLNTVALVT-  120 (327)
T ss_dssp             EEEEEEEETTSTTSCEEEECCCSEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSS-CCCEEEESSSSEEEEEC-
T ss_pred             CceEEEEECCCCCcceecccchhhhhcCCCCcEEEEec-CCeEEEEehhHhhhhceEEcCC-CcEEEEecCCCEEEEEc-
Confidence            34677777765             11235566666655 6689999999998888877444 56667788777544443 


Q ss_pred             CCeEEEEeCCC--cEEEEEeCCC----CCEEEEEEeCCCe-EE-E--EEC----CCeEEEEECCCCeEEEEEeCCCCcEE
Q psy7057          99 DKTIKLHSEEG--EFLKTLTGHT----DCVRGLAVLNDTD-FV-S--CSN----DASIRVWDSTTGKCVHTMYGHPNFIY  164 (557)
Q Consensus        99 dg~I~vwd~~~--~~~~~l~~h~----~~V~~l~~~~~~~-lv-s--~s~----Dg~I~vwd~~~~~~~~~~~~h~~~V~  164 (557)
                      +..|.-|+.++  .+.+.+..|.    ..|-.-..+++.+ ++ +  +..    .|.+.+|... .+..+.+.+|.+...
T Consensus       121 ~taVYHW~~~g~s~P~k~fdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~e-r~~sQ~ieGhaa~F~  199 (327)
T d1utca2         121 DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVD-RKVSQPIEGHAASFA  199 (327)
T ss_dssp             SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETT-TTEEEEECCSEEEEE
T ss_pred             CCceEEEcccCCCCchhhhhhcccccCceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEec-cCcCccccceeeeeE
Confidence            46789999644  5677776664    3455566666665 22 2  222    2678899964 556677888877666


Q ss_pred             EEEEcCC----EEEEEe----CCCeEEEEECCCC----ce-----Ee--e----CCccEEEEEEcCCCc-EEEEEcCCcE
Q psy7057         165 SVAAHGD----LITSGG----EDQCVCVYQNKAQ----NS-----FM--I----PAMSVWAVAILPNSD-IVTGSSDGIV  220 (557)
Q Consensus       165 ~l~~~~~----~l~s~s----~Dg~I~iwd~~~~----~~-----~~--~----~~~~v~~v~~~p~g~-l~sg~~Dg~I  220 (557)
                      .+..+|+    .|++-.    ..+.+++-++...    ..     ..  .    ..+...++.+++... +..-+.-|.|
T Consensus       200 ~~~~~g~~~~~~lf~fa~r~~~~~kLhIiEig~~~~g~~~f~kk~vdi~fppea~~DFPvamqvs~kygiiyviTK~G~i  279 (327)
T d1utca2         200 QFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYI  279 (327)
T ss_dssp             EECCTTCSSCEEEEEEEEEETTEEEEEEEECSCCCTTCCCCCCEEEECCCCTTCTTCCEEEEEEETTTTEEEEEETTSEE
T ss_pred             EEEcCCCCCCceEEEEEECCCCCcEEEEEEcCCCccCCCCCcceeEEEECCccccCCcEEEEEeeccCCEEEEEecCcEE
Confidence            6665332    222221    2367888885432    11     11  1    134566777877665 7788899999


Q ss_pred             EEEecCCCCcchhHHHhcccceeEEEeccCCCceeEEEEeCCCcEEEE
Q psy7057         221 RVFSANPDRQAEDAVQAQYAEEVKKLKSANEQEIGGVKVSDDGIVRVF  268 (557)
Q Consensus       221 ~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~vs~s~DG~IrvW  268 (557)
                      +++|+.++........   ......+........++++...+|.|.--
T Consensus       280 ~lyDleTgt~i~~nRI---s~~~iF~~a~~~~~~Gi~~VNr~GqVl~v  324 (327)
T d1utca2         280 HLYDLETGTCIYMNRI---SGETIFVTAPHEATAGIIGVNRKGQVLSV  324 (327)
T ss_dssp             EEEETTTCCEEEEEEC---CSSCEEEEEEETTTTEEEEEETTSEEEEE
T ss_pred             EEEEcccccEEEEeec---CCCceEEeccCCCCceEEEECCCCeEEEE
Confidence            9999998876522211   11122233333344456677777766543

>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylobacterium extorquens [TaxId: 408]

Probab=88.90  E-value=5.4  Score=40.25  Aligned_cols=141  Identities=12%  Similarity=0.073  Sum_probs=86.1

Q ss_pred             CEEEEEECCCeEEEEECCCCeEEEEEcccC----CcEEEEEEcCCCEEEEEEC------CCeEEEEe-CCCcEEEEEeCC
Q psy7057          50 NTLLSASWDMTAKLWCLESQQCKLTIRQHE----MAVWGVIQLANGIIVTGCA------DKTIKLHS-EEGEFLKTLTGH  118 (557)
Q Consensus        50 ~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~----~~V~~l~~~~~~~l~sgs~------dg~I~vwd-~~~~~~~~l~~h  118 (557)
                      .+++.++.|+.|.-.|.++|+.+..+....    ..+++--..-++.++.|+.      .|.|+-+| .+|+.+.++...
T Consensus       122 ~~v~~~t~dg~l~Alda~tG~~~w~~~~~d~~~~~~~t~~P~v~~~~vivg~~~~e~~~~G~v~A~Da~TG~~~W~~~t~  201 (596)
T d1w6sa_         122 ALILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYAT  201 (596)
T ss_dssp             CEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESS
T ss_pred             eEEEEEeCCCCeEeeccccCceeccccccccccccccccCCcEECCeEEEeeccccccccCceEEEECCCCcEEEEeecc
Confidence            468899999999999999999888774321    1111110111556666654      48899999 788888765421


Q ss_pred             C-------------------------------------CCEE-EEEEeCC-CeEEEEEC----------------CCeEE
Q psy7057         119 T-------------------------------------DCVR-GLAVLND-TDFVSCSN----------------DASIR  143 (557)
Q Consensus       119 ~-------------------------------------~~V~-~l~~~~~-~~lvs~s~----------------Dg~I~  143 (557)
                      .                                     ..++ .+++.+. +.+..+..                ...|.
T Consensus       202 ~~~~~~~~~~~~~~~~~~~g~~~~~~~tw~g~~~~~gg~~~W~~~s~D~~~~lvy~~tg~~~p~~~~~r~g~n~ys~siv  281 (596)
T d1w6sa_         202 GPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIF  281 (596)
T ss_dssp             SCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEE
T ss_pred             CCccccccccccccccccccccccccccCCCCceecCCCccccccccccCCCeeeccccccccccccccccccccccccc
Confidence            1                                     1111 2344554 33333221                34577


Q ss_pred             EEECCCCeEEEEEeC--CC-------CcEEEEE---EcCC---EEEEEeCCCeEEEEECCCC
Q psy7057         144 VWDSTTGKCVHTMYG--HP-------NFIYSVA---AHGD---LITSGGEDQCVCVYQNKAQ  190 (557)
Q Consensus       144 vwd~~~~~~~~~~~~--h~-------~~V~~l~---~~~~---~l~s~s~Dg~I~iwd~~~~  190 (557)
                      -.|+++|+.+-.++.  |.       .....+.   .+++   .++....+|.+.++|..+.
T Consensus       282 AlD~~TG~~~W~~Q~~~~D~Wd~d~~~~~~l~d~~~~~G~~~~~v~~~~k~G~~~vlDr~tG  343 (596)
T d1w6sa_         282 GRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDG  343 (596)
T ss_dssp             EEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTC
T ss_pred             ccccccccccccccceeccccCCccccceeeeeccccccccccceeccccccceeeecCCCC
Confidence            889999999887763  21       1111122   1443   5778889999999996655

>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=88.89  E-value=12  Score=37.12  Aligned_cols=54  Identities=24%  Similarity=0.252  Sum_probs=35.8

Q ss_pred             CeEEEEECCCCeEEEEEeCCCCcEE-EEEEcCCEEEEEeCCCeEEEEECCCCceE
Q psy7057         140 ASIRVWDSTTGKCVHTMYGHPNFIY-SVAAHGDLITSGGEDQCVCVYQNKAQNSF  193 (557)
Q Consensus       140 g~I~vwd~~~~~~~~~~~~h~~~V~-~l~~~~~~l~s~s~Dg~I~iwd~~~~~~~  193 (557)
                      |.|.-+|+.+++.+-+...-..... .|+..+.++++++.|+.++.+|.++.+.+
T Consensus       444 G~l~AiD~~TG~~~W~~~~~~~~~~g~l~TagglVf~G~~dg~l~A~Da~tGe~l  498 (571)
T d2ad6a1         444 GQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKEL  498 (571)
T ss_dssp             EEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred             ccEEEeccCCCceeeEcCCCCCCCcceeEecCCEEEEECCCCeEEEEECCCCcEE
Confidence            4677788888887766542211111 23346777888999999999998877544

>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: Serum paraoxonase/arylesterase 1, PON1
domain: Serum paraoxonase/arylesterase 1, PON1
species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=87.87  E-value=3.8  Score=38.18  Aligned_cols=92  Identities=9%  Similarity=0.095  Sum_probs=55.5

Q ss_pred             CCCeEEEEECCCC--eE--EEEEeC-CCCcEEEEEE--cCCEEEEEe-----------------CCCeEEEEECCCCceE
Q psy7057         138 NDASIRVWDSTTG--KC--VHTMYG-HPNFIYSVAA--HGDLITSGG-----------------EDQCVCVYQNKAQNSF  193 (557)
Q Consensus       138 ~Dg~I~vwd~~~~--~~--~~~~~~-h~~~V~~l~~--~~~~l~s~s-----------------~Dg~I~iwd~~~~~~~  193 (557)
                      ...+|-+|++...  +.  +.++.. ......+++.  ++.+++|-.                 .-+.+..|+.+..+.+
T Consensus       122 ~~~~ieif~~~~~~~~l~~~~~v~~~~~~~pNDv~~~~~g~fy~Tnd~~~~~~~~~~~e~~~~~~~g~v~~~~~~~~~~~  201 (340)
T d1v04a_         122 SSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDVRVV  201 (340)
T ss_dssp             TCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCCSHHHHHHHHHTTCCCEEEEEECSSCEEEE
T ss_pred             CCceeEEEEEeCCCCeEEEEeecCCccccCccceEEecCCCEEEecCccCcChhhhhhhHhhcCCceeEEEEcCCceEEE
Confidence            3567888876432  22  222222 1235677777  555666631                 1234555665555444


Q ss_pred             eeCCccEEEEEEcCCCc--EEEEEcCCcEEEEecCCCC
Q psy7057         194 MIPAMSVWAVAILPNSD--IVTGSSDGIVRVFSANPDR  229 (557)
Q Consensus       194 ~~~~~~v~~v~~~p~g~--l~sg~~Dg~I~iwd~~~~~  229 (557)
                      ...-...+.++++|+++  +++-+..+.|++|++....
T Consensus       202 ~~~l~~pNGI~~s~d~~~lyVa~t~~~~i~~y~~~~~~  239 (340)
T d1v04a_         202 AEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANW  239 (340)
T ss_dssp             EEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTS
T ss_pred             cCCCCccceeEECCCCCEEEEEeCCCCeEEEEEeCCCc
Confidence            44445789999999998  5566678899999987544

>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Pseudomonas putida, hk5 [TaxId: 303]

Probab=87.02  E-value=12  Score=37.21  Aligned_cols=54  Identities=13%  Similarity=0.288  Sum_probs=39.2

Q ss_pred             CeEEEEECCCCeEEEEEeCCCCcE-EEEEEcCCEEEEEeCCCeEEEEECCCCceE
Q psy7057         140 ASIRVWDSTTGKCVHTMYGHPNFI-YSVAAHGDLITSGGEDQCVCVYQNKAQNSF  193 (557)
Q Consensus       140 g~I~vwd~~~~~~~~~~~~h~~~V-~~l~~~~~~l~s~s~Dg~I~iwd~~~~~~~  193 (557)
                      |.|.-||+.+++.+-+........ -.|+..+.++++++.||.++.+|..+.+.+
T Consensus       438 G~l~A~D~~tGk~~W~~~~~~~~~gg~l~TagglVF~G~~dg~l~A~Da~tGe~L  492 (560)
T d1kv9a2         438 GALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEAL  492 (560)
T ss_dssp             EEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred             cceEEEeCCCCeEeeeccCCCCCCCceeEECCCEEEEECCCCcEEEEECCCCcEe
Confidence            568889999999887765221111 134447788889999999999998887554

>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Low density lipoprotein (LDL) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.73  E-value=11  Score=33.22  Aligned_cols=170  Identities=11%  Similarity=0.007  Sum_probs=101.4

Q ss_pred             CeEEEEECCCCeEEEEEcccCCcEEEEEEcCCC-EEE-EEECCCeEEEEeCCCc-----EEEEEeCCCCCEEEEEEeCC-
Q psy7057          59 MTAKLWCLESQQCKLTIRQHEMAVWGVIQLANG-IIV-TGCADKTIKLHSEEGE-----FLKTLTGHTDCVRGLAVLND-  130 (557)
Q Consensus        59 g~i~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~-~l~-sgs~dg~I~vwd~~~~-----~~~~l~~h~~~V~~l~~~~~-  130 (557)
                      ..|+..++.+.+....+. ....+.++.|.+.+ .|. +-...+.|...++.+.     ....+......+.+|++... 
T Consensus        10 ~~I~~~~l~~~~~~~~~~-~~~~~~~id~d~~~~~lYw~D~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~p~glAvD~~~   88 (266)
T d1ijqa1          10 HEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIH   88 (266)
T ss_dssp             SSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTT
T ss_pred             CeEEEEECCCCcceeeeC-CCCceEEEEEEeCCCEEEEEECCCCEEEEEEecCCCCCcceEEEEeCCCCCcceEEEeecc
Confidence            358888887765443333 45567789998754 444 4345566766554331     12222333355777888754 


Q ss_pred             Ce-EEEEECCCeEEEEECCCCeEEEEEeCCCCcEEEEEEcC--CEEE-EE-eCCCeEEEEECCCC--ceEee-CCccEEE
Q psy7057         131 TD-FVSCSNDASIRVWDSTTGKCVHTMYGHPNFIYSVAAHG--DLIT-SG-GEDQCVCVYQNKAQ--NSFMI-PAMSVWA  202 (557)
Q Consensus       131 ~~-lvs~s~Dg~I~vwd~~~~~~~~~~~~h~~~V~~l~~~~--~~l~-s~-s~Dg~I~iwd~~~~--~~~~~-~~~~v~~  202 (557)
                      +. +++-...+.|.+.++........+.........++.++  .+|. +- +..+.|...++...  ..+.. .-.....
T Consensus        89 ~~lY~~d~~~~~I~v~~~~g~~~~~~~~~~~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~dGs~~~~l~~~~~~~p~g  168 (266)
T d1ijqa1          89 SNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNG  168 (266)
T ss_dssp             TEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEE
T ss_pred             ceEEEEecCCCEEEeEecCCceEEEEEcCCCCCcceEEEEcccCeEEEeccCCCcceeEeccCCCceecccccccceeeE
Confidence            33 45667778999999876665555555556778888843  3443 33 23445666665433  33322 2245788


Q ss_pred             EEEcCCCc-EE-EEEcCCcEEEEecCCCC
Q psy7057         203 VAILPNSD-IV-TGSSDGIVRVFSANPDR  229 (557)
Q Consensus       203 v~~~p~g~-l~-sg~~Dg~I~iwd~~~~~  229 (557)
                      +++.+.+. |. +-...+.|...+++...
T Consensus       169 l~iD~~~~~lYw~d~~~~~I~~~~~dG~~  197 (266)
T d1ijqa1         169 ITLDLLSGRLYWVDSKLHSISSIDVNGGN  197 (266)
T ss_dssp             EEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred             EEeeccccEEEEecCCcCEEEEEECCCCC
Confidence            99998766 44 44567888888887543

>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Comamonas testosteroni [TaxId: 285]

Probab=85.39  E-value=9.2  Score=38.13  Aligned_cols=27  Identities=7%  Similarity=-0.140  Sum_probs=21.5

Q ss_pred             CEEEEEECCCeEEEEECCCCeEEEEEc
Q psy7057          50 NTLLSASWDMTAKLWCLESQQCKLTIR   76 (557)
Q Consensus        50 ~~l~sgs~Dg~i~iwd~~~~~~~~~l~   76 (557)
                      ..++.++.+|.+.++|..+++.+....
T Consensus       328 ~~v~~~~k~G~l~~lDr~tGe~~~~~~  354 (573)
T d1kb0a2         328 KVILHAPKNGFFFVLDRTNGKFISAKN  354 (573)
T ss_dssp             EEEEECCTTSEEEEEETTTCCEEEEEE
T ss_pred             eeeeeccccceeEEecccccccccccc
Confidence            356778889999999999998876543

>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Pseudomonas putida, hk5 [TaxId: 303]

Probab=85.21  E-value=8  Score=38.50  Aligned_cols=78  Identities=5%  Similarity=0.009  Sum_probs=44.4

Q ss_pred             CeEEEEe-CCCcEEEEEeCCCCCEEEEEEeCCCeEEEEECCCeEEEEECCCCeEEEEEeCC---CCcEEEEEEcCC-EEE
Q psy7057         100 KTIKLHS-EEGEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDSTTGKCVHTMYGH---PNFIYSVAAHGD-LIT  174 (557)
Q Consensus       100 g~I~vwd-~~~~~~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~~~~~~~~~~~~h---~~~V~~l~~~~~-~l~  174 (557)
                      |.+.-|| .+++.+..................+.++.|+.|+.++-+|..+|+.+-++...   .+.......+|+ +|+
T Consensus       438 G~l~A~D~~tGk~~W~~~~~~~~~gg~l~TagglVF~G~~dg~l~A~Da~tGe~LW~~~l~~~~~~~P~ty~~dGkqyv~  517 (560)
T d1kv9a2         438 GALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGRQYVA  517 (560)
T ss_dssp             EEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred             cceEEEeCCCCeEeeeccCCCCCCCceeEECCCEEEEECCCCcEEEEECCCCcEeEEEECCCCccccCEEEEECCEEEEE
Confidence            4566667 45555544331111111111223466668999999999999999999888642   222223334775 444


Q ss_pred             EEe
Q psy7057         175 SGG  177 (557)
Q Consensus       175 s~s  177 (557)
                      +.+
T Consensus       518 v~a  520 (560)
T d1kv9a2         518 IMA  520 (560)
T ss_dssp             EEE
T ss_pred             EEe
Confidence            433

>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=84.39  E-value=9.8  Score=37.92  Aligned_cols=30  Identities=13%  Similarity=0.098  Sum_probs=25.6

Q ss_pred             CCCeEEEEECCCeEEEEECCCCeEEEEEeC
Q psy7057         129 NDTDFVSCSNDASIRVWDSTTGKCVHTMYG  158 (557)
Q Consensus       129 ~~~~lvs~s~Dg~I~vwd~~~~~~~~~~~~  158 (557)
                      ..+.+++++.|+.++-+|.++|+.+-++.-
T Consensus       474 agglVf~G~~dg~l~A~Da~tGe~lW~~~l  503 (571)
T d2ad6a1         474 KGGLVWYATLDGYLKALDNKDGKELWNFKM  503 (571)
T ss_dssp             TTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred             cCCEEEEECCCCeEEEEECCCCcEEEEEEC
Confidence            456667899999999999999999988763

>d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nucleoporin domain
family: Nucleoporin domain
domain: Nucleoporin NUP159
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=84.36  E-value=17  Score=34.09  Aligned_cols=129  Identities=10%  Similarity=-0.002  Sum_probs=79.8

Q ss_pred             cEEEEEEcC-CCEEEEEECCCeEEEEe-----------CC-CcEEEEEeCCCCCEEEEEEeCCCeEEEEECCCeEEEEEC
Q psy7057          81 AVWGVIQLA-NGIIVTGCADKTIKLHS-----------EE-GEFLKTLTGHTDCVRGLAVLNDTDFVSCSNDASIRVWDS  147 (557)
Q Consensus        81 ~V~~l~~~~-~~~l~sgs~dg~I~vwd-----------~~-~~~~~~l~~h~~~V~~l~~~~~~~lvs~s~Dg~I~vwd~  147 (557)
                      ...-++.++ .|+++.|+.++. +|..           .. ........  -..|..++++.+.  ++...++.+..++.
T Consensus        38 ~~~LLAVsn~~GLl~aa~~~~l-~V~~t~~l~~~~~~~~~~~~~~~~~~--ip~v~~vafs~d~--l~v~~~~~l~~~~~  112 (381)
T d1xipa_          38 SLQNLDISNSKSLFVAASGSKA-VVGELQLLRDHITSDSTPLTFKWEKE--IPDVIFVCFHGDQ--VLVSTRNALYSLDL  112 (381)
T ss_dssp             CCBCEEEETTTTEEEEEETTEE-EEEEHHHHHHHHHSSSCCCCCSEEEE--CTTEEEEEEETTE--EEEEESSEEEEEES
T ss_pred             ccceEEEeCCCCEEEEECCCEE-EEEEHHHHHHHhhccCCCCcceeccC--CCCeEEEEeeCCE--EEEEeCCCEEEEEe
Confidence            344566666 458888887754 4543           01 11111111  2368889997553  33344567888887


Q ss_pred             CCCeEEEEEeCCCCcEEEEEEcCCEEEEEeCCCeEEEEECCCCceEee--------CCccEEEEEEcCCCc-EEEE
Q psy7057         148 TTGKCVHTMYGHPNFIYSVAAHGDLITSGGEDQCVCVYQNKAQNSFMI--------PAMSVWAVAILPNSD-IVTG  214 (557)
Q Consensus       148 ~~~~~~~~~~~h~~~V~~l~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~--------~~~~v~~v~~~p~g~-l~sg  214 (557)
                      ..-........-...+..+.+.+..++....++.+.++++........        -...+.+++|++.|. ++++
T Consensus       113 ~~l~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~v~ws~kgkq~v~~  188 (381)
T d1xipa_         113 EELSEFRTVTSFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKSTKQLAQNVTSFDVTNSQLAVLLKDRSFQSFAW  188 (381)
T ss_dssp             SSTTCEEEEEECSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEEEEESEEEEEECSSEEEEEETTSCEEEEEE
T ss_pred             eccccccccccccccccceecCCceeEEEecCCCEEEEEeccCccccccCCcceEEecCCceEEEEeCCcEEEEEe
Confidence            665444444444567888888888888899999999999776632211        124567777777776 5554

>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Clathrin heavy-chain terminal domain
family: Clathrin heavy-chain terminal domain
domain: Clathrin heavy-chain terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=83.11  E-value=16  Score=33.01  Aligned_cols=202  Identities=13%  Similarity=0.193  Sum_probs=120.2

Q ss_pred             EEcCCCcEEEEECCCcEEEEcCCC---------------CCCCCCCCEEEEEECCCeEEEEECCCC-eEEEEEcccC---
Q psy7057          19 SVTPDGCILSASRDKSAKLWKPND---------------LSPGAKVNTLLSASWDMTAKLWCLESQ-QCKLTIRQHE---   79 (557)
Q Consensus        19 ~~spdg~l~sgs~Dg~V~iWd~~~---------------~~~~~~~~~l~sgs~Dg~i~iwd~~~~-~~~~~l~~h~---   79 (557)
                      -.+|..++++--...++.++|+++               +.|- +.+.|+..+ +..|.-|+++.. .+...+..|.   
T Consensus        69 IMhP~~~IiALrag~~LQiFnletK~klks~~~~e~VvfWkWi-s~~~L~lVT-~taVYHW~~~g~s~P~k~fdR~~~L~  146 (327)
T d1utca2          69 IMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWI-SLNTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLA  146 (327)
T ss_dssp             EECSSSSEEEEEETTEEEEEETTTTEEEEEEECSSCCCEEEES-SSSEEEEEC-SSEEEEEESSSSCCCEEEEECCGGGT
T ss_pred             hcCCCCcEEEEecCCeEEEEehhHhhhhceEEcCCCcEEEEec-CCCEEEEEc-CCceEEEcccCCCCchhhhhhccccc
Confidence            346666655444467899999987               2232 233444433 567999998543 4666666553   


Q ss_pred             -CcEEEEEEcCCC--EEEEE--EC----CCeEEEEeCCCcEEEEEeCCCCCEEEEEEeCCC---eEE-E---EECCCeEE
Q psy7057          80 -MAVWGVIQLANG--IIVTG--CA----DKTIKLHSEEGEFLKTLTGHTDCVRGLAVLNDT---DFV-S---CSNDASIR  143 (557)
Q Consensus        80 -~~V~~l~~~~~~--~l~sg--s~----dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~~~---~lv-s---~s~Dg~I~  143 (557)
                       ..|..-..+++.  .+++|  ..    .|.+.+|..+.+..+.+.||......+.+..+.   .++ .   +...++++
T Consensus       147 ~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~~~kLh  226 (327)
T d1utca2         147 GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLH  226 (327)
T ss_dssp             TCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEE
T ss_pred             CceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEeccCcCccccceeeeeEEEEcCCCCCCceEEEEEECCCCCcEEE
Confidence             456666667766  33333  22    366889998888889999997766666554321   232 2   22336788


Q ss_pred             EEECCCC--------eEEEEE-eC---CCCcEEEEEEcC--CEEEEEeCCCeEEEEECCCCceE---eeCCccEEEEEEc
Q psy7057         144 VWDSTTG--------KCVHTM-YG---HPNFIYSVAAHG--DLITSGGEDQCVCVYQNKAQNSF---MIPAMSVWAVAIL  206 (557)
Q Consensus       144 vwd~~~~--------~~~~~~-~~---h~~~V~~l~~~~--~~l~s~s~Dg~I~iwd~~~~~~~---~~~~~~v~~v~~~  206 (557)
                      +.++...        +....+ ..   ..+...++..+.  ..+..-+.-|.|++||+.+...+   +.....|...+-.
T Consensus       227 IiEig~~~~g~~~f~kk~vdi~fppea~~DFPvamqvs~kygiiyviTK~G~i~lyDleTgt~i~~nRIs~~~iF~~a~~  306 (327)
T d1utca2         227 IIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPH  306 (327)
T ss_dssp             EEECSCCCTTCCCCCCEEEECCCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE
T ss_pred             EEEcCCCccCCCCCcceeEEEECCccccCCcEEEEEeeccCCEEEEEecCcEEEEEEcccccEEEEeecCCCceEEeccC
Confidence            8887542        111111 11   245556676643  46888899999999998887333   2334455544444


Q ss_pred             CCCc-EEEEEcCCcEEE
Q psy7057         207 PNSD-IVTGSSDGIVRV  222 (557)
Q Consensus       207 p~g~-l~sg~~Dg~I~i  222 (557)
                      .... +++-..+|.|..
T Consensus       307 ~~~~Gi~~VNr~GqVl~  323 (327)
T d1utca2         307 EATAGIIGVNRKGQVLS  323 (327)
T ss_dssp             TTTTEEEEEETTSEEEE
T ss_pred             CCCceEEEECCCCeEEE
Confidence            4433 666666666543

>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Ethanol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=82.03  E-value=17  Score=36.11  Aligned_cols=24  Identities=4%  Similarity=-0.215  Sum_probs=18.9

Q ss_pred             EEEEEECCCeEEEEECCCCeEEEE
Q psy7057          51 TLLSASWDMTAKLWCLESQQCKLT   74 (557)
Q Consensus        51 ~l~sgs~Dg~i~iwd~~~~~~~~~   74 (557)
                      .++..+.++.+.+.|.++++.+..
T Consensus       338 ~v~~~~k~g~~~vldr~tG~~i~~  361 (582)
T d1flga_         338 ATAHADRNGFFYVVDRSNGKLQNA  361 (582)
T ss_dssp             EEEEECTTSEEEEEETTTCCEEEE
T ss_pred             eeEeecccccEEeecccCCccccc
Confidence            566778889999999888876654

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=81.04  E-value=14  Score=33.77  Aligned_cols=130  Identities=15%  Similarity=0.184  Sum_probs=69.7

Q ss_pred             EEEEECCCCeE--EEE-EcccCCcEEEEEEcCCC-EEEEEECC-CeEEEEeCCCcEEEEEeC--CCCCEEEEEEeCCCeE
Q psy7057          61 AKLWCLESQQC--KLT-IRQHEMAVWGVIQLANG-IIVTGCAD-KTIKLHSEEGEFLKTLTG--HTDCVRGLAVLNDTDF  133 (557)
Q Consensus        61 i~iwd~~~~~~--~~~-l~~h~~~V~~l~~~~~~-~l~sgs~d-g~I~vwd~~~~~~~~l~~--h~~~V~~l~~~~~~~l  133 (557)
                      +.+||+.+++-  ... ...|.....+.++.+++ +++.|+.+ ..+.+||.....-..+..  ....-.+.+..+++++
T Consensus        54 ~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~i~v~Gg~~~~~~~~yd~~~~~w~~~~~~~~~r~~~~~~~~~dG~v  133 (387)
T d1k3ia3          54 TSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRV  133 (387)
T ss_dssp             EEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCE
T ss_pred             EEEEECCCCcEeecCCCCCCcccceeEEEEecCCcEEEeecCCCcceeEecCccCcccccccccccccccceeeecCCce
Confidence            67899987642  122 22333333456777888 55656544 579999954333222221  1112234566777774


Q ss_pred             E-EEECC------CeEEEEECCCCeEEEEEe---------CCC------CcEEEEEE-cCCEEEEEeCCCeEEEEECCCC
Q psy7057         134 V-SCSND------ASIRVWDSTTGKCVHTMY---------GHP------NFIYSVAA-HGDLITSGGEDQCVCVYQNKAQ  190 (557)
Q Consensus       134 v-s~s~D------g~I~vwd~~~~~~~~~~~---------~h~------~~V~~l~~-~~~~l~s~s~Dg~I~iwd~~~~  190 (557)
                      + .++.+      ..+.+||..+.+-...-.         .+.      .....+.. +++.++.++....+.+++....
T Consensus       134 ~v~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~  213 (387)
T d1k3ia3         134 FTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSG  213 (387)
T ss_dssp             EEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTC
T ss_pred             eeeccccccccccceeeeecCCCCceeecCCCcccccccccccceeeccceeEEEEeCCCCEEEecCcCCcEEecCcccC
Confidence            4 55432      468999988765322100         000      11112222 6677777777777777775544

>d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Thermostable phytase (3-phytase)
family: Thermostable phytase (3-phytase)
domain: Thermostable phytase (3-phytase)
species: Bacillus amyloliquefaciens [TaxId: 1390]

Probab=80.27  E-value=23  Score=32.75  Aligned_cols=178  Identities=13%  Similarity=0.194  Sum_probs=101.2

Q ss_pred             EEEEEECCCeEEEEeCCCcEEEEEeCCCCCEEEEEEeC------CCe-EEEEEC--C--CeEEEEECC-CCeEEEEEeCC
Q psy7057          92 IIVTGCADKTIKLHSEEGEFLKTLTGHTDCVRGLAVLN------DTD-FVSCSN--D--ASIRVWDST-TGKCVHTMYGH  159 (557)
Q Consensus        92 ~l~sgs~dg~I~vwd~~~~~~~~l~~h~~~V~~l~~~~------~~~-lvs~s~--D--g~I~vwd~~-~~~~~~~~~~h  159 (557)
                      +++.....+-|.+||++|+.+..+.  .+.+..+.+-.      ... ++.++.  +  .+|.+|.+. ....+..+...
T Consensus        42 lI~gTdK~~Gl~vYdL~G~~l~~~~--~Gr~NNVDvr~~~~l~~~~~di~vasnR~~~~~~l~~~~id~~~~~l~~~~~~  119 (353)
T d1h6la_          42 KLITTNKKSGLAVYSLEGKMLHSYH--TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSITDP  119 (353)
T ss_dssp             EEEEEETTSCCEEEETTCCEEEECC--SSCEEEEEEEEEEEETTEEEEEEEEEECCTTTCEEEEEEEETTTTEEEECSCS
T ss_pred             EEEEEcCcCCEEEEcCCCcEEEecc--cCCcCccccccccccCCcceEEEEEeCCcCcceeEEEEEecCccccccccccc
Confidence            6666677777999999999988875  34555555431      122 555553  2  367788764 23344444321


Q ss_pred             -------CCcEEEEEE-----cCC-EEEEEeCCCeEEEEEC---CCC-------ceEeeCCccEEEEEEcCCCc-EEEEE
Q psy7057         160 -------PNFIYSVAA-----HGD-LITSGGEDQCVCVYQN---KAQ-------NSFMIPAMSVWAVAILPNSD-IVTGS  215 (557)
Q Consensus       160 -------~~~V~~l~~-----~~~-~l~s~s~Dg~I~iwd~---~~~-------~~~~~~~~~v~~v~~~p~g~-l~sg~  215 (557)
                             ...++.+|+     ++. ++++...+|.+..|.+   +..       +.+. ....+-.|.+.+... |+.+-
T Consensus       120 ~~p~~~~~~~vYGlc~y~~~~~g~~~afv~~k~G~v~q~~l~~~~~g~v~~~lvr~f~-~~~q~EGCVvDde~~~LyisE  198 (353)
T d1h6la_         120 NRPIASAIDEVYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNADKNGYISGKKVRAFK-MNSQTEGMAADDEYGSLYIAE  198 (353)
T ss_dssp             SSCEECSSSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSSEEEEEEEEEE-CSSCEEEEEEETTTTEEEEEE
T ss_pred             ccccccccCcceEEEEEecCCCCeEEEEEEcCCceEEEEEEEcCCCCceeeEeeeccC-CCCccceEEEeCCCCcEEEec
Confidence                   123566666     244 5667778899988864   221       2222 234677788887765 77887


Q ss_pred             cCCcEEEEecCCCCcchhH-----HHhcccceeEEEec---cCCCceeEEEEeCCCcEEEEecCC
Q psy7057         216 SDGIVRVFSANPDRQAEDA-----VQAQYAEEVKKLKS---ANEQEIGGVKVSDDGIVRVFSANP  272 (557)
Q Consensus       216 ~Dg~I~iwd~~~~~~~~~~-----~~~~~~~~v~~l~~---~~~~~~~~vs~s~DG~IrvW~~~~  272 (557)
                      ++.-|..++.+........     ........+..+..   .......++|.-.|++..||+..+
T Consensus       199 E~~Giw~~~a~~~~~~~~~~i~~~~g~~l~~D~EGlaiy~~~~~~GylivSsQG~n~f~vydr~~  263 (353)
T d1h6la_         199 EDEAIWKFSAEPDGGSNGTVIDRADGRHLTPDIEGLTIYYAADGKGYLLASSQGNSSYAIYERQG  263 (353)
T ss_dssp             TTTEEEEEESSTTSCSCCEEEEECSSSSCCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESST
T ss_pred             CccceEEEEeccCCCccceeeecccCccccCCccccEEEEcCCCCeEEEEEcCCCCeEEEEecCC
Confidence            7766655555432211110     01123344444432   222334445555789999999765